BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008212
(573 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 236/607 (38%), Positives = 338/607 (55%), Gaps = 54/607 (8%)
Query: 1 MGKTPGKWIKSLLLGKKSSKSNLKGRDILKSANREESLITSKVSVSESFTTPPLTEPPAL 60
MGK+ KW+K++LLGKK+SKS+ +D + + +E L+TSKV S+ +++ P+
Sbjct: 1 MGKS-TKWLKNVLLGKKTSKSSGS-KDKERVVSGKEVLVTSKVEESDV-----VSDLPSF 53
Query: 61 EISAPIAVDLQHGVAAA-------LLNDAV----NQSSTKEDGDALMTTNLSSQEVPDRI 109
E++ VD G+ + +D + +S+ ++ + +LS E RI
Sbjct: 54 EVAETNTVDRSGGMLETQNVGPEEISDDEIELPEGKSTDSQNVAPVQDHSLSDAE---RI 110
Query: 110 RHEEAATKAQAAFRGYLARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQAL 169
+ E AAT QAAFRGYLARRAF LKGIIRLQA+IRGHLVRRQAV TL ++GIV+ QA
Sbjct: 111 QREIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAF 170
Query: 170 ARGRRVRYSDIGIQVQKICSSGKFQGANCSLSGVNSSTSLVKLSKNAVIRKLLASSPSDK 229
ARGR +R SDIG+QV + C QG N + ++ + KL+ NA +KLLASSP
Sbjct: 171 ARGREIRKSDIGVQVYRKCRLQLLQG-NKLANPTDAYLGIKKLTANAFAQKLLASSPKVL 229
Query: 230 PLCLRYDPGEPNSAWLWLERWMKSRFWEPHYQLKRNVQSKSETKRGNSQTIENEKGMSKR 289
P+ YD PNS +WLE W S FW+P Q K+ + K + N +E E K+
Sbjct: 230 PVHA-YDTSNPNSNLIWLENWSASCFWKPVPQPKKTISRKPQ----NRLLVEAESAKPKK 284
Query: 290 NVRKSARTNIENSSSQFALESEKPKRNPRKVSSHLVD-SVQEHAQSDIEKVKRNTRKVPN 348
+VRK +N E+SS Q + E EKPKR+ RKVSS ++ E Q ++EKVKR+ RKV N
Sbjct: 285 SVRKVPASNFESSSVQTSFEFEKPKRSFRKVSSQSIEPPAVEDPQIELEKVKRSLRKVHN 344
Query: 349 SVKEA------SERLEVDNEKPKRSLKKASTSAPPDV--SVQFTGDSVDKSTDTTVSVAK 400
V E+ S R EV EKPK ++K S+ P V + + + D+ +S
Sbjct: 345 PVVESSIQPQRSPRKEV--EKPKLGVEKTRESSYPLVHETAEEPVNVCDEKKKQEISEQP 402
Query: 401 QSDV---DTNLKLPEVVSTVDELLDHPASDLQPAESDGKIENIKEAAKDI--------NS 449
+ +V + + P + T +E LD + + +E KD N+
Sbjct: 403 EEEVHALEMEVHTPGPLET-NEALDSSLVNQIDSNEKAMVEEKPSMEKDTKEEKTPKPNN 461
Query: 450 TDDQISNDNQKASQRRSSLPAKIDVQE-NGLHST-PKVPSYMAPTESAKAKLRGQGSPRL 507
++ +NQK S+++ S +K + +E NG H T P +PSYM T+SAKAKLR QGSP+
Sbjct: 462 KENSAGKENQK-SRKKGSATSKTEREESNGHHETSPSIPSYMQATKSAKAKLRLQGSPKS 520
Query: 508 A-HDGIDKNGTTRRHSLPSSTSSKLSSLSPRVPRLVQTAGKGVVRADRSLTSSRDGGDKV 566
A DG +K RRHSLPS + +++S SPR RL + K + ++ L SSR+G K
Sbjct: 521 AEQDGTEKATVPRRHSLPSPGNGRITSHSPRTTRLANSGDKTGNKKEKPLLSSREGNAKT 580
Query: 567 IQAEWRR 573
AE +R
Sbjct: 581 TPAERKR 587
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 180/396 (45%), Gaps = 54/396 (13%)
Query: 61 EISAPIAVD---LQHGVAAALLNDAVNQSSTKEDGDALMTTNLSSQEVPDRIRHEEAATK 117
E+ P A D ++ V + + + + E D ++ S ++V +++ E
Sbjct: 162 ELQGPSAADAAKIEEDVTSEVEMASKVEPEESESDDVIIVRKESDEKVDEKL-DESVIVV 220
Query: 118 AQAAFRGYLARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGRRVRY 177
QAA RG+LARR K +I+LQA +RGHLVR QA+ +LRC+ IVK QA+ R R
Sbjct: 221 IQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHS-- 278
Query: 178 SDIGIQVQKICSSGKFQGANCSLSGVNSSTSLVKLSKNAVIRKLLASSPSDKPLCLRYDP 237
G A S N++ KL +N + L+ S+P KP+ ++ DP
Sbjct: 279 ----------TKDGSRVSATSDKSEPNAAAQ--KLLENKFAKHLMESTPKTKPINIKCDP 326
Query: 238 GEPNSAWLWLERWMKSRFWEPHYQLKRNVQSKSETKRGNSQTIENEKGMSKRNVRKSART 297
+P+SAW WLERWM +P K N+ T E + +NV+ S +
Sbjct: 327 TKPSSAWNWLERWMS--VPKPEKTSKANL------------TTEEQNLEETQNVKISPQA 372
Query: 298 NIENSSS--QFALESEKPKRNPRKVSSHLVD--SVQEHAQSD-----IEKVKRNTRKVPN 348
+ NS S + E++ P KV V+ ++ +Q D E + + P
Sbjct: 373 DFVNSDSTVENKTETDMPSYEASKVEGQNVELSETEKMSQYDSPEASAEVYYDSIQSQPL 432
Query: 349 SVKEAS--ERLEVDNEKPKRSLKKASTSAPPDVSVQFTGDSVDKST--DTTVSVAKQSDV 404
+ K S E E + + K SLK+ S P ++ Q + + ST + ++++ + DV
Sbjct: 433 AAKPDSLLEEPEYVDGQIKHSLKR-KVSNPSFIAAQSKFEELTSSTGSNKAMTLSSKDDV 491
Query: 405 -----DTNLKLPEVVSTVDELLDHPASDLQPAESDG 435
T++ P+ +T+ DH D+ PAE G
Sbjct: 492 LGEEGKTDIDSPDTTNTIK---DHSLEDVTPAELSG 524
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 485 VPSYMAPTESAKAKLRGQGSPRLAHDGIDKN--GTTRRHSLPSSTSSKLSSLSPRVPRLV 542
+P +M PT+SAKAK++ SPR + D +++ +RHSLP T+ K +SPR+ R
Sbjct: 723 LPRFMQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGVTNGK--QVSPRIQRSA 780
Query: 543 QTAGKGV 549
A +G
Sbjct: 781 SQAQQGT 787
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 111/239 (46%), Gaps = 41/239 (17%)
Query: 110 RHEEAATKAQAAFRGYLARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQAL 169
+ E AA Q+ FRG+LARR + ++G RL+ ++ G +V+RQA ITL+C+ + + Q+
Sbjct: 106 KEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQ 165
Query: 170 ARGRRVRYSDIG-------IQVQKICSSGKFQGANCSLSGVNSSTSLVK---LSK-NAVI 218
R RR+R S+ +Q G G N + S N S V+ L K A +
Sbjct: 166 IRSRRIRMSEENQARHKQLLQKHAKELGGLKNGGNWNYS--NQSKEQVEAGMLHKYEATM 223
Query: 219 RK-------------LLASSPSDKPLCLRYDPGEPNSAWLWLERWMKSRFWEPHYQLKR- 264
R+ L + S + P+ + DP P W WLERWM R WE + +
Sbjct: 224 RRERALAYAFTHQQNLKSFSKTANPMFM--DPSNPTWGWSWLERWMAGRPWESSEKEQNT 281
Query: 265 ----NVQSKSETKRGNSQTIENEKGMSKRNVRKSARTNIENSSSQFALESEKPKRNPRK 319
N K+ T R NSQ E K ++ + S + N ++SS RNPRK
Sbjct: 282 TNNDNSSVKNSTNR-NSQGGETAKSSNRNKLNSSTKPNTPSASSTAT-------RNPRK 332
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 53/73 (72%)
Query: 114 AATKAQAAFRGYLARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQALARGR 173
+ATK Q AFRGY+AR++FR LKG++RLQ V+RG+ V+RQ + ++ + +V+ Q+ + R
Sbjct: 324 SATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSR 383
Query: 174 RVRYSDIGIQVQK 186
R++ + QV+K
Sbjct: 384 RIKMLENQAQVEK 396
Score = 36.6 bits (83), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 476 ENGLHSTPKVPSYMAPTESAKAKLRGQGSPR 506
++ L S P PSYMAPT SAKAK+R +P+
Sbjct: 556 DDSLTSCPPFPSYMAPTVSAKAKVRPNSNPK 586
>sp|Q99MZ6|MYO7B_MOUSE Unconventional myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=3
Length = 2113
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 107 DRIRHEEAATKAQAAFRGYLARRAFR-TLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVK 165
+ +R AA QA +RGY R+ F+ L G RLQA+ R HL+ RQ + IV+
Sbjct: 782 EFLRQRRAAVTLQAGWRGYSQRKNFKLILVGFERLQAIARSHLLMRQFQAMRQ---RIVQ 838
Query: 166 FQALARGRRVR 176
QA RG VR
Sbjct: 839 LQARCRGYLVR 849
>sp|Q9QY06|MYO9B_MOUSE Unconventional myosin-IXb OS=Mus musculus GN=Myo9b PE=1 SV=2
Length = 2114
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 113 EAATKAQAAFRGYLARRAFRTLK-GIIRLQAVIRGHLVRR 151
+AA QAA+RGYL R+A+ + IIRLQ++ RGHL RR
Sbjct: 1003 QAAVYLQAAWRGYLQRQAYHHQRHSIIRLQSLCRGHLQRR 1042
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 109 IRHEEAATKAQAAFRGYLARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQA 168
++ + AA QA +R Y RRA + + LQA RG+L +RQA R I++ Q+
Sbjct: 977 VQMKHAALTIQACWRSYRVRRALERTQAAVYLQAAWRGYL-QRQAYHHQRH--SIIRLQS 1033
Query: 169 LARGRRVRYS 178
L RG R S
Sbjct: 1034 LCRGHLQRRS 1043
>sp|Q63358|MYO9B_RAT Unconventional myosin-IXb OS=Rattus norvegicus GN=Myo9b PE=1 SV=1
Length = 1980
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 114 AATKAQAAFRGYLARRAFRTLK-GIIRLQAVIRGHLVRR 151
AA QAA+RGYL R+A+ + IIRLQ++ RGHL RR
Sbjct: 1005 AAVYLQAAWRGYLQRQAYHHQRHSIIRLQSLCRGHLQRR 1043
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 109 IRHEEAATKAQAAFRGYLARRAFRTLKGIIRLQAVIRGHLVRRQAVITLRCLLGIVKFQA 168
++ + AA QA +R Y RR + + LQA RG+L +RQA R I++ Q+
Sbjct: 978 VQMKHAALTIQACWRSYRVRRTLERTRAAVYLQAAWRGYL-QRQAYHHQRH--SIIRLQS 1034
Query: 169 LARG--RRVRYSDIGIQVQKICSSGKFQGANCS 199
L RG +R +S + ++ QK + + GA S
Sbjct: 1035 LCRGHLQRRSFSQMMLEKQKAEQARETAGAEMS 1067
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.125 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,383,243
Number of Sequences: 539616
Number of extensions: 7805722
Number of successful extensions: 26638
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 521
Number of HSP's that attempted gapping in prelim test: 25886
Number of HSP's gapped (non-prelim): 1215
length of query: 573
length of database: 191,569,459
effective HSP length: 123
effective length of query: 450
effective length of database: 125,196,691
effective search space: 56338510950
effective search space used: 56338510950
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)