Query 008210
Match_columns 574
No_of_seqs 165 out of 2071
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 20:54:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008210.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008210hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 1.3E-45 2.8E-50 393.3 41.6 505 8-560 23-562 (591)
2 TIGR00890 2A0111 Oxalate/Forma 100.0 1.5E-31 3.3E-36 277.0 31.2 368 10-543 1-375 (377)
3 KOG2504 Monocarboxylate transp 100.0 3.9E-32 8.4E-37 288.0 26.1 426 9-550 42-476 (509)
4 PRK09705 cynX putative cyanate 100.0 8E-30 1.7E-34 266.6 34.5 359 28-557 25-388 (393)
5 PRK09556 uhpT sugar phosphate 100.0 2.5E-30 5.4E-35 276.6 30.9 408 12-550 28-449 (467)
6 TIGR00892 2A0113 monocarboxyla 100.0 8.5E-30 1.8E-34 271.2 31.8 395 9-544 15-415 (455)
7 PRK11551 putative 3-hydroxyphe 100.0 2.5E-29 5.3E-34 264.2 32.7 384 2-548 4-394 (406)
8 PRK11663 regulatory protein Uh 100.0 1.4E-28 3E-33 260.7 34.3 375 28-547 39-421 (434)
9 TIGR01299 synapt_SV2 synaptic 100.0 1.4E-28 3.1E-33 270.5 33.9 438 8-554 162-737 (742)
10 PRK11273 glpT sn-glycerol-3-ph 100.0 2.5E-28 5.3E-33 260.1 33.5 414 9-564 25-449 (452)
11 COG2271 UhpC Sugar phosphate p 100.0 5.3E-29 1.1E-33 246.7 25.3 401 10-554 26-438 (448)
12 COG2223 NarK Nitrate/nitrite t 100.0 9.2E-29 2E-33 245.6 26.5 374 8-553 9-404 (417)
13 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.8E-28 6E-33 256.4 31.4 391 9-538 4-409 (412)
14 PRK14995 methyl viologen resis 100.0 1.1E-27 2.5E-32 257.7 36.7 398 11-504 4-413 (495)
15 PRK03545 putative arabinose tr 100.0 1.4E-27 3.1E-32 249.5 35.9 368 9-550 5-380 (390)
16 PRK12307 putative sialic acid 100.0 7.5E-28 1.6E-32 254.6 32.8 368 1-505 6-384 (426)
17 TIGR00903 2A0129 major facilit 100.0 6.7E-28 1.5E-32 248.8 30.1 351 27-546 6-361 (368)
18 PRK15034 nitrate/nitrite trans 100.0 3E-27 6.4E-32 246.2 32.8 387 12-553 33-457 (462)
19 COG2814 AraJ Arabinose efflux 100.0 2.2E-26 4.7E-31 231.6 36.7 374 7-552 7-388 (394)
20 TIGR00893 2A0114 d-galactonate 100.0 3.3E-27 7.1E-32 245.8 31.7 378 28-547 10-396 (399)
21 TIGR00891 2A0112 putative sial 100.0 4.8E-27 1E-31 246.2 31.8 378 3-505 2-391 (405)
22 PRK03699 putative transporter; 100.0 1.3E-26 2.8E-31 242.6 34.7 374 9-554 3-384 (394)
23 PRK05122 major facilitator sup 100.0 1.3E-26 2.8E-31 243.0 34.2 348 31-549 35-388 (399)
24 PRK10642 proline/glycine betai 100.0 9.1E-27 2E-31 250.5 32.3 357 12-505 15-405 (490)
25 PLN00028 nitrate transmembrane 100.0 1.1E-26 2.4E-31 248.6 32.2 366 27-550 51-433 (476)
26 TIGR00879 SP MFS transporter, 100.0 8.6E-27 1.9E-31 249.3 30.6 399 30-554 46-474 (481)
27 TIGR00894 2A0114euk Na(+)-depe 100.0 6.4E-27 1.4E-31 250.4 28.6 399 7-548 13-448 (465)
28 PRK10406 alpha-ketoglutarate t 100.0 4.7E-26 1E-30 241.2 34.0 378 9-549 18-423 (432)
29 PRK12382 putative transporter; 100.0 9E-26 2E-30 236.1 35.6 347 33-548 37-387 (392)
30 PRK10504 putative transporter; 100.0 2.8E-25 6E-30 238.2 38.7 383 28-506 26-417 (471)
31 TIGR00712 glpT glycerol-3-phos 100.0 3.7E-26 8E-31 242.5 31.5 402 11-554 25-437 (438)
32 PRK10077 xylE D-xylose transpo 100.0 6.2E-26 1.3E-30 243.7 33.3 418 11-556 10-463 (479)
33 PRK10213 nepI ribonucleoside t 100.0 2E-25 4.3E-30 233.3 36.1 347 7-505 14-367 (394)
34 TIGR00887 2A0109 phosphate:H+ 100.0 5E-26 1.1E-30 245.6 32.3 425 9-555 12-493 (502)
35 PRK03893 putative sialic acid 100.0 5.2E-25 1.1E-29 237.6 37.6 396 8-505 15-429 (496)
36 PRK09952 shikimate transporter 99.9 2.6E-25 5.7E-30 235.8 33.0 378 9-549 18-432 (438)
37 TIGR00711 efflux_EmrB drug res 99.9 2.2E-25 4.7E-30 239.8 32.8 382 28-505 18-411 (485)
38 PF06813 Nodulin-like: Nodulin 99.9 4.5E-26 9.8E-31 217.8 24.2 247 11-257 1-249 (250)
39 TIGR00898 2A0119 cation transp 99.9 2.3E-26 5.1E-31 248.7 24.9 381 28-548 105-493 (505)
40 PRK10091 MFS transport protein 99.9 9.7E-25 2.1E-29 227.4 33.7 346 28-546 19-372 (382)
41 PRK03633 putative MFS family t 99.9 8.7E-25 1.9E-29 227.7 32.9 340 28-543 22-365 (381)
42 PRK15402 multidrug efflux syst 99.9 8.3E-25 1.8E-29 229.9 32.9 359 1-505 1-371 (406)
43 TIGR00897 2A0118 polyol permea 99.9 1.5E-24 3.3E-29 227.5 34.4 355 34-549 35-400 (402)
44 PRK15075 citrate-proton sympor 99.9 1.4E-24 3E-29 230.2 33.7 351 8-505 10-395 (434)
45 TIGR00895 2A0115 benzoate tran 99.9 2.5E-25 5.4E-30 232.4 27.3 376 7-501 11-397 (398)
46 TIGR00881 2A0104 phosphoglycer 99.9 1.1E-25 2.3E-30 233.4 23.2 354 27-505 10-373 (379)
47 TIGR00900 2A0121 H+ Antiporter 99.9 8.8E-25 1.9E-29 225.4 28.5 336 33-504 20-363 (365)
48 PRK09874 drug efflux system pr 99.9 3E-24 6.4E-29 225.7 33.0 379 1-548 1-396 (408)
49 PRK10489 enterobactin exporter 99.9 1.8E-24 3.9E-29 228.2 28.9 361 31-553 36-402 (417)
50 PRK11646 multidrug resistance 99.9 1E-23 2.3E-28 220.8 34.3 353 1-505 1-360 (400)
51 TIGR00896 CynX cyanate transpo 99.9 3.1E-24 6.7E-29 221.4 29.3 328 28-505 16-349 (355)
52 TIGR00885 fucP L-fucose:H+ sym 99.9 1.6E-23 3.4E-28 219.7 33.6 356 24-505 14-382 (410)
53 TIGR00710 efflux_Bcr_CflA drug 99.9 1.4E-23 3E-28 218.6 32.7 329 28-503 21-360 (385)
54 PRK10133 L-fucose transporter; 99.9 3.5E-23 7.7E-28 219.0 34.4 343 28-505 42-408 (438)
55 PRK11043 putative transporter; 99.9 6.8E-23 1.5E-27 215.0 33.6 345 12-504 6-357 (401)
56 TIGR00899 2A0120 sugar efflux 99.9 5.5E-23 1.2E-27 213.4 32.5 343 32-546 18-370 (375)
57 cd06174 MFS The Major Facilita 99.9 3.3E-23 7E-28 212.2 29.5 327 28-546 15-348 (352)
58 KOG2532 Permease of the major 99.9 4.6E-24 9.9E-29 223.8 22.7 368 39-549 65-446 (466)
59 PRK10054 putative transporter; 99.9 6E-23 1.3E-27 214.7 30.1 346 28-544 24-378 (395)
60 PF07690 MFS_1: Major Facilita 99.9 8.2E-24 1.8E-28 217.2 22.3 328 29-495 13-352 (352)
61 PRK15403 multidrug efflux syst 99.9 2.7E-22 6E-27 210.9 33.9 357 1-504 1-373 (413)
62 KOG0569 Permease of the major 99.9 1.1E-21 2.4E-26 203.4 37.5 391 37-558 44-462 (485)
63 PRK10473 multidrug efflux syst 99.9 3.2E-22 7E-27 209.2 34.0 143 28-177 19-163 (392)
64 PRK11195 lysophospholipid tran 99.9 1.1E-21 2.3E-26 205.1 34.4 348 35-550 26-380 (393)
65 PRK11102 bicyclomycin/multidru 99.9 4.5E-22 9.8E-27 206.8 31.1 141 30-177 9-151 (377)
66 TIGR00886 2A0108 nitrite extru 99.9 1.3E-22 2.8E-27 209.9 26.9 339 26-489 15-365 (366)
67 PRK09528 lacY galactoside perm 99.9 3.3E-22 7.2E-27 211.1 29.1 378 10-549 11-402 (420)
68 TIGR00889 2A0110 nucleoside tr 99.9 5.1E-22 1.1E-26 209.0 29.8 188 345-553 202-405 (418)
69 PRK11652 emrD multidrug resist 99.9 2.2E-21 4.8E-26 203.0 34.5 345 11-504 6-360 (394)
70 TIGR00883 2A0106 metabolite-pr 99.9 1.8E-22 4E-27 210.3 25.8 334 28-505 9-376 (394)
71 PRK11010 ampG muropeptide tran 99.9 1.8E-21 4E-26 208.8 34.1 366 21-550 20-403 (491)
72 PF06609 TRI12: Fungal trichot 99.9 3.2E-21 6.9E-26 205.1 33.6 384 31-504 63-467 (599)
73 TIGR00902 2A0127 phenyl propri 99.9 3E-21 6.5E-26 201.1 32.0 324 32-505 24-356 (382)
74 PRK15011 sugar efflux transpor 99.9 7.8E-21 1.7E-25 198.8 35.0 363 9-547 15-388 (393)
75 COG0738 FucP Fucose permease [ 99.9 1.1E-20 2.3E-25 187.0 32.8 356 24-505 24-385 (422)
76 PRK10207 dipeptide/tripeptide 99.9 4.5E-20 9.6E-25 197.3 38.5 398 9-501 10-438 (489)
77 COG2807 CynX Cyanate permease 99.9 4.1E-20 8.8E-25 180.1 32.3 368 10-547 9-382 (395)
78 PRK08633 2-acyl-glycerophospho 99.9 1.8E-20 3.9E-25 222.5 33.9 333 33-502 31-382 (1146)
79 PRK06814 acylglycerophosphoeth 99.9 1E-20 2.2E-25 224.1 31.6 327 37-504 41-396 (1140)
80 PRK11128 putative 3-phenylprop 99.9 4.5E-20 9.7E-25 192.3 31.8 324 32-505 24-356 (382)
81 TIGR00882 2A0105 oligosacchari 99.9 4.6E-20 9.9E-25 193.3 31.3 358 33-546 24-391 (396)
82 KOG2533 Permease of the major 99.9 5.3E-20 1.1E-24 193.6 26.5 329 38-491 72-418 (495)
83 KOG0254 Predicted transporter 99.9 1.6E-19 3.5E-24 195.2 30.7 379 47-558 89-491 (513)
84 PRK11902 ampG muropeptide tran 99.9 4.4E-19 9.6E-24 186.2 32.9 356 23-546 9-386 (402)
85 TIGR00901 2A0125 AmpG-related 99.9 9.8E-20 2.1E-24 187.9 26.7 316 31-487 7-355 (356)
86 TIGR00792 gph sugar (Glycoside 99.9 4.2E-19 9.1E-24 188.4 29.4 334 34-505 22-381 (437)
87 TIGR00924 yjdL_sub1_fam amino 99.9 6.2E-18 1.3E-22 180.7 37.9 405 34-552 33-470 (475)
88 KOG0253 Synaptic vesicle trans 99.8 2.1E-19 4.6E-24 174.0 23.0 420 9-556 74-525 (528)
89 KOG0252 Inorganic phosphate tr 99.8 1.4E-20 3E-25 187.8 14.2 388 44-558 81-505 (538)
90 KOG1330 Sugar transporter/spin 99.8 7E-21 1.5E-25 190.9 11.8 149 8-163 28-179 (493)
91 KOG3764 Vesicular amine transp 99.8 7.9E-20 1.7E-24 179.4 17.8 343 40-551 99-455 (464)
92 PRK09584 tppB putative tripept 99.8 3.1E-17 6.7E-22 176.4 38.0 419 28-554 37-483 (500)
93 TIGR02718 sider_RhtX_FptX side 99.8 1.6E-17 3.4E-22 173.7 33.9 361 20-544 8-385 (390)
94 PF05977 MFS_3: Transmembrane 99.8 9.3E-18 2E-22 179.3 30.8 352 38-549 36-393 (524)
95 PF00083 Sugar_tr: Sugar (and 99.8 8.8E-24 1.9E-28 225.3 -17.1 377 47-558 46-444 (451)
96 TIGR00806 rfc RFC reduced fola 99.8 9.7E-18 2.1E-22 171.8 27.0 159 10-177 23-185 (511)
97 KOG2563 Permease of the major 99.8 5.6E-18 1.2E-22 169.6 21.9 406 6-555 38-455 (480)
98 KOG4686 Predicted sugar transp 99.8 4.3E-19 9.2E-24 165.9 12.8 346 32-505 64-415 (459)
99 KOG0255 Synaptic vesicle trans 99.8 1.9E-17 4.1E-22 179.8 27.0 349 40-501 111-465 (521)
100 PRK15462 dipeptide/tripeptide 99.8 1.1E-14 2.3E-19 154.0 37.9 174 11-190 7-187 (493)
101 TIGR00805 oat sodium-independe 99.7 1.1E-17 2.4E-22 184.0 12.7 136 30-165 51-232 (633)
102 PRK09669 putative symporter Ya 99.7 2.9E-15 6.3E-20 159.3 30.0 338 34-505 32-389 (444)
103 PRK09848 glucuronide transport 99.7 2.2E-15 4.9E-20 160.4 28.3 156 344-505 221-389 (448)
104 TIGR01301 GPH_sucrose GPH fami 99.7 2.6E-14 5.6E-19 150.5 31.0 179 351-554 258-475 (477)
105 TIGR01272 gluP glucose/galacto 99.7 9.4E-15 2E-19 147.3 26.4 152 346-505 135-291 (310)
106 PF03825 Nuc_H_symport: Nucleo 99.7 1.1E-13 2.4E-18 143.8 32.8 158 344-507 200-367 (400)
107 PRK10429 melibiose:sodium symp 99.7 2.6E-14 5.6E-19 153.2 28.5 342 35-505 30-394 (473)
108 TIGR00788 fbt folate/biopterin 99.7 2.4E-14 5.2E-19 152.7 27.1 357 21-506 34-415 (468)
109 PF01306 LacY_symp: LacY proto 99.7 3.5E-14 7.6E-19 145.0 26.1 184 343-553 212-403 (412)
110 PF13347 MFS_2: MFS/sugar tran 99.6 5.3E-14 1.1E-18 148.9 25.7 340 35-505 25-385 (428)
111 PF11700 ATG22: Vacuole efflux 99.6 1.3E-12 2.8E-17 138.4 34.2 182 343-547 273-465 (477)
112 KOG2615 Permease of the major 99.6 1E-13 2.2E-18 136.0 18.4 110 48-165 69-180 (451)
113 PRK11462 putative transporter; 99.6 2.7E-12 5.9E-17 136.8 30.4 124 36-160 34-165 (460)
114 PF03209 PUCC: PUCC protein; 99.5 4.6E-11 9.9E-16 120.2 32.9 366 35-545 3-393 (403)
115 COG3104 PTR2 Dipeptide/tripept 99.5 7.9E-11 1.7E-15 120.8 30.1 367 42-499 56-451 (498)
116 COG2211 MelB Na+/melibiose sym 99.5 2.8E-11 6.1E-16 125.1 26.1 339 37-505 38-397 (467)
117 COG2270 Permeases of the major 99.4 7.4E-11 1.6E-15 118.4 23.6 177 343-545 244-424 (438)
118 PRK11663 regulatory protein Uh 99.3 1.2E-11 2.6E-16 131.2 15.1 169 352-547 24-195 (434)
119 COG2814 AraJ Arabinose efflux 99.3 3.1E-11 6.8E-16 122.2 13.9 173 352-551 14-189 (394)
120 PRK10504 putative transporter; 99.3 3.2E-11 7E-16 129.4 14.8 173 352-551 11-186 (471)
121 PRK10054 putative transporter; 99.3 4.4E-11 9.5E-16 125.2 14.9 173 352-552 8-184 (395)
122 PF07690 MFS_1: Major Facilita 99.3 2E-11 4.4E-16 125.1 11.3 154 370-550 15-172 (352)
123 TIGR00710 efflux_Bcr_CflA drug 99.3 7.3E-11 1.6E-15 122.7 15.1 158 368-552 22-182 (385)
124 PRK10091 MFS transport protein 99.3 7.1E-11 1.5E-15 123.1 14.3 170 351-547 3-175 (382)
125 PRK10213 nepI ribonucleoside t 99.2 1.1E-10 2.4E-15 122.1 15.2 149 369-544 38-189 (394)
126 PRK03545 putative arabinose tr 99.2 9.3E-11 2E-15 122.6 14.5 150 372-548 30-182 (390)
127 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.2E-10 2.7E-15 122.5 15.1 179 353-552 10-191 (412)
128 TIGR00712 glpT glycerol-3-phos 99.2 1.4E-10 3.1E-15 123.1 14.9 176 350-552 26-208 (438)
129 TIGR00900 2A0121 H+ Antiporter 99.2 7.2E-11 1.6E-15 121.6 12.0 153 370-549 18-178 (365)
130 PRK14995 methyl viologen resis 99.2 1.6E-10 3.4E-15 124.7 15.0 172 354-552 9-184 (495)
131 TIGR00924 yjdL_sub1_fam amino 99.2 1.4E-10 3.1E-15 124.1 14.1 167 352-545 11-187 (475)
132 TIGR00893 2A0114 d-galactonate 99.2 6.7E-11 1.5E-15 122.9 10.9 154 371-551 14-170 (399)
133 PRK03699 putative transporter; 99.2 2.8E-10 6E-15 119.2 15.5 168 352-545 8-178 (394)
134 PRK09584 tppB putative tripept 99.2 3E-10 6.5E-15 122.4 16.0 174 346-546 15-197 (500)
135 TIGR00881 2A0104 phosphoglycer 99.2 8.3E-11 1.8E-15 121.7 11.1 156 370-552 14-173 (379)
136 TIGR01299 synapt_SV2 synaptic 99.2 3.4E-10 7.4E-15 125.6 16.4 160 372-545 188-350 (742)
137 TIGR00711 efflux_EmrB drug res 99.2 1.4E-10 3.1E-15 124.7 13.1 157 369-552 20-179 (485)
138 TIGR00891 2A0112 putative sial 99.2 3.4E-10 7.4E-15 118.4 15.3 164 354-542 15-181 (405)
139 PRK11551 putative 3-hydroxyphe 99.2 4.4E-10 9.5E-15 118.0 15.7 154 372-552 36-192 (406)
140 PRK09874 drug efflux system pr 99.2 4.3E-10 9.3E-15 118.1 15.4 172 352-551 15-194 (408)
141 PRK10473 multidrug efflux syst 99.2 4.1E-10 8.8E-15 117.8 15.0 156 370-552 22-180 (392)
142 PRK15403 multidrug efflux syst 99.2 4.9E-10 1.1E-14 118.0 15.5 158 368-552 33-193 (413)
143 COG2271 UhpC Sugar phosphate p 99.2 1.5E-10 3.3E-15 116.0 10.6 157 370-553 48-209 (448)
144 TIGR00903 2A0129 major facilit 99.2 3E-10 6.6E-15 117.4 13.4 155 370-552 10-167 (368)
145 PRK15462 dipeptide/tripeptide 99.2 5.2E-10 1.1E-14 118.6 15.2 168 352-546 10-185 (493)
146 PRK11646 multidrug resistance 99.2 3.3E-10 7.2E-15 118.8 13.4 167 354-548 13-183 (400)
147 KOG2325 Predicted transporter/ 99.1 5.8E-09 1.3E-13 108.3 22.0 156 6-164 27-188 (488)
148 PRK11195 lysophospholipid tran 99.1 3.1E-10 6.7E-15 118.7 12.9 147 350-504 2-150 (393)
149 TIGR00895 2A0115 benzoate tran 99.1 3.9E-10 8.4E-15 117.6 13.1 154 370-550 36-192 (398)
150 PLN00028 nitrate transmembrane 99.1 6.4E-10 1.4E-14 119.3 14.9 161 370-549 55-218 (476)
151 PRK11102 bicyclomycin/multidru 99.1 4.7E-10 1E-14 116.5 13.5 156 370-552 10-168 (377)
152 PRK12307 putative sialic acid 99.1 1E-09 2.2E-14 116.1 16.1 141 370-537 37-180 (426)
153 PRK15402 multidrug efflux syst 99.1 1.2E-09 2.7E-14 114.7 16.3 156 369-551 31-189 (406)
154 PRK10207 dipeptide/tripeptide 99.1 6.8E-10 1.5E-14 119.0 14.5 165 352-543 15-187 (489)
155 PRK11652 emrD multidrug resist 99.1 1.1E-09 2.4E-14 114.5 15.8 171 354-551 11-184 (394)
156 PRK10489 enterobactin exporter 99.1 1.9E-10 4E-15 121.4 9.8 174 345-545 11-192 (417)
157 TIGR00886 2A0108 nitrite extru 99.1 1.1E-09 2.4E-14 113.1 15.0 146 352-504 2-152 (366)
158 PRK11273 glpT sn-glycerol-3-ph 99.1 1.1E-09 2.4E-14 116.9 15.4 154 372-552 50-210 (452)
159 TIGR00890 2A0111 Oxalate/Forma 99.1 6.4E-10 1.4E-14 114.9 13.3 154 369-550 21-177 (377)
160 PRK10642 proline/glycine betai 99.1 2.9E-09 6.3E-14 114.8 18.6 168 28-199 266-437 (490)
161 PRK15011 sugar efflux transpor 99.1 4.2E-09 9.1E-14 110.2 19.2 155 31-192 235-391 (393)
162 PRK09556 uhpT sugar phosphate 99.1 8.5E-10 1.8E-14 118.2 13.8 156 370-549 48-211 (467)
163 TIGR00897 2A0118 polyol permea 99.1 1.5E-09 3.2E-14 114.0 15.3 148 353-505 15-169 (402)
164 cd06174 MFS The Major Facilita 99.1 2.1E-09 4.5E-14 109.8 16.0 163 358-547 6-171 (352)
165 TIGR00892 2A0113 monocarboxyla 99.1 2.1E-09 4.5E-14 114.7 16.4 152 370-549 38-193 (455)
166 PRK09705 cynX putative cyanate 99.1 2.5E-09 5.4E-14 111.9 16.6 146 370-542 28-176 (393)
167 TIGR00880 2_A_01_02 Multidrug 99.1 3E-09 6.6E-14 93.0 13.9 126 58-190 9-136 (141)
168 PRK03893 putative sialic acid 99.1 1.8E-09 3.8E-14 116.7 15.0 147 352-504 21-170 (496)
169 PF06609 TRI12: Fungal trichot 99.1 2.5E-09 5.4E-14 114.7 15.4 175 349-551 38-218 (599)
170 PRK09528 lacY galactoside perm 99.1 1.7E-09 3.7E-14 114.2 13.8 175 347-551 6-192 (420)
171 PF05631 DUF791: Protein of un 99.0 1.8E-08 3.8E-13 100.2 19.6 97 30-134 52-150 (354)
172 PRK15034 nitrate/nitrite trans 99.0 5E-09 1.1E-13 110.0 16.2 186 351-551 34-233 (462)
173 PF03137 OATP: Organic Anion T 99.0 2.9E-11 6.3E-16 130.0 -0.6 133 32-164 23-200 (539)
174 PRK11043 putative transporter; 99.0 3.4E-09 7.3E-14 111.2 15.0 151 372-549 27-180 (401)
175 PRK03633 putative MFS family t 99.0 4E-09 8.7E-14 109.9 14.9 149 350-504 5-156 (381)
176 TIGR00899 2A0120 sugar efflux 99.0 1.2E-08 2.6E-13 105.7 18.1 149 36-191 224-373 (375)
177 PRK05122 major facilitator sup 99.0 2.8E-09 6E-14 111.7 13.1 147 352-504 16-174 (399)
178 TIGR00882 2A0105 oligosacchari 99.0 4.6E-09 9.9E-14 110.0 14.7 169 350-548 1-181 (396)
179 TIGR00880 2_A_01_02 Multidrug 99.0 1.6E-09 3.5E-14 94.7 9.5 131 392-549 6-137 (141)
180 PRK12382 putative transporter; 99.0 3.3E-09 7.2E-14 110.9 13.5 149 350-504 14-174 (392)
181 TIGR00879 SP MFS transporter, 99.0 3.5E-09 7.5E-14 113.1 13.7 134 385-545 72-212 (481)
182 PF03092 BT1: BT1 family; Int 99.0 3.2E-07 6.9E-12 96.9 28.3 131 33-166 11-149 (433)
183 TIGR00889 2A0110 nucleoside tr 99.0 1.8E-08 3.8E-13 106.3 17.4 159 33-194 229-405 (418)
184 TIGR00894 2A0114euk Na(+)-depe 99.0 2.7E-09 5.8E-14 114.3 11.2 140 385-550 77-219 (465)
185 PRK10077 xylE D-xylose transpo 99.0 1E-08 2.2E-13 110.2 15.7 143 385-546 56-211 (479)
186 KOG2816 Predicted transporter 98.9 1.9E-07 4E-12 98.3 22.5 117 385-508 278-396 (463)
187 KOG1330 Sugar transporter/spin 98.9 1E-09 2.2E-14 111.2 5.2 174 355-554 37-213 (493)
188 TIGR00896 CynX cyanate transpo 98.9 2.1E-08 4.6E-13 103.3 14.4 128 370-504 19-148 (355)
189 KOG3764 Vesicular amine transp 98.9 6.2E-09 1.3E-13 103.4 9.4 143 385-554 107-251 (464)
190 KOG2615 Permease of the major 98.9 1.4E-08 3.1E-13 100.3 11.0 111 386-503 70-181 (451)
191 PRK10406 alpha-ketoglutarate t 98.9 5.1E-08 1.1E-12 103.4 16.2 134 389-541 68-210 (432)
192 TIGR00806 rfc RFC reduced fola 98.9 5.6E-08 1.2E-12 100.6 15.4 157 373-555 48-208 (511)
193 TIGR00902 2A0127 phenyl propri 98.9 1.2E-07 2.6E-12 98.8 18.4 137 34-178 227-366 (382)
194 PF01770 Folate_carrier: Reduc 98.8 4.4E-06 9.4E-11 85.6 28.8 163 23-193 15-183 (412)
195 TIGR00885 fucP L-fucose:H+ sym 98.8 4.5E-08 9.8E-13 102.9 15.0 127 372-504 24-156 (410)
196 PTZ00207 hypothetical protein; 98.8 5E-08 1.1E-12 105.4 15.3 149 372-550 48-205 (591)
197 PRK09952 shikimate transporter 98.8 1.1E-07 2.4E-12 100.9 17.5 130 392-540 72-210 (438)
198 PRK15075 citrate-proton sympor 98.8 8.2E-08 1.8E-12 101.9 16.4 141 356-502 20-177 (434)
199 TIGR00883 2A0106 metabolite-pr 98.8 4.9E-08 1.1E-12 101.4 13.4 145 28-175 235-384 (394)
200 COG2223 NarK Nitrate/nitrite t 98.8 4.2E-08 9.1E-13 98.8 11.1 152 375-552 38-195 (417)
201 TIGR00887 2A0109 phosphate:H+ 98.8 7.2E-08 1.6E-12 104.3 14.0 112 386-503 58-176 (502)
202 PRK11010 ampG muropeptide tran 98.8 1.5E-07 3.2E-12 101.5 15.9 172 349-547 10-192 (491)
203 PF05977 MFS_3: Transmembrane 98.8 7.7E-08 1.7E-12 103.4 13.4 173 345-544 4-184 (524)
204 TIGR00898 2A0119 cation transp 98.8 6.1E-08 1.3E-12 105.0 12.8 144 373-546 111-260 (505)
205 PRK06814 acylglycerophosphoeth 98.7 8E-08 1.7E-12 114.5 14.2 157 346-504 6-170 (1140)
206 PRK10133 L-fucose transporter; 98.7 2.1E-07 4.6E-12 98.7 15.1 144 353-502 28-177 (438)
207 PRK11902 ampG muropeptide tran 98.7 1.9E-07 4.1E-12 98.0 14.0 148 370-544 18-176 (402)
208 TIGR00805 oat sodium-independe 98.7 3.5E-08 7.6E-13 109.1 8.2 128 372-505 54-235 (633)
209 KOG0255 Synaptic vesicle trans 98.7 1.5E-07 3.2E-12 102.4 13.0 130 386-545 120-250 (521)
210 PRK08633 2-acyl-glycerophospho 98.7 1.4E-07 3E-12 112.7 13.8 152 347-504 5-165 (1146)
211 TIGR00901 2A0125 AmpG-related 98.7 4.2E-07 9E-12 93.7 15.1 161 372-552 9-180 (356)
212 COG3104 PTR2 Dipeptide/tripept 98.7 2.8E-07 6E-12 95.1 13.2 145 381-552 56-208 (498)
213 KOG2532 Permease of the major 98.7 1.2E-07 2.7E-12 100.1 10.8 141 385-551 74-217 (466)
214 TIGR01301 GPH_sucrose GPH fami 98.6 2.7E-07 5.9E-12 97.6 13.3 172 370-553 23-221 (477)
215 PRK11128 putative 3-phenylprop 98.6 1.2E-06 2.6E-11 91.3 17.9 128 36-170 229-358 (382)
216 KOG3098 Uncharacterized conser 98.6 9E-06 1.9E-10 84.6 23.9 104 53-164 57-161 (461)
217 TIGR02718 sider_RhtX_FptX side 98.6 2E-06 4.4E-11 89.8 17.4 147 36-183 232-382 (390)
218 PF11700 ATG22: Vacuole efflux 98.5 4E-06 8.7E-11 89.2 16.9 165 26-191 296-467 (477)
219 KOG0254 Predicted transporter 98.5 1E-06 2.2E-11 95.6 12.3 138 387-551 92-230 (513)
220 KOG2533 Permease of the major 98.4 1.5E-06 3.4E-11 92.1 12.1 147 385-552 82-229 (495)
221 KOG4332 Predicted sugar transp 98.4 1.4E-05 3.1E-10 75.4 16.8 102 32-141 57-159 (454)
222 COG2270 Permeases of the major 98.4 3.2E-06 7E-11 85.5 12.6 161 25-192 266-429 (438)
223 KOG2504 Monocarboxylate transp 98.4 3.5E-06 7.7E-11 90.2 13.0 151 373-551 68-222 (509)
224 TIGR01272 gluP glucose/galacto 98.3 8.5E-06 1.8E-10 82.2 14.3 118 41-167 172-290 (310)
225 PF01306 LacY_symp: LacY proto 98.3 1.7E-06 3.7E-11 89.0 9.2 151 348-504 4-164 (412)
226 KOG3626 Organic anion transpor 98.3 8.8E-06 1.9E-10 88.5 14.6 133 32-164 117-296 (735)
227 KOG0569 Permease of the major 98.3 5.8E-06 1.3E-10 86.8 11.9 102 388-495 64-169 (485)
228 TIGR00792 gph sugar (Glycoside 98.3 1.1E-05 2.3E-10 85.6 14.1 117 42-165 253-378 (437)
229 KOG0252 Inorganic phosphate tr 98.2 7.9E-06 1.7E-10 83.2 10.9 106 387-498 87-200 (538)
230 PF03825 Nuc_H_symport: Nucleo 98.2 5.2E-05 1.1E-09 79.1 17.3 144 16-167 214-364 (400)
231 COG2807 CynX Cyanate permease 98.2 3E-05 6.5E-10 77.0 14.1 150 370-546 31-182 (395)
232 PF02487 CLN3: CLN3 protein; 98.2 9.3E-05 2E-09 75.9 18.1 109 387-504 284-396 (402)
233 KOG4686 Predicted sugar transp 98.2 5.7E-05 1.2E-09 72.1 15.1 162 7-179 262-429 (459)
234 PRK09848 glucuronide transport 98.1 3.6E-05 7.7E-10 82.1 14.0 122 38-164 255-385 (448)
235 PRK10429 melibiose:sodium symp 98.0 3.5E-05 7.5E-10 82.8 11.4 127 370-501 25-166 (473)
236 PRK09669 putative symporter Ya 98.0 3.4E-05 7.5E-10 82.1 11.0 161 371-547 29-201 (444)
237 PF00083 Sugar_tr: Sugar (and 98.0 1.8E-07 3.9E-12 99.7 -6.7 135 386-544 48-186 (451)
238 PF06813 Nodulin-like: Nodulin 98.0 0.00017 3.7E-09 69.6 14.0 129 368-504 19-157 (250)
239 PF13347 MFS_2: MFS/sugar tran 97.9 0.00011 2.4E-09 77.8 13.6 121 38-164 252-381 (428)
240 COG0738 FucP Fucose permease [ 97.9 0.00044 9.5E-09 69.9 15.2 126 373-504 35-166 (422)
241 PF03209 PUCC: PUCC protein; 97.8 0.00039 8.5E-09 70.7 14.4 126 378-505 7-152 (403)
242 COG0477 ProP Permeases of the 97.8 0.00047 1E-08 68.0 15.1 126 33-163 23-154 (338)
243 TIGR00926 2A1704 Peptide:H+ sy 97.8 0.00046 1E-08 76.2 15.3 154 374-548 10-180 (654)
244 TIGR00788 fbt folate/biopterin 97.7 0.00042 9.1E-09 74.2 13.9 166 354-544 29-203 (468)
245 PRK11462 putative transporter; 97.7 0.00039 8.5E-09 74.3 12.9 131 372-504 30-172 (460)
246 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.012 2.5E-07 65.3 24.5 153 33-187 9-177 (654)
247 KOG0253 Synaptic vesicle trans 97.6 0.00016 3.5E-09 71.8 7.6 121 63-192 398-519 (528)
248 PF05631 DUF791: Protein of un 97.6 0.0024 5.2E-08 64.0 15.8 151 377-552 60-218 (354)
249 PF05978 UNC-93: Ion channel r 97.6 0.0014 3E-08 58.4 12.2 98 59-164 50-148 (156)
250 KOG3762 Predicted transporter 97.5 0.00019 4.1E-09 74.8 7.4 136 389-551 411-548 (618)
251 TIGR00769 AAA ADP/ATP carrier 97.5 0.2 4.3E-06 53.2 31.8 130 35-164 26-188 (472)
252 COG2211 MelB Na+/melibiose sym 97.5 0.00099 2.1E-08 69.7 11.9 162 371-547 32-204 (467)
253 TIGR00939 2a57 Equilibrative N 97.4 0.0081 1.8E-07 63.3 18.2 111 387-502 310-431 (437)
254 KOG2816 Predicted transporter 97.4 0.0017 3.6E-08 68.7 13.0 135 393-558 71-207 (463)
255 KOG2325 Predicted transporter/ 97.3 0.0037 8.1E-08 65.6 14.1 189 352-554 35-233 (488)
256 PF06779 DUF1228: Protein of u 97.3 0.00061 1.3E-08 53.4 6.2 70 25-94 4-75 (85)
257 PF05978 UNC-93: Ion channel r 97.3 0.003 6.6E-08 56.2 10.9 109 388-502 41-149 (156)
258 KOG3810 Micronutrient transpor 97.2 0.0021 4.6E-08 63.5 10.1 130 30-167 23-156 (433)
259 PF06963 FPN1: Ferroportin1 (F 97.0 0.61 1.3E-05 49.0 29.7 157 344-504 252-417 (432)
260 KOG3762 Predicted transporter 96.9 0.0039 8.4E-08 65.3 8.7 146 40-192 399-547 (618)
261 PF12832 MFS_1_like: MFS_1 lik 96.8 0.0028 6E-08 49.1 5.6 56 31-86 19-75 (77)
262 KOG3574 Acetyl-CoA transporter 96.8 0.12 2.6E-06 52.1 18.1 129 23-157 41-185 (510)
263 COG0477 ProP Permeases of the 96.7 0.047 1E-06 53.5 15.2 126 373-504 24-158 (338)
264 KOG2563 Permease of the major 96.6 0.02 4.4E-07 58.9 11.6 114 386-505 81-203 (480)
265 PF03092 BT1: BT1 family; Int 96.5 0.032 7E-07 59.0 13.1 148 379-552 18-177 (433)
266 KOG0637 Sucrose transporter an 96.5 0.097 2.1E-06 54.1 15.4 128 33-160 53-198 (498)
267 PF12832 MFS_1_like: MFS_1 lik 96.4 0.0083 1.8E-07 46.5 5.8 47 368-414 17-65 (77)
268 PF13000 Acatn: Acetyl-coenzym 95.6 3.8 8.2E-05 43.4 26.2 55 449-504 413-467 (544)
269 KOG1479 Nucleoside transporter 95.4 3.8 8.2E-05 42.3 23.6 107 388-501 286-401 (406)
270 PF00854 PTR2: POT family; In 95.3 0.073 1.6E-06 55.1 8.8 106 421-548 3-121 (372)
271 PF03137 OATP: Organic Anion T 95.2 0.005 1.1E-07 66.8 -0.3 176 372-553 24-253 (539)
272 KOG1237 H+/oligopeptide sympor 95.0 6.8 0.00015 42.9 25.2 152 8-159 32-212 (571)
273 PF03219 TLC: TLC ATP/ADP tran 94.8 5.8 0.00013 42.5 21.4 60 36-95 44-108 (491)
274 PRK03612 spermidine synthase; 94.3 1.2 2.7E-05 48.2 15.4 112 386-503 52-170 (521)
275 TIGR00769 AAA ADP/ATP carrier 94.3 0.63 1.4E-05 49.5 12.8 48 456-504 143-191 (472)
276 PF01770 Folate_carrier: Reduc 94.3 1.5 3.2E-05 45.5 15.1 158 371-554 23-186 (412)
277 KOG3626 Organic anion transpor 93.8 0.13 2.7E-06 56.9 6.5 173 374-555 120-348 (735)
278 PF00854 PTR2: POT family; In 93.7 0.54 1.2E-05 48.6 10.9 116 77-192 2-123 (372)
279 PRK03612 spermidine synthase; 93.5 3.6 7.9E-05 44.6 17.2 153 38-192 41-198 (521)
280 KOG3098 Uncharacterized conser 92.3 0.42 9.1E-06 50.3 7.6 100 390-495 56-155 (461)
281 PF01733 Nucleoside_tran: Nucl 90.4 0.092 2E-06 52.9 0.4 100 389-495 187-301 (309)
282 PF06779 DUF1228: Protein of u 90.0 1 2.2E-05 35.4 5.9 67 370-441 11-79 (85)
283 KOG3574 Acetyl-CoA transporter 89.1 6.5 0.00014 40.2 12.0 141 352-497 32-188 (510)
284 PF06963 FPN1: Ferroportin1 (F 87.9 11 0.00024 39.7 13.6 117 40-156 286-407 (432)
285 KOG1237 H+/oligopeptide sympor 83.1 12 0.00026 41.1 11.6 154 368-548 54-243 (571)
286 KOG0637 Sucrose transporter an 80.0 3.3 7.1E-05 43.2 5.5 123 371-498 52-199 (498)
287 PF02487 CLN3: CLN3 protein; 78.4 33 0.00073 35.7 12.3 117 43-164 277-394 (402)
288 COG5336 Uncharacterized protei 67.5 19 0.0004 29.4 5.7 33 473-506 38-70 (116)
289 KOG1479 Nucleoside transporter 66.3 1.7E+02 0.0037 30.5 15.2 47 368-414 35-82 (406)
290 PF07672 MFS_Mycoplasma: Mycop 64.0 1.5E+02 0.0032 28.9 14.8 21 342-362 85-105 (267)
291 KOG4332 Predicted sugar transp 60.8 14 0.00029 36.0 4.5 63 401-470 89-154 (454)
292 PF13000 Acatn: Acetyl-coenzym 57.4 72 0.0016 34.2 9.5 38 464-502 141-178 (544)
293 PF03219 TLC: TLC ATP/ADP tran 52.8 1.6E+02 0.0036 31.6 11.7 42 461-503 164-205 (491)
294 KOG3880 Predicted small molecu 50.0 1.8E+02 0.004 29.2 10.3 49 448-497 349-397 (409)
295 PF11299 DUF3100: Protein of u 49.1 27 0.0006 32.9 4.4 91 63-157 124-222 (241)
296 TIGR00939 2a57 Equilibrative N 47.7 3.5E+02 0.0076 28.6 13.2 40 447-491 112-151 (437)
297 KOG3097 Predicted membrane pro 42.7 31 0.00068 34.6 4.0 70 394-468 68-137 (390)
298 COG4262 Predicted spermidine s 39.3 4.4E+02 0.0096 27.0 12.9 115 384-501 43-162 (508)
299 PF06123 CreD: Inner membrane 29.7 6.9E+02 0.015 26.4 11.9 77 401-481 308-385 (430)
300 PRK11715 inner membrane protei 28.7 7.2E+02 0.016 26.3 11.7 77 401-481 314-391 (436)
301 PF06645 SPC12: Microsomal sig 28.2 1.1E+02 0.0023 23.6 4.0 19 528-546 34-52 (76)
302 PF07672 MFS_Mycoplasma: Mycop 28.1 5.8E+02 0.012 24.9 11.1 99 53-157 147-255 (267)
303 PF11299 DUF3100: Protein of u 24.5 1.4E+02 0.003 28.3 4.8 92 402-495 125-223 (241)
304 PF06027 DUF914: Eukaryotic pr 22.1 8.4E+02 0.018 24.8 10.7 16 347-362 126-141 (334)
305 PF11947 DUF3464: Protein of u 20.9 1.9E+02 0.004 25.7 4.6 33 459-491 112-144 (153)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-45 Score=393.27 Aligned_cols=505 Identities=20% Similarity=0.241 Sum_probs=391.1
Q ss_pred ccCcHHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccCCChHHHHHHHHHHH
Q 008210 8 SRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFPPWLVLFIGSLACF 87 (574)
Q Consensus 8 ~~~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~~~ 87 (574)
..+||..+.++++++.+.|..|.++++.+++++++|+|++|++++..........+++.|+++||+|+|+++.++.++++
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999765544444558789999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccC
Q 008210 88 FGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (574)
Q Consensus 88 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~ 167 (574)
+|+++++++..+... ++++.++++|++.|+|.+..++++..++.+|||++||++.|+..++.++|+++.+++...++..
T Consensus 103 iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~ 181 (591)
T PTZ00207 103 LGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988776554433 3689999999999999999999999999999999999999999999999999988888877766
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcccCCCCCC--C----CCC---------------CCc--chhhHHHHHHHHHHHHHH
Q 008210 168 SSSKLLLVLAVGVPAVCLVMMYFVRPCTPASG--E----DSA---------------APS--HFLFTQAASVVLGFFLLT 224 (574)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~---------------~~~--~~~~~~~~~~~~~~~~~~ 224 (574)
+.+.+++++++++.+++++...+++.+|.+.. + +++ +.. ++.+.....+.+++|+.+
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~ 261 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPL 261 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHH
Confidence 66677888888888888888888887763321 0 011 111 233334455777888888
Q ss_pred HhhhcccCCCchhhhhhHHHHHH-HHHhhh-hcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCC
Q 008210 225 TTILDHMIPLSASISYASLFIMI-ILLMAP-LAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSS 302 (574)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (574)
..+..++++.++..+..+.++.+ +.+..| +.+|.+. +..++++++ .+ .++.++ . ++ +
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~-~~~~~~~~~-~~---~~~~~~---------~-~~----~-- 320 (591)
T PTZ00207 262 QGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT-FDGKRPHDD-SD---GKAKEH---------V-EA----G-- 320 (591)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCcCCC-cc---cccccc---------c-cc----c--
Confidence 88888888887888777777665 666677 6677653 221111100 00 000000 0 00 0
Q ss_pred CCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhh-
Q 008210 303 TTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ- 381 (574)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 381 (574)
. +.. +.+... .+.+. +.+.| +...++++.+++.+||.+++.++|..+.++.+++|+.++.+++
T Consensus 321 -------~--~~~-~~~~~~--~~~~~--~~~~P--~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~ 384 (591)
T PTZ00207 321 -------E--EVS-AAEDKV--VETDV--DYIAP--QFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALA 384 (591)
T ss_pred -------c--ccc-cccccc--ccccc--cCCCC--CCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhc
Confidence 0 000 000000 00000 10112 2233899999999999999999999999999999999999998
Q ss_pred CC-chh--h-HHHHHHHHHHhhhhhhhhhhhhhhhcc----ccCchhhHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHh
Q 008210 382 GV-HDT--T-ILLSLFSFCNFVGRLGGGVVSEHFVRK----TIPRTIWMTCTQVIMIITYLLFASSID-GTLYAATALLG 452 (574)
Q Consensus 382 g~-~~~--~-~~~~~~~i~~~ig~~~~G~l~Dr~g~r----~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~l~g 452 (574)
|. .+. . .+++++++++.+||+.+|.++....+| |++|+..+.+..+ +.++.+++....+ ..+++..++.|
T Consensus 385 g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg 463 (591)
T PTZ00207 385 GEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAA 463 (591)
T ss_pred CCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHH
Confidence 87 333 2 378999999999999999999544444 3788888887777 7777777665555 68999999999
Q ss_pred hhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHH
Q 008210 453 ICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITF 532 (574)
Q Consensus 453 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (574)
+++|..++..+.+++|+|+ |+.|+.+.+..++..+|+.++.-.++|.+||++++++ ++..|.|..||+.+|
T Consensus 464 ~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~--------~~~~C~G~~C~~~~~ 534 (591)
T PTZ00207 464 FANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL--------GQDVCTERVCVVMPL 534 (591)
T ss_pred HHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCeeCCceeeHhHH
Confidence 9999999999999999999 9999999999999999999888889999999987653 356899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 008210 533 FVLAGVCCVGSILSIILNIRIRPVYQML 560 (574)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (574)
.+++++++++++++..+..|+|+.+++.
T Consensus 535 ~v~~~~~~~g~~~s~~l~~R~r~~y~~~ 562 (591)
T PTZ00207 535 AFLLGLSFLAFITSTYVHLQYRRLCLKA 562 (591)
T ss_pred HHHHHHHHHHHHHHhheeeehHHHHHHH
Confidence 9999999999999999998988877643
No 2
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.5e-31 Score=277.04 Aligned_cols=368 Identities=20% Similarity=0.256 Sum_probs=272.3
Q ss_pred CcHHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHH
Q 008210 10 PPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFF 88 (574)
Q Consensus 10 ~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~ 88 (574)
++|..+...++..+..+..|.++.+.|++++++|++.++.+++.+...++..+ +++.|.++||+|||+++.++.++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 35777777777777778888999999999999999999999977777777765 99999999999999999999999999
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 008210 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNS 168 (574)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~ 168 (574)
+++++.+. ++++.+++.|++.|++.+..++.....+.+|+|++|+++.++...+.++|..+.+++...+.+..
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE 153 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc
Confidence 97664433 47899999999999999998888888899999999999999999999999988888877776555
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-hcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHH
Q 008210 169 SSKLLLVLAVGVPAVCLVMMY-FVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMI 247 (574)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
+|++.+....+..++..+..+ +.++
T Consensus 154 ~~~~~f~~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 179 (377)
T TIGR00890 154 GVPAAFIYMGIIFLLVIVLGAFLIGY------------------------------------------------------ 179 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHheec------------------------------------------------------
Confidence 677666544433332221111 1110
Q ss_pred HHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcc
Q 008210 248 ILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEG 327 (574)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (574)
+++++ .++. ++
T Consensus 180 -------------------~~~~~--------------------~~~~-----------------~~------------- 190 (377)
T TIGR00890 180 -------------------PPGQL--------------------IKTN-----------------IE------------- 190 (377)
T ss_pred -------------------Cchhc--------------------cccC-----------------cc-------------
Confidence 00000 0000 00
Q ss_pred chhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhh
Q 008210 328 AVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGG 405 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G 405 (574)
...++.+.++.+|++.+|......++..........+.+++.++.|.+ +.+...+...+...++++..|
T Consensus 191 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 261 (377)
T TIGR00890 191 ---------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLG 261 (377)
T ss_pred ---------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011235677888888777766655444333444566677777775 356677888999999999999
Q ss_pred hhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-ch--HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhh
Q 008210 406 VVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DG--TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFL 482 (574)
Q Consensus 406 ~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~--~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 482 (574)
++.||++|| ..+..+.+...++..++...+ .. ..+....+.|++.+...+..+.+++|.+|+++++++.|+.
T Consensus 262 ~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 336 (377)
T TIGR00890 262 ALSDKIGRQ-----KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFL 336 (377)
T ss_pred HHHHHHhhh-----hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHH
Confidence 999999998 445555566666665544332 11 2334456678888887788888999999999999999999
Q ss_pred hhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHH
Q 008210 483 ALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGS 543 (574)
Q Consensus 483 ~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
+....++.. ++|.+.|.+.|+. +|+..|++.+++.++++
T Consensus 337 ~~~~~~g~~-~~~~~~g~l~~~~---------------------g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 337 YTAKAVAGI-FGGLIASHALTEI---------------------GFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHH-HHHHHHHHHHhhh---------------------chhhHHHHHHHHHHHhc
Confidence 999999998 8999999999873 58888888777666653
No 3
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-32 Score=287.99 Aligned_cols=426 Identities=20% Similarity=0.229 Sum_probs=315.7
Q ss_pred cCcHHHHHHHHHHHH-hhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQI-AAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~-~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
-+.|.+++++++.+. ..|..+.++++.+.++++|+-+..+++|+.+...... ..+|+.+.+.||+|.|.+.++|.++.
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~ 121 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVA 121 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHH
Confidence 378999999999886 4599999999999999999999999999766555555 45999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHH-HHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
.+|+++. .++ +++|++++ ++++.|+|.|+.+.++..++..||+|||++|+|+..++.|+|.+++|++...++
T Consensus 122 ~~g~~ls-----sF~--~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 122 ALGLLLS-----SFA--TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHH-----HHH--hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 9997663 333 36888877 699999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHH
Q 008210 166 HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFI 245 (574)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (574)
+..+|+.-......+.+..+.+...+||......+. ++...
T Consensus 195 ~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~-------------------------------------- 235 (509)
T KOG2504|consen 195 SKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDL-------------------------------------- 235 (509)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhh--------------------------------------
Confidence 988787777666666677777777777654433221 00000
Q ss_pred HHHHHhhhhcccccchhcccCCcccccccCCCCCCcc-cc-cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Q 008210 246 MIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDS-VV-RAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLA 323 (574)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (574)
+ .+. .+.++++. .+ ..+++ +.+. .+. ....+. ...
T Consensus 236 -----------------~--~~~------~~~~~~~~~~~~~~~~~---~~~~------------~~~-~~~~~~--~~~ 272 (509)
T KOG2504|consen 236 -----------------R--NSA------ASVESTPKPVELRISER---DSGL------------KKL-SLSNLA--TLK 272 (509)
T ss_pred -----------------c--ccc------ccccccccccccccccC---CCCC------------Ccc-cccchh--hhh
Confidence 0 000 00000000 00 00000 0000 000 000000 000
Q ss_pred hhccchhhhccCCCCCCC-ccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhh
Q 008210 324 EGEGAVRRKKRRPKRGED-FKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVG 400 (574)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig 400 (574)
+.+++. ...+.+... .-..+++|++.|+.+.+...+...+......+++.+.++.|++ +++..+++.++.+.++
T Consensus 273 ~~~~~~---~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~g 349 (509)
T KOG2504|consen 273 RGPDKW---RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIG 349 (509)
T ss_pred hCCccc---cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhh
Confidence 000000 000100000 1125889999999999998888888888888999999998884 6788999999999999
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhh
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLIS 479 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~ 479 (574)
|++.|++.|+...+ +.++..++.+...++.......+.. .++....++|++.|......+.++.|+.+.++...++
T Consensus 350 Ri~~G~laD~~~~~---~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~ 426 (509)
T KOG2504|consen 350 RIILGLLADKPGIR---ALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAY 426 (509)
T ss_pred hhhhhhhcCccccc---hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHH
Confidence 99999999998633 2366666767777766555555444 7778889999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 480 NFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 480 g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
|+......++.. +||++.|+++|.+ +.|...|+.++.+.+++..+.++..
T Consensus 427 Gl~l~~~gi~~l-~gpPiag~~~d~t--------------------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 427 GLLLLFQGIGAL-VGPPIAGLLYDIT--------------------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHhHHHHH-cCcccceeeeecc--------------------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999998 8999999999986 3599999999998888876655544
No 4
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.98 E-value=8e-30 Score=266.55 Aligned_cols=359 Identities=13% Similarity=0.039 Sum_probs=254.4
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.+..+...|.+++|+|+|..+.+++.+.+.++..+ +++.|++.||+|||+++..+.+++.++.+++.+ + +++
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~-----a--~~~ 97 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL-----Y--PQS 97 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH-----C--cch
Confidence 56788999999999999999999977776677655 999999999999999999999999999766433 2 468
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNS-SSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~-~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|+++|+|.+..++....++.+|||++|++++++...+...|..+++.+...+.+.. +|+..+....++.++..
T Consensus 98 ~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 98 ALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 88999999999999998888888999999999999999999888888888888777665432 45554332221111110
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
...+ +..
T Consensus 178 ~~~~-------------------------------------------------------------------~~~------ 184 (393)
T PRK09705 178 FAWW-------------------------------------------------------------------WQS------ 184 (393)
T ss_pred HHHH-------------------------------------------------------------------HHh------
Confidence 0000 000
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+ ++| + + ++ + ++. +.+
T Consensus 185 ~--------------------------~~~----~----------~-~~-----------------~---~~~----~~~ 199 (393)
T PRK09705 185 A--------------------------REV----A----------S-SH-----------------K---TTT----TPV 199 (393)
T ss_pred c--------------------------CCC----c----------c-cc-----------------C---CCc----CCc
Confidence 0 000 0 0 00 0 000 012
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMT 423 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~ 423 (574)
+.++++..|.+.+.+++..........+.|.+.+++|.+ +.+...+++.+++.+|++..|++.||++|| ..+.
T Consensus 200 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~ 274 (393)
T PRK09705 200 RVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLM 274 (393)
T ss_pred ccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHH
Confidence 345667777766666555445555667888888888874 467788899999999999999999999988 4444
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcC-ccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 424 CTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFG-LEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 424 ~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
.+..+..++..++...+.........+.|++.+..++.......+.++ ++++|+.+|+.+....+++. ++|.+.|++.
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~-~gp~~~G~l~ 353 (393)
T PRK09705 275 LALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAG-LAPWFSGVLR 353 (393)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 455555555554332121111223345678888777777666667775 57899999999999999998 8999999999
Q ss_pred hhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 008210 503 DNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIRPVY 557 (574)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (574)
|+. ++|+..|++..+++++..+..+.+.+|++.+.
T Consensus 354 ~~~--------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 354 SIS--------------------GNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHh--------------------CCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 985 34788888888777777666655555555433
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.98 E-value=2.5e-30 Score=276.62 Aligned_cols=408 Identities=13% Similarity=0.052 Sum_probs=257.7
Q ss_pred HHHHHHHHHHHHhh-hccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHH
Q 008210 12 WVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFG 89 (574)
Q Consensus 12 w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g 89 (574)
|..+...++..+.. .....++...|.+++++|++.++.+++.+.+.+++.+ +++.|+++||+|+|+++.++.++.+++
T Consensus 28 ~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 107 (467)
T PRK09556 28 MQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAIC 107 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHH
Confidence 33344434333322 3466788889999999999999999987777777755 999999999999999999998888888
Q ss_pred HHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC-
Q 008210 90 YGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN- 167 (574)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~- 167 (574)
.+.+.....+.. ++++.+++.|++.|++.+...+....++.+||| ++||+++|+...+.++|+++++.+...+...
T Consensus 108 ~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 108 MLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred HHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 666554433333 368999999999999999988899999999998 5899999999999999999988776544321
Q ss_pred --ChhHHHHHH-HHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHH
Q 008210 168 --SSSKLLLVL-AVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLF 244 (574)
Q Consensus 168 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (574)
.+|+..+.. +++..++.++..++.++.|++.+
T Consensus 186 ~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~--------------------------------------------- 220 (467)
T PRK09556 186 FDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELG--------------------------------------------- 220 (467)
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcC---------------------------------------------
Confidence 123333222 21222222222222111110000
Q ss_pred HHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhh
Q 008210 245 IMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAE 324 (574)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (574)
+.++++. .+++ . .+ ++
T Consensus 221 --------------------~~~~~~~--------------------~~~~----~---------~~-~~---------- 236 (467)
T PRK09556 221 --------------------WGKAEEI--------------------FGEP----I---------SE-ED---------- 236 (467)
T ss_pred --------------------CCChhhc--------------------ccCc----c---------ch-hh----------
Confidence 0000000 0000 0 00 00
Q ss_pred hccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhh
Q 008210 325 GEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGR 401 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~ 401 (574)
.+. +++ +....+.-.++.+|+|.+|...+..++..........+.|.|+++ +|++ ++++..+...++..+++
T Consensus 237 --~~~--~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~ 311 (467)
T PRK09556 237 --KET--EST-DMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGS 311 (467)
T ss_pred --hcc--ccc-cCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH
Confidence 000 000 000000011237899999998888777665555566788888865 6885 55677778889999999
Q ss_pred hhhhhhhhhhhccccCchhhHHHHHHHHHHHH--HHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhh
Q 008210 402 LGGGVVSEHFVRKTIPRTIWMTCTQVIMIITY--LLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLI 478 (574)
Q Consensus 402 ~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~--~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~ 478 (574)
+++|+++||++||+ .+........++. +.....+. ..+++...+.|++..+..........|.+|++++|++
T Consensus 312 ~~~G~lsDr~g~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a 386 (467)
T PRK09556 312 LLWGWLSDLANGRR-----ALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVA 386 (467)
T ss_pred HHHHHHHHHHCCCc-----hHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHH
Confidence 99999999999883 2222211222221 22222222 2344555666654333333334567799999999999
Q ss_pred hhhhhhhhhh-HHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 479 SNFLALGNPL-AAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 479 ~g~~~~~~~l-g~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
.|+.++..++ ++. ++|.+.|++.|.+.+.. ...-+...+|+..|++..++.+++.+..+.+.
T Consensus 387 ~gi~~~~g~l~g~~-~~~~~~G~i~~~~~~g~---------~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 387 NGIKGTFAYLFGDS-FAKVGLGMIADPTKNGT---------PIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHHHHHHHHhHH-HHhhhHHHHhccccccc---------ccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 556 89999999999311000 00001124699999998888888876666554
No 6
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=8.5e-30 Score=271.17 Aligned_cols=395 Identities=14% Similarity=0.152 Sum_probs=270.6
Q ss_pred cCcHHHHHHHHHHHHh-hhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQIA-AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~-~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
.++|.++.++++.... .+..+.++.+.|++++++|++.++.+++.+.+.+.. +.+++.|+++||+|||++++.+.+++
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 5679888887776542 344667888999999999999999999655555544 55999999999999999999999888
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHH-HHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
.++++++.++ ++++.+++ .|++.|++.+...++...++.+|||++|+++.|+...+..+|..+++++...+.
T Consensus 95 ~~~~~~~~~~-------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 95 SLGMILASFS-------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred HHHHHHHHHh-------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 8886664332 35677765 579999999977677778888999999999999999999999999999988877
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHH
Q 008210 166 HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFI 245 (574)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (574)
+..+|++.+.+..+..++..+..++.++.+..+..
T Consensus 168 ~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~--------------------------------------------- 202 (455)
T TIGR00892 168 ESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRV--------------------------------------------- 202 (455)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhCCCCccccc---------------------------------------------
Confidence 76678777766655544433333333221100000
Q ss_pred HHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhh
Q 008210 246 MIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEG 325 (574)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (574)
.++++. + ..++ +.. .++ .+.
T Consensus 203 -------------------~~~~~~--~------------------~~~~----~~~------~~~-~~~---------- 222 (455)
T TIGR00892 203 -------------------SKSKSK--E------------------GLPP----DGS------TKK-LSK---------- 222 (455)
T ss_pred -------------------cccccc--c------------------cCCC----CCc------ccc-ccc----------
Confidence 000000 0 0000 000 000 000
Q ss_pred ccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhh
Q 008210 326 EGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLG 403 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~ 403 (574)
++. .+...+....+.+++|.+|......++..........+++.+.++.|++ +.+...++.+++..+++++
T Consensus 223 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~ 295 (455)
T TIGR00892 223 ------KST-AEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPS 295 (455)
T ss_pred ------cch-hhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000001113578899999887776665555555666788888888875 5667888899999999999
Q ss_pred hhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhh
Q 008210 404 GGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFL 482 (574)
Q Consensus 404 ~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 482 (574)
+|++.||...++ ++...+..+.+...+++++... .+...+++..++.|++++...+....++.|.+|++++|.++|+.
T Consensus 296 ~g~l~d~~~~~~-~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 374 (455)
T TIGR00892 296 CGLIAGLKWIRP-HVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLV 374 (455)
T ss_pred HHHHhcccccCH-HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHH
Confidence 999999742220 0112222233333333333332 33345566788889999888888889999999999999999999
Q ss_pred hhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHH
Q 008210 483 ALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 483 ~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (574)
++...++.. +||.++|.+.|.. ++|+..|++.+++.+++.+
T Consensus 375 ~~~~~lg~~-igp~i~G~l~~~~--------------------g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 375 TIVECCAVL-IGPPLAGRLVDAT--------------------KNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHH-ccccceeeeehhc--------------------CCcchHHHHhhHHHHHHHH
Confidence 999999998 9999999999874 2488888887776666554
No 7
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=2.5e-29 Score=264.22 Aligned_cols=384 Identities=13% Similarity=0.056 Sum_probs=264.6
Q ss_pred ccccccccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHH
Q 008210 2 VTLKAGSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVL 79 (574)
Q Consensus 2 ~~~~~~~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~ 79 (574)
+...++.+++|..+..+++..+..+. .+..+...|.+.+++|.+..+.+++.+...++..+ +++.|++.||+|||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 83 (406)
T PRK11551 4 RTSSASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL 83 (406)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Confidence 44456778999999888888877665 67788889999999999999999987777777765 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHH
Q 008210 80 FIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFT 158 (574)
Q Consensus 80 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~ 158 (574)
.++.++..++.+++.+. ++++.+++.|++.|++.+...+....++.+++| ++|++++++...+..+|..+++
T Consensus 84 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 156 (406)
T PRK11551 84 IVSVALFGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALAS 156 (406)
T ss_pred HHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988887775553322 367889999999999999988888899999998 6899999999999999999988
Q ss_pred HHHHHhccCChhHHHHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchh
Q 008210 159 EIYNMLLHNSSSKLLLVLAVGVPAVCLVM-MYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSAS 237 (574)
Q Consensus 159 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (574)
.+...+.+...|++.+.+..+..++..+. ..++++.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------------------------------- 195 (406)
T PRK11551 157 VIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRA----------------------------------------- 195 (406)
T ss_pred HHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChh-----------------------------------------
Confidence 87766655556666555433322222111 111111000
Q ss_pred hhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchH
Q 008210 238 ISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSE 317 (574)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (574)
+.+ .++. ++ ++++
T Consensus 196 -------------------------------~~~--------------------~~~~--------------~~-~~~~- 208 (406)
T PRK11551 196 -------------------------------FAQ--------------------AAGA--------------GK-QRAP- 208 (406)
T ss_pred -------------------------------HHh--------------------ccCc--------------ch-hhhh-
Confidence 000 0000 00 0000
Q ss_pred HHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHH
Q 008210 318 VALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSF 395 (574)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i 395 (574)
. . ....+..+.+..+..+...++..........+.|.+.++.|.+ +.+...+...+
T Consensus 209 -----------~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~ 266 (406)
T PRK11551 209 -----------V--L---------RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNI 266 (406)
T ss_pred -----------h--H---------HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHH
Confidence 0 0 0000000111222333333332222333455678888888874 45677888889
Q ss_pred HHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccc
Q 008210 396 CNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEH 474 (574)
Q Consensus 396 ~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 474 (574)
+..+++++.|++.||+||| ..+..+.+...+++.++... +...+.+...+.|++.++..+....++.|.+|+++
T Consensus 267 ~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 341 (406)
T PRK11551 267 GGALGSLLIGALMDRLRPR-----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV 341 (406)
T ss_pred HHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh
Confidence 9999999999999999988 34444444444554444333 33345556667777777777888889999999999
Q ss_pred hhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHH
Q 008210 475 FGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 475 ~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
+|++.|+.++...+++. ++|.+.|.+.|+. +++...++....+.+++.+..+.
T Consensus 342 ~g~~~g~~~~~~~~g~~-~g~~~~g~l~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 342 RGTGVGAAVAVGRLGSM-AGPLLAGQLLALG--------------------RSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hhhhhhHHHHhhhHHHH-HHhhhHhhhhccC--------------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8999999999874 23666666666666665554443
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.4e-28 Score=260.70 Aligned_cols=375 Identities=14% Similarity=0.108 Sum_probs=248.1
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.+.++.+.|.+.+++|++.++.+++.+...++..+ +++.|++.||+|||+++.++.++++++++++.+. +++
T Consensus 39 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 111 (434)
T PRK11663 39 RKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS-------SSL 111 (434)
T ss_pred hhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH-------hHH
Confidence 55677888999999999999999977777777654 9999999999999999999999999886654332 468
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHH-
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVC- 184 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~- 184 (574)
+.+++.|++.|++.|..++....++.+||| ++||+++++...+.++|..+++.+.+.+.+..+|++.+.+..++.++.
T Consensus 112 ~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 112 WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 889999999999999888888899999998 579999999999999999999998888876667877776554433322
Q ss_pred HHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcc
Q 008210 185 LVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICR 264 (574)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (574)
++..+++++.|.+...
T Consensus 192 ~~~~~~~~~~p~~~~~---------------------------------------------------------------- 207 (434)
T PRK11663 192 LFLCWRLRDKPQAMGL---------------------------------------------------------------- 207 (434)
T ss_pred HHHHHHcCCCHhhcCC----------------------------------------------------------------
Confidence 2222223221110000
Q ss_pred cCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccH
Q 008210 265 KRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKF 344 (574)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (574)
++..+ .++. . ++.+ .+. ++ ++...+..+
T Consensus 208 --~~~~~--------------------~~~~----~------------~~~~----------~~~--~~--~~~~~~~~~ 235 (434)
T PRK11663 208 --PSVGE--------------------WRHD----A------------LELA----------QQQ--EG--AGLSRKEIL 235 (434)
T ss_pred --CCccc--------------------cccc----c------------cccc----------hhc--cc--cCCChhhhH
Confidence 00000 0000 0 0000 000 00 000000011
Q ss_pred -HHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh
Q 008210 345 -TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI 420 (574)
Q Consensus 345 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~ 420 (574)
...++++.+|...+..++.......+..+.|.+.++ .|++ +.+...+.+.+++.++++++|+++||+.+++.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~ 315 (434)
T PRK11663 236 TKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMN 315 (434)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHH
Confidence 135678888988776665544444455678888854 6775 556778888999999999999999998543111111
Q ss_pred -hHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHH
Q 008210 421 -WMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAG 499 (574)
Q Consensus 421 -~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g 499 (574)
...++.....+++..+...+...++......|++.............|.+|++++|++.|+.++...+|+. ++|.+.|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~p~~~g 394 (434)
T PRK11663 316 LIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAA-LSGYPLA 394 (434)
T ss_pred HHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHH-HhcccHH
Confidence 11122222222222222222222223333344432222333456778999999999999999999999998 9999999
Q ss_pred hhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 500 YIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 500 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
++.|.. +|+..|++.+++.+++.+..+
T Consensus 395 ~l~~~~---------------------g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 395 KVLEIW---------------------HWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHhc---------------------ccHHHHHHHHHHHHHHHHHHH
Confidence 999974 488899888887777665444
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=1.4e-28 Score=270.46 Aligned_cols=438 Identities=13% Similarity=0.055 Sum_probs=279.6
Q ss_pred ccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHH
Q 008210 8 SRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLA 85 (574)
Q Consensus 8 ~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~ 85 (574)
.+++|..++.+.+..+..+. ....+...|.++++++++..+.+++.+...++.++ ++++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 35667776666666555555 45567778999999999999999987777788766 99999999999999999999988
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
.+++.+++.++ ++++.++++|++.|+|.|...+....++.+++| ++||+++++...++.+|.++++.+...+
T Consensus 242 ~~i~~ll~afa-------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 242 NGFFAFFSSFV-------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred HHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88886554332 368899999999999999999999999999998 6899999999999999998888776554
Q ss_pred cc-------------CChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhccc
Q 008210 165 LH-------------NSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHM 231 (574)
Q Consensus 165 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (574)
.. ...|++++++..+|.++.++..+++++.|++...+.+.........-
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~------------------ 376 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKL------------------ 376 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHH------------------
Confidence 32 13588998888888888888888887777553321111100000000
Q ss_pred CCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcc-cccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008210 232 IPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSE-SGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFR 310 (574)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (574)
.. ..+++ ...+...... +.++.. . ..++..+.+ +
T Consensus 377 ------------------------------i~-~~n~~~~~~~~~~~~~-~~~~~~-~---~~~~~~~~~---------~ 411 (742)
T TIGR01299 377 ------------------------------IH-DTNMRAKGHPEKVFSV-NHIKTI-H---QEDELIEIE---------S 411 (742)
T ss_pred ------------------------------Hh-cCCCCCcCchhHHHHH-HHHHHh-h---hhhhhhccc---------c
Confidence 00 00000 0000000000 000000 0 000000000 0
Q ss_pred CCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhch---hHHHHHHHHHhhcccceeeeccHHHHHHhh------
Q 008210 311 DNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKA---DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ------ 381 (574)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 381 (574)
+ ..+.. + +....++. .......+++++++.+ ..+.+++..++.......+..|+|.+.+..
T Consensus 412 ~-~~~~~-~------~~~~~~~~--~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~ 481 (742)
T TIGR01299 412 D-TGTWY-Q------RCFVRALS--EGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYA 481 (742)
T ss_pred c-ccchh-h------cchhhhhh--hhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 0 00000000 0000011233333322 234455555555555666677888764331
Q ss_pred ------------------------------------CC------------------------------------------
Q 008210 382 ------------------------------------GV------------------------------------------ 383 (574)
Q Consensus 382 ------------------------------------g~------------------------------------------ 383 (574)
|+
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 561 (742)
T TIGR01299 482 ALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDF 561 (742)
T ss_pred hhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccch
Confidence 00
Q ss_pred ----------------------------c-----hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHH
Q 008210 384 ----------------------------H-----DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMI 430 (574)
Q Consensus 384 ----------------------------~-----~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~ 430 (574)
+ .......+..++.++|.+++|+++||+||| .++.++.++.+
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr-----~~l~~~~~lsa 636 (742)
T TIGR01299 562 EEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL-----RMLAGSMVLSC 636 (742)
T ss_pred hhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHH
Confidence 0 001224456688899999999999999999 66777777777
Q ss_pred HHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhh
Q 008210 431 ITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQ 509 (574)
Q Consensus 431 i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~ 509 (574)
++.+++.... ...+++..++.|++.++.++...++++|.+|++.|++++|+.++...+|++ ++|.+.|.+.+..
T Consensus 637 i~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGai-igp~i~g~L~~~~---- 711 (742)
T TIGR01299 637 ISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAV-LGILIFGSFVGIT---- 711 (742)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh----
Confidence 7766655433 334555566777777778888889999999999999999999999999998 8999999887762
Q ss_pred cccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 510 QGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
....|++++++.++++++.+++ ++++
T Consensus 712 ------------------~~~pf~i~a~~lll~~ll~~~L-PET~ 737 (742)
T TIGR01299 712 ------------------KAAPILFASAALACGGLLALKL-PDTR 737 (742)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHhC-CCCc
Confidence 4567777777777766655544 5544
No 10
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=2.5e-28 Score=260.13 Aligned_cols=414 Identities=13% Similarity=0.083 Sum_probs=260.5
Q ss_pred cCcHHHHHHHHHHHHhhh-ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
+++|..+...++...... ....++...|++.++ |++.++.+++.+...++..+ +++.|+++||+|||+++.++.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 25 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 355766555555443332 244567778889888 99999999977777777654 999999999999999999999988
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHH-Hh
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYN-ML 164 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~-~l 164 (574)
+++++.+.+. .... .+++.+++.|++.|++.|..++.....+.+|+| ++||+++++...+.++|+.+.+++.. .+
T Consensus 104 ~i~~~~~~~~--~~~~-~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 104 AAVMLFMGFV--PWAT-SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred HHHHHHHHhh--hccc-ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 8886654332 1111 256788889999999999888777788899998 57999999999998888765555532 22
Q ss_pred ccCChhHHHHHHHHHHHHH-HHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHH
Q 008210 165 LHNSSSKLLLVLAVGVPAV-CLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASL 243 (574)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
....+|++.+++...+.++ .++..+++++.|++...
T Consensus 181 ~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~------------------------------------------- 217 (452)
T PRK11273 181 AWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL------------------------------------------- 217 (452)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC-------------------------------------------
Confidence 2223566655544333222 22222333221110000
Q ss_pred HHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Q 008210 244 FIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLA 323 (574)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (574)
+++++ . +++.+++ .+
T Consensus 218 ----------------------~~~~~-~----------------~~~~~~~-----------------~~--------- 232 (452)
T PRK11273 218 ----------------------PPIEE-Y----------------KNDYPDD-----------------YN--------- 232 (452)
T ss_pred ----------------------CChhh-h----------------hhccccc-----------------cc---------
Confidence 00000 0 0000000 00
Q ss_pred hhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhh
Q 008210 324 EGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVG 400 (574)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig 400 (574)
++. ++ +...++.-....+|++.+|...+..++..........+.|.++++ .|++ +.+....++.++..++
T Consensus 233 ---~~~--~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g 305 (452)
T PRK11273 233 ---EKH--EQ--ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG 305 (452)
T ss_pred ---ccc--CC--CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 000 00 000000001236788999988777766555445566788998876 5774 4556677788899999
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh--c-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhh
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS--S-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGL 477 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~ 477 (574)
++++|+++||+++++.. ........+..++..++.. . +....++...+.|.+.............|.+|++.+|+
T Consensus 306 ~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~ 383 (452)
T PRK11273 306 TLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGT 383 (452)
T ss_pred HHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhh
Confidence 99999999999543211 1122222223333332222 1 12223333444444333323334456789999999999
Q ss_pred hhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 008210 478 ISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIRPVY 557 (574)
Q Consensus 478 ~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (574)
+.|+.+....+++.+.+|.+.|++.|+. +|+..|++++++++++++....+.+.++|++
T Consensus 384 ~~g~~~~~~~~g~~~~g~~v~g~l~~~~---------------------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 384 AAGFTGLFGYLGGSVAASAIVGYTVDFF---------------------GWDGGFMVMIGGSILAVILLIVVMIGEKRHH 442 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHh---------------------cchHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 9999998888887635899999999984 5899999999888888887777776666666
Q ss_pred HHHhhcc
Q 008210 558 QMLYAGG 564 (574)
Q Consensus 558 ~~~~~~~ 564 (574)
+|..+|+
T Consensus 443 ~~~~~~~ 449 (452)
T PRK11273 443 EELLQKR 449 (452)
T ss_pred HHHHhhh
Confidence 6665555
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.3e-29 Score=246.70 Aligned_cols=401 Identities=16% Similarity=0.105 Sum_probs=283.3
Q ss_pred CcHHHHHHHHHHHHhh-hccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHH
Q 008210 10 PPWVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACF 87 (574)
Q Consensus 10 ~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~ 87 (574)
.||.+++..++-..+. -....|+...|.++++.++|.+|.+++.+++.+.+.+ -.+.|.++||.++|..+.+|.++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 3444454444443332 3466899999999999999999999988887777755 9999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHH--HHh
Q 008210 88 FGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIY--NML 164 (574)
Q Consensus 88 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~--~~l 164 (574)
+..+++++. ++.+.+.+.-++.|.-.|...+++..++.+||| ++||+..++++++.++|+.+.+++. ..+
T Consensus 106 i~nil~Gfs-------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 106 IVNILFGFS-------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHhhh-------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 887775544 367888889999999999999999999999998 5899999999999999999999998 666
Q ss_pred ccCChhHHHHHHHHH-HHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHH
Q 008210 165 LHNSSSKLLLVLAVG-VPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASL 243 (574)
Q Consensus 165 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
....+|+.-+++-.+ ..++++++.+..|+.|++..-
T Consensus 179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL------------------------------------------- 215 (448)
T COG2271 179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL------------------------------------------- 215 (448)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCC-------------------------------------------
Confidence 555566655554333 333333344444433321110
Q ss_pred HHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Q 008210 244 FIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLA 323 (574)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (574)
|..+|++ +|| . +..
T Consensus 216 -------------P~ie~~~-----------------------------~d~-------------------~-e~~---- 229 (448)
T COG2271 216 -------------PPIEEYR-----------------------------GDP-------------------L-EIY---- 229 (448)
T ss_pred -------------CCHHHhh-----------------------------cCc-------------------h-hhh----
Confidence 0000000 000 0 000
Q ss_pred hhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhh
Q 008210 324 EGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVG 400 (574)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig 400 (574)
+++. +++ +...+..-..-+++||..|.+.++.++...+-.++..|.|.|+.+ .|++ ++.+..+++-+++..|
T Consensus 230 --~~~~--~~~-~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G 304 (448)
T COG2271 230 --EEEK--ENE-GLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPG 304 (448)
T ss_pred --hhhc--cCC-CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHH
Confidence 0000 000 011111233457899999999999998888888888999998876 5774 6788999999999999
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC---chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhh
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI---DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGL 477 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~ 477 (574)
.++.||++||+-+.| |....+++++...+++......+ .....+...++|+...+..-++.....|..|++..|+
T Consensus 305 ~Ll~GwlSDklfkgr--R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGt 382 (448)
T COG2271 305 TLLAGWLSDKLFKGR--RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGT 382 (448)
T ss_pred HHHHHHHHHHhcccc--cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccc
Confidence 999999999974331 12334444555555555555332 2344556677777654444667788899999999999
Q ss_pred hhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 478 ISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 478 ~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
+.|+...+..+++...+....|++.|.+ +|...|++..+.++++.++.+.....++
T Consensus 383 A~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~---------------------gW~g~Fi~~~~~a~l~~lll~~~~~~~~ 438 (448)
T COG2271 383 ATGFVGLFAYLIGAALAGLPLGYIADTW---------------------GWDGGFIVLSIAALLAILLLLPVWNAEE 438 (448)
T ss_pred hhchhhhHHHHhhHHhcCCcceeeEecC---------------------CCcchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999944448888889888883 5899999988888888776655544433
No 12
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=9.2e-29 Score=245.61 Aligned_cols=374 Identities=19% Similarity=0.176 Sum_probs=265.3
Q ss_pred ccCcHHHHHHHHHHH-HhhhccchhhcchHHHHhhhCCCHHHHHH-HHHHHHhhhhccccchhccccCCChHHHHHHHHH
Q 008210 8 SRPPWVGLGAAVWVQ-IAAGNAYNFPLYSHSLKSVLGFNQHQLTM-LGVANDIGENVGLLPGLASNKFPPWLVLFIGSLA 85 (574)
Q Consensus 8 ~~~~w~~~~~~~l~~-~~~g~~~~~~~~~~~l~~~l~~s~~~~~~-i~~~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~ 85 (574)
++.++..+..+.+.. .+....+.++.+.+.+++++++|..|.++ .......+.++.++.|.+.||||.|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 456677776666654 45567889999999999999999999999 4666677778899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
..+.++...++. +++++|++++.+++.|++.+ .+......+++||| +++|.|+|+.. ..++|..+...+...+
T Consensus 89 ~~IP~~~~~~a~----~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 89 LLIPCLGLAFAV----TYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHc----cCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 999977765552 23467999999999999865 56789999999999 58999999998 4457766665555443
Q ss_pred ccCCh---hHHHHHHHHHHHHHHHHHH-HhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhh
Q 008210 165 LHNSS---SKLLLVLAVGVPAVCLVMM-YFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISY 240 (574)
Q Consensus 165 ~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (574)
..... |+....+.+++.++..+.. +..++.
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~---------------------------------------------- 196 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV---------------------------------------------- 196 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------------------------------------
Confidence 22111 2222222222222211111 100000
Q ss_pred hHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 008210 241 ASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVAL 320 (574)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (574)
|+ ..+
T Consensus 197 --------------------------p~------------------------~r~------------------------- 201 (417)
T COG2223 197 --------------------------PE------------------------HRA------------------------- 201 (417)
T ss_pred --------------------------hh------------------------hhc-------------------------
Confidence 00 000
Q ss_pred HHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHH
Q 008210 321 LLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCN 397 (574)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~ 397 (574)
+ +++.+..+++.++++++.|.+.+.++...++...+..++|.|+++ +|.+ +++.........+
T Consensus 202 ------------~--~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g 267 (417)
T COG2223 202 ------------S--VKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIG 267 (417)
T ss_pred ------------c--ccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHH
Confidence 0 000111234567789999999999999999989999999999987 5774 5668888899999
Q ss_pred hhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-------Cch-H----HHHHHHHHhhhccchhhhHHHH
Q 008210 398 FVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-------IDG-T----LYAATALLGICYGVQFSIMIPT 465 (574)
Q Consensus 398 ~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~-~----l~~~~~l~g~~~g~~~~~~~~~ 465 (574)
.+.|+++|+|+||+|.+| +.......++++....... .+. . .+....+.|+|.|..|-.+|
T Consensus 268 ~l~Rp~GG~LsDR~Gg~r-----v~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip-- 340 (417)
T COG2223 268 ALARPLGGWLSDRIGGRR-----VTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIP-- 340 (417)
T ss_pred HHHHhccchhhhhccchh-----HHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeech--
Confidence 999999999999999883 4444445555555444422 111 1 22233444566666655555
Q ss_pred HHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHH
Q 008210 466 VSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSIL 545 (574)
Q Consensus 466 ~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (574)
.+|+ ++.|.+.|++...+++|++ +-|...|..+|.+ ++|+..|+++..+.+++.+.
T Consensus 341 --~if~-~~~G~v~G~vga~G~lGGf-~lp~~~g~~~~~t--------------------g~~~~~f~~~~~~~~~a~v~ 396 (417)
T COG2223 341 --VIFP-KETGAVTGIVGAIGGLGGF-FLPLAFGVSLDLT--------------------GSYTGAFMLLLAFYLVALVL 396 (417)
T ss_pred --HHHH-hhhhHHHHHHHHhcccccc-chhHHHHHHHHhc--------------------ccHHHHHHHHHHHHHHHHHH
Confidence 5553 5889999999999999998 8899999999997 35899999999999988887
Q ss_pred HHHHhhhh
Q 008210 546 SIILNIRI 553 (574)
Q Consensus 546 ~~~~~~~~ 553 (574)
.+....|.
T Consensus 397 ~~~~y~r~ 404 (417)
T COG2223 397 TWALYARR 404 (417)
T ss_pred HHHHHHhc
Confidence 76655544
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=2.8e-28 Score=256.43 Aligned_cols=391 Identities=11% Similarity=0.050 Sum_probs=256.9
Q ss_pred cCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
|.+|......++..++... ....+...|.+++|+|++.++++++.+.+.++..+ +++.|++.||+|||+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 3467776666665554444 66777888999999999999999977777777655 999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
.++++++.++ ++++.+++.|++.|++.+..++....++.+|+| ++||+++++...+.++|.++++.+...+.
T Consensus 84 ~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 84 GIASTATMFA-------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHHh-------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887664332 367899999999999999988888888999999 58999999999999999999998887765
Q ss_pred c------CChhHHHHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhh
Q 008210 166 H------NSSSKLLLVLAVGVPAVCLVM-MYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASI 238 (574)
Q Consensus 166 ~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (574)
. ..+||+.+.+..++.++..+. .+++++.|++.. +-..... ..
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~----~l~~~~~-~~------------------------- 206 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK----WLDEEDK-KA------------------------- 206 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCC----CCCHHHH-HH-------------------------
Confidence 3 247888887766555543333 333433332110 0000000 00
Q ss_pred hhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 008210 239 SYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEV 318 (574)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (574)
. +++.+ . .+.+.+++ ++
T Consensus 207 -----------------------~---~~~~~--------------~--~~~~~~~~-----------------~~---- 223 (412)
T TIGR02332 207 -----------------------L---KEMID--------------N--DQLTLEQP-----------------EG---- 223 (412)
T ss_pred -----------------------H---HHHHH--------------h--cccccccc-----------------cc----
Confidence 0 00000 0 00000000 00
Q ss_pred HHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhh--CCc--hhhHHHHHHH
Q 008210 319 ALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ--GVH--DTTILLSLFS 394 (574)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~--~~~~~~~~~~ 394 (574)
+. ++ ++.+....+ +.++++.+|.....+++.......+..++|.++++. +.+ +.+...+...
T Consensus 224 ---------~~--~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~ 289 (412)
T TIGR02332 224 ---------AF--AH--AAMPQRSML-REIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQ 289 (412)
T ss_pred ---------cc--cc--ccccHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHH
Confidence 00 00 000001112 234467888888877776666666778899999875 444 4566778889
Q ss_pred HHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCcc
Q 008210 395 FCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLE 473 (574)
Q Consensus 395 i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~ 473 (574)
++..+|++++|+++||+++|+ .......+...+++.+.... +....+....+.+++.....+.......|.+|+|
T Consensus 290 l~~~~g~l~~g~l~dr~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 365 (412)
T TIGR02332 290 FCTIFGMIWWSRHSDRLKERK----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ 365 (412)
T ss_pred HHHHHHHHHHHHHhcccCccH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH
Confidence 999999999999999998772 12222223333333322222 2222222222223333233334445556789999
Q ss_pred chhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHH
Q 008210 474 HFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGV 538 (574)
Q Consensus 474 ~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (574)
+++.++|+.+....++++ ++|.+.|.+.|.. ++|+.+++++++.
T Consensus 366 ~~~~a~g~~~~~~~~g~~-~~p~~~g~i~~~~--------------------g~~~~~~~~~~~~ 409 (412)
T TIGR02332 366 ARAIAIAVINATGNIGSA-LSPFLIGILKDAT--------------------GSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHHHHHhhhhhhh-hhhhhcccccccC--------------------CCCchhHHHHHHH
Confidence 999999999999999998 8999999999984 3588888866654
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=1.1e-27 Score=257.74 Aligned_cols=398 Identities=13% Similarity=0.088 Sum_probs=272.5
Q ss_pred cHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHH
Q 008210 11 PWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFF 88 (574)
Q Consensus 11 ~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~ 88 (574)
+|..+.+..+..+.... ..+.++..|++.+++|.+.++.+|+.+.+.++.. ..++.|+++||+|||+++.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56665555555554444 5567777899999999999999998777777765 499999999999999999999999999
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhC-C-CCcchHHHHHHhhhhhHHHHHHHHHHHhcc
Q 008210 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNF-P-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (574)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~f-p-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~ 166 (574)
+++++..+ ++++.++++|+++|+|.+..++.....+.+++ | ++|++++|+.....++|..++|.+.+.+.+
T Consensus 84 ~~~~~~~a-------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 84 ASLAAAFS-------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 97764432 36899999999999999998887888888887 5 589999999999999999999999999888
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCC-chhhhhhHHHH
Q 008210 167 NSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPL-SASISYASLFI 245 (574)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (574)
..+|++.+++..+..++..+...+..+.++.++ ++ ..++........+...+...+......+ ..+......++
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~---~~--~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR---DQ--PLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLT 231 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC---CC--CCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 888999998887666665554433332221111 11 1112111111111111111111111111 11111111122
Q ss_pred HHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhh
Q 008210 246 MIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEG 325 (574)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (574)
....+..++ ..|.+ .++|+
T Consensus 232 ~~~~l~~f~----~~e~~----------------------------~~~p~----------------------------- 250 (495)
T PRK14995 232 GALLLGLFI----RTQLA----------------------------ASRPM----------------------------- 250 (495)
T ss_pred HHHHHHHHH----HHHhc----------------------------CCCCC-----------------------------
Confidence 222111111 00000 01110
Q ss_pred ccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhh
Q 008210 326 EGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRL 402 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~ 402 (574)
.+ .+.+|+|.++...+..++..........+.|.++|. +|++ +++....+..++..++.+
T Consensus 251 ----------------~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~ 313 (495)
T PRK14995 251 ----------------ID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGP 313 (495)
T ss_pred ----------------cC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 467888888776666555544444445577777776 6775 567788889999999999
Q ss_pred hhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-c--C-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhh
Q 008210 403 GGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-S--I-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLI 478 (574)
Q Consensus 403 ~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~--~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~ 478 (574)
+.|++.||+|+| ..+..+.++..++..++.. . + ....+...++.|++.|...+.....+.+..|++++|.+
T Consensus 314 ~~g~l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~ 388 (495)
T PRK14995 314 IAGILVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAA 388 (495)
T ss_pred HHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchH
Confidence 999999999988 5566666666666655432 1 2 22455677888999998888788888889999999999
Q ss_pred hhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 479 SNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 479 ~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
.++.++...+|+. +|+.+.|.+.++
T Consensus 389 ~~~~~~~~~lG~~-~G~ai~g~i~~~ 413 (495)
T PRK14995 389 GAIETMAYELGAG-LGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999998 899999999875
No 15
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=1.4e-27 Score=249.50 Aligned_cols=368 Identities=12% Similarity=0.058 Sum_probs=254.5
Q ss_pred cCcHHHHHHHHHHHHhh-hccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
.++|..+....+..+.. ...+....+.|.+.+++|.|.++.+++.+.+.+++. .+++.|.+.||+|||+++.++.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 45665443333333322 234444456799999999999999997666666664 5899999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
.++++.+.++ ++++.+++.|+++|++.+..++....++.+++| ++|++++|+...+.++|..+++++...+.
T Consensus 85 ~~~~~~~~~~-------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 85 IASHVLSALA-------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9887664433 468999999999999999888888889999998 68999999999999999999999888776
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHH
Q 008210 166 HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFI 245 (574)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (574)
+..+|++.+....+..++..+..+..
T Consensus 158 ~~~gw~~~f~~~~~~~~l~~~~~~~~------------------------------------------------------ 183 (390)
T PRK03545 158 QYLGWRTTFLAIGGGALITLLLLIKL------------------------------------------------------ 183 (390)
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHh------------------------------------------------------
Confidence 65567766654433322211111100
Q ss_pred HHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhh
Q 008210 246 MIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEG 325 (574)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (574)
. | +++ + + ++
T Consensus 184 ----------~----------~-------------------------~~~----~----------~-~~----------- 192 (390)
T PRK03545 184 ----------L----------P-------------------------LLP----S----------E-HS----------- 192 (390)
T ss_pred ----------C----------C-------------------------CCC----C----------C-Cc-----------
Confidence 0 0 000 0 0 00
Q ss_pred ccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhh
Q 008210 326 EGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRL 402 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~ 402 (574)
. ..+..++.+|++.+|......++..........+.+++.++ .|.+ +.+...+...++..++++
T Consensus 193 ----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~ 259 (390)
T PRK03545 193 ----------G---SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSV 259 (390)
T ss_pred ----------c---hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHH
Confidence 0 00123567788888765554444333333334456666665 5664 456777888899999999
Q ss_pred hhhhhhhhhhccccCchhhHHHHHHHHHHHHHHH-Hhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhh
Q 008210 403 GGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLF-ASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISN 480 (574)
Q Consensus 403 ~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~-~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g 480 (574)
..|++.||+++| .... +..+..++...+ ... +...+++...+.|++.+...+.....+.+..| ++++.++|
T Consensus 260 ~~g~l~dr~~~~-----~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g 332 (390)
T PRK03545 260 LFSRLGNRHPSG-----FLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMA 332 (390)
T ss_pred HHHHHhhccchh-----HHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHH
Confidence 999999999877 3332 333333333322 222 33455566777788776666666677778776 68899999
Q ss_pred hhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 481 FLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 481 ~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
+.+....+|.. +||.+.|.+.|+. +++..|++.+.+.+++++..+...
T Consensus 333 ~~~~~~~~g~~-~G~~~~G~~~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 333 LFSGIFNIGIG-AGALLGNQVSLHL---------------------GLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhcc---------------------ChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998 8999999999984 588889888888877776654433
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=7.5e-28 Score=254.63 Aligned_cols=368 Identities=15% Similarity=0.109 Sum_probs=247.5
Q ss_pred CccccccccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHH
Q 008210 1 MVTLKAGSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLV 78 (574)
Q Consensus 1 ~~~~~~~~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~ 78 (574)
|+-..+..+++|..+..+.+..+..+. .+......|.+++++|++..+.+++.+...++..+ +++.|+++||+|||++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~ 85 (426)
T PRK12307 6 FPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL 85 (426)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 334445566777776666666655554 44556677899999999999999987777777765 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHH
Q 008210 79 LFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVF 157 (574)
Q Consensus 79 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~ 157 (574)
+.++.++..++++++.+. ++++.++++|++.|+|.|..++....++.+++| ++|++++++...+.++|.+++
T Consensus 86 l~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 158 (426)
T PRK12307 86 MMWSIVAYSVGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIA 158 (426)
T ss_pred HHHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHH
Confidence 999999999987664433 368899999999999999999989999999998 579999999999999999999
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchh
Q 008210 158 TEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSAS 237 (574)
Q Consensus 158 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (574)
+.+...+.+..+|++.+.+..++.++.... ....|+.+ ++
T Consensus 159 ~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~---~~~~p~~~------~~------------------------------- 198 (426)
T PRK12307 159 AYFMPSFAEAYGWRAAFFVGLLPVLLVIYI---RARAPESK------EW------------------------------- 198 (426)
T ss_pred HHHHHHHcccCCHHHHHHHHHHHHHHHHHH---HHHCCCCh------HH-------------------------------
Confidence 888877766667887776544332221110 00000000 00
Q ss_pred hhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchH
Q 008210 238 ISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSE 317 (574)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (574)
++++ .+++ ++++
T Consensus 199 ----------------------------~~~~----------------------~~~~-----------------~~~~- 210 (426)
T PRK12307 199 ----------------------------EEAK----------------------LSGK-----------------GKHS- 210 (426)
T ss_pred ----------------------------HHhh----------------------hhcc-----------------cccc-
Confidence 0000 0000 0000
Q ss_pred HHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHH---HhhcccceeeeccHHHHHHhhCCc--hhhHHHHH
Q 008210 318 VALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVY---FAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSL 392 (574)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~ 392 (574)
+ . .......++++.++++.++...... ++.......+..++|.+.++.|.+ ..+...+.
T Consensus 211 ---------~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 274 (426)
T PRK12307 211 ---------Q----S---AWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTA 274 (426)
T ss_pred ---------c----c---chhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 0 0 0000112346677777776543322 222222223445678888887774 34566778
Q ss_pred HHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH-hcCchHHHHHHHHHhh--hccchhhhHHHHHHhh
Q 008210 393 FSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA-SSIDGTLYAATALLGI--CYGVQFSIMIPTVSEL 469 (574)
Q Consensus 393 ~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~l~g~--~~g~~~~~~~~~~~~~ 469 (574)
..+++.++++++|++.||++|| ..+..+.+...+..+... ..+.........+.|+ +..+..+..+.++.|.
T Consensus 275 ~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (426)
T PRK12307 275 AAFGTVLGNIVWGLCADRIGLK-----KTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDY 349 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHh
Confidence 8899999999999999999998 444444444444433332 2222222222333333 2233346677888999
Q ss_pred cCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 470 FGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 470 ~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
+|++++|+++|+.+....+++. ++|.+.|++.|..
T Consensus 350 ~p~~~~g~~~g~~~~~~~~~~~-~gp~~~g~l~~~~ 384 (426)
T PRK12307 350 FPLEVRGLGTGLIYNLAATSGT-FNSMAATWLGITM 384 (426)
T ss_pred CcHHHHhhhhhHHHHHHhHHHH-HHHHHHHHHHHcc
Confidence 9999999999999999999998 8999999998874
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=6.7e-28 Score=248.77 Aligned_cols=351 Identities=13% Similarity=0.103 Sum_probs=239.4
Q ss_pred ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008210 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (574)
Q Consensus 27 ~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 105 (574)
....++...|.+++|+|+|.+|.+++.+.+.+++.+ +++.|+++||+|||+++..+......+. +. . ... ++
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~--~---~~~-~~ 78 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GR--L---LDP-FN 78 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HH--H---HHh-cc
Confidence 466788889999999999999999987777777655 9999999999999987665444433331 11 1 111 26
Q ss_pred HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHH
Q 008210 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVC 184 (574)
Q Consensus 106 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 184 (574)
++.+++.|+++|+|.+. +.+....+.+|+| ++|++++++...+..+|..+++.+...+.+..+||+.++...++.++.
T Consensus 79 ~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 88999999999999996 4556666789998 689999999999999999999988888877777887776633332222
Q ss_pred -HHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhc
Q 008210 185 -LVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTIC 263 (574)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (574)
++..+.+++.|++
T Consensus 158 ~~~~~~~lp~~p~~------------------------------------------------------------------ 171 (368)
T TIGR00903 158 IILVLAALPALPFQ------------------------------------------------------------------ 171 (368)
T ss_pred HHHHHHHcCCCCCC------------------------------------------------------------------
Confidence 2222222111000
Q ss_pred ccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCcc
Q 008210 264 RKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFK 343 (574)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (574)
.++. .+. + + ...+
T Consensus 172 ----------------------------~~~~-----------------~~~----------------~---~---~~~~ 184 (368)
T TIGR00903 172 ----------------------------AAEG-----------------FGF----------------K---D---AVKE 184 (368)
T ss_pred ----------------------------CCCC-----------------cch----------------H---H---HHHH
Confidence 0000 000 0 0 0013
Q ss_pred HHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCch-hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 344 FTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHD-TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
+++.+|+|.+|......++.......+..|+|+++++.|++. .+...+...+ .+.+..++++||..||+.++ ...
T Consensus 185 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~~---~g~~g~~~~~d~~~r~~~r~-~~~ 260 (368)
T TIGR00903 185 FGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAIL---AGLIGVAVIPDRVARAGLRS-IYI 260 (368)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHH---HHHHHHHHhhHHhhhhhhHH-HHH
Confidence 467899999999998888887777777889999998877753 3333333333 44455689999987662111 222
Q ss_pred HHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 423 TCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
....+...+.+.++... +....++...+.+++....++....+.+|.+|++.||++.|+.+..+.+++. ++|.+.+.+
T Consensus 261 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~-~~~~~~~~~ 339 (368)
T TIGR00903 261 RAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISV-ALALAAMLF 339 (368)
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHH-HHHHHHHHH
Confidence 22233334443333332 2333444555566777777777888999999999999999999999999998 788888877
Q ss_pred hhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 502 YDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
... ....|.+.++..+++.+..
T Consensus 340 ~~~-----------------------~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 340 ISS-----------------------AEAYFTFLAILITIAFAIA 361 (368)
T ss_pred hcC-----------------------HHHHHHHHHHHHHHHHHHH
Confidence 632 4566777777777766554
No 18
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=3e-27 Score=246.15 Aligned_cols=387 Identities=17% Similarity=0.145 Sum_probs=243.9
Q ss_pred HHHHHHHHHHH-HhhhccchhhcchHHHHh-hhCCCHHHHHHHHHHHHh-hhhccccchhccccCCChHHHHHHHHHHHH
Q 008210 12 WVGLGAAVWVQ-IAAGNAYNFPLYSHSLKS-VLGFNQHQLTMLGVANDI-GENVGLLPGLASNKFPPWLVLFIGSLACFF 88 (574)
Q Consensus 12 w~~~~~~~l~~-~~~g~~~~~~~~~~~l~~-~l~~s~~~~~~i~~~~~~-~~~~~~~~G~l~dr~G~r~~~~~g~~~~~~ 88 (574)
|..+..+.+.. ++....+.++...+.+.+ ++|+|.+|.+++.+...+ +.+..++.|.+.||+|+|+++.++.+++.+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 45555554443 455678888888888866 899999999996554444 455689999999999999999999999988
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC
Q 008210 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (574)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~ 167 (574)
.++++.++..... ++++.+++.|++.|++ |..+++....+++||| ++||+++|+..+...+|..+.+.+...+..
T Consensus 113 ~~~~~~~a~~~~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~- 188 (462)
T PRK15034 113 PCVWLGIAVQNPN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF- 188 (462)
T ss_pred HHHHHHHHHcccC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH-
Confidence 8766544322222 3689999999999998 6688899999999999 579999999976666776665554432210
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHH
Q 008210 168 SSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMI 247 (574)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
..++..+ -..... ...+....+.... ...+...+ +
T Consensus 189 ----------------~~l~~~~-G~~~~~----~~~g~~~~~~~~~-~~~~~~~i-----------------------v 223 (462)
T PRK15034 189 ----------------VPVFAFL-GVNGVP----QADGSVMSLANAA-WIWVPLLA-----------------------I 223 (462)
T ss_pred ----------------HHHHHHh-cccccc----ccccchHHHHHHH-HHHHHHHH-----------------------H
Confidence 0000000 000000 0000000000000 00000000 0
Q ss_pred HHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcc
Q 008210 248 ILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEG 327 (574)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (574)
......+. . ++++ + ++
T Consensus 224 ~~i~~~~~--~---------------------------------~~~~----~------------~~------------- 239 (462)
T PRK15034 224 ATIAAWSG--M---------------------------------NDIA----S------------SR------------- 239 (462)
T ss_pred HHHHHHHh--C---------------------------------CCcc----c------------cc-------------
Confidence 00000100 0 0000 0 00
Q ss_pred chhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCchh--hHHHHHHHHHHhhhhhhhh
Q 008210 328 AVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGG 405 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~i~~~ig~~~~G 405 (574)
.+....++.+|+|+.|.+.+.+++..+....+.+++|++.++ .+++. .....+..+...+++|++|
T Consensus 240 -----------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG 307 (462)
T PRK15034 240 -----------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGG 307 (462)
T ss_pred -----------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhH
Confidence 001223678999999999999999887777777788888876 23222 2223345677889999999
Q ss_pred hhhhhhhccccCchhhHHHHHHHHHHHHHH--HHhcC----chHH-HH----HHHHHhhhccchhhhHHHHHHhhcCc--
Q 008210 406 VVSEHFVRKTIPRTIWMTCTQVIMIITYLL--FASSI----DGTL-YA----ATALLGICYGVQFSIMIPTVSELFGL-- 472 (574)
Q Consensus 406 ~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~--~~~~~----~~~l-~~----~~~l~g~~~g~~~~~~~~~~~~~~~~-- 472 (574)
+++||+|++ .++..+.+.+.++... ...+. +... .+ ..+..|++.|..|-.+| ++||+
T Consensus 308 ~LADRiG~~-----~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip----~~f~~~~ 378 (462)
T PRK15034 308 AISDKFGGV-----RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA----VIFRQIT 378 (462)
T ss_pred HHHHhcCch-----HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH----HHHhhhh
Confidence 999999999 4444444444443322 11221 1111 12 22333555556555544 44442
Q ss_pred -------------------cchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHH
Q 008210 473 -------------------EHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFF 533 (574)
Q Consensus 473 -------------------~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (574)
++.|.+.|++...+.+|++ +-|.++|...+.+ ++|...|+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf-~~p~~~g~~~~~~--------------------g~~~~~~~ 437 (462)
T PRK15034 379 IYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGF-FIPQAFGMSLNMT--------------------GSPVGAMK 437 (462)
T ss_pred hhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccc-hhhHHHHHHHHHc--------------------CCcHHHHH
Confidence 2689999999999999999 7898999998886 35899999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 008210 534 VLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~ 553 (574)
++.+..++|+++.+....|.
T Consensus 438 ~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 438 VFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 99999999998887765543
No 19
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.2e-26 Score=231.58 Aligned_cols=374 Identities=15% Similarity=0.149 Sum_probs=284.9
Q ss_pred cccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHH
Q 008210 7 GSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSL 84 (574)
Q Consensus 7 ~~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~ 84 (574)
..+..|..+.+..+..++.+. =+...-..|++.+|||.|..+.++..+.+.++. +.+|+...+.||+.||++++....
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 345667777666666666655 556667789999999999999999655555665 459999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHH
Q 008210 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNM 163 (574)
Q Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~ 163 (574)
++.++.++..++ +||+.++++|++.|+..|..++....+..+..| +||++|++++.++..++.+++.|++..
T Consensus 87 lFi~~n~l~alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 87 LFIVSNLLSALA-------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 999998886554 589999999999999999999999999999997 699999999999999999999999999
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHH
Q 008210 164 LLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASL 243 (574)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
+-+..+||..|.......++.++..+..-| |
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~------------------------------------------------ 190 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP-P------------------------------------------------ 190 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC-C------------------------------------------------
Confidence 877778888776555444443333221111 0
Q ss_pred HHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Q 008210 244 FIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLA 323 (574)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (574)
++ .++ ++
T Consensus 191 ------------------------~~----------------------~~~------------------~~--------- 197 (394)
T COG2814 191 ------------------------SE----------------------ISG------------------SL--------- 197 (394)
T ss_pred ------------------------cc----------------------CCC------------------CC---------
Confidence 00 000 00
Q ss_pred hhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhh
Q 008210 324 EGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVG 400 (574)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig 400 (574)
.....+..+.+|+|..|...+..++.+.+.+....|+.++.++ .|++ ..++.+..++++..+|
T Consensus 198 --------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~G 263 (394)
T COG2814 198 --------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIG 263 (394)
T ss_pred --------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHH
Confidence 0001123678999999999998888888888888888888877 5764 5577888999999999
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC--chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhh
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI--DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLI 478 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~ 478 (574)
..++|++.|| +.| ..+.....++.+.++.+.... .....+..++.|+..+........-.++ .-+++...+
T Consensus 264 n~~gGrl~dr-~~~-----~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a 336 (394)
T COG2814 264 NLLGGRLADR-GPR-----RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLA 336 (394)
T ss_pred HHHHhhhccc-cch-----hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHH
Confidence 9999999999 555 345555555666555554332 3344455555677666665555556666 446899999
Q ss_pred hhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 479 SNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 479 ~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
.++.....++|.. .|..++|.++|+. +|....++.+...+++.++.+...++
T Consensus 337 ~sl~~aa~nlgia-~GA~lGG~v~~~~---------------------g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 337 GSLNVAAFNLGIA-LGAALGGLVLDAL---------------------GYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhh---------------------chHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998 8999999999994 58888999888888887766554443
No 20
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=3.3e-27 Score=245.82 Aligned_cols=378 Identities=17% Similarity=0.153 Sum_probs=255.0
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.+.++...|.+++++|.+..+.+++.+...++..+ .++.|++.||+|||+++.++.++..++..++.+. +++
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 82 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-------GAY 82 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-------cCH
Confidence 34566677889999999999999977777777655 9999999999999999999999888886664333 367
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|++.|++.+...+....++.+++| ++|++++++.....++|..+++.+...+.....|++.+....++.++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998 6899999999999999999999998877666667766655444433332
Q ss_pred HHHHh-cccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcc
Q 008210 186 VMMYF-VRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICR 264 (574)
Q Consensus 186 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (574)
+..++ .++.++++.. .
T Consensus 163 ~~~~~~~~~~~~~~~~---~------------------------------------------------------------ 179 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKW---L------------------------------------------------------------ 179 (399)
T ss_pred HHhhheecCCCCcccc---C------------------------------------------------------------
Confidence 22221 1111100000 0
Q ss_pred cCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccH
Q 008210 265 KRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKF 344 (574)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (574)
+++++ + ...+. ...+. ++ ++ ++..+....
T Consensus 180 -~~~~~----------~---------~~~~~-------------------------~~~~~-~~---~~--~~~~~~~~~ 208 (399)
T TIGR00893 180 -TEEEK----------Y---------IVVGG-------------------------LLAEQ-QG---KG--PSTPKKYQI 208 (399)
T ss_pred -CHHHH----------h---------hcchh-------------------------hcccc-cc---cc--ccCCCccch
Confidence 00000 0 00000 00000 00 00 111122345
Q ss_pred HHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhh
Q 008210 345 TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIW 421 (574)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~ 421 (574)
++.+|+|.++...+..++.......+..+.|.+.++ .|.+ +.+...+...++..++++++|++.||++||+......
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 209 KELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 778899999988888777666666666778887765 5764 4567778888999999999999999999994211111
Q ss_pred HHHHHHH-HHHHHHHHHhc--CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH
Q 008210 422 MTCTQVI-MIITYLLFASS--IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA 498 (574)
Q Consensus 422 ~~~~~~~-~~i~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~ 498 (574)
....... ...+....... +.....+...+.+.+..+..+....+++|.+|++++|++.|+.+....+++. ++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGI-VGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhh-hhhHHh
Confidence 1111111 11111111111 1222333333333333336788889999999999999999999999999998 899999
Q ss_pred HhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 499 GYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 499 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
|.+.|.. ++|+..|++.+++.+++.+..+
T Consensus 368 g~l~~~~--------------------g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 368 GAIAATT--------------------GSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhhccCC--------------------CchhHHHHHHHHHHHHHHHHHH
Confidence 9999974 2378888888777777665543
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=4.8e-27 Score=246.15 Aligned_cols=378 Identities=13% Similarity=0.090 Sum_probs=246.8
Q ss_pred cccccccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHH
Q 008210 3 TLKAGSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLF 80 (574)
Q Consensus 3 ~~~~~~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~ 80 (574)
..++..+++|..+.+.++..+..+. .+..+...|.+++++|++..+.+++.+...++..+ +++.|.+.||+|||+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 2 WYRHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred CCCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 4455667899998888887776665 67788888999999999999999976666666654 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHH
Q 008210 81 IGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTE 159 (574)
Q Consensus 81 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~ 159 (574)
++.++..++++++.+. ++++.+++.|++.|++.+..++....++.+++| ++|+++.++...+.++|.++++.
T Consensus 82 ~~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 154 (405)
T TIGR00891 82 TSIVLFSAGTLACGFA-------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQ 154 (405)
T ss_pred HHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999888886664332 368899999999999999999989999999998 68999999999999999999988
Q ss_pred HHHHhccCC--hhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchh
Q 008210 160 IYNMLLHNS--SSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSAS 237 (574)
Q Consensus 160 i~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (574)
+...+.... .|++.+.+.+++.++..+.....++.+++.+++ .
T Consensus 155 l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------------------------- 199 (405)
T TIGR00891 155 VYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKH--A--------------------------------- 199 (405)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHh--h---------------------------------
Confidence 887765533 477777666555444433322222111000000 0
Q ss_pred hhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchH
Q 008210 238 ISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSE 317 (574)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (574)
+++. .++. .++
T Consensus 200 -----------------------------~~~~---------------------~~~~-------------------~~~ 210 (405)
T TIGR00891 200 -----------------------------GKAL---------------------VRTM-------------------VDI 210 (405)
T ss_pred -----------------------------hhhh---------------------hhhH-------------------HHH
Confidence 0000 0000 000
Q ss_pred HHHHHhhhccchhhhccCCCCCCCccHHHhhh-c-hhHHHHHHHHHhhcccceeeeccHHHHHH-hhCCc--hhhHHHHH
Q 008210 318 VALLLAEGEGAVRRKKRRPKRGEDFKFTEAVV-K-ADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVH--DTTILLSL 392 (574)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--~~~~~~~~ 392 (574)
.. .++... ++ .........++..+ + +.+..+................+.|.+.+ +.|.+ +.+...+.
T Consensus 211 ---~~-~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 282 (405)
T TIGR00891 211 ---LY-GGEHRI--AN--IVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVF 282 (405)
T ss_pred ---Hh-ccchhh--hh--hhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHH
Confidence 00 000000 00 00000000011111 1 11222222222211122233345666665 46774 45677788
Q ss_pred HHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHH-HHHHHhcCch-HHHHHHHHHhhhccchhhhHHHHHHhhc
Q 008210 393 FSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIIT-YLLFASSIDG-TLYAATALLGICYGVQFSIMIPTVSELF 470 (574)
Q Consensus 393 ~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~-~~~~~~~~~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~ 470 (574)
..++..+++++.|++.||++|| ..+.++.+...+. ..+....+.. .+.+...+.+++.+..++..+..++|.+
T Consensus 283 ~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (405)
T TIGR00891 283 SNIGAIVGGCVFGFLGDWLGRR-----KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYF 357 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCch-----hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhC
Confidence 8999999999999999999998 3344333333222 2222222222 3334445666666666778888999999
Q ss_pred CccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 471 GLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 471 ~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
|++++|++.|+.+....+++. ++|.+.|++.|+.
T Consensus 358 ~~~~~~~~~g~~~~~~~~g~~-~g~~~~g~l~~~~ 391 (405)
T TIGR00891 358 PTDQRAAGLGFTYQLGNLGGA-LAPIIGALLAQRL 391 (405)
T ss_pred CcchhHHHhhHHHHHHHHHHH-HHHHHHHHHHHhc
Confidence 999999999999999999998 8999999999985
No 22
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=1.3e-26 Score=242.61 Aligned_cols=374 Identities=13% Similarity=0.084 Sum_probs=257.8
Q ss_pred cCcHHHHHHHHHHHHhhh-ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
.+||+....+++..+..+ ..+.++...|++++++|+|.++.+++.+...++..+ +++.|++.||+|||+++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 456666555555554444 477889999999999999999999977777777765 999999999999999999999888
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
.++.+++.+ . ++++.+++.|+++|++.|..++.....+.+++| ++|+++.++.....++|+.+.|.+...+.
T Consensus 83 ~i~~~l~~~-----~--~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 83 ILAVAGLMF-----S--HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHH-----c--chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888665332 2 367889999999999999888888888999998 57999999998888899888888877665
Q ss_pred c-CChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHH
Q 008210 166 H-NSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLF 244 (574)
Q Consensus 166 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (574)
. ..+|++.+.....+.++..+..++.+
T Consensus 156 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~---------------------------------------------------- 183 (394)
T PRK03699 156 ARSIEWYWVYACIGLVYVAIFILTLFSE---------------------------------------------------- 183 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------------
Confidence 4 34677666543332222211111000
Q ss_pred HHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhh
Q 008210 245 IMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAE 324 (574)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (574)
.|+.+ ++++ ++
T Consensus 184 ---------------------~p~~~---------------------~~~~-----------------~~---------- 194 (394)
T PRK03699 184 ---------------------FPALG---------------------KHAP-----------------KA---------- 194 (394)
T ss_pred ---------------------Ccccc---------------------ccCc-----------------cc----------
Confidence 00000 0000 00
Q ss_pred hccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhh
Q 008210 325 GEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGR 401 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~ 401 (574)
++ +..+ ...++.+|...+..++.......+..+.|.+.++ .|++ +.+...+.+.++..+|+
T Consensus 195 -------~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 258 (394)
T PRK03699 195 -------DK--PVAK-------EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM 258 (394)
T ss_pred -------cC--cccc-------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH
Confidence 00 0000 0113455666665555544444556788888865 5774 56778888999999999
Q ss_pred hhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhh
Q 008210 402 LGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISN 480 (574)
Q Consensus 402 ~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g 480 (574)
+++|+++||+++| ..+.....+..+.+.++... +...+.+...+.|++.+..++.......+..+ ++++...|
T Consensus 259 ~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g 332 (394)
T PRK03699 259 WIFSFIVRFFDLQ-----RILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVN 332 (394)
T ss_pred HHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHH
Confidence 9999999999998 33443334444444444333 33345556677788777777877777777765 55678889
Q ss_pred hhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 481 FLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 481 ~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
.......+|+. ++|.+.|++.|.. +++..+++..++++++.++.+...+-+|
T Consensus 333 ~~~~~~~~g~~-i~p~~~G~l~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (394)
T PRK03699 333 FILTCGTIGTM-LTFVVTSPIVAHF---------------------GLQAALLTANGLYAVVFVMCILLGFVSK 384 (394)
T ss_pred HHHHhhhHHHH-HHHHHHHHHHHHh---------------------CchhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 98888999998 9999999999974 4788888888777777655544444333
No 23
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.3e-26 Score=243.05 Aligned_cols=348 Identities=16% Similarity=0.134 Sum_probs=235.6
Q ss_pred hhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCC---hhH
Q 008210 31 FPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES---LPY 106 (574)
Q Consensus 31 ~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~---~~~ 106 (574)
.+.+...+++++|.|..+.+++.+...++..+ +++.|++.||+|||+++.++.+++.++.+.+... ....+ .++
T Consensus 35 ~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 112 (399)
T PRK05122 35 LAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLA--GLLAAWPVLSL 112 (399)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHh--hhhhccchhHH
Confidence 33444457889999999999977777777655 9999999999999999999998887775553332 22111 246
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|+++|+|.+...+.....+.+++| ++|++++++...+..+|.++++++...+.+..+|+..+.+..+..++.
T Consensus 113 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~- 191 (399)
T PRK05122 113 LLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG- 191 (399)
T ss_pred HHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH-
Confidence 678899999999999988888888889997 689999999988888888888888877765545554433222111110
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
....+.
T Consensus 192 --~~~~~~------------------------------------------------------------------------ 197 (399)
T PRK05122 192 --LLLARP------------------------------------------------------------------------ 197 (399)
T ss_pred --HHHHhc------------------------------------------------------------------------
Confidence 000000
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
.+++ ++ + + + ++ .+.+
T Consensus 198 ~~~~------------------------~~----~----------~-~----------------------~~----~~~~ 212 (399)
T PRK05122 198 RPAV------------------------PP----V----------K-G----------------------ER----LPFR 212 (399)
T ss_pred CCCC------------------------CC----C----------C-c----------------------cc----hhHH
Confidence 0000 00 0 0 0 00 0111
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCchhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCT 425 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~ 425 (574)
+.+|+ +|.......+..........+.+.+.++.|.++.+...+.+.++..++++..|++.||+++| +.+..+
T Consensus 213 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~~ 285 (399)
T PRK05122 213 RVLGR--VWPYGMGLALASIGFGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGL-----RVAIVS 285 (399)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHH
Confidence 22221 12111111111111112334566666676766666667788888999999999999999988 455555
Q ss_pred HHHHHHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 426 QVIMIITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 426 ~~~~~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
..+..++..++...+ ....++...+.|++.+..++.....+.|.+|++++|+++|+.+....++.. ++|.+.|.+.|.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~~~~~g~l~~~ 364 (399)
T PRK05122 286 LLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLG-ITGPLAGLVASW 364 (399)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 566666665555433 335556677888888888887777888999999999999999999999987 788899999987
Q ss_pred hhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 505 EAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
. +|+..|++.+++++++++....+
T Consensus 365 ~---------------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 365 F---------------------GYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred c---------------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 58889998888777776655443
No 24
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=9.1e-27 Score=250.51 Aligned_cols=357 Identities=13% Similarity=0.068 Sum_probs=219.2
Q ss_pred HHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHH-HHHH-----HHHHHhhhhc-cccchhccccCCChHHHHHHH
Q 008210 12 WVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQ-LTML-----GVANDIGENV-GLLPGLASNKFPPWLVLFIGS 83 (574)
Q Consensus 12 w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~-~~~i-----~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~ 83 (574)
+..+.++.+..+..+. ...++...|.+.++|+.+..+ .+++ .+...++..+ +++.|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 3444444444444444 445677788899988644322 2222 2344455544 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCChhHH--------HHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHH
Q 008210 84 LACFFGYGVLWLAVSRTVESLPYW--------LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSA 154 (574)
Q Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~ 154 (574)
+++++++++++++ ++++ .++++|+++|+|.|..++....++.+|+| ++||++.++...+..+|.
T Consensus 95 ~l~~i~~~~~a~~-------~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 95 VIMSISTFCIGLI-------PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999997775433 3454 37889999999999999999999999998 689999999988877777
Q ss_pred HHHHHHHHHhc--------cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHh
Q 008210 155 AVFTEIYNMLL--------HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTT 226 (574)
Q Consensus 155 ~i~~~i~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (574)
.+++.+...+. ...+||+.++++.++.++.++....+++.|+ +.
T Consensus 168 ~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~-----------~~----------------- 219 (490)
T PRK10642 168 VLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPA-----------FQ----------------- 219 (490)
T ss_pred HHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChh-----------HH-----------------
Confidence 66665543321 2357888877765544433322222211110 00
Q ss_pred hhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCC
Q 008210 227 ILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDL 306 (574)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (574)
..+++. .++.
T Consensus 220 -------------------------------------~~~~~~----------------------~~~~----------- 229 (490)
T PRK10642 220 -------------------------------------QHVDKL----------------------EQGD----------- 229 (490)
T ss_pred -------------------------------------HHHHhh----------------------hhhc-----------
Confidence 000000 0000
Q ss_pred CCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhc-hhHHHHHH-HHHhhcccceeeeccHHHHHHh-hCC
Q 008210 307 GSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVK-ADFWLLFL-VYFAGVGSGVTVLNNLAQIGIA-QGV 383 (574)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~g~ 383 (574)
+ ++. + + .++.++++.+++ +..+.... ..++.......+..+.|.++++ .|+
T Consensus 230 ------~-------------~~~--~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 283 (490)
T PRK10642 230 ------R-------------EGL--Q---D--GPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHY 283 (490)
T ss_pred ------c-------------ccc--c---c--cccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 000 0 0 001123444442 22222222 2222222333445678888754 677
Q ss_pred c--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHH-HHHHHH--HhcC-chHHHHHHHHHhhhccc
Q 008210 384 H--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMI-ITYLLF--ASSI-DGTLYAATALLGICYGV 457 (574)
Q Consensus 384 ~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~-i~~~~~--~~~~-~~~l~~~~~l~g~~~g~ 457 (574)
+ +.....+...++..++.++.|+++||+||| ..+..+.+... .+..++ ...+ ...+++...+.|++.+.
T Consensus 284 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 358 (490)
T PRK10642 284 SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNC 358 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 5 344566677788889999999999999999 44444433222 222211 1222 22444556666777776
Q ss_pred hhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 458 QFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
..+..+.+..|.+|++.||++.|+.+....+++. ++|.+.+++.+..
T Consensus 359 ~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~-~~p~i~g~l~~~~ 405 (490)
T PRK10642 359 FTGVMASTLPAMFPTHIRYSALAAAFNISVLVAG-LTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHh
Confidence 6677778888999999999999986655666676 8999999998764
No 25
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=1.1e-26 Score=248.59 Aligned_cols=366 Identities=15% Similarity=0.133 Sum_probs=227.9
Q ss_pred ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008210 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (574)
Q Consensus 27 ~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 105 (574)
..+.++.+.|.+++++|++.++.+++.+.+.+++.+ +++.|+++||+|||+++..+.++++++.+++.+ + ++
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----~--~s 123 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL-----V--SS 123 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-----h--cC
Confidence 356778888999999999999999977777777765 899999999999999999998888888554332 2 25
Q ss_pred HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHh----ccC-----ChhHHHHH
Q 008210 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML----LHN-----SSSKLLLV 175 (574)
Q Consensus 106 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l----~~~-----~~~~~~~~ 175 (574)
++.+++.|++.|++.+.. ......+.+||| ++||+++|+......+|..+++.+...+ ... .+||+.+.
T Consensus 124 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~ 202 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFF 202 (476)
T ss_pred HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHH
Confidence 678888999999998864 445667899998 6899999999876666665554444322 111 23554444
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhc
Q 008210 176 LAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLA 255 (574)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (574)
+..++.++..+..+++.+
T Consensus 203 i~g~l~l~~~l~~~~~~~-------------------------------------------------------------- 220 (476)
T PLN00028 203 VPGLLHIIMGILVLTLGQ-------------------------------------------------------------- 220 (476)
T ss_pred HHHHHHHHHHHHHHHHcC--------------------------------------------------------------
Confidence 332222221111111100
Q ss_pred ccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccC
Q 008210 256 IPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRR 335 (574)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (574)
++|+.. .++. ++ +. +.
T Consensus 221 ---------~~p~~~---------------------~~~~-----------------~~-----------~~----~~-- 236 (476)
T PLN00028 221 ---------DLPDGN---------------------YREL-----------------KK-----------SG----TM-- 236 (476)
T ss_pred ---------cCCCCc---------------------hhhH-----------------Hh-----------cC----cc--
Confidence 000000 0000 00 00 00
Q ss_pred CCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhh
Q 008210 336 PKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFV 412 (574)
Q Consensus 336 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g 412 (574)
++......+++.++++.+|.+.+.+++.......+..+.|.++.+ .|++ +++...+++.+++.++++++|+++||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~ 316 (476)
T PLN00028 237 PKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAA 316 (476)
T ss_pred ccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 000011234667888999988777665544444455667777655 5875 5667888899999999999999999999
Q ss_pred ccc--cCchhhHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhH
Q 008210 413 RKT--IPRTIWMTCTQVIMIITYLLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLA 489 (574)
Q Consensus 413 ~r~--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 489 (574)
||+ ..|.+......++..+.++++...+. ....+..++.+++.+...+....++.+.. ++++|.++|+.+.++.++
T Consensus 317 ~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg 395 (476)
T PLN00028 317 RRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVG 395 (476)
T ss_pred HhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHH
Confidence 872 12223333333333333333332322 23333444555544444444444455554 578999999988877777
Q ss_pred HHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 490 AFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 490 ~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
+. ++|.+. +.... .+|+.+|++.+++.+++.++.++.+
T Consensus 396 ~~-i~~~l~----~~~~~------------------~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 396 AV-LTQLLF----FTGSS------------------YSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HH-HHHHHH----HhcCC------------------ccHhhHHHHHHHHHHHHHHHHHhee
Confidence 76 555443 32110 2588999999888888877766654
No 26
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=8.6e-27 Score=249.30 Aligned_cols=399 Identities=14% Similarity=0.076 Sum_probs=250.2
Q ss_pred hhhcchHHHHhhhCCC--------HHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 008210 30 NFPLYSHSLKSVLGFN--------QHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRT 100 (574)
Q Consensus 30 ~~~~~~~~l~~~l~~s--------~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~ 100 (574)
..+...+.+..+++.+ ..+.+++.+.+.++..+ +++.|+++||+|||+++.++.+++.++.+++... .
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~- 122 (481)
T TIGR00879 46 VIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--A- 122 (481)
T ss_pred hhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--c-
Confidence 3455566677777666 88999977777777655 9999999999999999999999999886664322 1
Q ss_pred cCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHH---HHhccCChhHHHHHH
Q 008210 101 VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIY---NMLLHNSSSKLLLVL 176 (574)
Q Consensus 101 ~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~---~~l~~~~~~~~~~~~ 176 (574)
...+++.+++.|+++|+|.+..++....++.+++| ++|++++++...+..+|..+++.+. .......+|++.+.+
T Consensus 123 -~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 123 -FALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred -cccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 12246789999999999999999989999999998 6899999999999999999988887 433345678888877
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcc
Q 008210 177 AVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAI 256 (574)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (574)
..++.++.++..+++++.|.+...+++.+..
T Consensus 202 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------------------------------------- 232 (481)
T TIGR00879 202 QLIPAGLLFLGLFFLPESPRWLVGKGRVEEA------------------------------------------------- 232 (481)
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHcCChHHH-------------------------------------------------
Confidence 6666665555555444322110000000000
Q ss_pred cccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCC
Q 008210 257 PVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRP 336 (574)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (574)
++ ..++. .++. + ++.+..+.......... ++.+ .
T Consensus 233 -----------~~------------~~~~~-----~~~~---------------~-~~~~~~~~~~~~~~~~~-~~~~-~ 266 (481)
T TIGR00879 233 -----------RK------------SLARL-----RGTS---------------G-EDKELLDELELIDIKRS-IEKR-S 266 (481)
T ss_pred -----------HH------------HHHHH-----hCCC---------------C-CcHHHHHHHHHHHHHHH-HHHh-h
Confidence 00 00000 0000 0 00000000000000000 0000 0
Q ss_pred CCCCCccHHHhh---hchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhh
Q 008210 337 KRGEDFKFTEAV---VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHF 411 (574)
Q Consensus 337 ~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~ 411 (574)
........++.. +.+.++...+..+..........++.+.+.++.|++ +.........++..++++++|+++||+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 346 (481)
T TIGR00879 267 VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF 346 (481)
T ss_pred ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000011112221 233344444444444444444556677777777874 456677788888999999999999999
Q ss_pred hccccCchhhHHHHHHHHHHHHHHHH---h--cC------chHHHHHHHHHhhhccc-hhhhHHHHHHhhcCccchhhhh
Q 008210 412 VRKTIPRTIWMTCTQVIMIITYLLFA---S--SI------DGTLYAATALLGICYGV-QFSIMIPTVSELFGLEHFGLIS 479 (574)
Q Consensus 412 g~r~~~~~~~~~~~~~~~~i~~~~~~---~--~~------~~~l~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~~g~~~ 479 (574)
+|| ..+..+.+...++++++. . .+ .........+.+.+.+. ..+....++.|.+|+++++++.
T Consensus 347 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 421 (481)
T TIGR00879 347 GRR-----PLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGI 421 (481)
T ss_pred cch-----HHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHH
Confidence 998 445555555555554443 1 11 12222233333333333 3355567779999999999999
Q ss_pred hhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 480 NFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 480 g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
|+.+....++++ ++|.+.+.+.++. +|+..|++.++++++++++.+...+++|
T Consensus 422 ~~~~~~~~lg~~-i~~~~~~~~~~~~---------------------~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 422 SIAVAANWLANF-IVGFLFPTMLESI---------------------GVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhc---------------------CccceehhHHHHHHHHHHHHheecccCC
Confidence 999999999998 8999999998873 4788888888887777766655555443
No 27
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=6.4e-27 Score=250.41 Aligned_cols=399 Identities=12% Similarity=0.057 Sum_probs=258.5
Q ss_pred cccCcHHHHHHHHHHHHh-hhccchhhcchHHHHh----------------------hhCCCHHHHHHHHHHHHhhhhc-
Q 008210 7 GSRPPWVGLGAAVWVQIA-AGNAYNFPLYSHSLKS----------------------VLGFNQHQLTMLGVANDIGENV- 62 (574)
Q Consensus 7 ~~~~~w~~~~~~~l~~~~-~g~~~~~~~~~~~l~~----------------------~l~~s~~~~~~i~~~~~~~~~~- 62 (574)
..+.||.++...++.... .......++..+.+++ +++++..+.+++.+.+.+++.+
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 456778776666554432 2334445555555544 7899999999977777777765
Q ss_pred cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcch
Q 008210 63 GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGT 141 (574)
Q Consensus 63 ~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~ 141 (574)
+++.|++.||+|+|+++.++.++.+++.+++.... ..+++.+++.|+++|++.+..++....++.+|+| ++|++
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~ 167 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA-----GGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSR 167 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH-----HcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHH
Confidence 99999999999999999999998888865533221 1246778889999999999999999999999998 68999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhccC-ChhHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCCCCCCCcchhhHHHHHHHHH
Q 008210 142 VAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFV-RPCTPASGEDSAAPSHFLFTQAASVVLG 219 (574)
Q Consensus 142 a~gi~~~~~~~g~~i~~~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (574)
++++...+..+|.++++++.+.+... .+|++.+.+..++.++..+..+.. ++.|+.
T Consensus 168 ~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~---------------------- 225 (465)
T TIGR00894 168 LLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSI---------------------- 225 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCccc----------------------
Confidence 99999999999999999998877655 256655544433322222211111 100000
Q ss_pred HHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCC
Q 008210 220 FFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDP 299 (574)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (574)
++
T Consensus 226 --------------------------------------------------------------------------~~---- 227 (465)
T TIGR00894 226 --------------------------------------------------------------------------HP---- 227 (465)
T ss_pred --------------------------------------------------------------------------CC----
Confidence 00
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHH
Q 008210 300 SSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGI 379 (574)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (574)
. +++++.+..++..++ ++ ++.....++++.++++.+|...+..++.......+..++|.+++
T Consensus 228 ~------------~~~~~~~~i~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 289 (465)
T TIGR00894 228 C------------ISKFEKKYINSSLQG----QK--GSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFIS 289 (465)
T ss_pred C------------CCHHHHHHHHhhccc----cc--CCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000000000 00 00111235788999999999988888776666666778898886
Q ss_pred h-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh-h--HHHHHHHH--HHHHHHHHh-cCc-hHHHHHHH
Q 008210 380 A-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI-W--MTCTQVIM--IITYLLFAS-SID-GTLYAATA 449 (574)
Q Consensus 380 ~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~-~--~~~~~~~~--~i~~~~~~~-~~~-~~l~~~~~ 449 (574)
+ +|++ +.++..++..++..++.++.|+++||+++|+..+.. . +....... .+..+.... .+. ...++...
T Consensus 290 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (465)
T TIGR00894 290 WVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILT 369 (465)
T ss_pred HHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 6 5774 567777888999999999999999998876332211 1 11111111 111111222 222 22333344
Q ss_pred HHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccch
Q 008210 450 LLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFR 529 (574)
Q Consensus 450 l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (574)
+.+.+.+...+.......|..| +..|.+.|+.++.+.+++. ++|.+.|++.|.... +.|.
T Consensus 370 l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~-i~p~l~g~~~~~~~~------------------~~~~ 429 (465)
T TIGR00894 370 LANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGL-IASTLAGNILSQDSK------------------NVWL 429 (465)
T ss_pred HHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHH-HHHHhhheeeCCCCc------------------hHHH
Confidence 4445555444544455556665 5899999999999999998 899999998876311 2488
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 008210 530 ITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~ 548 (574)
..|++.++..+++.++...
T Consensus 430 ~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 430 IVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHeee
Confidence 8898888877777665543
No 28
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.96 E-value=4.7e-26 Score=241.24 Aligned_cols=378 Identities=13% Similarity=-0.005 Sum_probs=225.3
Q ss_pred cCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhC---CCHHHHHHHHHHH---Hhhhhc-cccchhccccCCChHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLG---FNQHQLTMLGVAN---DIGENV-GLLPGLASNKFPPWLVLF 80 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~---~s~~~~~~i~~~~---~~~~~~-~~~~G~l~dr~G~r~~~~ 80 (574)
+++|..+..+.+..+.... ...++...|.+.++++ .+..+.+.+...+ .++..+ +++.|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 4555555555444444333 5567888899999984 5555544432222 233334 889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-CChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHH
Q 008210 81 IGSLACFFGYGVLWLAVSRTV-ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFT 158 (574)
Q Consensus 81 ~g~~~~~~g~~~~~~~~~~~~-~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~ 158 (574)
++.+++.++++++.++.+... ....+..+++.|+++|+|.|..++.+..++.|++| ++||++.++...+...|..+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 999999999777543310000 00013467889999999999999999999999998 6899999988777766666555
Q ss_pred HHHHHhc--------cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcc
Q 008210 159 EIYNMLL--------HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDH 230 (574)
Q Consensus 159 ~i~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (574)
.+...+. ...+||+.+.++.++.++.......
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~---------------------------------------- 217 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQ---------------------------------------- 217 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhc----------------------------------------
Confidence 4432221 1345666665544433321110000
Q ss_pred cCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008210 231 MIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFR 310 (574)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (574)
.| |+
T Consensus 218 -----------------------------------~~--------------------------e~--------------- 221 (432)
T PRK10406 218 -----------------------------------LD--------------------------ET--------------- 221 (432)
T ss_pred -----------------------------------CC--------------------------CC---------------
Confidence 00 00
Q ss_pred CCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhh-cccceeeeccHHHHHHh-hCCc--hh
Q 008210 311 DNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAG-VGSGVTVLNNLAQIGIA-QGVH--DT 386 (574)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~--~~ 386 (574)
++. + .+. ++ + ..++++.+|++.+|...+..++. ......+..++|.+.++ .|.+ +.
T Consensus 222 --~~~-~---------~~~--~~--~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~ 281 (432)
T PRK10406 222 --SQQ-E---------TRA--LK--E----AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVA 281 (432)
T ss_pred --chH-H---------Hhh--hc--c----cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 000 0 000 00 0 12356778888888766554432 33334456678888765 6775 34
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHH-HH--Hh-cCchHH-HHHHHHHhhhccchhhh
Q 008210 387 TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYL-LF--AS-SIDGTL-YAATALLGICYGVQFSI 461 (574)
Q Consensus 387 ~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~-~~--~~-~~~~~l-~~~~~l~g~~~g~~~~~ 461 (574)
+...+...+...++.++.|+++||++|| ..+....++..+... .. .. .+.... .....+.+++.+...+.
T Consensus 282 ~~~~~i~~~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (432)
T PRK10406 282 SGIMTAALFVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSI 356 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677777788889999999999998 233332222222211 11 11 112222 22222222333444455
Q ss_pred HHHHHHhhcCccchhhhhhhhhhhhhh-HHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHH
Q 008210 462 MIPTVSELFGLEHFGLISNFLALGNPL-AAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCC 540 (574)
Q Consensus 462 ~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (574)
...+.+|.+|++.|++++|+.+..+.+ .+. ..|.+.+.+ +.+ +.|...++..+++.+
T Consensus 357 ~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~-~~p~~~~~l-~~~--------------------g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 357 SGILKAEMFPAQVRALGVGLSYAVANALFGG-SAEYVALSL-KSI--------------------GMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHCCCCccchhhhHHHHHHHHHHHh-HHHHHHHHH-HHh--------------------CCCcHHHHHHHHHHH
Confidence 677899999999999999998876554 344 577777744 543 235556666666666
Q ss_pred HHHHHHHHH
Q 008210 541 VGSILSIIL 549 (574)
Q Consensus 541 ~~~~~~~~~ 549 (574)
++.+..+++
T Consensus 415 i~~~~~~~l 423 (432)
T PRK10406 415 VAFLVSLML 423 (432)
T ss_pred HHHHHHHHh
Confidence 665555443
No 29
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=9e-26 Score=236.05 Aligned_cols=347 Identities=15% Similarity=0.046 Sum_probs=231.0
Q ss_pred cchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHh-hccCChhHHHHH
Q 008210 33 LYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVS-RTVESLPYWLLW 110 (574)
Q Consensus 33 ~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~~~l~ 110 (574)
.+..++++++|.|..+++++.+...++.. .+++.|+++||+|||+++.++.+.+.++.+....... .....++++.++
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 33335788999999999997666666665 4999999999999999999988877766433211110 111123678899
Q ss_pred HHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHH
Q 008210 111 IALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMY 189 (574)
Q Consensus 111 ~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (574)
+.|+++|+|.+...++....+.+++| ++|++++++...+...|..+++++...+....+|+....+..+..++. ..
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~---~~ 193 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLA---WA 193 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH---HH
Confidence 99999999999888888888899997 689999999999888888888888776654444544322211110000 00
Q ss_pred hcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcc
Q 008210 190 FVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSE 269 (574)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (574)
+.+ . .+++
T Consensus 194 ~~~-----------------------------------------------------------------~-------~~~~ 201 (392)
T PRK12382 194 FNG-----------------------------------------------------------------T-------VRKV 201 (392)
T ss_pred HHH-----------------------------------------------------------------h-------ccCC
Confidence 000 0 0000
Q ss_pred cccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhh
Q 008210 270 SGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVV 349 (574)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (574)
++ + ++ ++ + +.++.+|
T Consensus 202 ------------------------~~----~------------~~-----------------~~--~------~~~~~~~ 216 (392)
T PRK12382 202 ------------------------PA----H------------AG-----------------ER--P------SLWSVVG 216 (392)
T ss_pred ------------------------CC----C------------cc-----------------cC--c------hHHHHHH
Confidence 00 0 00 00 0 0111111
Q ss_pred chhHHHHHHHHHhhcccceeeeccHHHHHHhhCCchhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH
Q 008210 350 KADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM 429 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 429 (574)
.+|...+..++..........+.+.+.++.+.++.+...+...++..++++..|++.||+|+| ..+..+..+.
T Consensus 217 --~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~ 289 (392)
T PRK12382 217 --LIWKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVE 289 (392)
T ss_pred --HHHHhHHHHHHHHHHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHH
Confidence 111111111111111112334556677777776666666777888899999999999999988 3344455555
Q ss_pred HHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhh
Q 008210 430 IITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAK 508 (574)
Q Consensus 430 ~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~ 508 (574)
.++..++...+ ....++...+.|++.+...+.....+.|.+|++++|++.|+.++...++.. ++|.+.|++.|+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-ig~~~~g~l~~~~--- 365 (392)
T PRK12382 290 TVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYG-VSGPLAGMLATSF--- 365 (392)
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHh---
Confidence 55555544333 334556677788888887787888889999999999999999999999998 8999999999984
Q ss_pred hcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHH
Q 008210 509 QQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
+|+..|++.+++.+++.++.+.
T Consensus 366 ------------------g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 366 ------------------GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred ------------------CchHHHHHHHHHHHHHHHHHHh
Confidence 5899999888877777665543
No 30
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.8e-25 Score=238.21 Aligned_cols=383 Identities=13% Similarity=0.037 Sum_probs=250.6
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.+.+....|.+.+++|.+..+.+|+.+.+.++.. ..++.|+++||+|||+++..+.+++.++++.+. .. +++
T Consensus 26 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-----~~--~~~ 98 (471)
T PRK10504 26 TTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCA-----LS--GTL 98 (471)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH-----Hh--CCH
Confidence 4455667888999999999999997676667765 499999999999999999999888888765532 22 357
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|+++|+|.+...+.....+.+++| ++|+++.++......+|..+++.+.+.+.+..+|++.+.+..+...+..
T Consensus 99 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 99 NELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGA 178 (471)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 888999999999999988888888999998 5799999999999999999999998888777788888877765555554
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
+......+. .+.+ ..+.+.........+...+........ ...+.........+...........+
T Consensus 179 ~~~~~~~~~--~~~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------ 244 (471)
T PRK10504 179 IATLMLMPN--YTMQ----TRRFDLSGFLLLAVGMATLTLALDGSK--GLGLSPLAIAGLVAVGVVALLLYLLH------ 244 (471)
T ss_pred HHHHHhCCC--cccc----CCCCChHHHHHHHHHHHHHHHHHhcCC--cCCcchHHHHHHHHHHHHHHHHHHHH------
Confidence 444333221 1111 111112212111111111111111100 00000000110001010100000000
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+++ .++ + ..+ .
T Consensus 245 -~~~----------------------~~~-----------------------------------------~----~~~-~ 255 (471)
T PRK10504 245 -ARN----------------------NNR-----------------------------------------A----LFS-L 255 (471)
T ss_pred -Hhc----------------------CCC-----------------------------------------C----ccC-H
Confidence 000 000 0 011 3
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
+.+|+|.++......++............|++.+. +|.+ +.++......++..++.++.|++.||+|+| ..+
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~~ 330 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RVL 330 (471)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHH
Confidence 57888888877776666544443344556777775 6774 455677777888888889999999999998 555
Q ss_pred HHHHHHHHHHHHHHHhc--Cch--HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH
Q 008210 423 TCTQVIMIITYLLFASS--IDG--TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA 498 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~~~--~~~--~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~ 498 (574)
..+..+..++..++... ... ...+...+.|++.+..++.....+.+..|++.+|.++|+.++...+|.. +|+.+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~~i~ 409 (471)
T PRK10504 331 VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMS-IGVTIA 409 (471)
T ss_pred HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHH-HHHHHH
Confidence 55555555554444332 111 2334456667888877888888999999999999999999999999998 899999
Q ss_pred Hhhhhhhh
Q 008210 499 GYIYDNEA 506 (574)
Q Consensus 499 g~l~~~~~ 506 (574)
|.+.+..+
T Consensus 410 g~ll~~~g 417 (471)
T PRK10504 410 GLLLGLFG 417 (471)
T ss_pred HHHHHHhh
Confidence 99988753
No 31
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.95 E-value=3.7e-26 Score=242.47 Aligned_cols=402 Identities=13% Similarity=0.089 Sum_probs=253.2
Q ss_pred cHHHHHHHHHHHHhhh-ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHH
Q 008210 11 PWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFF 88 (574)
Q Consensus 11 ~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~ 88 (574)
+|..+...++...... ....+....|.+++ +|.+.++.+++.+...++..+ +++.|++.||+|||+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4655555444443332 24455666777776 599999999977666676654 99999999999999999999888888
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhcc-
Q 008210 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH- 166 (574)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~- 166 (574)
+.+.+... .... .+++.+++.|++.|++.|..++.....+.+++| ++||+++++...+.++|+.+++++......
T Consensus 104 ~~~~~~~~--~~~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 104 VMLLMGFV--PWAT-SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHhcc--cccc-chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 86553322 1111 256778889999999999888888888999997 689999999999999999898888765443
Q ss_pred CChhHHHHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHH
Q 008210 167 NSSSKLLLVLAVGVPAVCL-VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFI 245 (574)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (574)
...|+..+.+..+..++.. +..+++++.|++++.
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~--------------------------------------------- 215 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL--------------------------------------------- 215 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC---------------------------------------------
Confidence 3467776665444433322 222222211110000
Q ss_pred HHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhh
Q 008210 246 MIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEG 325 (574)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (574)
+++.+. + .+.+ + + ..
T Consensus 216 ---------------------~~~~~~------~------------~~~~----~----------~-~~----------- 230 (438)
T TIGR00712 216 ---------------------PPIEEY------R------------NDYP----D----------D-YN----------- 230 (438)
T ss_pred ---------------------CCchhc------c------------cccc----c----------c-cc-----------
Confidence 000000 0 0000 0 0 00
Q ss_pred ccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhh
Q 008210 326 EGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRL 402 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~ 402 (574)
++. ++ +...++...+..+|++.+|...+..++..........+.|.+.++ .|++ +.++..+++.+.+.++++
T Consensus 231 -~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 305 (438)
T TIGR00712 231 -EKA--EQ--ELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTL 305 (438)
T ss_pred -ccc--cc--ccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHH
Confidence 000 00 000000111246788999988776666554445566788888877 5774 456777788899999999
Q ss_pred hhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc---CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhh
Q 008210 403 GGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS---IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLIS 479 (574)
Q Consensus 403 ~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~ 479 (574)
++|+++||+++++.. ...........++..++... +....+....+.|++..+..........|.+|++++|++.
T Consensus 306 ~~g~l~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 383 (438)
T TIGR00712 306 LCGWMSDKVFKGNRG--ATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAA 383 (438)
T ss_pred HHHHHHHHhccCccc--HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeeh
Confidence 999999999765221 11111111122222222221 1222233334444432222222234677999999999999
Q ss_pred hhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 480 NFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 480 g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
|+.+....+++.+++|.+.|.+.|+. +|..+|+++.+..+++.+..+++++++|
T Consensus 384 g~~~~~~~~gg~~~gp~l~G~l~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 384 GFTGLFGYLGGSVAASAIVGYTVDFF---------------------GWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hhhchHHHhhhhhhcchhHHHHHHhc---------------------cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99998888875437999999999983 4888999888888888887777777665
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=6.2e-26 Score=243.74 Aligned_cols=418 Identities=11% Similarity=0.016 Sum_probs=246.4
Q ss_pred cHHHHHHHHHHHHhhhc-cchhhcchHHHHhhh--------CCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHH
Q 008210 11 PWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVL--------GFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLF 80 (574)
Q Consensus 11 ~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l--------~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~ 80 (574)
....+..+.+..+..+. ....+...|.++++| +.+..+.+++.+.+.++..+ +++.|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34444444444444443 223444456677766 88999999987777788765 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh----ccCC-hhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHH
Q 008210 81 IGSLACFFGYGVLWLAVSR----TVES-LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSA 154 (574)
Q Consensus 81 ~g~~~~~~g~~~~~~~~~~----~~~~-~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~ 154 (574)
++.+++.++.++..+.... ...+ ..++.++++|+++|++.|..++....++.|++| ++||+++++...+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999988886554321000 0011 125667889999999999999999999999998 689999999999998998
Q ss_pred HHHHHHHHHhc--------cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHh
Q 008210 155 AVFTEIYNMLL--------HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTT 226 (574)
Q Consensus 155 ~i~~~i~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (574)
.+.+.+...+. ...+||+.++...++.++..+..+++++.|++..+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~-------------------------- 223 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMS-------------------------- 223 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH--------------------------
Confidence 87765544332 23468877777666665554444444332211000
Q ss_pred hhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCC
Q 008210 227 ILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDL 306 (574)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (574)
++++++.+ ...++ ...+
T Consensus 224 ---------------------------------------~~~~~~~~-------~~~~~------~~~~----------- 240 (479)
T PRK10077 224 ---------------------------------------RGKQEQAE-------GILRK------IMGN----------- 240 (479)
T ss_pred ---------------------------------------cCCHHHHH-------HHHHH------HcCC-----------
Confidence 00000000 00000 0000
Q ss_pred CCCCCCCCchH-HHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHH---HHHHHhhcccceeeeccHHHHHHhhC
Q 008210 307 GSFRDNDDVSE-VALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLL---FLVYFAGVGSGVTVLNNLAQIGIAQG 382 (574)
Q Consensus 307 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g 382 (574)
++.++ .++. .... ++ ++. .. +..+.-...... ....+..........++.|.+.++.|
T Consensus 241 ------~~~~~~~~~~----~~~~--~~--~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g 302 (479)
T PRK10077 241 ------TLATQALQEI----KHSL--DH--GRK-TG---GKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLG 302 (479)
T ss_pred ------hhHHHHHHHH----HHHH--HH--hhh-hh---hhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcC
Confidence 00000 0000 0000 00 000 00 011110001111 11111111112223345677777788
Q ss_pred Cc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh---cCch--HHHHHHHHHhhhc
Q 008210 383 VH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS---SIDG--TLYAATALLGICY 455 (574)
Q Consensus 383 ~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~---~~~~--~l~~~~~l~g~~~ 455 (574)
.+ ...+......+.+.++.+++|+++||+||| .++..+.+.+.++.+++.. .+.. .......+.+++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 377 (479)
T PRK10077 303 ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF 377 (479)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 74 345565677888999999999999999999 5666677777776665432 1211 2222333444444
Q ss_pred cch-hhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHH
Q 008210 456 GVQ-FSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFV 534 (574)
Q Consensus 456 g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (574)
+.. .+....+++|.+|+++|+.+.|+.+....++.. +++.+++.+.+...-.+ ..++...|++
T Consensus 378 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~-~~~~~~p~~~~~~~~~~---------------~~~~~~~~~~ 441 (479)
T PRK10077 378 AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANY-FVSWTFPMMDKNSWLVA---------------HFHNGFSYWI 441 (479)
T ss_pred hccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHH-HHHHHhHHHHhccchhh---------------hccCccHHHH
Confidence 433 366778999999999999999999999999998 78767765542100000 0235677887
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh
Q 008210 535 LAGVCCVGSILSIILNIRIRPV 556 (574)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~ 556 (574)
.++.++++++..+.+.+|+|++
T Consensus 442 ~~~~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 442 YGCMGVLAALFMWKFVPETKGK 463 (479)
T ss_pred HHHHHHHHHHHHHhccccCCCC
Confidence 7777777766666566665543
No 33
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.95 E-value=2e-25 Score=233.32 Aligned_cols=347 Identities=11% Similarity=0.082 Sum_probs=238.6
Q ss_pred cccCcHHHHHHHHHHHHhhh-ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHH
Q 008210 7 GSRPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSL 84 (574)
Q Consensus 7 ~~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~ 84 (574)
.+|+.|..+........... ..|....+.|++.+++|++.++.++..+...++. +.+++.|++.||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~ 93 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAV 93 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 45667776555554443332 3455555678899999999999999655555555 459999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHH
Q 008210 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNM 163 (574)
Q Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~ 163 (574)
++.++++++.+. ++++.+++.|+++|++.|...+....++.+++| ++|+++.++...+.++|..+++++...
T Consensus 94 ~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~ 166 (394)
T PRK10213 94 LLTLSCLLVSFA-------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF 166 (394)
T ss_pred HHHHHHHHHHHH-------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999886653322 468999999999999999998989999999998 689999999999999999999999988
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHH
Q 008210 164 LLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASL 243 (574)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
+.+..+|++.+.+..+..++..+... +
T Consensus 167 l~~~~gw~~~f~~~~~l~~~~~l~~~--~--------------------------------------------------- 193 (394)
T PRK10213 167 LGELIGWRNVFNAAAVMGVLCIFWII--K--------------------------------------------------- 193 (394)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHH--H---------------------------------------------------
Confidence 87666677766544322221110000 0
Q ss_pred HHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Q 008210 244 FIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLA 323 (574)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (574)
. .|+ ++ + ++
T Consensus 194 -------------~--------~p~-------------------------~~----~------------~~--------- 202 (394)
T PRK10213 194 -------------S--------LPS-------------------------LP----G------------EP--------- 202 (394)
T ss_pred -------------H--------CCC-------------------------CC----c------------cc---------
Confidence 0 000 00 0 00
Q ss_pred hhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccH-HHHHHhhCCc--hhhHHHHHHHHHHhhh
Q 008210 324 EGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNL-AQIGIAQGVH--DTTILLSLFSFCNFVG 400 (574)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~--~~~~~~~~~~i~~~ig 400 (574)
+ + .....++.+|+|.+|...+..++..........+. |.+.++.|++ +.+.......++..++
T Consensus 203 --------~---~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig 268 (394)
T PRK10213 203 --------S---H---QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVG 268 (394)
T ss_pred --------c---c---chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHH
Confidence 0 0 00123467788888876655444433333333444 5566667775 3466777888899999
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhh
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLIS 479 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~ 479 (574)
+++.+++.||.+++ .++....+.....+.+... .+...+.+..++.|++.+...+..+..+++..| ++.+.+.
T Consensus 269 ~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~ 342 (394)
T PRK10213 269 TSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAG 342 (394)
T ss_pred HHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHH
Confidence 99999999985433 2233222223333333222 233455567778888888888888878888886 5677888
Q ss_pred hhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 480 NFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 480 g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
++.....+++.. +||.++|+++|..
T Consensus 343 ~~~~~~~~lg~~-~G~~l~G~l~~~~ 367 (394)
T PRK10213 343 SIQVAVIQLANT-CGAAIGGYALDNI 367 (394)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhcc
Confidence 887778888887 8999999999974
No 34
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=5e-26 Score=245.61 Aligned_cols=425 Identities=10% Similarity=-0.042 Sum_probs=251.6
Q ss_pred cCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhh-----hCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSV-----LGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFI 81 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~-----l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~ 81 (574)
++++..+..+.+..+..|. ....+...|.+.++ .+.+..+.+++.+...++..+ +++.|+++||+|||+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 3444444444444444444 33445555666554 235566778887777787765 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHH
Q 008210 82 GSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEI 160 (574)
Q Consensus 82 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i 160 (574)
+.+++.++.+++..... .....+++.++++|++.|++.|..++....++.+++| ++||+++++......+|..+++.+
T Consensus 92 ~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 92 ELIIMIIATVASGLSPG-SSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHHccC-cccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888665433211 0010126788999999999999999999999999998 689999999999988888777777
Q ss_pred HHHhcc-----------------------CChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHH
Q 008210 161 YNMLLH-----------------------NSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVV 217 (574)
Q Consensus 161 ~~~l~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (574)
...+.. .+.||+.+.++.+|.++.++..+++++.|++..++++.+..... ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~--~~--- 245 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAAS--DM--- 245 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHH--HH---
Confidence 654321 13699999988888888888778887776542211111000000 00
Q ss_pred HHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCC
Q 008210 218 LGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLL 297 (574)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (574)
.+..+++. .++.
T Consensus 246 --------------------------------------------~~~~~~~~----------------------~~~~-- 257 (502)
T TIGR00887 246 --------------------------------------------SAVLQVKI----------------------EAEP-- 257 (502)
T ss_pred --------------------------------------------HHHhcccc----------------------ccCc--
Confidence 00000000 0000
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhc---hhH----HHHHHHHHhhcccceee
Q 008210 298 DPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVK---ADF----WLLFLVYFAGVGSGVTV 370 (574)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~----~~~~~~~~~~~~~~~~~ 370 (574)
+ +.. + . +++ .+. .+.++++++++ +.. +......++........
T Consensus 258 -------------~-~~~-----------~-~--~~~-~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 307 (502)
T TIGR00887 258 -------------D-EVE-----------K-A--STA-VEV-PKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGV 307 (502)
T ss_pred -------------c-ccc-----------c-h--hcc-ccc-hhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0 000 0 0 000 000 01123444432 111 11122222222223344
Q ss_pred eccHHHHHHhhCCchh--h------------HHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHH
Q 008210 371 LNNLAQIGIAQGVHDT--T------------ILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLF 436 (574)
Q Consensus 371 ~~~~~~~~~~~g~~~~--~------------~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~ 436 (574)
..+.|.+.++.|++.. . .......++..++.++++++.||+||| .++..+...+.+++.++
T Consensus 308 ~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR-----~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 308 NLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK-----PIQLMGFFILTVLFFVL 382 (502)
T ss_pred ccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-----hHHHHHHHHHHHHHHHH
Confidence 5568888888887421 1 023334456677899999999999999 44555555555544433
Q ss_pred Hh--c--CchHHHHHHHHH-hhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcc
Q 008210 437 AS--S--IDGTLYAATALL-GICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQG 511 (574)
Q Consensus 437 ~~--~--~~~~l~~~~~l~-g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~ 511 (574)
.. . +.........+. .++..+..+....+.+|.+|++.|+++.|+.+..+.++++ ++|.+.+++.|..++..+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~- 460 (502)
T TIGR00887 383 GFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAI-IGQFGFLYLAQHGDPTKG- 460 (502)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHH-HHHHHhhhhhcccccccc-
Confidence 32 1 111111222222 2222233456667789999999999999999999999998 899999999885321100
Q ss_pred cccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008210 512 FNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIRP 555 (574)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (574)
. +...++...|++.+++++++.+.. ++.+|+++
T Consensus 461 --------~--~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 461 --------Y--PTGIWMGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred --------c--cccccchHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 0 000135667888887777765544 44455554
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=5.2e-25 Score=237.64 Aligned_cols=396 Identities=14% Similarity=0.080 Sum_probs=244.3
Q ss_pred ccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHH
Q 008210 8 SRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLA 85 (574)
Q Consensus 8 ~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~ 85 (574)
++++|..+....+..+..+. .+..+...|.+.+++|++..+.+++.+...++..+ +++.|++.||+|||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 35567666665555554444 44566777999999999999999976666676655 99999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
.+++++++.+. ++++.+++.|++.|++.+..++....++.+++| ++|+++.++...+..+|..+++.+...+
T Consensus 95 ~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 95 FSVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887664432 368899999999999999988888999999998 5799999999999999999999999888
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCc-c--hhhH-------HHHHHHHHHHHHHHhhhcccCCC
Q 008210 165 LHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPS-H--FLFT-------QAASVVLGFFLLTTTILDHMIPL 234 (574)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 234 (574)
.+..+|++.+.+++++.++.+......++.+++..++++... . .... .................. .
T Consensus 168 ~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 243 (496)
T PRK03893 168 VPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFA-G--- 243 (496)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHH-h---
Confidence 877789988887766655544333333332221111101000 0 0000 000000000000000000 0
Q ss_pred chhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008210 235 SASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDD 314 (574)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (574)
............+.+....+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------- 267 (496)
T PRK03893 244 NLQNAAIVAVLGLLCAAIFISFMV-------------------------------------------------------- 267 (496)
T ss_pred hhcchhHHHHHHHHHHHHHHHHHH--------------------------------------------------------
Confidence 000000000000000000000000
Q ss_pred chHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHH-hhCCc--hhhHHHH
Q 008210 315 VSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVH--DTTILLS 391 (574)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--~~~~~~~ 391 (574)
+.. + .+.+.........+...........++|.+.+ ++|++ +.+...+
T Consensus 268 -----------------~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~ 318 (496)
T PRK03893 268 -----------------QSS-G-----------KRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLF 318 (496)
T ss_pred -----------------Hhc-c-----------cchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 000 0 00111222222222222222234456788885 57774 5677888
Q ss_pred HHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH-hcCch--HHHHHHHHHhhhccchhhhHHHHHHh
Q 008210 392 LFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA-SSIDG--TLYAATALLGICYGVQFSIMIPTVSE 468 (574)
Q Consensus 392 ~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~-~~~~~--~l~~~~~l~g~~~g~~~~~~~~~~~~ 468 (574)
...++..+++++.|+++||++|| ..+..+..+..++.++.. ..+.. .......+.++...+..+..+.+++|
T Consensus 319 ~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (496)
T PRK03893 319 FSGFGAAVGCCVGGFLGDWLGTR-----KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGG 393 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHh
Confidence 89999999999999999999988 444444444444433322 22222 22222233333323345667788999
Q ss_pred hcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 469 LFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 469 ~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
.+|++++|+++|+.+....+++. +||.+.|.+.|+.
T Consensus 394 ~~~~~~~g~~~~~~~~~~~~g~~-lgp~l~g~l~~~~ 429 (496)
T PRK03893 394 YFDTEQRAAGLGFTYNVGALGGA-LAPILGALIAQRL 429 (496)
T ss_pred hCCHHHhhcccchhhhhhhHHHH-HHHHHHHHHhccC
Confidence 99999999999999999999998 8999999999984
No 36
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=2.6e-25 Score=235.75 Aligned_cols=378 Identities=9% Similarity=0.041 Sum_probs=229.7
Q ss_pred cCcHHHHHHHHHHHHhhhc-cchhhcchHH-HHhhh--CCCHHHHHHHHH-----HHHhhhhc-cccchhccccCCChHH
Q 008210 9 RPPWVGLGAAVWVQIAAGN-AYNFPLYSHS-LKSVL--GFNQHQLTMLGV-----ANDIGENV-GLLPGLASNKFPPWLV 78 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~-l~~~l--~~s~~~~~~i~~-----~~~~~~~~-~~~~G~l~dr~G~r~~ 78 (574)
.++|..+..+++..+..+. ...++.+.|. +.+++ +.++. .+++.+ ...++..+ +++.|+++||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 3556665555555554444 4456666654 45555 56665 455322 12222323 7889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCChhHH--------HHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhh
Q 008210 79 LFIGSLACFFGYGVLWLAVSRTVESLPYW--------LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGY 149 (574)
Q Consensus 79 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~ 149 (574)
+.++.++++++++++.+ ++ +++ .++++|+++|++.|..++....++.|++| ++||+..+....+
T Consensus 97 l~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g 169 (438)
T PRK09952 97 LMLTVWMMGIATALIGL-----LP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVG 169 (438)
T ss_pred HHHHHHHHHHHHHHHhc-----CC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 99999999998766433 22 344 57788999999999999999999999998 6899999999999
Q ss_pred hhhHHHHHHHHHHHhcc--------CChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHH
Q 008210 150 GGLSAAVFTEIYNMLLH--------NSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFF 221 (574)
Q Consensus 150 ~~~g~~i~~~i~~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (574)
..+|..+++.+...+.. ..+||+.+.+..++.++.. +++..
T Consensus 170 ~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~----~l~~~--------------------------- 218 (438)
T PRK09952 170 YGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL----WVRNG--------------------------- 218 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH----HHHHh---------------------------
Confidence 98988887666554321 2356655554443322211 01000
Q ss_pred HHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCC
Q 008210 222 LLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSS 301 (574)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (574)
.+| .++.
T Consensus 219 ---------------------------------------------~~e----------------------s~~~------ 225 (438)
T PRK09952 219 ---------------------------------------------MEE----------------------SAEF------ 225 (438)
T ss_pred ---------------------------------------------CCC----------------------ChhH------
Confidence 000 0000
Q ss_pred CCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHH-HHhhcccceeeeccHHHHHHh
Q 008210 302 STTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLV-YFAGVGSGVTVLNNLAQIGIA 380 (574)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 380 (574)
+ ++. ++ +++ ++. +.......++++..|..... .++..........+.+.+.++
T Consensus 226 --------~--~~~-----------~~---~~~-~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 279 (438)
T PRK09952 226 --------E--QQQ-----------HE---QAA-AKK-RIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQ 279 (438)
T ss_pred --------H--HHH-----------hh---ccc-ccc-cCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 00 000 000 00111235566666665432 233222333344566776654
Q ss_pred -hCCchh--hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH--h-c-Cch-HHHHHHHHHh
Q 008210 381 -QGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA--S-S-IDG-TLYAATALLG 452 (574)
Q Consensus 381 -~g~~~~--~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~--~-~-~~~-~l~~~~~l~g 452 (574)
+|+++. .......++...++.++.|+++||+||| ..+..+.++..++...+. . . +.. .++....+.+
T Consensus 280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (438)
T PRK09952 280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLAN 354 (438)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 677543 2333455677788999999999999999 334444444333332221 1 1 222 2233445557
Q ss_pred hhccchhhhHHHHHHhhcCccchhhhhhhhhhh-hhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhH
Q 008210 453 ICYGVQFSIMIPTVSELFGLEHFGLISNFLALG-NPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRIT 531 (574)
Q Consensus 453 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (574)
++.+...+..+++++|.+|++.|+.+.|+.+.. ..+++. ++|.+.+++.|... ++|...
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~-~~p~i~g~l~~~~~-------------------~~~~~~ 414 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGG-FTPFIAAALVTYFG-------------------GSWHSV 414 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHH-HHHHHHHHHHHhcC-------------------CCchHH
Confidence 777777788889999999999999999996654 457887 89999999988631 237777
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008210 532 FFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~ 549 (574)
+....++.+++++..+.+
T Consensus 415 ~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 415 AIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 777777777766655433
No 37
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=2.2e-25 Score=239.84 Aligned_cols=382 Identities=11% Similarity=0.052 Sum_probs=258.8
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
........|.+.+++|.+..+.+|+.+.+.++..+ .++.|++.||+|||+++.++.+++.++.+++. .. +++
T Consensus 18 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-----~~--~~~ 90 (485)
T TIGR00711 18 STIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG-----VA--PNL 90 (485)
T ss_pred HHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh-----Cc--CCH
Confidence 34556778999999999999999987777777765 99999999999999999999999998866632 22 368
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|+++|++.+...+....++.+++| ++|+++.++...+..+|..+++.+.+.+.+..+|++.++...++.++..
T Consensus 91 ~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~ 170 (485)
T TIGR00711 91 ELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVV 170 (485)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHH
Confidence 899999999999999998999999999998 6899999999999999999999998888877788888887776666555
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhc-ccCCCchh-hhhhHHHHHHHHHhhhhcccccchhc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILD-HMIPLSAS-ISYASLFIMIILLMAPLAIPVKMTIC 263 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (574)
+...+..+.+++. + .++ .+.........+.......... ....+.++ ............+..+.
T Consensus 171 ~~~~~~~~~~~~~-~--~~~--~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 236 (485)
T TIGR00711 171 VVAFFILPRDKPA-A--SEN--FDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFV--------- 236 (485)
T ss_pred HHHHHHcCCcccc-c--cCC--CcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHH---------
Confidence 5443333222111 1 111 1111111011010000000000 00000000 00000000000000000
Q ss_pred ccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCcc
Q 008210 264 RKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFK 343 (574)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (574)
..+. ++ ++ +..
T Consensus 237 --------------------------------------------------------------~~~~--~~--~~---~~~ 247 (485)
T TIGR00711 237 --------------------------------------------------------------VWEL--TD--DN---PLV 247 (485)
T ss_pred --------------------------------------------------------------HHHH--cC--CC---Ccc
Confidence 0000 00 00 011
Q ss_pred HHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh
Q 008210 344 FTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI 420 (574)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~ 420 (574)
..+.+|+|.++...+..++..........+.|.+.++ .|++ +.+.......++..+++++.|++.||++|| +
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~ 322 (485)
T TIGR00711 248 DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----K 322 (485)
T ss_pred CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----H
Confidence 1467888888877666666555445555678888876 5774 566777888899999999999999999998 5
Q ss_pred hHHHHHHHHHHHHHHHHh--c--Cc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhH
Q 008210 421 WMTCTQVIMIITYLLFAS--S--ID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~~--~--~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 495 (574)
.+.++..+..++..++.. . .+ ...+....+.|++.+..++.......+..|++++|.+.|+.++...+|+. +|+
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~ 401 (485)
T TIGR00711 323 LVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGS-IGT 401 (485)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHH-HHH
Confidence 666666777777666541 1 12 24455677888888888777777778889999999999999999999998 899
Q ss_pred hHHHhhhhhh
Q 008210 496 LLAGYIYDNE 505 (574)
Q Consensus 496 ~l~g~l~~~~ 505 (574)
.+.|.+.++.
T Consensus 402 ~i~g~~~~~~ 411 (485)
T TIGR00711 402 ALITTILTNR 411 (485)
T ss_pred HHHHHHHHHH
Confidence 9999998853
No 38
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.95 E-value=4.5e-26 Score=217.75 Aligned_cols=247 Identities=48% Similarity=0.865 Sum_probs=226.2
Q ss_pred cHHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccCCChHHHHHHHHHHHHHH
Q 008210 11 PWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFPPWLVLFIGSLACFFGY 90 (574)
Q Consensus 11 ~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~ 90 (574)
||..++++++++.+.|..|.|+.|.|++++.+|+|++|.+.++++..+|..++++.|.+.||+|+|.++.+|.+...+||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999899999999999999999999999999999
Q ss_pred HHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCChh
Q 008210 91 GVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSS 170 (574)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~ 170 (574)
.++++++.+..+++++|+++++.++.|.|.+..+.++.....++||++||++.|+..+.+|+++.++..+...+++++..
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999988766899999999999999988889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCC--CCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHH
Q 008210 171 KLLLVLAVGVPAVCLVMMYFVRPCTPAS--GEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMII 248 (574)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (574)
.+++++++.|.+++++.++++|+.|+++ .+++++++.+......++.+++|.+...+.++..+.++.......++.+.
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999887642 23445566666666777888999999888889998888888888888888
Q ss_pred HHhhhhccc
Q 008210 249 LLMAPLAIP 257 (574)
Q Consensus 249 ~~~~~~~~~ 257 (574)
++.+|+.+|
T Consensus 241 lL~~Pl~i~ 249 (250)
T PF06813_consen 241 LLLLPLAIP 249 (250)
T ss_pred HHHhhhhcc
Confidence 888998876
No 39
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=2.3e-26 Score=248.71 Aligned_cols=381 Identities=13% Similarity=0.111 Sum_probs=250.1
Q ss_pred cchhhcchHHHHhhhCCC---HHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008210 28 AYNFPLYSHSLKSVLGFN---QHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s---~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 103 (574)
.|.++.+.+.+.+|++++ ..+.+++.+.+.++.++ +++.|+++||+|||+++.++.++..++.++..+ +
T Consensus 105 ~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-----~-- 177 (505)
T TIGR00898 105 EYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF-----S-- 177 (505)
T ss_pred EecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----c--
Confidence 344446778899999999 89999988888888876 999999999999999999999988888655332 2
Q ss_pred hhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 008210 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPA 182 (574)
Q Consensus 104 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~ 182 (574)
++++.+++.|++.|++.+..++....++.+++| ++|+++.++...++.+|.++.+.+...+. .|++.+.+..++.+
T Consensus 178 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~ 254 (505)
T TIGR00898 178 PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTF 254 (505)
T ss_pred ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHH
Confidence 468999999999999999999999999999998 57999999999999899888777665442 38888888877777
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchh
Q 008210 183 VCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTI 262 (574)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (574)
+..+..+++++.|++...+.+.+........ .
T Consensus 255 ~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~------------------------------------------------~ 286 (505)
T TIGR00898 255 LFFLLSWFVPESPRWLISQGRIEEALKILQR------------------------------------------------I 286 (505)
T ss_pred HHHHHHHhcCCChHHHHHCCCHHHHHHHHHH------------------------------------------------H
Confidence 7666666665544321110000000000000 0
Q ss_pred cccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCc
Q 008210 263 CRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDF 342 (574)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (574)
. +++ +.+. +++.... +.+++. + +..+..
T Consensus 287 ~-~~~-----------------------~~~~--------------------~~~~~~~--~~~~~~---~---~~~~~~ 314 (505)
T TIGR00898 287 A-KIN-----------------------GKKL--------------------PAEVLSL--SLEKDL---S---SSKKQY 314 (505)
T ss_pred H-HHc-----------------------CCCC--------------------CHHHHhh--hhhhhh---h---hccCCC
Confidence 0 000 0000 0000000 000000 0 001123
Q ss_pred cHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCchhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 343 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
++++++++|.++...+...+.+.......+.++......+.+ ........++...++.++.+++.||+||| ..+
T Consensus 315 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~ 388 (505)
T TIGR00898 315 SFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGN-IYLDLFISGLVELPAKLITLLLIDRLGRR-----YTM 388 (505)
T ss_pred cHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHH
Confidence 567888998887766555443322211111122222223333 23334456777889999999999999999 566
Q ss_pred HHHHHHHHHHHHHHHhc-Cc--hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHH
Q 008210 423 TCTQVIMIITYLLFASS-ID--GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAG 499 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~~~-~~--~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g 499 (574)
..+.++.+++++++... +. .......++.+++.+..++....+.+|.+|++.|+.+.|+.++...+|+. ++|.+.+
T Consensus 389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~-i~p~i~~ 467 (505)
T TIGR00898 389 AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSI-ISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHH-HHhHHHH
Confidence 66666666666555432 22 23344455566777777888889999999999999999999999999998 8998888
Q ss_pred hhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHH
Q 008210 500 YIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 500 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
+.+. ++...+++.+++.+++.++.++
T Consensus 468 -~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 468 -LGEK----------------------WLFLPLVLFGGLALLAGILTLF 493 (505)
T ss_pred -HHHH----------------------HHhhHHHHHHHHHHHHHHHHHc
Confidence 4333 2455677777766666555443
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=9.7e-25 Score=227.43 Aligned_cols=346 Identities=12% Similarity=0.084 Sum_probs=231.0
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.+......|.+++++|.+.++.+++.+...++..+ +++.|++.||+|||+++.++.++..++.+++.+ + +++
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~-----~--~~~ 91 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL-----S--SSY 91 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH-----h--CcH
Confidence 34555677899999999999999977777777765 999999999999999999999999988665332 2 368
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|++.|++.+...+.....+.+++|+ +|++++++...+..+|..+++++...+.+..+|++.+.+..+..++..
T Consensus 92 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 92 LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVL 171 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 9999999999999998887777888999984 799999999999999999999988877665567766654433222211
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
+..+.. .|.
T Consensus 172 ~~~~~~----------------------------------------------------------------lp~------- 180 (382)
T PRK10091 172 ASIYFW----------------------------------------------------------------VPD------- 180 (382)
T ss_pred HHHHHh----------------------------------------------------------------CCC-------
Confidence 111000 000
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+ ++++ +.. . ....
T Consensus 181 -~------------------------~~~~-----------------~~~----------------~---------~~~~ 193 (382)
T PRK10091 181 -I------------------------RDEA-----------------KGG----------------L---------REQF 193 (382)
T ss_pred -C------------------------Cccc-----------------ccC----------------H---------HHHH
Confidence 0 0000 000 0 0012
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
+.+|++.+|......++.....+....+.+++.++ .|.+ +.+...+...++..+++++.|++.||+++| ..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~ 268 (382)
T PRK10091 194 HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIA 268 (382)
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHH
Confidence 45667777776555444322222233345555554 6774 466778889999999999999999999988 445
Q ss_pred HHHHHHHHHHHHHHHh-cC-chHHHHHHHHHhhhccchhh-hHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHH
Q 008210 423 TCTQVIMIITYLLFAS-SI-DGTLYAATALLGICYGVQFS-IMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAG 499 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~~-~~-~~~l~~~~~l~g~~~g~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g 499 (574)
..+..+..++.+++.. .+ .....+...+.+++.+...+ .......+..+.+..+.+. .+....+|.. +||.+.|
T Consensus 269 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~-~Gp~~~G 345 (382)
T PRK10091 269 AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSA-IGAYCGG 345 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHH-HHHHHhH
Confidence 5555566666544432 22 22333344444554433333 2223445555656666553 3566788888 9999999
Q ss_pred hhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 500 YIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 500 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
.+.|.+ .+|+..+.+.++.+++.....
T Consensus 346 ~l~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 346 MMLTLG--------------------LAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHcc--------------------cCcchHHHHHHHHHHHHHHHH
Confidence 999974 358888888766655554433
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=8.7e-25 Score=227.71 Aligned_cols=340 Identities=14% Similarity=0.090 Sum_probs=231.1
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
......+.|.+.+++|.|..+++++.+.+.++..+ +++.|++.||+|||+++.++.++..+++..+.+. +++
T Consensus 22 ~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~ 94 (381)
T PRK03633 22 IAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM-------VGF 94 (381)
T ss_pred hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccH
Confidence 34455678889999999999999987777777765 9999999999999999999999998886654332 368
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|+++|++.+...+.....+.++.| ++|++++++...+..+|..+++.+...+.+...+...+...
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~-------- 166 (381)
T PRK03633 95 WSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTG-------- 166 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHH--------
Confidence 899999999999999887776677777776 68999999999999999999888877653321111000000
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
..... ..++.. .+
T Consensus 167 ------------------------------~~~~~------------------------------~~~~~~-~~------ 179 (381)
T PRK03633 167 ------------------------------LVLAA------------------------------ILPLLF-TR------ 179 (381)
T ss_pred ------------------------------HHHHH------------------------------HHHHHH-hc------
Confidence 00000 000000 00
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
.+++ ++ + ++ + ..+.+
T Consensus 180 ~~~~------------------------~~-----------------~------------------~~--~----~~~~~ 194 (381)
T PRK03633 180 ILNQ------------------------QA-----------------E------------------NH--D----STSIW 194 (381)
T ss_pred ccCC------------------------CC-----------------C------------------CC--C----CCCHH
Confidence 0000 00 0 00 0 01234
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMT 423 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~ 423 (574)
+.+|+|.++......+...........++|.+.++.|.+ +.+...+...++..++++..|++.||+++| ..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~ 269 (381)
T PRK03633 195 PMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLR 269 (381)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHH
Confidence 566777776544333222222222334678888887875 456777888899999999999999999998 4555
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 424 CTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 424 ~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
.+.....++...+. .....+....+.|++.+..+|.....+.|..|+++++...+..+...++|+. +||.+.|++.|
T Consensus 270 ~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-igp~~~G~l~~ 346 (381)
T PRK03633 270 VQVFVVILGSIAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL-LGPSFTAMLMQ 346 (381)
T ss_pred HHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 55555555544432 1222333455666665566777777888989888888888888888899998 99999999999
Q ss_pred hhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHH
Q 008210 504 NEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGS 543 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
+. +++..|.+.+.+.+++.
T Consensus 347 ~~---------------------g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 347 NY---------------------SDNLLFIMIASVSFIYL 365 (381)
T ss_pred Hh---------------------CccHHHHHHHHHHHHHH
Confidence 84 47778887766665443
No 42
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.94 E-value=8.3e-25 Score=229.89 Aligned_cols=359 Identities=12% Similarity=-0.005 Sum_probs=238.3
Q ss_pred CccccccccCcHHHHHHHHHHHHhhh-ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHH
Q 008210 1 MVTLKAGSRPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLV 78 (574)
Q Consensus 1 ~~~~~~~~~~~w~~~~~~~l~~~~~g-~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~ 78 (574)
|.+.++..++.|...+...+..+... ....+....|.+++++|.+..+.++..+.+.++..+ +++.|.++||+|||++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~ 80 (406)
T PRK15402 1 LSPLARLGRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPV 80 (406)
T ss_pred CChHHHhhHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 34555555666666666666665433 244455567889999999999999976666676655 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHH
Q 008210 79 LFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVF 157 (574)
Q Consensus 79 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~ 157 (574)
+.++.++..++++++... ++++.+++.|+++|++.+...+.....+.+++| ++|+++.++......+|..++
T Consensus 81 l~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g 153 (406)
T PRK15402 81 MLAGVAFFILTCLAILLA-------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLG 153 (406)
T ss_pred HHHHHHHHHHHHHHHHHH-------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 999998888886664332 367888999999999999887888888999998 478888898888877888888
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchh
Q 008210 158 TEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSAS 237 (574)
Q Consensus 158 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (574)
|.+...+.+...|++.+.+..+..++..+..+..
T Consensus 154 ~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 187 (406)
T PRK15402 154 PLVGAALIHVLPWRGMFVLFAALAALSFFGLWRA---------------------------------------------- 187 (406)
T ss_pred HHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHh----------------------------------------------
Confidence 8887776555556555543332222221111100
Q ss_pred hhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchH
Q 008210 238 ISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSE 317 (574)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (574)
.+ +++ .+++ ++.+.
T Consensus 188 ------------------~~---------~~~----------------------~~~~-----------------~~~~~ 201 (406)
T PRK15402 188 ------------------MP---------ETA----------------------GRVG-----------------EKLSL 201 (406)
T ss_pred ------------------CC---------CCC----------------------cccc-----------------ccccH
Confidence 00 000 0000 00000
Q ss_pred HHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCch--hhHHHHHHH
Q 008210 318 VALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVHD--TTILLSLFS 394 (574)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~ 394 (574)
.+....+++.+++|.+|...+..++..........+.|.+.++ .|.++ .+.......
T Consensus 202 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~ 261 (406)
T PRK15402 202 --------------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVF 261 (406)
T ss_pred --------------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHH
Confidence 0001123567888888877666554433222333445666544 67753 445555667
Q ss_pred HHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-----cC-chHHHHHHHHHhhhccchhhhHHHHHHh
Q 008210 395 FCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-----SI-DGTLYAATALLGICYGVQFSIMIPTVSE 468 (574)
Q Consensus 395 i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-----~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~ 468 (574)
++..+++++.|++.||+++| ..+.++.+...++..++.. .+ ....++...+.|++.+...+........
T Consensus 262 ~~~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~ 336 (406)
T PRK15402 262 GALIAGNLTLARLTSRRPLR-----SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF 336 (406)
T ss_pred HHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh
Confidence 78889999999999999988 4455555555555554432 11 2234556677788877766655444433
Q ss_pred hcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 469 LFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 469 ~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
. +++++|++.++.+....++.. +|+.+.+.+++..
T Consensus 337 ~-~~~~~g~~~~~~~~~~~~~~~-~g~~~~~~l~~~~ 371 (406)
T PRK15402 337 S-SDVSKGTVSAAMGMLSMLIFT-VGIELSKHAYLGG 371 (406)
T ss_pred h-ccccccHHHHHHHHHHHHHHH-HHHHHHHhcccCC
Confidence 3 348899999999999999998 8999999998874
No 43
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=1.5e-24 Score=227.47 Aligned_cols=355 Identities=15% Similarity=0.062 Sum_probs=229.3
Q ss_pred chHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHH
Q 008210 34 YSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (574)
Q Consensus 34 ~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (574)
+.+++.+++|.+.++.+++.+.+.++..+ +++.|++.||+|||+++..+.++..++.+++.. .+... ++++.+++.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~--~~~~~-~~~~~l~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIV--FGLGH-ANYPLILLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH--HhccC-ccHHHHHHH
Confidence 34556688999999999976666676654 999999999999999999999998888544211 12222 357788889
Q ss_pred HHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHH-HHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHh
Q 008210 113 LCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSA-AVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYF 190 (574)
Q Consensus 113 ~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~-~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (574)
|++.|+|.+...+.....+.+++| ++||+++|+...+.++|. .+++.+...+.+..+|+...+.......+..+.
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~--- 188 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVI--- 188 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH---
Confidence 999999998877767777788886 789999999999998886 456666655544322211111000000000000
Q ss_pred cccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCccc
Q 008210 191 VRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSES 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (574)
..+.. + ++
T Consensus 189 -------------------------------------------------------------~~~~~--~-------~~-- 196 (402)
T TIGR00897 189 -------------------------------------------------------------ALFSN--K-------DI-- 196 (402)
T ss_pred -------------------------------------------------------------HHhcc--C-------CC--
Confidence 00000 0 00
Q ss_pred ccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhc
Q 008210 271 GILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVK 350 (574)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (574)
++| ++ + +++ ++ .+ +....+++.+|+
T Consensus 197 ----------------------~~~---~~---------~--~~~----------------~~--~~-~~~~~~~~~~~~ 221 (402)
T TIGR00897 197 ----------------------FTP---QH---------M--QTR----------------EK--FS-ELGKAATILFTN 221 (402)
T ss_pred ----------------------CCc---cc---------c--cCC----------------cc--hh-hHHHHHHHHHcC
Confidence 000 00 0 000 00 00 001123567889
Q ss_pred hhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHH
Q 008210 351 ADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVI 428 (574)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 428 (574)
|.+|...+..++..........+.|.+.++.|++ +.+...+...+++.++++..|+++||++||+. ....+.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~----~~~~~~l~ 297 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT----VRWFGGVG 297 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH----HHHHHHHH
Confidence 9998877776665555555667888888888885 44566677889999999999999999998831 11122222
Q ss_pred HHHHHHHH---Hh--cC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 429 MIITYLLF---AS--SI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 429 ~~i~~~~~---~~--~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
..++...+ .. .+ ....++...+.|++.+...+. ...+.|.. ++++|+++|+.+....+++. ++|.+.|.+.
T Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~-~gp~i~g~l~ 374 (402)
T TIGR00897 298 CGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAF-LAPAIAVLFI 374 (402)
T ss_pred HHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 22221111 11 12 224455667777776665443 44566654 57899999999999999998 8999999999
Q ss_pred hhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 503 DNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
|.. ++...+++.+++.+++.++.+++
T Consensus 375 ~~~---------------------g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 375 GFF---------------------GAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred hhc---------------------chHHHHHHHHHHHHHHHHHHHHh
Confidence 984 47888888888877776666554
No 44
>PRK15075 citrate-proton symporter; Provisional
Probab=99.94 E-value=1.4e-24 Score=230.17 Aligned_cols=351 Identities=12% Similarity=0.063 Sum_probs=216.8
Q ss_pred ccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHH-HHHHHHh--hh----hccccchhccccCCChHHH
Q 008210 8 SRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTM-LGVANDI--GE----NVGLLPGLASNKFPPWLVL 79 (574)
Q Consensus 8 ~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~-i~~~~~~--~~----~~~~~~G~l~dr~G~r~~~ 79 (574)
++.||+.....++..+.... ...++...|.++++++.++++.++ ..+...+ +. +.+++.|++.||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 10 RESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 34556665555555555554 667888899999999998887655 3332222 22 2378899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHH--------HHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhh
Q 008210 80 FIGSLACFFGYGVLWLAVSRTVESLPYW--------LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYG 150 (574)
Q Consensus 80 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~ 150 (574)
..+.+++.++++++.+ ++ +++ .+++.|+++|++.|...+....++.+|+| ++||+++++...+.
T Consensus 90 ~~~~~~~~~~~~l~~~-----~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~ 162 (434)
T PRK15075 90 IVTLSIMASGTLLIAF-----VP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQ 162 (434)
T ss_pred HHHHHHHHHHHHHHHh-----CC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHH
Confidence 9999999988766433 22 344 46788999999999988888899999998 68999999998887
Q ss_pred hhHHHHHHHHHHHhc--------cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHH
Q 008210 151 GLSAAVFTEIYNMLL--------HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFL 222 (574)
Q Consensus 151 ~~g~~i~~~i~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (574)
.+|..+++.++..+. +..+||+.+.++++...+. ++.+
T Consensus 163 ~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~----~~~~------------------------------ 208 (434)
T PRK15075 163 QVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI----FLIR------------------------------ 208 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH----HHHH------------------------------
Confidence 777766666655431 1234555444322111000 0000
Q ss_pred HHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCC
Q 008210 223 LTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSS 302 (574)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (574)
.+++|.
T Consensus 209 ------------------------------------------~~~~e~-------------------------------- 214 (434)
T PRK15075 209 ------------------------------------------RSLEET-------------------------------- 214 (434)
T ss_pred ------------------------------------------HhcCCC--------------------------------
Confidence 000000
Q ss_pred CCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHH-HHHhhcccceeeeccHHHHHHh-
Q 008210 303 TTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFL-VYFAGVGSGVTVLNNLAQIGIA- 380 (574)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~- 380 (574)
++.. ++ +++ + .....+++..+++..+.... ..++..........+.|.++++
T Consensus 215 ----------~~~~----------~~---~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 268 (434)
T PRK15075 215 ----------EEFL----------AR---KHR-P--SMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV 268 (434)
T ss_pred ----------HHHH----------Hh---hhc-c--ccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 00 000 0 00011223344444444322 2222222333455678888876
Q ss_pred hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHH-HHHHH--HhcCch--HHHHHHHHHhh
Q 008210 381 QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMII-TYLLF--ASSIDG--TLYAATALLGI 453 (574)
Q Consensus 381 ~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i-~~~~~--~~~~~~--~l~~~~~l~g~ 453 (574)
+|++ +..+......+++.++++++|+++||+||| .....+.....+ ..... ...++. .......+.++
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK15075 269 LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSF 343 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 6875 445666678888999999999999999998 333332222221 21111 112221 22333455566
Q ss_pred hccchhhhHHHHHHhhcCccchhhhhhhhhhhh-hhHHHHHhHhHHHhhhhhh
Q 008210 454 CYGVQFSIMIPTVSELFGLEHFGLISNFLALGN-PLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 454 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~lg~~~~gp~l~g~l~~~~ 505 (574)
+.+...+....+..|.+|++.++.+.|+.+... .+++. ++|.+.|++.|+.
T Consensus 344 ~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~-~~p~~~g~i~~~~ 395 (434)
T PRK15075 344 LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGG-FTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhh-hHHHHHHHHHHhc
Confidence 666666666778999999999999999965544 44566 7999999999985
No 45
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=2.5e-25 Score=232.37 Aligned_cols=376 Identities=16% Similarity=0.089 Sum_probs=245.8
Q ss_pred cccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHH
Q 008210 7 GSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSL 84 (574)
Q Consensus 7 ~~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~ 84 (574)
..+++|..+..+++..+..+. .+.++.+.|.+.+++|.+..+.+++.+...++..+ .++.|++.||+|||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 90 (398)
T TIGR00895 11 LSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSIL 90 (398)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHH
Confidence 345667777766666665554 55677888999999999999999977776677655 9999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHH
Q 008210 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNM 163 (574)
Q Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~ 163 (574)
+..++++++... ++++.+++.|++.|++.+..++....++.+++| ++|++++++...+..+|..+++.+...
T Consensus 91 ~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 163 (398)
T TIGR00895 91 LFSVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGW 163 (398)
T ss_pred HHHHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHH
Confidence 888876553322 357888999999999999999999999999998 589999999999999999999988888
Q ss_pred hccCChhHHHHHHHH-HHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhH
Q 008210 164 LLHNSSSKLLLVLAV-GVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYAS 242 (574)
Q Consensus 164 l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (574)
+.+..+|++.+.+.. ...+...+...++++.++...+++++... ...
T Consensus 164 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------------------- 211 (398)
T TIGR00895 164 LIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVR----RIV---------------------------- 211 (398)
T ss_pred HhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHH----HHH----------------------------
Confidence 776666666555543 33333333333333222110000000000 000
Q ss_pred HHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 008210 243 LFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLL 322 (574)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (574)
+ +. .++.. ++.++. . ++ ++.
T Consensus 212 ----------------~-~~---~~~~~-------------------~~~~~~----~---------~~-~~~------- 231 (398)
T TIGR00895 212 ----------------N-AI---APQMQ-------------------AEAQSA----L---------PE-QKA------- 231 (398)
T ss_pred ----------------H-HH---HHhcc-------------------cccccc----c---------cc-ccc-------
Confidence 0 00 00000 000000 0 00 000
Q ss_pred hhhccchhhhccCCCCCCCccHHH-hh---hchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHH
Q 008210 323 AEGEGAVRRKKRRPKRGEDFKFTE-AV---VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFC 396 (574)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~-~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~ 396 (574)
+ + . .....++ .+ +.+..+..+...++..........+.|.+.++.|.+ +.+...+...++
T Consensus 232 ---------~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 297 (398)
T TIGR00895 232 ---------T---Q-G-TKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFG 297 (398)
T ss_pred ---------c---c-c-hhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 0 0 0 0001111 11 122334444444333333333445667666777774 456777888999
Q ss_pred HhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH-hcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccch
Q 008210 397 NFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA-SSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHF 475 (574)
Q Consensus 397 ~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~ 475 (574)
..+++++.|++.||+++| .......+.......+.. ..+....++..++.|++.+...+....++.|.+|++++
T Consensus 298 ~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 372 (398)
T TIGR00895 298 GVIGSIIFGWLADRLGPR-----VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIR 372 (398)
T ss_pred HHHHHHHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHH
Confidence 999999999999999887 333333333333333332 23344566677888999998889899999999999999
Q ss_pred hhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 476 GLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 476 g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
|++.|+.+....++.. +||.+.|++
T Consensus 373 g~~~g~~~~~~~~g~~-~g~~~~G~l 397 (398)
T TIGR00895 373 ATGVGWAIGIGRLGAI-IGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhHHhc
Confidence 9999999999999998 899998875
No 46
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.94 E-value=1.1e-25 Score=233.40 Aligned_cols=354 Identities=15% Similarity=0.169 Sum_probs=234.6
Q ss_pred ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008210 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (574)
Q Consensus 27 ~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 105 (574)
....++...|.+++++|++..+.+++.+...++..+ .++.|+++||+|||+++.++.++..++.+++.+. ++
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TS 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hh
Confidence 355677778999999999999999987777777765 9999999999999999999999998887664433 36
Q ss_pred HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHH-HHHHhccCChhHHHHHHHHHHHHH
Q 008210 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTE-IYNMLLHNSSSKLLLVLAVGVPAV 183 (574)
Q Consensus 106 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~-i~~~l~~~~~~~~~~~~~~~~~~~ 183 (574)
++.+++.|++.|++.+..++....++.+++| ++|+++.++...+..+|..++++ +...+....+|++.+.+.....++
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAII 162 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 8899999999999999998989999999998 58999999999999999999885 444444444565554433322222
Q ss_pred H-HHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchh
Q 008210 184 C-LVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTI 262 (574)
Q Consensus 184 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (574)
. ++..++.++.+++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 180 (379)
T TIGR00881 163 VSLICFLLLRDSPQSCGL-------------------------------------------------------------- 180 (379)
T ss_pred HHHHHheeeCCCcccccc--------------------------------------------------------------
Confidence 2 2222222111100000
Q ss_pred cccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCc
Q 008210 263 CRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDF 342 (574)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (574)
++.++ .+++ + .+ ++. ++. ++ +....+.
T Consensus 181 ---~~~~~---------------------~~~~----~---------~~-~~~-----------~~~--~~--~~~~~~~ 207 (379)
T TIGR00881 181 ---PPAEE---------------------MPNE----E---------PD-GDA-----------EKK--EE--ELTKKQI 207 (379)
T ss_pred ---Ccccc---------------------Cccc----c---------cc-ccc-----------ccc--cc--cccchHH
Confidence 00000 0000 0 00 000 000 00 0011112
Q ss_pred cHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCch
Q 008210 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRT 419 (574)
Q Consensus 343 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~ 419 (574)
..++.+|+|.+|...+..++.......+..+.|.+.++ .|.+ +.+...+...++..+++++.|++.||..+|+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~-- 285 (379)
T TIGR00881 208 FLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG-- 285 (379)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch--
Confidence 34667889999988777766655555556677777765 5774 456778888999999999999999987544211
Q ss_pred hhHHHHHHHHHHHHHHHHhc---CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHh
Q 008210 420 IWMTCTQVIMIITYLLFASS---IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGL 496 (574)
Q Consensus 420 ~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 496 (574)
...........+++...... +.....+...+.|++..+..+....+..|.+|++++|++.|+.++...+++. ++|.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~~~ 364 (379)
T TIGR00881 286 PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGI-LAGL 364 (379)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhh-hhhh
Confidence 11222222222222222221 1223334445556555555555667889999999999999999999999998 8999
Q ss_pred HHHhhhhhh
Q 008210 497 LAGYIYDNE 505 (574)
Q Consensus 497 l~g~l~~~~ 505 (574)
+.|.+.|+.
T Consensus 365 ~~g~l~~~~ 373 (379)
T TIGR00881 365 PLGYLADGF 373 (379)
T ss_pred hHHHHHHhh
Confidence 999999984
No 47
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=8.8e-25 Score=225.45 Aligned_cols=336 Identities=13% Similarity=0.041 Sum_probs=239.2
Q ss_pred cchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHH
Q 008210 33 LYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWI 111 (574)
Q Consensus 33 ~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 111 (574)
...|.+.++++.+..+++++.+...++..+ +++.|+++||+|||+++.++.++..++.+++... ....+.+++.+++
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 97 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV--ALLGGLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH--HHcCCCcHHHHHH
Confidence 344557778899999999987777777655 9999999999999999999988887776554433 1111126889999
Q ss_pred HHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHh
Q 008210 112 ALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYF 190 (574)
Q Consensus 112 ~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (574)
.|++.|++.+...++...++.+++| ++|+++.++...+.++|..+++.+...+.+..+|++.+.+..+..++..+..+.
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998888999999998 589999999999999999999988887766556666655444333332222211
Q ss_pred cccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCccc
Q 008210 191 VRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSES 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (574)
.+..+ +++.
T Consensus 178 ~~~~~-----------------------------------------------------------------------~~~~ 186 (365)
T TIGR00900 178 VRIPE-----------------------------------------------------------------------LAAS 186 (365)
T ss_pred ccccc-----------------------------------------------------------------------CCCc
Confidence 11000 0000
Q ss_pred ccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhc
Q 008210 271 GILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVK 350 (574)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (574)
++++ .+++. .+ +....+++.+|+
T Consensus 187 ---------------------~~~~-----------------~~~~~--------------~~-----~~~~~~~~~~~~ 209 (365)
T TIGR00900 187 ---------------------EIQA-----------------LSNAV--------------LR-----DTREGIKFVLKN 209 (365)
T ss_pred ---------------------cccc-----------------cchhH--------------HH-----HHHhHHHHHHcC
Confidence 0000 00000 00 001124567788
Q ss_pred hhHHHHHHHHHhhcccceeee-ccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHH
Q 008210 351 ADFWLLFLVYFAGVGSGVTVL-NNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQ 426 (574)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~ 426 (574)
|.++......++......... ...|.+.++ +|.+ +.+...+...++..+++++.+++.||++|| ..+..+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~ 284 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAI 284 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHH
Confidence 888877666555444443333 556777765 5764 456777788899999999999999999888 4555555
Q ss_pred HHHHHHHHHHHhcC--chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 427 VIMIITYLLFASSI--DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 427 ~~~~i~~~~~~~~~--~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
....+++......+ ....++..++.|++.+...+....++.|..|++++|++.|+.++...++.. ++|.+.|.+.|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~g~~~~g~l~~~ 363 (365)
T TIGR00900 285 FVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP-LGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 55555555544333 335566777888988888888889999999999999999999999999998 899999999987
No 48
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=3e-24 Score=225.66 Aligned_cols=379 Identities=13% Similarity=0.089 Sum_probs=242.8
Q ss_pred CccccccccCcHHHHHHHHH-HHHhhhc-cchhhcchHHHHhhhCCCHHHH-----HHHHHHHHhhhh-ccccchhcccc
Q 008210 1 MVTLKAGSRPPWVGLGAAVW-VQIAAGN-AYNFPLYSHSLKSVLGFNQHQL-----TMLGVANDIGEN-VGLLPGLASNK 72 (574)
Q Consensus 1 ~~~~~~~~~~~w~~~~~~~l-~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~-----~~i~~~~~~~~~-~~~~~G~l~dr 72 (574)
|++-....+.+|..-....+ ..++.+. ...+..+.|.+.+++|.+..+. +++.+...++.. .+++.|+++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr 80 (408)
T PRK09874 1 MSPCENDTPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR 80 (408)
T ss_pred CCCCcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444444555555332222 2233333 3455667788888999886653 555555555554 59999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhh
Q 008210 73 FPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGG 151 (574)
Q Consensus 73 ~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~ 151 (574)
+|||+++.++.++..++++++... ++++.+++.|++.|++.+. .+.....+.+++| ++|+++.++...+..
T Consensus 81 ~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (408)
T PRK09874 81 KGRKIMLLRSALGMGIVMVLMGLA-------QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGV 152 (408)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHH-------hhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHH
Confidence 999999999988888886553322 3688899999999998664 4666667888887 689999999999999
Q ss_pred hHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhccc
Q 008210 152 LSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHM 231 (574)
Q Consensus 152 ~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (574)
+|..+++.+.+.+.+...|++.+.+..+..++..+..++.
T Consensus 153 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------- 192 (408)
T PRK09874 153 SGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFC---------------------------------------- 192 (408)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH----------------------------------------
Confidence 9998888888876554455554443332222211111100
Q ss_pred CCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008210 232 IPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRD 311 (574)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (574)
. +++ .++ .
T Consensus 193 ------------------------~---------~~~------------------------~~~----~----------- 200 (408)
T PRK09874 193 ------------------------I---------REN------------------------FQP----V----------- 200 (408)
T ss_pred ------------------------h---------ccC------------------------ccc----c-----------
Confidence 0 000 000 0
Q ss_pred CCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHH-HHhhcccceeeeccHHHHHHhhCC--ch---
Q 008210 312 NDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLV-YFAGVGSGVTVLNNLAQIGIAQGV--HD--- 385 (574)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~--~~--- 385 (574)
+++++ . +..+..+.++++.++..... .+...........+.+.+.++.+. ++
T Consensus 201 -~~~~~--------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (408)
T PRK09874 201 -SKKEM--------------L-------HMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAF 258 (408)
T ss_pred -cchhh--------------h-------HHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 00000 0 00011334555555442222 222111112223445556655432 22
Q ss_pred -hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHH
Q 008210 386 -TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMI 463 (574)
Q Consensus 386 -~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~ 463 (574)
.+...+...++..++++..|++.||++|| ..+..+.....++.+..... +...+++..++.|++.+...+...
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQ 333 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHH
Confidence 23445566778889999999999999988 44555555555555544433 334555667788998888888888
Q ss_pred HHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHH
Q 008210 464 PTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGS 543 (574)
Q Consensus 464 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
..+.+..|++++|+.+|+.+....++.. +||.+.|.+.|.. +|+..|++.+++.+++.
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~-~gp~~~G~l~~~~---------------------g~~~~f~~~~~~~l~~~ 391 (408)
T PRK09874 334 TLLVYNSSNQIAGRIFSYNQSFRDIGNV-TGPLMGAAISANY---------------------GFRAVFLVTAGVVLFNA 391 (408)
T ss_pred HHHHHhCCcccceeeehHHHHHHHHHHH-hhHHHHHHHHhhc---------------------chhHHHHHHHHHHHHHH
Confidence 8888999999999999999999999998 8999999998873 58999998888877776
Q ss_pred HHHHH
Q 008210 544 ILSII 548 (574)
Q Consensus 544 ~~~~~ 548 (574)
+....
T Consensus 392 ~~~~~ 396 (408)
T PRK09874 392 VYSWN 396 (408)
T ss_pred HHHHH
Confidence 65543
No 49
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=1.8e-24 Score=228.20 Aligned_cols=361 Identities=10% Similarity=-0.015 Sum_probs=240.6
Q ss_pred hhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 31 FPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 31 ~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
.....|.+.++++.+..+.+++.+...++..+ +++.|++.||+|||+++.++.++.++++.++... ....+++++.+
T Consensus 36 ~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 113 (417)
T PRK10489 36 LGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN--AFLPEPSLLAI 113 (417)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH--HHcCCCcHHHH
Confidence 34456777788888999999987777777765 9999999999999999998888877775543221 12223467888
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMM 188 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (574)
++.|++.|++.+...++....+.+++| ++|+++.++.....++|..+++.+.+.+....+|++.+.+..+..++..+..
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 889999999998887778888999998 5799999999999999999998888877554445554443332222221111
Q ss_pred HhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCc
Q 008210 189 YFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTS 268 (574)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (574)
+.+++. ++
T Consensus 194 ~~l~~~------------------------------------------------------------------------~~ 201 (417)
T PRK10489 194 LRLPAL------------------------------------------------------------------------PP 201 (417)
T ss_pred HhCCCC------------------------------------------------------------------------CC
Confidence 111000 00
Q ss_pred ccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhh
Q 008210 269 ESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAV 348 (574)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (574)
++++ + +++ .+.....++..+
T Consensus 202 -----------------------~~~~---------------~-~~~---------------------~~~~~~~~~~~~ 221 (417)
T PRK10489 202 -----------------------PPQP---------------R-EHP---------------------LRSLLAGFRFLL 221 (417)
T ss_pred -----------------------CCcc---------------c-ccc---------------------hHHHHHHHHHHH
Confidence 0000 0 000 000001234466
Q ss_pred hchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHH
Q 008210 349 VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCT 425 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~ 425 (574)
++|.++...+..++... ......+.|.+.++ +|.+ ..++..+...++..++.++.+++.||.+++ ..+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~ 295 (417)
T PRK10489 222 ASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLS 295 (417)
T ss_pred cChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHH
Confidence 77776655444333221 12334567778777 6774 456777788899999999999999985544 345555
Q ss_pred HHHHHHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 426 QVIMIITYLLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 426 ~~~~~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
.++..++++++...+. ...++...+.|++.+...+....++.|..|++.+|++.|+.+....++.. +||.+.|.+.|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~-~g~~l~G~l~~~ 374 (417)
T PRK10489 296 TLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDA-IGAALLGGLGAM 374 (417)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHh-HHHHHHHHHHHH
Confidence 5566666655543333 34455666777777666666678899999999999999999999999998 899999999998
Q ss_pred hhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 008210 505 EAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (574)
. ++...++..+++.++..++.....++.
T Consensus 375 ~---------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 375 M---------------------TPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred h---------------------chhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 4 356667666655555444443333433
No 50
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1e-23 Score=220.83 Aligned_cols=353 Identities=15% Similarity=0.135 Sum_probs=230.6
Q ss_pred Ccccccccc-CcHHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHH
Q 008210 1 MVTLKAGSR-PPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLV 78 (574)
Q Consensus 1 ~~~~~~~~~-~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~ 78 (574)
|.++++-.+ .+++.+...++..... ...++.+.+++++++|++..+++++.....+.. ..+++.|+++||+|||++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~ 78 (400)
T PRK11646 1 MSRVSQARNLGKYFLLIDNMLVVLGF--FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM 78 (400)
T ss_pred CCCCcccccccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH
Confidence 445554332 3355565555555433 334566666788999999999999655555554 459999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHH
Q 008210 79 LFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVF 157 (574)
Q Consensus 79 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~ 157 (574)
+..+.++..++++++... +++|.+++.|++.|++.+...++....+.+++| ++|++++|+......+|..++
T Consensus 79 l~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig 151 (400)
T PRK11646 79 IVTGMLMRAAGFATMAIA-------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIG 151 (400)
T ss_pred HHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887664322 367889999999999998887888888999997 689999999999999999999
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchh
Q 008210 158 TEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSAS 237 (574)
Q Consensus 158 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (574)
|.+.+.+. ..+|++.+.+.....++..+...+.
T Consensus 152 ~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~---------------------------------------------- 184 (400)
T PRK11646 152 ALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWL---------------------------------------------- 184 (400)
T ss_pred HHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHh----------------------------------------------
Confidence 98888776 4455555544332222211111000
Q ss_pred hhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchH
Q 008210 238 ISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSE 317 (574)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (574)
.+ ++ .+++ ++
T Consensus 185 ------------------~~---------~~-----------------------~~~~-----------------~~--- 194 (400)
T PRK11646 185 ------------------LP---------AY-----------------------KLST-----------------VR--- 194 (400)
T ss_pred ------------------CC---------cc-----------------------cccc-----------------cc---
Confidence 00 00 0000 00
Q ss_pred HHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHH
Q 008210 318 VALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSF 395 (574)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i 395 (574)
+ + ....+++.+++|.++......+...........+.|.+.++.+.+ +.++..+...+
T Consensus 195 ---------------~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~ 254 (400)
T PRK11646 195 ---------------T--P---VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEAC 254 (400)
T ss_pred ---------------h--h---hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHH
Confidence 0 0 001235667788777654443332222222334567777775443 34455555555
Q ss_pred HHhhhhhhhhhhhh-hhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCcc
Q 008210 396 CNFVGRLGGGVVSE-HFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLE 473 (574)
Q Consensus 396 ~~~ig~~~~G~l~D-r~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~ 473 (574)
....+....++..| |++.+ ..+..+.++..++..++...+ .....+...+.+++.+...+....++.+..|++
T Consensus 255 ~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~ 329 (400)
T PRK11646 255 LSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADAR 329 (400)
T ss_pred HHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcc
Confidence 55544444455555 44433 234445555666665554333 233444556677777777778888999999999
Q ss_pred chhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 474 HFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 474 ~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
++|+++|+.+....++.. +||.+.|++.|+.
T Consensus 330 ~~g~~~g~~~~~~~~g~~-ig~~l~G~l~~~~ 360 (400)
T PRK11646 330 ARGSYMGFSRLGLALGGA-IGYIGGGWLFDLG 360 (400)
T ss_pred cchhhhhHHHHHHHHHHH-hcccchHHHHHHH
Confidence 999999999999999998 9999999999985
No 51
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=3.1e-24 Score=221.38 Aligned_cols=328 Identities=15% Similarity=0.088 Sum_probs=228.5
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
...++.+.|.+++++|++.++.+++.+...++..+ +++.|++.||+|+|+++.++.++..++.+.. .. +++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~------~~--~~~ 87 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR------SA--PGT 87 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH------Hh--ccH
Confidence 34577889999999999999999987777777765 9999999999999999999988877775432 11 356
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCC--hhHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNS--SSKLLLVLAVGVPAVC 184 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~--~~~~~~~~~~~~~~~~ 184 (574)
+.+++.|++.|+|.+...+.....+.+++|++|++++++...+..+|..+++.+...+.+.. .|++.+.......++.
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 78888999999999988777778889999999999999999999899888887776654321 2444333221111110
Q ss_pred HHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcc
Q 008210 185 LVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICR 264 (574)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (574)
.. . ..+..
T Consensus 168 ~~--~-----------------------------------------------------------------~~~~~----- 175 (355)
T TIGR00896 168 LL--A-----------------------------------------------------------------WIPQV----- 175 (355)
T ss_pred HH--H-----------------------------------------------------------------Hhhhh-----
Confidence 00 0 00000
Q ss_pred cCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccH
Q 008210 265 KRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKF 344 (574)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (574)
+++ + ++ ++ + . .....
T Consensus 176 -~~~-----------------------~-~~-----------------~~-----------------~---~---~~~~~ 190 (355)
T TIGR00896 176 -RRR-----------------------V-AA-----------------NQ-----------------T---T---TRLTP 190 (355)
T ss_pred -ccc-----------------------c-CC-----------------CC-----------------C---C---CCCCC
Confidence 000 0 00 00 0 0 00112
Q ss_pred HHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 345 TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
++.+|+|.+|...+..++..........+.|.+.++.|.+ +.+...+...++.++++++.|++.||+++|+ ..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~ 266 (355)
T TIGR00896 191 VRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQR----GIV 266 (355)
T ss_pred chhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHH
Confidence 4567888888766655554444445566788888888774 4667888899999999999999999995441 344
Q ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcC-ccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 423 TCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFG-LEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
..+.++..++..++.............+.|++.|..++.....+.+..+ +++++...|+.+....++.. ++|.+.|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~gp~~~G~l 345 (355)
T TIGR00896 267 AVLAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAA-LGPLFVGVL 345 (355)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 4455555555554443222222234667899998888877666665554 56789999999988889888 899999999
Q ss_pred hhhh
Q 008210 502 YDNE 505 (574)
Q Consensus 502 ~~~~ 505 (574)
.|+.
T Consensus 346 ~~~~ 349 (355)
T TIGR00896 346 HDIS 349 (355)
T ss_pred HHHh
Confidence 9986
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=1.6e-23 Score=219.70 Aligned_cols=356 Identities=12% Similarity=0.055 Sum_probs=233.5
Q ss_pred hhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008210 24 AAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (574)
Q Consensus 24 ~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 101 (574)
..|. ....+.+.|.+++++|.+..+.+++.+...++..+ +++.|++.||+|||+++.++.++++++++++..+ ..
T Consensus 14 ~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~--~~- 90 (410)
T TIGR00885 14 LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA--AE- 90 (410)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--Hh-
Confidence 3454 33445778999999999999999987777777765 9999999999999999999999999997663222 11
Q ss_pred CChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCC--h-hHHHHHHH
Q 008210 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNS--S-SKLLLVLA 177 (574)
Q Consensus 102 ~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~--~-~~~~~~~~ 177 (574)
.++++.+++.|++.|+|.|...+....++.++.| ++|++.+++....+++|..+++.+...+.... . ......
T Consensus 91 -~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~-- 167 (410)
T TIGR00885 91 -IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLD-- 167 (410)
T ss_pred -hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhh--
Confidence 1368889999999999999999888888888888 57999999999999999999988877663211 0 000000
Q ss_pred HHHHHHHHHHHHhcccCCCCCC---CCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhh
Q 008210 178 VGVPAVCLVMMYFVRPCTPASG---EDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPL 254 (574)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (574)
...+..++ ..+..+|++.+.....+.+... ..+
T Consensus 168 --------------~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~------------------------------~~~ 203 (410)
T TIGR00885 168 --------------KLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA------------------------------LLI 203 (410)
T ss_pred --------------hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------HHH
Confidence 00000000 0000112222211111000000 000
Q ss_pred cccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhcc
Q 008210 255 AIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKR 334 (574)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (574)
... +.++. ++ + ++ ++
T Consensus 204 -~~~-------~~p~~-----------------------~~----~------------~~-----------------~~- 218 (410)
T TIGR00885 204 -MLT-------KMPAL-----------------------NH----S------------DA-----------------KQ- 218 (410)
T ss_pred -HHh-------cCCCC-----------------------Cc----c------------cc-----------------cc-
Confidence 000 00000 00 0 00 00
Q ss_pred CCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCC--c--hhhHHHHHHHHHHhhhhhhhhhhhhh
Q 008210 335 RPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGV--H--DTTILLSLFSFCNFVGRLGGGVVSEH 410 (574)
Q Consensus 335 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~--~~~~~~~~~~i~~~ig~~~~G~l~Dr 410 (574)
+ ....+.++.+|+|.++...+..++..+.......+++.+.++.+. + .+....+.+.....+||++++++.||
T Consensus 219 -~--~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r 295 (410)
T TIGR00885 219 -I--SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY 295 (410)
T ss_pred -c--cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000123467788888887777777766666666778888776532 2 22445666778889999999999999
Q ss_pred hhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHH
Q 008210 411 FVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAA 490 (574)
Q Consensus 411 ~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~ 490 (574)
+++| ..+.++.+...+..++....+.........+.|++.+..||.......+..+++....+.++.+.. +|+
T Consensus 296 ~~~~-----~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gg 368 (410)
T TIGR00885 296 LAAH-----KVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGG 368 (410)
T ss_pred cCHH-----HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hcc
Confidence 9888 455555566666555555444444456777888889999999999999999877655566655543 888
Q ss_pred HHHhHhHHHhhhhhh
Q 008210 491 FLFSGLLAGYIYDNE 505 (574)
Q Consensus 491 ~~~gp~l~g~l~~~~ 505 (574)
. +.|++.|++.|..
T Consensus 369 a-~~p~l~G~~~d~~ 382 (410)
T TIGR00885 369 G-IVPPLQGFIIDMK 382 (410)
T ss_pred c-hHHHHHHHHHHHh
Confidence 7 8999999999964
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.93 E-value=1.4e-23 Score=218.64 Aligned_cols=329 Identities=16% Similarity=0.086 Sum_probs=223.7
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
...+....|.+++++|.+..+.+++.+...++..+ +++.|++.||+|||+++.++.++..++.+++... +++
T Consensus 21 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 93 (385)
T TIGR00710 21 IDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-------NNI 93 (385)
T ss_pred HHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------ccH
Confidence 33445567889999999999999987777777765 9999999999999999999999988886664332 367
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|++.|++.+...+....++.+++| ++|+++.++......+|..+++.+...+.+..+|++.+.......++..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLS 173 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 889999999999999998889999999998 5799999999999999999998888877655556655443332222211
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
+..++.. +
T Consensus 174 ~~~~~~~----------------------------------------------------------------~-------- 181 (385)
T TIGR00710 174 ALIFFIL----------------------------------------------------------------P-------- 181 (385)
T ss_pred HHHHHhC----------------------------------------------------------------C--------
Confidence 1111100 0
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+++ +++. ++.+ + .....++
T Consensus 182 -~~~----------------------~~~~-----------------~~~~---------------~------~~~~~~~ 200 (385)
T TIGR00710 182 -ETL----------------------PYEA-----------------RIQI---------------S------TYFETFL 200 (385)
T ss_pred -CCC----------------------CCcc-----------------cCCH---------------H------HHHHHHH
Confidence 000 0000 0000 0 0011235
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHH-hhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
+.+|++.+|...+..............+.|.+.+ ..|.+ +.+...+...++..+++++.|++.||+++| ..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~ 275 (385)
T TIGR00710 201 LLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLL 275 (385)
T ss_pred HHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHH
Confidence 6678888877666554443333334445566665 46774 456677788899999999999999999988 334
Q ss_pred HHHHHHHHHHHHHHHh----c-Cch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHh
Q 008210 423 TCTQVIMIITYLLFAS----S-IDG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGL 496 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~~----~-~~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 496 (574)
..+.....++..++.. . +.. ..+....+.|++.+...+.......|.+| +++|++.++.+.....++.+.+|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~- 353 (385)
T TIGR00710 276 RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY- 353 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH-
Confidence 4444444444433321 1 112 33445566788888888888888888886 67899999998887776663555
Q ss_pred HHHhhhh
Q 008210 497 LAGYIYD 503 (574)
Q Consensus 497 l~g~l~~ 503 (574)
+.+.+.+
T Consensus 354 ~~~~~~~ 360 (385)
T TIGR00710 354 LVSLIHG 360 (385)
T ss_pred HHHhccc
Confidence 5664433
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=99.93 E-value=3.5e-23 Score=218.97 Aligned_cols=343 Identities=16% Similarity=0.174 Sum_probs=225.9
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
....+.+.|.+++++|.+..+.+++.+.+.+++.+ +++.|++.||+|||+++.++.+++.++++++.. ...+ +++
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~--~~~a--~~~ 117 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWP--AAEI--MNY 117 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--HHhc--CCH
Confidence 45566778999999999999999977777777765 999999999999999999999999999766321 1222 468
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccCC-----------------
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNS----------------- 168 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~----------------- 168 (574)
+.+++.|+++|+|.|...+.....+.++.|+ +|+..+++.+..+++|..+++.++..+....
T Consensus 118 ~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~ 197 (438)
T PRK10133 118 TLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQL 197 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhH
Confidence 8999999999999999998888888888775 4556799999999999988887766442100
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHH
Q 008210 169 -SSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMI 247 (574)
Q Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
.|+..+.. +|++.+.....+.
T Consensus 198 ~~w~~~~~~----------------------------~w~~~f~~~~~v~------------------------------ 219 (438)
T PRK10133 198 SAYKHSLVL----------------------------SVQTPYMIIVAIV------------------------------ 219 (438)
T ss_pred HHHHHHHHH----------------------------HHHHHHHHHHHHH------------------------------
Confidence 11111110 0111110000000
Q ss_pred HHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhcc
Q 008210 248 ILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEG 327 (574)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (574)
..+..+....+ .|+++ ++++ ++
T Consensus 220 -~~~~~~~~~~~------~p~~~---------------------~~~~-----------------~~------------- 241 (438)
T PRK10133 220 -LLVALLIMLTK------FPALQ---------------------SDNH-----------------SD------------- 241 (438)
T ss_pred -HHHHHHHHHhc------CCCCC---------------------cccc-----------------cc-------------
Confidence 00000000000 00000 0000 00
Q ss_pred chhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHH-Hh-hCCc--hhhHHHHHHHHHHhhhhhh
Q 008210 328 AVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIG-IA-QGVH--DTTILLSLFSFCNFVGRLG 403 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~--~~~~~~~~~~i~~~ig~~~ 403 (574)
++ +.....+.++.+++|.++...+..++..........+.+.+. ++ .|++ +.+.....+.++..+|++.
T Consensus 242 ----~~---~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~ 314 (438)
T PRK10133 242 ----AK---QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFT 314 (438)
T ss_pred ----cc---ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000011235678889888766655555444444445666664 43 5775 4677888999999999999
Q ss_pred hhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhh
Q 008210 404 GGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLA 483 (574)
Q Consensus 404 ~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~ 483 (574)
+|++.||+++| .++..+.++..+++++.........+....+.|++.+..+|.......+.+|+ +.+.+.++..
T Consensus 315 ~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~ 388 (438)
T PRK10133 315 GTWLISRFAPH-----KVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV 388 (438)
T ss_pred HHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh
Confidence 99999999998 44555544444444443332222334567788999999999999999999874 5788888876
Q ss_pred hhhhhHHHHHhHhHHHhhhhhh
Q 008210 484 LGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 484 ~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
+ ..+++. ++|.+.|.+.|..
T Consensus 389 ~-~~~g~~-~~~~i~G~l~~~~ 408 (438)
T PRK10133 389 M-TIIGGG-IVTPVMGFVSDAA 408 (438)
T ss_pred H-Hhccch-HHHHHHHHHHHhc
Confidence 4 446676 7888999998874
No 55
>PRK11043 putative transporter; Provisional
Probab=99.93 E-value=6.8e-23 Score=215.01 Aligned_cols=345 Identities=12% Similarity=0.072 Sum_probs=226.8
Q ss_pred HHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHH
Q 008210 12 WVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGY 90 (574)
Q Consensus 12 w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~ 90 (574)
+..+..+++..+.......+....|++++++|.+.++.+++.+...++..+ +++.|+++||+|||+++.++.++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 344444444444333444555566788999999999999977777777655 9999999999999999999998888886
Q ss_pred HHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccCCh
Q 008210 91 GVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSS 169 (574)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~ 169 (574)
+++... ++++.+++.|++.|+|.+...+.....+.+++|+ +++++.+......++|..++|.+...+.+..+
T Consensus 86 ~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 86 LGMLWV-------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred HHHHHh-------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 554322 3688899999999999888777777788999985 67888888888888888888888887766556
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHH
Q 008210 170 SKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIIL 249 (574)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (574)
|++.+.......++..+..++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------------- 181 (401)
T PRK11043 159 WQAIFATLFAITLLLILPTLRLK--------------------------------------------------------- 181 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcC---------------------------------------------------------
Confidence 66655433322222111111110
Q ss_pred HhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccch
Q 008210 250 LMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAV 329 (574)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (574)
++ ++++ +++
T Consensus 182 -----------------~~-----------------------~~~~-----------------~~~-------------- 190 (401)
T PRK11043 182 -----------------PS-----------------------KKAR-----------------KQS-------------- 190 (401)
T ss_pred -----------------CC-----------------------CCcc-----------------ccc--------------
Confidence 00 0000 000
Q ss_pred hhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhh
Q 008210 330 RRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVV 407 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l 407 (574)
+ +..++++.+|++.+|...+...+.......+..+.|.+.++.|++ +.+.......++..+|++..+++
T Consensus 191 ------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l 261 (401)
T PRK11043 191 ------Q---DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAA 261 (401)
T ss_pred ------h---HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011345677888877655544443333334445677777777775 34555566677888999999999
Q ss_pred hhhhhccccCchhhHHHHHHHHHHHHHHHHh--c-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhh
Q 008210 408 SEHFVRKTIPRTIWMTCTQVIMIITYLLFAS--S-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLAL 484 (574)
Q Consensus 408 ~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 484 (574)
.||+++|+.. ........+..+.+.+... . +.....+...+.|++.+..++.......+..| +++|.+.|+.++
T Consensus 262 ~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~ 338 (401)
T PRK11043 262 LQKWGGEQLL--PWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNT 338 (401)
T ss_pred HHHcCHHHHH--HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHH
Confidence 9999888321 1111122222222222222 1 22233445566777788878877777777775 679999999999
Q ss_pred hhhhHHHHHhHhHHHhhhhh
Q 008210 485 GNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 485 ~~~lg~~~~gp~l~g~l~~~ 504 (574)
....++. .++.+.|.+.|.
T Consensus 339 ~~~~~~~-~~~~~~g~l~~~ 357 (401)
T PRK11043 339 LQLGLCF-LASLLVSALIST 357 (401)
T ss_pred HHHHHHH-HHHHHHHHccCC
Confidence 8888887 788899988775
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=5.5e-23 Score=213.36 Aligned_cols=343 Identities=13% Similarity=0.106 Sum_probs=220.4
Q ss_pred hcchHHHHhhhCCCHHHHHHHHHHHHhh-hhccccchhccccCCChHHHHH-HHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 32 PLYSHSLKSVLGFNQHQLTMLGVANDIG-ENVGLLPGLASNKFPPWLVLFI-GSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 32 ~~~~~~l~~~l~~s~~~~~~i~~~~~~~-~~~~~~~G~l~dr~G~r~~~~~-g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
+.+.+.+++++|.+..+++++.+...+. .+.+++.|.++||+|||+.+.+ +.+...++.+++. .+ ++++.+
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~-----~~--~~~~~l 90 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA-----WN--RNYFLL 90 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH-----hc--chHHHH
Confidence 3344457889999999999976655554 4569999999999999887655 4444444433322 22 367888
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchH--HHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTV--AGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLV 186 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a--~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (574)
++.|++.|.+.+...+.......++.|+ +|+.+ .++...+.++|.++++++...+.+..+|++.+.+..++.++..+
T Consensus 91 ~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~ 170 (375)
T TIGR00899 91 LVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGV 170 (375)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 8889988877777766666677777774 45543 57777788899999998888876666677766655444333322
Q ss_pred HHHh-cccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 187 MMYF-VRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 187 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
..++ +++.|
T Consensus 171 ~~~~~~~~~~---------------------------------------------------------------------- 180 (375)
T TIGR00899 171 LVWLFLPSYP---------------------------------------------------------------------- 180 (375)
T ss_pred HHHHhCCCcc----------------------------------------------------------------------
Confidence 2211 11000
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+ +++ ++ + + ..+.+
T Consensus 181 --~------------------------~~~-----------------~~-----------------~---~----~~~~~ 193 (375)
T TIGR00899 181 --R------------------------GAP-----------------GA-----------------L---T----RLEVR 193 (375)
T ss_pred --c------------------------Ccc-----------------cc-----------------c---C----cchhh
Confidence 0 000 00 0 0 00112
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHH-hhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
+.++++.++......++..........+.|.+.+ +.|.+ +.+...+...+...++++..|++.||++|| ..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~ 268 (375)
T TIGR00899 194 GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLM 268 (375)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHH
Confidence 2445555555444433332222223344566654 46774 345565666667788899999999999998 344
Q ss_pred HHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 423 TCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
..+.+...+.+...... +....++...+.|++.|...+....+..|..|+ +++.+.|+.+....++.. ++|.+.|.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~-~g~~~~g~~ 346 (375)
T TIGR00899 269 LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWI-IAGSVGGIL 346 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 44444444443333322 233445556677888887777777888898875 567999999999999998 899999999
Q ss_pred hhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 502 YDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
.|.. +|+..|++.+++.+++.++.
T Consensus 347 ~~~~---------------------g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 347 AERW---------------------SYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHhc---------------------cchhHHHHHHHHHHHHHHHH
Confidence 9873 58888888888777776554
No 57
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=3.3e-23 Score=212.20 Aligned_cols=327 Identities=24% Similarity=0.295 Sum_probs=253.8
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.+.+....|.+.+++|.+..+.+++.+...++..+ .++.|++.||+|||+.+.++.++..++.+.+... +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 87 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SSL 87 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------ccH
Confidence 55566777888899999999999977777677655 9999999999999999999999999887664432 367
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|++.|++.+...+....++.+++|+ +|+++.++.....++|..+++.+...+.+...|++.+.+..++.++..
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLA 167 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999985 899999999999999999999888877655445554443332222211
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
+...+.
T Consensus 168 ~~~~~~-------------------------------------------------------------------------- 173 (352)
T cd06174 168 LLLLFL-------------------------------------------------------------------------- 173 (352)
T ss_pred HHHHHH--------------------------------------------------------------------------
Confidence 111000
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+
T Consensus 174 ----------------------------------------------------------------------~--------- 174 (352)
T cd06174 174 ----------------------------------------------------------------------L--------- 174 (352)
T ss_pred ----------------------------------------------------------------------H---------
Confidence 0
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhh-CCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh-h
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ-GVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI-W 421 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~-~ 421 (574)
|.++...+..++..........+.+.+.++. +.+ +.+...+...++..+++++.+++.||++|| . .
T Consensus 175 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~ 244 (352)
T cd06174 175 -----RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLL 244 (352)
T ss_pred -----HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHH
Confidence 3445555554444444444555677777664 654 456778889999999999999999999999 5 6
Q ss_pred HHHHHHHHHHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHh
Q 008210 422 MTCTQVIMIITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGY 500 (574)
Q Consensus 422 ~~~~~~~~~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~ 500 (574)
+..+..+..++.......+ ....++...+.|++.+...+....++.|..|++++++.+|+.+....++.. ++|.+.|.
T Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~i~g~ 323 (352)
T cd06174 245 LLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGA-LGPLLAGL 323 (352)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 6667777777776665443 346667788889999999999999999999999999999999999999998 89999999
Q ss_pred hhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 501 IYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 501 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
+.|.. +|+..+++.+++.+++.+..
T Consensus 324 l~~~~---------------------~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 324 LLDTG---------------------GYGGVFLILAALALLAALLL 348 (352)
T ss_pred Hhccc---------------------CcchHHHHHHHHHHHHHHHh
Confidence 99862 58888998888877776554
No 58
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.6e-24 Score=223.76 Aligned_cols=368 Identities=18% Similarity=0.229 Sum_probs=255.7
Q ss_pred HhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHH
Q 008210 39 KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVAT 117 (574)
Q Consensus 39 ~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G 117 (574)
++++++|.+|-+++.+.+..|+++ +++.|.++||+|.|+++..+.++.+++++++=++. +.+++.+++.|+++|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa-----~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAA-----SIGFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-----HhcchhhHHHHHHhH
Confidence 447899999999987777888876 99999999999999999999999999988855442 234667788999999
Q ss_pred hhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC-ChhHHHHHHHHHHHHHHHHH-HHhcccC
Q 008210 118 NSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVM-MYFVRPC 194 (574)
Q Consensus 118 ~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 194 (574)
++.|..+++...+..+|.| ++|++..++..++..+|.++.-++.+.+.+. .+|+..+.+.....++-.+. .++..+.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999998 7999999999999999999999999888765 56666555444333332222 2222211
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCccccccc
Q 008210 195 TPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILD 274 (574)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (574)
|.++
T Consensus 220 P~~h---------------------------------------------------------------------------- 223 (466)
T KOG2532|consen 220 PSKH---------------------------------------------------------------------------- 223 (466)
T ss_pred cccC----------------------------------------------------------------------------
Confidence 1110
Q ss_pred CCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHH
Q 008210 275 QSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFW 354 (574)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 354 (574)
+.+ ..+|.+..++. .++. + .+.+.+.++++.++++.+|
T Consensus 224 --------------------~~i----------------s~~El~~I~~~-k~~~--~---~~~~~~vP~~~i~ts~~vw 261 (466)
T KOG2532|consen 224 --------------------PNI----------------SEKELKYIEKG-KSEA--H---VKKKPPVPYKAILTSPPVW 261 (466)
T ss_pred --------------------CCC----------------CHHHHHHHHhc-cccc--c---cCCCCCCCHHHHHcCHHHH
Confidence 000 00000000000 0000 0 1111356889999999999
Q ss_pred HHHHHHHhhcccceeeeccHHHHHHh-hCC--chhhHHHHHHHHHHhhhhhhhhhhhhhhhcccc----CchhhHHHHHH
Q 008210 355 LLFLVYFAGVGSGVTVLNNLAQIGIA-QGV--HDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTI----PRTIWMTCTQV 427 (574)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~--~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~----~~~~~~~~~~~ 427 (574)
..+++.++.......+..+.|.|+++ +++ .+.+++.++..+.+.+..+++|.++||+-+|.+ .|...-.++..
T Consensus 262 ai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~ 341 (466)
T KOG2532|consen 262 AIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFG 341 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHH
Confidence 99999999887778888899999987 566 578899999999999999999999999877411 12244445555
Q ss_pred HHHHHHHHHHhcCc--hHHHHHHHHHhhh-ccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 428 IMIITYLLFASSID--GTLYAATALLGIC-YGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 428 ~~~i~~~~~~~~~~--~~l~~~~~l~g~~-~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
..++.++.+.+.+. ....+.....+.+ .|...+....-..+. .+++.+..+|+.+....+.++ ++|.+.|.+...
T Consensus 342 ~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~-~~P~~vg~~~~~ 419 (466)
T KOG2532|consen 342 GPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGF-IAPLLVGIIVTD 419 (466)
T ss_pred HHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHH-HHHHheeeEeCC
Confidence 55665555554331 2111122222222 122222222222222 579999999999999999998 999999999852
Q ss_pred hhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 505 EAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
. +. ..|+..|++.+++.+++.++..++
T Consensus 420 ~-t~-----------------~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 420 N-TR-----------------EEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred C-CH-----------------HHHHHHHHHHHHHHHHhchheeEe
Confidence 1 11 249999999999888887554443
No 59
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=6e-23 Score=214.72 Aligned_cols=346 Identities=12% Similarity=0.014 Sum_probs=225.5
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
....+.+.+++++++|++..+++++.+...+.. ..+++.|+++||+|||+++.++.+...++++++.+. +++
T Consensus 24 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~ 96 (395)
T PRK10054 24 GATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-------NNV 96 (395)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-------hHH
Confidence 334455566788899999999999666555555 459999999999999999999998888876553322 357
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.+.+.|.+.+...+.......+.+| ++|+++.++......+|.+++|++...+.. .+|+..+....+..++..
T Consensus 97 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~ 175 (395)
T PRK10054 97 TLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPL 175 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHH
Confidence 778888888888777666667777888887 579999999999999999999888876643 234433332222211111
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
+...+. .+
T Consensus 176 i~~~~~----------------------------------------------------------------~~-------- 183 (395)
T PRK10054 176 VFIQIW----------------------------------------------------------------VQ-------- 183 (395)
T ss_pred HHHHHH----------------------------------------------------------------Hh--------
Confidence 111000 00
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+++ ++++ + ++ + + ..+.+
T Consensus 184 ~~~-----------------------~~~~---------------~-~~-----------------~---~----~~~~~ 200 (395)
T PRK10054 184 RSE-----------------------KAIA---------------T-ET-----------------G---S----VWSPS 200 (395)
T ss_pred ccc-----------------------cccc---------------c-ch-----------------h---h----hhhhh
Confidence 000 0000 0 00 0 0 01124
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh---hCCch--hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA---QGVHD--TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI 420 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~ 420 (574)
+.+|+|.+|......++..........+.+.+... .+.++ .+...+...+.....++..|++.||.++| .
T Consensus 201 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~ 275 (395)
T PRK10054 201 VLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----P 275 (395)
T ss_pred hhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----h
Confidence 56788888877666555433333333445555433 23322 34455556666666778888999998888 4
Q ss_pred hHHHHHHHHHHHHHHHHh-cCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH
Q 008210 421 WMTCTQVIMIITYLLFAS-SID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA 498 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~~-~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~ 498 (574)
.+..+..+..+++..+.. .++ +.+.+...+.|++.+...+.....+.+..|++.++..+|..+ ...+|.. +||.++
T Consensus 276 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~-~Gp~~~ 353 (395)
T PRK10054 276 LMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAA-INPLVS 353 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHH-HHHHHH
Confidence 555566666666655543 232 344556677788877777777788999999999999988755 5567887 899999
Q ss_pred HhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHH
Q 008210 499 GYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 499 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (574)
|.++|+. ++...|++.+.+..++.+
T Consensus 354 G~l~~~~---------------------g~~~~~~~~~~~~~~~~~ 378 (395)
T PRK10054 354 GVILTTL---------------------PPWSLFVILALAIVAAWL 378 (395)
T ss_pred HHHHHHc---------------------ChhhHHHHHHHHHHHHHH
Confidence 9999984 466677766655555443
No 60
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=8.2e-24 Score=217.20 Aligned_cols=328 Identities=21% Similarity=0.256 Sum_probs=223.7
Q ss_pred chhhcchH-HHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 29 YNFPLYSH-SLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 29 ~~~~~~~~-~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
..+....| .+.+++|.+..+++++.+...++.. .+++.|.++||+|||+++.++.++..++.++..++ + ++
T Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~--~~ 85 (352)
T PF07690_consen 13 SIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-----S--NF 85 (352)
T ss_dssp HHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-----C--CH
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-----h--hH
Confidence 33455566 7889999999999997776666665 59999999999999999999999999884443221 2 46
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
+.+++.|++.|++.+...+....++.+++|+ +|++++++...+.++|..+++.+...+.+..+|++.+.+.....++..
T Consensus 86 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (352)
T PF07690_consen 86 WLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAA 165 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhh
Confidence 7888999999999999999999999999985 899999999999999999999988887655566666555444433332
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
+......+.
T Consensus 166 il~~~~~~~----------------------------------------------------------------------- 174 (352)
T PF07690_consen 166 ILFILFLPE----------------------------------------------------------------------- 174 (352)
T ss_dssp HHHHCCC-------------------------------------------------------------------------
T ss_pred hhHhhhhhh-----------------------------------------------------------------------
Confidence 221111100
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCc-cH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDF-KF 344 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 344 (574)
++++. .+++ ++ ++.+ + . ++ + .. .+
T Consensus 175 ~~~~~---------------------~~~~--------------~~-~~~~----------~-~--~~--~----~~~~~ 199 (352)
T PF07690_consen 175 PPPPR---------------------ERES--------------PK-ESES----------K-K--PK--P----LKPGF 199 (352)
T ss_dssp -STTT---------------------T--S--------------ST-TTT-------------H--HH--C----CCH-C
T ss_pred ccccc---------------------cccc--------------cc-cccc----------c-c--cc--c----ccccc
Confidence 00000 0000 00 0000 0 0 00 0 11 23
Q ss_pred HHhhhchhHHHHHHHHHhhcccceeeeccHHHH-HHhhCCc---hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh
Q 008210 345 TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQI-GIAQGVH---DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI 420 (574)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~---~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~ 420 (574)
+..++++.+|......++..........+.|.+ .+..|.+ +.+...+...+...+++++.|++.||+++| .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 274 (352)
T PF07690_consen 200 KSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----R 274 (352)
T ss_dssp THHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----H
T ss_pred ccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----H
Confidence 566677777744444444433333455667776 3446666 344567888888999999999999999886 2
Q ss_pred hHHHHHHHHHHHHHHHH---hc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhH
Q 008210 421 WMTCTQVIMIITYLLFA---SS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~---~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 495 (574)
..........+....+. .. +....+....+.|++.+...+....++.|..|++++|++.|+.++..++++. +||
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~-igP 352 (352)
T PF07690_consen 275 RLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGI-IGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HCC
Confidence 22322333333333322 22 2335556778889999999999999999999999999999999999999998 777
No 61
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.92 E-value=2.7e-22 Score=210.91 Aligned_cols=357 Identities=13% Similarity=-0.013 Sum_probs=223.8
Q ss_pred Cccccccc--cCcHHHHHHHHHHHH-hhh-ccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCC
Q 008210 1 MVTLKAGS--RPPWVGLGAAVWVQI-AAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPP 75 (574)
Q Consensus 1 ~~~~~~~~--~~~w~~~~~~~l~~~-~~g-~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~ 75 (574)
|++..+.. +..|..+...+.... ... ....+..-.|.+.++++.+.++.++..+.+.++.. .+++.|.++||+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 80 (413)
T PRK15403 1 MQRMPRFFARHAATLFFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGR 80 (413)
T ss_pred CCCCCcccccccHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCc
Confidence 55555544 444555555444332 222 24556666788999999999999996565666665 49999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHH
Q 008210 76 WLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSA 154 (574)
Q Consensus 76 r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~ 154 (574)
|+++..+.++..++.+.+.. + ++++.+++.|+++|++.+...+....++.+++| ++|++++++...+..+|.
T Consensus 81 r~~l~~~~~~~~~~~~~~~~-----a--~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
T PRK15403 81 RPVLITGALIFTLACAATLF-----T--TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAP 153 (413)
T ss_pred hHHHHHHHHHHHHHHHHHHH-----c--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888655332 2 368899999999999998766666777889998 578999999999999999
Q ss_pred HHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCC
Q 008210 155 AVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPL 234 (574)
Q Consensus 155 ~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (574)
.+++.++..+.+..+|++.+.+..+..++..+..++.
T Consensus 154 ~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~------------------------------------------- 190 (413)
T PRK15403 154 IIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLA------------------------------------------- 190 (413)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Confidence 9988888777655567777665444333322211110
Q ss_pred chhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008210 235 SASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDD 314 (574)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (574)
.|. .+++ ++++ .+
T Consensus 191 ---------------------lp~-------~~~~----------------------~~~~-----------------~~ 203 (413)
T PRK15403 191 ---------------------MPE-------TVKR----------------------GAVP-----------------FS 203 (413)
T ss_pred ---------------------CCC-------Cccc----------------------cCCC-----------------CC
Confidence 000 0000 0000 00
Q ss_pred chHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhh-CCc--hhhHHHH
Q 008210 315 VSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ-GVH--DTTILLS 391 (574)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~--~~~~~~~ 391 (574)
. + .....+++.+|||.+|...+..++.......+....|.+.++. |.+ +.++...
T Consensus 204 ~----------------~------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~ 261 (413)
T PRK15403 204 A----------------K------SVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQV 261 (413)
T ss_pred h----------------H------HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHH
Confidence 0 0 0012346788999999877776665554444555678787774 675 3455555
Q ss_pred HHHHHHhhhhhhhhhhhh-hhhccccCchhhHHHHHHHHHHHHHHHH-----hcCch-HHHHHHHHHhhhccchhhhHHH
Q 008210 392 LFSFCNFVGRLGGGVVSE-HFVRKTIPRTIWMTCTQVIMIITYLLFA-----SSIDG-TLYAATALLGICYGVQFSIMIP 464 (574)
Q Consensus 392 ~~~i~~~ig~~~~G~l~D-r~g~r~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~-~l~~~~~l~g~~~g~~~~~~~~ 464 (574)
....+..++..+.+.+.+ +.++| .. .....+..++..++. ..+.. ..++...+.++|.+...+....
T Consensus 262 ~~~~~~~i~~~l~~~~~~~~~~~~-----~~-~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~ 335 (413)
T PRK15403 262 PVFGAVIVANAIVARFVKDPTEPR-----FI-WRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFR 335 (413)
T ss_pred HHHHHHHHHHHHHHHHhccCCchh-----HH-HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 566666666666666543 33333 11 111111122221111 12222 2345666777777776666553
Q ss_pred HHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 465 TVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 465 ~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
..-.. ....+|++.++.+.....+.. .++...|++.++
T Consensus 336 ~al~~-~~~~~G~a~a~~~~~~~~~~~-~~~~~~g~~~~~ 373 (413)
T PRK15403 336 FTLFS-NNLPKGTVSASLNMVILMVMA-VSVEIGRWLWFN 373 (413)
T ss_pred HHhcc-CCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHc
Confidence 22211 123479999999888888887 788888888776
No 62
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.1e-21 Score=203.43 Aligned_cols=391 Identities=14% Similarity=0.088 Sum_probs=259.2
Q ss_pred HHHhhhC--CCHHHHHH----HHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 37 SLKSVLG--FNQHQLTM----LGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 37 ~l~~~l~--~s~~~~~~----i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
.+.+.++ .+.++..+ +.+++.+|.++ ++..|.++||+|||..++++.++...+.+++.++ ... +.+.++
T Consensus 44 t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s---~~~-~~~e~l 119 (485)
T KOG0569|consen 44 TLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLS---KSA-PSFEML 119 (485)
T ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH---HHh-hhHHHH
Confidence 3344555 45554433 45566777766 9999999999999999999999888886665443 222 368889
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHH-HHhcc-CChhHHHHHHHHHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIY-NMLLH-NSSSKLLLVLAVGVPAVCLV 186 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~-~~l~~-~~~~~~~~~~~~~~~~~~~~ 186 (574)
+++|++.|+..|........++.|.-| +.||.+......+..+|-.++..++ ..+++ .+.|.+++....+|.++..+
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 5799999999999888887775554 33444 45799999999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccC
Q 008210 187 MMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKR 266 (574)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (574)
...+.++.|++.-.+ |
T Consensus 200 ~l~~~PESPk~Ll~~----------------------------------------------------------------k 215 (485)
T KOG0569|consen 200 LLPFLPESPKYLLIK----------------------------------------------------------------K 215 (485)
T ss_pred HHhcCCCCcchHHHH----------------------------------------------------------------c
Confidence 999998887653210 0
Q ss_pred CcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHH
Q 008210 267 TSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTE 346 (574)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (574)
+++++++ .+++..+ ..+ ++.++.+.+.++.+. ++ .+.++..++++
T Consensus 216 ~~~~~A~-------~sl~~y~----G~~------------------~~~~~~e~~~~e~~~----~~--~~~~~~~sl~~ 260 (485)
T KOG0569|consen 216 GDEEEAR-------KALKFYR----GKE------------------DVEAEIEEMLREIEE----EE--LEKKKQISLRQ 260 (485)
T ss_pred CCHHHHH-------HHHHHHh----CCC------------------cchhHHHHHHHHHHH----hc--cccccCCcHHH
Confidence 1100000 0000000 000 000011111001000 00 11123457788
Q ss_pred hhhchhHH----HHHHHHHhh-cccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCch
Q 008210 347 AVVKADFW----LLFLVYFAG-VGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRT 419 (574)
Q Consensus 347 ~l~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~ 419 (574)
.++++... ......++. ..+......|...++++.|++ ++.+.....++.+.+..+.+.++.||+|||
T Consensus 261 ~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR----- 335 (485)
T KOG0569|consen 261 LLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR----- 335 (485)
T ss_pred HhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----
Confidence 88876432 222223333 333344556777888888885 457788889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHh-----cC--chHH---HHHHHHHhhhccch-hhhHHHHHHhhcCccchhhhhhhhhhhhhh
Q 008210 420 IWMTCTQVIMIITYLLFAS-----SI--DGTL---YAATALLGICYGVQ-FSIMIPTVSELFGLEHFGLISNFLALGNPL 488 (574)
Q Consensus 420 ~~~~~~~~~~~i~~~~~~~-----~~--~~~l---~~~~~l~g~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l 488 (574)
++++.+...+.+..+++.. .. ++.- ++...+..++++.. .|+.+-+.+|++|++.|+.+.+...+.+.+
T Consensus 336 pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~ 415 (485)
T KOG0569|consen 336 PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL 415 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH
Confidence 6677666666666555432 11 1211 22233333344433 467778999999999999999999999999
Q ss_pred HHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 008210 489 AAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIRPVYQ 558 (574)
Q Consensus 489 g~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (574)
..++ -...+..+.+.. + ...|..+.+.++++.+..+...+|+|++..
T Consensus 416 ~~fi-v~~~fp~l~~~~---------------------g-~~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 416 SNFI-VGFAFPPLQNVI---------------------G-PYVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred HHHH-HHHHHHHHHHHh---------------------c-chhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 9984 444777776663 1 156777777778877777888888886543
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.92 E-value=3.2e-22 Score=209.22 Aligned_cols=143 Identities=11% Similarity=0.018 Sum_probs=116.9
Q ss_pred cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.+.+....|.+.+++|.+..+.+++.+.+.++..+ +++.|++.||+|||+++.++.+++.+++.++... +++
T Consensus 19 ~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-------~~~ 91 (392)
T PRK10473 19 IDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-------ETS 91 (392)
T ss_pred HHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------CcH
Confidence 44455678999999999999999977777777765 9999999999999999999999988886664322 357
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLA 177 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~ 177 (574)
+.+++.|+++|++.+..++....++.+++| ++|+++.++......+|..++|.+...+.+..+|++.+.+.
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 788889999999999988888899999998 68999999999988888888887777665555566554433
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.91 E-value=1.1e-21 Score=205.12 Aligned_cols=348 Identities=12% Similarity=0.031 Sum_probs=215.7
Q ss_pred hHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHH
Q 008210 35 SHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIAL 113 (574)
Q Consensus 35 ~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 113 (574)
.+.+.++++.+..+.+|+.+.+.+.+. .+++.|+++||+|||+++.++.+++.++++.+... .+ .++.|
T Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-------~~---~~~~r 95 (393)
T PRK11195 26 AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-------IH---PLLAY 95 (393)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-------HH---HHHHH
Confidence 345678999999999997777767665 49999999999999999999999988886553222 12 26789
Q ss_pred HHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcc
Q 008210 114 CVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVR 192 (574)
Q Consensus 114 ~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (574)
+++|++.+..+++...++.+++| ++|++++|+......+|.+++|.+++.+.+.. |+..+.+.....++..+....+
T Consensus 96 ~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~~~~~l- 173 (393)
T PRK11195 96 GLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAALFNLFI- 173 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcC-
Confidence 99999999999999999999998 68999999999999999999988888764421 2222211111111111110100
Q ss_pred cCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCccccc
Q 008210 193 PCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGI 272 (574)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (574)
+.. +++.
T Consensus 174 ----------------------------------------------------------------~~~-------~~~~-- 180 (393)
T PRK11195 174 ----------------------------------------------------------------PRL-------GARR-- 180 (393)
T ss_pred ----------------------------------------------------------------CCC-------cccc--
Confidence 000 0000
Q ss_pred ccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchh
Q 008210 273 LDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKAD 352 (574)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (574)
++.+ +++... . .+. ....++.+++|.
T Consensus 181 -------------------~~~~-----------------~~~~~~--~-----~~~-----------~~~~~~l~~~~~ 206 (393)
T PRK11195 181 -------------------PGQS-----------------WNPIAL--L-----RDF-----------FHACRVLWRDKL 206 (393)
T ss_pred -------------------cccC-----------------CCHHHH--H-----HHH-----------HHHHHHHHhCch
Confidence 0000 000000 0 000 001234566666
Q ss_pred HHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH
Q 008210 353 FWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM 429 (574)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 429 (574)
+.......++.+..........+.+.++ +|.+ +.+...+...++..++.+..+++.||.+++ ..+..+.. .
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~-~ 280 (393)
T PRK11195 207 GRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGIL-M 280 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHH-H
Confidence 5543333222222222233344555554 5664 566777888889999999999999987766 33333432 2
Q ss_pred HHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccc-hhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhh
Q 008210 430 IITYLLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEH-FGLISNFLALGNPLAAFLFSGLLAGYIYDNEAA 507 (574)
Q Consensus 430 ~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~ 507 (574)
.+....+...++ +...+...+.|++.+...+.....+++.-|++. +|.+.++.++..+++.. ++..+.+.+ +..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~-~~~~~~~~~-~~~-- 356 (393)
T PRK11195 281 GLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAML-LMLGLYSLL-VKL-- 356 (393)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHH-HHHHHHHHH-HHc--
Confidence 233223333322 334455667788877776666777777655444 69999999999999998 888888865 442
Q ss_pred hhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 508 KQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
+-+..+++.....++++.+.+.++
T Consensus 357 -------------------~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 357 -------------------GVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666655555555544433
No 65
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.91 E-value=4.5e-22 Score=206.85 Aligned_cols=141 Identities=14% Similarity=0.017 Sum_probs=116.7
Q ss_pred hhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 008210 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (574)
Q Consensus 30 ~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 108 (574)
.+....|.+.+++|++.++.+++.+...++..+ +++.|.+.||+|||+++.++.++..++..++... ++++.
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~~ 81 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTIDQ 81 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHHH
Confidence 345667888999999999999977777777655 9999999999999999999999988887664332 36788
Q ss_pred HHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHH
Q 008210 109 LWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLA 177 (574)
Q Consensus 109 l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~ 177 (574)
+++.|++.|++.+...+....++.+++| ++|++++++...+..+|..+++.+...+.+..+|++.+...
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 8999999999999888888889999998 57999999999999999999888887775544565555433
No 66
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.91 E-value=1.3e-22 Score=209.90 Aligned_cols=339 Identities=15% Similarity=0.111 Sum_probs=204.5
Q ss_pred hccchhhcchHH-HHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008210 26 GNAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (574)
Q Consensus 26 g~~~~~~~~~~~-l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 103 (574)
...+.++.+.|+ +++++|+|..+.+++.+...++..+ +++.|++.||+|||+++.++.+++.++.+++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~------- 87 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA------- 87 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------
Confidence 346677888884 9999999999999987777777755 9999999999999999999999999987664433
Q ss_pred h-hHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 008210 104 L-PYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVP 181 (574)
Q Consensus 104 ~-~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~ 181 (574)
+ +++.+++.|++.|++.+. +.+...++.+++| ++|+++.++......+|..+++.+...+...
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-------------- 152 (366)
T TIGR00886 88 VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS-------------- 152 (366)
T ss_pred hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH--------------
Confidence 3 688899999999999664 4567788999998 6899999998876666666665554433210
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccch
Q 008210 182 AVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMT 261 (574)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (574)
+..... +....+|++.+.........+..+ ...+..+.
T Consensus 153 --------~~~~~~----~~~~~~w~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~--- 190 (366)
T TIGR00886 153 --------LIFGAG----LPAHLAWGWAFVIVPAGILLLPAL---------------------------LIFFVGAD--- 190 (366)
T ss_pred --------HHhccc----ccccccccchhHHHHHHHHHHHHH---------------------------HHHHhccc---
Confidence 000000 000112222221110000000000 00000000
Q ss_pred hcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCC
Q 008210 262 ICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGED 341 (574)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (574)
+++++ +++. +. +. +..+ .. .+....
T Consensus 191 ----~~~~~---------------------~~~~---~~---------~~-~~~~---------------~~--~~~~~~ 215 (366)
T TIGR00886 191 ----TPPGK---------------------PATG---KL---------SF-KGAR---------------WS--VGTGAL 215 (366)
T ss_pred ----CCccc---------------------ccch---hc---------cc-cccc---------------cc--ccchhH
Confidence 00000 0000 00 00 0000 00 000000
Q ss_pred ccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCc
Q 008210 342 FKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPR 418 (574)
Q Consensus 342 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~ 418 (574)
...++.+++|.+|...+..++.......+..+.+.+.++ +|++ +.+...+...+.+.++++++|+++||+|+|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~--- 292 (366)
T TIGR00886 216 GDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR--- 292 (366)
T ss_pred HHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch---
Confidence 134567888898888777766655555556677888765 5774 4566777888899999999999999999982
Q ss_pred hhhHHHHHHHHHHHHHHHH--hcC--ch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhH
Q 008210 419 TIWMTCTQVIMIITYLLFA--SSI--DG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLA 489 (574)
Q Consensus 419 ~~~~~~~~~~~~i~~~~~~--~~~--~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 489 (574)
....+......+..++. ..+ .. ..+....+.+++.|...+.....+.+.+| +++|.++|+.+..+++|
T Consensus 293 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 293 --KLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred --hHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 23333333333333322 221 22 22333344445555555556666777776 79999999988877765
No 67
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=3.3e-22 Score=211.09 Aligned_cols=378 Identities=15% Similarity=0.108 Sum_probs=219.0
Q ss_pred CcHHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHHHHHH
Q 008210 10 PPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFF 88 (574)
Q Consensus 10 ~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~~~ 88 (574)
.-|......++..++.+ ...+.+..++++++|++..+++++.+...++. +.+++.|+++||+|||+++.++...+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWS--SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred chHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 44444443333333332 34555566778889999999999655555655 4599999999999999999887666554
Q ss_pred HHHHHHHHHhhccCChhHHH--HHHHHHHHHhhhHhhhhHHHHHHH---hhCCCCcchHHHHHHhhhhhHHHHHHHHHHH
Q 008210 89 GYGVLWLAVSRTVESLPYWL--LWIALCVATNSSAWLGTAVLVTNM---RNFPLSRGTVAGILKGYGGLSAAVFTEIYNM 163 (574)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~--l~~~~~l~G~g~g~~~~~~~~~~~---~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~ 163 (574)
+....... ... +.+. ......+.++..+..+......+. +.+++++|.+.|......++|..+++++.+.
T Consensus 89 ~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 163 (420)
T PRK09528 89 LFGPFFIY--VFA---PLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGI 163 (420)
T ss_pred HHHHHHHH--HHH---HHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHH
Confidence 43221111 000 0111 111222223322322222222233 3345678888888888888999999888776
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHH
Q 008210 164 LLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASL 243 (574)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
+... .|+..+....+..++..+..++.++
T Consensus 164 l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 192 (420)
T PRK09528 164 LFNI-NPQINFWLGSGSALILLVLLFFAKP-------------------------------------------------- 192 (420)
T ss_pred HHhc-CchHhHHHHHHHHHHHHHHHhcccc--------------------------------------------------
Confidence 6432 3444333332222222111111110
Q ss_pred HHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Q 008210 244 FIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLA 323 (574)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (574)
++++ ++ + + +++
T Consensus 193 -----------------------~~~~-----------------------~~----~----------~-~~~-------- 203 (420)
T PRK09528 193 -----------------------DAPS-----------------------TA----K----------V-ANA-------- 203 (420)
T ss_pred -----------------------cccc-----------------------hh----h----------h-ccc--------
Confidence 0000 00 0 0 000
Q ss_pred hhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh----hCCc--hhhHHHHHHHHHH
Q 008210 324 EGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA----QGVH--DTTILLSLFSFCN 397 (574)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~i~~ 397 (574)
++ ++ ++.......++.+|+|.+|.+.+..++..........+.+.+..+ .+.+ ..+...+...+..
T Consensus 204 ---~~---~~--~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 275 (420)
T PRK09528 204 ---LG---AN--ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLE 275 (420)
T ss_pred ---hh---cc--cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHH
Confidence 00 00 000011223567788887765443333222112222234555443 2332 3456777788888
Q ss_pred hhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchh
Q 008210 398 FVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFG 476 (574)
Q Consensus 398 ~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g 476 (574)
.++.+.+|++.||+|+| ..+..+.++..++..+.... ++..+++...+.|++.+...+....++.|.+|++.++
T Consensus 276 ~~~~~~~g~l~dr~g~~-----~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a 350 (420)
T PRK09528 276 ALIMFFAPFIINRIGAK-----NALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSA 350 (420)
T ss_pred HHHHHHHHHHHHHhCcc-----hhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccee
Confidence 99999999999999999 44555555566665555543 4445555667777777666666667889999999999
Q ss_pred hhhhh-hhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 477 LISNF-LALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 477 ~~~g~-~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
+.++. .++...+|+. ++|.+.|++.|.. +|+.+|++.+++.++..++.+..
T Consensus 351 ~~~~~~~~~~~~lg~~-ig~~~~G~l~~~~---------------------G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 351 TIYLVGFQFAKQLGAV-FLSTLAGNLYDSI---------------------GFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred eeeeehHHHHHHHHHH-HHHHHHHHHHHhh---------------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 88776 5677889988 8999999999983 58999998887776665554433
No 68
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=5.1e-22 Score=209.01 Aligned_cols=188 Identities=13% Similarity=0.058 Sum_probs=137.9
Q ss_pred HHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc----------hhhHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 008210 345 TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH----------DTTILLSLFSFCNFVGRLGGGVVSEHFVRK 414 (574)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r 414 (574)
++.+|+|.++.+.+..++..........+.+.+.++.|.+ ..+...+...+..+++.+..|+++||+|+|
T Consensus 202 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r 281 (418)
T TIGR00889 202 FILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK 281 (418)
T ss_pred HHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 4678888887776666664333333334556666666532 346777888889999999999999999999
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHhcC--c---hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhh-hhhhh
Q 008210 415 TIPRTIWMTCTQVIMIITYLLFASSI--D---GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLA-LGNPL 488 (574)
Q Consensus 415 ~~~~~~~~~~~~~~~~i~~~~~~~~~--~---~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~l 488 (574)
+++..+.++..+++.++...+ . ..+++..++.|++.+...+....++.|.+|++.+|+++|+.+ +...+
T Consensus 282 -----~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 282 -----KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGF 356 (418)
T ss_pred -----HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh
Confidence 667777777777665554321 1 234456777888888777887889999999999999999997 56788
Q ss_pred HHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 008210 489 AAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 489 g~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (574)
++. +||.+.|++.|+.+.... .+|+.+|++.+++.+++.++.+++.++.
T Consensus 357 g~~-iGp~l~G~l~~~~g~~~~---------------~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 357 GSL-LGYILSGVMVEKMFAYGT---------------FDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHH-HHHHHHHHHHHHhccccC---------------CchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 987 899999999998532110 1488999988888888777776666554
No 69
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.91 E-value=2.2e-21 Score=203.03 Aligned_cols=345 Identities=13% Similarity=0.033 Sum_probs=219.7
Q ss_pred cHHHHHHHHHHHHhh-hccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHH
Q 008210 11 PWVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFF 88 (574)
Q Consensus 11 ~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~ 88 (574)
.|+.+....+...+. ...+.+....|++.+++|.+..+.+++.+.+.++..+ +++.|.++||+|||+++.++.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 344444444443322 2344555667889999999999999977777777765 99999999999999999999988888
Q ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC
Q 008210 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (574)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~ 167 (574)
+.+++... ++++.+++.|++.|++.+...+.......++++ ++|+.+.++...+..++..++|.+...+.+.
T Consensus 86 ~~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 158 (394)
T PRK11652 86 GTLVALFA-------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL 158 (394)
T ss_pred HHHHHHHH-------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 86553322 367889999999999998877777778888888 5899999999988888888888888776555
Q ss_pred ChhHHHHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHH
Q 008210 168 SSSKLLLVLAVGVPAVCLVM-MYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIM 246 (574)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (574)
.+|++.+....+..++..+. .++.+
T Consensus 159 ~g~~~~f~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 184 (394)
T PRK11652 159 FGWRACYLFLLLLGAGVTFSMARWMP------------------------------------------------------ 184 (394)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------------
Confidence 55665554332221111100 00000
Q ss_pred HHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhc
Q 008210 247 IILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGE 326 (574)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (574)
++ ++ + ++++
T Consensus 185 --------------------~~-------------------------~~----~------------~~~~---------- 193 (394)
T PRK11652 185 --------------------ET-------------------------RP----A------------DARR---------- 193 (394)
T ss_pred --------------------cc-------------------------Cc----c------------ccch----------
Confidence 00 00 0 0000
Q ss_pred cchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhh
Q 008210 327 GAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLG 403 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~ 403 (574)
++ ....+++.+|+|.+|......+........+....+.+.++ .|.+ +.++......++..++.++
T Consensus 194 ---------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 262 (394)
T PRK11652 194 ---------TR--VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWF 262 (394)
T ss_pred ---------hH--HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01223566777777755444333222222222334556655 6765 3455555666777777788
Q ss_pred hhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh---cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhh
Q 008210 404 GGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS---SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISN 480 (574)
Q Consensus 404 ~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g 480 (574)
.+++.||++++. ...........+.+..... .+...+....++.|++.+..++.......|.+| +++|.+.+
T Consensus 263 ~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~ 337 (394)
T PRK11652 263 AGRPNKRFSTLM----WQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGA 337 (394)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHH
Confidence 888888776431 1111122222222111111 122345556677788888888888888889886 68899999
Q ss_pred hhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 481 FLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 481 ~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
+.+....+++. +++.+.+.+.+.
T Consensus 338 ~~~~~~~lg~~-~~~~~~~~~~~~ 360 (394)
T PRK11652 338 LLGGLQNIGSG-LAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHH-HHHHHHHHccCC
Confidence 99999999998 889888887554
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.91 E-value=1.8e-22 Score=210.26 Aligned_cols=334 Identities=14% Similarity=0.043 Sum_probs=207.0
Q ss_pred cchhhcchHHHHhhhC--CCHHHHHHHHHH--HH---hhh-hccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhh
Q 008210 28 AYNFPLYSHSLKSVLG--FNQHQLTMLGVA--ND---IGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSR 99 (574)
Q Consensus 28 ~~~~~~~~~~l~~~l~--~s~~~~~~i~~~--~~---~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~ 99 (574)
.+.++...+.+.+++. .++++.++..+. +. +.. +.+++.|+++||+|||+++.++.++..++++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--- 85 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL--- 85 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC---
Confidence 4455556666766643 445555553222 11 222 238999999999999999999999998887664332
Q ss_pred ccCChh------HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhcc------
Q 008210 100 TVESLP------YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH------ 166 (574)
Q Consensus 100 ~~~~~~------~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~------ 166 (574)
.+.+ .+.+++.|+++|++.+...+....++.+++| ++|+++.++...+..+|..+++.+...+..
T Consensus 86 --~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~ 163 (394)
T TIGR00883 86 --PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDA 163 (394)
T ss_pred --CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 2111 1246778999999999988889999999997 689999999999999998888776554321
Q ss_pred --CChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHH
Q 008210 167 --NSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLF 244 (574)
Q Consensus 167 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (574)
...|++.+.+..+..++.......
T Consensus 164 ~~~~~w~~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 189 (394)
T TIGR00883 164 LLEWGWRIPFLVSAVLVLIGLYLRRN------------------------------------------------------ 189 (394)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHh------------------------------------------------------
Confidence 122333332222111111000000
Q ss_pred HHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhh
Q 008210 245 IMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAE 324 (574)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (574)
.+ + ++ +.+++
T Consensus 190 -----------~~---------~--------------------------~~-----------------~~~~~------- 199 (394)
T TIGR00883 190 -----------LE---------E--------------------------TP-----------------VFEKA------- 199 (394)
T ss_pred -----------cC---------C--------------------------Ch-----------------hHHHH-------
Confidence 00 0 00 00000
Q ss_pred hccchhhhccCCCCCCCccHHHhhhchh--HHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhh
Q 008210 325 GEGAVRRKKRRPKRGEDFKFTEAVVKAD--FWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFV 399 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~i 399 (574)
+ ++ + +....+.++.++++. ++......++..........+.|.+.++ .|.+ +.+...+...+...+
T Consensus 200 --~----~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 270 (394)
T TIGR00883 200 --Q----EK--H-KKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFI 270 (394)
T ss_pred --H----hc--c-ccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHH
Confidence 0 00 0 000122345555544 5555555544444444445667777754 6664 455677788889999
Q ss_pred hhhhhhhhhhhhhccccCchhhHH-HHHHHHHHHHHH-HHh--cCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccc
Q 008210 400 GRLGGGVVSEHFVRKTIPRTIWMT-CTQVIMIITYLL-FAS--SID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEH 474 (574)
Q Consensus 400 g~~~~G~l~Dr~g~r~~~~~~~~~-~~~~~~~i~~~~-~~~--~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 474 (574)
++++.|+++||+||| ..+. .+.+....+... ... .+. ...+....+.|++.+...+.....+.|.+|+++
T Consensus 271 ~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 345 (394)
T TIGR00883 271 TIPLSGALSDRIGRR-----PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV 345 (394)
T ss_pred HHHHHHHHHHHhchH-----HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc
Confidence 999999999999998 3333 222222222111 111 222 244455667778888888888899999999999
Q ss_pred hhhhhhhhh-hhhhhHHHHHhHhHHHhhhhhh
Q 008210 475 FGLISNFLA-LGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 475 ~g~~~g~~~-~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
++++.|+.+ ....+++. ++|.+.|.+.|+.
T Consensus 346 ~~~~~~~~~~~~~~~g~~-~~p~~~g~l~~~~ 376 (394)
T TIGR00883 346 RYTGASLAYNLAGAIFGG-FAPYIAAALVAMT 376 (394)
T ss_pred eeeEeeehhHhHHHHHhh-HHHHHHHHHHHHc
Confidence 999999854 55667776 8999999999984
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.91 E-value=1.8e-21 Score=208.80 Aligned_cols=366 Identities=12% Similarity=0.103 Sum_probs=232.8
Q ss_pred HHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccC-----CChHH-HHHHHHHHHHHHHHH
Q 008210 21 VQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKF-----PPWLV-LFIGSLACFFGYGVL 93 (574)
Q Consensus 21 ~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~-----G~r~~-~~~g~~~~~~g~~~~ 93 (574)
..+..|. .+......|.+.++.|.+.++++.++.... .....+++|.++||+ |||+. +.++.+...++...+
T Consensus 20 l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~-~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~ 98 (491)
T PRK11010 20 LGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQ-AYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAM 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 3333444 333444566677788999999998644332 235699999999999 99985 556666666664443
Q ss_pred HHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhcc-CChhH
Q 008210 94 WLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH-NSSSK 171 (574)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~-~~~~~ 171 (574)
.+. .+..+++.+.+.+++.|++.+...++...++.+++| ++||++.++...++.+|.++++.+...+.+ ..+|+
T Consensus 99 a~~----~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr 174 (491)
T PRK11010 99 GFL----EPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQ 174 (491)
T ss_pred HHc----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHH
Confidence 221 122357888889999999999888888899999998 689999999999999999999888877766 34677
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHh
Q 008210 172 LLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLM 251 (574)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (574)
..+.+..+..++..+..++.++.+
T Consensus 175 ~~f~i~a~l~ll~~l~~~~~~e~~-------------------------------------------------------- 198 (491)
T PRK11010 175 GMYWLMAALLIPCIIATLLAPEPT-------------------------------------------------------- 198 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCc--------------------------------------------------------
Confidence 766654433333222221111000
Q ss_pred hhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhh
Q 008210 252 APLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRR 331 (574)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (574)
+. .+++ ++.
T Consensus 199 -----------------~~---------------------~~~~-----------------~~~---------------- 207 (491)
T PRK11010 199 -----------------DT---------------------IPVP-----------------KTL---------------- 207 (491)
T ss_pred -----------------cc---------------------cccc-----------------cch----------------
Confidence 00 0000 000
Q ss_pred hccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHH-HhhCCc--hhhHHH-HHHHHHHhhhhhhhhhh
Q 008210 332 KKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIG-IAQGVH--DTTILL-SLFSFCNFVGRLGGGVV 407 (574)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~--~~~~~~-~~~~i~~~ig~~~~G~l 407 (574)
+ + ....++++.++++.+|......++..........+.+++. ++.|++ +.+... ....++.++|.+++|++
T Consensus 208 ~---~--~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L 282 (491)
T PRK11010 208 E---Q--AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGIL 282 (491)
T ss_pred h---h--hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0011245566677776554444333222222333455554 457875 344554 34557899999999999
Q ss_pred hhhhhccccCchhhHHHHHHHHHHHHH---HHHhc-Cch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhh
Q 008210 408 SEHFVRKTIPRTIWMTCTQVIMIITYL---LFASS-IDG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFL 482 (574)
Q Consensus 408 ~Dr~g~r~~~~~~~~~~~~~~~~i~~~---~~~~~-~~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 482 (574)
+||+|+| ..+..+.++..++.+ .+... ++. .+.....+..++.|...+...++..+..+++..++.+|+.
T Consensus 283 ~dr~g~~-----~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~ 357 (491)
T PRK11010 283 MQRLSLF-----RALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALL 357 (491)
T ss_pred HHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 9999987 233333333233222 22222 222 2333444444455555566678888999999999999999
Q ss_pred hhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 483 ALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 483 ~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
+...+++.. +++.+.|++.|.. +|+..|.+..++++++++.....+
T Consensus 358 ~s~~~lg~~-~~~~~~G~l~~~~---------------------G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 358 SALSAVGRV-YVGPVAGWFVEAH---------------------GWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHh---------------------ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 6777999999973 588889888888888776665543
No 72
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=3.2e-21 Score=205.05 Aligned_cols=384 Identities=15% Similarity=0.086 Sum_probs=251.7
Q ss_pred hhcchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 31 FPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 31 ~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
.+...+.+..|+|-+ ...+|+++...++.. ..++.|+++|.||||.+++++.++..+|.+.+ +.+ ++...+
T Consensus 63 ~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~-----atA--~~~~~~ 134 (599)
T PF06609_consen 63 PASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC-----ATA--QNMNTF 134 (599)
T ss_pred cHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh-----hcC--CcHHHH
Confidence 345557888899854 667787776666665 49999999999999999999999999997663 333 367889
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHH-
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVM- 187 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~- 187 (574)
+.+.++.|+|.|.... ....++|..| |+|+...++.....-....+++.+...+....+|||.+.+..+...++++.
T Consensus 135 iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 135 IAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999988764 4555889998 789887777766554444455666666666678999888887765555443
Q ss_pred HHhcccCCCCCC--CCC---CCCcchhhHHHHH--HHHHHHHHHHhhhccc-CCCchhhhhhHHHHHHHHHhhhhccccc
Q 008210 188 MYFVRPCTPASG--EDS---AAPSHFLFTQAAS--VVLGFFLLTTTILDHM-IPLSASISYASLFIMIILLMAPLAIPVK 259 (574)
Q Consensus 188 ~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (574)
.++++|+++... ++. +.-++.++.+... ..+..|++-....... .+|+.......++++..++.++.+++..
T Consensus 214 ~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~ 293 (599)
T PF06609_consen 214 FFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF 293 (599)
T ss_pred HHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh
Confidence 455555443211 111 1112233433332 2333333444444443 5787877777777777777766655321
Q ss_pred chhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCC
Q 008210 260 MTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRG 339 (574)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (574)
. .+++|++ |
T Consensus 294 ~------------------------------~~~~Pl~--------------------------------------P--- 302 (599)
T PF06609_consen 294 G------------------------------APKDPLF--------------------------------------P--- 302 (599)
T ss_pred c------------------------------cCCCCcC--------------------------------------C---
Confidence 0 0122221 1
Q ss_pred CCccHHHhhhc-hhHHHHHHHHHhhcccceeeeccHHHHHHhh-CCc-----hhhHHHHHHHHHHhhhhhhhhhhhhhhh
Q 008210 340 EDFKFTEAVVK-ADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ-GVH-----DTTILLSLFSFCNFVGRLGGGVVSEHFV 412 (574)
Q Consensus 340 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-----~~~~~~~~~~i~~~ig~~~~G~l~Dr~g 412 (574)
++++|+ |.++...++.++.....+....+.|+..... +-+ ..++.....+++..+|.++.|.+.-+++
T Consensus 303 -----~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 303 -----HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR 377 (599)
T ss_pred -----HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence 456776 4566655555554333344445556655442 222 2456666788888888899999998775
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHHhc---CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhH
Q 008210 413 RKTIPRTIWMTCTQVIMIITYLLFASS---IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLA 489 (574)
Q Consensus 413 ~r~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 489 (574)
|-| +.+.++.+++.+++-+++.. +....+...++.|++.|.........++-..|.++.|.+.|+..+.+.+|
T Consensus 378 ~~K----w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~G 453 (599)
T PF06609_consen 378 HIK----WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIG 453 (599)
T ss_pred chh----HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHh
Confidence 443 45556666666655555432 23355667778888888776666666677789999999999999999999
Q ss_pred HHHHhHhHHHhhhhh
Q 008210 490 AFLFSGLLAGYIYDN 504 (574)
Q Consensus 490 ~~~~gp~l~g~l~~~ 504 (574)
+. +|..++..++.+
T Consensus 454 Gs-Ig~aIy~~I~~n 467 (599)
T PF06609_consen 454 GS-IGYAIYNAIFTN 467 (599)
T ss_pred hH-HHHHHHHHHHHh
Confidence 98 788888777653
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.90 E-value=3e-21 Score=201.14 Aligned_cols=324 Identities=11% Similarity=0.056 Sum_probs=225.6
Q ss_pred hcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHH----HHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVL----FIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 32 ~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~----~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
..+.|.+.+++|+|.++++++.+...+.. +.+++.|.++||+|||+.. .++..++.+ ..... . +++
T Consensus 24 ~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~-------~~~~~-~-~~~ 94 (382)
T TIGR00902 24 LPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA-------AFSAG-A-HNA 94 (382)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-------HHHHh-h-hhH
Confidence 34466778899999999999655555554 5599999999999985433 222222211 11111 1 368
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLV 186 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (574)
|.+++.|+++|.+.+...+....++. +++++|+++.|....+.++|.++++++.+.+.+..+|+..+.......++.+
T Consensus 95 ~~l~~~~~l~~~~~~~~~p~~~al~~-~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~- 172 (382)
T TIGR00902 95 WLLFIAIGLFALFFSAGMPIGDALAN-TWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML- 172 (382)
T ss_pred HHHHHHHHHHHHHHccchhHHHHHHH-HHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-
Confidence 99999999999888876666655554 4577899999999999999999999998888765556655432211100000
Q ss_pred HHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccC
Q 008210 187 MMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKR 266 (574)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (574)
.....+ + +
T Consensus 173 ~~~~~~----------------------------------------------------------------~--------~ 180 (382)
T TIGR00902 173 IGFLIK----------------------------------------------------------------P--------T 180 (382)
T ss_pred HHHHcC----------------------------------------------------------------C--------C
Confidence 000000 0 0
Q ss_pred CcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHH
Q 008210 267 TSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTE 346 (574)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (574)
++ ++++ + ++ + +.....+.++
T Consensus 181 ~~-----------------------~~~~---------------~-~~-----------------~----~~~~~~~~~~ 200 (382)
T TIGR00902 181 IP-----------------------PKDA---------------I-PE-----------------D----ESQGDSAFIA 200 (382)
T ss_pred CC-----------------------CCcc---------------c-cc-----------------c----ccccchhHHH
Confidence 00 0000 0 00 0 0001123568
Q ss_pred hhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHH
Q 008210 347 AVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTC 424 (574)
Q Consensus 347 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~ 424 (574)
.+|+|++|.+....++.......+..+.+.+.++.|.+ ..+...+...++..++.+..+++.||+++| ..+.+
T Consensus 201 ~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~ 275 (382)
T TIGR00902 201 LLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLI 275 (382)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHH
Confidence 89999999988877776666666677888888888885 456677778888889999999999999988 66777
Q ss_pred HHHHHHHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhh-hhhhhHHHHHhHhHHHhhh
Q 008210 425 TQVIMIITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLA-LGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 425 ~~~~~~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~lg~~~~gp~l~g~l~ 502 (574)
+.+...+...++...+ .+.+++...+-|++.+...+....++++. |++++++..++.+ ...++|.. ++|.+.|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~-~g~~~~G~l~ 353 (382)
T TIGR00902 276 SAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIA-IFTAFAGFIY 353 (382)
T ss_pred HHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 7788887777766444 34566778888999999888888889888 8899999999986 46678887 8999999999
Q ss_pred hhh
Q 008210 503 DNE 505 (574)
Q Consensus 503 ~~~ 505 (574)
|+.
T Consensus 354 ~~~ 356 (382)
T TIGR00902 354 PTL 356 (382)
T ss_pred Hhc
Confidence 984
No 74
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=7.8e-21 Score=198.78 Aligned_cols=363 Identities=15% Similarity=0.102 Sum_probs=213.0
Q ss_pred cCcHHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHH-HHHHHhhhhccccchhccccCCChHHHH-HHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASNKFPPWLVLF-IGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i-~~~~~~~~~~~~~~G~l~dr~G~r~~~~-~g~~~~ 86 (574)
.+.|..++..++..+..+ ...+.+.+++++++|.+.++++++ ++....+...+++.|.+.||+|+|+.++ .+.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~--~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGA--LQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred chhHHHHHHHHHHHHHHH--HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 344555555444443333 234555566889999999999996 5555667777555555599999998754 444444
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHH-HHHHhhhHhhhhHHHHHHHhhCCC-Cc--chHHHHHHhhhhhHHHHHHHHHH
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIAL-CVATNSSAWLGTAVLVTNMRNFPL-SR--GTVAGILKGYGGLSAAVFTEIYN 162 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~-~l~G~g~g~~~~~~~~~~~~~fp~-~r--g~a~gi~~~~~~~g~~i~~~i~~ 162 (574)
.+++.++. ++ ++++.+++.+ ++.|.+ +...+....++.++.++ .| +...++...+.++|.+++|++..
T Consensus 93 ~~~~~~~~-----~~--~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~ 164 (393)
T PRK15011 93 VLACTLFA-----WN--RNYFVLLFVGVFLSSFG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAY 164 (393)
T ss_pred HHHHHHHH-----Hh--hHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 45543322 22 3577766554 444544 44556666666666653 33 34457888888899999999998
Q ss_pred HhccCChhHHHHHHHHHHHHHHHHHHH-hcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhh
Q 008210 163 MLLHNSSSKLLLVLAVGVPAVCLVMMY-FVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYA 241 (574)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (574)
.+.+..+|+..+....+..++..+..+ +.++.+
T Consensus 165 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 198 (393)
T PRK15011 165 ALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR---------------------------------------------- 198 (393)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC----------------------------------------------
Confidence 886666777666544433222221111 111000
Q ss_pred HHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 008210 242 SLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALL 321 (574)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (574)
++++ . ++.
T Consensus 199 --------------------------------------------------~~~~----~------------~~~------ 206 (393)
T PRK15011 199 --------------------------------------------------KELP----L------------ATG------ 206 (393)
T ss_pred --------------------------------------------------CCCc----c------------ccc------
Confidence 0000 0 000
Q ss_pred HhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHh
Q 008210 322 LAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNF 398 (574)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ 398 (574)
+ .+. .+ + +.+..+......+..+.....+..+.|.+.++ +|++ +.+...+...+...
T Consensus 207 ------~---~~~-~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i 266 (393)
T PRK15011 207 ------T---LEA-PR--------R--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEI 266 (393)
T ss_pred ------c---ccc-cc--------c--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 0 000 00 0 00111222222222222222233467767654 6775 44556666667788
Q ss_pred hhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhh
Q 008210 399 VGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGL 477 (574)
Q Consensus 399 ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~ 477 (574)
+++++.|+++||++|| ..+..+.....+.+...... +.....+...+.+++.|...+..+.+..|.+|+ ++|.
T Consensus 267 ~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~ 340 (393)
T PRK15011 267 PTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGS 340 (393)
T ss_pred HHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Ccch
Confidence 8999999999999999 33333333333333222222 233334445555566666666667778899874 5999
Q ss_pred hhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 478 ISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 478 ~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
+.++.+....+|.. ++|.+.|.+.|.. +|+..|++..++.+++++..+
T Consensus 341 ~~~~~~~~~~lg~~-~g~~l~G~i~~~~---------------------g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 341 ATTLYTNTSRVGWI-IAGSLAGIVAEIW---------------------NYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHh---------------------hhHHHHHHHHHHHHHHHHHHH
Confidence 99999888899998 8999999999873 488888877777777665544
No 75
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.1e-20 Score=186.98 Aligned_cols=356 Identities=18% Similarity=0.166 Sum_probs=246.7
Q ss_pred hhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008210 24 AAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (574)
Q Consensus 24 ~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 101 (574)
..|. ...-.++.|.+++.|+++..|.+.+-.++..++.. +++.|.+.+|+|.|+.+.+|..++++|+.+++-+ +
T Consensus 24 l~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA----a 99 (422)
T COG0738 24 LWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA----A 99 (422)
T ss_pred HHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh----h
Confidence 3454 55667889999999999999999998888888865 9999999999999999999999999998886533 2
Q ss_pred CChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHH
Q 008210 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGV 180 (574)
Q Consensus 102 ~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~ 180 (574)
...+|..++++-++.|.|.+....+...+++...| ++...-+++..+.+++|++++|+++..+...+ |.. ...+
T Consensus 100 ~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~-~~~----~~~~ 174 (422)
T COG0738 100 SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG-VAL----TMSA 174 (422)
T ss_pred hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh-hhh----ccCH
Confidence 22367788888999999999999999999999997 46777899999999999999999998774321 000 0000
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccc
Q 008210 181 PAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKM 260 (574)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (574)
...-..... ....+++.+...+ .++++. .... ..
T Consensus 175 ~~~~~~~~~------------~~~~v~~pYl~~~-----~~lvll-------------------------~v~~-~~--- 208 (422)
T COG0738 175 AQILAIKGA------------DASSVQFPYLILA-----GLLVLL-------------------------AVLI-LL--- 208 (422)
T ss_pred HHHHHHHHH------------HHHhhhhHHHHHH-----HHHHHH-------------------------HHHH-Hh---
Confidence 000000000 0001111121111 000000 0000 00
Q ss_pred hhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCC
Q 008210 261 TICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGE 340 (574)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (574)
.|.++. ++ +++ + . .+. .
T Consensus 209 ----~k~p~~-----------------------~~-----------------~~~-----------~----~---~~~-~ 225 (422)
T COG0738 209 ----SKLPDL-----------------------QV-----------------AAP-----------S----L---GAS-G 225 (422)
T ss_pred ----ccCCcC-----------------------Cc-----------------ccc-----------c----c---ccc-c
Confidence 011100 00 000 0 0 000 1
Q ss_pred CccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccC
Q 008210 341 DFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIP 417 (574)
Q Consensus 341 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~ 417 (574)
+....+++|+|.++...+..|++.+...+...+++.|..+ .|.+ +++..++.+.++.++||.++-++..|+...
T Consensus 226 ~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--- 302 (422)
T COG0738 226 SAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--- 302 (422)
T ss_pred cchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH---
Confidence 1145788999999999999999999999999999999988 7774 567899999999999999999999987555
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 418 RTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 418 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
..+.+..+...+-++.....+.........++|++.+..||++.....+..| ++...+.+++.+ ..+|++ +-|++
T Consensus 303 --k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~m-aivGGA-iiP~l 377 (422)
T COG0738 303 --KYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVM-AIVGGA-IIPPL 377 (422)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeee-heecch-HHHHH
Confidence 3444443333333333334444555567788899999999999999999998 665666555544 577777 77999
Q ss_pred HHhhhhhh
Q 008210 498 AGYIYDNE 505 (574)
Q Consensus 498 ~g~l~~~~ 505 (574)
.|++.|+.
T Consensus 378 ~G~i~d~~ 385 (422)
T COG0738 378 QGVIADMF 385 (422)
T ss_pred HHHHHHhh
Confidence 99999995
No 76
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=4.5e-20 Score=197.34 Aligned_cols=398 Identities=12% Similarity=0.077 Sum_probs=237.7
Q ss_pred cCcHHHHHHHHHHHHhhh-ccchh-hcchHHHHhhhCCCHHHHHHH-HHHHHhhhhccccchhcccc-CCChHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAG-NAYNF-PLYSHSLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASNK-FPPWLVLFIGSL 84 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g-~~~~~-~~~~~~l~~~l~~s~~~~~~i-~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~g~~ 84 (574)
+++|..+...++..+... ..|.. +.+..++++++|++.++.+|+ +.+..+.+...+++|+++|| +|||+++.+|.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 345555555555554443 35543 345567788999999999995 44444566668899999999 999999999999
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-C--CcchHHHHHHhhhhhHHHHHHHHH
Q 008210 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-L--SRGTVAGILKGYGGLSAAVFTEIY 161 (574)
Q Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~--~rg~a~gi~~~~~~~g~~i~~~i~ 161 (574)
++.++++++++. .+ ....+++.|+++|+|.|...+....++.++|| + +|+.+.++...+.++|+.++|.+.
T Consensus 90 ~~~~g~~~~~~~-----~~-~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 90 VLAIGYFMTGMS-----LL-KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHHHHHHHHh-----cc-chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 999998775543 11 12345578999999999999889999999997 3 357789999999999999999988
Q ss_pred HHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHH--HHHHHHHHHHHhhhcccCCCchhhh
Q 008210 162 NMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAA--SVVLGFFLLTTTILDHMIPLSASIS 239 (574)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (574)
+.+.+..+|++.+.+..+..++.++.....++..++.+.+++. ...+..... ...+...........+. .....
T Consensus 164 g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~ 239 (489)
T PRK10207 164 PVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDH-KPMSFSKLLLVLLGSVVMIFVCAWLMHN---VEVAN 239 (489)
T ss_pred HHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCc-cchhhhhHHHHHHHHHHHHHHHHHHHhh---hhHHH
Confidence 8887777788888776544444444444433222111111101 011111111 01111111111110100 01111
Q ss_pred hhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHH
Q 008210 240 YASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVA 319 (574)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (574)
....++.+.....+ ..+ +
T Consensus 240 ~~~~~~~~i~~~~f----~~~------~---------------------------------------------------- 257 (489)
T PRK10207 240 LVLIVLSIVVTIIF----FRE------A---------------------------------------------------- 257 (489)
T ss_pred HHHHHHHHHHHHHH----HHH------H----------------------------------------------------
Confidence 11111111111111 100 0
Q ss_pred HHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHH--HHHhhcccceeeeccHHHHHHh-h-----CCc-hhhHHH
Q 008210 320 LLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFL--VYFAGVGSGVTVLNNLAQIGIA-Q-----GVH-DTTILL 390 (574)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~-----g~~-~~~~~~ 390 (574)
.+ . .+.+|+|.+-...+ .....+.......+.++.+.++ . |+. ......
T Consensus 258 ------------~~--~--------~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~ 315 (489)
T PRK10207 258 ------------FK--L--------DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQ 315 (489)
T ss_pred ------------hc--C--------CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHH
Confidence 00 0 01223333322111 1222222222333445555543 1 332 344555
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhccc--cCchhhHHHHHHHHHHHHHHHH-----h--c----CchHHHHHHHHHhhhccc
Q 008210 391 SLFSFCNFVGRLGGGVVSEHFVRKT--IPRTIWMTCTQVIMIITYLLFA-----S--S----IDGTLYAATALLGICYGV 457 (574)
Q Consensus 391 ~~~~i~~~ig~~~~G~l~Dr~g~r~--~~~~~~~~~~~~~~~i~~~~~~-----~--~----~~~~l~~~~~l~g~~~g~ 457 (574)
+...+...+..|+.+++.||+++|+ .+....+.++.++.+++++.+. . . +.+.+.....+.|+|.+.
T Consensus 316 ~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~ 395 (489)
T PRK10207 316 ALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELF 395 (489)
T ss_pred hHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 5666667778888999999999883 2333345566666666664321 1 1 123456678888999999
Q ss_pred hhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 458 QFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
..+.....+.+..|++.+|.++|+.+...++|+. +|..+.+..
T Consensus 396 ~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~-lg~~l~~~~ 438 (489)
T PRK10207 396 ISALGLAMIAALVPQHLMGFILGMWFLTQAAAFL-LGGYVATFT 438 (489)
T ss_pred HhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 9999899999999999999999999999999998 777666544
No 77
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.89 E-value=4.1e-20 Score=180.12 Aligned_cols=368 Identities=15% Similarity=0.101 Sum_probs=271.2
Q ss_pred CcHHHHHHHHHHHHhh-hccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHHHHH
Q 008210 10 PPWVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACF 87 (574)
Q Consensus 10 ~~w~~~~~~~l~~~~~-g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~~ 87 (574)
+.|+.+...+++.+.. ......+...+++++|+|+|.++.+.+++.-.+.. .++++..++++|+|.++.+.++.++..
T Consensus 9 ~~~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~ 88 (395)
T COG2807 9 RPLLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIA 88 (395)
T ss_pred CchHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHH
Confidence 3366666666665544 34667888899999999999999999877776665 559999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccC
Q 008210 88 FGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (574)
Q Consensus 88 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~ 167 (574)
+|..+ .... +.+.++..-++.|.|.+..+..-...+-++|||+-+..+|++....++|+++++-+..-+.+.
T Consensus 89 ~G~~i-----R~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~ 160 (395)
T COG2807 89 AGILI-----RSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQH 160 (395)
T ss_pred HHHHH-----Hhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHh
Confidence 99655 2221 246778889999999999999999999999999999999999999999888877776655443
Q ss_pred C-hhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHH
Q 008210 168 S-SSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIM 246 (574)
Q Consensus 168 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (574)
. +|+.-+.+.+.+.++.++.++...
T Consensus 161 ~~gW~~aL~~WAl~allAl~~WlPq~------------------------------------------------------ 186 (395)
T COG2807 161 SGGWRGALGFWALLALLALLIWLPQA------------------------------------------------------ 186 (395)
T ss_pred hccHHHHHHHHHHHHHHHHHHHhhhc------------------------------------------------------
Confidence 3 577666666666555444332110
Q ss_pred HHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhc
Q 008210 247 IILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGE 326 (574)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (574)
.+ .+.+ + .+
T Consensus 187 --------------------~r-----------------------~~~~----~------------~~------------ 195 (395)
T COG2807 187 --------------------LR-----------------------EQAA----S------------IA------------ 195 (395)
T ss_pred --------------------cc-----------------------cccc----c------------cc------------
Confidence 00 0000 0 00
Q ss_pred cchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhh
Q 008210 327 GAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGG 404 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~ 404 (574)
.+ .++-.+++|+|.-|.+.+.+.+.....+..+.|+|.++.++|++ +++.+++...+.+.+..+..
T Consensus 196 ---------~~---~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~ 263 (395)
T COG2807 196 ---------TK---LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLI 263 (395)
T ss_pred ---------cc---cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHH
Confidence 00 01113578899999999988888888888889999999999995 67889999999999999999
Q ss_pred hhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcC-ccchhhhhhhhh
Q 008210 405 GVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFG-LEHFGLISNFLA 483 (574)
Q Consensus 405 G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~ 483 (574)
.++.+|...+| ........++.++++.+.+.+....+...++.|++.|+.|+.....+..... ++..+.-.|+..
T Consensus 264 P~la~R~~n~r----~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQ 339 (395)
T COG2807 264 PLLARRSKNQR----PLVVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQ 339 (395)
T ss_pred HHHHHHhcccc----hHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhh
Confidence 99999854442 4455555666666666554332222333689999999999988877766653 455777778877
Q ss_pred hhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 484 LGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 484 ~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
..+.+-.. +||.++|++.|.+ ++|+..++....+.++..+..+
T Consensus 340 g~GYllAa-~GP~l~G~lhDa~--------------------gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 340 GVGYLLAA-FGPWLFGFLHDAT--------------------GSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred hhhHHHHh-hhhhhHhHHHHhc--------------------CChHHHHHHHHHHHHHHHHHHh
Confidence 77777777 8999999999997 4688888777766655544433
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.88 E-value=1.8e-20 Score=222.48 Aligned_cols=333 Identities=12% Similarity=0.051 Sum_probs=214.8
Q ss_pred cchHHHHhhhCCCHH--HHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 33 LYSHSLKSVLGFNQH--QLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 33 ~~~~~l~~~l~~s~~--~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
.+.+.+..+++.+.+ ..+++.+.+.++..+ ++++|+++||+|||++++++.++.+++.+++.++ ... .+++.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~--~~~--~~~~~l 106 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLA--YYL--GWFWLA 106 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHH--HHH--ccHHHH
Confidence 334455566666543 357766666676654 9999999999999999998887766665443322 111 257899
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC---------ChhHHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN---------SSSKLLLVLAVG 179 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~---------~~~~~~~~~~~~ 179 (574)
++.|++.|++.+...++...++.+++| ++|++++|+...+..+|.++++.+++.+... ..|.+.+.+..+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 999999999999999999999999998 6899999999999999998888888766432 011111110000
Q ss_pred -HHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccc
Q 008210 180 -VPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPV 258 (574)
Q Consensus 180 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (574)
..++.++..+ .++.
T Consensus 187 ~~~~~~~~~~~-----------------------------------------------------------------~~~~ 201 (1146)
T PRK08633 187 AVAVLGLIFAY-----------------------------------------------------------------RLPK 201 (1146)
T ss_pred HHHHHHHHHHh-----------------------------------------------------------------cCcC
Confidence 0000000000 0000
Q ss_pred cchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCC
Q 008210 259 KMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKR 338 (574)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (574)
.+++ .++. + +. +... ...
T Consensus 202 -------~~~~----------------------~~~~----~---------~~-~~~~-------------------~~~ 219 (1146)
T PRK08633 202 -------VPAA----------------------APEV----F---------DK-KKYL-------------------FPK 219 (1146)
T ss_pred -------CCCC----------------------Cccc----c---------cc-cccc-------------------cHH
Confidence 0000 0000 0 00 0000 000
Q ss_pred CCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc---hhhHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 008210 339 GEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH---DTTILLSLFSFCNFVGRLGGGVVSEHFVRK 414 (574)
Q Consensus 339 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r 414 (574)
.....++..++++.+|...+..++.+........+++.+.++ +|.+ ..+++.+...++.+++.++.|++.||++++
T Consensus 220 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~ 299 (1146)
T PRK08633 220 LLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL 299 (1146)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc
Confidence 001234556778888876665555444444445566776655 6774 346777888888999999999999998887
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHH
Q 008210 415 TIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLF 493 (574)
Q Consensus 415 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~ 493 (574)
..+.++.+.+.++++++... +...+++..++.|++.+...+....++.+..|++.+|.++|+.++...++.. +
T Consensus 300 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~-~ 373 (1146)
T PRK08633 300 -----GLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGML-L 373 (1146)
T ss_pred -----cchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHH-H
Confidence 34444555555555554433 3335556677888888888888888999999999999999999999999886 7
Q ss_pred hHhHHHhhh
Q 008210 494 SGLLAGYIY 502 (574)
Q Consensus 494 gp~l~g~l~ 502 (574)
++.+.+.+.
T Consensus 374 ~~~~~~~l~ 382 (1146)
T PRK08633 374 FLALTTLFS 382 (1146)
T ss_pred HHHHHHHHH
Confidence 775655543
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.88 E-value=1e-20 Score=224.09 Aligned_cols=327 Identities=15% Similarity=0.077 Sum_probs=214.8
Q ss_pred HHHhhhCCCHHH-HHHHHHHHHhhhh-ccccchhccccCCChHHHHH--HHHHHHHHHHHHHHHHhhccCChhHHHHHHH
Q 008210 37 SLKSVLGFNQHQ-LTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFI--GSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (574)
Q Consensus 37 ~l~~~l~~s~~~-~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~--g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (574)
.+.++.+.+... .++..+.+.+.+. ++++.|.++||+|||+++.. ...+......+ .+ ... ++++++++.
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~--~~---~~~-~s~~~l~~~ 114 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI--YG---FHL-NSVPLLFAA 114 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH--HH---HHH-hhHHHHHHH
Confidence 344444444334 5666666666654 59999999999999997533 21111111111 11 111 368999999
Q ss_pred HHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhc
Q 008210 113 LCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFV 191 (574)
Q Consensus 113 ~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (574)
|+++|++.++..++...++.+++| ++|++++|+..++.++|.+++|.+++.+....+|++.++...+..++.++..+.+
T Consensus 115 ~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 115 LFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999998 5899999999999999999999999988776666665533322222222211111
Q ss_pred ccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccc
Q 008210 192 RPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESG 271 (574)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (574)
++.+ +++.
T Consensus 195 ~~~~-----------------------------------------------------------------------~~~~- 202 (1140)
T PRK06814 195 PKTG-----------------------------------------------------------------------NAAP- 202 (1140)
T ss_pred CCCC-----------------------------------------------------------------------CCCC-
Confidence 1000 0000
Q ss_pred cccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhch
Q 008210 272 ILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKA 351 (574)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (574)
..+. + ... .......++...+++
T Consensus 203 --------------------~~~~---------------~-~~~---------------------~~~~~~~~~~~~~~~ 225 (1140)
T PRK06814 203 --------------------DLKI---------------D-RNI---------------------IRSTITLLKYAKADK 225 (1140)
T ss_pred --------------------CCee---------------c-cch---------------------HHHHHHHHHHHhcCc
Confidence 0000 0 000 000011346677888
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVI 428 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 428 (574)
.+|...+..++.......+..++|.|.++ +|.+ ..+++.+...++.++|.++.|+++|+..+++ .+..+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~-----~~~~~~~~ 300 (1140)
T PRK06814 226 RIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL-----YVPIGALL 300 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee-----eehHHHHH
Confidence 88888777666555444555677888876 5664 4677888999999999999999998766552 12222222
Q ss_pred HHHHHHHHHh---------------------cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhh
Q 008210 429 MIITYLLFAS---------------------SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNP 487 (574)
Q Consensus 429 ~~i~~~~~~~---------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 487 (574)
..++.+.+.. .+.+.+++..++.|++.+...+...+++++..|++.+|+++|+.++...
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~ 380 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNA 380 (1140)
T ss_pred HHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHH
Confidence 2222211111 2233455667788888888888888999999999999999999999999
Q ss_pred hHHHHHhHhHHHhhhhh
Q 008210 488 LAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 488 lg~~~~gp~l~g~l~~~ 504 (574)
++.. +++.+.|.+.+.
T Consensus 381 ~~~~-ig~~~~g~l~~~ 396 (1140)
T PRK06814 381 AFMV-AGTIILALLQAL 396 (1140)
T ss_pred HHHH-HHHHHHHHHHHh
Confidence 9988 899999998764
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.88 E-value=4.5e-20 Score=192.34 Aligned_cols=324 Identities=12% Similarity=0.043 Sum_probs=214.0
Q ss_pred hcchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCCh----HHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPW----LVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 32 ~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r----~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
..+.|.+.+++|.|..+++++.+.+.+... .+++.|.+.||+||| +.+.++.+..... .. ... +++
T Consensus 24 ~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-------~~-~~~-~~~ 94 (382)
T PRK11128 24 LPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVA-------FW-FGA-HSF 94 (382)
T ss_pred hhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHH-------HH-Hhc-ccH
Confidence 344556678899999999997666666655 599999999999984 3332222221111 11 112 368
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLV 186 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (574)
|.+++.|++.|++.+...+....++.+| .++|+++.+.......+|.+++|++.+.+.+..+|+..++......++..+
T Consensus 95 ~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~ 173 (382)
T PRK11128 95 WLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL 173 (382)
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 9999999999999887777666666655 667888888888888899999999998886655666554433221111110
Q ss_pred HHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccC
Q 008210 187 MMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKR 266 (574)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (574)
... . .+ +
T Consensus 174 ~~~-~----------------------------------------------------------------~~--------~ 180 (382)
T PRK11128 174 GQL-L----------------------------------------------------------------RP--------T 180 (382)
T ss_pred HHH-c----------------------------------------------------------------cC--------C
Confidence 000 0 00 0
Q ss_pred CcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHH
Q 008210 267 TSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTE 346 (574)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (574)
++ +++. ++ ++ ++ +...++++
T Consensus 181 ~~-----------------------~~~~-----------------~~-----------------~~--~~-~~~~~~~~ 200 (382)
T PRK11128 181 IM-----------------------PQGE-----------------SR-----------------QQ--ES-AGWPAWKA 200 (382)
T ss_pred CC-----------------------Cccc-----------------cc-----------------cc--cc-cccchHHH
Confidence 00 0000 00 00 00 01124578
Q ss_pred hhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHH
Q 008210 347 AVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTC 424 (574)
Q Consensus 347 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~ 424 (574)
.+|+|.+|...+..++..........+.+.+.++.|.+ +.+...+...+...+..+..|++.||+++| ..+..
T Consensus 201 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~ 275 (382)
T PRK11128 201 LLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLL 275 (382)
T ss_pred HHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHH
Confidence 89999999877766655444444556667777777875 456677777788888999999999999988 55666
Q ss_pred HHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhh-hhhhhHHHHHhHhHHHhhh
Q 008210 425 TQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLA-LGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 425 ~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~lg~~~~gp~l~g~l~ 502 (574)
+.+...++..++... +.+..++..++.|++.+...+....+..+. +++++++..++.+ ....+|.. +||.+.|.++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-ig~~i~G~l~ 353 (382)
T PRK11128 276 SAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIA-IMTVLSGFLY 353 (382)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 667767666655533 344566677788888887777777777776 5566788899876 44556666 8999999999
Q ss_pred hhh
Q 008210 503 DNE 505 (574)
Q Consensus 503 ~~~ 505 (574)
|..
T Consensus 354 ~~~ 356 (382)
T PRK11128 354 QHL 356 (382)
T ss_pred Hhc
Confidence 984
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.88 E-value=4.6e-20 Score=193.25 Aligned_cols=358 Identities=13% Similarity=0.074 Sum_probs=217.0
Q ss_pred cchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHH-HhhccCChhHHHHH
Q 008210 33 LYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLA-VSRTVESLPYWLLW 110 (574)
Q Consensus 33 ~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~~~l~ 110 (574)
.+.+++++++|++..+.+++.+...+... .+++.|+++||+|||+.+..+.+..+++....... ..........+.++
T Consensus 24 ~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 24 FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33445677899999999996666666655 59999999999999999988776665543322111 11000001223345
Q ss_pred HHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHh
Q 008210 111 IALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYF 190 (574)
Q Consensus 111 ~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (574)
+.+++.|++.+...+....+..+. .++++...|......++|.++++.+.+.+.. .+|+..+.......++..+..+.
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 104 VGGLYLGFVFSAGAGAIEAYIEKV-SRNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHHHHHHHHhccchhhHHHHHHHh-hhhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHH
Confidence 568888887776665554444442 3445566777777778888888888765533 34555554433322222211111
Q ss_pred cccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCccc
Q 008210 191 VRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSES 270 (574)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (574)
..+. ++++
T Consensus 182 ~~~~------------------------------------------------------------------------~~~~ 189 (396)
T TIGR00882 182 AKPK------------------------------------------------------------------------APSS 189 (396)
T ss_pred hCCC------------------------------------------------------------------------Cchh
Confidence 1000 0000
Q ss_pred ccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhc
Q 008210 271 GILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVK 350 (574)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (574)
+. .++. .+ . + ++..+..+.++.+|+
T Consensus 190 ~~-------------------~~~~-----------------~~--------------~--~---~~~~~~~~~~~~l~~ 214 (396)
T TIGR00882 190 AT-------------------VANA-----------------LG--------------A--N---ASAFSLKLALELFRQ 214 (396)
T ss_pred hh-------------------hhcc-----------------cc--------------c--c---cCCCCHHHHHHHHcC
Confidence 00 0000 00 0 0 000011245788899
Q ss_pred hhHHHHHHHHHhhcccceeeeccHHHHHHhh----CCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHH
Q 008210 351 ADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ----GVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTC 424 (574)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~ 424 (574)
|.+|.+....++..........+.+.+.++. +.+ ..+...+...+...++.+..|++.||+|+| ..+.+
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~ 289 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLI 289 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHH
Confidence 9888765554443322222333455565542 222 345667777788888999999999999999 45555
Q ss_pred HHHHHHHHHHHHHh-cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhh-hhhhhhhHHHHHhHhHHHhhh
Q 008210 425 TQVIMIITYLLFAS-SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNF-LALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 425 ~~~~~~i~~~~~~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~lg~~~~gp~l~g~l~ 502 (574)
+.++..++..+... .+...+++...+.|++..........+..+..+++.+++..+. .+....+|+. ++|.+.|++.
T Consensus 290 ~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~-~~~~l~G~l~ 368 (396)
T TIGR00882 290 AGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMI-FLSTLAGNMY 368 (396)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHH-HHHHhHHHHH
Confidence 55666666555443 3444555566677776655444455567777888888887766 5678899998 8999999999
Q ss_pred hhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 503 DNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
|.. +|+.+|.+.+++.++..+..
T Consensus 369 ~~~---------------------G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 369 DSI---------------------GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred Hhc---------------------ccHHHHHHHHHHHHHHHHHH
Confidence 983 58899998888776665554
No 82
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=5.3e-20 Score=193.58 Aligned_cols=329 Identities=16% Similarity=0.095 Sum_probs=206.8
Q ss_pred HHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 008210 38 LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (574)
Q Consensus 38 l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (574)
+++|.+....+.+++.+.+.+++++ .+|+|.|.||++..+.+....+..++-.++ +.+. .+++.+++.|++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~-----~~~~--~s~~~~ialr~ll 144 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFL-----TAAV--HSFPGLIALRFLL 144 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHH-----HHHH--hhhHHHHHHHHHH
Confidence 5689999999999988888888866 999999999999666655544443333211 2222 4799999999999
Q ss_pred HhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhcc------CChhHHHHHHHHHHHHH-HHHHH
Q 008210 117 TNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH------NSSSKLLLVLAVGVPAV-CLVMM 188 (574)
Q Consensus 117 G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~------~~~~~~~~~~~~~~~~~-~~~~~ 188 (574)
|+.++..+|+...++..||. ++||+.+|++.+..++|+++++.+...+.. ..+|+|.+++.....++ ++++.
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 99999999999999999997 589999999999999999999999988642 23566655543322222 22222
Q ss_pred HhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCc
Q 008210 189 YFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTS 268 (574)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (574)
++++..|..- + ...++
T Consensus 225 ~~lp~~P~~~-------~-------------------------------------------------------fl~~~-- 240 (495)
T KOG2533|consen 225 FFLPDNPSKA-------W-------------------------------------------------------FLTDE-- 240 (495)
T ss_pred EEecCChhhc-------c-------------------------------------------------------ccchH--
Confidence 2222111100 0 00000
Q ss_pred ccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhh
Q 008210 269 ESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAV 348 (574)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (574)
|+.-..++.+++..+.. .+..+...+++++
T Consensus 241 --------------------------------------------ek~~~~~~~~~~~~~~~------~~~~~~~~~~~a~ 270 (495)
T KOG2533|consen 241 --------------------------------------------EKELVVERLRESPSGGI------ENKFKWKGFKEAL 270 (495)
T ss_pred --------------------------------------------HHHHHHHHHHhccCCCc------ccccCHHHHHHHH
Confidence 00000000000000000 0112346778999
Q ss_pred hchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhh----hhccccCchhh
Q 008210 349 VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEH----FVRKTIPRTIW 421 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr----~g~r~~~~~~~ 421 (574)
++|..|.+.++.++.......+.+++|.+.++ .|++ ++..+..++.++++++.++.|+++|| ..+| ...
T Consensus 271 ~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~----~~~ 346 (495)
T KOG2533|consen 271 KDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARR----LLF 346 (495)
T ss_pred hchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHH----HHH
Confidence 99999999999999988888889999999988 4564 45667788999999999999999999 4444 123
Q ss_pred HHHHHHHHHHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccc-hhhhhhhhhhhhhhHHH
Q 008210 422 MTCTQVIMIITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEH-FGLISNFLALGNPLAAF 491 (574)
Q Consensus 422 ~~~~~~~~~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~lg~~ 491 (574)
.....+...++...+...+ .............+.+...+......++....+. +-+..+....+.+.++.
T Consensus 347 ~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~ 418 (495)
T KOG2533|consen 347 IVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGA 418 (495)
T ss_pred HHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHH
Confidence 3333444555544433332 2233322222233344444555555555554333 33333344445555554
No 83
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.86 E-value=1.6e-19 Score=195.19 Aligned_cols=379 Identities=16% Similarity=0.101 Sum_probs=246.1
Q ss_pred HHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhh
Q 008210 47 HQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGT 125 (574)
Q Consensus 47 ~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~ 125 (574)
.+.+|+.+...++..+ +++.|+++|++|||++++++.+++.+|++++..+ +++++++++|+++|+|.|+...
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------~~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------PSWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHhccchhhhhh
Confidence 4568988888888765 9999999999999999999999999998886554 3789999999999999999998
Q ss_pred HHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC--ChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 008210 126 AVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN--SSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDS 202 (574)
Q Consensus 126 ~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (574)
....++++.-| +.||...+.......+|..++ .+.+....+ .+||..+.++.+|.++..++.+++++.|++.-++.
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g 240 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG 240 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC
Confidence 89999999999 489999999999888766555 555555444 37999999999999998888777765554422210
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcc
Q 008210 203 AAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDS 282 (574)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (574)
.... ..... .. ++..+
T Consensus 241 ~~~~---a~~~l---------~~------------------------------------l~g~~---------------- 256 (513)
T KOG0254|consen 241 RLEE---AKRSL---------KR------------------------------------LRGLS---------------- 256 (513)
T ss_pred ChHH---HHHHH---------HH------------------------------------HhCCC----------------
Confidence 0000 00000 00 00000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHH----hhhchhHHHHHH
Q 008210 283 VVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTE----AVVKADFWLLFL 358 (574)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~ 358 (574)
+. +...+.+..+.+...+. .. .+ .+..+.+ ..+++.++...+
T Consensus 257 -----------~~-----------------~~~~~~~~~~~~~~~~~--~~--~~--~~~~~~~l~~~~~~~~~~i~~~l 302 (513)
T KOG0254|consen 257 -----------PE-----------------DVEVELELLKIKLLVEA--EV--AE--GKASWGELFSPKVRKRLIIGLLL 302 (513)
T ss_pred -----------Cc-----------------chHHHHHHHHHHHHHhh--hc--cc--ccccHHHhcCcchHHHHHHHHHH
Confidence 00 00001111110000000 00 00 0001112 234445555666
Q ss_pred HHHhhcccceeeeccHHHHHHhhCCchh-hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH
Q 008210 359 VYFAGVGSGVTVLNNLAQIGIAQGVHDT-TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA 437 (574)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~ 437 (574)
..+....+.....+|.+++++..|.++. .....+.++.+.++..++..+.||+||| .+++.+...+.++++++.
T Consensus 303 ~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~ 377 (513)
T KOG0254|consen 303 QLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILA 377 (513)
T ss_pred HHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHH
Confidence 6666666667788899999999888543 5566677888889999999999999999 788888888888887765
Q ss_pred hc-----C----c----hHHHHHHHH-HhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 438 SS-----I----D----GTLYAATAL-LGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 438 ~~-----~----~----~~l~~~~~l-~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
.. . . ...++...+ ......+..++...+.+|++|.+.|+.+.++....+.+.++++ ...+-.+.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~ 456 (513)
T KOG0254|consen 378 VVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITE 456 (513)
T ss_pred HHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 21 1 0 111222222 2222333345556789999999999999999999888888744 223333322
Q ss_pred hhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHH-HHHHHhhhhhhhHH
Q 008210 504 NEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSI-LSIILNIRIRPVYQ 558 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 558 (574)
.. +....|....+.+.+... .+++..+|+|.+..
T Consensus 457 ~~---------------------~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 457 AL---------------------GIGGTFGYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred hc---------------------cccchHHHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 21 123455555555556555 56667788776554
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.86 E-value=4.4e-19 Score=186.16 Aligned_cols=356 Identities=12% Similarity=0.083 Sum_probs=213.5
Q ss_pred Hhhhccch-hhcchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccC-----CChH-HHHHHHHHHHHHHHHHHH
Q 008210 23 IAAGNAYN-FPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKF-----PPWL-VLFIGSLACFFGYGVLWL 95 (574)
Q Consensus 23 ~~~g~~~~-~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~-----G~r~-~~~~g~~~~~~g~~~~~~ 95 (574)
+..|..+. .....|.+-++.|++.+|++++...... .++.+++|+++||+ |||| .+.++.+.++++...+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~ 87 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF 87 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 33455333 2334566667789999999998665544 46699999999999 8776 677777777766544322
Q ss_pred HHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC-ChhHHH
Q 008210 96 AVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLL 173 (574)
Q Consensus 96 ~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~-~~~~~~ 173 (574)
. . +..+++.+++..++.++..+...++...++.+++| ++|+++.++...++++|..+++.+...+.+. .+|+..
T Consensus 88 ~--~--~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~ 163 (402)
T PRK11902 88 C--P--PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNT 163 (402)
T ss_pred c--C--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHH
Confidence 2 1 12357778878888888888888888999999998 4699999999999999999998888776553 356665
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhh
Q 008210 174 LVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAP 253 (574)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (574)
+++..+..++..+..+..+
T Consensus 164 f~i~a~~~l~~~l~~~~~~------------------------------------------------------------- 182 (402)
T PRK11902 164 YLLMAGLMLAGALTTLWAP------------------------------------------------------------- 182 (402)
T ss_pred HHHHHHHHHHHHHHHHhcC-------------------------------------------------------------
Confidence 5543332222111111100
Q ss_pred hcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhc
Q 008210 254 LAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKK 333 (574)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (574)
++++. ++++ ++. +
T Consensus 183 ------------e~~~~---------------------~~~~-----------------~~~----------------~- 195 (402)
T PRK11902 183 ------------EPEVP---------------------ARPP-----------------RSL----------------G- 195 (402)
T ss_pred ------------CCccc---------------------cccc-----------------chh----------------H-
Confidence 00000 0000 000 0
Q ss_pred cCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeee-ccHHHHHHhhCCch--hhHHHHHHH-HHHhhhhhhhhhhhh
Q 008210 334 RRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVL-NNLAQIGIAQGVHD--TTILLSLFS-FCNFVGRLGGGVVSE 409 (574)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~-i~~~ig~~~~G~l~D 409 (574)
......+++.+|+|.+|......++......... ...+.+.++.|+++ .++.....+ ++..++.+++|++.|
T Consensus 196 ----~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~ 271 (402)
T PRK11902 196 ----EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMV 271 (402)
T ss_pred ----HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 0001234678888888876665444322222111 22333445578754 344544443 458899999999999
Q ss_pred hhhccccCchhhHHHHHHHHHHHHH---HHHh-cCc-hHHHHHHH----HHhhhccchhhhHHHHHHhhcCccchhhhhh
Q 008210 410 HFVRKTIPRTIWMTCTQVIMIITYL---LFAS-SID-GTLYAATA----LLGICYGVQFSIMIPTVSELFGLEHFGLISN 480 (574)
Q Consensus 410 r~g~r~~~~~~~~~~~~~~~~i~~~---~~~~-~~~-~~l~~~~~----l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g 480 (574)
|+++| ..+..+.....+..+ ++.. .+. ..+++... +.|++.+...+....++++.+|.+++ +
T Consensus 272 r~g~~-----~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~ 342 (402)
T PRK11902 272 RLGLY-----RSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----A 342 (402)
T ss_pred HHhHH-----HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----H
Confidence 99988 333333333333222 2222 222 23333333 33444555556666677777765554 5
Q ss_pred hhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 481 FLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 481 ~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
+.+....++.. .++.+.|.+.|.. +|+..|.+.+.++++++++.
T Consensus 343 ~~~~~~~l~~~-~~~~~~G~l~~~~---------------------G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 343 LLSALASVGRV-YVGPTSGYLVEAY---------------------GWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHh---------------------ChHHHHHHHHHHHHHHHHHH
Confidence 55555567776 4455899999984 58888888877777765543
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.86 E-value=9.8e-20 Score=187.85 Aligned_cols=316 Identities=10% Similarity=-0.031 Sum_probs=200.3
Q ss_pred hhcchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccC-----CChHHH-HHHHHHHHHHHHHHHHHHhhccCCh
Q 008210 31 FPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKF-----PPWLVL-FIGSLACFFGYGVLWLAVSRTVESL 104 (574)
Q Consensus 31 ~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~-----G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~~~ 104 (574)
.....|.+.+|+|+|.+|+++.+....... +.++.|.+.||+ ||||.+ +.+.++.++....+.+. .+..
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~----~~~~ 81 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL----VPST 81 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC----Ccch
Confidence 445668889999999999999765543333 499999999998 898874 55666666553332211 1123
Q ss_pred hHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCCh--------hHHHHH
Q 008210 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSS--------SKLLLV 175 (574)
Q Consensus 105 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~--------~~~~~~ 175 (574)
+.+.+....++.+++.+...++...++.+++| |+|+++.++...+..+|.++++.+...+..... |+..++
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 46667777888888888888888889999997 689999999999999999988888876644322 444443
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhc
Q 008210 176 LAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLA 255 (574)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (574)
+..+..++.++..++.
T Consensus 162 i~ai~~l~~~~~~~~~---------------------------------------------------------------- 177 (356)
T TIGR00901 162 WTALLILPGLLVTLFL---------------------------------------------------------------- 177 (356)
T ss_pred HHHHHHHHHHHHHHHh----------------------------------------------------------------
Confidence 3332222211111100
Q ss_pred ccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccC
Q 008210 256 IPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRR 335 (574)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (574)
. ++++ ++++ +++++ ++
T Consensus 178 --~-------~e~~----------------------~~~~-----------------~~~~~--------------~~-- 193 (356)
T TIGR00901 178 --A-------KEPQ----------------------EDAS-----------------VPKPL--------------TQ-- 193 (356)
T ss_pred --c-------cCCC----------------------cccc-----------------cchhH--------------HH--
Confidence 0 0000 0000 00000 00
Q ss_pred CCCCCCccHHHhhhchh---HHHHHHHHHhhcccceeeeccHHHHHHhhCCch--hhHHHHHHH-HHHhhhhhhhhhhhh
Q 008210 336 PKRGEDFKFTEAVVKAD---FWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHD--TTILLSLFS-FCNFVGRLGGGVVSE 409 (574)
Q Consensus 336 ~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~-i~~~ig~~~~G~l~D 409 (574)
+ ....+++.++++. ++...+..++..........+.+.+.+++|++. .+......+ +...++.+++|++.|
T Consensus 194 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~ 270 (356)
T TIGR00901 194 A---VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQ 270 (356)
T ss_pred H---HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 0 0012345566654 565555554444444445567788887788753 344444444 567899999999999
Q ss_pred hhhccccCchhhHHHHHHHHHHHHHHHHh---c--------Cc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhh
Q 008210 410 HFVRKTIPRTIWMTCTQVIMIITYLLFAS---S--------ID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGL 477 (574)
Q Consensus 410 r~g~r~~~~~~~~~~~~~~~~i~~~~~~~---~--------~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~ 477 (574)
|+|+| ..+..+.++..++..+... . +. ..+.....+.+++.+...+....+++|.+|++++|+
T Consensus 271 r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~ 345 (356)
T TIGR00901 271 PLNIL-----YALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGAT 345 (356)
T ss_pred hhhHH-----HHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHH
Confidence 99988 3444444444444443221 1 11 234445566688889999999999999999999999
Q ss_pred hhhhhhhhhh
Q 008210 478 ISNFLALGNP 487 (574)
Q Consensus 478 ~~g~~~~~~~ 487 (574)
.+|+.+...+
T Consensus 346 ~~g~~~~~~~ 355 (356)
T TIGR00901 346 QMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHh
Confidence 9999877654
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.85 E-value=4.2e-19 Score=188.41 Aligned_cols=334 Identities=14% Similarity=0.077 Sum_probs=204.0
Q ss_pred chHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhcccc----CCC-hHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 008210 34 YSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNK----FPP-WLVLFIGSLACFFGYGVLWLAVSRTVESLPYW 107 (574)
Q Consensus 34 ~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr----~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 107 (574)
+.+.+.+++|++..+++++.+...+.. +..|+.|.++|| +|| |+.++++.+.+.++.++++... ........+
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP-DFSATGKLV 100 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC-CCCcchHHH
Confidence 456678889999999999666555555 559999999998 676 4467778888877765543321 111111245
Q ss_pred HHHHHHHHHHhhhHhhhhHHHHHHHhhC-C-CCcchHHHHHHhhhhhHHHHHHHHHHHhcc-------CChhHHHHHHHH
Q 008210 108 LLWIALCVATNSSAWLGTAVLVTNMRNF-P-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH-------NSSSKLLLVLAV 178 (574)
Q Consensus 108 ~l~~~~~l~G~g~g~~~~~~~~~~~~~f-p-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~-------~~~~~~~~~~~~ 178 (574)
.+++.+++.+++.+....+......+.. + ++|+++.++...+..+|..+.+.+...+.. ...|++.+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 5666788888888877666666666766 3 689999998888777776665544433211 011221111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccc
Q 008210 179 GVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPV 258 (574)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (574)
+..++.. .......
T Consensus 181 ~l~~~~~------------------------------------------------------------------~~~~~~~ 194 (437)
T TIGR00792 181 LIGVVSL------------------------------------------------------------------IICFFGT 194 (437)
T ss_pred HHHHHHH------------------------------------------------------------------HHHHcCC
Confidence 0000000 0000000
Q ss_pred cchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCC
Q 008210 259 KMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKR 338 (574)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (574)
+ ++++ +++ + + ++ ++.
T Consensus 195 ~-------e~~~----------------------~~~----~------------~------------------~~--~~~ 209 (437)
T TIGR00792 195 K-------ERYS----------------------EIP----K------------N------------------IE--KKL 209 (437)
T ss_pred E-------ecCC----------------------CCC----c------------c------------------cc--cCC
Confidence 0 0000 000 0 0 00 000
Q ss_pred CCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCC-chhhHHHHHHHHHHhhhhhhhhhhhhhhhcccc
Q 008210 339 GEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGV-HDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTI 416 (574)
Q Consensus 339 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~ 416 (574)
.....+++.+++|.++......++............+.+.+. .+. ...+...+...++.+++.++++++.||+|+|
T Consensus 210 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-- 287 (437)
T TIGR00792 210 SLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-- 287 (437)
T ss_pred CHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--
Confidence 011234567888988877666655444333222223333332 232 2344566677889999999999999999988
Q ss_pred CchhhHHHHHHHHHHHHHHHHhc-C-chHHHHHHHHHhhhccchhhhHHHHHHhhcC-------ccchhhhhhhhhhhhh
Q 008210 417 PRTIWMTCTQVIMIITYLLFASS-I-DGTLYAATALLGICYGVQFSIMIPTVSELFG-------LEHFGLISNFLALGNP 487 (574)
Q Consensus 417 ~~~~~~~~~~~~~~i~~~~~~~~-~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~ 487 (574)
..+..+..+..++.+.+... + ....++...+.|++.+...+...++++|..+ ++..|..+|+.++...
T Consensus 288 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 364 (437)
T TIGR00792 288 ---ILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRK 364 (437)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHH
Confidence 55566666666666555432 2 2344556677788888888888888888754 5678999999999999
Q ss_pred hHHHHHhHhHHHhhhhhh
Q 008210 488 LAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 488 lg~~~~gp~l~g~l~~~~ 505 (574)
++.. +++.+.|.+.|..
T Consensus 365 ~g~~-lg~~i~g~ll~~~ 381 (437)
T TIGR00792 365 LGQA-LAGFLVGLILGII 381 (437)
T ss_pred HHHH-HHHHHHHHHHHHc
Confidence 9998 8999999998874
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.85 E-value=6.2e-18 Score=180.70 Aligned_cols=405 Identities=12% Similarity=0.026 Sum_probs=238.8
Q ss_pred chHHHHhh--hCCCHHHHHHHHHHHHhhh-hccccchhcccc-CCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 34 YSHSLKSV--LGFNQHQLTMLGVANDIGE-NVGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 34 ~~~~l~~~--l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
+..+++++ +|++..+.+++...+..+. +..++.|+++|| +|||+++.++.++..++++++.+. ++++.+
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~-------~~~~~~ 105 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS-------IYPDLI 105 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-------ccHhHH
Confidence 33445666 9999999999655555544 559999999999 899999999999999997664322 246778
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCCC----CcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFPL----SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp~----~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
++.+++.|+|.|...+.....+++++|+ +|+++.++...+.++|.++++.+.+.+.+..+|++.+....+..+++.
T Consensus 106 ~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 106 FYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL 185 (475)
T ss_pred HHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 8899999999999888888999999973 388899999999999999999998888776678877776665444444
Q ss_pred HHHHhcccC-CCCCCCC---CCCCcchhhHHHH--HHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhccccc
Q 008210 186 VMMYFVRPC-TPASGED---SAAPSHFLFTQAA--SVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVK 259 (574)
Q Consensus 186 ~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (574)
+...+.++. ++.+.++ ++++......... .....++....... + ....+.. .....+...+....
T Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~---~~~~~~~~~~~~~~- 256 (475)
T TIGR00924 186 LTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMH----H-VVIANIL---LMTVTLAVIIFFFR- 256 (475)
T ss_pred HHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHh----c-cHHHHHH---HHHHHHHHHHHHHH-
Confidence 444333321 1111000 0011111000000 00000000000000 0 0000000 00000111100000
Q ss_pred chhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCC
Q 008210 260 MTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRG 339 (574)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (574)
. ..+ ++
T Consensus 257 ---~----------------------------~~~-----------------------------------------~~-- 262 (475)
T TIGR00924 257 ---L----------------------------AFK-----------------------------------------PR-- 262 (475)
T ss_pred ---H----------------------------HHh-----------------------------------------cc--
Confidence 0 000 00
Q ss_pred CCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCC-----c-hhhHHHHHHHHHHhhhhhhhhhhhhhhh
Q 008210 340 EDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGV-----H-DTTILLSLFSFCNFVGRLGGGVVSEHFV 412 (574)
Q Consensus 340 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-----~-~~~~~~~~~~i~~~ig~~~~G~l~Dr~g 412 (574)
.+..+..|...+..+++...+.+.......+.++.+.++ .+. + +.+++.+...+.-++..+...++..|+.
T Consensus 263 --~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~ 340 (475)
T TIGR00924 263 --LDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLG 340 (475)
T ss_pred --CCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 000011122233334444333333333344445555443 222 1 3556777777777777666666555666
Q ss_pred cccc--CchhhHHHHHHHHHHHHHHHHh----------cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhh
Q 008210 413 RKTI--PRTIWMTCTQVIMIITYLLFAS----------SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISN 480 (574)
Q Consensus 413 ~r~~--~~~~~~~~~~~~~~i~~~~~~~----------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g 480 (574)
||.. +...-+.++.++.++++..+.. .+.+.+.+..++.++|-....|.....+.+..|++.+|..+|
T Consensus 341 ~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g 420 (475)
T TIGR00924 341 RKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLG 420 (475)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHH
Confidence 6422 2222246677777777766542 133467788899999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 481 FLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 481 ~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+......+|.. +++.+.....+. .++...|...++.++++.++.+++.++
T Consensus 421 ~~~l~~~~g~~-l~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 421 MWFLAQAMGSL-LGGYLATFGAVP---------------------QGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhcc---------------------cchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888887 777676665544 235555666665555555555444443
No 88
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=2.1e-19 Score=174.00 Aligned_cols=420 Identities=13% Similarity=0.028 Sum_probs=252.3
Q ss_pred cCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHH
Q 008210 9 RPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 9 ~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
+++|-....+..--+...+ ......+.|.+.+..+.+.-|.+.+......++++ +..+|.++|++|||+.+.+..+..
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 4555554333322222222 44555667888888999999999998888899977 999999999999999887766654
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
++.-.+ +++ +++|..+++.|.+-|+|.|. ++....+-.+.-| .+|++-+=.. ..+.+|.+....+.....
T Consensus 154 ~v~~~i-----s~~--spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm 224 (528)
T KOG0253|consen 154 GVFGVI-----SGA--SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVM 224 (528)
T ss_pred HHHHHh-----hcC--CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHH
Confidence 443111 333 35788999999999999998 5666666666668 4777654444 788899888888877777
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHH
Q 008210 166 HNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFI 245 (574)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (574)
.+.+|||+.+....|..+...+.+++.+.|+..-.+.+......-+.-+
T Consensus 225 ~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~ki------------------------------- 273 (528)
T KOG0253|consen 225 SNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKI------------------------------- 273 (528)
T ss_pred HhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHH-------------------------------
Confidence 7779999988888888888888888888876543221111100000000
Q ss_pred HHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhh
Q 008210 246 MIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEG 325 (574)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (574)
.++++. +-|+-...+ +..+++++|+.+.
T Consensus 274 ----------------ArmNg~-------------------------qlplgvl~~-----------s~~~~~e~e~~~~ 301 (528)
T KOG0253|consen 274 ----------------ARMNGK-------------------------QLPLGVLES-----------SAIDRQEQEESDL 301 (528)
T ss_pred ----------------HHhcCC-------------------------CCCcceeee-----------ehhhhhhhhhhch
Confidence 011110 001000000 0000000010000
Q ss_pred ccchhhhccCCCCCCCccHHHh----hhchh--HHHHHHHHHhhcccceeeecc-----------------HHHHHHhh-
Q 008210 326 EGAVRRKKRRPKRGEDFKFTEA----VVKAD--FWLLFLVYFAGVGSGVTVLNN-----------------LAQIGIAQ- 381 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~----l~~~~--~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~- 381 (574)
++.+ .+..++.. ....++ ++..+ .|..++.... .....+.. .|+..+..
T Consensus 302 ~~~~--~~a~ke~r--g~~~nLlsp~lrkttlllw~iwfgnaf---syyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~ 374 (528)
T KOG0253|consen 302 DDSK--SSAAKEVR--GGTTNLLSPKLRKTTLLLWRIWFGNAF---SYYGSVLLTTELFQSGDACPLYNRFLPTELETRA 374 (528)
T ss_pred hhhh--hccccccc--cchHhhcChHHHHHHHHHHHHHHhhHH---HHHHHHHHHHHHHhccCccccchhcchhHHHhhh
Confidence 0000 00000000 001111 12111 2322222211 11111111 22222220
Q ss_pred C--C-c-hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhcc
Q 008210 382 G--V-H-DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYG 456 (574)
Q Consensus 382 g--~-~-~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g 456 (574)
+ . . ....=+.+...+.+.|.++.+++.||+||| ..+..+.++..+..+++... ++....+..+..-++..
T Consensus 375 ~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK-----kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis 449 (528)
T KOG0253|consen 375 NCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK-----KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS 449 (528)
T ss_pred cCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh
Confidence 0 0 1 111223467788999999999999999999 67777777777777665543 23333333334445667
Q ss_pred chhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHH
Q 008210 457 VQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLA 536 (574)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (574)
+.|...+++..|++|++.|+++.|....++.+|+. +.|.++ ...+.. -..+..+.+
T Consensus 450 g~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI-~~p~iA-~~~e~s----------------------~sl~i~vy~ 505 (528)
T KOG0253|consen 450 GAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGI-FSPVIA-MRAELS----------------------TSLPIFVYG 505 (528)
T ss_pred chheEEEEecCcccchhhhhcchhhhhhHHhhhhh-hhhHHH-HHhccc----------------------eeehHHHHH
Confidence 77888889999999999999999999999999997 899877 333331 344566778
Q ss_pred HHHHHHHHHHHHHhhhhhhh
Q 008210 537 GVCCVGSILSIILNIRIRPV 556 (574)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~ 556 (574)
++++++.+.++++..++|.+
T Consensus 506 ~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 506 ALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred HHHHHHHHHheeeeeccCCC
Confidence 88888888888888887764
No 89
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.4e-20 Score=187.79 Aligned_cols=388 Identities=13% Similarity=0.018 Sum_probs=232.6
Q ss_pred CCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHh
Q 008210 44 FNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAW 122 (574)
Q Consensus 44 ~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~ 122 (574)
++....+.+....++|.++ |+++|++.||+|||+++....+++.++++.+++......+..-++.++++|++.|+|.|.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 3445556688888999987 999999999999999999999999999875443322222211267788899999999999
Q ss_pred hhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHh---cc----C--------ChhHHHHHHHHHHHHHHHH
Q 008210 123 LGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML---LH----N--------SSSKLLLVLAVGVPAVCLV 186 (574)
Q Consensus 123 ~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l---~~----~--------~~~~~~~~~~~~~~~~~~~ 186 (574)
-||.+..++++.-- ++||.-.+.+.+..+.|...++.+...+ +. . .-||..+.++++|++....
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly 240 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY 240 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986 6899988888777776654444443322 11 1 1367777777766666555
Q ss_pred HHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccC
Q 008210 187 MMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKR 266 (574)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (574)
..+.+++..++...
T Consensus 241 ~Rl~M~Et~~Y~al------------------------------------------------------------------ 254 (538)
T KOG0252|consen 241 FRLKMPETARYTAL------------------------------------------------------------------ 254 (538)
T ss_pred hhhcCCcchhHHHH------------------------------------------------------------------
Confidence 54444322211100
Q ss_pred CcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHH
Q 008210 267 TSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTE 346 (574)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (574)
.+ .+++++.++...+.+ .+ ..++++.+. ..+ ++.+....+.+
T Consensus 255 -----------~~-~~~~~a~~d~~k~~~--------------------~~---~~~~~~~~~--~~~-~~~~~~~~F~~ 296 (538)
T KOG0252|consen 255 -----------VS-KKLKQAAGDMKKVLS--------------------VD---IEAESTAES--DVP-PPSNSFGLFSR 296 (538)
T ss_pred -----------hh-cCHhhhhhccccccc--------------------cc---cchhhcccc--CCC-CcccccchHHH
Confidence 00 000000000000000 00 000000000 000 11111111222
Q ss_pred hhhch---hHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--h--------hhHHHHHHHH-HHhhhhhhhhhhhhhhh
Q 008210 347 AVVKA---DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--D--------TTILLSLFSF-CNFVGRLGGGVVSEHFV 412 (574)
Q Consensus 347 ~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~--------~~~~~~~~~i-~~~ig~~~~G~l~Dr~g 412 (574)
.+..+ .........|..-.+.+..-.+...+++..|+. . .+....+... ..+.|..++..++|++|
T Consensus 297 ~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG 376 (538)
T KOG0252|consen 297 LFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG 376 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh
Confidence 22222 122222233333333333444566777776662 1 1112223333 34458889999999999
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHHhc-C----chHHHHHHHHHh-hhccchhhhHHHHHHhhcCccchhhhhhhhhhhh
Q 008210 413 RKTIPRTIWMTCTQVIMIITYLLFASS-I----DGTLYAATALLG-ICYGVQFSIMIPTVSELFGLEHFGLISNFLALGN 486 (574)
Q Consensus 413 ~r~~~~~~~~~~~~~~~~i~~~~~~~~-~----~~~l~~~~~l~g-~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 486 (574)
|| +..+.+.+++++.++.+..+ + .....+...+.. ++.-+...++..+.+|.||++.||+.+|+..+.+
T Consensus 377 Rk-----~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~G 451 (538)
T KOG0252|consen 377 RK-----YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASG 451 (538)
T ss_pred hH-----HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhc
Confidence 99 77888888888877776632 1 112333333333 3333444566678999999999999999999999
Q ss_pred hhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 008210 487 PLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIRPVYQ 558 (574)
Q Consensus 487 ~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (574)
-.|+. +|...+.++.++.-... .+++..|++.+++++++.+..+++. |++++..
T Consensus 452 K~GAi-vg~~~F~~~t~~~yp~~----------------~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~l 505 (538)
T KOG0252|consen 452 KAGAI-VGAFGFLYLTDHNYPPN----------------IGVRNVFIILAGCMLLGILFTLLIP-ETKGKSL 505 (538)
T ss_pred cchHH-HHHHHhhHhhhccCCcc----------------ccchHHHHHHHHHHHHhHheeEEee-cccccCH
Confidence 99997 89888888887531111 3589999999999999988776555 6554433
No 90
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.84 E-value=7e-21 Score=190.88 Aligned_cols=149 Identities=12% Similarity=0.098 Sum_probs=126.0
Q ss_pred ccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHH
Q 008210 8 SRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLA 85 (574)
Q Consensus 8 ~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~ 85 (574)
.+..++.+...+++++..-+ .|...-..+.+++.||+++++.+.+...+++...+ +|++|.|+||+.||+++.+|+.+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 45667777777777776644 77777788999999999999999988888777654 99999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHH
Q 008210 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNM 163 (574)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~ 163 (574)
+.+++++..++ ..||++.++|.+.|+|.+...+.+...++|.|| .+|++++++...+...|..++-..+..
T Consensus 108 W~~Av~~~~fs-------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 108 WTLAVFASGFS-------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99997764433 369999999999999999999999999999999 589999999998888887665444443
No 91
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=7.9e-20 Score=179.43 Aligned_cols=343 Identities=16% Similarity=0.131 Sum_probs=220.0
Q ss_pred hhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHh
Q 008210 40 SVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATN 118 (574)
Q Consensus 40 ~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 118 (574)
++++-++++++++.....+..+ +.|+.|.+.||+|+|..+++|...+...++++.+. .+|++++++|.+||+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-------~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-------NSYPMLFVARSLQGV 171 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-------chhHHHHHHHHHhhh
Confidence 3456678889996555556655 59999999999999999999999999998886544 478999999999999
Q ss_pred hhHhhhhHHHHHHHhhCCC--CcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 008210 119 SSAWLGTAVLVTNMRNFPL--SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTP 196 (574)
Q Consensus 119 g~g~~~~~~~~~~~~~fp~--~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (574)
|.++...+...++++.||+ +||.++|+..++.++|-.++|++++.+.+..+...
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~a------------------------ 227 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSA------------------------ 227 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcC------------------------
Confidence 9999999999999999994 58999999999999999999999988765321111
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCC
Q 008210 197 ASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQS 276 (574)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (574)
.|....++ +++... .-+++ . +|.++
T Consensus 228 ------------PFlVL~~v-----~Lld~~------------------------L~l~v-i-------~p~~~------ 252 (464)
T KOG3764|consen 228 ------------PFLVLAIV-----LLLDGA------------------------LQLLV-I-------EPTEM------ 252 (464)
T ss_pred ------------cHHHHHHH-----HHHHHH------------------------HHHhe-e-------Ccccc------
Confidence 11111100 000000 00000 0 11100
Q ss_pred CCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHH
Q 008210 277 VGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLL 356 (574)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 356 (574)
+++ +..++.++++++++|..+..
T Consensus 253 -------------------------------------~~~--------------------~~~~~~~~~~Ll~dP~I~~~ 275 (464)
T KOG3764|consen 253 -------------------------------------DPD--------------------STEQGTPMWSLLMDPYILLI 275 (464)
T ss_pred -------------------------------------Ccc--------------------ccccCccHHHHHhCchHhhh
Confidence 000 00112456899999998876
Q ss_pred HHHHHhhcccceeeeccHHHHH-HhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHH-HHHHHHHH
Q 008210 357 FLVYFAGVGSGVTVLNNLAQIG-IAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTC-TQVIMIIT 432 (574)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~-~~~~~~i~ 432 (574)
..............-..++... +....+ +.+.......+...+|..+.|.+.||++..+ |.+.+ +.+...+.
T Consensus 276 agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~----wl~~~~gl~~~G~~ 351 (464)
T KOG3764|consen 276 AGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR----WLLSLGGLATVGVS 351 (464)
T ss_pred hcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh----HHHHHHHHHHHHHH
Confidence 5543322221111223333322 333321 2344445677888999999999999998552 33333 33333333
Q ss_pred HHHHHhcCch-HHHHHHHHHhhhccchhhhHHHHHHhhcCc------cchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 433 YLLFASSIDG-TLYAATALLGICYGVQFSIMIPTVSELFGL------EHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 433 ~~~~~~~~~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
.......+.. .+++.....+++.+..-.....+...+... +.+|.++++...+..++.+ +||.+.|.+++..
T Consensus 352 ~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a-~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 352 SGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYA-IGPTFGGSLVEAI 430 (464)
T ss_pred hchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhh-ccccccchheeeh
Confidence 3233333333 455554444554444433333333333322 2588999999999999998 9999999999884
Q ss_pred hhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 506 AAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
+|.+...+.+..+++-..+..+++.
T Consensus 431 ---------------------GF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 431 ---------------------GFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888887777777776665554443
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.83 E-value=3.1e-17 Score=176.39 Aligned_cols=419 Identities=12% Similarity=0.061 Sum_probs=230.5
Q ss_pred cchhhc-chHHHHhhhCCCHHHHHHHHHHHHh-hhhccccchhcccc-CCChHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 008210 28 AYNFPL-YSHSLKSVLGFNQHQLTMLGVANDI-GENVGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (574)
Q Consensus 28 ~~~~~~-~~~~l~~~l~~s~~~~~~i~~~~~~-~~~~~~~~G~l~dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 104 (574)
.|.... ...++++++|++.++.+++...+.. .....++.|+++|| +|||+++.++.+++.+++.++.+. . +
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~-----~-~ 110 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS-----G-H 110 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh-----c-c
Confidence 344433 3455678999999999885444433 33446789999999 599999999999999887664322 2 1
Q ss_pred hHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-C--cchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 008210 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-S--RGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVP 181 (574)
Q Consensus 105 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~--rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~ 181 (574)
+.+.+++.++++|+|.|...+....++.++||+ + |+.+.++...+.++|+.++|.+.+.+.+..+|++.+....+..
T Consensus 111 ~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 111 DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 345677789999999998888888899999974 2 4557888888999999999999998877778888888777655
Q ss_pred HHHHHHHHhccc-CCCCC--CCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccc
Q 008210 182 AVCLVMMYFVRP-CTPAS--GEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPV 258 (574)
Q Consensus 182 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (574)
.++.+...+.+. .++.. .+++..++.........+....+...... +.....+.....+.. ..+... .
T Consensus 191 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~-~ 261 (500)
T PRK09584 191 LITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLL-----HNQEIARMALGVVAL---GIVVIF-G 261 (500)
T ss_pred HHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHH-----hcchHHHHHHHHHHH---HHHHHH-H
Confidence 554433322221 11111 01000111100100110110111100000 000000000000000 000000 0
Q ss_pred cchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCC
Q 008210 259 KMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKR 338 (574)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (574)
+ . . .+ .
T Consensus 262 ~-------------------------------------------------------------------~-~--~~--~-- 267 (500)
T PRK09584 262 K-------------------------------------------------------------------E-A--FA--M-- 267 (500)
T ss_pred H-------------------------------------------------------------------H-H--hh--c--
Confidence 0 0 0 00 0
Q ss_pred CCCccHHHhhhchhHHH--HHHHHHhhcccceeeeccHHHHHHh------hCCc-hhhHHHHHHHHHHhhhhhhhhhhhh
Q 008210 339 GEDFKFTEAVVKADFWL--LFLVYFAGVGSGVTVLNNLAQIGIA------QGVH-DTTILLSLFSFCNFVGRLGGGVVSE 409 (574)
Q Consensus 339 ~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~-~~~~~~~~~~i~~~ig~~~~G~l~D 409 (574)
.+.-++|.... .++...+.+.........+..+..+ .|+. +..++.++..+...+..++.+++-+
T Consensus 268 ------~~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~ 341 (500)
T PRK09584 268 ------KGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYN 341 (500)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 00001111111 1111111111111111222221111 1222 3556667777777777777777777
Q ss_pred hhhccccCchhhHHHHHHHHHHHHHHHHhcC----------chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhh
Q 008210 410 HFVRKTIPRTIWMTCTQVIMIITYLLFASSI----------DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLIS 479 (574)
Q Consensus 410 r~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~----------~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~ 479 (574)
|.++| .+....+.++.++.+++++.+.... ...+.+...+.|++.+...|....++.+..|++.+|..+
T Consensus 342 ~l~~r-~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~ 420 (500)
T PRK09584 342 KMGDR-LPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIM 420 (500)
T ss_pred HhCcC-CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHH
Confidence 77666 3344667778888888887754321 235677888999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 480 NFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 480 g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
|+......+++. ++..+.+.........+. -...++|...|...++.++++.++.+.+.++.+
T Consensus 421 g~~~l~~a~g~~-~~g~~~~~~~~~~~~~~~-----------~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~ 483 (500)
T PRK09584 421 GSWFLTTAGAAL-IAGYVANLMAVPDNVTDP-----------LMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLN 483 (500)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhccccccccc-----------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987766666665 333333322111000000 000023677787777766655544444444433
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.83 E-value=1.6e-17 Score=173.70 Aligned_cols=361 Identities=12% Similarity=0.001 Sum_probs=215.8
Q ss_pred HHHHhhhcc-chhhcchHHHHhhhCCCHHHHHHHHHH--HHhhh-hccccc-hhccccCCChHHHHHHHHHHHHHHHHHH
Q 008210 20 WVQIAAGNA-YNFPLYSHSLKSVLGFNQHQLTMLGVA--NDIGE-NVGLLP-GLASNKFPPWLVLFIGSLACFFGYGVLW 94 (574)
Q Consensus 20 l~~~~~g~~-~~~~~~~~~l~~~l~~s~~~~~~i~~~--~~~~~-~~~~~~-G~l~dr~G~r~~~~~g~~~~~~g~~~~~ 94 (574)
...+..|.. .....+.|.+.++.|.+.++++.++.. ..... +.+|+. ++..||+||||..+++..+..... +..
T Consensus 8 ~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~-~~~ 86 (390)
T TIGR02718 8 LLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC-LAS 86 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH-HHH
Confidence 334555664 344567788888999999999996422 23333 448877 557999999998766554322211 111
Q ss_pred HHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHH
Q 008210 95 LAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLL 173 (574)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~ 173 (574)
+.......+ ....++....+..+..+...+..-.+..++.+ ++++.+.+....+..+|..+++.....+.+..+|+..
T Consensus 87 ~~~~~~~~~-~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~ 165 (390)
T TIGR02718 87 LALVGPDVA-GAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPA 165 (390)
T ss_pred HHcCCcchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 121112221 12223333444455555555666666778887 4678888888888888888888776666555556655
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhh
Q 008210 174 LVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAP 253 (574)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (574)
+.+.....++..+..++++
T Consensus 166 f~~~a~l~~~~~~~~~~~~------------------------------------------------------------- 184 (390)
T TIGR02718 166 FLLVACVPLASLVCVLWLK------------------------------------------------------------- 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHcC-------------------------------------------------------------
Confidence 5433322222111111110
Q ss_pred hcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhc
Q 008210 254 LAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKK 333 (574)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (574)
+++ ++++ +++
T Consensus 185 -------------~~~----------------------~~~~-----------------~~~------------------ 194 (390)
T TIGR02718 185 -------------DRA----------------------VASP-----------------EAP------------------ 194 (390)
T ss_pred -------------CCC----------------------cCcc-----------------ccc------------------
Confidence 000 0000 000
Q ss_pred cCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCch--hhHHHHHHH-HHHhhhhhhhhhhhhh
Q 008210 334 RRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHD--TTILLSLFS-FCNFVGRLGGGVVSEH 410 (574)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~-i~~~ig~~~~G~l~Dr 410 (574)
.++..++++.+|+|.+|......++..........+.+.+.++.|++. .+....... ....++.+++|++.||
T Consensus 195 ----~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r 270 (390)
T TIGR02718 195 ----LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR 270 (390)
T ss_pred ----hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 000123467788888877666655554444444556777888888853 455555554 4566789999999999
Q ss_pred hhccccCchhhHHHHHHHHHHHHHH-HHhc-----Cc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCc-cchhhhhhhh
Q 008210 411 FVRKTIPRTIWMTCTQVIMIITYLL-FASS-----ID-GTLYAATALLGICYGVQFSIMIPTVSELFGL-EHFGLISNFL 482 (574)
Q Consensus 411 ~g~r~~~~~~~~~~~~~~~~i~~~~-~~~~-----~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~ 482 (574)
+|+| ..+.++.++..+.... .... .. ..++....+.+++.|..++.....+.+..++ +++|+.+++.
T Consensus 271 ~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 345 (390)
T TIGR02718 271 AGLW-----RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAV 345 (390)
T ss_pred hhHH-----HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 9998 3344333333222111 1111 11 1223333444566777777777777777776 8899999999
Q ss_pred hhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHH
Q 008210 483 ALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 483 ~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (574)
+...+++.. ++|.+.|+++|.. +|+..|++.+++.+++.+
T Consensus 346 ~~~~~lg~~-~g~~~~G~l~~~~---------------------G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 346 QSTRDLGEL-IASSIAGYLTDRF---------------------GYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHH---------------------ccHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999984 588888877776666544
No 94
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.82 E-value=9.3e-18 Score=179.29 Aligned_cols=352 Identities=13% Similarity=0.065 Sum_probs=225.3
Q ss_pred HHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 008210 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (574)
Q Consensus 38 l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (574)
+..++.-|...++++..+..+-.+ +++++|.++||+.||++++.+-++..+..+.+.+. ......+.|.+++.-++.
T Consensus 36 lv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l--~~~~~~~~~~Ll~~~fl~ 113 (524)
T PF05977_consen 36 LVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVL--AFFGLLSPWLLLILTFLL 113 (524)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHH--HHhCcCCHHHHHHHHHHH
Confidence 344556688888888777777765 59999999999999999999888777665444333 222223578999999999
Q ss_pred HhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCC
Q 008210 117 TNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCT 195 (574)
Q Consensus 117 G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (574)
|++.++..++-..++.+..|+ +...|+++....+.++-.++|.+++.+....+-.+.+.++++..++.+....
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~------ 187 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALL------ 187 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999995 7888999999888888888888877664322112222222111111100000
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccC
Q 008210 196 PASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQ 275 (574)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (574)
.. +++.
T Consensus 188 -------------------------------------------------------------~~-------~~~~------ 193 (524)
T PF05977_consen 188 -------------------------------------------------------------RW-------KPPP------ 193 (524)
T ss_pred -------------------------------------------------------------Hc-------cccc------
Confidence 00 1000
Q ss_pred CCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHH
Q 008210 276 SVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWL 355 (574)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 355 (574)
.++ +.+++ + ........++-..++|....
T Consensus 194 ----------------~~~------------------~~~~e---------------~--~~~~l~~G~ryv~~~~~l~~ 222 (524)
T PF05977_consen 194 ----------------PPS------------------SLPRE---------------R--FFSALREGLRYVRSSPPLRS 222 (524)
T ss_pred ----------------ccc------------------ccchh---------------h--hhhhHHHHHHHHhcchHHHH
Confidence 000 00000 0 00000011223334454433
Q ss_pred HHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHH
Q 008210 356 LFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIIT 432 (574)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~ 432 (574)
.....++.......+...+|.+.++ +|.+ ..+++.+..+++.++|.++.+++.+|++++ .++..+.+..+++
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~ 297 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALA 297 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHH
Confidence 3222222212222233346767655 5554 446788888888888888888887777665 4555666666776
Q ss_pred HHHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcc
Q 008210 433 YLLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQG 511 (574)
Q Consensus 433 ~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~ 511 (574)
++.+...++ +...+..++.|++...........+++..|++.+|++.++..+....+.. +|..+.|.+.|..
T Consensus 298 ~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~-lGsll~G~la~~~------ 370 (524)
T PF05977_consen 298 LLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMP-LGSLLWGFLADHF------ 370 (524)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHh------
Confidence 666665443 45556677888888877778888999999999999999999988877777 8999999999984
Q ss_pred cccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 512 FNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
+.+.++.+.+++.+++.++....
T Consensus 371 ---------------g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 371 ---------------GVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred ---------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 35667776666555555544433
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.82 E-value=8.8e-24 Score=225.26 Aligned_cols=377 Identities=16% Similarity=0.165 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHhhhHhhh
Q 008210 47 HQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES-LPYWLLWIALCVATNSSAWLG 124 (574)
Q Consensus 47 ~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~l~G~g~g~~~ 124 (574)
.+.+++.+...++..+ +++.|.++||+|||+++.++.++..+++++..++ +. .+++.++++|++.|+|.|..+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFA-----PSYNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccccccc
Confidence 4566777777788876 9999999999999999999999999997664332 20 157899999999999999999
Q ss_pred hHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhcc---CChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 008210 125 TAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH---NSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGE 200 (574)
Q Consensus 125 ~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (574)
+....++.|..| ++||+..++...+..+|..+...+...+.. ++.||..+....+|.++..+...++++.|++...
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~ 200 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLS 200 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecc
Confidence 999999999997 689999999999988887666555443322 2358888888877777666666666666655332
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCC
Q 008210 201 DSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSS 280 (574)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (574)
+ .++++++ +.
T Consensus 201 ~-----------------------------------------------------------------~~~~~A~-~~---- 210 (451)
T PF00083_consen 201 K-----------------------------------------------------------------GRDEEAE-KV---- 210 (451)
T ss_pred c-----------------------------------------------------------------ccccccc-cc----
Confidence 1 1111000 00
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchh-----HHH
Q 008210 281 DSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKAD-----FWL 355 (574)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~ 355 (574)
+++..+++..++. . + +..++ .++ . .+.+.++++.++++. +..
T Consensus 211 --l~~~~~~~~~~~~------------------~----~----~~~~~---~~~-~-~~~~~~~~~l~~~~~~~~~~~~~ 257 (451)
T PF00083_consen 211 --LRKLRGKEIEDEE------------------I----E----EIKAE---KKE-S-QESKASWRDLFRNKKYRKRLLIA 257 (451)
T ss_pred --ccccccccccccc------------------c----c----ccccc---ccc-c-cccceeeeecccccccccccccc
Confidence 0000000000000 0 0 00000 000 0 000123344444432 111
Q ss_pred HHHHHHhhcccceeeeccHHHHHHhhCCchhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHH
Q 008210 356 LFLVYFAGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLL 435 (574)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~ 435 (574)
..+..+..........++.+.+.+..|.++.........+...++.+++.++.||+||| .++..+...+.++...
T Consensus 258 ~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~ 332 (451)
T PF00083_consen 258 LLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLI 332 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccc
Confidence 11222222222233445566677667775443344456677778888899999999999 4444444454444443
Q ss_pred HH-----hcCc-----hHHHHHHHHHhhhcc-chhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 436 FA-----SSID-----GTLYAATALLGICYG-VQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 436 ~~-----~~~~-----~~l~~~~~l~g~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
+. ..+. ...++...+...+++ +..+....+..|.||++.|+.+.|+....+.++++ ++|.+...+.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~-i~~~~~~~~~~~ 411 (451)
T PF00083_consen 333 LGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGF-IIPFLFPYLFNN 411 (451)
T ss_pred cccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccc-cccccccccccc
Confidence 32 1111 122222333333333 33455557889999999999999999999999998 788888877776
Q ss_pred hhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 008210 505 EAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIRPVYQ 558 (574)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (574)
. +....+.+.+++++++.++.+...+|+|++..
T Consensus 412 ~---------------------~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 412 L---------------------GGWGVFLIFAGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred c---------------------cccccchhhHHHHHHHHhheeEEEeeCCCCCH
Confidence 3 12345666667777777777777888876544
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.81 E-value=9.7e-18 Score=171.79 Aligned_cols=159 Identities=14% Similarity=0.005 Sum_probs=131.4
Q ss_pred CcHHHHHH-HHHHHHhhhccchhhcchHHHHhhhCCCHHH-HHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHH
Q 008210 10 PPWVGLGA-AVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQ-LTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 10 ~~w~~~~~-~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~-~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
+.|..... .++..+..-.....++..|++.+++|+|.+| .+.+...+..++. ..++.|+++||+|.|+++.++.+..
T Consensus 23 ~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~W 102 (511)
T TIGR00806 23 KSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSF 102 (511)
T ss_pred cchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 45666443 3344455566778888899999999999999 8887666666665 4999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
++.++++.+. .+++.+.+.|++.|++.|..+ +...++.+||| ++|++++|+..++..+|.++++++...+
T Consensus 103 sl~t~L~~fa-------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll- 173 (511)
T TIGR00806 103 VCVWLLLLLG-------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL- 173 (511)
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9998775543 357899999999999999998 99999999999 6899999999999999999999999884
Q ss_pred cCChhHHHHHHH
Q 008210 166 HNSSSKLLLVLA 177 (574)
Q Consensus 166 ~~~~~~~~~~~~ 177 (574)
...+|+.+.-++
T Consensus 174 ~s~gWr~y~~Ln 185 (511)
T TIGR00806 174 VTLGWISYSTLN 185 (511)
T ss_pred HhcCchhHHHHH
Confidence 344566555444
No 97
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=5.6e-18 Score=169.61 Aligned_cols=406 Identities=15% Similarity=0.137 Sum_probs=258.6
Q ss_pred ccccCcHHHHHHHHHHHHhhhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHH
Q 008210 6 AGSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGS 83 (574)
Q Consensus 6 ~~~~~~w~~~~~~~l~~~~~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~ 83 (574)
+..++||+++++..+.+++.++ ...|+....+.++.++ +....-|.+..+++.+.. ++++-|+.||+|-|...++|.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 4568999999999999988877 5568888888888899 777777888888777764 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCChhHH--HHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHH
Q 008210 84 LACFFGYGVLWLAVSRTVESLPYW--LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEI 160 (574)
Q Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~--~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i 160 (574)
++.++|..+=.++...+.++ .++ ....+..+.+.+.-+....+..+..-||| ++|..|..+-..++.+|.+++-.+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~-~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPP-LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHhhhccCccccc-cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 99999976643332222222 455 66778999999988888888899999996 799999999999998988776444
Q ss_pred HHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhh
Q 008210 161 YNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISY 240 (574)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (574)
...+.++ ++ +.+...|.+-.... .+
T Consensus 196 ppilV~~---------------------------~~-----~~~~~~~~~~~~f~---~~-------------------- 220 (480)
T KOG2563|consen 196 PPILVPS---------------------------SK-----DSEDNSWLFFTLFL---GV-------------------- 220 (480)
T ss_pred cceecCC---------------------------CC-----CcchhHHHHHHHHH---HH--------------------
Confidence 4433221 11 11222222211100 00
Q ss_pred hHHHHHHHHHhhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 008210 241 ASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVAL 320 (574)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (574)
.++.++.+... ... +.++ ++.| |+ .++.
T Consensus 221 --~~l~~l~l~l~--~~~----~~~~-------------------------P~tP---ps--------------~s~~-- 248 (480)
T KOG2563|consen 221 --ECLAALLLALV--LFV----FTKK-------------------------PPTP---PS--------------ASQA-- 248 (480)
T ss_pred --HHHHHHHHHHH--HHh----cCCC-------------------------CCCC---Cc--------------hhHh--
Confidence 00000011000 000 1111 1222 11 0000
Q ss_pred HHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHh
Q 008210 321 LLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNF 398 (574)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ 398 (574)
+. .+.....+.++.+++++|.++.+++....+........+.......|++ .++.......+.++
T Consensus 249 -----------~~--~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gm 315 (480)
T KOG2563|consen 249 -----------AL--QDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGM 315 (480)
T ss_pred -----------hh--hcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHH
Confidence 00 0011234667899999999998888776554333333222233335665 67888888889999
Q ss_pred hhhhhhhhhhhhhhccccCchhhHHHHHHHHHHH-HHHHHhc----CchHHHHHHHHHhhhccchhhhHHHHHHhhcCcc
Q 008210 399 VGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIIT-YLLFASS----IDGTLYAATALLGICYGVQFSIMIPTVSELFGLE 473 (574)
Q Consensus 399 ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~-~~~~~~~----~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~ 473 (574)
+|..+.|.+.||...-+ ....+......++ +.+.... +...++....+.|++..+..|+..-+..|..-|.
T Consensus 316 lga~~~gii~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv 391 (480)
T KOG2563|consen 316 LGALASGIIADKTKKFK----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPV 391 (480)
T ss_pred HHHHHHHhhhhhhhhHH----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeecccc
Confidence 99999999999974442 1222223333333 2222221 2346777788888888888888777888887778
Q ss_pred chhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 008210 474 HFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 474 ~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (574)
.-+...|++++.+++.+. +-..+.+...+..... +.+...-+.+...+++++.+..+++++.
T Consensus 392 ~E~tSsGll~~~gq~f~~-~~~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 392 AEGTSSGLLNLSGQIFGV-ILVFIMGILAEDLGPP-----------------GNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred CCcccceeEEeehhHHHH-HHHHHHHHHhhccCCC-----------------CCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 889999999999999987 5566666665553211 1133344445555556665665555554
Q ss_pred hh
Q 008210 554 RP 555 (574)
Q Consensus 554 ~~ 555 (574)
|+
T Consensus 454 ~R 455 (480)
T KOG2563|consen 454 RR 455 (480)
T ss_pred Hh
Confidence 43
No 98
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.80 E-value=4.3e-19 Score=165.95 Aligned_cols=346 Identities=15% Similarity=0.147 Sum_probs=215.0
Q ss_pred hcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhcccc-CCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 32 ~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
+.+..+++.|.+++.++..++-+.+..-.++ +.+.|++.|| +|.|....+-+++..+|.+++ + .+-.. +.||.+
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliF--a-~Ggi~-~aFw~M 139 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIF--A-AGGIS-HAFWTM 139 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHH--H-hchHH-HHHHHH
Confidence 3455667777788887777765555666655 9999999995 898887777777777776553 2 23333 379999
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMM 188 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (574)
.++|++.|+|.--.-.+...++..||. |+.+.++|+..+..-+|..+=-.+...+.+. +-...|
T Consensus 140 ~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~-------~~~~~~-------- 204 (459)
T KOG4686|consen 140 LAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT-------MGRMFP-------- 204 (459)
T ss_pred HhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH-------HHHhcc--------
Confidence 999999999987766778888999997 8999999998887777764322222222110 000000
Q ss_pred HhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCc
Q 008210 189 YFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTS 268 (574)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (574)
+......++. +...+-. +..-.+++.-.-+ .++
T Consensus 205 ----------------~~ghT~LG~~-l~~~~~t---------------------c~~slical~lg~---------~D~ 237 (459)
T KOG4686|consen 205 ----------------GVGHTLLGLW-LCFEVKT---------------------CKQSLICALSLGL---------SDD 237 (459)
T ss_pred ----------------cchHHHHHHH-HHHHHHH---------------------HHHHHHHHHHhhh---------hhh
Confidence 0000000000 0000000 0000000000000 000
Q ss_pred ccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhh
Q 008210 269 ESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAV 348 (574)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (574)
+ .|.++ ..+++. ..|.|+.....+
T Consensus 238 r-----------------------Aeril-------------------------h~e~g~---~Ge~pkLtdv~~----- 261 (459)
T KOG4686|consen 238 R-----------------------AERIL-------------------------HLEEGF---LGEEPKLTDVNT----- 261 (459)
T ss_pred H-----------------------HHHHH-------------------------hhhcCc---ccCCcccccccc-----
Confidence 0 00000 000000 000011111011
Q ss_pred hchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHH
Q 008210 349 VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCT 425 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~ 425 (574)
-.|.+|.+.+.+++...+.+.++..-|.++++ .|++ .++.+.+.......+..++.|.++||+|++- +++..+
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~----~wv~~a 337 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL----WWVASA 337 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee----hhHHHH
Confidence 24678999999888877777777777777777 6885 4567888888889999999999999999992 445555
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 426 QVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 426 ~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
.+...++-..+.+. ...-++.+.+.|+.+........+.++-+.|.++.|+++|.+....++|-. +-|.++|++.|+.
T Consensus 338 ~~~tl~~H~~l~Ft-~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla-~i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 338 CILTLLGHSGLFFT-FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLA-FIPIIAGFIADGD 415 (459)
T ss_pred HHHHHHHhhhHHhh-hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhh-HHhhhhheeecCC
Confidence 55555555444332 234466777788877665555667777888899999999999999999998 8899999999985
No 99
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=1.9e-17 Score=179.84 Aligned_cols=349 Identities=12% Similarity=0.031 Sum_probs=219.1
Q ss_pred hhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHh
Q 008210 40 SVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATN 118 (574)
Q Consensus 40 ~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 118 (574)
+.+..+.....+..+.+.+|.++ +++.|.++||+|||++++.+.++..++.++..++ ++++.+++.|++.|+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------PNYWMFLIFRFLSGF 183 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-------CcHHHHHHHHHHHHh
Confidence 44566677777778888888877 8899999999999999999999988886553322 579999999999999
Q ss_pred hhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 008210 119 SSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPA 197 (574)
Q Consensus 119 g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (574)
+.+..+.....++.|+++ ++|+.+..+ ....-.++.+.++..+.+.. +||++.+...+|..+.++..++.++.+++
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rw 260 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRW 260 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHH
Confidence 999999999999999995 799999999 66666777788888877765 89999998888888777774444444433
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCcccccccCCC
Q 008210 198 SGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSV 277 (574)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (574)
...+.+.+....
T Consensus 261 l~~~g~~~~a~~-------------------------------------------------------------------- 272 (521)
T KOG0255|consen 261 LLSKGRIDEAIK-------------------------------------------------------------------- 272 (521)
T ss_pred HHHcCchHHHHH--------------------------------------------------------------------
Confidence 221111000000
Q ss_pred CCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchhHHHHH
Q 008210 278 GSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLF 357 (574)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 357 (574)
.+++..+.+ ..+. +..+..+... ..+++. . ....+...+.+.++.+++....
T Consensus 273 ----~l~~~a~~n-~~~~-----------------~~~~~~~~~~-~~~~~~---~--~~~~~~~~~~~l~~~~~l~~~~ 324 (521)
T KOG0255|consen 273 ----ILKKIAKLN-GRKL-----------------SVKELLRLEL-LLRPLK---L--LFTEPKISFLDLFRTPRLRYRT 324 (521)
T ss_pred ----HHHHHHhhc-CCCC-----------------CcHHHHHHHH-HhhHhh---h--hccCCCCchhhhhcCHHHHHHH
Confidence 000000000 0000 0000000000 000000 0 1111223466777777543333
Q ss_pred HHHHhhcccceeeeccHHHHHHhhCCchhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH
Q 008210 358 LVYFAGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA 437 (574)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~ 437 (574)
+...+.+.......+.+......+|.+ -.......+.....+....+...|++||| .....+..+..++++...
T Consensus 325 ~~~~~~~~~~~~~y~gl~~~~~~lg~~-~~~~~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~ 398 (521)
T KOG0255|consen 325 LYLLFIWFVFSLVYYGLSLNVSGLGGN-IYLNFTLSGLVELPAYFRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFG 398 (521)
T ss_pred HHHHHHHHHHhHHHHhhhhhhhhcCch-HHHHHHHHHHHHhhHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHH
Confidence 333222211111111122222223332 22223334446667777779999999999 677777777777777665
Q ss_pred hcC-c-h--HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 438 SSI-D-G--TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 438 ~~~-~-~--~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
... . . ..++...+..++.+..+.....+..|.+|+..|..+.|.......+++. ++|.+.-..
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i-~ap~~~~~~ 465 (521)
T KOG0255|consen 399 WLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSI-LAPLFPLLL 465 (521)
T ss_pred HhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 432 1 1 2444445555667777777899999999999999999999999999997 788554333
No 100
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.75 E-value=1.1e-14 Score=153.98 Aligned_cols=174 Identities=16% Similarity=0.067 Sum_probs=119.2
Q ss_pred cHHHHHHHHHHHHhhh-ccchhhcchH-HHHhhhCCCHHHHHHHHHHHHhh-hhccccchhccccC-CChHHHHHHHHHH
Q 008210 11 PWVGLGAAVWVQIAAG-NAYNFPLYSH-SLKSVLGFNQHQLTMLGVANDIG-ENVGLLPGLASNKF-PPWLVLFIGSLAC 86 (574)
Q Consensus 11 ~w~~~~~~~l~~~~~g-~~~~~~~~~~-~l~~~l~~s~~~~~~i~~~~~~~-~~~~~~~G~l~dr~-G~r~~~~~g~~~~ 86 (574)
++..+...+...+... ..|....+.| ++++++|++..+.+++...+... .+..+++|+++||+ |||+++.+|.+++
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 3444444444444332 3555544444 45677999999999964444444 45689999999999 9999999999999
Q ss_pred HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC---CcchHHHHHHhhhhhHHHHHHHHHHH
Q 008210 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL---SRGTVAGILKGYGGLSAAVFTEIYNM 163 (574)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~---~rg~a~gi~~~~~~~g~~i~~~i~~~ 163 (574)
.++++++... .+ +...+.+...+.++|.|...+....++.+.||+ +|..+.++...+..+|+.++|.+.+.
T Consensus 87 ~lg~lll~~~-----~~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 87 AIGHVVLGAS-----EI-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHHh-----hc-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 9997653211 11 112233344444566666666667789999973 58889999999888999999999998
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHh
Q 008210 164 LLHNSSSKLLLVLAVGVPAVCLVMMYF 190 (574)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (574)
+.+..+|++.+..+.+..+++++..+.
T Consensus 161 L~~~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 161 AQEEYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHhhhChHHHHHHHHHHHHHHHHHHHH
Confidence 877777888777766555555444443
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.73 E-value=1.1e-17 Score=183.98 Aligned_cols=136 Identities=13% Similarity=0.033 Sum_probs=112.0
Q ss_pred hhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHH--hh-------
Q 008210 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAV--SR------- 99 (574)
Q Consensus 30 ~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~--~~------- 99 (574)
..+...++++++|+++.++.+++.+.+.++..+ .++.|++.||+|||+.+.+|.+++++|++++.+.- .+
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 455667899999999999999987777788765 99999999999999999999999999988765431 00
Q ss_pred -------------cc--------------------C--ChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHH
Q 008210 100 -------------TV--------------------E--SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVA 143 (574)
Q Consensus 100 -------------~~--------------------~--~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~ 143 (574)
.. . +..+..++++|+++|+|.+..++....++.+|+| ++|+++.
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 00 0 1124567789999999999999999999999998 6899999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhc
Q 008210 144 GILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 144 gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
++...+..+|+++++.+++.+.
T Consensus 211 ~i~~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 211 GILESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred HHHHHHHHhhhHHHHHHHHHHH
Confidence 9999999999988888777653
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.73 E-value=2.9e-15 Score=159.34 Aligned_cols=338 Identities=11% Similarity=0.050 Sum_probs=189.9
Q ss_pred chHHHHhhhCCCHHHHHHHHHHH-Hhhhhccccchhcccc----CCC-hHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 008210 34 YSHSLKSVLGFNQHQLTMLGVAN-DIGENVGLLPGLASNK----FPP-WLVLFIGSLACFFGYGVLWLAVSRTVESLPYW 107 (574)
Q Consensus 34 ~~~~l~~~l~~s~~~~~~i~~~~-~~~~~~~~~~G~l~dr----~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 107 (574)
+...+.+++|++..+++.+.+.. ....+..|+.|.++|| +|| |+.++.+.+.+++...+++... .......++
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p-~~~~~~~~~ 110 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP-DFGATGKII 110 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC-CCCcchHHH
Confidence 34567888999999999965544 4555669999999999 666 4566677777777755433221 111112245
Q ss_pred HHHHHHHHHHhhhHhhhhHHHHHHHhhCC--CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 108 LLWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 108 ~l~~~~~l~G~g~g~~~~~~~~~~~~~fp--~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
.+++..++.+.+..+...+-..+..++.+ ++|++..++-..+..+|..+.+.+...+..
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~------------------- 171 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVD------------------- 171 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 55666666677777776666677888884 578888888777776766665443321110
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
. + . + .+....|...... .++.. .+..... ....+
T Consensus 172 ---~-~---~----~-~~~~~g~~~~~~i---~~ii~------------------------~v~~~~~-~~~~~------ 205 (444)
T PRK09669 172 ---I-L---G----K-GDEQKGYFYAMMV---MGLLG------------------------VVLFFCC-FFMTK------ 205 (444)
T ss_pred ---H-h---C----C-CchhhhHHHHHHH---HHHHH------------------------HHHHHHH-hCCeE------
Confidence 0 0 0 0 0001111110000 00000 0000000 00000
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
+++ ++ + + + ++......++
T Consensus 206 -e~~------------------------~~----~------------~------------------~---~~~~~~~~~~ 223 (444)
T PRK09669 206 -ERY------------------------TP----E------------V------------------D---NSSSVWKDLK 223 (444)
T ss_pred -Eec------------------------CC----C------------C------------------c---CCCCHHHHHH
Confidence 000 00 0 0 0 0000112346
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCch-hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVHD-TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMT 423 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~ 423 (574)
+.+|+|.++.+....++.............++.+. .+.++ .........+..+++.+++++++||+|+| ..+.
T Consensus 224 ~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~ 298 (444)
T PRK09669 224 LLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFK 298 (444)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHH
Confidence 77888888877665544322221111111222222 12222 23344455677788999999999999998 3344
Q ss_pred HHHHHHHH-HHHHHHh-c-CchHHHHHHHHHhhhccchhhhHHHHHHhhc-------CccchhhhhhhhhhhhhhHHHHH
Q 008210 424 CTQVIMII-TYLLFAS-S-IDGTLYAATALLGICYGVQFSIMIPTVSELF-------GLEHFGLISNFLALGNPLAAFLF 493 (574)
Q Consensus 424 ~~~~~~~i-~~~~~~~-~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~-------~~~~~g~~~g~~~~~~~lg~~~~ 493 (574)
.+.+...+ +..+... . +...+++..++.|++.+...+...++++|.. +.+..|..+|+.+....+|.. +
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~a-l 377 (444)
T PRK09669 299 WTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLA-I 377 (444)
T ss_pred HHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHH-H
Confidence 33333332 2222222 2 2234566677889999988888888998876 345577888999999999998 8
Q ss_pred hHhHHHhhhhhh
Q 008210 494 SGLLAGYIYDNE 505 (574)
Q Consensus 494 gp~l~g~l~~~~ 505 (574)
|+.+.|.+.|..
T Consensus 378 g~~i~g~ll~~~ 389 (444)
T PRK09669 378 GGAVVGWILAWV 389 (444)
T ss_pred HHHHHHHHHHHc
Confidence 999999998874
No 103
>PRK09848 glucuronide transporter; Provisional
Probab=99.72 E-value=2.2e-15 Score=160.42 Aligned_cols=156 Identities=13% Similarity=0.043 Sum_probs=108.2
Q ss_pred HHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCch-hh-HHHHHHHHHHhhhhhhhhhhhhhhhccccCchh
Q 008210 344 FTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVHD-TT-ILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI 420 (574)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~-~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~ 420 (574)
+++.+|||.++...+..++............+++.++ +|.+. .+ +......+...++.++.+++.||+|+| .
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~ 295 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----N 295 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----H
Confidence 4678899998887776666544444444445555554 45532 22 233333566778899999999999988 5
Q ss_pred hHHHHHHHHHHHHHHHHhcC---chHHHHHHHHHhhhccchhhhHHHHHHhhcCc-------cchhhhhhhhhhhhhhHH
Q 008210 421 WMTCTQVIMIITYLLFASSI---DGTLYAATALLGICYGVQFSIMIPTVSELFGL-------EHFGLISNFLALGNPLAA 490 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~lg~ 490 (574)
.+.++.++..++.+++...+ .+..++...+.|++.+...+...++.+|..+. ++.|..+|+.++...+|.
T Consensus 296 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ 375 (448)
T PRK09848 296 TFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQ 375 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHH
Confidence 56666666666666554422 22344556677888888888877787777653 456999999999999999
Q ss_pred HHHhHhHHHhhhhhh
Q 008210 491 FLFSGLLAGYIYDNE 505 (574)
Q Consensus 491 ~~~gp~l~g~l~~~~ 505 (574)
. +|+.+.|.+.+..
T Consensus 376 a-ig~~i~g~~l~~~ 389 (448)
T PRK09848 376 A-IGGSIPAFILGLS 389 (448)
T ss_pred H-HHHHHHHHHHHHc
Confidence 8 8999999998763
No 104
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.70 E-value=2.6e-14 Score=150.46 Aligned_cols=179 Identities=20% Similarity=0.101 Sum_probs=122.4
Q ss_pred hhHHHHHHHHHhhcccceeeeccHHHHHHh--hCC--------ch----hhHHHHHHHHHHhhhhhhhhhhhhhhhc-cc
Q 008210 351 ADFWLLFLVYFAGVGSGVTVLNNLAQIGIA--QGV--------HD----TTILLSLFSFCNFVGRLGGGVVSEHFVR-KT 415 (574)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~--------~~----~~~~~~~~~i~~~ig~~~~G~l~Dr~g~-r~ 415 (574)
+.+|.+++..++.|.+.+.+..+.+.+..+ ++- ++ ..+......+...+..++..++.+|+|+ |
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k- 336 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK- 336 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-
Confidence 468889999999888888777777766543 221 11 1234445555555666677777888874 4
Q ss_pred cCchhhHHHHHHHHHHHHHHHHh-cC------c---------------hHHHHHHHHHhhhccchhhhHHHHHHhhcCc-
Q 008210 416 IPRTIWMTCTQVIMIITYLLFAS-SI------D---------------GTLYAATALLGICYGVQFSIMIPTVSELFGL- 472 (574)
Q Consensus 416 ~~~~~~~~~~~~~~~i~~~~~~~-~~------~---------------~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~- 472 (574)
.+..++.++.++++....+ .+ + ...++.+.+.|+.++.......+++++..++
T Consensus 337 ----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 337 ----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 3445565666666555431 11 1 3566778888999999999888999999984
Q ss_pred -cchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 473 -EHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 473 -~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
+..|..+|+.|.+--+... +.....|.+.+..+ ++-..++.+.++..+++.+.++++.+
T Consensus 413 ~~~~G~~mgilN~~I~lpQi-i~sl~~g~~~~~~g-------------------~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 413 GAGQGLSMGVLNLAIVIPQI-IVSLGSGPWDQLFG-------------------GGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred CCCCcchhhHHHHHHHHHHH-HHHHHHHHHHHHcC-------------------CCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 5679999999998888887 55657777544432 12456788888888888888877766
Q ss_pred hhh
Q 008210 552 RIR 554 (574)
Q Consensus 552 ~~~ 554 (574)
+.+
T Consensus 473 ~~~ 475 (477)
T TIGR01301 473 RPR 475 (477)
T ss_pred CCC
Confidence 654
No 105
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.69 E-value=9.4e-15 Score=147.28 Aligned_cols=152 Identities=17% Similarity=0.113 Sum_probs=116.1
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh---hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA---QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI 420 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~ 420 (574)
+.+++|.++...+..++..+....+..|.+.|..+ .|++ +.+...+.+..+.++||++++++.||+++| .
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~-----~ 209 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG-----R 209 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----H
Confidence 45678888888888888877788888889998865 3664 567788899999999999999999999988 3
Q ss_pred hHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHh
Q 008210 421 WMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGY 500 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~ 500 (574)
.+.++.++..++..+....+.........+.|++.+..+|.......+.+|+ +.+.+.++. ..+.+|+. +.|.+.|.
T Consensus 210 ~l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~-i~P~l~G~ 286 (310)
T TIGR01272 210 YLAFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGA-IVPLLQGS 286 (310)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcch-HHHHHHHH
Confidence 4445555555555444433333333466678999999999988888888874 466777775 56778887 89999999
Q ss_pred hhhhh
Q 008210 501 IYDNE 505 (574)
Q Consensus 501 l~~~~ 505 (574)
+.|..
T Consensus 287 lad~~ 291 (310)
T TIGR01272 287 LADCL 291 (310)
T ss_pred HHHhc
Confidence 99974
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.68 E-value=1.1e-13 Score=143.76 Aligned_cols=158 Identities=16% Similarity=0.136 Sum_probs=121.1
Q ss_pred HHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhC-Cc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchh
Q 008210 344 FTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQG-VH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTI 420 (574)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~ 420 (574)
.++++|+|++..+.+..++.......+..+.+.+.++.| .+ ..+...++..++.++.-...+++..|+|.| +
T Consensus 200 ~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ 274 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----W 274 (400)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----H
Confidence 367899999988777777766556666677888899988 53 345566677788888888999999999888 7
Q ss_pred hHHHHHHHHHHHHHHHHhc-Cch-HHHHHH----HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhh-hhhhHHHHH
Q 008210 421 WMTCTQVIMIITYLLFASS-IDG-TLYAAT----ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLAL-GNPLAAFLF 493 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~~~-~~~-~l~~~~----~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~lg~~~~ 493 (574)
++.++.+..++=..+.+.. ++. ..++.. .+-|+.++..+.....++.+..|++.++++.|+++. ..++|+. +
T Consensus 275 ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~-i 353 (400)
T PF03825_consen 275 LLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGA-I 353 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHH-H
Confidence 7777777777766565543 333 222222 346888888888888999999999999999999876 4678887 8
Q ss_pred hHhHHHhhhhhhhh
Q 008210 494 SGLLAGYIYDNEAA 507 (574)
Q Consensus 494 gp~l~g~l~~~~~~ 507 (574)
|..++|+++|+.+.
T Consensus 354 G~~igG~l~~~~g~ 367 (400)
T PF03825_consen 354 GSLIGGWLYDAFGA 367 (400)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999643
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.67 E-value=2.6e-14 Score=153.22 Aligned_cols=342 Identities=12% Similarity=0.025 Sum_probs=189.1
Q ss_pred hHHHHhhhCCCHHHHHHH-HHHHHhhhhccccchhccc----cCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 008210 35 SHSLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASN----KFPP-WLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (574)
Q Consensus 35 ~~~l~~~l~~s~~~~~~i-~~~~~~~~~~~~~~G~l~d----r~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 108 (574)
..++.+.+|++..+++.+ ...-....+..|+.|.++| |+|| |+.+++|.+.+++++.+++... .......++.
T Consensus 30 ~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p-~~~~~~~~~~ 108 (473)
T PRK10429 30 MYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAH-LFEGTAQYVF 108 (473)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCC-CCCccHHHHH
Confidence 455677889999999995 4444555566999999999 5698 6677778888887765543211 1111112344
Q ss_pred HHHHHHHHHhhhHhhhhHHHHHHHhhCC--CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 008210 109 LWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLV 186 (574)
Q Consensus 109 l~~~~~l~G~g~g~~~~~~~~~~~~~fp--~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (574)
+++..++.+++..+...+-.....+.-+ ++|.+..++-..+..+|+.+.+.+...+..
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~-------------------- 168 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN-------------------- 168 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 5555667788888777777777788773 579988888666666665554333221100
Q ss_pred HHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccC
Q 008210 187 MMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKR 266 (574)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (574)
.. .. . +....+...... ..++..+. ........ +
T Consensus 169 ---~~---g~---~--~~~~g~~~~~~i--~~~~~~~~--------------------------~~~~~~~~-------~ 202 (473)
T PRK10429 169 ---YV---GG---G--DRGFGFQMFTLV--LIAFFIVS--------------------------TIITLRNV-------H 202 (473)
T ss_pred ---Hh---CC---C--chhhhHHHHHHH--HHHHHHHH--------------------------HHHHHcCc-------e
Confidence 00 00 0 001111111000 00000000 00000000 0
Q ss_pred CcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHH
Q 008210 267 TSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTE 346 (574)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (574)
++.. ++++ +.+ ++ ++......++.
T Consensus 203 e~~~---------------------~~~~-----------------~~~----------------~~--~~~~~~~~~~~ 226 (473)
T PRK10429 203 EVYS---------------------SDNQ-----------------VSA----------------EG--SHLTLKDIVAL 226 (473)
T ss_pred ecCC---------------------cccc-----------------ccc----------------cc--cCCCHHHHHHH
Confidence 0000 0000 000 00 00001122345
Q ss_pred hhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc-hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHH
Q 008210 347 AVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH-DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTC 424 (574)
Q Consensus 347 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~ 424 (574)
.+++|.++.+....++............+++.+. .+.+ ..+...+...+..+++.++++++.||+|+| ..+..
T Consensus 227 ~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~ 301 (473)
T PRK10429 227 IYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAG 301 (473)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHH
Confidence 5688887766665544433222222222222222 2222 233455556688889999999999999999 44444
Q ss_pred HHHHHHHHHHHHHh-----cC-chHHHHHHHHHhhhccchhhhHHHHHHhh-------cCccchhhhhhhhhhhhhhHHH
Q 008210 425 TQVIMIITYLLFAS-----SI-DGTLYAATALLGICYGVQFSIMIPTVSEL-------FGLEHFGLISNFLALGNPLAAF 491 (574)
Q Consensus 425 ~~~~~~i~~~~~~~-----~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~-------~~~~~~g~~~g~~~~~~~lg~~ 491 (574)
+.++..++.+.+.. .+ ....++...+.|++.+...+..+++++|. .+.+..|..+|.......++..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~a 381 (473)
T PRK10429 302 ASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSA 381 (473)
T ss_pred HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHH
Confidence 44444433333221 12 22444556677888888888888888888 4456678899999999999998
Q ss_pred HHhHhHHHhhhhhh
Q 008210 492 LFSGLLAGYIYDNE 505 (574)
Q Consensus 492 ~~gp~l~g~l~~~~ 505 (574)
+++.+.|++.+..
T Consensus 382 -l~~~i~g~~l~~~ 394 (473)
T PRK10429 382 -FAAFFIGVVLGLI 394 (473)
T ss_pred -HHHHHHHHHHHHc
Confidence 8999999998864
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.67 E-value=2.4e-14 Score=152.71 Aligned_cols=357 Identities=13% Similarity=0.065 Sum_probs=211.6
Q ss_pred HHHhhhccc-hhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccCC-----ChHHHHHHHHHHH-HHHHHH
Q 008210 21 VQIAAGNAY-NFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFP-----PWLVLFIGSLACF-FGYGVL 93 (574)
Q Consensus 21 ~~~~~g~~~-~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~G-----~r~~~~~g~~~~~-~g~~~~ 93 (574)
..++-|..+ ......+.+++++|++.++++...+...+...+.+++|.++||++ ||+.+.++.++.. +++.
T Consensus 34 ~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~-- 111 (468)
T TIGR00788 34 VLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYG-- 111 (468)
T ss_pred HHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHH--
Confidence 445556543 334556778889999999998877777777778888999999998 7888888876653 3311
Q ss_pred HHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcch---HHHHHHhhhhhHHHHHHHHHHHhccCChh
Q 008210 94 WLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGT---VAGILKGYGGLSAAVFTEIYNMLLHNSSS 170 (574)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~---a~gi~~~~~~~g~~i~~~i~~~l~~~~~~ 170 (574)
. .+...+ ......+..++.+++.+...+++-.++.+..+++++. +.+......++|.++++.+.+.+.+..+|
T Consensus 112 --~-l~~~~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~ 187 (468)
T TIGR00788 112 --L-LPGKVS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLT 187 (468)
T ss_pred --h-cccccc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 1 122222 2334445788999999999999999999998844333 33344444457888877777766554455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHH
Q 008210 171 KLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILL 250 (574)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (574)
+..+.+.+...++..+...++++.++..
T Consensus 188 ~~~f~~~a~l~ll~~~~~~~~~E~~~~~---------------------------------------------------- 215 (468)
T TIGR00788 188 RILFLITAALLLLQLFVSNLSKERRAFV---------------------------------------------------- 215 (468)
T ss_pred chHHHHHHHHHHHHHHHHHhcccccccc----------------------------------------------------
Confidence 5555443333332222222222110000
Q ss_pred hhhhcccccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchh
Q 008210 251 MAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVR 330 (574)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (574)
+++.. .++.. . .. ....... +..
T Consensus 216 ---------------~~~~~---------------------~~~~~---~---------~~-~~~~~~~-------~~~- 238 (468)
T TIGR00788 216 ---------------RPRIG---------------------TYLEM---N---------MA-LLTLGVL-------ANV- 238 (468)
T ss_pred ---------------ccccc---------------------ccchh---h---------hh-hhhhhHH-------HHH-
Confidence 00000 00000 0 00 0000000 000
Q ss_pred hhccCCCCCCCccHHHhhhchhHHHHHHHHHh--hcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhh
Q 008210 331 RKKRRPKRGEDFKFTEAVVKADFWLLFLVYFA--GVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGV 406 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~ 406 (574)
++ .....++.+++|.+|......++ ..........+. ...+.+|++ ..+......+++.+++..+.++
T Consensus 239 -~~------~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~ 310 (468)
T TIGR00788 239 -KV------QILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDR 310 (468)
T ss_pred -HH------HHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 00 01234566788887764333333 222111111111 111245664 5566777777888888888888
Q ss_pred hhhhhhccccCchhhHHHHHHHHHHHHHHHH----h-------cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccch
Q 008210 407 VSEHFVRKTIPRTIWMTCTQVIMIITYLLFA----S-------SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHF 475 (574)
Q Consensus 407 l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~----~-------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~ 475 (574)
+.+|++.| ..+.++.++..++..... . .+.........+.+++.+..+.....++++..|++..
T Consensus 311 ~~~~~~~r-----~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~e 385 (468)
T TIGR00788 311 FLKTFPYR-----LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCE 385 (468)
T ss_pred HHhhCCHH-----HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCce
Confidence 87777766 566666666666553321 0 1111333445677788888888888999999999999
Q ss_pred hhhhhhhhhhhhhHHHHHhHhHHHhhhhhhh
Q 008210 476 GLISNFLALGNPLAAFLFSGLLAGYIYDNEA 506 (574)
Q Consensus 476 g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~ 506 (574)
|+.+++.+...++|.. +++.+.|.+.+..+
T Consensus 386 gt~~al~~s~~~lg~~-v~~~~gg~l~~~~g 415 (468)
T TIGR00788 386 SSVFALLASILHLGSS-VSGFLGVLLMETIG 415 (468)
T ss_pred ehHHHHHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 9999999999999998 89999999988754
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.66 E-value=3.5e-14 Score=145.05 Aligned_cols=184 Identities=13% Similarity=0.085 Sum_probs=131.6
Q ss_pred cHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhh----CCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhcccc
Q 008210 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ----GVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTI 416 (574)
Q Consensus 343 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~ 416 (574)
...+.+|+|++|.+.+...........+-...+.|.+.+ +.+ .-+.+.+.-.+.+++......++.+|+|.|
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-- 289 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-- 289 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH--
Confidence 346889999999987766554443333333345555442 222 235677788888999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhh-hhhhhhHHHHHh
Q 008210 417 PRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFL-ALGNPLAAFLFS 494 (574)
Q Consensus 417 ~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~lg~~~~g 494 (574)
..+.++..++.+=....... ++..+.+.-.+=++-.+.......-++++.+|+|..++.+.+. +.+.+++.. +.
T Consensus 290 ---~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~-i~ 365 (412)
T PF01306_consen 290 ---NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGII-IL 365 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHH-HH
T ss_pred ---hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHH-HH
Confidence 77777777777766666544 4445666667777777776677778999999999999999985 678889988 66
Q ss_pred HhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 008210 495 GLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 495 p~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (574)
+.++|.++|+. |++.+|++++.+.+...+++.+..++.
T Consensus 366 s~~~G~lyd~~---------------------G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 366 SPLAGYLYDRI---------------------GFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred hhhHHhhHhhc---------------------CcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 77999999995 588899998887777776666555443
No 110
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.64 E-value=5.3e-14 Score=148.95 Aligned_cols=340 Identities=14% Similarity=0.100 Sum_probs=215.8
Q ss_pred hHHHHhhhCCCHHHHHHHHH-HHHhhhhccccchhccc----cCCChH-HHHHHHHHHHHHHHHHHHH-HhhccCChhHH
Q 008210 35 SHSLKSVLGFNQHQLTMLGV-ANDIGENVGLLPGLASN----KFPPWL-VLFIGSLACFFGYGVLWLA-VSRTVESLPYW 107 (574)
Q Consensus 35 ~~~l~~~l~~s~~~~~~i~~-~~~~~~~~~~~~G~l~d----r~G~r~-~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~~ 107 (574)
.+.+.+.+|++...++.+.. .-....+..|+.|.++| |+|||+ .+++|.+++.+++.+++.. ...........
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 45667888999999999544 44455566999999999 899666 4556888888887665433 11121111233
Q ss_pred HHHHHHHHHHhhhHhhhhHHHHHHHhhCC--CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 008210 108 LLWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (574)
Q Consensus 108 ~l~~~~~l~G~g~g~~~~~~~~~~~~~fp--~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (574)
.+++..++..++......+-..+..+..+ ++|.+..++-..+..+|..+.+.+...+....
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~----------------- 167 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWF----------------- 167 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh-----------------
Confidence 44666677788888888777888888886 47999999888877777755544444332100
Q ss_pred HHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhccc
Q 008210 186 VMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRK 265 (574)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (574)
++ .+....+.. ...+..++..+... ......
T Consensus 168 -------------g~-~~~~~~~~~--~~~v~~iv~~v~~~--------------------------i~~~~~------- 198 (428)
T PF13347_consen 168 -------------GG-GDTSNGYRW--MALVLAIVGLVFFL--------------------------ITFFFV------- 198 (428)
T ss_pred -------------cc-CccchHHHH--HHHHHHHHHHHHhh--------------------------hhhhee-------
Confidence 00 000001111 10000000000000 000001
Q ss_pred CCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHH
Q 008210 266 RTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFT 345 (574)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (574)
||++ +++ + + ++ ++......++
T Consensus 199 ke~~-----------------------~~~----~------------~------------------~~--~~~~~~~~~~ 219 (428)
T PF13347_consen 199 KERS-----------------------VEV----T------------E------------------QE--KKISLRDSLR 219 (428)
T ss_pred eecc-----------------------ccc----c------------c------------------cc--cccccccchh
Confidence 1100 000 0 0 00 1111223457
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc-hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHH
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH-DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMT 423 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~ 423 (574)
+.+|+|.++.+....++............+++.+. .|.+ ..+.......+...++.+++++++||+|+| ..+.
T Consensus 220 ~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~ 294 (428)
T PF13347_consen 220 SLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYI 294 (428)
T ss_pred hhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehh
Confidence 78899998888887777655555445556666665 4553 445666678899999999999999999999 4566
Q ss_pred HHHHHHHHHHHHHHh---cCchHHHHHHHHHhhhccchhhhHHHHHHhhcC-------ccchhhhhhhhhhhhhhHHHHH
Q 008210 424 CTQVIMIITYLLFAS---SIDGTLYAATALLGICYGVQFSIMIPTVSELFG-------LEHFGLISNFLALGNPLAAFLF 493 (574)
Q Consensus 424 ~~~~~~~i~~~~~~~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~lg~~~~ 493 (574)
.+.++.+++.+++.. .+....++...+.|++.+..+....++.+|..+ .++.|..+|+.+....++.. +
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~-l 373 (428)
T PF13347_consen 295 IGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQG-L 373 (428)
T ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHH-H
Confidence 666666666665543 245577788889999999998888888888764 45679999999999999998 8
Q ss_pred hHhHHHhhhhhh
Q 008210 494 SGLLAGYIYDNE 505 (574)
Q Consensus 494 gp~l~g~l~~~~ 505 (574)
++.+.|.+.+..
T Consensus 374 a~~i~g~~l~~~ 385 (428)
T PF13347_consen 374 AGAIVGLLLALV 385 (428)
T ss_pred HHHHHHHHHHHh
Confidence 898999888764
No 111
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.62 E-value=1.3e-12 Score=138.41 Aligned_cols=182 Identities=19% Similarity=0.220 Sum_probs=135.0
Q ss_pred cHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHH-hhCCch--hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCch
Q 008210 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVHD--TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRT 419 (574)
Q Consensus 343 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~ 419 (574)
++++..|.|+...+.+..++..-+...++.....|.+ ++|+++ .........+..++|.+++|++.||+|.|.. +
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~-~- 350 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK-R- 350 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-H-
Confidence 4566777888888777777655444445555555665 478864 3445567788899999999999999999821 1
Q ss_pred hhHHHHHHHHHHHHHHHH--------hcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHH
Q 008210 420 IWMTCTQVIMIITYLLFA--------SSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAF 491 (574)
Q Consensus 420 ~~~~~~~~~~~i~~~~~~--------~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 491 (574)
.++........+++..+. ..+.+..++..++.|++.|+..+..-++.+++.|+++.+.-+|++.+.+...+.
T Consensus 351 ~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~ 430 (477)
T PF11700_consen 351 TLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSW 430 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 222222222233333222 334567888899999999999999999999999999999999999999999998
Q ss_pred HHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 492 LFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 492 ~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
+||.+.|.+.|.++ +.+.++....++.++++++.+
T Consensus 431 -lGPll~g~i~~~tg--------------------~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 431 -LGPLLFGLITDATG--------------------SQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred -HHHHHHHHHHHHhC--------------------CchhHHHHHHHHHHHHHHHHh
Confidence 99999999999962 478888888887777766553
No 112
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.58 E-value=1e-13 Score=135.96 Aligned_cols=110 Identities=15% Similarity=0.038 Sum_probs=90.8
Q ss_pred HHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhH
Q 008210 48 QLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTA 126 (574)
Q Consensus 48 ~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~ 126 (574)
-.+.+++.+++.-.+ ++.+|.++||+|||+++++|++..++.+++.+.+ .+|..++..|++.|+.-|.. ..
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S-------~~F~afv~aR~l~Gi~kgnl-~v 140 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS-------RNFAAFVLARFLGGIFKGNL-SV 140 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhhhhccCch-HH
Confidence 345677777777765 9999999999999999999999888876553332 46744555699999999877 46
Q ss_pred HHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 127 VLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 127 ~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
+.++++|.++ |+|+++++.+...+++|-+++|.+++.+.
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla 180 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLA 180 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHH
Confidence 8889999996 79999999999999999999999888763
No 113
>PRK11462 putative transporter; Provisional
Probab=99.57 E-value=2.7e-12 Score=136.84 Aligned_cols=124 Identities=9% Similarity=-0.033 Sum_probs=85.3
Q ss_pred HHHHhhhCCCHHHHHHH-HHHHHhhhhccccchhcccc----CCChH-HHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 36 HSLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASNK----FPPWL-VLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 36 ~~l~~~l~~s~~~~~~i-~~~~~~~~~~~~~~G~l~dr----~G~r~-~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
..+.+.+|++...++++ ...-..-.+.-|+.|.++|| +|||+ -+++|.+.+.+++.+++... ....+..+..+
T Consensus 34 ~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p-~~s~~~~~~y~ 112 (460)
T PRK11462 34 FFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP-DLSMNGKMIYA 112 (460)
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC-CCCcchHHHHH
Confidence 44567889999999995 44445556679999999996 68764 55667788888866654321 11111113344
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCC--CCcchHHHHHHhhhhhHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEI 160 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp--~~rg~a~gi~~~~~~~g~~i~~~i 160 (574)
.+..++..++..+...+-..+..+.-+ ++|.+..++-..+..+|..+.+.+
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~ 165 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVL 165 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666788888877766677777775 589999999888877776665444
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.53 E-value=4.6e-11 Score=120.22 Aligned_cols=366 Identities=16% Similarity=0.117 Sum_probs=223.5
Q ss_pred hHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccCC-----ChHHHHH-HHHHHHHHHHHHHHHHhhccC------
Q 008210 35 SHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFP-----PWLVLFI-GSLACFFGYGVLWLAVSRTVE------ 102 (574)
Q Consensus 35 ~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~G-----~r~~~~~-g~~~~~~g~~~~~~~~~~~~~------ 102 (574)
...+..|++++..-.+.....-.+...+.+..|+.+|+.+ ||.-+++ |.++++.+..++.....-...
T Consensus 3 NRVMIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 3 NRVMIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred chhHHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 3456788998888888755555566667999999999999 7765544 555656554444333222222
Q ss_pred -ChhHHHH--HHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccCCh-hHHHHHHH
Q 008210 103 -SLPYWLL--WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSS-SKLLLVLA 177 (574)
Q Consensus 103 -~~~~~~l--~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~-~~~~~~~~ 177 (574)
+...+.. .+...+.|+|.+....+-...+.|.-| ++|+++.++.+...-+|.++.+.+.+.+++..+ .+..-.+.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~ 162 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQ 162 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 2223333 345777899999888888889999997 689999999999988888888877777755421 12221111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhccc
Q 008210 178 VGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIP 257 (574)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (574)
....+. +.+ -+.+.
T Consensus 163 ~~a~i~-------------------------------------~~l-------------------------~~ia~---- 176 (403)
T PF03209_consen 163 GVALIA-------------------------------------LLL-------------------------NLIAL---- 176 (403)
T ss_pred HHHHHH-------------------------------------HHH-------------------------HHHHH----
Confidence 111100 000 00000
Q ss_pred ccchhcccCCcccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCC
Q 008210 258 VKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPK 337 (574)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (574)
+. .|+++. ..++ . + + + |+
T Consensus 177 ----wg--~E~r~~--------------------~~~~----~---------~--~-------------------~--~~ 194 (403)
T PF03209_consen 177 ----WG--QEPRRS--------------------RRAA----A---------A--E-------------------R--PR 194 (403)
T ss_pred ----Hh--cccCCc--------------------cccc----C---------C--C-------------------C--CC
Confidence 00 011000 0000 0 0 0 0 11
Q ss_pred CCCCccHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhh-hhc
Q 008210 338 RGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEH-FVR 413 (574)
Q Consensus 338 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr-~g~ 413 (574)
+.....+++...+|+...++...+..+.+.++--..+-+|..+ +|++ +++.+......+..+|..+.|++..| .++
T Consensus 195 ~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~ 274 (403)
T PF03209_consen 195 PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGK 274 (403)
T ss_pred ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 1112344566667766555555554433322222223344433 6774 66778888889999999999988874 333
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHh----cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhH
Q 008210 414 KTIPRTIWMTCTQVIMIITYLLFAS----SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLA 489 (574)
Q Consensus 414 r~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 489 (574)
+ .....+.....+++.++.. .+.+.+....+++|++.|.........+.+...+++.|..+|....++.++
T Consensus 275 ~-----~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 275 K-----RTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred h-----HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 3 2333444444444444332 234567788899999999988888888999999999999999999999999
Q ss_pred HHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHH
Q 008210 490 AFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSIL 545 (574)
Q Consensus 490 ~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (574)
.. ++..+.|.+.|.......+ .-..+|...|.+=++..++++.+
T Consensus 350 ~G-lg~~~GG~~~D~~~~~~~~-----------~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 350 RG-LGTFLGGALRDLVRALFGN-----------SPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HH-HHHHHHHHHHHHHHHhccC-----------CcchHHHHHHHHHHHHHHHHHHH
Confidence 98 8999999999975332210 00125777777666655555443
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.47 E-value=7.9e-11 Score=120.79 Aligned_cols=367 Identities=15% Similarity=0.073 Sum_probs=217.9
Q ss_pred hCCCHHHHHH-HHHHHHhhhhccccchhcccc-CCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhh
Q 008210 42 LGFNQHQLTM-LGVANDIGENVGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNS 119 (574)
Q Consensus 42 l~~s~~~~~~-i~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 119 (574)
+|+++++..- ++++..+.++...++|+++|| .|+|+++.+|.+++.+|.+.+... + . .....+++.-++.++|
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~--~-~--~~~~gl~i~L~~I~iG 130 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAIS--S-V--SGPGGLYIGLALIIVG 130 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcc--c-c--ccccHHHHHHHHHHhc
Confidence 4498888755 788888888999999999999 699999999999999998774332 1 0 1245778887888899
Q ss_pred hHhhhhHHHHHHHhhCCC---CcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 008210 120 SAWLGTAVLVTNMRNFPL---SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTP 196 (574)
Q Consensus 120 ~g~~~~~~~~~~~~~fp~---~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (574)
.|..-+....++.+.+|+ +|-...++...+-++|+.+.|.+...+-.+..|..-+..+.+-...+++..+..|..-.
T Consensus 131 ~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~ 210 (498)
T COG3104 131 TGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVK 210 (498)
T ss_pred cccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhc
Confidence 999999999999999973 46667777888888999998888888877777888887777777777766665553322
Q ss_pred CCCCC-CCCCcchhhH--HHHHHHHHHHHHH-HhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCccccc
Q 008210 197 ASGED-SAAPSHFLFT--QAASVVLGFFLLT-TTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGI 272 (574)
Q Consensus 197 ~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (574)
..... +..+...... ....+........ +.. ...+..+....++.+......+.... +
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~i~~~~~~~~~~~----~--------- 272 (498)
T COG3104 211 GIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLL-----LNQNTFSGVLLVISILIAIIYFAEAF----R--------- 272 (498)
T ss_pred CCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHh----c---------
Confidence 21111 1111111111 1111111111110 000 01122222222222211111111000 0
Q ss_pred ccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhhhchh
Q 008210 273 LDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKAD 352 (574)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (574)
. ++.. ++ + ++++.
T Consensus 273 ---------------------~------------------~~~~-----------~e--r------------~r~~~--- 285 (498)
T COG3104 273 ---------------------S------------------PKVF-----------DE--R------------RRLLA--- 285 (498)
T ss_pred ---------------------c------------------CccH-----------HH--H------------HHHHH---
Confidence 0 0000 00 0 11111
Q ss_pred HHHHHHHHHhhcccceeeeccHHHHHHh------hCCc-hhhHHHHHHHHHHhhhhhhhhhhhhhhhcc--ccCchhhHH
Q 008210 353 FWLLFLVYFAGVGSGVTVLNNLAQIGIA------QGVH-DTTILLSLFSFCNFVGRLGGGVVSEHFVRK--TIPRTIWMT 423 (574)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~-~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r--~~~~~~~~~ 423 (574)
+..+++.....+.......+.+..+.++ .|++ +..+..+...+.-++..|+..++-.|++++ ..+...-+.
T Consensus 286 ~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFa 365 (498)
T COG3104 286 AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFA 365 (498)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHH
Confidence 1111111111111112222333333322 2343 567788888888888888889988886666 222233455
Q ss_pred HHHHHHHHHHHHHHh-----c--C----chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHH
Q 008210 424 CTQVIMIITYLLFAS-----S--I----DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFL 492 (574)
Q Consensus 424 ~~~~~~~i~~~~~~~-----~--~----~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 492 (574)
++..++..+++++.. . + ...++...++.+++--..-|.-..++.+..|++-.+.+++........+..
T Consensus 366 lGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~- 444 (498)
T COG3104 366 LGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQT- 444 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-
Confidence 666677777665442 1 1 236677788888887777788889999999998899999987777777766
Q ss_pred HhHhHHH
Q 008210 493 FSGLLAG 499 (574)
Q Consensus 493 ~gp~l~g 499 (574)
++..+.+
T Consensus 445 l~g~va~ 451 (498)
T COG3104 445 LGGQVAG 451 (498)
T ss_pred hhceecc
Confidence 4554554
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.46 E-value=2.8e-11 Score=125.11 Aligned_cols=339 Identities=13% Similarity=0.092 Sum_probs=198.7
Q ss_pred HHHhhhCCCHHHHHHH-HHHHHhhhhccccchhcccc----CCC-hHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 008210 37 SLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASNK----FPP-WLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (574)
Q Consensus 37 ~l~~~l~~s~~~~~~i-~~~~~~~~~~~~~~G~l~dr----~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (574)
.+.+.+|++...++.+ ...=.+-++.-|+.|.+.|| +|| |+-++.|.+.+++.+.+++.... +.........+
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~-~~~~~k~~ya~ 116 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD-FSMTGKLIYAL 116 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC-cccCcchHHHH
Confidence 3567899999999984 44445556669999999997 554 45677788888888877665532 11112345566
Q ss_pred HHHHHHHhhhHhhhhHHHHHHHhhCC--CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHH
Q 008210 111 IALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMM 188 (574)
Q Consensus 111 ~~~~l~G~g~g~~~~~~~~~~~~~fp--~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (574)
+-..+.+++...+..+-..+..+.-+ ++|.+..++-..+..+|..+...+...+.. .
T Consensus 117 vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~------------------~--- 175 (467)
T COG2211 117 VTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVK------------------L--- 175 (467)
T ss_pred HHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------H---
Confidence 77888899999888766667777764 689998998888877776555443322211 0
Q ss_pred HhcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhcccCCCchhhhhhHHHHHHHHHhhhhcccccchhcccCCc
Q 008210 189 YFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTS 268 (574)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (574)
+ . + ++....+.. .+. .+++..+ +..+... +.-|||
T Consensus 176 --~---g----~-~~~~~g~~~--~~~-~~~vi~~---------------------------i~~l~~~-----~~v~ER 210 (467)
T COG2211 176 --F---G----G-GDKALGYQG--TAL-VLGVIGV---------------------------ILLLFCF-----FNVKER 210 (467)
T ss_pred --h---C----C-CcchhhHHH--HHH-HHHHHHH---------------------------HHHHHHH-----HHhhcc
Confidence 0 0 0 011111111 110 0000000 0000000 000111
Q ss_pred ccccccCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhccchhhhccCCCCCCCccHHHhh
Q 008210 269 ESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAV 348 (574)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (574)
.. ++++ . ++ . .+.+....+...+
T Consensus 211 ~~---------------------~~~~----~------------~~------------------~--~~~~~~~~~~~~~ 233 (467)
T COG2211 211 VV---------------------ETQP----T------------KT------------------G--VKLKLKDSFLLIF 233 (467)
T ss_pred cC---------------------cccc----C------------cc------------------c--ccccHHHHHHHHH
Confidence 00 0000 0 00 0 0001111234567
Q ss_pred hchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHH
Q 008210 349 VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCT 425 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~ 425 (574)
+++.+..+.+..++...+.........+|.+. +|.+ ...........+..++.+++.++.+|+|+| .++..+
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~ 308 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIG 308 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHH
Confidence 88887766665544433222211122222222 3443 233455556666667799999999999999 667777
Q ss_pred HHHHHHHHHHHHhcC--c-hHHHHHHHHHhhhccchhhhHHHHHHhh-------cCccchhhhhhhhhhhhhhHHHHHhH
Q 008210 426 QVIMIITYLLFASSI--D-GTLYAATALLGICYGVQFSIMIPTVSEL-------FGLEHFGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 426 ~~~~~i~~~~~~~~~--~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~-------~~~~~~g~~~g~~~~~~~lg~~~~gp 495 (574)
.++..++..++.+.. . ...++...+.+++.+...+...++++|. .+.+.-|..+|...+..-+|.. ++.
T Consensus 309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~a-la~ 387 (467)
T COG2211 309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLA-LAG 387 (467)
T ss_pred HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHH-HHH
Confidence 777777777665432 2 2445555777888888888888888776 4666789999999999999988 788
Q ss_pred hHHHhhhhhh
Q 008210 496 LLAGYIYDNE 505 (574)
Q Consensus 496 ~l~g~l~~~~ 505 (574)
.+.|++.+..
T Consensus 388 ~~~g~~L~~~ 397 (467)
T COG2211 388 FIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHc
Confidence 8888888764
No 117
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.40 E-value=7.4e-11 Score=118.40 Aligned_cols=177 Identities=18% Similarity=0.192 Sum_probs=128.7
Q ss_pred cHHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHH-hhCCch--hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCch
Q 008210 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVHD--TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRT 419 (574)
Q Consensus 343 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~ 419 (574)
++++..++++...+.+..++..=+..........+.. ++|+++ ...+.....+..++|.++.|+|.||+|.|
T Consensus 244 t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k----- 318 (438)
T COG2270 244 TFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK----- 318 (438)
T ss_pred HHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----
Confidence 4566666667666666655543333344444555555 478854 44555667788999999999999999999
Q ss_pred hhHHHHHHHHHHHH-HHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH
Q 008210 420 IWMTCTQVIMIITY-LLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA 498 (574)
Q Consensus 420 ~~~~~~~~~~~i~~-~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~ 498 (574)
.++..+.++..+.. ..+....+...++...++|+..|+..+..=.+..+..|+++-+..+|+++..+...+. +||.+.
T Consensus 319 ~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~-~gp~lv 397 (438)
T COG2270 319 PVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASF-LGPFLV 397 (438)
T ss_pred eeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHH-HHHHHH
Confidence 34444444444433 3333344557778889999999999999999999999999999999999999999998 999999
Q ss_pred HhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHH
Q 008210 499 GYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSIL 545 (574)
Q Consensus 499 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (574)
+.+.+.++ +-+..+....++..+++++
T Consensus 398 ~v~t~iTg--------------------~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 398 AVITQITG--------------------SSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred HHHHHHhc--------------------chhhHHHHHHHHHHhhHhh
Confidence 99999873 3566666666665665543
No 118
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.34 E-value=1.2e-11 Score=131.18 Aligned_cols=169 Identities=14% Similarity=0.125 Sum_probs=130.0
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM 429 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 429 (574)
.++...+..++.......+....|.+.+++|.+ +.++..+.+.++..++.+..|++.||+||| .++.++.++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~~~ 98 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHHHH
Confidence 344444455444443344456678888888885 567888899999999999999999999999 5677777777
Q ss_pred HHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhh
Q 008210 430 IITYLLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAK 508 (574)
Q Consensus 430 ~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~ 508 (574)
.++.++....++ ..+++...+.|++.|..++....++.|.+|+++++.++|+.+.+..+|+. ++|.+.+++.+..
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~~--- 174 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA-LIPLVVGAIALHY--- 174 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcc---
Confidence 777766654433 35556667788888888888889999999999999999999999999998 8999999998763
Q ss_pred hcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 509 QQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
+|+..|++.++.+++..+...
T Consensus 175 ------------------gw~~~f~~~~i~~~~~~~~~~ 195 (434)
T PRK11663 175 ------------------GWRYGMMIAGIIAIVVGLFLC 195 (434)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 599999887766555444333
No 119
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=3.1e-11 Score=122.25 Aligned_cols=173 Identities=21% Similarity=0.203 Sum_probs=152.8
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM 429 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 429 (574)
..+.+.++.|+....++.....+|++.++++++ .++..++.+..+..++.|+...+.||+.|| .++...+.+.
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr-----~lLl~~l~lF 88 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR-----RLLLGLLALF 88 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH-----HHHHHHHHHH
Confidence 456777777777778888888999999999995 578899999999999999999999999999 6777778888
Q ss_pred HHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhh
Q 008210 430 IITYLLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAK 508 (574)
Q Consensus 430 ~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~ 508 (574)
.++-++.....+ ..+.+..++.|+..|..++....+..++.|+++++++.++++++..++.. +|.++..++-|..
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v-~GvPLGt~ig~~~--- 164 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATV-LGVPLGTFLGQLF--- 164 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHH-HhccHHHHHHHHh---
Confidence 888888776544 47788999999999999999999999999999999999999999999998 8999999999984
Q ss_pred hcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 509 QQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
+||.+|+..+.+++++.+..+...+
T Consensus 165 ------------------GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 165 ------------------GWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6999999999999888877766666
No 120
>PRK10504 putative transporter; Provisional
Probab=99.29 E-value=3.2e-11 Score=129.36 Aligned_cols=173 Identities=16% Similarity=0.231 Sum_probs=136.3
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM 429 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 429 (574)
.+|.++.+.++.......+....|.+.+++|.+ +.++..+.+.++..++.+++|+++||+||| .++..+.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~ 85 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTAIVLF 85 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHHHH
Confidence 567777777776555555667789999999886 456777888899999999999999999999 4555555566
Q ss_pred HHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhh
Q 008210 430 IITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAK 508 (574)
Q Consensus 430 ~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~ 508 (574)
.++.++.... +...+++...+.|++.+...+....++.|.+|+++++.++|+......++.. ++|.+.|.+.|..
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~g~l~~~~--- 161 (471)
T PRK10504 86 TLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPL-LGPALGGLLVEYA--- 161 (471)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHhhc---
Confidence 6655554443 3446677888999999998898899999999999999999999999999998 8999999998873
Q ss_pred hcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 509 QQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
+|+..|++....+.++.++.....+
T Consensus 162 ------------------gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 162 ------------------SWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5899999887777666655544433
No 121
>PRK10054 putative transporter; Provisional
Probab=99.28 E-value=4.4e-11 Score=125.21 Aligned_cols=173 Identities=11% Similarity=0.019 Sum_probs=127.0
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHH-hhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVI 428 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 428 (574)
+++.+.+..++...+......+++.+.+ ++|++ +.++..+...+...++.+..|+++||+||| .++..+.+.
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~~ 82 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAITA 82 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHHH
Confidence 4566666666655554555666777665 47885 567888888899999999999999999999 556666666
Q ss_pred HHHHHHHHHhcCch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhh
Q 008210 429 MIITYLLFASSIDG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAA 507 (574)
Q Consensus 429 ~~i~~~~~~~~~~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~ 507 (574)
..++.+++...+.. .+++...+.|.+.+...+....+..|.+|+++++++.|+.+...++|.. ++|.+.+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~-igp~l~~~l~~~--- 158 (395)
T PRK10054 83 FASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWT-VGPPLGTLLVMQ--- 158 (395)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh---
Confidence 66666655544333 3444455666666666677788899999999999999999999999998 899999988743
Q ss_pred hhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 508 KQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+|+..|++.+++.+++.+...+..+|
T Consensus 159 -------------------g~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 159 -------------------SINLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred -------------------ccCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 48888988877777765544443333
No 122
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.27 E-value=2e-11 Score=125.08 Aligned_cols=154 Identities=23% Similarity=0.262 Sum_probs=124.0
Q ss_pred eeccHH-HHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-cCchHHH
Q 008210 370 VLNNLA-QIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-SIDGTLY 445 (574)
Q Consensus 370 ~~~~~~-~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~ 445 (574)
.....+ .+.+++|.+ +.++..+...++..++.+..|+++||+||| ..+..+.++..++.++... .+.+.++
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~~ 89 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSLLLAFASNFWLLL 89 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHHHhhhhhhHHHHh
Confidence 344555 555667764 567888899999999999999999999999 6777777777777444443 4445677
Q ss_pred HHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCC
Q 008210 446 AATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGP 525 (574)
Q Consensus 446 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 525 (574)
+..++.|++.+...+....++.|.+|+++|+.+.|+......+|.. ++|.+.+.+.+..
T Consensus 90 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~-------------------- 148 (352)
T PF07690_consen 90 IARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSI-LGPLLGGFLISYF-------------------- 148 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHC--------------------
T ss_pred hhccccccccccccccccccccccchhhhhhhccccccchhhhhhh-cccchhhhhhhcc--------------------
Confidence 8889999999999999999999999999999999999999999998 8999999998763
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 526 NCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
+|+..|++.+++.+++.++...+.
T Consensus 149 -~~~~~~~~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 149 -GWRWAFLISAILSLIAAILFILFL 172 (352)
T ss_dssp -HHCCHHHHHHHHHHHHHHHHHCCC
T ss_pred -ccccccccccchhhhhhhhHhhhh
Confidence 588899999888888766433333
No 123
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.26 E-value=7.3e-11 Score=122.74 Aligned_cols=158 Identities=20% Similarity=0.136 Sum_probs=126.6
Q ss_pred eeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHH
Q 008210 368 VTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTL 444 (574)
Q Consensus 368 ~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l 444 (574)
.......|.+.+++|.+ +.++..+.+.++..++.+++|++.||+||| ..+..+.++..++.++....+ ...+
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSNNIETL 96 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 34455678888888885 567888899999999999999999999999 566667777777776665443 3466
Q ss_pred HHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccC
Q 008210 445 YAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLG 524 (574)
Q Consensus 445 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (574)
++...+.|++.+...+....++.|.+|+++++++.|+.+....++.. ++|.+.+.+.+..
T Consensus 97 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~------------------- 156 (385)
T TIGR00710 97 LVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPA-VAPLLGGYILVWL------------------- 156 (385)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHc-------------------
Confidence 67788889999988898999999999999999999999999999998 8999999988763
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 525 PNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+|+..|++.+++.+++.+..+...++
T Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 157 --SWHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 58888888877776665555444433
No 124
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.25 E-value=7.1e-11 Score=123.10 Aligned_cols=170 Identities=15% Similarity=0.119 Sum_probs=133.7
Q ss_pred hhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHH
Q 008210 351 ADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVI 428 (574)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 428 (574)
+.++.+.+..+............+|.+.+++|.+ +.++..+...++..++.+.+|+++||+||| +.+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~ 77 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFLVAL 77 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHHHHH
Confidence 3455555555554444444556778888888885 567888999999999999999999999999 677777777
Q ss_pred HHHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhh
Q 008210 429 MIITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAA 507 (574)
Q Consensus 429 ~~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~ 507 (574)
.+++.++....+ ...+++..++.|++.+...+....++.|.+++++++.+.|+...+..++.. ++|.+.+.+.+..
T Consensus 78 ~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~-- 154 (382)
T PRK10091 78 CVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANL-LGIPLGTYLSQEF-- 154 (382)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHH-HhccHHHHHhhhc--
Confidence 777777766544 456777889999998888888888899999999999999999999999998 8999999888763
Q ss_pred hhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 508 KQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
+|+..|++.++..++..+..+
T Consensus 155 -------------------gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 155 -------------------SWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 589999988876666554443
No 125
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.24 E-value=1.1e-10 Score=122.11 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=122.9
Q ss_pred eeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHH
Q 008210 369 TVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLY 445 (574)
Q Consensus 369 ~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~ 445 (574)
.....+|.+.+++|.+ +.++..+...++..+++++.|++.||+||| ..+..+.++.+++.++....+ ...++
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 112 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR-----YVVILFAVLLTLSCLLVSFANSFSLLL 112 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH-----HHHHHHHHHHHHHHHHHHHHChHHHHH
Confidence 3344677888888885 457788889999999999999999999999 667777777777776655443 45777
Q ss_pred HHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCC
Q 008210 446 AATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGP 525 (574)
Q Consensus 446 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 525 (574)
+...+.|++.+...+....++.|.+|+|+++.+.++...+.+++.. ++|.+.+.+.+..
T Consensus 113 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~-ig~~l~~~l~~~~-------------------- 171 (394)
T PRK10213 113 IGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALV-IAAPLGSFLGELI-------------------- 171 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhc--------------------
Confidence 8889999999998899999999999999999999999999999998 8999999998873
Q ss_pred ccchhHHHHHHHHHHHHHH
Q 008210 526 NCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~ 544 (574)
+|+..|++.+++++++.+
T Consensus 172 -gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 172 -GWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred -CHHHHHHHHHHHHHHHHH
Confidence 589999887766655443
No 126
>PRK03545 putative arabinose transporter; Provisional
Probab=99.24 E-value=9.3e-11 Score=122.57 Aligned_cols=150 Identities=17% Similarity=0.163 Sum_probs=122.2
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHH
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAAT 448 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 448 (574)
..+|.+.+++|.+ +.++..+.+.++..++.+..|.+.||+||| +++..+.+...++.++.... +...+++..
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 104 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR-----KLLIGLFVLFIASHVLSALAWNFTVLLISR 104 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3467888888885 567788889899999999999999999999 67777777777776666544 344667777
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
.+.|++.+..++....++.|.+|+++|+++.|+...+..++.. ++|.+.+.+.+.. +|
T Consensus 105 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~-ig~~l~~~l~~~~---------------------gw 162 (390)
T PRK03545 105 IGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMV-LGLPLGRVIGQYL---------------------GW 162 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHH-HHhhHHHHHHHHh---------------------cH
Confidence 8888888887888888999999999999999999999999998 8999999988763 59
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 008210 529 RITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~ 548 (574)
+..|++.++++++..+....
T Consensus 163 ~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 163 RTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999888877666544443
No 127
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=1.2e-10 Score=122.52 Aligned_cols=179 Identities=12% Similarity=0.145 Sum_probs=133.3
Q ss_pred HHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHH
Q 008210 353 FWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMI 430 (574)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~ 430 (574)
++..++.+++.......+....|.+.+++|.+ +.++..+.+.++..++.+..|+++||+||| +.+..+.++..
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~~ 84 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLWG 84 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHHH
Confidence 34444444444333333444556666778874 567888999999999999999999999999 66777777777
Q ss_pred HHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhh
Q 008210 431 ITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQ 509 (574)
Q Consensus 431 i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~ 509 (574)
++.++.... +...+++..++.|++.+...+....++.|.+|+++|+.+.|+.+....+|.. +++.+.+++.+...-
T Consensus 85 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~-- 161 (412)
T TIGR02332 85 IASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMA-LGLILSGYILALDGL-- 161 (412)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCC--
Confidence 777776654 4457778889999999998888888999999999999999999999999998 899899988753100
Q ss_pred cccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 510 QGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
.+..+|+.+|++.++..++..++.++..++
T Consensus 162 -------------~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 162 -------------MALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred -------------CCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 011369999998877766655555444444
No 128
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.22 E-value=1.4e-10 Score=123.09 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=123.2
Q ss_pred chhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHH
Q 008210 350 KADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQV 427 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 427 (574)
++.++...+...........+....|.+ ++.|.+ +.++..+.+.++..++.+..|+++||+||| ..+..+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~~~~ 99 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYL-VEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPAGLI 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHH-HHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHHHHH
Confidence 3444444444444333223233344444 445774 567888899999999999999999999998 44555556
Q ss_pred HHHHHHHHHHhc----Cc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 428 IMIITYLLFASS----ID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 428 ~~~i~~~~~~~~----~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
+..++.++.... +. ..+++..++.|++.|..++.....+.|.+|+++||++.|+.++...+++. ++|.+.+...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~l~~~~~ 178 (438)
T TIGR00712 100 LSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGG-IPPLLVLLGM 178 (438)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhH-HHHHHHHHHH
Confidence 666665544321 12 24456677888888888888888899999999999999999999999998 7887877655
Q ss_pred hhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 503 DNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+.. .+|+..|++.++.+++..+..++..++
T Consensus 179 ~~~--------------------~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 179 AWF--------------------NDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHh--------------------hhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 532 259999999888777766555555444
No 129
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.21 E-value=7.2e-11 Score=121.56 Aligned_cols=153 Identities=12% Similarity=0.072 Sum_probs=118.9
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-c-----Cc
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-S-----ID 441 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~-----~~ 441 (574)
....+|.+..+.+.+ +.++..+...++..++.+..|+++||+||| +.+..+.++..++..+... . +.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (365)
T TIGR00900 18 TQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLVAVLPFVALLGGLNI 92 (365)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 344566777777764 567788899999999999999999999999 5566555555554444332 2 34
Q ss_pred hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCccc
Q 008210 442 GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVS 521 (574)
Q Consensus 442 ~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~ 521 (574)
..+++...+.|++.+...+....++.|.+|+++|+++.|+.+....++.. ++|.+.+.+.+..
T Consensus 93 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~---------------- 155 (365)
T TIGR00900 93 WQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYI-VGPGIGGLMYATL---------------- 155 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHh----------------
Confidence 46677788889999988899999999999999999999999999999998 8999999998873
Q ss_pred ccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 522 CLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
+|+..|++.++..+++.+..+..
T Consensus 156 -----g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 156 -----GIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHhc
Confidence 58888888776666554444333
No 130
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.21 E-value=1.6e-10 Score=124.72 Aligned_cols=172 Identities=16% Similarity=0.137 Sum_probs=134.4
Q ss_pred HHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHH
Q 008210 354 WLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMII 431 (574)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i 431 (574)
..+.+..++.......+...+|.+.+++|.+ +.++..+.+.++..++.+.+|+++||+||| .++..+.++..+
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~~~ 83 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHH
Confidence 3344444554444444556688898888874 678888999999999999999999999999 677777778788
Q ss_pred HHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhc-CccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhh
Q 008210 432 TYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELF-GLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQ 509 (574)
Q Consensus 432 ~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~ 509 (574)
+.++....+ ...+++...+.|++.+...+.....+.+.+ |+++|+++.|+......+|.. +||.+.|++.++.
T Consensus 84 ~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~-~gp~lgg~l~~~~---- 158 (495)
T PRK14995 84 ASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAA-FGPLVGGILLEHF---- 158 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccC----
Confidence 777766544 456777889999998888777777776766 678999999999999999998 9999999998873
Q ss_pred cccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 510 QGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+|++.|++...++++++++.....++
T Consensus 159 -----------------gwr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 159 -----------------YWGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred -----------------ChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 69999998887777766655554443
No 131
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.21 E-value=1.4e-10 Score=124.06 Aligned_cols=167 Identities=17% Similarity=0.180 Sum_probs=133.5
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHh---hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhh-hhccccCchhhHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIA---QGVH--DTTILLSLFSFCNFVGRLGGGVVSEH-FVRKTIPRTIWMTCT 425 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr-~g~r~~~~~~~~~~~ 425 (574)
.+|.+....++...+......+++.|.++ +|++ +++...+.+.+...++.+++|+++|| +||| ..+..+
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~~ 85 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVLG 85 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHHH
Confidence 45666666666555556667778888765 5774 67788899999999999999999999 8999 677778
Q ss_pred HHHHHHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccc---hhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 426 QVIMIITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEH---FGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 426 ~~~~~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
.++..++.+++...+ ...+++...+.|++.|...+....++++.+|+++ ++.++++.+...++|+. +||.+.|++
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~-ig~~l~g~l 164 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF-ISPLLAGVI 164 (475)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH-HHHHHHHHH
Confidence 888888887776543 3456667778899999888999999999998764 88899999999999998 999999999
Q ss_pred hhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHH
Q 008210 502 YDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSIL 545 (574)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (574)
.++. +|+..|++.++..+++.+.
T Consensus 165 ~~~~---------------------g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 165 AENY---------------------GYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHhc---------------------ChHHHHHHHHHHHHHHHHH
Confidence 8873 5899998877665555433
No 132
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.20 E-value=6.7e-11 Score=122.89 Aligned_cols=154 Identities=19% Similarity=0.193 Sum_probs=122.3
Q ss_pred eccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHH
Q 008210 371 LNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAA 447 (574)
Q Consensus 371 ~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~ 447 (574)
....|.+.+++|.+ +.++..+...++..++.+..|+++||+||| ..+..+.+...++..+.... +...+++.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGAR-----KTLAVFIVIWGVFTGLQAFAGAYVSLYIL 88 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcc-----eeeHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 34456666777875 567888999999999999999999999999 45555666666665555543 44567778
Q ss_pred HHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCcc
Q 008210 448 TALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNC 527 (574)
Q Consensus 448 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (574)
..+.|++.+...+....++.|.+|+++|+.+.|+......+|.. ++|.+.+.+.+.. +
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~---------------------~ 146 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGI-IGGPLVGWILIHF---------------------S 146 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHH-HHHHHHHHHHHhC---------------------C
Confidence 88999999998999999999999999999999999999999998 8999999888773 5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhh
Q 008210 528 FRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
|+..|++.++..++..+..+...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 147 WQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred chHHHHHHHHHHHHHHHHhhheec
Confidence 888898887776665555444433
No 133
>PRK03699 putative transporter; Provisional
Probab=99.20 E-value=2.8e-10 Score=119.16 Aligned_cols=168 Identities=14% Similarity=0.091 Sum_probs=126.6
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM 429 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 429 (574)
.+|..+..+++...........+|.+.+++|++ +.++..+...++..++.+.+|++.||+||| ..+..+.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r-----~~~~~~~~~~ 82 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK-----RQLIFGFALM 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHH
Confidence 445555555554443344455678888888885 456788889999999999999999999999 5666666666
Q ss_pred HHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhh
Q 008210 430 IITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAK 508 (574)
Q Consensus 430 ~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~ 508 (574)
.++..+....+ ...+++...+.|++.+...+....++.|.+|+++|+.+.+..+....+++. ++|.+.+.+.+..
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~--- 158 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGM-IFPIIAAYLLARS--- 158 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcc---
Confidence 67666655543 345667778889988888888888999999999999999998888888887 8898888876542
Q ss_pred hcccccccCCcccccCCccchhHHHHHHHHHHHHHHH
Q 008210 509 QQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSIL 545 (574)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (574)
.+|+..|.+.++..++..++
T Consensus 159 -----------------~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 159 -----------------IEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHH
Confidence 35999998877766554433
No 134
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.19 E-value=3e-10 Score=122.39 Aligned_cols=174 Identities=17% Similarity=0.179 Sum_probs=127.5
Q ss_pred Hhhhch-hHHHHHHHHHhhcccceeeeccHHHHHH-hhCCch--hhHHHHHHHHHHhhhhhhhhhhhhh-hhccccCchh
Q 008210 346 EAVVKA-DFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVHD--TTILLSLFSFCNFVGRLGGGVVSEH-FVRKTIPRTI 420 (574)
Q Consensus 346 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr-~g~r~~~~~~ 420 (574)
+.+|+| .+|..+...++.......+..+++.+.+ ++|+++ +....+.+........+++|+++|| +||| .
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~ 89 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----R 89 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----H
Confidence 455666 4788777777766665566667777774 578853 4455555554555556789999999 5999 6
Q ss_pred hHHHHHHHHHHHHHHHHhc-Cc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccc--hhhhhhhhhhhhhhHHHHHhHh
Q 008210 421 WMTCTQVIMIITYLLFASS-ID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEH--FGLISNFLALGNPLAAFLFSGL 496 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~~~-~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~lg~~~~gp~ 496 (574)
.+..+.++..++..++... +. ..+++...+.|++.|...+....++.|.+|+++ ++.++++.+++.++|+. ++|.
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~-~gp~ 168 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF-FSML 168 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH-HHHH
Confidence 6777777777777666543 22 244556678889988888888899999998654 45688888999999998 9999
Q ss_pred HHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 497 LAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 497 l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
+.|++.|+. +|+..|++.++..+++.+..
T Consensus 169 i~g~l~~~~---------------------g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 169 ATPWLAAKY---------------------GWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHhh---------------------CHHHHHHHHHHHHHHHHHHH
Confidence 999998873 59999998776656655433
No 135
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=8.3e-11 Score=121.66 Aligned_cols=156 Identities=19% Similarity=0.180 Sum_probs=120.2
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 446 (574)
+....|.+.+++|.+ +.++..+...++..++.+..|+++||+||| +.+..+.++..++.++....+ ...+++
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGLILCAIVNLFFGFSTSLWVMAA 88 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 334456667777884 567888899999999999999999999999 566667777777776665443 446677
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHh-HHHhhhhhhhhhhcccccccCCcccccCC
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGL-LAGYIYDNEAAKQQGFNLLTSNVVSCLGP 525 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~-l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 525 (574)
...+.|++.+...+....++.|.+|+++|+.+.|+.+....+|.. ++|. +.+.+.+.
T Consensus 89 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~--------------------- 146 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGG-LLPPLVLFGIAEL--------------------- 146 (379)
T ss_pred HHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHH-HHHHHHHHHHHhc---------------------
Confidence 788889999988899999999999999999999999999999998 7884 55555444
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 526 NCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
.+|+..|++.+++.++..++.+...++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred CCchhHHHHHHHHHHHHHHHHheeeCC
Confidence 258888887777666655444444433
No 136
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.19 E-value=3.4e-10 Score=125.62 Aligned_cols=160 Identities=15% Similarity=0.076 Sum_probs=119.2
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHH
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAAT 448 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 448 (574)
..+|.+.+++|.+ +.+++.+.+.++.++|.+++|+++||+||| ..+.++.++.+++.++..+. +...+++..
T Consensus 188 ~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR-----~~lii~lil~~i~~ll~afa~s~~~llv~R 262 (742)
T TIGR01299 188 FVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK-----QCLLICLSVNGFFAFFSSFVQGYGFFLFCR 262 (742)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3456666777874 556788899999999999999999999999 56666666666666555543 344677788
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
++.|++.|+..+..+.++.|.+|++.||...+++.++..+|.. +++.++..+....+.... ....+...+|
T Consensus 263 ~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~i-la~~la~~il~~~G~~~~--------~g~~~~~~gW 333 (742)
T TIGR01299 263 LLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGI-YAAAMAWAIIPHYGWSFQ--------MGSAYQFHSW 333 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccchhc--------cccccccccH
Confidence 9999999999999999999999999999999999999999998 888777776654321100 0011223468
Q ss_pred hhHHHHHHHHHHHHHHH
Q 008210 529 RITFFVLAGVCCVGSIL 545 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~ 545 (574)
+..+++.++.+++++++
T Consensus 334 R~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 334 RVFVIVCAFPCVFAIGA 350 (742)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88887777665555443
No 137
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.19 E-value=1.4e-10 Score=124.74 Aligned_cols=157 Identities=14% Similarity=0.178 Sum_probs=128.0
Q ss_pred eeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHH
Q 008210 369 TVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLY 445 (574)
Q Consensus 369 ~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~ 445 (574)
......|.+.+++|.+ +.++..+.+.++..++.+..|+++||+||| ..+..+.++..++.++....+ ...++
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTLGSLLCGVAPNLELMI 94 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHhCcCCHHHHH
Confidence 3445678888888874 567888999999999999999999999999 667777777777777666443 34677
Q ss_pred HHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCC
Q 008210 446 AATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGP 525 (574)
Q Consensus 446 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 525 (574)
+...+.|++.+...+....++.|.+|+++|+.+.|+......++.. ++|.+.|++.++.
T Consensus 95 ~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~-------------------- 153 (485)
T TIGR00711 95 IFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPA-LGPTLGGWIIENY-------------------- 153 (485)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhh-hhhccHhHhccCc--------------------
Confidence 7888999999988899999999999999999999999999999998 8999999998873
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 526 NCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+|+..|++.+...+++.++.++..++
T Consensus 154 -~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 154 -HWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred -CceehhhhhhHHHHHHHHHHHHHcCC
Confidence 58999988877776666555544443
No 138
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.18 E-value=3.4e-10 Score=118.44 Aligned_cols=164 Identities=18% Similarity=0.156 Sum_probs=123.8
Q ss_pred HHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHH
Q 008210 354 WLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMII 431 (574)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i 431 (574)
...++..+.............+.+.+++|.+ +.++..+...++..++.++.|+++||+||| ..+..+.++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~~~~~~~~~~~ 89 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR-----LPMVTSIVLFSA 89 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHH
Confidence 3344444444333333445567777778885 567788899999999999999999999999 566666667667
Q ss_pred HHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhc
Q 008210 432 TYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQ 510 (574)
Q Consensus 432 ~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~ 510 (574)
+.++.... +...+++...+.|++.+...+....++.|.+|+++++.+.|+..+...+|.. +++.+.+.+.+..+
T Consensus 90 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~l~~~~~---- 164 (405)
T TIGR00891 90 GTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAV-VAAQVYSLVVPVWG---- 164 (405)
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC----
Confidence 66665543 3446677888999999998898899999999999999999999999999998 89989888877631
Q ss_pred ccccccCCcccccCCccchhHHHHHHHHHHHH
Q 008210 511 GFNLLTSNVVSCLGPNCFRITFFVLAGVCCVG 542 (574)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (574)
.+|+..|++.+...+++
T Consensus 165 ---------------~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 165 ---------------DGWRALFFISILPIIFA 181 (405)
T ss_pred ---------------ccHHHHHHHHHHHHHHH
Confidence 13888887655444443
No 139
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.17 E-value=4.4e-10 Score=118.05 Aligned_cols=154 Identities=17% Similarity=0.139 Sum_probs=118.8
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHH
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAAT 448 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 448 (574)
...|.+.+++|.+ +.++..+...++..++.+..|+++||+||| +.+..+.++..++.++.... +...+++..
T Consensus 36 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (406)
T PRK11551 36 VAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK-----RILIVSVALFGLFSLATAQAWDFPSLLVAR 110 (406)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----hhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3456777888885 567888899999999999999999999999 55666666666665554433 344667778
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
.+.|++.+...+....++.|.+|+++++++.|+.+....+|.. +++.+.+.+.+. .+|
T Consensus 111 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~---------------------~~~ 168 (406)
T PRK11551 111 LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGA-LASVIGVLAAGD---------------------AAW 168 (406)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccc---------------------cCH
Confidence 8899999988888899999999999999999999999999998 888887776655 258
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 529 RITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+..|++.+++.++..++.....++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888776555554444333333
No 140
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.17 E-value=4.3e-10 Score=118.09 Aligned_cols=172 Identities=18% Similarity=0.148 Sum_probs=126.3
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHhhCCch-------hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHD-------TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTC 424 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~ 424 (574)
.+..+++..++...........+|.+.+++|.+. .+...+...+...++.++.|+++||+||| ..+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~ 89 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK-----IMLLR 89 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH-----HHHHH
Confidence 4455555555544444445567888888888752 25677788889999999999999999999 55666
Q ss_pred HHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 425 TQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 425 ~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
+.+...++..+.... +...+++...+.|++.+ ..+.....+.+.+|+++++.+.|+......++.. ++|.+.+.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~ 167 (408)
T PRK09874 90 SALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGAL-LGPLAGGLLAD 167 (408)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 666666666655543 33456667777887654 4566667888999999999999999999999987 89999999888
Q ss_pred hhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 504 NEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
.. +|+..|++.+++.+++.+..+...+
T Consensus 168 ~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 168 SY---------------------GLRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred Hh---------------------CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 63 5888898888777766655544444
No 141
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.17 E-value=4.1e-10 Score=117.77 Aligned_cols=156 Identities=16% Similarity=0.158 Sum_probs=122.6
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 446 (574)
....+|.+.+++|.+ +.++..+.+.++..++.+..|+++||+||| ..+..+.+...++..+....+ ...+++
T Consensus 22 ~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 96 (392)
T PRK10473 22 YLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIASLLCSLAETSSLFLA 96 (392)
T ss_pred HhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 345678888888885 456778888899999999999999999999 566667677777766655443 345666
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
...+.|++.+...+....++.|.+++++|+++.|+.+....++.. ++|.+.+.+.+. .
T Consensus 97 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~-~~~~i~~~l~~~---------------------~ 154 (392)
T PRK10473 97 GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPV-LAPVLGHLIMLK---------------------F 154 (392)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhC---------------------c
Confidence 778889888888888889999999999999999999999889887 899888887765 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 527 CFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+|+..|++.+++.+++.++.+...++
T Consensus 155 g~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 155 PWQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 58888988887777766655444443
No 142
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.16 E-value=4.9e-10 Score=118.02 Aligned_cols=158 Identities=11% Similarity=0.034 Sum_probs=123.0
Q ss_pred eeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHH
Q 008210 368 VTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTL 444 (574)
Q Consensus 368 ~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l 444 (574)
......+|.+.++++.+ +..+.++.+.++..++.+.+|+++||+||| .++..+..+..++.++....+ ...+
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l 107 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQF 107 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 33455677777888874 567788899999999999999999999999 566667777777766655444 3467
Q ss_pred HHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccC
Q 008210 445 YAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLG 524 (574)
Q Consensus 445 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (574)
++..++.|++.+...+....++.|.+++++++++.++.+....++.. +||.+.+.+.+.
T Consensus 108 ~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~lg~~l~~~-------------------- 166 (413)
T PRK15403 108 LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPI-IGPLSGAALMHF-------------------- 166 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh--------------------
Confidence 77888899887765566667889999999999999999999999998 899888888766
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 525 PNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
.+|+..|++.++..+++.+..++..++
T Consensus 167 -~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 167 -VHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 259999998888777765544433343
No 143
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.5e-10 Score=115.98 Aligned_cols=157 Identities=17% Similarity=0.181 Sum_probs=129.9
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCch-HHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDG-TLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~ 446 (574)
+...-|.+.++.|++ +-+.+.+.+.+...++..+.|.++||...| ..+.+++++.++..+++.+.++. .+.+
T Consensus 48 F~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~gLilsai~nil~Gfs~s~~~~~~ 122 (448)
T COG2271 48 FNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFGLILSAIVNILFGFSPSLFLFAV 122 (448)
T ss_pred HhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 334456666666674 678899999999999999999999999888 67888888888888888765543 5567
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH--HhhhhhhhhhhcccccccCCcccccC
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA--GYIYDNEAAKQQGFNLLTSNVVSCLG 524 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~--g~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (574)
...+.|.+.|..+|...-++..-|++++||+.+++.++..++|+. +.|++. +++.++
T Consensus 123 l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGa-l~~~~~~la~~~~~-------------------- 181 (448)
T COG2271 123 LWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGA-LAPLVALLAFFAFH-------------------- 181 (448)
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccc-hHHHHHHHHHHHhc--------------------
Confidence 788999999999999999999999999999999999999999999 667788 777776
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 008210 525 PNCFRITFFVLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (574)
.+|+.+|++-++++++..++.+.+.+.+
T Consensus 182 -~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 182 -GGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3699999999888777666666555543
No 144
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.16 E-value=3e-10 Score=117.43 Aligned_cols=155 Identities=12% Similarity=0.086 Sum_probs=116.0
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-cCchHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-SIDGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~ 446 (574)
+...+|.+.+++|.+ +.++..+.+.++..++.+..|+++||+||| .++.........+...... .+...+++
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGSLATFAAAAGRLLDPFNYEWLLA 84 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 345677888888885 556788889999999999999999999988 4444433333333322222 34457778
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
..++.|++.+.. ......++|.+|+|+|+++.++...+..+|.. +++.+.+.+.+. .
T Consensus 85 ~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~-l~~~~~~~l~~~---------------------~ 141 (368)
T TIGR00903 85 CQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGII-FALAAGLKIYTA---------------------G 141 (368)
T ss_pred HHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHc---------------------c
Confidence 889999988864 44445568999999999999999999999998 899888888776 3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 527 CFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+|+..|++.+++.++..++.+...++
T Consensus 142 gWr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 142 GLQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 69999998887777766555554444
No 145
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.16 E-value=5.2e-10 Score=118.55 Aligned_cols=168 Identities=14% Similarity=0.122 Sum_probs=122.7
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhh-hccccCchhhHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHF-VRKTIPRTIWMTCTQV 427 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~-g~r~~~~~~~~~~~~~ 427 (574)
.+|..+...++.......+..+++.+.++ +|++ ++....+.+.....++.+++|+++||+ ||| ..+..+.+
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG~i 84 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLGAL 84 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHHHH
Confidence 34555555444444444455677777655 6885 456677788888899999999999999 999 56677777
Q ss_pred HHHHHHHHHHhcC--chHHHHHHHHHhhhccchhhhHHHHHHhhcCcc--chhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 428 IMIITYLLFASSI--DGTLYAATALLGICYGVQFSIMIPTVSELFGLE--HFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 428 ~~~i~~~~~~~~~--~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
+..++.+++...+ ....++...+..++.|...+...++++|.+|++ +|..+.++.+...++|+. ++|.+.|++.+
T Consensus 85 l~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~-iap~l~g~L~~ 163 (493)
T PRK15462 85 LMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSI-IAPIACGYAQE 163 (493)
T ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHH-HHHHHHHHHHh
Confidence 7777766654322 223444455566777777787888999999986 589999999999999998 99999999988
Q ss_pred hhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 504 NEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
.. +|+..|.+.++..+++++..
T Consensus 164 ~~---------------------Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 164 EY---------------------SWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred hh---------------------ChHHHHHHHHHHHHHHHHHH
Confidence 63 58999988766555554443
No 146
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.15 E-value=3.3e-10 Score=118.77 Aligned_cols=167 Identities=16% Similarity=0.113 Sum_probs=125.6
Q ss_pred HHHHHHHHhhcccceeeeccHHHHH-HhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHH
Q 008210 354 WLLFLVYFAGVGSGVTVLNNLAQIG-IAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMI 430 (574)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~ 430 (574)
+.+.+..++...+.......++.++ +++|.+ ..++..+...+...+..+++|+++||+||| ..+..+.....
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~~~~~ 87 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGMLMRA 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHHHHHH
Confidence 3344444444444444555666655 557875 456777788888888899999999999999 66777777777
Q ss_pred HHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhh
Q 008210 431 ITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQ 509 (574)
Q Consensus 431 i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~ 509 (574)
++++.....+ .+.+++...+.|++.+...+...+++.+.+|+++++++.|+......++.. +||.+.|.+.+.
T Consensus 88 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~-ig~~l~g~l~~~----- 161 (400)
T PRK11646 88 AGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAV-IGALLGSWLLQY----- 161 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh-----
Confidence 7777665443 346667778888888777788888999999999999999999999999998 899999999833
Q ss_pred cccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHH
Q 008210 510 QGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
+|+..|++.+..++++.++...
T Consensus 162 -----------------g~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 162 -----------------DFRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 4888888877766665544433
No 147
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.15 E-value=5.8e-09 Score=108.33 Aligned_cols=156 Identities=13% Similarity=0.042 Sum_probs=113.5
Q ss_pred ccccCcHHHHHHHHHHHHhhhc-cc-hhhcchHHHHh-hhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCC-hHHHH
Q 008210 6 AGSRPPWVGLGAAVWVQIAAGN-AY-NFPLYSHSLKS-VLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPP-WLVLF 80 (574)
Q Consensus 6 ~~~~~~w~~~~~~~l~~~~~g~-~~-~~~~~~~~l~~-~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~-r~~~~ 80 (574)
...+.+|+.+..+.+.++..+. .+ .++..-|++++ |.+-+.+..||+.....++-. ..+.+|+...|.+. |+-++
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 3457889998888887776554 22 34444566665 577888889996555666654 59999999999995 77777
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhh-CCCCcchHHHHHHhhhhhHHHHHHH
Q 008210 81 IGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRN-FPLSRGTVAGILKGYGGLSAAVFTE 159 (574)
Q Consensus 81 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~-fp~~rg~a~gi~~~~~~~g~~i~~~ 159 (574)
.|.+++++|.++.. ++....++ .-+.++++|++.|+|.|.. ..--.++++. .+++|-+|.+....+.-+|.+++|.
T Consensus 107 ~s~ii~~~g~llY~-~l~~~~~~-~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYL-ALAYVPNG-VKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHH-HHHhcccc-hHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 89999999987752 22333332 4678899999999998865 3455566654 4789999999998888888777766
Q ss_pred HHHHh
Q 008210 160 IYNML 164 (574)
Q Consensus 160 i~~~l 164 (574)
+...+
T Consensus 184 ~q~~f 188 (488)
T KOG2325|consen 184 IQLAF 188 (488)
T ss_pred HHHHH
Confidence 65543
No 148
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.15 E-value=3.1e-10 Score=118.72 Aligned_cols=147 Identities=16% Similarity=0.142 Sum_probs=112.7
Q ss_pred chhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHH
Q 008210 350 KADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQV 427 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 427 (574)
+|+++.+++..++............+.+.++++.+ ..++..+.+.+...+..+++|+++||+||| .++..+.+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-----~vl~~~~~ 76 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-----RVMFIANG 76 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-----hhhHHHHH
Confidence 34667777766665443333444455566777764 456788889999999999999999999999 56666666
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 428 IMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 428 ~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
+..++.++...... .++..++.|++.+...|...+++.|.+|+++++++.|+......++.. +||.++|.+.+.
T Consensus 77 ~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~-~Gp~lgG~l~~~ 150 (393)
T PRK11195 77 IKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAIL-LGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 66555544333222 255667889999999999999999999999999999999999998887 999999999886
No 149
>TIGR00895 2A0115 benzoate transport.
Probab=99.14 E-value=3.9e-10 Score=117.58 Aligned_cols=154 Identities=20% Similarity=0.158 Sum_probs=120.3
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 446 (574)
.....|.+.+++|.+ +.++..+...++..++.++.|+++||+||| ..+..+.++..++.++....+ ...+++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (398)
T TIGR00895 36 MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSILLFSVFTLLCALATNVTQLLI 110 (398)
T ss_pred HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 344567777778875 456788888899999999999999999999 566666666666666655443 345667
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
...+.|++.+...+....++.|.+|+++++.+.|+......++.. ++|.+.+++.+..
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~--------------------- 168 (398)
T TIGR00895 111 LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAA-VGGFLAGWLIPVF--------------------- 168 (398)
T ss_pred HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHH-HHHHHHHHHhhcc---------------------
Confidence 788889999998999999999999999999999999999999998 8999999988763
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHh
Q 008210 527 CFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
+|+..|++.+++.++..++.+...
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~ 192 (398)
T TIGR00895 169 GWRSLFYVGGIAPLLLLLLLMRFL 192 (398)
T ss_pred cceeehhhhhhHHHHHHHHHHHhC
Confidence 478888877655555544444333
No 150
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.13 E-value=6.4e-10 Score=119.32 Aligned_cols=161 Identities=15% Similarity=0.072 Sum_probs=113.2
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~ 446 (574)
.....|.+.+++|.+ +.++..+...++..++.+++|+++||+||| +++.++.+...++.++.... +...+++
T Consensus 55 ~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r-----~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 129 (476)
T PLN00028 55 AAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR-----YGSAFLLMLTAPAVFCMSLVSSATGFIA 129 (476)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 344566777888885 455677778888999999999999999999 56666666667766655544 3345566
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
..++.|++.+... ....+++|.+|+++||.+.|+.+....+++. +++.+.+.+.+...... +.+..
T Consensus 130 ~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~-~~~~~~~~i~~~~~~~~------------~~~~~ 195 (476)
T PLN00028 130 VRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGG-VTQLLMPLVFPLIKDAG------------APSFT 195 (476)
T ss_pred HHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC------------Ccchh
Confidence 6778888776543 3456789999999999999999888788877 77766666544211100 00113
Q ss_pred cchhHHHHHHHHHHHHHHHHHHH
Q 008210 527 CFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
+|+..|++.+++.++..++.+++
T Consensus 196 gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 196 AWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999888777665555444
No 151
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.13 E-value=4.7e-10 Score=116.48 Aligned_cols=156 Identities=19% Similarity=0.257 Sum_probs=124.6
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 446 (574)
....+|.+.+++|.+ +.++..+...++..++.+.+|+++||+||| ..+..+.+...++..+....+ ...+++
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 345678888888885 567788899999999999999999999998 566767777777766665433 346667
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
...+.|++.+...+....++.|.+|+++++++.|+.+....++.. ++|.+.+.+.+..
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~--------------------- 142 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPL-LAPIIGGWLLVWF--------------------- 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHc---------------------
Confidence 788889988888888889999999999999999999999999998 8999999988863
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 527 CFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+|+..|++.+.+.++..+......++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 143 SWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58888888777776665554444333
No 152
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.13 E-value=1e-09 Score=116.10 Aligned_cols=141 Identities=16% Similarity=0.112 Sum_probs=114.6
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 446 (574)
..+..+.+.++.|.+ +.++..+...++..++.+..|+++||+||| ..+..+.+...++..+....+ ...+++
T Consensus 37 ~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (426)
T PRK12307 37 IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK-----PLMMWSIVAYSVGTGLSGLASGVIMLTL 111 (426)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 344456666778885 456788889999999999999999999999 677777777777776665443 446777
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
...+.|++.+..++....++.|.+|+++|+++.|+...+..+|.. +++.+.+.+.+. .
T Consensus 112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~-~~~~l~~~l~~~---------------------~ 169 (426)
T PRK12307 112 SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI-IAAYFMPSFAEA---------------------Y 169 (426)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH-HHHHHHHHHccc---------------------C
Confidence 888999999988899999999999999999999999999999988 888888887765 2
Q ss_pred cchhHHHHHHH
Q 008210 527 CFRITFFVLAG 537 (574)
Q Consensus 527 ~~~~~~~~~~~ 537 (574)
+|+..|++...
T Consensus 170 ~w~~~f~i~~~ 180 (426)
T PRK12307 170 GWRAAFFVGLL 180 (426)
T ss_pred CHHHHHHHHHH
Confidence 58888876443
No 153
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.12 E-value=1.2e-09 Score=114.69 Aligned_cols=156 Identities=13% Similarity=0.027 Sum_probs=119.9
Q ss_pred eeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHH
Q 008210 369 TVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLY 445 (574)
Q Consensus 369 ~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~ 445 (574)
.+...++.+.++++.+ +.++..+.+.++..++.+..|.++||+||| .++..+.....++.++.... +...++
T Consensus 31 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~l~ 105 (406)
T PRK15402 31 MIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR-----PVMLAGVAFFILTCLAILLAQSIEQFT 105 (406)
T ss_pred hHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 3445567777888885 456778889999999999999999999999 55666666666666555443 344666
Q ss_pred HHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCC
Q 008210 446 AATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGP 525 (574)
Q Consensus 446 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 525 (574)
+...+.|++.+...+.....+.|.+++++++...++......++.. ++|.+.+.+.+..
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~l~~~~-------------------- 164 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPL-LGPLVGAALIHVL-------------------- 164 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcc--------------------
Confidence 7788889888887788888999999999999999998888888877 8999999888762
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 526 NCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
+|+..|++.+++.+++.+..+...+
T Consensus 165 -~w~~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK15402 165 -PWRGMFVLFAALAALSFFGLWRAMP 189 (406)
T ss_pred -CccHHHHHHHHHHHHHHHHHHHhCC
Confidence 5899998888777766554443333
No 154
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.12 E-value=6.8e-10 Score=119.04 Aligned_cols=165 Identities=16% Similarity=0.158 Sum_probs=124.0
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHH-hhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhh-hhccccCchhhHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVH--DTTILLSLFSFCNFVGRLGGGVVSEH-FVRKTIPRTIWMTCTQV 427 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr-~g~r~~~~~~~~~~~~~ 427 (574)
.+|..+...++.-........+++.|.+ ++|.+ ++.+..+.+.....+..+++|+++|| +||| ..+..+.+
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g~~ 89 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLGAI 89 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHHHH
Confidence 4555555555544444444555666654 47775 45667777777788888899999999 9999 67788888
Q ss_pred HHHHHHHHHHhcCc-h-HHHHHHHHHhhhccchhhhHHHHHHhhcCccc--hhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 428 IMIITYLLFASSID-G-TLYAATALLGICYGVQFSIMIPTVSELFGLEH--FGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 428 ~~~i~~~~~~~~~~-~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
+..++.+++..... . .+++...+.|++.|...+...+++.|.+|+++ ++.++++.+.+.++|.. +||.+.|++.+
T Consensus 90 ~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~-~g~~l~g~l~~ 168 (489)
T PRK10207 90 VLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL-ISLSLAPVIAD 168 (489)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH-HHHHHHHHHHH
Confidence 88888776654432 2 34567788899999999999999999998874 57899999999999998 99999999988
Q ss_pred hhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHH
Q 008210 504 NEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGS 543 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
+. +|+..|++.++..++++
T Consensus 169 ~~---------------------gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 169 KF---------------------GYSVTYNLCGAGLIIAL 187 (489)
T ss_pred hh---------------------ChHHHHHHHHHHHHHHH
Confidence 73 59999988665444443
No 155
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.12 E-value=1.1e-09 Score=114.52 Aligned_cols=171 Identities=15% Similarity=0.156 Sum_probs=125.9
Q ss_pred HHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHH
Q 008210 354 WLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMII 431 (574)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i 431 (574)
+......++...........+|.+.+++|.+ +.++..+...++..++.+..|+++||+||| ..+..+.....+
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~ 85 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFIL 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHH
Confidence 3344444443333334455678888888885 567788899999999999999999999999 566666666666
Q ss_pred HHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhc
Q 008210 432 TYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQ 510 (574)
Q Consensus 432 ~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~ 510 (574)
+.++....+ ...+++...+.|++.+...+....+..|.++.++++.+.+..+.+..++.. ++|.+.+.+.+..
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~l~~~~----- 159 (394)
T PRK11652 86 GTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPL-LAPLIGGLLTTLF----- 159 (394)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcc-----
Confidence 666555433 346667778889888877777777888999989999999999999888887 8999999887762
Q ss_pred ccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 511 GFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
+|+..|++.++..++..++.....+
T Consensus 160 ----------------g~~~~f~~~~~~~~~~~~~~~~~~~ 184 (394)
T PRK11652 160 ----------------GWRACYLFLLLLGAGVTFSMARWMP 184 (394)
T ss_pred ----------------ChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5898998877666554444333333
No 156
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.12 E-value=1.9e-10 Score=121.42 Aligned_cols=174 Identities=13% Similarity=0.116 Sum_probs=124.8
Q ss_pred HHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 345 TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
+...|+|.++.+.+..++...........+|.+.++.+.+ +.++..+...+...++.+..|+++||+|||+ ++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~-----~l 85 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKK-----LI 85 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCce-----EE
Confidence 3445677777776666555444444455677777777664 5678888999999999999999999999993 33
Q ss_pred HHHHHHHHHHHHHHH-----hcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHh
Q 008210 423 TCTQVIMIITYLLFA-----SSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGL 496 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~-----~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 496 (574)
..+.++..++..... ..+ ...+++..++.|++.+...+.....+.|.+|+++++++.++.+....++.. +||.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~ 164 (417)
T PRK10489 86 LLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV-ISPA 164 (417)
T ss_pred EehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHH-hHHH
Confidence 333333333333221 122 235556677778887777777788899999999999999999999999998 8999
Q ss_pred HHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHH
Q 008210 497 LAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSIL 545 (574)
Q Consensus 497 l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (574)
+.|.+.+.. +|++.|++.++..+++.+.
T Consensus 165 l~g~l~~~~---------------------~~~~~~~~~~~~~~~~~~~ 192 (417)
T PRK10489 165 LGGLLIAAG---------------------GVAWNYGLAAAGTFITLLP 192 (417)
T ss_pred HHHHHHHHH---------------------hhHHHHHHHHHHHHHHHHH
Confidence 999998873 4777787766665555443
No 157
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.11 E-value=1.1e-09 Score=113.14 Aligned_cols=146 Identities=16% Similarity=0.168 Sum_probs=110.4
Q ss_pred hHHHHHHHHHhhcccceeeeccHHH-HHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQ-IGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVI 428 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 428 (574)
.+|..++.++........+....|. +.+++|.+ +.++..+...++..++.+..|+++||+||| ..+..+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~ 76 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLL 76 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHH
Confidence 4566666666655555556667775 55678885 567788899999999999999999999999 567777777
Q ss_pred HHHHHHHHHhcC--chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 429 MIITYLLFASSI--DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 429 ~~i~~~~~~~~~--~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
..++.++....+ ...+++...+.|++.+ .++....++.|.+|+++|+.+.++......+|.. +++.+.+.+.+.
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~~ 152 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGG-VAQFVMPPIIGS 152 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHH-HHHHHHHHHHHH
Confidence 777777665443 3456677788888754 4455678899999999999999999877777776 677676666553
No 158
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.11 E-value=1.1e-09 Score=116.86 Aligned_cols=154 Identities=12% Similarity=0.075 Sum_probs=110.8
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-----CchHH
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-----IDGTL 444 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~l 444 (574)
...|.+.++ |++ +.++..+...++..++.+.+|+++||+||| +++..+.++.+++.++.... +...+
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k-----~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 123 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR-----VFLPAGLILAAAVMLFMGFVPWATSSIAVM 123 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc-----hhHHHHHHHHHHHHHHHHhhhcccccHHHH
Confidence 345655555 774 567788899999999999999999999999 56666666666666655432 22345
Q ss_pred HHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccC
Q 008210 445 YAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLG 524 (574)
Q Consensus 445 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (574)
++...+.|++.+..++.....+.+.+|+++++.+.|+.+.+..+++.+.+|.+...+...
T Consensus 124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-------------------- 183 (452)
T PRK11273 124 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-------------------- 183 (452)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh--------------------
Confidence 666788898888887777778889999999999999999999988753556433222221
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 525 PNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
.+|+..|++.++.+++..++.++..++
T Consensus 184 -~gw~~~f~i~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 184 -NDWHAALYMPAFAAILVALFAFAMMRD 210 (452)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 258999998877666655555444443
No 159
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.11 E-value=6.4e-10 Score=114.90 Aligned_cols=154 Identities=18% Similarity=0.222 Sum_probs=117.9
Q ss_pred eeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHH
Q 008210 369 TVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLY 445 (574)
Q Consensus 369 ~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~ 445 (574)
......|.+.+++|.+ +.++..+.+.++..++.+..|+++||+||| ..+..+.++..++.+.....+ ...++
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR-----AVAMLGGILYGLGFTFYAIADSLAALY 95 (377)
T ss_pred hhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc-----chhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677788888885 567889999999999999999999999999 556666777777776665443 34566
Q ss_pred HHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCC
Q 008210 446 AATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGP 525 (574)
Q Consensus 446 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 525 (574)
+...+.|++.+..++.....+.+.+| |+|+.+.++......++.. +++++.+.+.+.
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~--------------------- 152 (377)
T TIGR00890 96 LTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSF-ILSPLITSVINL--------------------- 152 (377)
T ss_pred HHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHh-HHHHHHHHHHhc---------------------
Confidence 67778899888777777777888886 6799999999999999987 555577766654
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 526 NCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
.+|+..|++.++..++..+..+...
T Consensus 153 ~~~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 153 EGVPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhe
Confidence 2589999988877777665554443
No 160
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.11 E-value=2.9e-09 Score=114.79 Aligned_cols=168 Identities=15% Similarity=0.112 Sum_probs=112.2
Q ss_pred cchhhcchHHH-HhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008210 28 AYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (574)
Q Consensus 28 ~~~~~~~~~~l-~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 105 (574)
.|.+..+.|.+ ++++|.+..+..++.+...++..+ .++.|+++||+|||+++.++.+.+.++...+.... . + ++
T Consensus 266 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~-~-~~ 341 (490)
T PRK10642 266 YYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--N-S-NV 341 (490)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH--h-C-CC
Confidence 45555566665 467899888777765666666655 88999999999999998888765444322221111 1 1 24
Q ss_pred HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC-ChhHHHHHHHHHHHHH
Q 008210 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAV 183 (574)
Q Consensus 106 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~-~~~~~~~~~~~~~~~~ 183 (574)
.+.+++++++.|++.+........++.+.|| +.||+++|+.......++.+.|.+.+.+.+. .+|+...+...++.++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i 421 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVI 421 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 5667778888888777665566667778998 5799999975544445667778877766543 3455444455566666
Q ss_pred HHHHHHhcccCCCCCC
Q 008210 184 CLVMMYFVRPCTPASG 199 (574)
Q Consensus 184 ~~~~~~~~~~~~~~~~ 199 (574)
.++..+++++.|++..
T Consensus 422 ~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 422 GLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHhccccCCCC
Confidence 6666777777666533
No 161
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.10 E-value=4.2e-09 Score=110.20 Aligned_cols=155 Identities=8% Similarity=0.027 Sum_probs=112.3
Q ss_pred hhcchH-HHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 008210 31 FPLYSH-SLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (574)
Q Consensus 31 ~~~~~~-~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 108 (574)
+..+.| .+++++|++..+.+++........+. .++.|++.||+|+|+.+..+.+...+.+..+ . .. ++++.
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~---~~--~~~~~ 307 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--L---MA--HSPAI 307 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--H---HH--hhHHH
Confidence 333344 45778999999999854444444444 8999999999999998877666555443221 1 11 24566
Q ss_pred HHHHHHHHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHH
Q 008210 109 LWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMM 188 (574)
Q Consensus 109 l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (574)
+++.+++.+++.|...........+.+|++||+++++......+|..+++.+.+.+.+...|+..+.+...+.+++.+..
T Consensus 308 ~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 308 LLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCL 387 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 77788888888777666666677889998899999999888889999999998887766667777777776776666666
Q ss_pred Hhcc
Q 008210 189 YFVR 192 (574)
Q Consensus 189 ~~~~ 192 (574)
+..+
T Consensus 388 ~~~~ 391 (393)
T PRK15011 388 LRIK 391 (393)
T ss_pred Hhhc
Confidence 5543
No 162
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.10 E-value=8.5e-10 Score=118.22 Aligned_cols=156 Identities=14% Similarity=0.056 Sum_probs=115.1
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh------cCc
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS------SID 441 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~------~~~ 441 (574)
+....|.+.+++|.+ +.++..+.+.++..++.+..|+++||+|+| +++.++.+..+++..+... .+.
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTK-----QFLPFLLILSAICMLGFGASLGSGSVSL 122 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCcc-----chHHHHHHHHHHHHHHHHHHHhcccchH
Confidence 334467788888884 567888899999999999999999999999 5555554444444433322 233
Q ss_pred hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCccc
Q 008210 442 GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVS 521 (574)
Q Consensus 442 ~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~ 521 (574)
..+++..++.|++.+..++....+++|.+|+++||.+.|+...+..+|.. +++.+..++.+..-.
T Consensus 123 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~-l~~~i~~~~~~~~~~-------------- 187 (467)
T PRK09556 123 GLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGA-GAGGVALWGANYFFD-------------- 187 (467)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhh-HHHHHHHHHHHhhcc--------------
Confidence 46677788899999988898889999999999999999999999999998 788777666554200
Q ss_pred ccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 522 CLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
++|+..|.+.++..++..++.+++
T Consensus 188 ----~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 188 ----GHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred ----CcchhHHHHHHHHHHHHHHHHHHh
Confidence 247777777666655544444443
No 163
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.09 E-value=1.5e-09 Score=113.96 Aligned_cols=148 Identities=10% Similarity=0.024 Sum_probs=106.7
Q ss_pred HHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHH
Q 008210 353 FWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMI 430 (574)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~ 430 (574)
++..+++.++..........+++.+.+++|.+ +.++..+.+.++..++.++.|++.||+||| +.+..+..+..
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k-----~~l~~~~~~~~ 89 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL-----KTMMIGLLLWC 89 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHH
Confidence 33444443333333333445677788888885 567888999999999999999999999999 56666666666
Q ss_pred HHHHHHH---h--cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 431 ITYLLFA---S--SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 431 i~~~~~~---~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
++..+.. . .+...+++...+.|++.+...+.....+.+.+++++++++.|+..+..++|..+++|.+.+++.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 6544321 2 1233556677777888776666666778889999999999999999999886337898888888763
No 164
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.09 E-value=2.1e-09 Score=109.81 Aligned_cols=163 Identities=21% Similarity=0.279 Sum_probs=127.8
Q ss_pred HHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHH
Q 008210 358 LVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLL 435 (574)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~ 435 (574)
...+.............+.+.++.|.+ +.++..+...+...++.+..|++.||+||| +.+..+.+...++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r-----~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRR-----RVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCc-----hhhHHHHHHHHHHHHH
Confidence 333333333344455677777777774 567788889999999999999999999999 5666677777777766
Q ss_pred HHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhccccc
Q 008210 436 FASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNL 514 (574)
Q Consensus 436 ~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~ 514 (574)
.... +...+++...+.|++.+...+....++.|.+|+|+|++..++......+|.. ++|.+.+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~--------- 150 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGAL-LGPLLGGLLAESL--------- 150 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHH-HHHHHHHHHHHHh---------
Confidence 6544 3446677888899999999999999999999999999999999999999998 8999999998873
Q ss_pred ccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 515 LTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
+|+..+++.+...+++.+...
T Consensus 151 ------------~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 151 ------------GWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHH
Confidence 478888877776666655443
No 165
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.09 E-value=2.1e-09 Score=114.71 Aligned_cols=152 Identities=14% Similarity=0.205 Sum_probs=115.5
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc-hHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID-GTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~ 446 (574)
+..+.+.+.+++|.+ +.++..+.+.+...++.+++|+++||+||| ..+..+.++..++.++....+. ..+++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR-----PVVIAGGLLASLGMILASFSSNVIELYL 112 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch-----HHHHhhHHHHHHHHHHHHHhhhHHHHHH
Confidence 445677788888884 566777788888889999999999999999 5666666666666666554433 34443
Q ss_pred H-HHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCC
Q 008210 447 A-TALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGP 525 (574)
Q Consensus 447 ~-~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 525 (574)
. ..+.|++.+..++....++.+.++ ++|+.+.|+.+.+..+++. ++|.+.+.+.+..
T Consensus 113 ~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~-~~~~l~~~l~~~~-------------------- 170 (455)
T TIGR00892 113 TAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLS-TLAPLNQYLFESF-------------------- 170 (455)
T ss_pred HHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHH-HHHHHHHHHHHHh--------------------
Confidence 3 467788888766666677788885 7899999999999999998 8998999998873
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHH
Q 008210 526 NCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
+|+.+|++.+++.+++.+..++.
T Consensus 171 -gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 171 -GWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHh
Confidence 59999999888777665544433
No 166
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.09 E-value=2.5e-09 Score=111.93 Aligned_cols=146 Identities=14% Similarity=0.125 Sum_probs=119.2
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYA 446 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 446 (574)
....+|.+.+++|.+ +.++..+.+.++..++.+..|++.||+||| .++..+..+.+++.+.....+ ...+++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r-----~~l~~~~~l~~~~~~~~~~a~~~~~ll~ 102 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER-----RSVAISLLLIAVGALMRELYPQSALLLS 102 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHCcchHHHHH
Confidence 445678888888885 567899999999999999999999999999 788888899999888877554 446777
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
..++.|++.+...+..+.++.+.+| ++++.++|+...+...|.. +++.+.+++.++. .
T Consensus 103 ~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~-~g~~~~~~l~~~~--------------------~ 160 (393)
T PRK09705 103 SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGG-LGAAITPWLVQHS--------------------E 160 (393)
T ss_pred HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHH-HHHHHHHHHHHhc--------------------C
Confidence 8899999999888888889999987 7899999999998888887 8898888887763 2
Q ss_pred cchhHHHHHHHHHHHH
Q 008210 527 CFRITFFVLAGVCCVG 542 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~ 542 (574)
+|+..+.+.+...++.
T Consensus 161 ~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 161 TWYQTLAWWALPAVVA 176 (393)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 4787776655544433
No 167
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.07 E-value=3e-09 Score=92.99 Aligned_cols=126 Identities=17% Similarity=0.200 Sum_probs=99.4
Q ss_pred hhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC
Q 008210 58 IGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP 136 (574)
Q Consensus 58 ~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp 136 (574)
++.. .+++.|++.||+|||+.+.++.....++.+.+... ++++.+.+.+++.|++.+..++.....+.+.+|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 4444 48999999999999999999988888776553322 357888889999999999888888889999998
Q ss_pred -CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHh
Q 008210 137 -LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYF 190 (574)
Q Consensus 137 -~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (574)
++|+++.++......+|..+++.+...+.+..+|++.+.......++..+...+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 579999999999999999999999888876666766666555555554444433
No 168
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.07 E-value=1.8e-09 Score=116.67 Aligned_cols=147 Identities=18% Similarity=0.174 Sum_probs=115.8
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM 429 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 429 (574)
.+...++..+.............|.+.+++|.+ +.++..+...++..++.+..|+++||+||| ..+..+.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~ 95 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR-----LAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHH
Confidence 344455555544444444445567777788885 457788889999999999999999999999 5666677777
Q ss_pred HHHHHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 430 IITYLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 430 ~i~~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
.++.++....+ ...+++...+.|++.+..++....++.|.+++++++.+.|+......+|.. ++|.+.+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~ 170 (496)
T PRK03893 96 SVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAV-VAAQVYSLVVPV 170 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcc
Confidence 77776665443 346677888999998888888889999999999999999999999999998 899999998876
No 169
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.06 E-value=2.5e-09 Score=114.69 Aligned_cols=175 Identities=18% Similarity=0.194 Sum_probs=125.0
Q ss_pred hchhHHHHHHHHHhhcc----cceeeeccHHHHHHhhCCc-hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHH
Q 008210 349 VKADFWLLFLVYFAGVG----SGVTVLNNLAQIGIAQGVH-DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMT 423 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~ 423 (574)
++++++..+..+++... ........++.+.+++|-+ +..|+.....+...++.++.|.++|.+||| ++++
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~~i 112 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YFFI 112 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HHHH
Confidence 44555555444333221 1112223456677788774 567888889999999999999999999999 8899
Q ss_pred HHHHHHHHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 424 CTQVIMIITYLLFASSID-GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 424 ~~~~~~~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
.+.++..+|.++.+..+. ..++....+.|++.|.... ....++|+.|.|.|+...++......+... .+|.+...+.
T Consensus 113 ~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~-~~~~ia~~~~ 190 (599)
T PF06609_consen 113 IGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTW-ISPLIAQLFA 190 (599)
T ss_pred HHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhc-ccHHHHHHhc
Confidence 999999999998886554 4777788999999877654 456689999999998887776654444443 5565554443
Q ss_pred hhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 503 DNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
.+ .+||+.|++.+++..++++...++.+
T Consensus 191 ~~---------------------~~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 191 AH---------------------SGWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred cC---------------------CCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 33 36999999998888887766554443
No 170
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.05 E-value=1.7e-09 Score=114.24 Aligned_cols=175 Identities=13% Similarity=0.145 Sum_probs=110.7
Q ss_pred hhhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHH
Q 008210 347 AVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMT 423 (574)
Q Consensus 347 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~ 423 (574)
.+|+|++|.+.+.+++...+......+++.+.++ +|++ +.+...+...++..++++.+|+++||+||| ..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r-----~~~~ 80 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLK-----KHLL 80 (420)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHH
Confidence 4567888988877777665554556677777766 7885 567899999999999999999999999999 3443
Q ss_pred HHHHHHHHHHHHH---HhcCc--hHHHHHHHH----HhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHh
Q 008210 424 CTQVIMIITYLLF---ASSID--GTLYAATAL----LGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFS 494 (574)
Q Consensus 424 ~~~~~~~i~~~~~---~~~~~--~~l~~~~~l----~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~g 494 (574)
.+.....++.... ..... ...+....+ .|.+.....+....+..+ + .+++|..+|.......+|.. ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~-i~ 157 (420)
T PRK09528 81 WIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWA-LC 157 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHH-HH
Confidence 3322222222111 11110 011111222 222222323333333322 2 35578888998888899998 89
Q ss_pred HhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 495 GLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 495 p~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
|.+.|.+.+. +|+..|++.++.++++.++.+...+
T Consensus 158 ~~~~g~l~~~----------------------~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 158 AFIAGILFNI----------------------NPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HHHHHHHHhc----------------------CchHhHHHHHHHHHHHHHHHhcccc
Confidence 9999999875 2778888877777666555444433
No 171
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.05 E-value=1.8e-08 Score=100.17 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=73.9
Q ss_pred hhhcchHHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 008210 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (574)
Q Consensus 30 ~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 108 (574)
..+.|.-.+-+++|++..|++.+........ +++++.|.++||+|||+..++-+++..++|+.. ..++++.
T Consensus 52 LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k--------~~~~~~~ 123 (354)
T PF05631_consen 52 LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK--------HSSNYPV 123 (354)
T ss_pred hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH--------hccccHH
Confidence 3344443444689999999999655555554 559999999999999999999999988886541 1247899
Q ss_pred HHHHHHHHHhhhHhhhhHHHHH-HHhh
Q 008210 109 LWIALCVATNSSAWLGTAVLVT-NMRN 134 (574)
Q Consensus 109 l~~~~~l~G~g~g~~~~~~~~~-~~~~ 134 (574)
++++|++.|++.+..+.+-=.. +.++
T Consensus 124 L~~GRvlgGiaTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 124 LLLGRVLGGIATSLLFSAFESWMVHEH 150 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988766554 4444
No 172
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.04 E-value=5e-09 Score=109.96 Aligned_cols=186 Identities=12% Similarity=0.087 Sum_probs=121.8
Q ss_pred hhHHHHHHHHHhhcccceeeeccHHHHHH-hhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHH
Q 008210 351 ADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQV 427 (574)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 427 (574)
|.++..++.++.....-+......+.+.+ ++|++ +.+++.+++.+...+.|+..|++.||+|.| +++.++.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~l 108 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFSTA 108 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHH
Confidence 46666666665544433333334445544 57775 567788889999999999999999999999 56676777
Q ss_pred HHHHHHHHHHh------cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 428 IMIITYLLFAS------SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 428 ~~~i~~~~~~~------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
+..+..+.... ++...+++..++.|++ |..++.....+++.||++++|++.|+....+++|.. +++.+...+
T Consensus 109 l~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~-l~~~l~p~~ 186 (462)
T PRK15034 109 ILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVS-VMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHH-HHHHHHHHH
Confidence 77777666554 2334677788899997 778888888999999999999999999655556655 444444433
Q ss_pred h-----hhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhh
Q 008210 502 Y-----DNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 502 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
. +..+..... ....+..+++.+.++.....+++.+..++...
T Consensus 187 i~~~l~~~~G~~~~~--------~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 187 IFVPVFAFLGVNGVP--------QADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHhcccccc--------ccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 221110000 00001124677777777766666666655543
No 173
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.04 E-value=2.9e-11 Score=130.00 Aligned_cols=133 Identities=17% Similarity=0.065 Sum_probs=3.0
Q ss_pred hcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHH--Hhh---------
Q 008210 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLA--VSR--------- 99 (574)
Q Consensus 32 ~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~--~~~--------- 99 (574)
.....+++++|+++.++.+++.+.+-++..+ .++..++.+|-+|-+.+.+|.+++++|++++.+= ..+
T Consensus 23 ~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 23 NSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 3445789999999999999998888888865 8889999999888888999999999998775320 000
Q ss_pred --------------------------------ccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHH
Q 008210 100 --------------------------------TVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGIL 146 (574)
Q Consensus 100 --------------------------------~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~ 146 (574)
...+..++.++++.++.|+|+...++....++-|+.+ ++-+...|+.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 0000013556778999999999999999999999997 5778889999
Q ss_pred HhhhhhHHHHHHHHHHHh
Q 008210 147 KGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 147 ~~~~~~g~~i~~~i~~~l 164 (574)
.+...+|++++-.+++.+
T Consensus 183 ~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFC 200 (539)
T ss_dssp ------------------
T ss_pred hHHhhccHHHHHHHHHHH
Confidence 998888887765554433
No 174
>PRK11043 putative transporter; Provisional
Probab=99.04 E-value=3.4e-09 Score=111.19 Aligned_cols=151 Identities=14% Similarity=0.093 Sum_probs=117.2
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHH
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAAT 448 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 448 (574)
..++.+.+++|.+ +.++..+.+.++..++.+.+|+++||+||| ..+..+..+..++.++.... +...+++..
T Consensus 27 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (401)
T PRK11043 27 PAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWVESAAQLLVLR 101 (401)
T ss_pred hhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3455666778875 567788899999999999999999999999 56666666666666655543 334566677
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
.+.|++.+...+.....+.|.+++++++...+..+....++.. ++|.+.+++.+.. +|
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~l~~~~---------------------g~ 159 (401)
T PRK11043 102 FVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPA-LAPLLGAWLLNHF---------------------GW 159 (401)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC---------------------Ch
Confidence 8888887777777778899999999999999998888889988 8999999998873 58
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 008210 529 RITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~ 549 (574)
+..|++.+++.++..+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 160 QAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 888888877776665544433
No 175
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.02 E-value=4e-09 Score=109.86 Aligned_cols=149 Identities=11% Similarity=-0.024 Sum_probs=119.8
Q ss_pred chhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHH
Q 008210 350 KADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQV 427 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 427 (574)
++++|.+....++...........+|.+.+++|.+ +.++..+.+.++..++.+..|+++||+||| ..+..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k-----~~~~~~~~ 79 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN-----RSYYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----HHHHHHHH
Confidence 34577777777666655555667788999888885 678899999999999999999999999999 56666777
Q ss_pred HHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 428 IMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 428 ~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
+..++....... +...+++...+.|++.+...+.....+.+..+++++++++|.......+|.. +||.+.+.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~l~~~ 156 (381)
T PRK03633 80 IFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTV-LGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccc
Confidence 777776665543 3446677788889988887777777778888889999999999999999998 899898887665
No 176
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.02 E-value=1.2e-08 Score=105.70 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=109.0
Q ss_pred HHHHhhhCCCHHHHHHHHHHHHhhh-hccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHH
Q 008210 36 HSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALC 114 (574)
Q Consensus 36 ~~l~~~l~~s~~~~~~i~~~~~~~~-~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (574)
..+++++|.+..+.+++........ ...++.|++.||+|+|+++.++.+...+.+..+. .. ++.+.+++.++
T Consensus 224 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~ 296 (375)
T TIGR00899 224 LLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLA-----AD--NSLWALLMLQL 296 (375)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHH-----HH--HHHHHHHHHHH
Confidence 3456789999999988544433333 3478999999999999998877665544432211 11 35677777889
Q ss_pred HHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhc
Q 008210 115 VATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFV 191 (574)
Q Consensus 115 l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (574)
+.|++.|...+.....+.+.+|+++++++++......+|..+++.+.+.+.+..+++..+....+..+++.+...++
T Consensus 297 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 297 LNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 99999888877777788899998888999999988889999999998887766566666666666666655554443
No 177
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.01 E-value=2.8e-09 Score=111.73 Aligned_cols=147 Identities=16% Similarity=0.035 Sum_probs=106.6
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHH-HhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIG-IAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVI 428 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 428 (574)
++..+.+..+............+|.+. +++|.+ +.++..+...++..++.+..|+++||+||| .++..+.+.
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r-----~~l~~~~~~ 90 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPK-----KAVVFGLCG 90 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCc-----chHHHHHHH
Confidence 444444444443333333444566654 557774 567888999999999999999999999999 556665555
Q ss_pred HHHHHHHHH---hcC------chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHH
Q 008210 429 MIITYLLFA---SSI------DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAG 499 (574)
Q Consensus 429 ~~i~~~~~~---~~~------~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g 499 (574)
..++..... ..+ ...+++..++.|++.+...+....++.|.+|+|+|+++.|+......++.. +||.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~l~~ 169 (399)
T PRK05122 91 CALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALA-IGAPLGV 169 (399)
T ss_pred HHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHH-HHHHHHH
Confidence 544433222 111 124566778999998888888888889999999999999998888888887 8999999
Q ss_pred hhhhh
Q 008210 500 YIYDN 504 (574)
Q Consensus 500 ~l~~~ 504 (574)
.+.+.
T Consensus 170 ~l~~~ 174 (399)
T PRK05122 170 LLYHW 174 (399)
T ss_pred HHHHc
Confidence 98876
No 178
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.01 E-value=4.6e-09 Score=110.04 Aligned_cols=169 Identities=12% Similarity=0.143 Sum_probs=113.7
Q ss_pred chhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHH
Q 008210 350 KADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQ 426 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~ 426 (574)
||++|.+....++.......+..+++.+.++ +|.+ +.++..+...+...++++.+|+++||+||| ..+..+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr-----~~~~~~~ 75 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK-----KHLLWII 75 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHH
Confidence 5778888777766655555556677777765 6874 567899999999999999999999999999 3333332
Q ss_pred HHHHHHHH---HHHhcC-----ch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 427 VIMIITYL---LFASSI-----DG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 427 ~~~~i~~~---~~~~~~-----~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
....++.. .+.... .. ..++...+.|++.+...+....+..+.- ++++..+|.......+|.. ++|.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~-~g~~~ 152 (396)
T TIGR00882 76 SGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWA-LCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHH-HHHHH
Confidence 22222221 111111 11 2233455667777777777766666643 3445677888888899988 89999
Q ss_pred HHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHH
Q 008210 498 AGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 498 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
.|.+.+. +|+..|++.+.+.++..++.+.
T Consensus 153 ~g~l~~~----------------------~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 153 AGILFSI----------------------DPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred Hhhhhcc----------------------CchHHHHHHHHHHHHHHHHHHH
Confidence 9888664 3788898887777766554433
No 179
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.01 E-value=1.6e-09 Score=94.72 Aligned_cols=131 Identities=19% Similarity=0.251 Sum_probs=102.7
Q ss_pred HHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhc
Q 008210 392 LFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELF 470 (574)
Q Consensus 392 ~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~ 470 (574)
...++..++.+..|++.||+||| ..+..+.....++.+..... +.....+...+.|++.+...+....++.|.+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 45677888999999999999999 55555656666665555443 3345566778888888888888889999999
Q ss_pred CccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHH
Q 008210 471 GLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIIL 549 (574)
Q Consensus 471 ~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (574)
|+++++++.|+.+....++.. ++|.+.+.+.+.. +|+..+++...+.+++.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPL-LGPPLGGVLAQFL---------------------GWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHH-HhHHhHHHHhccc---------------------chHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999998 8999999988763 47888888777766665555433
No 180
>PRK12382 putative transporter; Provisional
Probab=99.00 E-value=3.3e-09 Score=110.87 Aligned_cols=149 Identities=12% Similarity=0.006 Sum_probs=107.0
Q ss_pred chhHHHHHHHHHhhcccceeeeccHHHHH-HhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHH
Q 008210 350 KADFWLLFLVYFAGVGSGVTVLNNLAQIG-IAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQ 426 (574)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~ 426 (574)
++.++......++...........+|.+. +++|.+ +.++..+.+.+...++.+..|+++||+||| +.+..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r-----~~l~~~~ 88 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAK-----RSALQGM 88 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcch-----HHHHHHH
Confidence 34455555554444333333445566554 567875 567899999999999999999999999999 5555554
Q ss_pred HHHHHHHHH---HHh-c-----CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 427 VIMIITYLL---FAS-S-----IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 427 ~~~~i~~~~---~~~-~-----~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
+...++.+. ... . +...+++...+.|++.+...+....++.|.+|+|+|+++.|+..+...++.. ++|.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~-~g~~~ 167 (392)
T PRK12382 89 LACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA-AGAPL 167 (392)
T ss_pred HHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHH-HHHHH
Confidence 444443221 111 1 1235667778889988877777778889999999999999999988888887 89999
Q ss_pred HHhhhhh
Q 008210 498 AGYIYDN 504 (574)
Q Consensus 498 ~g~l~~~ 504 (574)
.+.+.+.
T Consensus 168 ~~~l~~~ 174 (392)
T PRK12382 168 GLLLHSH 174 (392)
T ss_pred HHHHHhc
Confidence 9988776
No 181
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.00 E-value=3.5e-09 Score=113.14 Aligned_cols=134 Identities=18% Similarity=0.202 Sum_probs=104.9
Q ss_pred hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-cCc---hHHHHHHHHHhhhccchhh
Q 008210 385 DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-SID---GTLYAATALLGICYGVQFS 460 (574)
Q Consensus 385 ~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~~~---~~l~~~~~l~g~~~g~~~~ 460 (574)
+.++..+.+.++..++.+.+|+++||+||| ..+.++.++..++.++... .+. ..+++...+.|++.+...+
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 146 (481)
T TIGR00879 72 LWGLVVSIFLVGGFIGALFAGWLSDRFGRK-----KSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASA 146 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhhhhhhhH-----HHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHh
Confidence 456788899999999999999999999999 5666666666666665532 221 2567788999999999999
Q ss_pred hHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH---HhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHH
Q 008210 461 IMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA---GYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAG 537 (574)
Q Consensus 461 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~---g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (574)
....++.|.+|+++|+.+.++.+....+|.. +++.+. +...+. .+|+..|++.+.
T Consensus 147 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~---------------------~~w~~~f~~~~~ 204 (481)
T TIGR00879 147 LVPMYLSEIAPKALRGALTSLYQLAITFGIL-VAYGFGSGKVSLNNT---------------------LGWRIPLGLQLI 204 (481)
T ss_pred HHHHHHHccCChhhhhhhhhHHHHHHHHHHH-HHHHHHHHhhcCCCC---------------------ccHHHHHHHHHH
Confidence 8899999999999999999999999999998 888776 333222 368999988665
Q ss_pred HHHHHHHH
Q 008210 538 VCCVGSIL 545 (574)
Q Consensus 538 ~~~~~~~~ 545 (574)
..++..+.
T Consensus 205 ~~~~~~~~ 212 (481)
T TIGR00879 205 PAGLLFLG 212 (481)
T ss_pred HHHHHHHH
Confidence 55554433
No 182
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.00 E-value=3.2e-07 Score=96.90 Aligned_cols=131 Identities=24% Similarity=0.189 Sum_probs=95.9
Q ss_pred cchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccccCC-----ChHHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 008210 33 LYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFP-----PWLVLFIGSLACFFGYGVLWLAVSRTVESLPYW 107 (574)
Q Consensus 33 ~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~G-----~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 107 (574)
...+.+++++|++++|.+.+.....+--.+-++.|.++|-+- ||+-+.++.++..++.+.+... .... .+..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~--~~~~-~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL--PASE-SSAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc--cccc-chhh
Confidence 445778999999999999987777777788999999999873 6666777777776554443222 2212 2355
Q ss_pred HHHHHHHHHHhhhHhhhhHHHHHHHhhC---CCCcchHHHHHHhhhhhHHHHHHHHHHHhcc
Q 008210 108 LLWIALCVATNSSAWLGTAVLVTNMRNF---PLSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (574)
Q Consensus 108 ~l~~~~~l~G~g~g~~~~~~~~~~~~~f---p~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~ 166 (574)
...+.-++.-+|.......+-..+.|.- |+.||...+..+....+|++++..+.+.+.+
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~ 149 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD 149 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 5666778888898888888888777766 4457888888888888888887777665544
No 183
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.97 E-value=1.8e-08 Score=106.34 Aligned_cols=159 Identities=13% Similarity=0.215 Sum_probs=108.6
Q ss_pred cchHHHHhhhCCCH--------HHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008210 33 LYSHSLKSVLGFNQ--------HQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (574)
Q Consensus 33 ~~~~~l~~~l~~s~--------~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 103 (574)
.+.+...++.+.+. ++.+...+...+... ..++.|++.||+|+|+++.++.++..+++.++... ....
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~---~~~~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG---DPEY 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc---Ccch
Confidence 44454455565443 444554444444443 48999999999999999999999888775443221 1111
Q ss_pred hhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHH-hhhhhHHHHHHHHHHHhccC------ChhHHHHH
Q 008210 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILK-GYGGLSAAVFTEIYNMLLHN------SSSKLLLV 175 (574)
Q Consensus 104 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~-~~~~~g~~i~~~i~~~l~~~------~~~~~~~~ 175 (574)
.+++.+++..++.|++.+...+....++.+++| ++||++.|+.. ..+++|.+++|.+.+.+.+. .+|+..+.
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 124566778999999999888888888999999 58999999997 67789999999998877653 24665554
Q ss_pred HHHHH-HHHHHHHHHhcccC
Q 008210 176 LAVGV-PAVCLVMMYFVRPC 194 (574)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~~~ 194 (574)
...++ .+..++...++++.
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCc
Confidence 44443 44445555555533
No 184
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.97 E-value=2.7e-09 Score=114.30 Aligned_cols=140 Identities=12% Similarity=0.157 Sum_probs=111.6
Q ss_pred hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh---cCchHHHHHHHHHhhhccchhhh
Q 008210 385 DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS---SIDGTLYAATALLGICYGVQFSI 461 (574)
Q Consensus 385 ~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~l~~~~~l~g~~~g~~~~~ 461 (574)
+.+...+.+.++..++.+.+|++.||+|+| +.+..+.++..++.++... .+...+++..++.|++.+..++.
T Consensus 77 ~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~ 151 (465)
T TIGR00894 77 LQGLILSSHFYGQIIIQIPVGYLAGKYVFK-----WSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPA 151 (465)
T ss_pred HhhHHHHHHHHHHHHHHcchHHHHHHhCcc-----hhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhh
Confidence 456788899999999999999999999999 5566666665555544322 22346677889999999999999
Q ss_pred HHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHH
Q 008210 462 MIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCV 541 (574)
Q Consensus 462 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (574)
...+++|.+|+++|+++.|+...+..+|.. ++|.+.+.+.+.. .+|+..|++.+++.++
T Consensus 152 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-i~~~l~~~l~~~~--------------------~gw~~~f~i~~~~~~~ 210 (465)
T TIGR00894 152 THKIIVKWAPPKERSRLLGMSTSGFQLGTF-IFLPISGWLCESW--------------------GGWPMIFYVFGIVGCA 210 (465)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcc--------------------CCCCeehhhhhHHHHH
Confidence 999999999999999999999999999998 8999999988762 1589999988877666
Q ss_pred HHHHHHHHh
Q 008210 542 GSILSIILN 550 (574)
Q Consensus 542 ~~~~~~~~~ 550 (574)
..++.+...
T Consensus 211 ~~~~~~~~~ 219 (465)
T TIGR00894 211 WSLLWFVFP 219 (465)
T ss_pred HHHHHHHHh
Confidence 554444433
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.96 E-value=1e-08 Score=110.18 Aligned_cols=143 Identities=16% Similarity=0.085 Sum_probs=106.2
Q ss_pred hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc----------C---chHHHHHHHHH
Q 008210 385 DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS----------I---DGTLYAATALL 451 (574)
Q Consensus 385 ~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~----------~---~~~l~~~~~l~ 451 (574)
+.++..+.+.++..++.+++|+++||+||| ..+..+.++..++.+..... + ...+++..++.
T Consensus 56 ~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr-----~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 56 LLGFCVASALIGCIIGGALGGYCSNRFGRR-----DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 456788999999999999999999999999 66666666666665554321 1 12456778999
Q ss_pred hhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhH
Q 008210 452 GICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRIT 531 (574)
Q Consensus 452 g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (574)
|++.|+..+..+.+++|.+|+++||.+.|+...+..+|.. +++.+.+.+.+...... ....+|+..
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~-------------~~~~gWr~~ 196 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL-VVYFVNYFIARSGDASW-------------LNTDGWRYM 196 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhccCcccc-------------cccCChHHH
Confidence 9999999999999999999999999999999998888887 77755544433210000 011369999
Q ss_pred HHHHHHHHHHHHHHH
Q 008210 532 FFVLAGVCCVGSILS 546 (574)
Q Consensus 532 ~~~~~~~~~~~~~~~ 546 (574)
|++.++..++..+..
T Consensus 197 f~~~~~~~~~~~~~~ 211 (479)
T PRK10077 197 FASEAIPALLFLMLL 211 (479)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988777666655443
No 186
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.92 E-value=1.9e-07 Score=98.34 Aligned_cols=117 Identities=21% Similarity=0.211 Sum_probs=90.5
Q ss_pred hhhHHHHHHHHHHhhhhhhhh-hhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhH
Q 008210 385 DTTILLSLFSFCNFVGRLGGG-VVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID-GTLYAATALLGICYGVQFSIM 462 (574)
Q Consensus 385 ~~~~~~~~~~i~~~ig~~~~G-~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~ 462 (574)
+.+.+.+...+...++.++.. .+.-.+|.| .++..++....+...+.++.+. +..+....+. ...+...+..
T Consensus 278 ~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~~~~~~~pa~ 351 (463)
T KOG2816|consen 278 EFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAGVVV-ALAGIVFPAI 351 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHHHHH-HhhcchhHHH
Confidence 455677777788888877777 666667777 5777788888888888776554 4445444444 4456677888
Q ss_pred HHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhh
Q 008210 463 IPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAK 508 (574)
Q Consensus 463 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~ 508 (574)
-+.++...+++++|++.+++.....+.+. ++|.+.+.++..+...
T Consensus 352 ~s~~s~~v~~~e~g~v~~~is~i~~l~~~-~~~~~~~~i~~~t~~~ 396 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKVFGIISGIEGLSGV-VSPALYGNIFALTLDD 396 (463)
T ss_pred HhHHHhhcccccccchhhHHHHHHHHhhh-hhHHHHHHHHHHHHHh
Confidence 89999999999999999999999999998 8999999998876543
No 187
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1e-09 Score=111.25 Aligned_cols=174 Identities=12% Similarity=0.111 Sum_probs=133.1
Q ss_pred HHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHH
Q 008210 355 LLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIIT 432 (574)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~ 432 (574)
.+.+....+..-...+-.-.+...+.++.+ ..+++...+.+...+..|+.|++.||+-|| +++.++..+-.++
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLA 111 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHH
Confidence 333344444333333333333344445664 567788899999999999999999999988 7788888888877
Q ss_pred HHHHHhcC-chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcc
Q 008210 433 YLLFASSI-DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQG 511 (574)
Q Consensus 433 ~~~~~~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~ 511 (574)
.+...+.+ .+.+.+...+.|+|-+...+..+.+++|.|+..+|++..++.+.+-.+|+. +|-.+.+.+.+.+
T Consensus 112 v~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg-lG~vvgs~va~~~------ 184 (493)
T KOG1330|consen 112 VFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG-LGYVVGSVVASLT------ 184 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc-eeEEeeeeeccCc------
Confidence 77666543 346677899999999999999999999999999999999999999999997 7776766666654
Q ss_pred cccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 512 FNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
+.|+++|++.+++.+++.++..++.++.+
T Consensus 185 --------------~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 185 --------------FWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred --------------cceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 34999999999999988887776666544
No 188
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.90 E-value=2.1e-08 Score=103.29 Aligned_cols=128 Identities=17% Similarity=0.176 Sum_probs=102.1
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAA 447 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 447 (574)
+...+|.+.+++|.+ +.++..+.+.++..++.+..|+++||+||| +.+..+.+...++.......+...+++.
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE-----RSVAAGLLLIAAGILIRSAPGTALLFAG 93 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 455688888898885 567889999999999999999999999999 5566666565665555433344466677
Q ss_pred HHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 448 TALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 448 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
.++.|++.+...+..+.++.|.++ ++++++.|+.+....+|.. +++.+.+.+.+.
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-i~~~~~~~l~~~ 148 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAA-LAAAATVPLAQH 148 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 788888888777777788888886 6899999999999999998 899888888766
No 189
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.89 E-value=6.2e-09 Score=103.40 Aligned_cols=143 Identities=17% Similarity=0.188 Sum_probs=126.0
Q ss_pred hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHH
Q 008210 385 DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID-GTLYAATALLGICYGVQFSIMI 463 (574)
Q Consensus 385 ~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~ 463 (574)
+.+++.+...+.+.+..++.|.+.||+|+| ..+.+++.++..+.+++.+.+. +.++++..+.|++.+.......
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~-----ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYK-----IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccc-----cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhH
Confidence 567888899999999999999999999999 7788899999999999887654 4788899999999999888888
Q ss_pred HHHHhhcCccc-hhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHH
Q 008210 464 PTVSELFGLEH-FGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVG 542 (574)
Q Consensus 464 ~~~~~~~~~~~-~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (574)
+++++.||.++ ||.++|+.-.+-++|.. +||+..|.+||.. |++..|.++++++++.
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~l-vgPpfGGilYe~~---------------------Gk~aPFlVL~~v~Lld 239 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVL-VGPPFGGILYEFA---------------------GKSAPFLVLAIVLLLD 239 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccce-ecCCcccchHhhc---------------------CCcCcHHHHHHHHHHH
Confidence 99999999877 69999999999999997 9999999999983 6899999999999988
Q ss_pred HHHHHHHhhhhh
Q 008210 543 SILSIILNIRIR 554 (574)
Q Consensus 543 ~~~~~~~~~~~~ 554 (574)
.++.+++.+.++
T Consensus 240 ~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 240 GALQLLVIEPTE 251 (464)
T ss_pred HHHHHheeCccc
Confidence 887766655433
No 190
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.87 E-value=1.4e-08 Score=100.31 Aligned_cols=111 Identities=23% Similarity=0.280 Sum_probs=95.3
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHH-HHHHHhhhccchhhhHHH
Q 008210 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYA-ATALLGICYGVQFSIMIP 464 (574)
Q Consensus 386 ~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~l~g~~~g~~~~~~~~ 464 (574)
++++-+.+.+..++..+.+|.++||+||| .++.++.+..++...+.........++ ...+.|+..|-. +..-+
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rA 143 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRA 143 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHH
Confidence 56788899999999999999999999999 788888888888777766655554444 488888887765 56678
Q ss_pred HHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 465 TVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 465 ~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
+++|++++|+++.+++.++++.++|-. +||.+.|++..
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfi-lGPmIGgyla~ 181 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFI-LGPMIGGYLAQ 181 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchh-hcchhhhHHHh
Confidence 999999999999999999999999987 99999999988
No 191
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.86 E-value=5.1e-08 Score=103.41 Aligned_cols=134 Identities=17% Similarity=0.130 Sum_probs=95.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc---------hHHHHHHHHHhhhccchh
Q 008210 389 LLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID---------GTLYAATALLGICYGVQF 459 (574)
Q Consensus 389 ~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~~l~~~~~l~g~~~g~~~ 459 (574)
..+...++..+|.+++|+++||+||| +.+..+.+...++.++....+. ..+++..++.|++.|+.+
T Consensus 68 ~~~~~~~~~~ig~~~~G~l~Dr~Grr-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~ 142 (432)
T PRK10406 68 VFAAGFLMRPIGGWLFGRIADKHGRK-----KSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEY 142 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcH-----HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhH
Confidence 34455566669999999999999999 6777777787777776654322 246678899999999999
Q ss_pred hhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHH
Q 008210 460 SIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVC 539 (574)
Q Consensus 460 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (574)
+....++.|.+|+++||...++.......|.. +++.+...+.....+.. ....+|+..|++.++..
T Consensus 143 ~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~-------------~~~~gWr~~F~i~~~~~ 208 (432)
T PRK10406 143 GTSATYMSEVAVEGRKGFYASFQYVTLIGGQL-LALLVVVVLQQTLEDAE-------------LREWGWRIPFALGAVLA 208 (432)
T ss_pred hhHHHHHHHhCCCCcccHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHH-------------HhccchHHHHHHHHHHH
Confidence 99999999999999999999988777766665 66654433322110000 00036999998766655
Q ss_pred HH
Q 008210 540 CV 541 (574)
Q Consensus 540 ~~ 541 (574)
++
T Consensus 209 ll 210 (432)
T PRK10406 209 VV 210 (432)
T ss_pred HH
Confidence 44
No 192
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.85 E-value=5.6e-08 Score=100.62 Aligned_cols=157 Identities=8% Similarity=0.069 Sum_probs=125.4
Q ss_pred cHHHHHHhhCCc--h-hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHH
Q 008210 373 NLAQIGIAQGVH--D-TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAAT 448 (574)
Q Consensus 373 ~~~~~~~~~g~~--~-~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 448 (574)
..|++.+++|++ + .+.+.+.+..+..+..+.+|+++||+|.| +++..+.+..++...+.... +...+.+..
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556678885 4 56789999999999999999999999999 67777777777766666654 345778889
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
++.|++.|..+ ....++.+.+|+++|+++.|+...+..+|.+ +++++.+.+ ...+. ..|
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~-Ia~~L~qll-~s~gW------------------r~y 181 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVF-LSSVLGQLL-VTLGW------------------ISY 181 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HhcCc------------------hhH
Confidence 99999999999 8889999999999999999999999999998 888888884 33221 246
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008210 529 RITFFVLAGVCCVGSILSIILNIRIRP 555 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (574)
....++..+...+++++++++.+..|.
T Consensus 182 ~~Ln~Isl~s~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 182 STLNIISLVFMTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchh
Confidence 777777777778888888777654443
No 193
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.85 E-value=1.2e-07 Score=98.80 Aligned_cols=137 Identities=12% Similarity=0.123 Sum_probs=107.5
Q ss_pred chHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHH
Q 008210 34 YSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (574)
Q Consensus 34 ~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (574)
+.|.+.+++|.+..+++.......+..+. .++.+++.||+|+|+.+.++.+...+.++.+... ++.+.++..
T Consensus 227 ~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 299 (382)
T TIGR00902 227 FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-------EAFPLIFLL 299 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------hhHHHHHHH
Confidence 44555567999999999865555556554 8899999999999999999999999887654322 367888889
Q ss_pred HHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHH-hhhhhHHHHHHHHHHHhccCChhHHHHHHHH
Q 008210 113 LCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILK-GYGGLSAAVFTEIYNMLLHNSSSKLLLVLAV 178 (574)
Q Consensus 113 ~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~-~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~ 178 (574)
.++.|+..+...++...++.+. | ++|+++.++.+ ...++|..+++.+.+.+.+..+...++..+.
T Consensus 300 q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~ 366 (382)
T TIGR00902 300 QILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAI 366 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 9999999999999999899987 7 58899999975 5778999999999988877654443443333
No 194
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.85 E-value=4.4e-06 Score=85.57 Aligned_cols=163 Identities=10% Similarity=-0.015 Sum_probs=113.7
Q ss_pred HhhhccchhhcchHHHHhh-hCCCHHHHHH-HHH-HHHhhhhccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhh
Q 008210 23 IAAGNAYNFPLYSHSLKSV-LGFNQHQLTM-LGV-ANDIGENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSR 99 (574)
Q Consensus 23 ~~~g~~~~~~~~~~~l~~~-l~~s~~~~~~-i~~-~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~ 99 (574)
+.....-.-+.+.|++.+. .|++..|+.- +.= .........++...+.|..+.|++++++.+...+.+.++.+.
T Consensus 15 f~~~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--- 91 (412)
T PF01770_consen 15 FFKEFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--- 91 (412)
T ss_pred HHHhcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH---
Confidence 3333444556677888775 8999999987 422 222222347889999999999999999999888777664333
Q ss_pred ccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHhccC--ChhHHHHHH
Q 008210 100 TVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN--SSSKLLLVL 176 (574)
Q Consensus 100 ~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~--~~~~~~~~~ 176 (574)
++.+.+-+.-+..|++.+.. .+-..++-...| ++-.++++...+..-.|-.+++.+++.+... .+...+..+
T Consensus 92 ----~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~i 166 (412)
T PF01770_consen 92 ----TSVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYI 166 (412)
T ss_pred ----CcHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 36788899999999988864 455566666666 5778899999998888888888888876542 344555555
Q ss_pred HHHHHHHHHHHHHhccc
Q 008210 177 AVGVPAVCLVMMYFVRP 193 (574)
Q Consensus 177 ~~~~~~~~~~~~~~~~~ 193 (574)
......++++..++++.
T Consensus 167 sl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 167 SLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 55555555555555543
No 195
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.85 E-value=4.5e-08 Score=102.88 Aligned_cols=127 Identities=12% Similarity=0.033 Sum_probs=105.0
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh---c-CchHHH
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS---S-IDGTLY 445 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~---~-~~~~l~ 445 (574)
...|.+.+++|.+ +.++..+...++..++.+..|++.||+||| ..+..+.++.+++..++.. . +...++
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l 98 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLYALGAFLFWPAAEIMNYTLFL 98 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 4567777778885 567888999999999999999999999999 6778788888888776532 1 223556
Q ss_pred HHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 446 AATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 446 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
+..++.|++.|...+....++.+..|++++++..++.+....+|.. ++|.+.+.+...
T Consensus 99 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-~g~~i~~~l~~~ 156 (410)
T TIGR00885 99 VGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSI-IGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 6778889999998888888999999999999999999999999998 899998888643
No 196
>PTZ00207 hypothetical protein; Provisional
Probab=98.84 E-value=5e-08 Score=105.39 Aligned_cols=149 Identities=14% Similarity=0.091 Sum_probs=105.5
Q ss_pred ccHHHHHHhhCCch--hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-------Cch
Q 008210 372 NNLAQIGIAQGVHD--TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-------IDG 442 (574)
Q Consensus 372 ~~~~~~~~~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~ 442 (574)
.+.+.+.+++|+++ .++..+... ......+..|++.||+|+| .++.++.++..++.++.+.. +.+
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~i~~s~~ 121 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhcccccCcHH
Confidence 44566667788864 334443322 2234566789999999999 78888888888888877653 234
Q ss_pred HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccc
Q 008210 443 TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSC 522 (574)
Q Consensus 443 ~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~ 522 (574)
.+++..++.|++.+..++....++.+.|| ++||.+.|+...+.++|+.++++...+++.+.
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~------------------ 182 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDN------------------ 182 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 56677788888888777777788889996 78899999999999999986677555554322
Q ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 523 LGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
++..|++.++..++..++.+.+.
T Consensus 183 -----~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 183 -----TSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhhe
Confidence 56667777666666555544443
No 197
>PRK09952 shikimate transporter; Provisional
Probab=98.83 E-value=1.1e-07 Score=100.93 Aligned_cols=130 Identities=17% Similarity=0.070 Sum_probs=96.3
Q ss_pred HHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCch---------HHHHHHHHHhhhccchhhhH
Q 008210 392 LFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDG---------TLYAATALLGICYGVQFSIM 462 (574)
Q Consensus 392 ~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------~l~~~~~l~g~~~g~~~~~~ 462 (574)
...++..+|.++.|+++||+||| ..+.++.+...++..+....+.. .+++...+.|++.|+.++..
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~ 146 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRK-----RMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGA 146 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccH-----HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHH
Confidence 34455678888899999999999 67777888888877776654432 36667889999999999988
Q ss_pred HHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHH
Q 008210 463 IPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCC 540 (574)
Q Consensus 463 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (574)
..++.|.+|+++||...+....+..+|.. +++.+...+........ ....+|+..|++.++..+
T Consensus 147 ~~~~~e~~p~~~rg~~~~~~~~g~~~G~~-l~~~~~~~l~~~~~~~~-------------~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 147 ALLAVESAPKNKKAFYSSGVQVGYGVGLL-LSTGLVSLISMMTTDEQ-------------FLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHH-------------hhccChHHHHHHHHHHHH
Confidence 99999999999999999998888888886 67666666543211100 001369999987665443
No 198
>PRK15075 citrate-proton symporter; Provisional
Probab=98.83 E-value=8.2e-08 Score=101.87 Aligned_cols=141 Identities=16% Similarity=0.090 Sum_probs=99.2
Q ss_pred HHHHHHhhcccceeeeccHHHHHHhhCCch---hhHHHHHH-----HHHHhhhhhhhhhhhhhhhccccCchhhHHHHHH
Q 008210 356 LFLVYFAGVGSGVTVLNNLAQIGIAQGVHD---TTILLSLF-----SFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQV 427 (574)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~-----~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 427 (574)
.++..++.......+....|.+.++++.++ ..+..+.. .+...+|.+..|+++||+||| +.+..+.+
T Consensus 20 ~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr-----~~l~~~~~ 94 (434)
T PRK15075 20 VTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR-----KGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH-----HHHHHHHH
Confidence 333444443333444556777778887643 22222222 222346788999999999999 66777777
Q ss_pred HHHHHHHHHHhcCch---------HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH
Q 008210 428 IMIITYLLFASSIDG---------TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA 498 (574)
Q Consensus 428 ~~~i~~~~~~~~~~~---------~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~ 498 (574)
...++..+....+.. .+++..++.|++.+..++....+++|.+|+++|+.+.++.....+++.. +++.+.
T Consensus 95 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~-~g~~~g 173 (434)
T PRK15075 95 IMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV-FAALLG 173 (434)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH-HHHHHH
Confidence 777777766654332 2466788999999998888889999999999999999999888888876 777666
Q ss_pred Hhhh
Q 008210 499 GYIY 502 (574)
Q Consensus 499 g~l~ 502 (574)
+.+.
T Consensus 174 ~~l~ 177 (434)
T PRK15075 174 YLLN 177 (434)
T ss_pred HHHH
Confidence 6554
No 199
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.80 E-value=4.9e-08 Score=101.45 Aligned_cols=145 Identities=16% Similarity=0.043 Sum_probs=97.7
Q ss_pred cchhhcchHHH-HhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 008210 28 AYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (574)
Q Consensus 28 ~~~~~~~~~~l-~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 105 (574)
.+....+.|.+ ++++|.+..+.+++.....+... ..++.|++.||+|+|+.+.++..+..+........ ...+++
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 311 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA---LLDSGS 311 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH---HhcCCc
Confidence 33444445544 47789999998886555555554 48999999999999998776555444332111111 111124
Q ss_pred HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHH-HhhhhhHHHHHHHHHHHhccCCh-hHHHHH
Q 008210 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGIL-KGYGGLSAAVFTEIYNMLLHNSS-SKLLLV 175 (574)
Q Consensus 106 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~-~~~~~~g~~i~~~i~~~l~~~~~-~~~~~~ 175 (574)
.+.+++..++.|++.+..++.....+.+.+| ++|+++.++. ..+..+|..++|.+.+.+.+..+ |+...+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~ 384 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGY 384 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHH
Confidence 5666777888898888888888889999998 5799999884 45556777788888887765433 444433
No 200
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=4.2e-08 Score=98.80 Aligned_cols=152 Identities=18% Similarity=0.239 Sum_probs=114.4
Q ss_pred HHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc--Cc--hHHHHHH
Q 008210 375 AQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS--ID--GTLYAAT 448 (574)
Q Consensus 375 ~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~--~~--~~l~~~~ 448 (574)
+.+-++.+++ +..+++++..+.+.+.|+.-|.+.||+|.| ++...+.++..+..+..... ++ +.+++..
T Consensus 38 ~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR-----~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~g 112 (417)
T COG2223 38 VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR-----KWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIG 112 (417)
T ss_pred hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch-----HHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 3344667775 567899999999999999999999999999 67777777877777766532 22 2566677
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
.+.|++ |+.|+.....+++.||+|++|.+.|+.. .+++|.. +...++..+....+. +.|
T Consensus 113 ll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~a-v~q~~~P~v~~~~g~------------------~~w 171 (417)
T COG2223 113 LLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVA-VAQLVAPLVAVAFGF------------------LAW 171 (417)
T ss_pred HHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHH-HHHHHHHHHHHHHhh------------------HHH
Confidence 777775 6667888889999999999999999998 8888887 777777777766310 027
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 529 RITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+.+..+.....++..+..++....
T Consensus 172 ~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 172 RNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 777777777777766666655543
No 201
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.77 E-value=7.2e-08 Score=104.31 Aligned_cols=112 Identities=18% Similarity=0.122 Sum_probs=92.9
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-------chHHHHHHHHHhhhccch
Q 008210 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-------DGTLYAATALLGICYGVQ 458 (574)
Q Consensus 386 ~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~l~~~~~l~g~~~g~~ 458 (574)
.++..+...++..++.+++|+++||+||| ..+..+.++..++.++..... ...+++...+.|++.|..
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~Grr-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKLGRK-----RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccH-----HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence 45788889999999999999999999999 666666666666665544322 235677888999999999
Q ss_pred hhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 459 FSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 459 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
++..+.+++|.+|+++||.+.++.+....+|.. +++.+...+..
T Consensus 133 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~-~g~~~~~~~~~ 176 (502)
T TIGR00887 133 YPLSAIITSEFATKKWRGAMMAAVFAMQGFGIL-AGAIVALIVLA 176 (502)
T ss_pred hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 999999999999999999999999999999987 88877766544
No 202
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.77 E-value=1.5e-07 Score=101.45 Aligned_cols=172 Identities=16% Similarity=0.177 Sum_probs=116.3
Q ss_pred hchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCch--hhHHHHHHHHHHhhhhhhhhhhhhhh-----hccccCchhh
Q 008210 349 VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHD--TTILLSLFSFCNFVGRLGGGVVSEHF-----VRKTIPRTIW 421 (574)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~-----g~r~~~~~~~ 421 (574)
++|+.+.++...+............+|.+.++.|.+. .+.. +..... .++.+++|.++||+ |||| .+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr----~~ 83 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQA-YVFKFLWSPLMDRYTPPFLGRRR----GW 83 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCCCch----HH
Confidence 4444444444444333333334445777777777753 2322 222222 26889999999999 7772 24
Q ss_pred HHHHHHHHHHHHHHHHhcC----chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 422 MTCTQVIMIITYLLFASSI----DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 422 ~~~~~~~~~i~~~~~~~~~----~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
+..+.+...++...+.... ...+.+...+.+++.+...+...++..|.+|+++|+.+.++...+..+|.. +++.+
T Consensus 84 ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~l-lg~~l 162 (491)
T PRK11010 84 LLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAML-VSGGL 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH-HHHHH
Confidence 5555566656655544322 224555677778888887788889999999999999999999999999988 88888
Q ss_pred HHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 498 AGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 498 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
.+++.++. .+|+..|++.++..+++.+..+
T Consensus 163 ~~~l~~~~--------------------~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 163 ALWLADRY--------------------LGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHHhcc--------------------cCHHHHHHHHHHHHHHHHHHHH
Confidence 88888731 2599999998877776655444
No 203
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.76 E-value=7.7e-08 Score=103.38 Aligned_cols=173 Identities=15% Similarity=0.093 Sum_probs=123.0
Q ss_pred HHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhH
Q 008210 345 TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWM 422 (574)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~ 422 (574)
+..+|+|.|..+++.......+.......++-+..++.-+ ..++......+..++..+.+|.+.||+.|| .++
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr-----ril 78 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRR-----RIL 78 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch-----HHH
Confidence 3457888888888777665444333333344444444332 234455566677778889999999999999 455
Q ss_pred HHHHHHHHHHHHHHH---h---cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHh
Q 008210 423 TCTQVIMIITYLLFA---S---SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGL 496 (574)
Q Consensus 423 ~~~~~~~~i~~~~~~---~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~ 496 (574)
..+-++..+....+. . .+++.+++..++.|++.....|...+++.|+.|+++...+.++..+..++... +||.
T Consensus 79 i~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~-iGPa 157 (524)
T PF05977_consen 79 ILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARI-IGPA 157 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHh-ccch
Confidence 555544443322222 1 23456777888999999898999999999999999999999999999999998 8999
Q ss_pred HHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHH
Q 008210 497 LAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 497 l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (574)
++|.+.... +...+|.+.+++.++.+.
T Consensus 158 lgG~Lva~~---------------------G~~~~f~inalsfl~~i~ 184 (524)
T PF05977_consen 158 LGGILVAFF---------------------GAAAAFLINALSFLISIL 184 (524)
T ss_pred HHHHHHHHH---------------------HHHHHHHHHHHHHHHHHH
Confidence 999998874 356677777766655443
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=98.76 E-value=6.1e-08 Score=104.99 Aligned_cols=144 Identities=16% Similarity=0.145 Sum_probs=112.0
Q ss_pred cHHHHHHhhCCc-----hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHHHH
Q 008210 373 NLAQIGIAQGVH-----DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTLYA 446 (574)
Q Consensus 373 ~~~~~~~~~g~~-----~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 446 (574)
..+.+.++++.+ +.++..+.+.++..++.++.|+++||+||| .++..+.++..++.++....+ ...+++
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 185 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRK-----KVLLLSTLVTAVSGVLTAFSPNYTVFLV 185 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccch-----HHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 344555666663 356788899999999999999999999999 566667777777666655443 446777
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
..++.|++.+...+....++.|.+|+++|+.+.++...+..+|.. ++|.+.+.+ ..
T Consensus 186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~-~~---------------------- 241 (505)
T TIGR00898 186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLV-LLPLVAYFI-PD---------------------- 241 (505)
T ss_pred HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHH-HHHHHHHHh-hH----------------------
Confidence 888999999999999999999999999999999999888888877 788665443 22
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 008210 527 CFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~ 546 (574)
|+..+++.++..++..+..
T Consensus 242 -wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 242 -WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 7888888777666655544
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.74 E-value=8e-08 Score=114.51 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=104.6
Q ss_pred HhhhchhHHHHHHHHHhhcccceeeeccHHHH----HH-hhCCc---hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccC
Q 008210 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQI----GI-AQGVH---DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIP 417 (574)
Q Consensus 346 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~g~~---~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~ 417 (574)
.++++++|+.+++..++....-......+..+ .. +.+.+ ..++..+.+.+..++..+++|+++||++||+.-
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 45666777766666555433211111111111 11 12221 234566677888899999999999999999310
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 418 RTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 418 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
+ .+..+..+..+.+.......+.+.+++..++.|++.+...+...+++.+.+++++++.++|+.+++.+++.. +||.+
T Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~-igp~l 163 (1140)
T PRK06814 86 K-ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAIL-LGTII 163 (1140)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHH-HHHHH
Confidence 0 011111222222222222244567888899999999999999999999999999999999999999999998 99999
Q ss_pred HHhhhhh
Q 008210 498 AGYIYDN 504 (574)
Q Consensus 498 ~g~l~~~ 504 (574)
.|++.+.
T Consensus 164 ~g~l~~~ 170 (1140)
T PRK06814 164 GGLATIS 170 (1140)
T ss_pred HHHHHhc
Confidence 9999887
No 206
>PRK10133 L-fucose transporter; Provisional
Probab=98.72 E-value=2.1e-07 Score=98.74 Aligned_cols=144 Identities=15% Similarity=0.087 Sum_probs=108.7
Q ss_pred HHHHHHHHHhhcccceeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHH
Q 008210 353 FWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMI 430 (574)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~ 430 (574)
+..+.+.++.............|.+.+++|.+ +.++..+.+.++..++.+..|++.||+||| +.+..+.++..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r-----~~l~~g~~~~~ 102 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK-----AGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHH
Confidence 34444444443333344445677777778885 567888899999999999999999999999 67888888888
Q ss_pred HHHHHHH---hc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 431 ITYLLFA---SS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 431 i~~~~~~---~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
++.++.. .. +...+++..++.|++.|...+....++.+..+.++++...++......+|.. ++|.+.+.+.
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~-~g~~~g~~l~ 177 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAI-IAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 8876642 22 3346677889999999998888888888876666666678999999999998 8997766554
No 207
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.70 E-value=1.9e-07 Score=98.00 Aligned_cols=148 Identities=18% Similarity=0.166 Sum_probs=105.7
Q ss_pred eeccHHHHHHhhCCch--hhHHHHHHHHHHhhhhhhhhhhhhhh-----hccccCchhhHHHHHHHHHHHHHHHHhcC--
Q 008210 370 VLNNLAQIGIAQGVHD--TTILLSLFSFCNFVGRLGGGVVSEHF-----VRKTIPRTIWMTCTQVIMIITYLLFASSI-- 440 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~-----g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-- 440 (574)
....+|.++++.|++. -+++...... .+..+++|+++||+ |||| .++.++.+...+++..+....
T Consensus 18 ~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr----~~l~~~~~~~~l~~~~l~~~~~~ 91 (402)
T PRK11902 18 TSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRR----GWLLLTQVGLAASIAAMAFCPPH 91 (402)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcch----hHHHHHHHHHHHHHHHHHhcCcc
Confidence 3456888999999963 3433323222 58899999999999 6762 345555555655555544321
Q ss_pred --chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCC
Q 008210 441 --DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSN 518 (574)
Q Consensus 441 --~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~ 518 (574)
.+.+++..++.+++.+...+...+++.|.+|+|+|+.+.++...+..++.. +++.+.+.+.+..
T Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i-~g~~l~~~l~~~~------------- 157 (402)
T PRK11902 92 AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAML-VSGGLALWLADRV------------- 157 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHH-HHhHHHHHHHhcc-------------
Confidence 123444555667777777788889999999999999999999999899987 8888888887752
Q ss_pred cccccCCccchhHHHHHHHHHHHHHH
Q 008210 519 VVSCLGPNCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (574)
.+|+..|++.++..+++.+
T Consensus 158 -------~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 158 -------LGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred -------cCHHHHHHHHHHHHHHHHH
Confidence 2599999988877665544
No 208
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.68 E-value=3.5e-08 Score=109.06 Aligned_cols=128 Identities=14% Similarity=0.093 Sum_probs=104.8
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC---------
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI--------- 440 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~--------- 440 (574)
..++++.++++++ +.+++.+.+.++..++.+..+++.||.||| .++.++.++++++.++.+.++
T Consensus 54 ~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 54 SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 3456666677774 567889999999999999999999999998 456666677777776654321
Q ss_pred ------------------------------------------ch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhh
Q 008210 441 ------------------------------------------DG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGL 477 (574)
Q Consensus 441 ------------------------------------------~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~ 477 (574)
.. .+++..++.|+|.+..++....++.|.+|+++++.
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 11 34568899999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 478 ISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 478 ~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
..|+.+....+|.. +|+.+.+++.+..
T Consensus 209 ~~~i~~~~~~iG~~-lG~llgg~l~~~~ 235 (633)
T TIGR00805 209 YIGILESIAVFGPA-FGYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHHHHHhhhH-HHHHHHHHHHhcc
Confidence 99999999999998 8999999988653
No 209
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=1.5e-07 Score=102.43 Aligned_cols=130 Identities=21% Similarity=0.180 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHhhhccchhhhHHH
Q 008210 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID-GTLYAATALLGICYGVQFSIMIP 464 (574)
Q Consensus 386 ~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~l~g~~~g~~~~~~~~ 464 (574)
..+..+++.++..+|.+++|.++||+||| .++.++.++..++-+..+..+. ....+..++.|++.++.......
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~ 194 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFG 194 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHh
Confidence 45677889999999999999999999999 7788888888887776665544 47778899999999999999999
Q ss_pred HHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHH
Q 008210 465 TVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 465 ~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (574)
+++|.+++++|+.+..+ ......++. ++|.+.+++... |+..+++.....++.++
T Consensus 195 ~~~E~~~~~~R~~~~~~-~~~~~~~~~-~~~~~~a~~~~~-----------------------Wr~~~~~~~~~~~~~~~ 249 (521)
T KOG0255|consen 195 LVAEIVSPKQRGLALTL-GGFFFVGGL-MLPAGAAYITRD-----------------------WRWLFWIISIPSGLFLL 249 (521)
T ss_pred hheeecCcchhhHHHHH-HHHHHHHHH-HHHHHHHHHHhh-----------------------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999 766777776 788888888774 89999988887777655
Q ss_pred H
Q 008210 545 L 545 (574)
Q Consensus 545 ~ 545 (574)
.
T Consensus 250 ~ 250 (521)
T KOG0255|consen 250 L 250 (521)
T ss_pred H
Confidence 5
No 210
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.68 E-value=1.4e-07 Score=112.67 Aligned_cols=152 Identities=16% Similarity=0.138 Sum_probs=107.8
Q ss_pred hhhchhHHHHHHHHHhhcccceeeeccH-HHHHHhhCCc----hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhh
Q 008210 347 AVVKADFWLLFLVYFAGVGSGVTVLNNL-AQIGIAQGVH----DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIW 421 (574)
Q Consensus 347 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~----~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~ 421 (574)
.++++.|+.+++..++...........+ +.+..+++.+ ..++..+++.++..++.+.+|+++||+||| .+
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk-----~~ 79 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN-----RV 79 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH-----HH
Confidence 4566677776666655433332222222 2233334443 235667788888999999999999999999 45
Q ss_pred HHHHHHHHHHHHHHHH----hcCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 422 MTCTQVIMIITYLLFA----SSIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 422 ~~~~~~~~~i~~~~~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
+..+.++..+..++.. ..+...+++..++.|++.+...+....+++|.+|+++++.++|+..++..+|.. +||.+
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~-lg~~l 158 (1146)
T PRK08633 80 IRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAIL-AGTAL 158 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHH-HHHHH
Confidence 5554443333332221 223446777888999999999999999999999999999999999999999998 89999
Q ss_pred HHhhhhh
Q 008210 498 AGYIYDN 504 (574)
Q Consensus 498 ~g~l~~~ 504 (574)
++++.+.
T Consensus 159 ~~~l~~~ 165 (1146)
T PRK08633 159 FSFLFES 165 (1146)
T ss_pred HHHHHHh
Confidence 9998875
No 211
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.67 E-value=4.2e-07 Score=93.66 Aligned_cols=161 Identities=18% Similarity=0.159 Sum_probs=105.8
Q ss_pred ccHHHHHHhhCCchh--hHHHHHHHHHHhhhhhhhhhhhhhh-----hccccCchhhHHHHHHHHHHHHHHHHhcCc---
Q 008210 372 NNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGGVVSEHF-----VRKTIPRTIWMTCTQVIMIITYLLFASSID--- 441 (574)
Q Consensus 372 ~~~~~~~~~~g~~~~--~~~~~~~~i~~~ig~~~~G~l~Dr~-----g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~--- 441 (574)
..+|.+.++.|++.. ++.. ...+...+ .+++|+++||+ |||| .++..+.+...+....+.+..+
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~-~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~----~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFS-LVGLPYSL-KFLWSPLVDTVYLPFFGRRR----SWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHH-HHHHHHHH-HHHHHHHHhcccCCCCCccH----HHHHHHHHHHHHHHHHHHcCCcchh
Confidence 356778888888643 3332 22333333 89999999998 5652 2344455555555444443221
Q ss_pred -hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcc
Q 008210 442 -GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVV 520 (574)
Q Consensus 442 -~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~ 520 (574)
..+.....+.+++.+...+...+++.|.+|+|+|+.+.|+...+..+|.. +++.+.+.+.+..+...
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~l~~~l~~~~g~~~----------- 150 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGML-LSGSLALVLASPEFANT----------- 150 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHH-HHHHHHHHHhhhccccc-----------
Confidence 23344445666777777777888999999999999999999999999987 89989988877642100
Q ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 521 SCLGPNCFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
....+|+..|++.+++.+++.+..++..+|
T Consensus 151 --~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 151 --GLITLWGYIFFWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred --ccccccHHHHHHHHHHHHHHHHHHHHhccC
Confidence 011249999988887776655544433333
No 212
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.66 E-value=2.8e-07 Score=95.08 Aligned_cols=145 Identities=17% Similarity=0.230 Sum_probs=116.9
Q ss_pred hCCch--hhHHHHHHHHHHhhhhhhhhhhhhhh-hccccCchhhHHHHHHHHHHHHHHHHhcC---chHHHHHHHHHhhh
Q 008210 381 QGVHD--TTILLSLFSFCNFVGRLGGGVVSEHF-VRKTIPRTIWMTCTQVIMIITYLLFASSI---DGTLYAATALLGIC 454 (574)
Q Consensus 381 ~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~l~g~~ 454 (574)
+|+++ +.-+.+.+...-=+..+++||++||+ |+| ..+.++.+++.+|.+++..++ +..+++...++++|
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-----~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG 130 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-----RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVG 130 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhc
Confidence 34653 34455556555567788999999995 777 678888899999999888653 45888899999999
Q ss_pred ccchhhhHHHHHHhhcCccc--hhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHH
Q 008210 455 YGVQFSIMIPTVSELFGLEH--FGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITF 532 (574)
Q Consensus 455 ~g~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (574)
.|..=+....++.|.+|+++ |-...++.+++-++|++ ++|.+.+++.+++ +|+..|
T Consensus 131 ~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl-~~p~i~~~~~~~~---------------------g~~~gF 188 (498)
T COG3104 131 TGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL-IAPIITGLLAINY---------------------GWHVGF 188 (498)
T ss_pred cccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH-HHHHHHHHHHHhh---------------------CHHHHH
Confidence 99998999999999998866 67788889999999998 9999999999984 589999
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 008210 533 FVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~ 552 (574)
...++-..++++..+..+++
T Consensus 189 ~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 189 GLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHHHHHHHHHccch
Confidence 98888888877666554443
No 213
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.2e-07 Score=100.11 Aligned_cols=141 Identities=17% Similarity=0.226 Sum_probs=120.7
Q ss_pred hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc---CchHHHHHHHHHhhhccchhhh
Q 008210 385 DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS---IDGTLYAATALLGICYGVQFSI 461 (574)
Q Consensus 385 ~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~l~g~~~g~~~~~ 461 (574)
+.+++.+.+..+..++.+.+|++.||+|.| +++..+.++.+++.++.... +.+.+++..++.|++.|..+|.
T Consensus 74 ~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa 148 (466)
T KOG2532|consen 74 EKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPA 148 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhh
Confidence 567889999999999999999999999999 67777777777777766532 3346788899999999999999
Q ss_pred HHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHH
Q 008210 462 MIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCV 541 (574)
Q Consensus 462 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (574)
+..+.++-.|+++|++..++...+.++|.. ++-++.|++.+.. .||+..|++.++++++
T Consensus 149 ~~~i~~~W~P~~Ers~~~ail~~g~q~g~v-~~mp~sg~lc~s~--------------------~GW~sifY~~g~~g~i 207 (466)
T KOG2532|consen 149 IGSILAKWAPPNERSTFIAILTAGSQLGTI-ITMPVSGLLCESS--------------------LGWPSIFYVFGIVGLI 207 (466)
T ss_pred hhceeeeECCHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHhccC--------------------CCCchHHHHHHHHHHH
Confidence 999999999999999999999999999998 7777999998883 3699999999998888
Q ss_pred HHHHHHHHhh
Q 008210 542 GSILSIILNI 551 (574)
Q Consensus 542 ~~~~~~~~~~ 551 (574)
-.++.+.+..
T Consensus 208 ~~~~w~~~~~ 217 (466)
T KOG2532|consen 208 WFILWFLFYS 217 (466)
T ss_pred HHHHHHHHhc
Confidence 7666555543
No 214
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.65 E-value=2.7e-07 Score=97.59 Aligned_cols=172 Identities=9% Similarity=0.088 Sum_probs=112.0
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhh----hhhccccCchhhHHHHHHHHHHHHHHHHhcCch-
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSE----HFVRKTIPRTIWMTCTQVIMIITYLLFASSIDG- 442 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~D----r~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~- 442 (574)
...+++.|.+.+|.+ ..+.......+.+.+..|+.|+++| |+|||| ..+..+.+...+++.++......
T Consensus 23 ~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr----p~il~g~~~~~~~l~ll~~~~~~~ 98 (477)
T TIGR01301 23 QLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR----PFIAAGAALVAFAVILIGFAADIG 98 (477)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH----HHHHHHHHHHHHHHHHHHhCchhh
Confidence 345677788888885 4566777888999999999999999 599883 23443455555565555432110
Q ss_pred -----------------HHHHHHHHHhhhccchhhhHHHHHHhhcCccch--hhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 443 -----------------TLYAATALLGICYGVQFSIMIPTVSELFGLEHF--GLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 443 -----------------~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
...+...+..++.....+...++++|..|++++ +.+.+..+...++|+. +|+.+.+....
T Consensus 99 ~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i-lg~~~g~~~~~ 177 (477)
T TIGR01301 99 HLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNV-LGYAAGAYSGL 177 (477)
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhH
Confidence 111222233445665666677899999998865 6899999999999998 89966665421
Q ss_pred hhhhhhcccccccCCcccc-cCCccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 008210 504 NEAAKQQGFNLLTSNVVSC-LGPNCFRITFFVLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (574)
...-.. .+..+| ..+.+++..|++.+++.+++.++.++..+|.
T Consensus 178 ~~~~~~-------~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 178 YKIFPF-------TKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHhccc-------ccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 110000 011122 2234688999998888888877776666554
No 215
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.64 E-value=1.2e-06 Score=91.30 Aligned_cols=128 Identities=9% Similarity=0.037 Sum_probs=96.4
Q ss_pred HHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHH
Q 008210 36 HSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALC 114 (574)
Q Consensus 36 ~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (574)
|.+.++.|.+..+.+.+.....+..+. .++.|++.||+|+|+++.++.+...++.+++. .. ++.+.+++..+
T Consensus 229 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~ 301 (382)
T PRK11128 229 AIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMG-----ST--TALPWLIVIQI 301 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-----hh--hhHHHHHHHHH
Confidence 444467899999999855555555544 89999999999999999988888777754422 22 35677888899
Q ss_pred HHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHH-hhhhhHHHHHHHHHHHhccCChh
Q 008210 115 VATNSSAWLGTAVLVTNMRNFPLSRGTVAGILK-GYGGLSAAVFTEIYNMLLHNSSS 170 (574)
Q Consensus 115 l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~-~~~~~g~~i~~~i~~~l~~~~~~ 170 (574)
+.|++.+...+....++.+..+++++++.+... ...+.|..+++.+.+.+.+...+
T Consensus 302 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 999999988777777777765567888888876 55667778888888887765444
No 216
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.64 E-value=9e-06 Score=84.64 Aligned_cols=104 Identities=14% Similarity=-0.040 Sum_probs=82.0
Q ss_pred HHHHHhhhhccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHH
Q 008210 53 GVANDIGENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNM 132 (574)
Q Consensus 53 ~~~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~ 132 (574)
...+...+..+++++.+.|+.|+|+.+.+|......-.+.+.. +|-+.+++...+.|+|.+..+...-.+.+
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~--------~N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF--------PNSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh--------cchHHHHHHHHHhhhhHHheecccceehh
Confidence 3344444556999999999999999999998877665333221 34578899999999999999999999999
Q ss_pred hhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 133 RNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 133 ~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
++.+ +++.+..++.++.+..+.++++.+...+
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 9997 5789999999998888877776655443
No 217
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.57 E-value=2e-06 Score=89.81 Aligned_cols=147 Identities=12% Similarity=0.028 Sum_probs=96.1
Q ss_pred HHHHhhhCCCHHHHHHHHHHH-Hhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHH
Q 008210 36 HSLKSVLGFNQHQLTMLGVAN-DIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIAL 113 (574)
Q Consensus 36 ~~l~~~l~~s~~~~~~i~~~~-~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 113 (574)
+.+.+|.|++.++++++.... .....+ .++.|++.||+|+|+++..+.++..+..+. ..........++.+.++...
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALL-WFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHHcccCCcHHHHHHHH
Confidence 334456899999999954443 345555 789999999999999988877665333222 11111111111233444555
Q ss_pred HHHHhhhHhhhhHHHHHHHhhCC--CCcchHHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHH
Q 008210 114 CVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAV 183 (574)
Q Consensus 114 ~l~G~g~g~~~~~~~~~~~~~fp--~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~ 183 (574)
++.+++.|..++.....+.++.+ +++|+..++.++..++|..++|.+.+.+.+..++...+.......++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVL 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 66667777776666667667764 57899999999999999999999988876644444444444433333
No 218
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.49 E-value=4e-06 Score=89.22 Aligned_cols=165 Identities=17% Similarity=0.184 Sum_probs=115.0
Q ss_pred hccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCCh--HHHHHHHHHHHHHHHHHHH--HHhhc
Q 008210 26 GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPW--LVLFIGSLACFFGYGVLWL--AVSRT 100 (574)
Q Consensus 26 g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r--~~~~~g~~~~~~g~~~~~~--~~~~~ 100 (574)
|...+........++++|++.++...+.....+.... ++++|++.||+|.| +++.++++...+-++.-.+ .....
T Consensus 296 g~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~ 375 (477)
T PF11700_consen 296 GVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFF 375 (477)
T ss_pred HHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 4444444444556779999999988866666666654 99999999999999 8888777666433222111 00000
Q ss_pred cCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccC-ChhHHHHHHHH
Q 008210 101 VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAV 178 (574)
Q Consensus 101 ~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~-~~~~~~~~~~~ 178 (574)
-. .+-|.+++..++.|+..|..++.+..+.++..|+ +.+...|++....-.++.++|.+.+.+.+. ++.|+-+....
T Consensus 376 g~-~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~ 454 (477)
T PF11700_consen 376 GL-KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLL 454 (477)
T ss_pred Cc-ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 01 2458899999999999999999999999999995 789999999988888888888887776542 23344444444
Q ss_pred HHHHHHHHHHHhc
Q 008210 179 GVPAVCLVMMYFV 191 (574)
Q Consensus 179 ~~~~~~~~~~~~~ 191 (574)
+..+++.++.+.+
T Consensus 455 ~lf~~gl~ll~~v 467 (477)
T PF11700_consen 455 VLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHhhc
Confidence 4555555555444
No 219
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.48 E-value=1e-06 Score=95.60 Aligned_cols=138 Identities=16% Similarity=0.147 Sum_probs=110.6
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHH
Q 008210 387 TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPT 465 (574)
Q Consensus 387 ~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~ 465 (574)
+++.+...++..+|.+..|+++|++||| ..+.++.+...++.++.... +...+++..++.|+|.|+.....|.+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 6899999999999999999999999999 77888888888888877754 44588889999999999999999999
Q ss_pred HHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHH
Q 008210 466 VSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSIL 545 (574)
Q Consensus 466 ~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (574)
.+|+-|++.||...+.......+|.. ++ .+.+...++. . .+|+..+.+..+.+++-.+.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~-~~-~~~~~~~~~~-~------------------~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGIL-LG-YCINYGTSKV-Y------------------AGWRIPLGLALIPAVILALG 225 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHH-HH-HHHhhhhccC-C------------------ccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888887765 66 3555554432 0 24887777777666665554
Q ss_pred HHHHhh
Q 008210 546 SIILNI 551 (574)
Q Consensus 546 ~~~~~~ 551 (574)
.+..+
T Consensus 226 -~~~~p 230 (513)
T KOG0254|consen 226 -MLFLP 230 (513)
T ss_pred -HHhCC
Confidence 44443
No 220
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.5e-06 Score=92.14 Aligned_cols=147 Identities=17% Similarity=0.261 Sum_probs=112.8
Q ss_pred hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHhhhccchhhhHH
Q 008210 385 DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM-IITYLLFASSIDGTLYAATALLGICYGVQFSIMI 463 (574)
Q Consensus 385 ~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~ 463 (574)
+-+...+++.++.+++.+.++.|.||+... ..+....++. ..+++.....+.+.+++..++.|++.++.+|...
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~ 156 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVV 156 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHH
Confidence 456788899999999999999999998744 3333333322 2232222334455778889999999999999999
Q ss_pred HHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHH
Q 008210 464 PTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGS 543 (574)
Q Consensus 464 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (574)
.+++..|+++++|..+|+.++...+|+. +|..++..+....+.. +..+|++.|++-+++.++..
T Consensus 157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i-~ggliA~g~~~~~~~~---------------~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 157 AILGNWYGKSERGLRMGIWYASASLGNI-FGGLIAYGVFKLNGSG---------------GLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHhhcChhhhhhhHHHHHHhcchhhH-HHHHHHHHhhhhcCCC---------------CcCCceeehhHHHHHHHHHH
Confidence 9999999999999999999999999998 8998888876643221 12479999999998888877
Q ss_pred HHHHHHhhh
Q 008210 544 ILSIILNIR 552 (574)
Q Consensus 544 ~~~~~~~~~ 552 (574)
+++++..+.
T Consensus 221 i~~f~~lp~ 229 (495)
T KOG2533|consen 221 IVVFFFLPD 229 (495)
T ss_pred heEEEEecC
Confidence 666655543
No 221
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.43 E-value=1.4e-05 Score=75.41 Aligned_cols=102 Identities=17% Similarity=0.117 Sum_probs=66.4
Q ss_pred hcchHHHHhhhCCCHHHHHHHHHHHHhh-hhccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH
Q 008210 32 PLYSHSLKSVLGFNQHQLTMLGVANDIG-ENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (574)
Q Consensus 32 ~~~~~~l~~~l~~s~~~~~~i~~~~~~~-~~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (574)
+.|..++-+.+++...|++-+..+..-. ++++.+.|-|+||-|||+....-++...+.| ++- .++.|-.++
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC------iTK--hSpqYkVLm 128 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC------ITK--HSPQYKVLM 128 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH------Hhh--cCCceEEEe
Confidence 3333334456677788888754444333 3569999999999999997655444444442 222 235688899
Q ss_pred HHHHHHHhhhHhhhhHHHHHHHhhCCCCcch
Q 008210 111 IALCVATNSSAWLGTAVLVTNMRNFPLSRGT 141 (574)
Q Consensus 111 ~~~~l~G~g~g~~~~~~~~~~~~~fp~~rg~ 141 (574)
++|++.|+..+..+.+--........++|+.
T Consensus 129 VGR~LGGiaTsLLFSaFEsWliaEHnekr~F 159 (454)
T KOG4332|consen 129 VGRVLGGIATSLLFSAFESWLIAEHNEKRGF 159 (454)
T ss_pred ehhhhhhHHHHHHHHHHHHHHHHHhhhccCC
Confidence 9999999999998876655433333334543
No 222
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.40 E-value=3.2e-06 Score=85.46 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=114.0
Q ss_pred hhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008210 25 AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (574)
Q Consensus 25 ~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 103 (574)
.|..-+...-...-.+++|++..|+..+.....+.... +++.|+|.||+|.|+++.++.++..+.++... ...
T Consensus 266 DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~---~~~--- 339 (438)
T COG2270 266 DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI---FLE--- 339 (438)
T ss_pred hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH---Hcc---
Confidence 34433333222334569999999999977766666654 99999999999999999999998888765522 221
Q ss_pred hhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHHhccC-ChhHHHHHHHHHHH
Q 008210 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVP 181 (574)
Q Consensus 104 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~-~~~~~~~~~~~~~~ 181 (574)
++ .-++++..+.|...|..+..+-.+..+..|+ |-++..|++....-.++.++|.+.+.+.+. ++.|.=+..-++..
T Consensus 340 ~~-~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll 418 (438)
T COG2270 340 GE-LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLL 418 (438)
T ss_pred cc-HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 12 3567788899999999999999999999995 779999999998888888888877765442 33343333333344
Q ss_pred HHHHHHHHhcc
Q 008210 182 AVCLVMMYFVR 192 (574)
Q Consensus 182 ~~~~~~~~~~~ 192 (574)
.++.+..+..+
T Consensus 419 ~iGl~~L~~v~ 429 (438)
T COG2270 419 LIGLLLLLRVK 429 (438)
T ss_pred HhhHhhEEeec
Confidence 44444444443
No 223
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.37 E-value=3.5e-06 Score=90.22 Aligned_cols=151 Identities=13% Similarity=0.137 Sum_probs=121.2
Q ss_pred cHHHHHHhhCC--chhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc-hHHH-HHH
Q 008210 373 NLAQIGIAQGV--HDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID-GTLY-AAT 448 (574)
Q Consensus 373 ~~~~~~~~~g~--~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~-~~~ 448 (574)
..+.+.++++. ++.++..++......+..|+.+.+.||+|.| .+.+.+.++..+|+++..+.+. +.++ ...
T Consensus 68 ~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R-----~v~i~G~~v~~~g~~lssF~~~i~~l~lt~g 142 (509)
T KOG2504|consen 68 LFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCR-----TVMIAGGLVAALGLLLSSFATSLWQLYLTFG 142 (509)
T ss_pred hHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCch-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455566665 3568888899889999999999999999999 7888899999999998887654 3444 456
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
++.|+|.|..+.....++...| .|+|+.+.|+...+..+|.+ +-|.+..++.+.. +|
T Consensus 143 vi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~-~~~~l~~~l~~~~---------------------G~ 199 (509)
T KOG2504|consen 143 VIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTV-VFPPLLKYLLSKY---------------------GW 199 (509)
T ss_pred HHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCccee-eHHHHHHHHHHHh---------------------Cc
Confidence 7778999998888788888777 59999999999999999999 5566888988884 58
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh
Q 008210 529 RITFFVLAGVCCVGSILSIILNI 551 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~ 551 (574)
+.++++.+.+.+-+++....+++
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999888887766665555544
No 224
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.34 E-value=8.5e-06 Score=82.22 Aligned_cols=118 Identities=11% Similarity=0.006 Sum_probs=89.1
Q ss_pred hhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhh
Q 008210 41 VLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNS 119 (574)
Q Consensus 41 ~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 119 (574)
.+|++.++.++..+.+..+..+ .++.+++.||+|+|+++.++.++..++.+++.. .+ +.+. ...-++.|++
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-----~~--~~~~-~~~~~l~g~~ 243 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-----TH--GYVA-MWFVLALGLF 243 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-----cC--CHHH-HHHHHHHHHH
Confidence 3799999999976666666655 999999999999999988888777776533211 11 1122 2344478999
Q ss_pred hHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhccC
Q 008210 120 SAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (574)
Q Consensus 120 ~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~ 167 (574)
.+..+|.......+.+|++.+.+.++.. ...+|+++.|++.+.+.+.
T Consensus 244 ~s~i~P~~~s~a~~~~~~~~~~asai~~-~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 244 NSIMFPTIFSLALNALGRHTSQGSGILC-LAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHH-HHHhcchHHHHHHHHHHHh
Confidence 9999998899999999988788888864 4558889999988877653
No 225
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.34 E-value=1.7e-06 Score=89.01 Aligned_cols=151 Identities=13% Similarity=0.180 Sum_probs=89.2
Q ss_pred hhchhHHHHHHHHHhhcccceeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHH
Q 008210 348 VVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTC 424 (574)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~ 424 (574)
+|++.+|.+...++......-....+++..+++ .|++ +.+.+.+...+...+..|+.|.++||+|.|| ..+..+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK---~Ll~~i 80 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKK---HLLWFI 80 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCS---HHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhH---HHHHHH
Confidence 356677776666655544444445566777765 7884 7788999999999999999999999999873 122222
Q ss_pred HHHHHHHHHHHHHhcCc---hHHHHHH----HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 425 TQVIMIITYLLFASSID---GTLYAAT----ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 425 ~~~~~~i~~~~~~~~~~---~~l~~~~----~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
..+....+........+ ...++.. ...++++....+..-+++.+. .++.+.-+|-.-..+.+|.+ ++..+
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~a-i~s~~ 157 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFA-IASLL 157 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHH-HHHHH
Confidence 22222222222211111 1122222 223344444444444444444 35667777777888888887 78889
Q ss_pred HHhhhhh
Q 008210 498 AGYIYDN 504 (574)
Q Consensus 498 ~g~l~~~ 504 (574)
.|.+.+.
T Consensus 158 ~G~L~~i 164 (412)
T PF01306_consen 158 AGILFNI 164 (412)
T ss_dssp HHHHHHH
T ss_pred hheeeee
Confidence 9999886
No 226
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.32 E-value=8.8e-06 Score=88.48 Aligned_cols=133 Identities=14% Similarity=0.019 Sum_probs=101.7
Q ss_pred hcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHH--Hhh---------
Q 008210 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLA--VSR--------- 99 (574)
Q Consensus 32 ~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~--~~~--------- 99 (574)
.....++++.|+++.++.+++...+-++..+ ..+..+..-|..|-+.+.+|.+++++|.+++.+= ..+
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 3445678899999999999988888888765 8889999999999999999999999998775432 000
Q ss_pred ----c-----------------------------cCChhHHHH-HHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHH
Q 008210 100 ----T-----------------------------VESLPYWLL-WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAG 144 (574)
Q Consensus 100 ----~-----------------------------~~~~~~~~l-~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~g 144 (574)
. .++..+|.+ +++.++.|+|....++....++-|... ++-.+..|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 111114544 557999999999999999999988886 57788889
Q ss_pred HHHhhhhhHHHHHHHHHHHh
Q 008210 145 ILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 145 i~~~~~~~g~~i~~~i~~~l 164 (574)
+..+..-+|++++-.++..+
T Consensus 277 i~~~~~~lGPaiGfllgS~~ 296 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFC 296 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHH
Confidence 99988878877764444433
No 227
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.28 E-value=5.8e-06 Score=86.84 Aligned_cols=102 Identities=16% Similarity=0.346 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh----cCchHHHHHHHHHhhhccchhhhHH
Q 008210 388 ILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS----SIDGTLYAATALLGICYGVQFSIMI 463 (574)
Q Consensus 388 ~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~~~l~g~~~g~~~~~~~ 463 (574)
..++++.+++++|.+..|+++||+||| ..+.++.++..++.+++.. .....+++...+.|+..|......+
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK-----~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRK-----NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcch-----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHH
Confidence 477889999999999999999999999 5566666666555555442 2234777889999999999999999
Q ss_pred HHHHhhcCccchhhhhhhhhhhhhhHHHHHhH
Q 008210 464 PTVSELFGLEHFGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 464 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 495 (574)
.+++|.-|.+.||....+..++..+|.. ++.
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~l-l~~ 169 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGIL-LGQ 169 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999988888777776 553
No 228
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.27 E-value=1.1e-05 Score=85.59 Aligned_cols=117 Identities=17% Similarity=0.189 Sum_probs=86.5
Q ss_pred hCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhh
Q 008210 42 LGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSS 120 (574)
Q Consensus 42 l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~ 120 (574)
++ +..+.+++.....++.++ .++.+++.||+|+|+++.++.+++.++.+.+.+. . .+.+.+++..++.|++.
T Consensus 253 ~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~g~~~ 325 (437)
T TIGR00792 253 LG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA-----G-SNLPLILVLIILAGFGQ 325 (437)
T ss_pred cC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----c-hhHHHHHHHHHHHHHHH
Confidence 44 455666654444555554 8999999999999999999988888876553321 1 24566677788889998
Q ss_pred HhhhhHHHHHHHhhCC--------CCcchHHHHHHhhhhhHHHHHHHHHHHhc
Q 008210 121 AWLGTAVLVTNMRNFP--------LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (574)
Q Consensus 121 g~~~~~~~~~~~~~fp--------~~rg~a~gi~~~~~~~g~~i~~~i~~~l~ 165 (574)
+..++....++.+..+ +++|.+.|+.+....+|..+++.+.+.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 326 NFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred HHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777777776543 35799999999888888888888877664
No 229
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.23 E-value=7.9e-06 Score=83.17 Aligned_cols=106 Identities=23% Similarity=0.179 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc----Cc----hHHHHHHHHHhhhccch
Q 008210 387 TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS----ID----GTLYAATALLGICYGVQ 458 (574)
Q Consensus 387 ~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~----~~----~~l~~~~~l~g~~~g~~ 458 (574)
+.......++.++|++..||+.||+||| .++...++++.++.++...+ ++ ..+.....++|+|.|+-
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK-----~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGD 161 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRK-----KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGD 161 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcch-----hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCC
Confidence 4566677889999999999999999999 67777777777776644421 12 25667789999999999
Q ss_pred hhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHH
Q 008210 459 FSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLA 498 (574)
Q Consensus 459 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~ 498 (574)
+|+..++++|..-.+.||.-.+.+.+.+..|-. .|..+.
T Consensus 162 YPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil-aG~ivt 200 (538)
T KOG0252|consen 162 YPLSATIMSESANKKTRGAFIAAVFAMQGFGIL-AGGIVA 200 (538)
T ss_pred CcchHHHhhhhhhhccccceeEEEEEecchhHh-hccHHH
Confidence 999999999999999999999999888877765 555333
No 230
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.22 E-value=5.2e-05 Score=79.10 Aligned_cols=144 Identities=17% Similarity=0.112 Sum_probs=99.9
Q ss_pred HHHHHHHHhhhccchhhcchHHHHhhhC-CCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHH
Q 008210 16 GAAVWVQIAAGNAYNFPLYSHSLKSVLG-FNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVL 93 (574)
Q Consensus 16 ~~~~l~~~~~g~~~~~~~~~~~l~~~l~-~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~ 93 (574)
+.+++++...+..|.|. +..-++.| .+.+..+.+-+...+.-+. -...+++..|+|.|+++.++.+...+=+.++
T Consensus 214 l~~~l~~~~~~~~~~f~---~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 214 LAAFLIGISHAAYYTFF---SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444443 33345555 6666666544444455554 7789999999999999999999888776553
Q ss_pred HHHHhhccCChhHH---HHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHh-hhhhHHHHHHHHHHHhccC
Q 008210 94 WLAVSRTVESLPYW---LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKG-YGGLSAAVFTEIYNMLLHN 167 (574)
Q Consensus 94 ~~~~~~~~~~~~~~---~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~-~~~~g~~i~~~i~~~l~~~ 167 (574)
... +++.+. ..++...++|+..|..+.++..++.+..| +.|+++.++..+ .+|+|..++..+++++.+.
T Consensus 291 a~~-----~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 291 AYF-----SDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred HHh-----cCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 322 112221 12334567999999999999999999999 579999999866 5789999999999888764
No 231
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.21 E-value=3e-05 Score=76.97 Aligned_cols=150 Identities=14% Similarity=0.073 Sum_probs=123.0
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHH
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAA 447 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 447 (574)
+-..++.+-++.|.+ .++.++++..++..+..++..++..|+|.. ..+.+++++..+|..+=...+...++..
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-----r~l~~~Llli~~G~~iR~~~~~~~L~~g 105 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-----RSLFLALLLIAAGILIRSLGGLPLLFLG 105 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-----HHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 344566677777874 678899999999999999999999999998 5677777888887766444455688889
Q ss_pred HHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCcc
Q 008210 448 TALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNC 527 (574)
Q Consensus 448 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (574)
..+.|.+.+......|..+.+.|| |+.+..+|++.+...+++. +++.+.-.+.++. ++
T Consensus 106 t~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aa-Laa~lavpla~~~--------------------~g 163 (395)
T COG2807 106 TLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAA-LAAALAVPLAQHS--------------------GG 163 (395)
T ss_pred HHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHH-HHhhhhhHHHHhh--------------------cc
Confidence 999999999999999999999997 8889999999999999988 8888888877774 36
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 008210 528 FRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~ 546 (574)
|+.++.+.+..+++++++.
T Consensus 164 W~~aL~~WAl~allAl~~W 182 (395)
T COG2807 164 WRGALGFWALLALLALLIW 182 (395)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9998888887777766543
No 232
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.20 E-value=9.3e-05 Score=75.91 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH----hcCchHHHHHHHHHhhhccchhhhH
Q 008210 387 TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA----SSIDGTLYAATALLGICYGVQFSIM 462 (574)
Q Consensus 387 ~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~~~l~g~~~g~~~~~~ 462 (574)
.++...+.++.+++|=-.-++ |+++.+++.+...+..+.+++-+ .++.+.+++..+..|+..|..+...
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~-------rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF-------RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee-------ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 356667777777777644332 23334555544444444333322 1234455566777799889999888
Q ss_pred HHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 463 IPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 463 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
...+.|..++++|-.++|....+-.+|-. ++. +.|...|.
T Consensus 357 F~~I~~~~~~~~REFslg~vsvsds~GI~-lAg-ll~l~le~ 396 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVSVSDSLGIL-LAG-LLGLPLEP 396 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhHHHH-HHH-HHHHHHHH
Confidence 88889999999999999999998888876 555 55554444
No 233
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.19 E-value=5.7e-05 Score=72.09 Aligned_cols=162 Identities=15% Similarity=0.142 Sum_probs=109.8
Q ss_pred cccCcHHHHHHHHHHHHhhhccchhhcchHHHHhhhCCCHHHHHHH-HHHHHhhhhccccchhccccCCChHHHHHHHHH
Q 008210 7 GSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASNKFPPWLVLFIGSLA 85 (574)
Q Consensus 7 ~~~~~w~~~~~~~l~~~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i-~~~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~ 85 (574)
....-|+.+..+++...+.--.+..+ ..-++++||+|..+.+.+ +....+....+|+.|.+.||+|++.....+..+
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg--~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLG--PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhh--HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 33455888887777654332222222 224689999999999985 666677777799999999999999876665544
Q ss_pred H-HHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-CcchHHHHHHhhhhhHHHHHHHHHHH
Q 008210 86 C-FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNM 163 (574)
Q Consensus 86 ~-~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-~rg~a~gi~~~~~~~g~~i~~~i~~~ 163 (574)
. ..+..++.+ +++.=++...+.|++.+..-..-...+....|+ +.|++.|.......+|-++.|.+.+.
T Consensus 340 ~tl~~H~~l~F---------t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 340 LTLLGHSGLFF---------TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHHHHhhhHHh---------hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 3 333322111 123335667778888877644455667788895 78999999999999999898888887
Q ss_pred hccCC---hhHHHHHHHHH
Q 008210 164 LLHNS---SSKLLLVLAVG 179 (574)
Q Consensus 164 l~~~~---~~~~~~~~~~~ 179 (574)
+.+.+ .|.-.+++.+.
T Consensus 411 i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 411 IADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred eecCCCchhhHHHHHHHHH
Confidence 77653 34434444443
No 234
>PRK09848 glucuronide transporter; Provisional
Probab=98.12 E-value=3.6e-05 Score=82.06 Aligned_cols=122 Identities=16% Similarity=0.098 Sum_probs=87.9
Q ss_pred HHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 008210 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (574)
Q Consensus 38 l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (574)
+++.+|.+.....+......++.+ ..++.+++.||+|+|+++.+|.+++.++++++.+ ....+++.+++..++.
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~-----~~~~~~~~~~~~~~l~ 329 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW-----VSVWSLPVALVALAIA 329 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-----cCchhHHHHHHHHHHH
Confidence 345567665544444444344444 4899999999999999999999988888655432 2223567777778889
Q ss_pred HhhhHhhhhHHHHHHHhhCCC--------CcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 117 TNSSAWLGTAVLVTNMRNFPL--------SRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 117 G~g~g~~~~~~~~~~~~~fp~--------~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
|+|.+...+....+..+..|+ ++|...|+.+....+|..+++.+.+.+
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888777777766542 358888998888888888887776654
No 235
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.01 E-value=3.5e-05 Score=82.77 Aligned_cols=127 Identities=13% Similarity=0.076 Sum_probs=83.5
Q ss_pred eeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhh----hccccCchhhHHHHHHHHHHHHHHHHhcC--
Q 008210 370 VLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHF----VRKTIPRTIWMTCTQVIMIITYLLFASSI-- 440 (574)
Q Consensus 370 ~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~----g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-- 440 (574)
+..+++.|+++ .|++ ..+.+..+.-+.+++.-|+.|+++||. ||| | .++..+.+..++++.++....
T Consensus 25 ~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grr---r-p~il~g~i~~~i~~~llf~~p~~ 100 (473)
T PRK10429 25 VYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKF---K-PWILIGTLANSVVLFLLFSAHLF 100 (473)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCc---c-hhHhhhhHHHHHHHHHHHcCCCC
Confidence 34456666666 5885 456778888899999999999999954 665 2 345555566666655443221
Q ss_pred -ch----HHHHHHHHHhhhccchhhhHHHHHHhhc-CccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 441 -DG----TLYAATALLGICYGVQFSIMIPTVSELF-GLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 441 -~~----~l~~~~~l~g~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
.. .+++...+.++++........+...|+. ++++|....+....+..+++. +.+.+...+
T Consensus 101 ~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~-~~~~~~~~~ 166 (473)
T PRK10429 101 EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGF-VTAGFTLPF 166 (473)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 11 2233444556677666666778888887 578899988887777777766 444444433
No 236
>PRK09669 putative symporter YagG; Provisional
Probab=98.00 E-value=3.4e-05 Score=82.09 Aligned_cols=161 Identities=9% Similarity=-0.010 Sum_probs=94.8
Q ss_pred eccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhcc-ccCchhhHHHHHHHHHHHHHHHH-hcC---c-
Q 008210 371 LNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRK-TIPRTIWMTCTQVIMIITYLLFA-SSI---D- 441 (574)
Q Consensus 371 ~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r-~~~~~~~~~~~~~~~~i~~~~~~-~~~---~- 441 (574)
..+++.++.+ .|++ ..+.+.++..+.+.+.-|+.|+++||...| ..+| .++..+.+..+++..+.. .++ .
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrr-p~il~~~~~~~i~~~l~f~~p~~~~~~ 107 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFR-PYLLWFAIPFGVVCLLTFYTPDFGATG 107 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcc-hhHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 3445555544 7885 567788889999999999999999995433 1112 344444444444444332 221 1
Q ss_pred --hHHHHHHHHHhhhccchhhhHHHHHHhhc-CccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCC
Q 008210 442 --GTLYAATALLGICYGVQFSIMIPTVSELF-GLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSN 518 (574)
Q Consensus 442 --~~l~~~~~l~g~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~ 518 (574)
...++...+.+.++........++.+|.. ++++|+...+.-.....+|+. +++.+...+....+....
T Consensus 108 ~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~-i~~~~~~pl~~~~~~~~~-------- 178 (444)
T PRK09669 108 KIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL-IVSVIALPLVDILGKGDE-------- 178 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCch--------
Confidence 12333445556666666666667888887 457788888887777777776 565544444433211000
Q ss_pred cccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 519 VVSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
..+|...+.+.+++++++.++++
T Consensus 179 ------~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 179 ------QKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred ------hhhHHHHHHHHHHHHHHHHHHHh
Confidence 02466666666666655554443
No 237
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.99 E-value=1.8e-07 Score=99.68 Aligned_cols=135 Identities=24% Similarity=0.276 Sum_probs=102.7
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC----chHHHHHHHHHhhhccchhhh
Q 008210 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI----DGTLYAATALLGICYGVQFSI 461 (574)
Q Consensus 386 ~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~~~~l~g~~~g~~~~~ 461 (574)
..+..+...++..+|.++.|.++||+||| ..+.++.++..++.++....+ ...+.+...+.|++.|+..+.
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRK-----PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHhhhccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34567788899999999999999999999 566667777777777766543 446777889999999999999
Q ss_pred HHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHH
Q 008210 462 MIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCV 541 (574)
Q Consensus 462 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (574)
.+.++.|..|+++||....+......+|.. ++..+ ++....... ...|+..+++..+..++
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~-~~~~~-~~~~~~~~~-----------------~~~Wr~~~~~~~~~~l~ 183 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGIL-LASLI-GYIVSYYSD-----------------NWGWRILLIFGAIPSLL 183 (451)
T ss_pred cccccccccccccccccccccccccccccc-ccccc-ccccccccc-----------------ccccccccccccccccc
Confidence 999999999999999999999998888876 66633 333322100 02488877776666555
Q ss_pred HHH
Q 008210 542 GSI 544 (574)
Q Consensus 542 ~~~ 544 (574)
..+
T Consensus 184 ~~~ 186 (451)
T PF00083_consen 184 VLL 186 (451)
T ss_pred ccc
Confidence 443
No 238
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.97 E-value=0.00017 Score=69.55 Aligned_cols=129 Identities=16% Similarity=0.088 Sum_probs=82.7
Q ss_pred eeeeccHHHHHHhhCCchh--hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh--cC---
Q 008210 368 VTVLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS--SI--- 440 (574)
Q Consensus 368 ~~~~~~~~~~~~~~g~~~~--~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~--~~--- 440 (574)
..+..+.|++-+.+|+++. ..+-....++..+| +..|.+.||+|.+ .++.++.+...+|..+++. .+
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~~~~i~ 92 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAVSGRIP 92 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 3444567777777888654 34555566666665 7789999999988 7788888888898887663 11
Q ss_pred --ch-HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 441 --DG-TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 441 --~~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
+. .+.+...+.|.+.............+.|| ++||.+.|+.-...++++.++.. +...+.+.
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~-i~~~~f~~ 157 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQ-IYSAFFGD 157 (250)
T ss_pred ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHH-HHHHHcCC
Confidence 11 22222233333322222333345567887 78999999999988888885544 44444433
No 239
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.94 E-value=0.00011 Score=77.79 Aligned_cols=121 Identities=17% Similarity=0.132 Sum_probs=87.7
Q ss_pred HHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHH
Q 008210 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (574)
Q Consensus 38 l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (574)
.+..++.+ ...+++.....+..+ ..++.++++||+|+|+++..+.++..++.+++++.. . ++.+.+++..++.
T Consensus 252 ~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~i~~~l~ 325 (428)
T PF13347_consen 252 FTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG--P---GSPWLVLILFILA 325 (428)
T ss_pred HHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH--h---hhHHHHHHHHHHh
Confidence 34445544 455665555555554 489999999999999999999999999977655442 1 2578888999999
Q ss_pred HhhhHhhhhHHHHHHHhhCC--------CCcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 117 TNSSAWLGTAVLVTNMRNFP--------LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 117 G~g~g~~~~~~~~~~~~~fp--------~~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
|++.+..+.....+++|..+ ++.|...|+......+|..+++.+...+
T Consensus 326 gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 326 GIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 99999998888888887764 1246777777666666666666655543
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.86 E-value=0.00044 Score=69.85 Aligned_cols=126 Identities=16% Similarity=0.101 Sum_probs=102.5
Q ss_pred cHHHHHHhhCC--chhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc---Cch-HHHH
Q 008210 373 NLAQIGIAQGV--HDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS---IDG-TLYA 446 (574)
Q Consensus 373 ~~~~~~~~~g~--~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~---~~~-~l~~ 446 (574)
.+|.+-+.+.. .++++....+..+-.+..+-.|++.+|+|+| .-++++..+++++..+++.. ..+ ....
T Consensus 35 Lip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 35 LIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLGLLLYAVGAALFWPAASSKSYGFFLV 109 (422)
T ss_pred hHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 35555555565 4778888888999999999999999999999 77888999999999887632 223 3344
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
...+.|.|.|..-....++++.+.+++....-+++....+.+|.. ++|.+.+.+.++
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~-~gp~~g~~lils 166 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAI-LGPLLGSSLILS 166 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHH-HHHHHHHHHHHh
Confidence 556777777777777788999999998889999999999999998 999999999884
No 241
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.83 E-value=0.00039 Score=70.70 Aligned_cols=126 Identities=13% Similarity=0.008 Sum_probs=84.9
Q ss_pred HHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhh-ccccCchhhHHHHHHHHHHHHHHHHh-----cC-------ch
Q 008210 378 GIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFV-RKTIPRTIWMTCTQVIMIITYLLFAS-----SI-------DG 442 (574)
Q Consensus 378 ~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g-~r~~~~~~~~~~~~~~~~i~~~~~~~-----~~-------~~ 442 (574)
..|++++ -.+.++++..+. ...|+..|..+|+.+ ...++|...+..+......+..+..+ .. +.
T Consensus 7 IvEL~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 3455553 223344444333 346999999999877 22233444555565555555444321 12 11
Q ss_pred -----HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 443 -----TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 443 -----~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
...+.+.++|++.+..-....+.++|..|+|+|+++.+++++...+|.. ++..+.|.+.|.+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~i-v~ai~~g~lL~~~ 152 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGII-VSAIVFGRLLDPF 152 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHH-HHHHHHHHHcccc
Confidence 2334566778887777777889999999999999999999998888876 8999999998874
No 242
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.82 E-value=0.00047 Score=67.97 Aligned_cols=126 Identities=24% Similarity=0.201 Sum_probs=90.0
Q ss_pred cchHHHHhhhCCCH--HHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHH
Q 008210 33 LYSHSLKSVLGFNQ--HQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (574)
Q Consensus 33 ~~~~~l~~~l~~s~--~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 109 (574)
...+.+..+++.+. .+.++......+.... .++.|.+.||+|||+.+..+......+.++..+. .+.+.+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 97 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA-----PNVGLALL 97 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC-----ccchHHHH
Confidence 34455556666555 4677765555566554 6999999999999988888877645553332222 11247888
Q ss_pred HHHHHHHHhhhHhhhhHHHHHHHhhCCC--CcchHHHHHHh-hhhhHHHHHHHHHHH
Q 008210 110 WIALCVATNSSAWLGTAVLVTNMRNFPL--SRGTVAGILKG-YGGLSAAVFTEIYNM 163 (574)
Q Consensus 110 ~~~~~l~G~g~g~~~~~~~~~~~~~fp~--~rg~a~gi~~~-~~~~g~~i~~~i~~~ 163 (574)
++.|++.|++.+...+....++.+++|+ +|+...+.... ....|..+++.+...
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGL 154 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998888999999999996 78888888877 466666666644443
No 243
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.78 E-value=0.00046 Score=76.24 Aligned_cols=154 Identities=14% Similarity=0.209 Sum_probs=107.7
Q ss_pred HHHHHH-hhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhh-hhccccCchhhHHHHHHHHHHHHHHHHhcC------c--
Q 008210 374 LAQIGI-AQGVH--DTTILLSLFSFCNFVGRLGGGVVSEH-FVRKTIPRTIWMTCTQVIMIITYLLFASSI------D-- 441 (574)
Q Consensus 374 ~~~~~~-~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~------~-- 441 (574)
+..|++ .+|++ .+......+....-+..+++|++.|+ +|++ +.+..+.++..+|..++.... .
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~~~~~~~~ 84 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIPSSGHPLH 84 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCcccccchH
Confidence 334433 35664 34445556666666778899999996 5666 566677777888887765421 1
Q ss_pred -hHHHHHHHHHhhhccchhhhHHHHHHhhcCcc---chhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccC
Q 008210 442 -GTLYAATALLGICYGVQFSIMIPTVSELFGLE---HFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTS 517 (574)
Q Consensus 442 -~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~ 517 (574)
...++...+..+|.|+.-++..+...|.++++ .+-..+.+.+.+.++|++ +++.+.+++.+..
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSl-is~~i~~~l~~~~------------ 151 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSL-ISTIITPILRGDV------------ 151 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh------------
Confidence 12455667777888998899999999999754 367788888899999998 8888988886542
Q ss_pred CcccccC-CccchhHHHHHHHHHHHHHHHHHH
Q 008210 518 NVVSCLG-PNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 518 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
.|.+ ..+|..+|.+.+++.++++++...
T Consensus 152 ---~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 152 ---GCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred ---cccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 1222 236888898888888877665543
No 244
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.74 E-value=0.00042 Score=74.19 Aligned_cols=166 Identities=17% Similarity=0.141 Sum_probs=97.8
Q ss_pred HHHHHHHHhhcccceeeeccHHHHHH-hhCCch--hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHH-
Q 008210 354 WLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVHD--TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIM- 429 (574)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~- 429 (574)
......++..... ......++++++ ++|++. .+.+.+...+...+ .+++|.++||++....+|.+.+.++.++.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~ 106 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGS 106 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHH
Confidence 3444444444333 222334445555 578864 34566666666666 56699999999621111224555554444
Q ss_pred HHHHHHHHhcCc-hHHH-HHHHHHhhhccchhhhHHHHHHhhcCccchhhhh---hhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 430 IITYLLFASSID-GTLY-AATALLGICYGVQFSIMIPTVSELFGLEHFGLIS---NFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 430 ~i~~~~~~~~~~-~~l~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~---g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
.+++..+...+. .... +..++.+++.+..-...-.+..|..+ |+++... +..+....+|.. +++.+.|.+.+.
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~-vg~~l~G~l~~~ 184 (468)
T TIGR00788 107 AILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGL-ISSLLGGPLLDK 184 (468)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 233333332222 2222 35667777777777777888999887 5544433 333333447776 899999999887
Q ss_pred hhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHH
Q 008210 505 EAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSI 544 (574)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (574)
. +|+..|++.++..++..+
T Consensus 185 ~---------------------~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 185 T---------------------LTRILFLITAALLLLQLF 203 (468)
T ss_pred c---------------------CcchHHHHHHHHHHHHHH
Confidence 3 588889888777766643
No 245
>PRK11462 putative transporter; Provisional
Probab=97.70 E-value=0.00039 Score=74.30 Aligned_cols=131 Identities=8% Similarity=-0.054 Sum_probs=84.8
Q ss_pred ccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhcc-ccCchhhHHHHHHHHHHHHHHHH-hcC--ch--
Q 008210 372 NNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRK-TIPRTIWMTCTQVIMIITYLLFA-SSI--DG-- 442 (574)
Q Consensus 372 ~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r-~~~~~~~~~~~~~~~~i~~~~~~-~~~--~~-- 442 (574)
.++..++.+ .|++ ..+.+..+.-+.+++.-|+.|.++||...| ...|++ +..+.+...+++.++. .++ ..
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~-il~g~i~~~i~~~llf~~p~~s~~~~ 108 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPW-VLFGALPFGIVCVLAYSTPDLSMNGK 108 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchh-HhHHHHHHHHHHHHHHhCCCCCcchH
Confidence 455555555 6885 456777788899999999999999975433 111334 4445455555555544 221 11
Q ss_pred --HHHHHHHHHhhhccchhhhHHHHHHhhcC-ccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 443 --TLYAATALLGICYGVQFSIMIPTVSELFG-LEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 443 --~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
..++...+..+++........++.+|+.+ +++|++..+.-..+..+|+. +++.+...+.+.
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~-~~~~~~~plv~~ 172 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM-LSTVLMMPLVNL 172 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 23334455566777666666678888765 57899999998888888876 666555554443
No 246
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.69 E-value=0.012 Score=65.33 Aligned_cols=153 Identities=13% Similarity=0.099 Sum_probs=104.6
Q ss_pred cchHHHHhhhCCCHHHHHH-HHHHHHhhhhccccchhccc-cCCChHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHH
Q 008210 33 LYSHSLKSVLGFNQHQLTM-LGVANDIGENVGLLPGLASN-KFPPWLVLFIGSLACFFGYGVLWLAVSRTVES---LPYW 107 (574)
Q Consensus 33 ~~~~~l~~~l~~s~~~~~~-i~~~~~~~~~~~~~~G~l~d-r~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~---~~~~ 107 (574)
++..++.+.+|++.++... +..+..+..+...+.|.++| ++|++++++++.++..+|..++.+. +.... ....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~--a~~~~~~~~~~~ 86 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG--AIPSSGHPLHDL 86 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--cCcccccchHHH
Confidence 3345567789999888777 67777777788999999999 5999999999999999997665432 21110 0122
Q ss_pred HHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CC---cchHHHHHHhhhhhHHHHHHHHHHHhccC-------ChhHHHHHH
Q 008210 108 LLWIALCVATNSSAWLGTAVLVTNMRNFP-LS---RGTVAGILKGYGGLSAAVFTEIYNMLLHN-------SSSKLLLVL 176 (574)
Q Consensus 108 ~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~---rg~a~gi~~~~~~~g~~i~~~i~~~l~~~-------~~~~~~~~~ 176 (574)
..+++-.+..+|.|..-+.......+.|+ ++ |-....+...+.++|+.+.+++...+-.. ..|...+.+
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i 166 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGV 166 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Confidence 34556677788888888888888999995 32 55566777777788888887777665321 135555544
Q ss_pred HHHHHHHHHHH
Q 008210 177 AVGVPAVCLVM 187 (574)
Q Consensus 177 ~~~~~~~~~~~ 187 (574)
..+..+++++.
T Consensus 167 ~~i~m~ia~lv 177 (654)
T TIGR00926 167 PAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHH
Confidence 44444444433
No 247
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.62 E-value=0.00016 Score=71.77 Aligned_cols=121 Identities=14% Similarity=0.073 Sum_probs=80.7
Q ss_pred cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcch
Q 008210 63 GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGT 141 (574)
Q Consensus 63 ~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~ 141 (574)
.++.+++.||+|||+++....+++++-.++...+.+ .+.-...++.+|++.-. .+.+.+.+.-+.|| +-|++
T Consensus 398 lLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~---rn~~tvllf~arafisg----~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 398 LLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT---RNAYTVLLFTARAFISG----AFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC---cchhHHHHHHHHHHHhc----hheEEEEecCcccchhhhhc
Confidence 778999999999999999999998888766544432 22112334557776532 34456678889999 57999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcc
Q 008210 142 VAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVR 192 (574)
Q Consensus 142 a~gi~~~~~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (574)
..|...+..-+|+++.|.+. ...+.....-+++.+. ..+++.++..+++
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~-~~ilagIavcffP 519 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGA-LFILAGIAVCFFP 519 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHH-HHHHHHHHheeee
Confidence 99999999999998888777 3333222222333332 3334444444444
No 248
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.60 E-value=0.0024 Score=64.02 Aligned_cols=151 Identities=18% Similarity=0.069 Sum_probs=92.6
Q ss_pred HHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhh
Q 008210 377 IGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGIC 454 (574)
Q Consensus 377 ~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~ 454 (574)
++++.|++ +.+.+.....+...+..++.|.+.||+||| ...++..++.+++.+.--.++...+++..++-|++
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIA 134 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 34567775 445566666777778888999999999999 44555556666665544445556888899999999
Q ss_pred ccchhhhHHHHHH-h----hcCccchhhhhhhhh-hhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccc
Q 008210 455 YGVQFSIMIPTVS-E----LFGLEHFGLISNFLA-LGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCF 528 (574)
Q Consensus 455 ~g~~~~~~~~~~~-~----~~~~~~~g~~~g~~~-~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (574)
....++..-+.+. | -+|.+..+...+... ..+.+-.. .+..++..+.|..+ .+.
T Consensus 135 TSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI-~aGv~a~~l~~~~~-------------------~g~ 194 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAI-GAGVVANVLADWFG-------------------FGP 194 (354)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHH-HHhHHHHHHHHHhC-------------------CCC
Confidence 8888776665443 2 244444555555444 22333332 33334444444421 124
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 529 RITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
..+|.....+..++.++......|
T Consensus 195 vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred cchHHHHHHHHHHHHHHHHhcccc
Confidence 667887777777766654433333
No 249
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.56 E-value=0.0014 Score=58.38 Aligned_cols=98 Identities=17% Similarity=-0.012 Sum_probs=76.5
Q ss_pred hhhccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-C
Q 008210 59 GENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-L 137 (574)
Q Consensus 59 ~~~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~ 137 (574)
..+.+++...+.+++|+|+.+.+|.+...+-... -.. ++.+.++...++.|+|.+..+.+.-.++.++.. +
T Consensus 50 ~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~------~~~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS------FFY--PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH------HHh--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 3344677788999999999999998877644222 111 345788999999999999999999999998886 5
Q ss_pred CcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 138 SRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 138 ~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
+|++-.++.++....+.+++..+...+
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999888877776655444
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.55 E-value=0.00019 Score=74.76 Aligned_cols=136 Identities=15% Similarity=0.108 Sum_probs=101.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH-hcCchHHHHHHHHHhhhccchhhhHHHHHH
Q 008210 389 LLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA-SSIDGTLYAATALLGICYGVQFSIMIPTVS 467 (574)
Q Consensus 389 ~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~ 467 (574)
.......+.++.-+..+++.+|+|+- .++..++....+=++.++ ..+++.....=.+.|+..+..|.++.++++
T Consensus 411 ~~a~~~~gEI~~~ffs~klI~kiGHv-----~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s 485 (618)
T KOG3762|consen 411 VSALCHAGEILFYFFSFKLIEKIGHV-----NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYAS 485 (618)
T ss_pred hhhhhccchHHHHHHHHHHHHHhccc-----ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556667778888999999988 456666666666555555 456677777889999999999999999999
Q ss_pred hhcCccchhhhhhhhh-hhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHH
Q 008210 468 ELFGLEHFGLISNFLA-LGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 468 ~~~~~~~~g~~~g~~~-~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (574)
...|++.+.++.|+.. ...++|-. +|..++|.+.+.. +-+..|.++++.+++.++..
T Consensus 486 ~vaPp~l~at~Q~l~~g~f~GlG~g-~GslIGG~~v~~f---------------------g~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 486 HVAPPGLRATAQGLLQGIFHGLGKG-LGSLIGGFVVERF---------------------GARTTFRIFGIACLVTLALF 543 (618)
T ss_pred hhCCCcchHHHHHHHHHHhcccCcc-hhhhhhhhhheee---------------------hhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999965 45566666 7888888888874 34777888887777665554
Q ss_pred HHHhh
Q 008210 547 IILNI 551 (574)
Q Consensus 547 ~~~~~ 551 (574)
..+.+
T Consensus 544 ~~iq~ 548 (618)
T KOG3762|consen 544 ISIQL 548 (618)
T ss_pred HHhhh
Confidence 44443
No 251
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.49 E-value=0.2 Score=53.23 Aligned_cols=130 Identities=6% Similarity=-0.070 Sum_probs=84.3
Q ss_pred hHHHHhhhCC-----CHHHHHHHHHHHHhhh-hc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCC--h-
Q 008210 35 SHSLKSVLGF-----NQHQLTMLGVANDIGE-NV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES--L- 104 (574)
Q Consensus 35 ~~~l~~~l~~-----s~~~~~~i~~~~~~~~-~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~--~- 104 (574)
..+++|.+.. ..+.+.|+-+...+.+ +. .++.+++++|++|++++-+-...+..-++++++.+-..... +
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~ 105 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT 105 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence 4567888766 3357888766665554 33 89999999999999998876666665554544432211100 0
Q ss_pred ---------------------hHHHHHHHHHHHHhhhHhhhh-HHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHH
Q 008210 105 ---------------------PYWLLWIALCVATNSSAWLGT-AVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIY 161 (574)
Q Consensus 105 ---------------------~~~~l~~~~~l~G~g~g~~~~-~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~ 161 (574)
+.|...++.+..-+=...... .-...++|.+. ++-.|-.++...+.++|.++++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444444443343333 55667888886 5667788999999999998888887
Q ss_pred HHh
Q 008210 162 NML 164 (574)
Q Consensus 162 ~~l 164 (574)
..+
T Consensus 186 ~~~ 188 (472)
T TIGR00769 186 KYF 188 (472)
T ss_pred HHH
Confidence 765
No 252
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.49 E-value=0.00099 Score=69.66 Aligned_cols=162 Identities=11% Similarity=0.037 Sum_probs=104.1
Q ss_pred eccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhcc-ccCchhhHHHHHHHHHHHHHHHHhcC----c-
Q 008210 371 LNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRK-TIPRTIWMTCTQVIMIITYLLFASSI----D- 441 (574)
Q Consensus 371 ~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r-~~~~~~~~~~~~~~~~i~~~~~~~~~----~- 441 (574)
..++..++.+ .|++ .++.+..+.-+.+++.-|+.|.++||..+| -..|++++..+.....+..+++..++ .
T Consensus 32 ~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k 111 (467)
T COG2211 32 VLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGK 111 (467)
T ss_pred HHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcc
Confidence 4466666766 6886 456777788899999999999999987655 22244555444444444444444332 1
Q ss_pred -hHHHHHHHHHhhhccchhhhHHHHHHhhcC-ccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCc
Q 008210 442 -GTLYAATALLGICYGVQFSIMIPTVSELFG-LEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNV 519 (574)
Q Consensus 442 -~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~ 519 (574)
...++...+.+++|........++.+|+.. +++|.+..+.-..+..+|++ +...+.+.+....+..+.
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~-l~~~~~~plv~~~g~~~~--------- 181 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGL-LVAVLFPPLVKLFGGGDK--------- 181 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCcc---------
Confidence 145566788888888877767777777753 47788888888888888877 455566666655432210
Q ss_pred ccccCCccchhHHHHHHHHHHHHHHHHH
Q 008210 520 VSCLGPNCFRITFFVLAGVCCVGSILSI 547 (574)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (574)
..+|..+..+.+++.++..+.++
T Consensus 182 -----~~g~~~~~~~~~vi~~i~~l~~~ 204 (467)
T COG2211 182 -----ALGYQGTALVLGVIGVILLLFCF 204 (467)
T ss_pred -----hhhHHHHHHHHHHHHHHHHHHHH
Confidence 02466666666665555554444
No 253
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.44 E-value=0.0081 Score=63.34 Aligned_cols=111 Identities=12% Similarity=0.142 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH-h----------cCchHHHHHHHHHhhhc
Q 008210 387 TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA-S----------SIDGTLYAATALLGICY 455 (574)
Q Consensus 387 ~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~-~----------~~~~~l~~~~~l~g~~~ 455 (574)
.....++++++.+||.+..+.. ...+| ....+...+.=++. +.++++. . .+.+..++...+.|+..
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~-~~~l~i~s~~R~iF-IPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDED-SRWLPILSFLRVLF-IPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCC-ccchHHHHHHHHHH-HHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 3466789999999999765431 11111 00111111111222 2222222 1 12334566788888888
Q ss_pred cchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 456 GVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 456 g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
|-.......+..+..+++++..+-.+...+-.+|-. .|. +.+++.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~-~Gs-~l~~~~ 431 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLA-LGA-VLSFLF 431 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHH
Confidence 877666667777778878887777777776666665 566 444443
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.43 E-value=0.0017 Score=68.74 Aligned_cols=135 Identities=14% Similarity=0.139 Sum_probs=96.2
Q ss_pred HHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhh--hccchhhhHHHHHHhhc
Q 008210 393 FSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGI--CYGVQFSIMIPTVSELF 470 (574)
Q Consensus 393 ~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~--~~g~~~~~~~~~~~~~~ 470 (574)
.++...+..+..|.++||+||| ..+....+...+.-.+..+.. ++.++ +.++ +.+..++...+++++..
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk-----~~L~~~~~~~~l~~~~~~~~~-~~~~~---~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRK-----VVLLLPLFGTILPALCLLFQG-YWFFL---LLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhh-----hhHHHHHHHHHHhHHHHHHHH-HHHhh---hcccccchhhhhhhhhhheeecc
Confidence 3677788899999999999999 444443333333333333222 22222 4443 34455677788999999
Q ss_pred CccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHh
Q 008210 471 GLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILN 550 (574)
Q Consensus 471 ~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (574)
..+.|...+|+++.....+.. ++|.+.+.+.+.. ++...|.+..+..+++.+......
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~-~~p~~~~~~~~~~---------------------~~a~~f~ia~~~~~~~~~y~~~~l 199 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLV-IGPALGGYLVKFL---------------------GIALVFLIAAASGILSLLYMLLFL 199 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHhc---------------------CchHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999998888888 8999999988873 578888888888888877776666
Q ss_pred hhhhhhHH
Q 008210 551 IRIRPVYQ 558 (574)
Q Consensus 551 ~~~~~~~~ 558 (574)
+|...+.+
T Consensus 200 ~Esl~~~~ 207 (463)
T KOG2816|consen 200 PESLQEKE 207 (463)
T ss_pred ccccCccc
Confidence 66544333
No 255
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.35 E-value=0.0037 Score=65.63 Aligned_cols=189 Identities=13% Similarity=0.012 Sum_probs=117.3
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHh--hCC--chhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIA--QGV--HDTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQV 427 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~--~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 427 (574)
..|+..+..++...-...+....-+|.++ .+- +..++..+...++.+++.+..|+=+.|.++-+ +-+.++.+
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~i 110 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFL 110 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHH
Confidence 34555555555433333333333345555 333 34578888999999999999999999887522 35666777
Q ss_pred HHHHHHHHH-Hh---cC--chHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 428 IMIITYLLF-AS---SI--DGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 428 ~~~i~~~~~-~~---~~--~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
+..+|.++. +. ++ .+.+.++.++.|+|.|.... .=.++++.--.++|.+++...+.+..+|.. +||.+-..+
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~i-lGp~~q~~f 188 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGII-LGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHH-HhHHHHHHH
Confidence 888877765 32 22 23666788899988776543 446777766678888888887776677765 777443333
Q ss_pred hhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 502 YDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
..- ++++. +-.++ ..-.-|+.+-|++++++++.+++..+..+|.+
T Consensus 189 ~~L-g~~G~----~i~~~---~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 189 TPL-GEKGF----MILPG---LIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred hhh-cCCce----EEcCc---ceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 221 11100 00000 11134788889999988888877766655543
No 256
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.33 E-value=0.00061 Score=53.40 Aligned_cols=70 Identities=20% Similarity=0.194 Sum_probs=61.4
Q ss_pred hhc-cchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHH
Q 008210 25 AGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLW 94 (574)
Q Consensus 25 ~g~-~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~ 94 (574)
.|+ .+.|....|.+++|.++|.++.+|+.+.+.+|+++ .+...++.+|..+++.+..+.+...+.++.+.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 355 78899999999999999999999999999999988 88889999998888999999888888866643
No 257
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.28 E-value=0.003 Score=56.23 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHH
Q 008210 388 ILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVS 467 (574)
Q Consensus 388 ~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~ 467 (574)
.-.++......++.++.+.+.+++|.| +.+.++.+...+-......++.+.++...++.|++.+..|.....++.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHH
Confidence 455566667777788899999999999 777777666665554444556678889999999999999999999999
Q ss_pred hhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 468 ELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 468 ~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
+...++++++..|+.......+.. +|..+.-.+.
T Consensus 116 ~~s~~~~~~~~~~ifw~i~~~s~i-~G~~~~~~~~ 149 (156)
T PF05978_consen 116 SYSTEETIGRNTGIFWAIFQSSLI-FGNLFLFFIF 149 (156)
T ss_pred HcCCHHHHhhHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999998888888776 7775544443
No 258
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.24 E-value=0.0021 Score=63.46 Aligned_cols=130 Identities=13% Similarity=-0.046 Sum_probs=79.2
Q ss_pred hhhcchHHHH-hhhCCCHHHHHH-HHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhH
Q 008210 30 NFPLYSHSLK-SVLGFNQHQLTM-LGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (574)
Q Consensus 30 ~~~~~~~~l~-~~l~~s~~~~~~-i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 106 (574)
.-+...|++. .+.+++..|+.- +.=.-.-.+++ -.|.=.+.|..--|+++++-.+....-+.++.+. ++.
T Consensus 23 seP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g-------~sV 95 (433)
T KOG3810|consen 23 SEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG-------PSV 95 (433)
T ss_pred CCCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc-------CCc
Confidence 3344455554 456788877664 21111111122 3344457898888998887666555555442221 356
Q ss_pred HHHHHHHHHHHhhhHhhhhHHHHHHHhhC-CCCcchHHHHHHhhhhhHHHHHHHHHHHhccC
Q 008210 107 WLLWIALCVATNSSAWLGTAVLVTNMRNF-PLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (574)
Q Consensus 107 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~f-p~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~~ 167 (574)
+.+-+.-+..|...+.. .+-..++-.-. |+++.+++|..-+..-.|-..+..+.+.+...
T Consensus 96 ~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~ 156 (433)
T KOG3810|consen 96 KAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL 156 (433)
T ss_pred hheeeehhhcChHHHHH-HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh
Confidence 78878888888876654 34444443333 56889999999888877777777777766543
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.00 E-value=0.61 Score=48.98 Aligned_cols=157 Identities=12% Similarity=0.003 Sum_probs=88.6
Q ss_pred HHHhhhchhHHHHHHHHHhhcccceeeeccHHHHHHhhCCchh--hHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhh
Q 008210 344 FTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIW 421 (574)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~ 421 (574)
++.-++++-|.......++++. -+.+-.....|....|+++. +..=+...+.+..|.....++.+|+|..|-. .+.
T Consensus 252 w~~Y~~q~vflas~alalLY~T-VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G-~~~ 329 (432)
T PF06963_consen 252 WRTYFRQPVFLASFALALLYFT-VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG-LWS 329 (432)
T ss_pred HHHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH-HHH
Confidence 4455566555433333333222 23344455667778899754 5566778888999999999999999877321 122
Q ss_pred HHHHHHHHHHHHHHHHhcC-c-hHHHHHHHHHhh-----hccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHh
Q 008210 422 MTCTQVIMIITYLLFASSI-D-GTLYAATALLGI-----CYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFS 494 (574)
Q Consensus 422 ~~~~~~~~~i~~~~~~~~~-~-~~l~~~~~l~g~-----~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~g 494 (574)
+..=..+...+...+.... + ...-+..++.|+ |.=+.=-...-+++|..|+++||...|+-+...++... +.
T Consensus 330 l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~l-l~ 408 (432)
T PF06963_consen 330 LWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFEL-LS 408 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHH-HH
Confidence 2211122222222222222 2 122222222232 21122234556889999999999999999999888886 43
Q ss_pred HhHHHhhhhh
Q 008210 495 GLLAGYIYDN 504 (574)
Q Consensus 495 p~l~g~l~~~ 504 (574)
.+.+.+...
T Consensus 409 -~~~~ii~~~ 417 (432)
T PF06963_consen 409 -FVLTIIFPR 417 (432)
T ss_pred -HHHHhccCC
Confidence 355555544
No 260
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.88 E-value=0.0039 Score=65.26 Aligned_cols=146 Identities=15% Similarity=0.134 Sum_probs=99.6
Q ss_pred hhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHh
Q 008210 40 SVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATN 118 (574)
Q Consensus 40 ~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 118 (574)
+|.+....-.+-.+.....+-+. -++.+++.+|+|+-+++.+|...+.+=++.. +. .. |.|+.+-.-+++|+
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~----S~-L~--n~W~vLPieilqgi 471 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYY----SY-LQ--NPWMVLPIEILQGI 471 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHH----HH-hc--CchheeeHHHHHHH
Confidence 55665555555455555556554 7888999999999999998888777664332 22 22 46888889999999
Q ss_pred hhHhhhhHHHHHHHhhCC-CCcchHHHHHHhh-hhhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcc
Q 008210 119 SSAWLGTAVLVTNMRNFP-LSRGTVAGILKGY-GGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVR 192 (574)
Q Consensus 119 g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~-~~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (574)
-.+..+.+...+++..-| +-|..+.++.... .|+|--+++.+++.+....+.+..+....+.+++.++....++
T Consensus 472 t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 472 THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999997 5789999988553 4666666666666665544433333333333333333333333
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.83 E-value=0.0028 Score=49.14 Aligned_cols=56 Identities=21% Similarity=0.255 Sum_probs=43.6
Q ss_pred hhcchHHHHhhhCCCHHHHHHHHHHHHhhhh-ccccchhccccCCChHHHHHHHHHH
Q 008210 31 FPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (574)
Q Consensus 31 ~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~-~~~~~G~l~dr~G~r~~~~~g~~~~ 86 (574)
+-.|.+...++.|+|..|++.+.....+..+ ..|++|.++||+++++..+.+...+
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3344555566799999999997766666665 4999999999999999888766553
No 262
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.83 E-value=0.12 Score=52.07 Aligned_cols=129 Identities=12% Similarity=-0.028 Sum_probs=75.0
Q ss_pred HhhhccchhhcchHHHHhhhCCCHHHHHHHHHHHHhhhhccccchhccc-----cCCChHH------HHHHHHHHHHHHH
Q 008210 23 IAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASN-----KFPPWLV------LFIGSLACFFGYG 91 (574)
Q Consensus 23 ~~~g~~~~~~~~~~~l~~~l~~s~~~~~~i~~~~~~~~~~~~~~G~l~d-----r~G~r~~------~~~g~~~~~~g~~ 91 (574)
..-|+.+......|.+-+.-|.|.++.+.++.++.-. ..-+++..+.| |+||||. +++|.++...++
T Consensus 41 llQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~- 118 (510)
T KOG3574|consen 41 LLQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSY- 118 (510)
T ss_pred HHcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhh-
Confidence 3446666544466777777788888888776654333 23555666666 9999995 445555444442
Q ss_pred HHHHHHhhcc----CChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhC-CCCcchHHHHHHhhhhhHHHHH
Q 008210 92 VLWLAVSRTV----ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNF-PLSRGTVAGILKGYGGLSAAVF 157 (574)
Q Consensus 92 ~~~~~~~~~~----~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~f-p~~rg~a~gi~~~~~~~g~~i~ 157 (574)
.+.... ..++...+....++.-+.++.-..+.-...-..- |++.|.|......+...|.+++
T Consensus 119 ----~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 119 ----LVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred ----CCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 111111 1223333333344555566655555555555555 5688888777777776666554
No 263
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.72 E-value=0.047 Score=53.50 Aligned_cols=126 Identities=21% Similarity=0.258 Sum_probs=85.3
Q ss_pred cHHHHHHhhCCc----hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHh-cC--chHHH
Q 008210 373 NLAQIGIAQGVH----DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFAS-SI--DGTLY 445 (574)
Q Consensus 373 ~~~~~~~~~g~~----~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~~l~ 445 (574)
..+.+..+.+.+ ...+..+...+...++.+..|.+.||.||| ..+..+.....++.++... .+ ...+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLALLL 98 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 344444444433 356777788888888889999999999888 3344333323333233322 22 23455
Q ss_pred HHHHHHhhhccchhhhHHHHHHhhcCc-cchhhhhhhhhh-hhhhHHHHHhHhHHHhhhhh
Q 008210 446 AATALLGICYGVQFSIMIPTVSELFGL-EHFGLISNFLAL-GNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 446 ~~~~l~g~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~lg~~~~gp~l~g~l~~~ 504 (574)
+.....|++.+...+....++.|.+|. ++++...+.... ...++.. ++|.+.+.+.+.
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 158 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLA-LGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 555667888888888888999999987 678888888887 4666666 788777777665
No 264
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.64 E-value=0.02 Score=58.90 Aligned_cols=114 Identities=11% Similarity=0.048 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-c---h-----HHHHHHHHHhhhcc
Q 008210 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-D---G-----TLYAATALLGICYG 456 (574)
Q Consensus 386 ~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~-----~l~~~~~l~g~~~g 456 (574)
+.|...++.+..+.-.+.+-|+.||+|-| ....++.....+|.++=.... + . .......+.+..+-
T Consensus 81 ~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~ 155 (480)
T KOG2563|consen 81 ADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQP 155 (480)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhh
Confidence 44566667788888888899999999999 677778888888877533211 1 1 22244455555444
Q ss_pred chhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhh
Q 008210 457 VQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNE 505 (574)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~ 505 (574)
....+.+=+....||+++|..+..+..+++.+|.+ ++..+...+..+.
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGva-vg~llppilV~~~ 203 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVA-VGFLLPPILVPSS 203 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHH-HHhhccceecCCC
Confidence 43333334555568999999999999999999998 8888888777764
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.54 E-value=0.032 Score=59.03 Aligned_cols=148 Identities=19% Similarity=0.160 Sum_probs=90.4
Q ss_pred HhhCCchhhH--HHHHHHHHHhhhhhhhhhhhhhh---hccccCchhhHHHHHHHHHHHHHHHHh-cC----chHHHHHH
Q 008210 379 IAQGVHDTTI--LLSLFSFCNFVGRLGGGVVSEHF---VRKTIPRTIWMTCTQVIMIITYLLFAS-SI----DGTLYAAT 448 (574)
Q Consensus 379 ~~~g~~~~~~--~~~~~~i~~~ig~~~~G~l~Dr~---g~r~~~~~~~~~~~~~~~~i~~~~~~~-~~----~~~l~~~~ 448 (574)
+++|.+.+.. +.+...+ .-...++.|.++|-+ |+| |.+.+.++.++..++...+.. +. .....+..
T Consensus 18 ~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~r---r~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 93 (433)
T PF03092_consen 18 DDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYR---RKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLL 93 (433)
T ss_pred HHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCc---chHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHH
Confidence 4478864332 2222222 234589999999976 333 224555555555444444332 21 12334445
Q ss_pred HHHhhhccchhhhHHHHHHhhcC--ccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCc
Q 008210 449 ALLGICYGVQFSIMIPTVSELFG--LEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPN 526 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (574)
++..+++...-...-+...|... ++.+|...+..+....+|+. ++..+.|.+.+..
T Consensus 94 ~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~l-v~~~l~G~l~~~~--------------------- 151 (433)
T PF03092_consen 94 FLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSL-VGSLLSGPLLDSF--------------------- 151 (433)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHH-HHHHhhhhhhhcC---------------------
Confidence 55566666666666667777652 23378888888889999998 8888999988874
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhh
Q 008210 527 CFRITFFVLAGVCCVGSILSIILNIR 552 (574)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (574)
+++..|.+.+.+..+..+..+.+.+|
T Consensus 152 ~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 152 GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 46777777776666665555555554
No 266
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.51 E-value=0.097 Score=54.10 Aligned_cols=128 Identities=13% Similarity=0.047 Sum_probs=79.1
Q ss_pred cchHHHHhhhCCCHHHHHHHHHHH-Hhhhhccccchhcccc----CCChHHHH-HHHHHHHHHHHHHHHHHhh--c-cCC
Q 008210 33 LYSHSLKSVLGFNQHQLTMLGVAN-DIGENVGLLPGLASNK----FPPWLVLF-IGSLACFFGYGVLWLAVSR--T-VES 103 (574)
Q Consensus 33 ~~~~~l~~~l~~s~~~~~~i~~~~-~~~~~~~~~~G~l~dr----~G~r~~~~-~g~~~~~~g~~~~~~~~~~--~-~~~ 103 (574)
.|.+++..++|.+..-.+.+=.+. ..|.+++|+.|..+|| +||||-++ .+.....++.+++..+..- . -.+
T Consensus 53 sy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~ 132 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN 132 (498)
T ss_pred ccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC
Confidence 455666788999888888753333 4556679999999996 88877544 4555555554443332110 0 011
Q ss_pred hh-------HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCC-CCcch-HHHHHHhhhhhHHHHHHHH
Q 008210 104 LP-------YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGT-VAGILKGYGGLSAAVFTEI 160 (574)
Q Consensus 104 ~~-------~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp-~~rg~-a~gi~~~~~~~g~~i~~~i 160 (574)
.. ..++++.-.|.=+..-....++-....+... +++-+ |+++.....++|+.++-.+
T Consensus 133 ~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 133 ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYAL 198 (498)
T ss_pred cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeec
Confidence 11 1223334445556666777788888899883 33322 8898888888888766333
No 267
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.43 E-value=0.0083 Score=46.48 Aligned_cols=47 Identities=15% Similarity=0.165 Sum_probs=40.7
Q ss_pred eeeeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 008210 368 VTVLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRK 414 (574)
Q Consensus 368 ~~~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r 414 (574)
-.+..+++.+.++.|++ +.+.+.++..+...++.+++|+++||.+++
T Consensus 17 g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 17 GCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34567888899988985 567888899999999999999999999988
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.60 E-value=3.8 Score=43.36 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=41.7
Q ss_pred HHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 449 ALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 449 ~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
++.-+..-..|....+.-+++..|..-|+-+.+.|+..++|+- --..+.=++.|.
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt-WP~~~vL~lVD~ 467 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT-WPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC-chHHHHHHHhhh
Confidence 3334555666777778888899999999999999999999997 544455556665
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.43 E-value=3.8 Score=42.29 Aligned_cols=107 Identities=16% Similarity=0.223 Sum_probs=61.3
Q ss_pred HHHHH-HHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHH--------hcCchHHHHHHHHHhhhccch
Q 008210 388 ILLSL-FSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFA--------SSIDGTLYAATALLGICYGVQ 458 (574)
Q Consensus 388 ~~~~~-~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~~l~~~~~l~g~~~g~~ 458 (574)
..... +++...+|++...++-++-.|+ ....+..=...+.++.++ +.+....+....+.|+..|=.
T Consensus 286 ~~~~l~fN~~d~vG~~~a~~~~~~~~r~-----l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 286 LLVFLSFNVFDLIGSILAALLTWPDPRK-----LTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred HHHHHHhHHHHHhhhhhhhcccCCCCce-----ehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 34445 8899999999888887754333 222222222223333322 223456677788888887766
Q ss_pred hhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 459 FSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 459 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
.++...+..+..+++++-.+-.+....-..|-+ .|. +.+++
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~-~G~-~~s~l 401 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLA-LGS-LLSWV 401 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHH-Hhh-HHHHH
Confidence 666667777777766655555554444333333 444 55554
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.26 E-value=0.073 Score=55.14 Aligned_cols=106 Identities=17% Similarity=0.195 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHHHHHHH---hcC-c------hHHHHHHHHHhhhccchhhhHHHHHHhhcCccc---hhhhhhhhhhhhh
Q 008210 421 WMTCTQVIMIITYLLFA---SSI-D------GTLYAATALLGICYGVQFSIMIPTVSELFGLEH---FGLISNFLALGNP 487 (574)
Q Consensus 421 ~~~~~~~~~~i~~~~~~---~~~-~------~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~ 487 (574)
.+.++.++..+|.+++. ... . ..++++..++++|.|+.=++..+...|.+++++ +...+...+.+-+
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in 82 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHh
Confidence 45566777778877733 221 1 367888889999999999999999999998763 6667778889999
Q ss_pred hHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHH
Q 008210 488 LAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 488 lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
+|+. +++.+.+++.++. +|...|.+..+..+++.+..+.
T Consensus 83 ~G~~-~~~~~~~~i~~~~---------------------~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 83 IGSL-FSPTLVPYIQQNY---------------------GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHH-HHHHCCCHHHHCS----------------------HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhH-hhcccchhhcccc---------------------chhhhhhHHHHHHHHHHHHHHh
Confidence 9998 8998999988773 6999999998888887665443
No 271
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.15 E-value=0.005 Score=66.78 Aligned_cols=176 Identities=14% Similarity=0.095 Sum_probs=2.5
Q ss_pred ccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc--------
Q 008210 372 NNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID-------- 441 (574)
Q Consensus 372 ~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~-------- 441 (574)
..++++-+.++++ +.+++.+.+-++..+..+...+..+|- ||+.++..+.+++++|.++++.++.
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-----hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-----HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 3455555667773 677788888888777776666665543 3335777788888888777542110
Q ss_pred -------------------------------------------hHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhh
Q 008210 442 -------------------------------------------GTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLI 478 (574)
Q Consensus 442 -------------------------------------------~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~ 478 (574)
..++++-++.|+|....+++-.+++-|..++++.+.-
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splY 178 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLY 178 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccc
Confidence 0133445677888888889999999999999999999
Q ss_pred hhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccc-cccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhh
Q 008210 479 SNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFN-LLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRI 553 (574)
Q Consensus 479 ~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (574)
.|+.++...+|.. +|-.+++.+...+.+...... ....+..-..+.+.|-..|.+.+.+.++..+..+.+.++.
T Consensus 179 iGi~~~~~~lGPa-~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 179 IGILYAMSILGPA-LGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred hhhhhHHhhccHH-HHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 9999999888887 788777777654432211000 0000011123334555566666666555554444444443
No 272
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.03 E-value=6.8 Score=42.92 Aligned_cols=152 Identities=14% Similarity=0.078 Sum_probs=88.8
Q ss_pred ccCcHHHHHHHHHHHHhh-hccchh-hcchHHHHhhhCCCHHHHHH-HHHHHHhhhhccccchhccc-cCCChHHHHHHH
Q 008210 8 SRPPWVGLGAAVWVQIAA-GNAYNF-PLYSHSLKSVLGFNQHQLTM-LGVANDIGENVGLLPGLASN-KFPPWLVLFIGS 83 (574)
Q Consensus 8 ~~~~w~~~~~~~l~~~~~-g~~~~~-~~~~~~l~~~l~~s~~~~~~-i~~~~~~~~~~~~~~G~l~d-r~G~r~~~~~g~ 83 (574)
++.+|......+....+. .+.+.+ ..+..++.++++.+..++.- ++..........+..+.++| .+||=+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345566654444443333 233333 45556778888888766665 55555555566899999999 567888999988
Q ss_pred HHHHHHHHHHHHHHhhc---------------cCChh---HHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCC-----Ccc
Q 008210 84 LACFFGYGVLWLAVSRT---------------VESLP---YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-----SRG 140 (574)
Q Consensus 84 ~~~~~g~~~~~~~~~~~---------------~~~~~---~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~-----~rg 140 (574)
++..+|..++-...... ...++ ...++...-+..+|.|..-+.....-++-|++ ++.
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 88888844433221111 01111 12344455566778888777777778888861 123
Q ss_pred --hHHHHHHhhhhhHHHHHHH
Q 008210 141 --TVAGILKGYGGLSAAVFTE 159 (574)
Q Consensus 141 --~a~gi~~~~~~~g~~i~~~ 159 (574)
.-..++......|..+.-.
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred cccchhHHHHHHHHHHHHHHH
Confidence 3344444455555544433
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.78 E-value=5.8 Score=42.51 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=38.6
Q ss_pred HHHHhhhC---CCHHHHHHHHHHHHh-hh-hccccchhccccCCChHHHHHHHHHHHHHHHHHHH
Q 008210 36 HSLKSVLG---FNQHQLTMLGVANDI-GE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWL 95 (574)
Q Consensus 36 ~~l~~~l~---~s~~~~~~i~~~~~~-~~-~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~ 95 (574)
.+++|.+= ..++.+..+-+...+ .+ ++..+..+++||+++.+++.+.+..+..-+.++++
T Consensus 44 R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~ 108 (491)
T PF03219_consen 44 RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAF 108 (491)
T ss_pred HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44555442 245556666554444 33 34888999999999999988776666655555444
No 274
>PRK03612 spermidine synthase; Provisional
Probab=94.31 E-value=1.2 Score=48.19 Aligned_cols=112 Identities=16% Similarity=0.192 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHH-HHHHHHHHHH-H---hcCc--hHHHHHHHHHhhhccch
Q 008210 386 TTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQ-VIMIITYLLF-A---SSID--GTLYAATALLGICYGVQ 458 (574)
Q Consensus 386 ~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~-~~~~i~~~~~-~---~~~~--~~l~~~~~l~g~~~g~~ 458 (574)
.+.+.+.+..+..+|..+++++.++.-++. ...-+.. ++..++..++ . .... ...+...++.++..|..
T Consensus 52 ~~~ii~~fl~glalGs~l~~~~~~~~~~~~----~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 127 (521)
T PRK03612 52 FSTVIGLMLFAMGVGALLSKYLLRDAAAGF----VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGME 127 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777777777776654332220 1111111 1111111111 1 1111 12234445567777887
Q ss_pred hhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 459 FSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 459 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
+|...-+..+.. .++.|...|-++..+.+|+. +|..+.+++.-
T Consensus 128 ~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~-~G~l~~~~vLl 170 (521)
T PRK03612 128 IPLLMRILQRIR-DQHLGHNVATVLAADYLGAL-VGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHH-HHHHHHHHHHH
Confidence 777665554432 23467778888888888887 88888888765
No 275
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.30 E-value=0.63 Score=49.47 Aligned_cols=48 Identities=19% Similarity=0.274 Sum_probs=40.4
Q ss_pred cchhh-hHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhh
Q 008210 456 GVQFS-IMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDN 504 (574)
Q Consensus 456 g~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~ 504 (574)
....+ .....+.|++..++..+-++++..++++|.. +++.+..++.+.
T Consensus 143 ~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i-~sg~~~~~~~~~ 191 (472)
T TIGR00769 143 SVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALI-FSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 34444 6778999999999999999999999999998 888888887653
No 276
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.27 E-value=1.5 Score=45.52 Aligned_cols=158 Identities=11% Similarity=0.163 Sum_probs=97.1
Q ss_pred eccHHHHHHh--hCCchhhH---HHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-chHH
Q 008210 371 LNNLAQIGIA--QGVHDTTI---LLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-DGTL 444 (574)
Q Consensus 371 ~~~~~~~~~~--~g~~~~~~---~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l 444 (574)
-.++.+|+.+ .|+++... +.-...-...+..+....+.|.++.| .++++..+...+...++...+ ...+
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~sv~~m 97 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTSVLAM 97 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCcHHHH
Confidence 3566666655 57743221 22222233444566788999999888 566665555555555544433 3345
Q ss_pred HHHHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhhhhhcccccccCCcccccC
Q 008210 445 YAATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLG 524 (574)
Q Consensus 445 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (574)
-+.-+..|++.+.- ....+++=...++++.-++.+...++..+|.+ ++..++-.+.... .
T Consensus 98 q~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~-~s~~lgQllvs~~-~----------------- 157 (412)
T PF01770_consen 98 QLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRF-ISSLLGQLLVSFG-G----------------- 157 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhc-C-----------------
Confidence 55556666654442 33455665667889999999998888888877 6774444444421 1
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhhhh
Q 008210 525 PNCFRITFFVLAGVCCVGSILSIILNIRIR 554 (574)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (574)
.+|....++..+...++++.++++.+.+|
T Consensus 158 -~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 158 -VSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 35888888888777787777777765443
No 277
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.76 E-value=0.13 Score=56.87 Aligned_cols=173 Identities=13% Similarity=0.110 Sum_probs=109.4
Q ss_pred HHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-----------
Q 008210 374 LAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI----------- 440 (574)
Q Consensus 374 ~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~----------- 440 (574)
+.++-+.++++ +++++.+.+-+++.+......+...|..| ..++..+.++++++.++.+.++
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~Hr-----Pr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~ 194 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHR-----PRWIGIGLVLMGLGSLLFALPHFFSGPYEYELE 194 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCc-----cceeeechhHHHHHHHHHhChHHhcCcchhhhh
Confidence 44444445663 45666666666666665555555444333 3567777777877777654210
Q ss_pred --------c--------------------------------h--HHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhh
Q 008210 441 --------D--------------------------------G--TLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLI 478 (574)
Q Consensus 441 --------~--------------------------------~--~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~ 478 (574)
+ . .++.+-++.|+|....+++-..++-|...+++-+.-
T Consensus 195 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplY 274 (735)
T KOG3626|consen 195 VIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLY 274 (735)
T ss_pred hhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHH
Confidence 0 0 123345677888888889888999999999999999
Q ss_pred hhhhhhhhhhHHHHHhHhHHHhhhhhhhhh-hcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008210 479 SNFLALGNPLAAFLFSGLLAGYIYDNEAAK-QQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSIILNIRIRP 555 (574)
Q Consensus 479 ~g~~~~~~~lg~~~~gp~l~g~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (574)
.|+.++...+|-+ +|-.+++++...+.+. ... ...+..-..+.+.|...|++++.+.++..+..+++.++.++
T Consensus 275 lgi~~~~~~lGPa-iGfllgS~~l~lYvD~~~~~---~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 275 LGILYSMAILGPA-IGFLLGSFCLKLYVDFGLSP---IGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHhhhH-HHHHHHHHHHHeeeccccCC---CCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 9999999888887 8888888877655433 100 00111222344566677777777777776666655554443
No 278
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.67 E-value=0.54 Score=48.63 Aligned_cols=116 Identities=11% Similarity=0.090 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhhCCCC----cchHHHHHHhhh
Q 008210 77 LVLFIGSLACFFGYGVLWLAVSRTVE--SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS----RGTVAGILKGYG 150 (574)
Q Consensus 77 ~~~~~g~~~~~~g~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~fp~~----rg~a~gi~~~~~ 150 (574)
|++++|.++..+|.+++.++...... +...+.++++-.+.++|.|+.-+.......|.|+++ |.....+...+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788999999997775444222211 112356788888899999999999999999999632 455666777778
Q ss_pred hhHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcc
Q 008210 151 GLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVR 192 (574)
Q Consensus 151 ~~g~~i~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (574)
.+|+.++..+...+-++..|.+-+.+..+..+++++..+.-+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 888877766666665667787777777766666666555443
No 279
>PRK03612 spermidine synthase; Provisional
Probab=93.53 E-value=3.6 Score=44.59 Aligned_cols=153 Identities=14% Similarity=-0.010 Sum_probs=74.0
Q ss_pred HHhhhCCCHHHHHHHHHHHHhhhhc-cccchhccccCCChHHHHHHHHH--HHHHHHHHHHHHhhccCChhHHHHHHHHH
Q 008210 38 LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLA--CFFGYGVLWLAVSRTVESLPYWLLWIALC 114 (574)
Q Consensus 38 l~~~l~~s~~~~~~i~~~~~~~~~~-~~~~G~l~dr~G~r~~~~~g~~~--~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (574)
+.--+|-+..+.+.+.+.+++|..+ +.+.+++.++.-++.. .+-+.+ ++............+. ......++..-+
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~-~~~~~~~~~~~~ 118 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQ-GLSRLLLYVLVL 118 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 3444676777777766667777755 7777776643222221 111111 1111001000111110 001111222344
Q ss_pred HHHhhhHhhhhHHHHHHHhhCCCCcchHHHHHHhhhhhHHHHHHHHHHHhcc--CChhHHHHHHHHHHHHHHHHHHHhcc
Q 008210 115 VATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLH--NSSSKLLLVLAVGVPAVCLVMMYFVR 192 (574)
Q Consensus 115 l~G~g~g~~~~~~~~~~~~~fp~~rg~a~gi~~~~~~~g~~i~~~i~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (574)
+.++-.|+..|....+..+...++-|...|-+.....+|+++++.+...++- -......+..+.+..+++++..+..+
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~~~ 198 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWLFR 198 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666665555555544333345566677777777777777777665432 23445555555555555554444443
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.32 E-value=0.42 Score=50.34 Aligned_cols=100 Identities=13% Similarity=-0.038 Sum_probs=84.4
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHhh
Q 008210 390 LSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSEL 469 (574)
Q Consensus 390 ~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~ 469 (574)
.++......+..+..+.+.|+++.| |.+.++......-...+...+.+.++...++.|+|.+..+.....+++|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K-----~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPK-----WALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHH-----HHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 6677778888889999999999999 88888777777766666667788899999999999999888888999999
Q ss_pred cCccchhhhhhhhhhhhhhHHHHHhH
Q 008210 470 FGLEHFGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 470 ~~~~~~g~~~g~~~~~~~lg~~~~gp 495 (574)
..+|...+..++.......+.. +|.
T Consensus 131 st~~tie~Nisi~Wai~~~~li-~Gg 155 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLI-IGG 155 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHH-hhh
Confidence 9999999999998777777765 554
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.39 E-value=0.092 Score=52.86 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=2.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh-hccccCchhhHHH--HHHHHHHHHHHHH------------hcCchHHHHHHHHHhh
Q 008210 389 LLSLFSFCNFVGRLGGGVVSEHF-VRKTIPRTIWMTC--TQVIMIITYLLFA------------SSIDGTLYAATALLGI 453 (574)
Q Consensus 389 ~~~~~~i~~~ig~~~~G~l~Dr~-g~r~~~~~~~~~~--~~~~~~i~~~~~~------------~~~~~~l~~~~~l~g~ 453 (574)
....+++++.+||.+.++..=+. .+| ++... .=++. +.++++. ..+....++...++|+
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~-----~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~ 260 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPR-----WLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF 260 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccc-----cHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH
Confidence 45578999999999988743110 122 22211 11111 2222222 1122345566778888
Q ss_pred hccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhH
Q 008210 454 CYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 454 ~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 495 (574)
..|-..+....+..+..+++++..+-.+....-.+|-. +|.
T Consensus 261 TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~-~Gs 301 (309)
T PF01733_consen 261 TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLF-IGS 301 (309)
T ss_dssp ------HHHH--------------------------------
T ss_pred ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 77766666666777777777777776666655555554 555
No 282
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=89.96 E-value=1 Score=35.39 Aligned_cols=67 Identities=13% Similarity=0.110 Sum_probs=49.5
Q ss_pred eeccHHHHHHhhCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCc
Q 008210 370 VLNNLAQIGIAQGVH--DTTILLSLFSFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSID 441 (574)
Q Consensus 370 ~~~~~~~~~~~~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~ 441 (574)
+...+|.+.++.+++ +.+++.+...++..+|.+...++.++..++ .++..+.+...+....+...+.
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHhc
Confidence 455788888887774 678899999999999999999888875444 4566666666666666665443
No 283
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=89.12 E-value=6.5 Score=40.17 Aligned_cols=141 Identities=18% Similarity=0.230 Sum_probs=70.6
Q ss_pred hHHHHHHHHHhhcccceeeeccHHHHHHhhCCchhhHHHHHHHHHHhhhhhhhhhhhh-----hhhccccCchhhHHHHH
Q 008210 352 DFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDTTILLSLFSFCNFVGRLGGGVVSE-----HFVRKTIPRTIWMTCTQ 426 (574)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~ig~~~~G~l~D-----r~g~r~~~~~~~~~~~~ 426 (574)
++..+.+.+... +.=......+|.++++.|.+-......-+.---..-.++|..+.| |+|||| .|+.-+-.
T Consensus 32 ~illLl~LYllQ-GiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~Grrk---sWvvp~q~ 107 (510)
T KOG3574|consen 32 SILLLLFLYLLQ-GIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRK---SWVVPCQY 107 (510)
T ss_pred hHHHHHHHHHHc-CCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhcccc---ceeeehHH
Confidence 455555555443 222334447888888766642211111111112234788999999 999993 34444433
Q ss_pred HHHHHHHHHHHhcC--------chHHHH---HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhH
Q 008210 427 VIMIITYLLFASSI--------DGTLYA---ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 427 ~~~~i~~~~~~~~~--------~~~l~~---~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp 495 (574)
++..+...+....+ .+...+ ...+.=+..+..=...-...-++..+|+.|-+...-..+...|.+ ++.
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf-L~~ 186 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF-LGN 186 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH-hhc
Confidence 33333222222111 111111 222222333333233344555667788888888777777777776 554
Q ss_pred hH
Q 008210 496 LL 497 (574)
Q Consensus 496 ~l 497 (574)
.+
T Consensus 187 ~i 188 (510)
T KOG3574|consen 187 VV 188 (510)
T ss_pred ce
Confidence 33
No 284
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=87.85 E-value=11 Score=39.75 Aligned_cols=117 Identities=13% Similarity=0.093 Sum_probs=71.2
Q ss_pred hhhCCCHHHHHHH-HHHHHhhhhccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccC---ChhHHHHHHHHHH
Q 008210 40 SVLGFNQHQLTML-GVANDIGENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVE---SLPYWLLWIALCV 115 (574)
Q Consensus 40 ~~l~~s~~~~~~i-~~~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~---~~~~~~l~~~~~l 115 (574)
..-|++...++.+ +.....+....+...++.+|+|..+.-+++...=.....+....+..... ..+...++.+-++
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~ 365 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIAL 365 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 3349999999996 44444555668899999999999998888766332221121111111111 1123333333444
Q ss_pred HHhhhHhhhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHH
Q 008210 116 ATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAV 156 (574)
Q Consensus 116 ~G~g~g~~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i 156 (574)
.=+|-=........++-+..| ++||...|.-.+-.++-..+
T Consensus 366 SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 366 SRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 444443444566667778888 58999999988877665433
No 285
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=83.10 E-value=12 Score=41.05 Aligned_cols=154 Identities=15% Similarity=0.175 Sum_probs=94.7
Q ss_pred eeeeccHHHHHHh-hCCc--hhhHHHHHHHHHHhhhhhhhhhhhhhh-hccccCchhhHHHHHHHHHHHHHHHHh----c
Q 008210 368 VTVLNNLAQIGIA-QGVH--DTTILLSLFSFCNFVGRLGGGVVSEHF-VRKTIPRTIWMTCTQVIMIITYLLFAS----S 439 (574)
Q Consensus 368 ~~~~~~~~~~~~~-~g~~--~~~~~~~~~~i~~~ig~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~i~~~~~~~----~ 439 (574)
.....++-.|... ++.+ .+...+..+........+.+++++|.+ ||- +.+.++.++..+|+.++.. .
T Consensus 54 ~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry-----~tI~~~s~i~~~G~~~lt~~a~~~ 128 (571)
T KOG1237|consen 54 FGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY-----FTINIGSLISLLGLFGLTLSAMIP 128 (571)
T ss_pred hcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344455555543 4553 445566777777888889999999964 555 5666666666666544321 0
Q ss_pred ----------------Cc------hHHHHHHHHHhhhccchhhhHHHHHHhhcCccc----hh--hhhhhhhhhhhhHHH
Q 008210 440 ----------------ID------GTLYAATALLGICYGVQFSIMIPTVSELFGLEH----FG--LISNFLALGNPLAAF 491 (574)
Q Consensus 440 ----------------~~------~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~----~g--~~~g~~~~~~~lg~~ 491 (574)
.. ..++...-+..+|.|+.-+.....-+|-++.++ +. .-+...+...++|..
T Consensus 129 ~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l 208 (571)
T KOG1237|consen 129 ALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGAL 208 (571)
T ss_pred hcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHH
Confidence 00 134555666778889999999999999988322 22 334444455555655
Q ss_pred HHhHhHHHhhhhhhhhhhcccccccCCcccccCCccchhHHHHHHHHHHHHHHHHHH
Q 008210 492 LFSGLLAGYIYDNEAAKQQGFNLLTSNVVSCLGPNCFRITFFVLAGVCCVGSILSII 548 (574)
Q Consensus 492 ~~gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (574)
++..+.-++-|+ .+|...|.+..++..+++++.+.
T Consensus 209 -~a~t~~vyiq~~---------------------~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 209 -LAQTVLVYIQDN---------------------VGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred -HHHHHHHhhhhc---------------------ccceeeccHHHHHHHHHHHHHHc
Confidence 444444444344 35888888887777776655443
No 286
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=80.01 E-value=3.3 Score=43.22 Aligned_cols=123 Identities=11% Similarity=0.113 Sum_probs=77.9
Q ss_pred eccHHHHHHhhCCch--hhHHHHHHHHHHhhhhhhhhhhhhh----hhccccCchhhHHHHHHHHHHHHHHHHhc-----
Q 008210 371 LNNLAQIGIAQGVHD--TTILLSLFSFCNFVGRLGGGVVSEH----FVRKTIPRTIWMTCTQVIMIITYLLFASS----- 439 (574)
Q Consensus 371 ~~~~~~~~~~~g~~~--~~~~~~~~~i~~~ig~~~~G~l~Dr----~g~r~~~~~~~~~~~~~~~~i~~~~~~~~----- 439 (574)
..++++|.+++|.++ .+......=+.+.+-.|+.|..+|| +|||| ..+.......+++++++...
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR----PfI~~~s~~i~~~l~Lig~aaDig~ 127 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR----PFILAGSLLIAVSLFLIGYAADIGL 127 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceeccccccccccccccccccc----chHHHhhHHHHHHHhhhhhHhhhhH
Confidence 457889999999953 3333334445677789999999995 56662 45666667777777665421
Q ss_pred ----Cc----hHHHHHHHHHh-----hhccchhhhHHHHHHhhcCccchhh-hhhhhhhhhhhHHHHHhHhHH
Q 008210 440 ----ID----GTLYAATALLG-----ICYGVQFSIMIPTVSELFGLEHFGL-ISNFLALGNPLAAFLFSGLLA 498 (574)
Q Consensus 440 ----~~----~~l~~~~~l~g-----~~~g~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~lg~~~~gp~l~ 498 (574)
+. ...-+...+.| ++.-......=++..|.....++-+ +.+....+.++|+. +|-.+.
T Consensus 128 ~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv-LGY~~g 199 (498)
T KOG0637|consen 128 LLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNV-LGYALG 199 (498)
T ss_pred HhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcce-eeeecc
Confidence 11 11223333344 3333334444578889887777666 88888888888886 665443
No 287
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=78.38 E-value=33 Score=35.66 Aligned_cols=117 Identities=9% Similarity=-0.015 Sum_probs=73.4
Q ss_pred CCCHHHHHHHHHHHHhhhhccccchhccccCCChHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHh
Q 008210 43 GFNQHQLTMLGVANDIGENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAW 122 (574)
Q Consensus 43 ~~s~~~~~~i~~~~~~~~~~~~~~G~l~dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~ 122 (574)
.--..++.+....+-+|-.++=-...+. |+ |++.+...+-..-..+++.-+.-.+. ++.|..++.-+.-|+-+|.
T Consensus 277 ~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~-ri--r~lwils~LQ~~nl~~~~l~s~~~fi--psi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 277 FSPRDQYRWYQLLYQLGVFISRSSLPFF-RI--RRLWILSLLQVINLVFLLLQSWYRFI--PSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhcceeee-eh--hhHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhhH
Confidence 3345567777777777765422122222 34 44443333322222112111211222 3577777778888999999
Q ss_pred hhhHHHHHHHhhCC-CCcchHHHHHHhhhhhHHHHHHHHHHHh
Q 008210 123 LGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (574)
Q Consensus 123 ~~~~~~~~~~~~fp-~~rg~a~gi~~~~~~~g~~i~~~i~~~l 164 (574)
.|.-+...+.+..| ++|..++|....+-+.|-.+++.++-.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99988888888886 6899999999999999887776665543
No 288
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.46 E-value=19 Score=29.44 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=23.4
Q ss_pred cchhhhhhhhhhhhhhHHHHHhHhHHHhhhhhhh
Q 008210 473 EHFGLISNFLALGNPLAAFLFSGLLAGYIYDNEA 506 (574)
Q Consensus 473 ~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~~~~ 506 (574)
+.++.+.++-...-.+++.++|. ..||+.|++.
T Consensus 38 s~k~~~~a~klssefIsGilVGa-~iG~llD~~a 70 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGA-GIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 34566666666666777775655 8999999973
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=66.30 E-value=1.7e+02 Score=30.47 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=23.5
Q ss_pred eeeeccHHHHHHhh-CCchhhHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 008210 368 VTVLNNLAQIGIAQ-GVHDTTILLSLFSFCNFVGRLGGGVVSEHFVRK 414 (574)
Q Consensus 368 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~i~~~ig~~~~G~l~Dr~g~r 414 (574)
..++...+++.+.. +.+.+......+.+...+..++.-.+-.|...|
T Consensus 35 N~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 35 NMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred HhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444443 334444455555555555555555555554444
No 290
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=64.02 E-value=1.5e+02 Score=28.91 Aligned_cols=21 Identities=14% Similarity=0.376 Sum_probs=14.9
Q ss_pred ccHHHhhhchhHHHHHHHHHh
Q 008210 342 FKFTEAVVKADFWLLFLVYFA 362 (574)
Q Consensus 342 ~~~~~~l~~~~~~~~~~~~~~ 362 (574)
.+..+.+|+++.|.....+..
T Consensus 85 ~s~~~~LK~K~tw~w~~~Yg~ 105 (267)
T PF07672_consen 85 PSYKSILKEKETWKWILIYGI 105 (267)
T ss_pred chHHHHHccchHHHHHHHHHH
Confidence 456788999988776655543
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=60.85 E-value=14 Score=36.01 Aligned_cols=63 Identities=19% Similarity=0.166 Sum_probs=35.1
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcC-c-hHHHHHHHHHhhhccchhhhHHH-HHHhhc
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSI-D-GTLYAATALLGICYGVQFSIMIP-TVSELF 470 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~l~~~~~l~g~~~g~~~~~~~~-~~~~~~ 470 (574)
..+.|-+.||.|||+-. +. ..+...++ ++...+ + ..+.+..++-|+.....|+..-. ++.|-.
T Consensus 89 GtivgSLaDkqGRKrac----vt-ycitYiLs--CiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 89 GTIVGSLADKQGRKRAC----VT-YCITYILS--CITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHhhhccccce----ee-ehHHHHHH--HHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 34567889999999421 11 11122222 122222 2 36677888888887777776655 444543
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=57.44 E-value=72 Score=34.16 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=25.9
Q ss_pred HHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhh
Q 008210 464 PTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIY 502 (574)
Q Consensus 464 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~ 502 (574)
...-++..+++.+-+...-..+...|.+ ++-.++=.+.
T Consensus 141 GWALT~Ls~~n~~~ASTcqtvG~~~Gyf-ls~tvFlaln 178 (544)
T PF13000_consen 141 GWALTMLSPENVGYASTCQTVGQTAGYF-LSFTVFLALN 178 (544)
T ss_pred hhhhhhcChhhcchHHHHHHhHhhhhHH-HHHHHHHhhC
Confidence 3444566788888888887777788877 6655554443
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=52.78 E-value=1.6e+02 Score=31.63 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=35.7
Q ss_pred hHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhhhh
Q 008210 461 IMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYIYD 503 (574)
Q Consensus 461 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l~~ 503 (574)
+....+.|++..++..+-++++..+.+++.. ++..+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli-~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLI-FSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4567889999999999999999999999997 67767777766
No 294
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=50.04 E-value=1.8e+02 Score=29.19 Aligned_cols=49 Identities=12% Similarity=0.249 Sum_probs=37.1
Q ss_pred HHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhH
Q 008210 448 TALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLL 497 (574)
Q Consensus 448 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l 497 (574)
...=|+-.|..+..+.--+.+..++++|-.+++.+...-.+|-. ++..+
T Consensus 349 I~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~-lA~~l 397 (409)
T KOG3880|consen 349 ILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIF-LAGLL 397 (409)
T ss_pred HHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHH-HHHHH
Confidence 33347777777888787788878889999999999888888876 44433
No 295
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=49.12 E-value=27 Score=32.89 Aligned_cols=91 Identities=13% Similarity=0.003 Sum_probs=54.1
Q ss_pred cccchhccccCCChH--------HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhHHHHHHHhh
Q 008210 63 GLLPGLASNKFPPWL--------VLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRN 134 (574)
Q Consensus 63 ~~~~G~l~dr~G~r~--------~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~ 134 (574)
-+=.+.+.||||.+. ++++|.++-.+- +.+..+-.++ .+..+=.....=.|+|+|-+..++...+...
T Consensus 124 Ep~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtif---fsllas~~a~-~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~ 199 (241)
T PF11299_consen 124 EPNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIF---FSLLASLLAS-LGIFHPYALAMASGVGSGSMMAAASGALAAA 199 (241)
T ss_pred CcceeeeehhcCCCCccccceEEEeeehhhHHHHH---HHHHHHHHHh-ccCCCHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 456678899999554 344444432222 2111110111 0111223334446899999999999999999
Q ss_pred CCCCcchHHHHHHhhhhhHHHHH
Q 008210 135 FPLSRGTVAGILKGYGGLSAAVF 157 (574)
Q Consensus 135 fp~~rg~a~gi~~~~~~~g~~i~ 157 (574)
+|+......++..+.+-+.++.+
T Consensus 200 ~P~~a~~i~A~AaaSNllt~~~G 222 (241)
T PF11299_consen 200 YPEMADQILAFAAASNLLTSVTG 222 (241)
T ss_pred CcchHHHHHHHHHHHHHHHHHHH
Confidence 99877777777777766655544
No 296
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=47.67 E-value=3.5e+02 Score=28.63 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=20.2
Q ss_pred HHHHHhhhccchhhhHHHHHHhhcCccchhhhhhhhhhhhhhHHH
Q 008210 447 ATALLGICYGVQFSIMIPTVSELFGLEHFGLISNFLALGNPLAAF 491 (574)
Q Consensus 447 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 491 (574)
..++.|++.+...+....+.+ .+|++. ++.+..+.++++.
T Consensus 112 ~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv 151 (437)
T TIGR00939 112 SVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGV 151 (437)
T ss_pred HHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHH
Confidence 344556665555544444444 677544 3333445555554
No 297
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=42.69 E-value=31 Score=34.63 Aligned_cols=70 Identities=11% Similarity=-0.031 Sum_probs=40.4
Q ss_pred HHHHhhhhhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhccchhhhHHHHHHh
Q 008210 394 SFCNFVGRLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASSIDGTLYAATALLGICYGVQFSIMIPTVSE 468 (574)
Q Consensus 394 ~i~~~ig~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~ 468 (574)
........++.+.+..++|-| +.+.++..........-..+....++......|++.+..+..--.++++
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K-----~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~ 137 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTK-----WTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTP 137 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecH
Confidence 344445556666899999999 6665443332221111111122367778888999988877654444433
No 298
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=39.31 E-value=4.4e+02 Score=27.04 Aligned_cols=115 Identities=19% Similarity=0.243 Sum_probs=53.1
Q ss_pred chhhHHHHHHHHHHhhhhhhhhhhhhh-hhccccCchhhH-HHHHHHHHHHHHHHHhcC---chHHHHHHHHHhhhccch
Q 008210 384 HDTTILLSLFSFCNFVGRLGGGVVSEH-FVRKTIPRTIWM-TCTQVIMIITYLLFASSI---DGTLYAATALLGICYGVQ 458 (574)
Q Consensus 384 ~~~~~~~~~~~i~~~ig~~~~G~l~Dr-~g~r~~~~~~~~-~~~~~~~~i~~~~~~~~~---~~~l~~~~~l~g~~~g~~ 458 (574)
-+.+.+.+.+..++.+|..+.=++.|. .-.|.+..-.++ +++.+-..+.++.++... ...+++...++|.-.|.-
T Consensus 43 lq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~E 122 (508)
T COG4262 43 LQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAE 122 (508)
T ss_pred eehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcc
Confidence 355666667777777776666655553 111100000011 111111111111223222 236677888888888888
Q ss_pred hhhHHHHHHhhcCccchhhhhhhhhhhhhhHHHHHhHhHHHhh
Q 008210 459 FSIMIPTVSELFGLEHFGLISNFLALGNPLAAFLFSGLLAGYI 501 (574)
Q Consensus 459 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~gp~l~g~l 501 (574)
.|+...+..... +......+.+...-.+|+. .+.++..++
T Consensus 123 iPL~mrml~~r~--a~~k~~~s~vl~~DYLGal-~~gLl~p~l 162 (508)
T COG4262 123 IPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGAL-AGGLLWPFL 162 (508)
T ss_pred hHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhh-hHHHHHHHH
Confidence 777766665521 2222222233333445554 444444444
No 299
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=29.73 E-value=6.9e+02 Score=26.38 Aligned_cols=77 Identities=13% Similarity=0.032 Sum_probs=42.4
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhh
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLIS 479 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~ 479 (574)
.++.=++.+.+.++++|+.-..++++.+...-+++++.. +. ....+..+.. .....+...++..++..+.+|...
T Consensus 308 TF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi-~F~~AYliAa---~a~i~Li~~Y~~~vl~~~k~~~~~ 383 (430)
T PF06123_consen 308 TFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHI-GFNLAYLIAA---LACIGLISLYLSSVLKSWKRGLIF 383 (430)
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhh-chHHHHHHHH---HHHHHHHHHHHHHHHhcchHHHHH
Confidence 455667888888888888776776666655555555532 21 1112222221 112234455666676666666555
Q ss_pred hh
Q 008210 480 NF 481 (574)
Q Consensus 480 g~ 481 (574)
+.
T Consensus 384 ~~ 385 (430)
T PF06123_consen 384 AG 385 (430)
T ss_pred HH
Confidence 44
No 300
>PRK11715 inner membrane protein; Provisional
Probab=28.74 E-value=7.2e+02 Score=26.29 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=41.5
Q ss_pred hhhhhhhhhhhhccccCchhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHhhhccchhhhHHHHHHhhcCccchhhhh
Q 008210 401 RLGGGVVSEHFVRKTIPRTIWMTCTQVIMIITYLLFASS-IDGTLYAATALLGICYGVQFSIMIPTVSELFGLEHFGLIS 479 (574)
Q Consensus 401 ~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~g~~~ 479 (574)
.++.=++.+.+.++++|+.--.+++..+...-+++++.. |.. ...+..+.. .....+...|+..+.....+|..+
T Consensus 314 TF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHig-F~~AYliAa---~a~v~li~~Y~~~vl~~~k~g~~~ 389 (436)
T PRK11715 314 TFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIG-FTLAYLIAA---LACVLLIGFYLSAVLRSWKRGLLF 389 (436)
T ss_pred HHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHH---HHHHHHHHHHHHHHHhcchHHHHH
Confidence 445567888888888887766676666655555555532 321 111111111 111233445666666666666665
Q ss_pred hh
Q 008210 480 NF 481 (574)
Q Consensus 480 g~ 481 (574)
+.
T Consensus 390 ~~ 391 (436)
T PRK11715 390 AA 391 (436)
T ss_pred HH
Confidence 44
No 301
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=28.22 E-value=1.1e+02 Score=23.57 Aligned_cols=19 Identities=16% Similarity=0.417 Sum_probs=11.7
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 008210 528 FRITFFVLAGVCCVGSILS 546 (574)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~ 546 (574)
++.++++.++..+++++++
T Consensus 34 ~~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 34 FSYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHHHHhhe
Confidence 5777777666555555443
No 302
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=28.08 E-value=5.8e+02 Score=24.93 Aligned_cols=99 Identities=13% Similarity=0.136 Sum_probs=42.9
Q ss_pred HHHHHhhhhcc-ccchhccc-cCCChHHHH----HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHhhhHhhhhH
Q 008210 53 GVANDIGENVG-LLPGLASN-KFPPWLVLF----IGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTA 126 (574)
Q Consensus 53 ~~~~~~~~~~~-~~~G~l~d-r~G~r~~~~----~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~ 126 (574)
...+..+..++ ...|.... ++-||+-+. +|.+++.+.++. . ...+..++..+..++++.++.|+-.=... .
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~-~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ-~ 223 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-V-YFVGPGNAAGFAFFYIFGFLAGFFLWGIQ-G 223 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-H-HHhCcchHHHHHHHHHHHHHHHHHHHhhh-H
Confidence 33444455444 34454433 233555332 445555555322 1 11222222235566777777765321121 2
Q ss_pred HHHHHHhhC----CCCcchHHHHHHhhhhhHHHHH
Q 008210 127 VLVTNMRNF----PLSRGTVAGILKGYGGLSAAVF 157 (574)
Q Consensus 127 ~~~~~~~~f----p~~rg~a~gi~~~~~~~g~~i~ 157 (574)
....+-+.+ |++-|...|+.+ |+|.++.
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iW---GfGY~~y 255 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIW---GFGYIFY 255 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHH---HHHHHHH
Confidence 222233334 344555555544 4555444
No 303
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.51 E-value=1.4e+02 Score=28.35 Aligned_cols=92 Identities=18% Similarity=0.053 Sum_probs=53.4
Q ss_pred hhhhhhhhhhhcc---ccCchhhHHHHHHHHHHHHHHHHh----cCchHHHHHHHHHhhhccchhhhHHHHHHhhcCccc
Q 008210 402 LGGGVVSEHFVRK---TIPRTIWMTCTQVIMIITYLLFAS----SIDGTLYAATALLGICYGVQFSIMIPTVSELFGLEH 474 (574)
Q Consensus 402 ~~~G~l~Dr~g~r---~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 474 (574)
+-.+.+.||+|-. .....-.+.++.++.++.+-+++. .+...-+...+-.|.|.|........-+.+.+| +.
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~ 203 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EM 203 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-ch
Confidence 3456788888877 223334455555555554444331 122234445556677777766666667777785 66
Q ss_pred hhhhhhhhhhhhhhHHHHHhH
Q 008210 475 FGLISNFLALGNPLAAFLFSG 495 (574)
Q Consensus 475 ~g~~~g~~~~~~~lg~~~~gp 495 (574)
.....++..+.+.+.+. .|.
T Consensus 204 a~~i~A~AaaSNllt~~-~G~ 223 (241)
T PF11299_consen 204 ADQILAFAAASNLLTSV-TGL 223 (241)
T ss_pred HHHHHHHHHHHHHHHHH-HHH
Confidence 66666666665555554 444
No 304
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=22.10 E-value=8.4e+02 Score=24.75 Aligned_cols=16 Identities=13% Similarity=0.218 Sum_probs=7.9
Q ss_pred hhhchhHHHHHHHHHh
Q 008210 347 AVVKADFWLLFLVYFA 362 (574)
Q Consensus 347 ~l~~~~~~~~~~~~~~ 362 (574)
.+|+|--|.-+++...
T Consensus 126 fL~~ry~~~~~~gv~i 141 (334)
T PF06027_consen 126 FLKRRYSWFHILGVLI 141 (334)
T ss_pred HHHhhhhHHHHHHHHH
Confidence 4455555555444433
No 305
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=20.87 E-value=1.9e+02 Score=25.65 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=23.6
Q ss_pred hhhHHHHHHhhcCccchhhhhhhhhhhhhhHHH
Q 008210 459 FSIMIPTVSELFGLEHFGLISNFLALGNPLAAF 491 (574)
Q Consensus 459 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 491 (574)
..+.+.+++..+.++.-|...|+-.+-.+++-+
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 345566778888888888888887766666543
Done!