Your job contains 1 sequence.
>008218
MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL
IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA
QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM
ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTAT
ANTASQGSANDAANNNLTLHQARLQAAAVAASVYGKSYVYPSPNTLVWSPGYVVLPQANR
PLGDYTSVELGQEQASAGQPQQFVNPGGSATFSFPQFPQSVFVPFQTPDANLIGGERLPS
TQNTPVSQLEAQRKFIENQIEVLQNQLQLLQKSKPEGNVETILQCHQVAKERQLHLHLFL
HQTLGAMGKTKKLVHSFVTIVVSVGDSKKFRYR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008218
(573 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093422 - symbol:Hrd1A "homolog of yeast Hrd1"... 1602 7.1e-167 2
TAIR|locus:2014993 - symbol:Hrd1B "homolog of yeast Hrd1"... 1564 7.3e-165 2
UNIPROTKB|Q86TM6 - symbol:SYVN1 "E3 ubiquitin-protein lig... 741 5.9e-76 2
UNIPROTKB|E2RSJ2 - symbol:SYVN1 "Uncharacterized protein"... 740 9.6e-76 2
UNIPROTKB|E1BAK9 - symbol:SYVN1 "Uncharacterized protein"... 741 1.6e-75 2
UNIPROTKB|I3LGG8 - symbol:SYVN1 "Uncharacterized protein"... 732 6.7e-75 2
MGI|MGI:1921376 - symbol:Syvn1 "synovial apoptosis inhibi... 740 2.8e-73 1
UNIPROTKB|Q5XHH7 - symbol:syvn1-b "E3 ubiquitin-protein l... 718 4.1e-73 2
UNIPROTKB|Q6NRL6 - symbol:syvn1-a "E3 ubiquitin-protein l... 717 6.7e-73 2
ZFIN|ZDB-GENE-030131-7166 - symbol:syvn1 "synovial apopto... 734 1.2e-72 1
FB|FBgn0039875 - symbol:sip3 "septin interacting protein ... 693 2.9e-70 2
WB|WBGene00004768 - symbol:sel-11 species:6239 "Caenorhab... 691 4.4e-68 1
ASPGD|ASPL0000044630 - symbol:AN1488 species:162425 "Emer... 396 6.5e-64 3
DICTYBASE|DDB_G0287847 - symbol:DDB_G0287847 "putative E3... 467 2.9e-62 2
UNIPROTKB|E9PMA1 - symbol:SYVN1 "E3 ubiquitin-protein lig... 515 2.0e-49 1
GENEDB_PFALCIPARUM|PF14_0215 - symbol:PF14_0215 "hypothet... 447 3.2e-42 1
UNIPROTKB|Q8ILM8 - symbol:PF14_0215 "Putative uncharacter... 447 3.2e-42 1
DICTYBASE|DDB_G0279345 - symbol:amfr "putative E3 ubiquit... 396 5.7e-41 3
POMBASE|SPBC17D11.02c - symbol:hrd1 "ubiquitin-protein li... 342 2.0e-40 2
ZFIN|ZDB-GENE-040426-2190 - symbol:amfr "autocrine motili... 393 1.7e-38 2
UNIPROTKB|Q9UKV5 - symbol:AMFR "E3 ubiquitin-protein liga... 375 4.4e-34 2
UNIPROTKB|F1NBB7 - symbol:AMFR "Uncharacterized protein" ... 377 1.3e-33 1
MGI|MGI:1345634 - symbol:Amfr "autocrine motility factor ... 371 2.6e-33 2
UNIPROTKB|F1MWZ9 - symbol:AMFR "Uncharacterized protein" ... 373 1.6e-32 1
UNIPROTKB|F1PK72 - symbol:AMFR "Uncharacterized protein" ... 362 2.1e-31 1
RGD|1311551 - symbol:Amfr "autocrine motility factor rece... 322 1.3e-26 2
TAIR|locus:2122674 - symbol:RIN2 "RPM1 interacting protei... 216 4.6e-22 3
CGD|CAL0001749 - symbol:orf19.719 species:5476 "Candida a... 132 4.5e-17 3
SGD|S000005373 - symbol:HRD1 "Ubiquitin-protein ligase" s... 148 1.4e-16 2
UNIPROTKB|H3BRK9 - symbol:AMFR "E3 ubiquitin-protein liga... 212 1.8e-16 1
UNIPROTKB|H3BSK3 - symbol:AMFR "E3 ubiquitin-protein liga... 174 2.3e-12 1
MGI|MGI:1921565 - symbol:Rnf145 "ring finger protein 145"... 179 2.8e-10 1
UNIPROTKB|A8WWR3 - symbol:hrdl-1 "E3 ubiquitin-protein li... 183 3.1e-10 2
TAIR|locus:2185088 - symbol:AT5G01960 species:3702 "Arabi... 173 5.7e-10 1
UNIPROTKB|F1RR35 - symbol:RNF145 "Uncharacterized protein... 175 6.8e-10 1
TAIR|locus:4515102991 - symbol:AT2G44581 "AT2G44581" spec... 151 7.0e-10 1
FB|FBgn0039668 - symbol:Trc8 "Trc8" species:7227 "Drosoph... 180 7.4e-10 2
WB|WBGene00009164 - symbol:hrdl-1 species:6239 "Caenorhab... 174 7.6e-10 1
UNIPROTKB|P90859 - symbol:hrdl-1 "E3 ubiquitin-protein li... 174 7.6e-10 1
UNIPROTKB|E1C258 - symbol:RNF145 "Uncharacterized protein... 175 7.7e-10 1
UNIPROTKB|E3M334 - symbol:Cre-hrdl-1 "CRE-HRDL-1 protein"... 174 4.0e-09 2
UNIPROTKB|Q96MT1 - symbol:RNF145 "RING finger protein 145... 168 4.5e-09 1
UNIPROTKB|E7EW26 - symbol:RNF145 "RING finger protein 145... 168 4.6e-09 1
ZFIN|ZDB-GENE-030131-5264 - symbol:rnf145b "ring finger p... 167 6.0e-09 1
UNIPROTKB|F1PJJ1 - symbol:RNF145 "Uncharacterized protein... 167 6.1e-09 1
UNIPROTKB|F1MGV3 - symbol:RNF145 "Uncharacterized protein... 167 6.3e-09 1
UNIPROTKB|J9NTM9 - symbol:RNF145 "Uncharacterized protein... 167 7.1e-09 1
UNIPROTKB|H3BQM3 - symbol:AMFR "E3 ubiquitin-protein liga... 141 8.4e-09 1
TAIR|locus:4010713708 - symbol:AT2G44578 "AT2G44578" spec... 139 1.4e-08 1
RGD|1306670 - symbol:Rnf139 "ring finger protein 139" spe... 131 1.0e-07 1
UNIPROTKB|F1NPF1 - symbol:RNF139 "Uncharacterized protein... 154 1.3e-07 1
UNIPROTKB|F1RRQ2 - symbol:F1RRQ2 "Uncharacterized protein... 150 3.7e-07 1
TAIR|locus:2092895 - symbol:AT3G13430 species:3702 "Arabi... 145 3.7e-07 1
UNIPROTKB|I3LM12 - symbol:RNF139 "Uncharacterized protein... 150 4.1e-07 1
MGI|MGI:1923091 - symbol:Rnf139 "ring finger protein 139"... 150 4.2e-07 1
TAIR|locus:2117622 - symbol:RHA3B "RING-H2 finger A3B" sp... 136 4.3e-07 1
UNIPROTKB|J9P149 - symbol:RNF139 "Uncharacterized protein... 148 6.8e-07 1
UNIPROTKB|Q86Y13 - symbol:DZIP3 "E3 ubiquitin-protein lig... 151 7.0e-07 1
WB|WBGene00022471 - symbol:Y119C1B.5 species:6239 "Caenor... 148 8.0e-07 1
TAIR|locus:2093335 - symbol:AT3G30460 species:3702 "Arabi... 122 9.3e-07 1
TAIR|locus:2053863 - symbol:RHA3A "RING-H2 finger A3A" sp... 130 1.0e-06 1
TAIR|locus:1006230395 - symbol:AT4G24015 "AT4G24015" spec... 126 1.0e-06 1
TAIR|locus:2058465 - symbol:RHC1A "RING-H2 finger C1A" sp... 141 1.1e-06 1
UNIPROTKB|E1BP63 - symbol:RNF139 "Uncharacterized protein... 146 1.1e-06 1
FB|FBgn0039150 - symbol:CG13605 species:7227 "Drosophila ... 145 1.5e-06 1
TAIR|locus:2059793 - symbol:XERICO species:3702 "Arabidop... 120 1.5e-06 1
ZFIN|ZDB-GENE-040426-1024 - symbol:rnf181 "ring finger pr... 120 1.5e-06 1
WB|WBGene00022502 - symbol:ZC13.1 species:6239 "Caenorhab... 141 1.7e-06 1
UNIPROTKB|Q8WU17 - symbol:RNF139 "E3 ubiquitin-protein li... 144 1.9e-06 1
FB|FBgn0026878 - symbol:CG4325 species:7227 "Drosophila m... 117 3.2e-06 1
TAIR|locus:1009023242 - symbol:AT3G60966 "AT3G60966" spec... 117 3.2e-06 1
TAIR|locus:2038766 - symbol:RHA2B "RING-H2 finger protein... 116 4.1e-06 1
ZFIN|ZDB-GENE-080401-4 - symbol:rnf139 "ring finger prote... 140 5.1e-06 1
TAIR|locus:2120963 - symbol:AT4G38140 species:3702 "Arabi... 112 1.1e-05 1
DICTYBASE|DDB_G0267718 - symbol:DDB_G0267718 species:4468... 136 1.2e-05 1
POMBASE|SPAP32A8.03c - symbol:SPAP32A8.03c "ubiquitin-pro... 135 1.2e-05 1
ZFIN|ZDB-GENE-120215-234 - symbol:si:ch211-155d24.7 "si:c... 127 1.3e-05 1
TAIR|locus:2053776 - symbol:AT2G42350 species:3702 "Arabi... 112 1.4e-05 2
TAIR|locus:2122348 - symbol:AT4G09100 species:3702 "Arabi... 111 1.4e-05 1
TAIR|locus:2034934 - symbol:AT1G18770 species:3702 "Arabi... 111 1.4e-05 1
TAIR|locus:2124695 - symbol:AT4G10150 species:3702 "Arabi... 126 2.3e-05 1
TAIR|locus:2124700 - symbol:AT4G10160 species:3702 "Arabi... 125 2.4e-05 1
TAIR|locus:2139044 - symbol:AT4G12190 species:3702 "Arabi... 108 3.0e-05 1
TAIR|locus:2102569 - symbol:RZF1 "AT3G56580" species:3702... 128 3.1e-05 1
RGD|1594062 - symbol:Rnf13 "ring finger protein 13" speci... 129 3.4e-05 1
MGI|MGI:1346341 - symbol:Rnf13 "ring finger protein 13" s... 129 3.4e-05 1
POMBASE|SPBC2A9.04c - symbol:san1 "sir antagonist" specie... 133 3.4e-05 1
MGI|MGI:2442859 - symbol:Rnft2 "ring finger protein, tran... 130 3.4e-05 1
RGD|1560195 - symbol:Rnft2 "ring finger protein, transmem... 130 3.5e-05 1
UNIPROTKB|J9P693 - symbol:RNFT2 "Uncharacterized protein"... 130 3.5e-05 1
ZFIN|ZDB-GENE-090313-3 - symbol:ttc3 "tetratricopeptide r... 135 3.7e-05 1
ZFIN|ZDB-GENE-070209-292 - symbol:rnf126 "ring finger pro... 127 3.7e-05 1
TAIR|locus:2131463 - symbol:AT4G26400 species:3702 "Arabi... 128 3.8e-05 1
TAIR|locus:2177866 - symbol:AT5G41430 species:3702 "Arabi... 114 4.1e-05 1
TAIR|locus:4010713762 - symbol:AT3G20395 species:3702 "Ar... 123 4.1e-05 1
TAIR|locus:2154729 - symbol:AT5G53910 species:3702 "Arabi... 123 4.6e-05 1
UNIPROTKB|I3LA46 - symbol:I3LA46 "Uncharacterized protein... 122 4.8e-05 1
RGD|1563278 - symbol:Dzip3 "DAZ interacting protein 3, zi... 134 4.9e-05 1
UNIPROTKB|F1PU33 - symbol:DZIP3 "Uncharacterized protein"... 134 4.9e-05 1
UNIPROTKB|F1SL40 - symbol:DZIP3 "Uncharacterized protein"... 133 5.1e-05 1
WARNING: Descriptions of 128 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2093422 [details] [associations]
symbol:Hrd1A "homolog of yeast Hrd1" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0008295 "spermidine biosynthetic
process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
EMBL:AB012247 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
HSSP:Q9LRB7 eggNOG:COG5243 HOGENOM:HOG000294196 KO:K10601
EMBL:DQ059113 EMBL:AK117158 IPI:IPI00546313 RefSeq:NP_188230.1
UniGene:At.38946 UniGene:At.75414 ProteinModelPortal:Q9LW77
SMR:Q9LW77 PaxDb:Q9LW77 PRIDE:Q9LW77 EnsemblPlants:AT3G16090.1
GeneID:820854 KEGG:ath:AT3G16090 TAIR:At3g16090 InParanoid:Q9LW77
OMA:MVALANS PhylomeDB:Q9LW77 ProtClustDB:CLSN2685297
Genevestigator:Q9LW77 Uniprot:Q9LW77
Length = 492
Score = 1602 (569.0 bits), Expect = 7.1e-167, Sum P(2) = 7.1e-167
Identities = 315/416 (75%), Positives = 354/416 (85%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M+RL+TYAG SFMATLAV+YHAF+SR QFYP+ VYLSTSKISLVLL+NM LV+M LW L
Sbjct: 1 MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
+K VFLGSLREAEVERLNEQ+ RE+MEILFAITIFRQDFS FL +V TLLLIKALHWLA
Sbjct: 61 VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
QKRVEYIETTP+V LSH RIVSFM FLLLVDSLF+YSS++ L+Q+RQASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
ILATTTV+IFVKYVFYV+DMLM+GQWE+K VYTFYLELIRDLLHLSMY+CFF VIFMNYG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
VPLHL+RELYETFRNF+IRV+DY+RYRKITSNMNDRFPDA+PEEL ASD+TCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300
Query: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQ-SGTA 359
AKKLICGHLFHVHCLRSWLERQ TCPTCRALVVPPEN S A GQR + HQ S
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAP---GQR-ELHQGSQQG 356
Query: 360 TANTASQGS--ANDA--ANNNLTLHQARLQXXXXXXXXXXXXXXXPSPNTLVWSPG 411
T+++ +QGS ++ A +NN+L+ H ARLQ PS NT+ WS G
Sbjct: 357 TSSSGNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSG 412
Score = 43 (20.2 bits), Expect = 7.1e-167, Sum P(2) = 7.1e-167
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 483 NTPVSQLEAQRKFIENQIEVXXXXXXXXXKSKPE 516
N ++LE RK +E +E+ KPE
Sbjct: 442 NMSETKLEEMRKSLETHLEILRNRLHFLETRKPE 475
>TAIR|locus:2014993 [details] [associations]
symbol:Hrd1B "homolog of yeast Hrd1" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IMP]
[GO:0006457 "protein folding" evidence=RCA] [GO:0008295 "spermidine
biosynthetic process" evidence=RCA] [GO:0009408 "response to heat"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0005886 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 HOGENOM:HOG000294196 KO:K10601 EMBL:BT010730
EMBL:AB189470 EMBL:AK228264 IPI:IPI00529648 RefSeq:NP_849843.3
UniGene:At.46831 ProteinModelPortal:Q6NPT7 SMR:Q6NPT7 PRIDE:Q6NPT7
EnsemblPlants:AT1G65040.2 GeneID:842812 KEGG:ath:AT1G65040
TAIR:At1g65040 OMA:ASENMSR ProtClustDB:CLSN2918918
Genevestigator:Q6NPT7 Uniprot:Q6NPT7
Length = 460
Score = 1564 (555.6 bits), Expect = 7.3e-165, Sum P(2) = 7.3e-165
Identities = 297/419 (70%), Positives = 352/419 (84%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M++L+ YAG S +ATL V+YHAF+SR QFYP+ VYLSTSKI+LV+L+NMGLV+M LW L
Sbjct: 1 MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
+K VFLGSLREAEVERLNEQ+ RE+MEILFAITIFRQDFSV F+++V TLLLIK LHW+A
Sbjct: 61 VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
QKRVEYIETTP+V LLSH+RIVSFM FLL++D L YSS++ L+Q+R+AS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
ILATTTVSI VKY FYV+DML EGQWE K VYTFYLEL+RDLLHLSMYLCFFL+IFMNYG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
+PLHLIRELYETFRNF+IRV DY+RYRKITSNMNDRFPDA+PEEL ++D+TCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300
Query: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTAT 360
+AKKL+CGHLFHVHCLRSWLERQ+TCPTCRALVVP EN STA G ++ Q GT T
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360
Query: 361 ANTASQGSA-NDAANNNLTLHQARLQXXXXXXXXXXXXXXXPSP-NTLVWSPGYVVLPQ 417
+++ QGS+ + AA+ N++ H+AR Q PS NTLVWS G +LPQ
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ 419
Score = 62 (26.9 bits), Expect = 7.3e-165, Sum P(2) = 7.3e-165
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 485 PVSQLEAQRKFIENQIEV 502
P +++EAQR+F+E+QIEV
Sbjct: 418 PQTEVEAQRRFLESQIEV 435
>UNIPROTKB|Q86TM6 [details] [associations]
symbol:SYVN1 "E3 ubiquitin-protein ligase synoviolin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;IDA] [GO:0016881
"acid-amino acid ligase activity" evidence=IDA] [GO:0018279
"protein N-linked glycosylation via asparagine" evidence=IMP]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0030968 "endoplasmic
reticulum unfolded protein response" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 EMBL:AB085847 Prosite:PS00518 GO:GO:0016021
GO:GO:0005634 Reactome:REACT_116125 GO:GO:0006987 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 GO:GO:0016881 eggNOG:COG5243 HOGENOM:HOG000294196
KO:K10601 CTD:84447 HOVERGEN:HBG094015 EMBL:AB024690 EMBL:AF317634
EMBL:AB058713 EMBL:AL834262 EMBL:BC030530 IPI:IPI00166996
IPI:IPI00172510 IPI:IPI00396584 RefSeq:NP_115807.1
RefSeq:NP_757385.1 UniGene:Hs.75859 ProteinModelPortal:Q86TM6
SMR:Q86TM6 IntAct:Q86TM6 MINT:MINT-4052103 STRING:Q86TM6
PhosphoSite:Q86TM6 DMDM:134035039 PaxDb:Q86TM6 PRIDE:Q86TM6
DNASU:84447 Ensembl:ENST00000294256 Ensembl:ENST00000307289
Ensembl:ENST00000377190 Ensembl:ENST00000526060 GeneID:84447
KEGG:hsa:84447 UCSC:uc001odb.3 UCSC:uc001odc.3 UCSC:uc009yqc.3
GeneCards:GC11M064894 HGNC:HGNC:20738 HPA:HPA005480 HPA:HPA024300
MIM:608046 neXtProt:NX_Q86TM6 PharmGKB:PA128394735
InParanoid:Q86TM6 ChiTaRS:SYVN1 GenomeRNAi:84447 NextBio:74217
ArrayExpress:Q86TM6 Bgee:Q86TM6 CleanEx:HS_SYVN1
Genevestigator:Q86TM6 Uniprot:Q86TM6
Length = 617
Score = 741 (265.9 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 153/359 (42%), Positives = 210/359 (58%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M R S T AVV HA+ + QFYP++VYL+ S S+ +L V++ +L ++
Sbjct: 1 MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
+ KVF G LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA
Sbjct: 61 MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
+ RV+++E +P + L H RIVS M L ++D LF+ + +L TR ASV L F FEY
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 179
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
IL T ++IF+KYV + D+ E W+ KAVY Y EL + + +Y+ F ++ +
Sbjct: 180 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 239
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
PL IR +Y R F+ V D + R+ NMN +PDA+PEEL A D+ CIICREEM
Sbjct: 240 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 299
Query: 301 T-AKKLICGHLFHVHCLRSWLERQHTCPTCRALVV----PPENGASTAGVQHGQRPDTH 354
T AK+L C H+FH CLRSW +RQ TCPTCR V+ P ++ G P H
Sbjct: 300 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPH 358
Score = 43 (20.2 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 327 PTCRALVVPPENGASTAGVQHGQRPDTHQ--SGTATANTAS---QGSANDA 372
P+ V PP A+ G T S TA + TAS GSA +A
Sbjct: 398 PSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEA 448
Score = 39 (18.8 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 335 PPENGASTAGVQHGQRPDTHQSGTATANTASQGSANDAA 373
PP +G + A + SG AT TA+ SA A+
Sbjct: 397 PPSSGEAVAPPSTSAAALSRPSGAATT-TAAGTSATAAS 434
>UNIPROTKB|E2RSJ2 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 OMA:RTPTVNS EMBL:AAEX03011641
Ensembl:ENSCAFT00000022084 Uniprot:E2RSJ2
Length = 776
Score = 740 (265.6 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 148/331 (44%), Positives = 202/331 (61%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M R S T AVV HA+ + QFYP++VYL+ S S+ +L V++ +L ++
Sbjct: 166 MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 225
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
+ KVF G LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA
Sbjct: 226 MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 285
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
+ RV+++E +P + L H RIVS M L ++D LF+ + +L TR ASV L F FEY
Sbjct: 286 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 344
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
IL T ++IF+KYV + D+ E W+ KAVY Y EL + + +Y+ F ++ +
Sbjct: 345 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 404
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
PL IR +Y R F+ V D + R+ NMN +PDA+PEEL A D+ CIICREEM
Sbjct: 405 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 464
Query: 301 T-AKKLICGHLFHVHCLRSWLERQHTCPTCR 330
T AK+L C H+FH CLRSW +RQ TCPTCR
Sbjct: 465 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 495
Score = 42 (19.8 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 335 PPENGASTAGVQHGQRPDTHQSGTATANTASQGSAN 370
PP +G A + +G AT AS SA+
Sbjct: 562 PPSSGEPVAPPSTSAAALSRPNGAATTTAASAASAS 597
>UNIPROTKB|E1BAK9 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 OMA:NIHHYLS EMBL:DAAA02063552
IPI:IPI00688216 PRIDE:E1BAK9 Ensembl:ENSBTAT00000006699
Uniprot:E1BAK9
Length = 611
Score = 741 (265.9 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 153/359 (42%), Positives = 210/359 (58%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M R S T AVV HA+ + QFYP++VYL+ S S+ +L V++ +L ++
Sbjct: 1 MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
+ KVF G LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA
Sbjct: 61 MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
+ RV+++E +P + L H RIVS M L ++D LF+ + +L TR ASV L F FEY
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 179
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
IL T ++IF+KYV + D+ E W+ KAVY Y EL + + +Y+ F ++ +
Sbjct: 180 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 239
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
PL IR +Y R F+ V D + R+ NMN +PDA+PEEL A D+ CIICREEM
Sbjct: 240 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 299
Query: 301 T-AKKLICGHLFHVHCLRSWLERQHTCPTCRALVV----PPENGASTAGVQHGQRPDTH 354
T AK+L C H+FH CLRSW +RQ TCPTCR V+ P ++ G P H
Sbjct: 300 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAPH 358
Score = 39 (18.8 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 335 PPENGASTAGVQHGQRPDTHQSGTATANTASQGSAN 370
PP +G + A + +G AT A+ SA+
Sbjct: 397 PPGSGEAVAPPSTSAAALSRPNGAATTTAATAASAS 432
>UNIPROTKB|I3LGG8 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 KO:K10601 OMA:NIHHYLS CTD:84447
EMBL:CU457406 RefSeq:XP_003122589.1 UniGene:Ssc.53723
Ensembl:ENSSSCT00000027683 GeneID:100514334 KEGG:ssc:100514334
Uniprot:I3LGG8
Length = 610
Score = 732 (262.7 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 147/331 (44%), Positives = 201/331 (60%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M R S T AVV HA+ + QFYP++VYL+ S S+ +L V++ +L ++
Sbjct: 1 MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
+ KVF G LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA
Sbjct: 61 MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
+ RV+++E +P + L H RIVS M L ++D LF+ + +L TR ASV L F FEY
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 179
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
IL T ++IF+KYV + D+ E W+ KAVY Y EL + + +Y+ F ++ +
Sbjct: 180 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 239
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
PL IR +Y R F+ V D + R+ NMN +PDA+ EEL A D+ CIICREEM
Sbjct: 240 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMV 299
Query: 301 T-AKKLICGHLFHVHCLRSWLERQHTCPTCR 330
T AK+L C H+FH CLRSW +RQ TCPTCR
Sbjct: 300 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330
Score = 42 (19.8 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 333 VVPPENGASTAGVQHGQRPDTHQSGTATANTASQGSA 369
V PP + A + SG AT AS SA
Sbjct: 394 VPPPPSSGEAAAPPSTSAALSRPSGAATTTAASPASA 430
>MGI|MGI:1921376 [details] [associations]
symbol:Syvn1 "synovial apoptosis inhibitor 1, synoviolin"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0006986 "response to unfolded protein" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=ISO] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISO] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1921376 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 GO:GO:0005634 GO:GO:0043066
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 GO:GO:0004842 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0000151 GO:GO:0006986
HOGENOM:HOG000294196 KO:K10601 CTD:84447 HOVERGEN:HBG094015
ChiTaRS:SYVN1 EMBL:AK122558 EMBL:AK004688 EMBL:BC042199
EMBL:BC046829 EMBL:BC057917 EMBL:BC080722 IPI:IPI00387479
IPI:IPI01008384 RefSeq:NP_001158181.1 RefSeq:NP_083045.4
UniGene:Mm.149870 ProteinModelPortal:Q9DBY1 SMR:Q9DBY1
IntAct:Q9DBY1 MINT:MINT-1662447 STRING:Q9DBY1 PhosphoSite:Q9DBY1
PaxDb:Q9DBY1 PRIDE:Q9DBY1 Ensembl:ENSMUST00000134667
Ensembl:ENSMUST00000138532 GeneID:74126 KEGG:mmu:74126
UCSC:uc008ggm.2 InParanoid:Q9DBY1 NextBio:339846 Bgee:Q9DBY1
CleanEx:MM_SYVN1 Genevestigator:Q9DBY1 Uniprot:Q9DBY1
Length = 612
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 153/359 (42%), Positives = 210/359 (58%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M R S T AVV HA+ + QFYP++VYL+ S S+ +L V++ +L ++
Sbjct: 1 MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
+ KVF G LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA
Sbjct: 61 MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
+ RV+++E +P + L H RIVS M L ++D LF+ + +L TR ASV L F FEY
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 179
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
IL T ++IF+KYV + D+ E W+ KAVY Y EL + + +Y+ F ++ +
Sbjct: 180 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 239
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
PL IR +Y R F+ V D + R+ NMN +PDA+PEEL A D+ CIICREEM
Sbjct: 240 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAVDNVCIICREEMV 299
Query: 301 T-AKKLICGHLFHVHCLRSWLERQHTCPTCRALVV----PPENGASTAGVQHGQRPDTH 354
T AK+L C H+FH CLRSW +RQ TCPTCR V+ P ++ G P H
Sbjct: 300 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPH 358
>UNIPROTKB|Q5XHH7 [details] [associations]
symbol:syvn1-b "E3 ubiquitin-protein ligase synoviolin B"
species:8355 "Xenopus laevis" [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 KO:K10601 HOVERGEN:HBG094015 EMBL:BC084080
RefSeq:NP_001088172.1 UniGene:Xl.64351 ProteinModelPortal:Q5XHH7
GeneID:494996 KEGG:xla:494996 CTD:494996 Xenbase:XB-GENE-6254740
Uniprot:Q5XHH7
Length = 595
Score = 718 (257.8 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 140/323 (43%), Positives = 199/323 (61%)
Query: 9 GFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGS 68
G S T +VV HA+ + QFYP++VYL+ S S+ +L V++ +L + + KVF G
Sbjct: 3 GASLALTASVVAHAYYLKNQFYPTVVYLTKSSPSMAILYIQAFVLVFLLGKFMGKVFFGQ 62
Query: 69 LREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIE 128
LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA+ RV+++E
Sbjct: 63 LRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFME 122
Query: 129 TTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVS 188
+P + L H RI++ M L ++D+ F+ + L+ TR ASV L F FEY IL T ++
Sbjct: 123 RSPNISWLFHFRILALMLLLGVLDAFFVSHAYNSLV-TRGASVQLVFGFEYAILMTMILA 181
Query: 189 IFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRE 248
+F+KY+ + D+ E W+ KAVY Y EL + + +Y+ F ++ + PL IR
Sbjct: 182 VFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMVKVHTFPLFAIRP 241
Query: 249 LYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTT-AKKLIC 307
+Y R F+ V D V R+ NMN +PDA+ EEL A D+ CIICREEM + AK+L C
Sbjct: 242 MYLAMRQFKKAVTDAVMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVSGAKRLPC 301
Query: 308 GHLFHVHCLRSWLERQHTCPTCR 330
H+FH CLRSW +RQ TCPTCR
Sbjct: 302 NHIFHTSCLRSWFQRQQTCPTCR 324
Score = 39 (18.8 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 421 PLGDYTSVELGQEQASAGQPQQFVNPGGSA 450
P+G + V G A G P NPG S+
Sbjct: 380 PMGQFPPVP-G---APVGNPPDEANPGSSS 405
Score = 38 (18.4 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 344 GVQHGQRPDTHQSGTATANTASQGSANDAANNN 376
G G PD G+++ ++A G ++ + +
Sbjct: 389 GAPVGNPPDEANPGSSSGSSARAGETSNVGSES 421
>UNIPROTKB|Q6NRL6 [details] [associations]
symbol:syvn1-a "E3 ubiquitin-protein ligase synoviolin A"
species:8355 "Xenopus laevis" [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 KO:K10601 HOVERGEN:HBG094015 EMBL:BC070731
RefSeq:NP_001084825.1 UniGene:Xl.18945 ProteinModelPortal:Q6NRL6
GeneID:431869 KEGG:xla:431869 CTD:431869 Xenbase:XB-GENE-1005365
Uniprot:Q6NRL6
Length = 605
Score = 717 (257.5 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 141/323 (43%), Positives = 197/323 (60%)
Query: 9 GFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGS 68
G S T AVV HA+ + QFYP++VYL+ S S+ +L V++ +L + + KVF G
Sbjct: 3 GASLALTAAVVAHAYYLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQ 62
Query: 69 LREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIE 128
LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA+ RV+++E
Sbjct: 63 LRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFME 122
Query: 129 TTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVS 188
+P + L H RI++ M L ++D+ F+ S L R ASV L F FEY IL T ++
Sbjct: 123 RSPNISWLFHFRILALMLLLGVLDAFFV-SHAYHSLVIRGASVQLVFGFEYAILMTVILT 181
Query: 189 IFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRE 248
+F+KY+ + D+ E W+ KAVY Y EL + + +Y+ F ++ + PL IR
Sbjct: 182 VFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYVAFMTIMVKVHTFPLFAIRP 241
Query: 249 LYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTT-AKKLIC 307
+Y R F+ V D + R+ NMN +PDA+ EEL A D+ CIICREEM T AK+L C
Sbjct: 242 MYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVTGAKRLPC 301
Query: 308 GHLFHVHCLRSWLERQHTCPTCR 330
H+FH CLRSW +RQ TCPTCR
Sbjct: 302 NHIFHTSCLRSWFQRQQTCPTCR 324
Score = 38 (18.4 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 421 PLGDYTSVELGQEQASAGQPQQFVNPGGSA 450
P+G + V G A G P NPG S+
Sbjct: 382 PMGPFPPVP-G---APGGNPPDEANPGSSS 407
>ZFIN|ZDB-GENE-030131-7166 [details] [associations]
symbol:syvn1 "synovial apoptosis inhibitor 1,
synoviolin" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISS] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-7166 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279 eggNOG:COG5243
HSSP:Q9H0F5 HOGENOM:HOG000294196 KO:K10601 EMBL:BC044465
EMBL:BC066677 IPI:IPI00498211 RefSeq:NP_997900.1 UniGene:Dr.75288
ProteinModelPortal:Q803I8 STRING:Q803I8 GeneID:335226
KEGG:dre:335226 CTD:84447 HOVERGEN:HBG094015 InParanoid:Q803I8
NextBio:20810730 ArrayExpress:Q803I8 Uniprot:Q803I8
Length = 625
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 147/352 (41%), Positives = 208/352 (59%)
Query: 1 MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL 60
M+R S T AVV HA+ + QFYP++VYL+ S S+ +L V++ +L +L
Sbjct: 1 MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL 60
Query: 61 IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA 120
++KVF G LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA
Sbjct: 61 MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120
Query: 121 QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
+ RV+++E +P + + H R++S M L ++D LF+ + ++ TR ASV L F FEY
Sbjct: 121 EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII-TRGASVQLVFGFEYA 179
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240
IL T ++ F+KY + D+ E W+ KAVY Y EL + + +Y+ F ++ +
Sbjct: 180 ILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 239
Query: 241 VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT 300
PL IR +Y R F+ V D + R+ NMN +PDA+PE+L A+D+ CIICREEM
Sbjct: 240 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV 299
Query: 301 T-AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRP 351
T AKKL C H+FH CLRSW +RQ TCPTCR V+ T Q P
Sbjct: 300 TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPPAAQAP 351
>FB|FBgn0039875 [details] [associations]
symbol:sip3 "septin interacting protein 3" species:7227
"Drosophila melanogaster" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IGI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005783 EMBL:AE014297 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 eggNOG:COG5243 GO:GO:0030968
GeneTree:ENSGT00530000062938 KO:K10601 EMBL:AY060677
RefSeq:NP_651894.3 UniGene:Dm.1395 ProteinModelPortal:Q95SP2
SMR:Q95SP2 MINT:MINT-990774 STRING:Q95SP2 PaxDb:Q95SP2 PRIDE:Q95SP2
EnsemblMetazoa:FBtr0085842 EnsemblMetazoa:FBtr0330113 GeneID:43747
KEGG:dme:Dmel_CG1937 FlyBase:FBgn0039875 InParanoid:Q95SP2
OMA:RTPTVNS OrthoDB:EOG4NK9B2 PhylomeDB:Q95SP2 ChiTaRS:sip3
GenomeRNAi:43747 NextBio:835578 Bgee:Q95SP2 Uniprot:Q95SP2
Length = 626
Score = 693 (249.0 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 136/335 (40%), Positives = 208/335 (62%)
Query: 15 TLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEV 74
T AV+ A+ ++QFYP++VY++ S S+ ++ VI+ + +L+ K+FLG+LR AE
Sbjct: 13 TSAVIGFAYYQKQQFYPAVVYITKSNASMGVIYIQFFVIVFMFGKLLSKIFLGTLRAAEF 72
Query: 75 ERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVP 134
E L E+ + E A T+FR DF+ F+A+ T LL +K+ HWLA++RV+++E +P +
Sbjct: 73 EHLLERFWYALTETCLAFTVFRDDFNPRFVALFTVLLFLKSFHWLAEERVDFMERSPVLG 132
Query: 135 LLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYV 194
L HIR+ S ++ L ++D + L + L R +V L F FEY IL T S +KYV
Sbjct: 133 WLFHIRVGSLLTVLGILDYVLLIHAYNSTL-VRGPTVQLVFGFEYAILLTVIASTAIKYV 191
Query: 195 FYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYETFR 254
+ ++M + WE KAV+ Y EL+ L+ + +Y+ F +++ Y +P+ + R ++ T R
Sbjct: 192 LHAAEMRTDTPWENKAVFLLYTELVIGLIKVVLYILFVVIMAKIYALPMFVFRPMFFTIR 251
Query: 255 NFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTT-AKKLICGHLFHV 313
NFR + D + R+ NMN +PDA+PEEL SD+ CIICRE+M +KKL CGH+FH
Sbjct: 252 NFRKALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLPCGHIFHT 311
Query: 314 HCLRSWLERQHTCPTCRALVVPPENGASTAGVQHG 348
CLRSW +RQ TCPTCR ++ STA + G
Sbjct: 312 TCLRSWFQRQQTCPTCRLNILRTPTVNSTAMPRQG 346
Score = 37 (18.1 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 478 LPSTQNTPVSQLEAQR 493
+PST T ++QLE +
Sbjct: 527 MPSTSATAMAQLETHQ 542
>WB|WBGene00004768 [details] [associations]
symbol:sel-11 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0008593 "regulation of Notch
signaling pathway" evidence=IGI] [GO:0035264 "multicellular
organism growth" evidence=IGI] [GO:0010468 "regulation of gene
expression" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0035264 HSSP:Q9LRB7 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0010468 GO:GO:0008593
EMBL:Z72511 PIR:T22687 RefSeq:NP_505969.1 ProteinModelPortal:Q20798
SMR:Q20798 DIP:DIP-26690N IntAct:Q20798 MINT:MINT-212290
STRING:Q20798 PaxDb:Q20798 EnsemblMetazoa:F55A11.3.1
EnsemblMetazoa:F55A11.3.2 GeneID:179612 KEGG:cel:CELE_F55A11.3
UCSC:F55A11.3 CTD:179612 WormBase:F55A11.3 HOGENOM:HOG000294196
InParanoid:Q20798 KO:K10601 OMA:NIHHYLS NextBio:906150
Uniprot:Q20798
Length = 610
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 137/339 (40%), Positives = 201/339 (59%)
Query: 9 GFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGS 68
G S +AT A + +AF +QFYPS+VYLS S S+ ++ G+V++ +++QL+K + G
Sbjct: 10 GGSCVATAATILNAFLINKQFYPSIVYLSKSNASMAVIYVQGIVLVYLMFQLLKSILFGD 69
Query: 69 LREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIE 128
LR AE E L+E++ ++E A T+FR DFS F+ LL IK HWLA RV+ +E
Sbjct: 70 LRAAEAEHLSERTWHAVLETCLAFTVFRDDFSAIFVMQFIGLLFIKCFHWLADDRVDMME 129
Query: 129 TTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVS 188
+P + L H+R+++ ++ L DS F+ SS F TR AS + F FEY IL +
Sbjct: 130 RSPVITLRFHLRMMTVLAALGFADSYFV-SSAYFTTITRGASAQIVFGFEYAILLALVLH 188
Query: 189 IFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRE 248
+ +KY+ ++ D+ W+ KAVY Y EL +L+ +Y F +V+ + PL +R
Sbjct: 189 VTIKYLLHMHDLRNPQSWDNKAVYLLYAELFINLIRCLLYGFFAVVMLRVHTFPLFSVRP 248
Query: 249 LYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT---TAKKL 305
Y++ R D + R+ + MN +FP S E+L A D+TCIICREEMT + K+L
Sbjct: 249 FYQSVRALHKAFLDVILSRRAINAMNSQFPVVSAEDLAAMDATCIICREEMTVDASPKRL 308
Query: 306 ICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAG 344
C H+FH HCLRSW +RQ TCPTCR + NGA+ G
Sbjct: 309 PCSHVFHAHCLRSWFQRQQTCPTCRTDIWQGRNGAAAGG 347
>ASPGD|ASPL0000044630 [details] [associations]
symbol:AN1488 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0010620 "negative regulation of
transcription by transcription factor catabolism" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 EMBL:BN001307 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5243 EMBL:AACD01000022 KO:K10601
OrthoDB:EOG4W3WW9 RefSeq:XP_659092.1 ProteinModelPortal:Q5BD92
EnsemblFungi:CADANIAT00008111 GeneID:2875340 KEGG:ani:AN1488.2
HOGENOM:HOG000157817 OMA:GWIGEGR Uniprot:Q5BD92
Length = 775
Score = 396 (144.5 bits), Expect = 6.5e-64, Sum P(3) = 6.5e-64
Identities = 77/160 (48%), Positives = 99/160 (61%)
Query: 206 WERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVR 265
WE K + FYL+L+ D L L++YL FF ++F YG+P+H++R++ T R+F R+ D+ R
Sbjct: 257 WEEKGRWVFYLDLLTDFLKLTVYLTFFAILFTFYGLPIHILRDVVVTIRSFGRRIMDFAR 316
Query: 266 YRKITSNMNDRFPDASPEELDASDSTCIICREEMT----------------TAKKLICGH 309
YR T +MNDR+PDAS EE+ A + CIICREEMT KKL CGH
Sbjct: 317 YRNATRDMNDRYPDASAEEV-AREEVCIICREEMTHWQPGDRPVSRVSERLRPKKLPCGH 375
Query: 310 LFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQ 349
+ H CLRSWLERQ CPTCR V+ P AGV GQ
Sbjct: 376 ILHFSCLRSWLERQQNCPTCRRPVIAPPRNQGPAGVNMGQ 415
Score = 264 (98.0 bits), Expect = 6.5e-64, Sum P(3) = 6.5e-64
Identities = 64/210 (30%), Positives = 107/210 (50%)
Query: 2 MRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLI 61
MR YAG S V A + R FY + VYLS S +L++L N+ L+ + L +
Sbjct: 1 MRFAAYAGASVALATGVFLKALHQRANFYSACVYLSQSSANLMILTNVCLLAVGFLLFWL 60
Query: 62 KKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQ 121
+++ G LR E E+L E++ + E A+TIFR + FL M +LL+ K W+ +
Sbjct: 61 QRLLYGPLRPIETEQLYEKAWFAVTETCLAMTIFRGELGAWFLVMFVSLLVGKVWGWIGE 120
Query: 122 KRVEYIETTPTV-PLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM 180
RVE++E P PLL H R+V + ++ D L + +L+ + + + F FE+
Sbjct: 121 GRVEFLEQQPPANPLLFHTRLVVSLLLSVMFDIFMLKYCIDTVLEQARPDMMVMFGFEFA 180
Query: 181 ILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
+L + S +Y + ++ + Q + KA
Sbjct: 181 VLTILSTSTAARYSISLVEIYINRQ-QMKA 209
Score = 46 (21.3 bits), Expect = 6.5e-64, Sum P(3) = 6.5e-64
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 413 VVLPQANR-PLGDYTSVELGQEQASAGQPQQFVNPG 447
V+ P N+ P G V +GQ AGQ QQ + PG
Sbjct: 399 VIAPPRNQGPAG----VNMGQGNGGAGQ-QQNMPPG 429
Score = 41 (19.5 bits), Expect = 2.2e-63, Sum P(3) = 2.2e-63
Identities = 18/89 (20%), Positives = 30/89 (33%)
Query: 403 PNTLVWSPGYVVLPQANRPLGDYTSVELGQEQASAGQPQQFVNPGGSAXXXXXXXXXXXX 462
P+ L G+ ++P + G S + AS+ + + P
Sbjct: 618 PDGLTLPQGWTLVPLHSVQPGLSASSNVAAN-ASSSEAEHSAPPSEGMLNSQVPTDTESQ 676
Query: 463 XXXXXXDANLIGGERLPSTQNTPVSQLEA 491
DA G LP+ Q++P S A
Sbjct: 677 RPSDRSDAATSGSSGLPNWQSSPFSHSAA 705
>DICTYBASE|DDB_G0287847 [details] [associations]
symbol:DDB_G0287847 "putative E3 ubiquitin-protein
ligase" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0287847 GO:GO:0046872 GO:GO:0008270
EMBL:AAFI02000104 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5243 KO:K10601 RefSeq:XP_637096.1
ProteinModelPortal:Q54JQ6 EnsemblProtists:DDB0187676 GeneID:8626351
KEGG:ddi:DDB_G0287847 InParanoid:Q54JQ6 OMA:ETIPHIN
ProtClustDB:CLSZ2846663 Uniprot:Q54JQ6
Length = 688
Score = 467 (169.5 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 84/210 (40%), Positives = 134/210 (63%)
Query: 125 EYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILAT 184
+++E +P ++++ + ++ LL D +FLY +V L + + + FS EY +L
Sbjct: 104 QFLEHSP-YDFKKNVKLFTLLTILLFFDLIFLYFAVNSLFE-HGINAMMLFSLEYGLLLV 161
Query: 185 TTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLH 244
+ +S + + + + EG+W++K +Y YLE + + MY FF+V ++ +P+H
Sbjct: 162 SVISTIISFFINIEGIKREGRWDQKGLYILYLEFFSEGIKTLMYAMFFVVSLIHIALPIH 221
Query: 245 LIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKK 304
+IR+L+ +FR F R D ++Y+ I MN+RF DA+ EEL+ SD CI+CRE+MT+ KK
Sbjct: 222 IIRQLFISFRTFYRRFQDLLQYQSI---MNERFQDATDEELENSDKICIVCREDMTSGKK 278
Query: 305 LICGHLFHVHCLRSWLERQHTCPTCRALVV 334
L CGH+ H+HCLRSWLERQ TCP CRALV+
Sbjct: 279 LPCGHILHLHCLRSWLERQQTCPICRALVI 308
Score = 191 (72.3 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 38/106 (35%), Positives = 67/106 (63%)
Query: 1 MMRLQ--TYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILW 58
M+RL Y + T V+YHA + QFYP+ VYL+T+K +L+++ N +V+ ++
Sbjct: 1 MIRLTFPLYCQVTVALTALVIYHAHSKYDQFYPTGVYLATAKHALLIITNFAIVMAYLIG 60
Query: 59 QLIKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFL 104
+L+ K+FL + E E++ LN++ + I + + A+TIFR+ F+ FL
Sbjct: 61 KLVIKIFLEKVHERELDLLNDRLKTSITDTILALTIFREHFNAQFL 106
>UNIPROTKB|E9PMA1 [details] [associations]
symbol:SYVN1 "E3 ubiquitin-protein ligase synoviolin"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] GO:GO:0001701 EMBL:AP003068
HGNC:HGNC:20738 ChiTaRS:SYVN1 IPI:IPI00983790
Ensembl:ENST00000531018 ArrayExpress:E9PMA1 Bgee:E9PMA1
Uniprot:E9PMA1
Length = 236
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 104/235 (44%), Positives = 142/235 (60%)
Query: 63 KVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQK 122
KVF G LR AE+E L E+S + E A T+FR DFS F+A+ T LL +K HWLA+
Sbjct: 3 KVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAED 62
Query: 123 RVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMIL 182
RV+++E +P + L H RIVS M L ++D LF+ + +L TR ASV L F FEY IL
Sbjct: 63 RVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYAIL 121
Query: 183 ATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVP 242
T ++IF+KYV + D+ E W+ KAVY Y EL + + +Y+ F ++ + P
Sbjct: 122 MTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFP 181
Query: 243 LHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICRE 297
L IR +Y R F+ V D + R+ NMN +PDA+PEEL A D+ CIICRE
Sbjct: 182 LFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICRE 236
>GENEDB_PFALCIPARUM|PF14_0215 [details] [associations]
symbol:PF14_0215 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 109/347 (31%), Positives = 191/347 (55%)
Query: 2 MRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLI 61
+ ++ Y S + ++ +AF +FY ++VYLST K ++ N L++ +L +L+
Sbjct: 3 LNMRLYILLSHLGLAFILMYAFMKYDEFYLAVVYLSTEKFPRTIIYNFFLMVFIVLCKLL 62
Query: 62 KKVFLGSLREAEVERLNEQSRREIME-ILFAI----TIFRQDFS-VSFLAMVTTLLLIKA 115
VF+G LR EVE+L + +R IM+ ILF + TI ++ S + + ++ ++++KA
Sbjct: 63 LNVFIGELRYLEVEQLIDNARAFIMDTILFLVLSKPTINGKEVSSIILIKYLSIIVILKA 122
Query: 116 LHWLAQKRVEYI-ET-TPTVPLLSHIRIVSFMSFLLLVD-SLFLYSSVKFLLQTRQASVS 172
H + RV I E P +L +++ FM L + + SLF Y L + +++
Sbjct: 123 YHLVLYSRVSNIFELGVPRTRVL--VKLFIFMCLLSIANLSLFTYFYKNSL---KNSTMY 177
Query: 173 LFFSFEYM-ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCF 231
L+ FE + I + +SI K+ V D+ + KA F+L+++ D++ L ++L F
Sbjct: 178 LWLFFECLSIFESCQISI-CKFFVNVIDLRSQNGLSSKATILFFLDILHDIMSLIIFLVF 236
Query: 232 FLVIFMNY--GVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASD 289
LV +N +PLH+ ++ + R + +YR++T N+ +F +A+ EEL +
Sbjct: 237 ILVFVLNNFSNLPLHMTADIIHVVKTLISRFKSFQKYRELTKNIETKFANATEEELKEA- 295
Query: 290 STCIICREEMTT-AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVP 335
TCIICR+++ +KKL C H+FHV CL+SW +Q TCP CR + P
Sbjct: 296 GTCIICRDDLKEGSKKLSCSHIFHVDCLKSWFIQQQTCPICRTEIKP 342
>UNIPROTKB|Q8ILM8 [details] [associations]
symbol:PF14_0215 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 109/347 (31%), Positives = 191/347 (55%)
Query: 2 MRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLI 61
+ ++ Y S + ++ +AF +FY ++VYLST K ++ N L++ +L +L+
Sbjct: 3 LNMRLYILLSHLGLAFILMYAFMKYDEFYLAVVYLSTEKFPRTIIYNFFLMVFIVLCKLL 62
Query: 62 KKVFLGSLREAEVERLNEQSRREIME-ILFAI----TIFRQDFS-VSFLAMVTTLLLIKA 115
VF+G LR EVE+L + +R IM+ ILF + TI ++ S + + ++ ++++KA
Sbjct: 63 LNVFIGELRYLEVEQLIDNARAFIMDTILFLVLSKPTINGKEVSSIILIKYLSIIVILKA 122
Query: 116 LHWLAQKRVEYI-ET-TPTVPLLSHIRIVSFMSFLLLVD-SLFLYSSVKFLLQTRQASVS 172
H + RV I E P +L +++ FM L + + SLF Y L + +++
Sbjct: 123 YHLVLYSRVSNIFELGVPRTRVL--VKLFIFMCLLSIANLSLFTYFYKNSL---KNSTMY 177
Query: 173 LFFSFEYM-ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCF 231
L+ FE + I + +SI K+ V D+ + KA F+L+++ D++ L ++L F
Sbjct: 178 LWLFFECLSIFESCQISI-CKFFVNVIDLRSQNGLSSKATILFFLDILHDIMSLIIFLVF 236
Query: 232 FLVIFMNY--GVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASD 289
LV +N +PLH+ ++ + R + +YR++T N+ +F +A+ EEL +
Sbjct: 237 ILVFVLNNFSNLPLHMTADIIHVVKTLISRFKSFQKYRELTKNIETKFANATEEELKEA- 295
Query: 290 STCIICREEMTT-AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVP 335
TCIICR+++ +KKL C H+FHV CL+SW +Q TCP CR + P
Sbjct: 296 GTCIICRDDLKEGSKKLSCSHIFHVDCLKSWFIQQQTCPICRTEIKP 342
>DICTYBASE|DDB_G0279345 [details] [associations]
symbol:amfr "putative E3 ubiquitin-protein ligase"
species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR026608 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0279345 GenomeReviews:CM000152_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
eggNOG:COG5243 KO:K10636 PANTHER:PTHR12477:SF4 EMBL:AAFI02000030
ProtClustDB:CLSZ2846663 RefSeq:XP_641804.1
ProteinModelPortal:Q54WX3 EnsemblProtists:DDB0237524 GeneID:8622001
KEGG:ddi:DDB_G0279345 InParanoid:Q54WX3 OMA:LPNTHAK Uniprot:Q54WX3
Length = 679
Score = 396 (144.5 bits), Expect = 5.7e-41, Sum P(3) = 5.7e-41
Identities = 95/349 (27%), Positives = 174/349 (49%)
Query: 41 ISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFS 100
I+LV+++N ++ + + I+ +F G LR+ E N++ ++ L I ++
Sbjct: 53 INLVIIINTIFTLLIVFGKFIQYLFFGQLRDIEARNFNDRLWTYVVSKLIFIFAAKEPEL 112
Query: 101 VSFLAM---VTTLLLIKALHWLAQKRVEYIET-TPTVPLLSHIRIVSFMSFLLLVDSLFL 156
S L + L +K L++ R +Y+ T P H++++ + +L+ D ++
Sbjct: 113 GSLLVWGFWFSILCCLKLFSLLSRDRFDYLNTFLPNTHAKIHLKLLMLLVGILISDLIWF 172
Query: 157 YSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYL 216
Y S+ + +++ L +FE + TV +KY ++ D+ E W+++ Y +Y
Sbjct: 173 YFSITYFFGEGLSNLMLL-NFECFTIFFETVQTLIKYSIHLFDLSSEDVWDKRGQYIYYT 231
Query: 217 ELIRDLLHLSMYLCFFLVIFMNYG-VP--LHLIRELY--ETFRNFRIRVADYVRYRKITS 271
E D + L+ + I + G P LH++ Y F N ++ Y Y K+TS
Sbjct: 232 EFSTDSVILAGTCAHLIHIIIIQGFTPTLLHVVMFFYFKMVFGNLNRKITAYRNYCKLTS 291
Query: 272 NMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+M++ +P+ ++L+ + C ICR+ M TAKKL CGH+FH CLR+WLE+ H+CPTCR
Sbjct: 292 DMDNCYPNVGEKDLENYNDDCAICRDRMVTAKKLPCGHIFHHSCLRAWLEQHHSCPTCRR 351
Query: 332 LVVPPE------NGASTAGVQHGQRPDTHQSGTATANTASQGSANDAAN 374
++ NG +TA + SG T T + G+ + +A+
Sbjct: 352 SLIDEHQHHLGNNGTATATIAGA-------SGVTTTTTINGGTGSTSAS 393
Score = 46 (21.3 bits), Expect = 5.7e-41, Sum P(3) = 5.7e-41
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 476 ERLPSTQNTPVSQLEAQRK-FIENQIE 501
ER S Q S LEA RK F+E E
Sbjct: 649 ERYTSLQQRKKSMLEASRKQFLETMSE 675
Score = 38 (18.4 bits), Expect = 5.7e-41, Sum P(3) = 5.7e-41
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 352 DTHQSGTATANTASQGSANDAANNN 376
D ++ + + S GS N+ NNN
Sbjct: 542 DPNKKDQSMDGSGSSGSNNNKNNNN 566
Score = 38 (18.4 bits), Expect = 5.7e-41, Sum P(3) = 5.7e-41
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 341 STAGVQHGQR--PD--THQSGTATANTASQGSANDAANNN 376
ST G G+ P TH + + GS + +NNN
Sbjct: 522 STNGTDSGEAMSPSKQTHFKDPNKKDQSMDGSGSSGSNNN 561
>POMBASE|SPBC17D11.02c [details] [associations]
symbol:hrd1 "ubiquitin-protein ligase Hrd1, synviolin
family" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISO] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISM] [GO:0010620 "negative
regulation of transcription by transcription factor catabolism"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IMP]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 PomBase:SPBC17D11.02c Prosite:PS00518
GO:GO:0016021 GO:GO:0005938 GO:GO:0005789 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842
eggNOG:COG5243 HSSP:Q9H0F5 InterPro:IPR024766 Pfam:PF12678
KO:K10601 PIR:T39713 RefSeq:NP_596376.1 ProteinModelPortal:O74757
STRING:O74757 EnsemblFungi:SPBC17D11.02c.1 GeneID:2539900
KEGG:spo:SPBC17D11.02c OMA:LISHIRI OrthoDB:EOG4W3WW9
NextBio:20801045 GO:GO:0010620 Uniprot:O74757
Length = 677
Score = 342 (125.4 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 84/288 (29%), Positives = 147/288 (51%)
Query: 16 LAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVE 75
L+V+ ++S Y + V +S S + + + +N+ L + + +K + GSL+ E+E
Sbjct: 16 LSVLLSLYSSAN-VYSATVMISQSPVHITIGLNVCLCLFFAIANALKTLLFGSLQTFELE 74
Query: 76 RLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIE---TTPT 132
L EQ + EI+ AIT+FR+ S+SF +++TL+ + H + R E ++ T
Sbjct: 75 LLYEQFWITLTEIMLAITVFREAISISFFMLLSTLMFARVFHSICSFRTERLQIQLTDQR 134
Query: 133 VPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVK 192
+ S + F+ +L ++L + + L S + F E+ +L K
Sbjct: 135 FHIFSRLTCAYFVLSILDASLIYLCFTSEHL---GDKSTRMLFVCEFSVLLLNLTIEASK 191
Query: 193 YVFYVSDML-MEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYE 251
Y+ + ++ W+ K+ Y F LE+ RD L L Y F+ F VP++ IR++Y
Sbjct: 192 LCIYLYEARHLDQVWDEKSTYLFRLEVCRDGLRLLAYSLLFMYQFPYVSVPIYSIRQMYT 251
Query: 252 TFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEM 299
F + R+ ++ R+R+ T +MN +P A+ E+L SD TC ICREEM
Sbjct: 252 CFYSLFRRIREHARFRQATRDMNAMYPTATEEQLTNSDRTCTICREEM 299
Score = 153 (58.9 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 34/85 (40%), Positives = 42/85 (49%)
Query: 278 PDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
PD PE D + + R T K+L CGH+ H HCLR+WLERQ TCP CR V+
Sbjct: 302 PDHPPENTDEMEP---LPRGLDMTPKRLPCGHILHFHCLRNWLERQQTCPICRRSVIG-- 356
Query: 338 NGASTAGVQHGQRPDTHQSGTATAN 362
N +S G+ Q T N
Sbjct: 357 NQSSPTGIPASPNVRATQIATQVPN 381
Score = 38 (18.4 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 349 QRPDTHQSGTATANTASQGSANDAANN 375
+R T+ T+T N ++ + D +N+
Sbjct: 449 RRIPTYSQSTSTTNPSATPTTGDPSNS 475
>ZFIN|ZDB-GENE-040426-2190 [details] [associations]
symbol:amfr "autocrine motility factor receptor"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 ZFIN:ZDB-GENE-040426-2190 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 CTD:267 eggNOG:COG5243 HOGENOM:HOG000037436
HOVERGEN:HBG044694 KO:K10636 OrthoDB:EOG4DJJW8
PANTHER:PTHR12477:SF4 EMBL:BC057411 IPI:IPI00488003
RefSeq:NP_998328.1 UniGene:Dr.13893 ProteinModelPortal:Q6PFU8
SMR:Q6PFU8 STRING:Q6PFU8 GeneID:406442 KEGG:dre:406442
InParanoid:Q6PFU8 NextBio:20818037 ArrayExpress:Q6PFU8
Uniprot:Q6PFU8
Length = 620
Score = 393 (143.4 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 101/358 (28%), Positives = 184/358 (51%)
Query: 33 MVYLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIM-EILF- 90
+++L T + + +++N I+ ++ ++I+ + G LR +E + L ++ I + +F
Sbjct: 67 LLHLITDSLFVWVMVNTACCILMLIGKVIQCIVFGPLRVSEKQHLKDKFWNFIFYKFIFI 126
Query: 91 --AITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFM-SF 147
+ + R + V + + L+ + + L + R EY+ +PT P+ SH+R+++ + S
Sbjct: 127 FGVLNVQRVEEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLALLVSV 186
Query: 148 LLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWE 207
L L + ++ + +V+ F + E +++ T + ++Y ++ D+ EG WE
Sbjct: 187 LSCCGGLAVLCALAGHIHGMH-TVA-FMAAECLLVTVRTGHVIIRYSIHLWDLNHEGTWE 244
Query: 208 RKAVYTFYLELIRDLLHLSMYLC--FFLVIFMNYGVP---LHLIRELYETFRNFRIRVAD 262
K+ Y +Y + I +L LS+ L +++F N + L + +L F + R+
Sbjct: 245 NKSSYIYYTDFIMELAILSLDLMHHIHMLLFGNIWLSMASLVIFMQLRHLFHEVQRRIRR 304
Query: 263 YVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLER 322
+ Y ++ NM RF A+PEEL A++ C IC + MTTA+KL CGHLFH CLRSWLE+
Sbjct: 305 HKNYLRVIDNMESRFAVATPEELAANNDDCAICWDSMTTARKLPCGHLFHNSCLRSWLEQ 364
Query: 323 QHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTASQGSANDAANNNLTLH 380
+CPTCR + E + GQR N A+ G+A+ A+ N H
Sbjct: 365 DTSCPTCRMSLNIHEGRRER---EEGQREPLED------NMAAAGAADARAHINQHNH 413
Score = 43 (20.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 4 LQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLI 61
LQTY S + V A+++ R S + + L N+G V +L LI
Sbjct: 14 LQTYTALSALLLAGTVLSAYSTVRDSEFSSALSEGPQNEELKLENLGNVATGVLLHLI 71
>UNIPROTKB|Q9UKV5 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IMP;IDA] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=IDA]
[GO:0004872 "receptor activity" evidence=IPI] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP;IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=IDA] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0006928 "cellular component movement" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0051259 GO:GO:0005634
GO:GO:0046872 GO:GO:0007568 GO:GO:0043025 GO:GO:0030425
GO:GO:0008270 GO:GO:0004872 GO:GO:0006928 GO:GO:0030426
GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 EMBL:AF124145 EMBL:BC069197 EMBL:L35233
EMBL:M63175 IPI:IPI00423874 IPI:IPI00435690 PIR:A39877
RefSeq:NP_001135.3 UniGene:Hs.295137 UniGene:Hs.593157 PDB:2EJS
PDB:2LVN PDB:2LVO PDB:2LVP PDB:2LVQ PDB:3FSH PDB:3H8K PDB:3TIW
PDB:4G3O PDBsum:2EJS PDBsum:2LVN PDBsum:2LVO PDBsum:2LVP
PDBsum:2LVQ PDBsum:3FSH PDBsum:3H8K PDBsum:3TIW PDBsum:4G3O
ProteinModelPortal:Q9UKV5 SMR:Q9UKV5 DIP:DIP-29060N IntAct:Q9UKV5
STRING:Q9UKV5 PhosphoSite:Q9UKV5 DMDM:113707 DMDM:34922250
PeptideAtlas:Q9UKV5 PRIDE:Q9UKV5 Ensembl:ENST00000290649 GeneID:267
KEGG:hsa:267 UCSC:uc002eiy.3 CTD:267 GeneCards:GC16M056395
HGNC:HGNC:463 HPA:CAB026381 MIM:603243 neXtProt:NX_Q9UKV5
PharmGKB:PA24768 eggNOG:COG5243 HOGENOM:HOG000037436
HOVERGEN:HBG044694 InParanoid:Q9UKV5 KO:K10636 OMA:YTDFIME
OrthoDB:EOG4DJJW8 PhylomeDB:Q9UKV5 ChiTaRS:AMFR
EvolutionaryTrace:Q9UKV5 GenomeRNAi:267 NextBio:1049
ArrayExpress:Q9UKV5 Bgee:Q9UKV5 CleanEx:HS_AMFR
Genevestigator:Q9UKV5 GermOnline:ENSG00000159461 GO:GO:0030968
GO:GO:0000209 PANTHER:PTHR12477:SF4 Uniprot:Q9UKV5
Length = 643
Score = 375 (137.1 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 89/305 (29%), Positives = 154/305 (50%)
Query: 35 YLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIM-EILFAIT 93
YL + + + +L+N ++ ++ +LI+ + G LR +E + L ++ I + +F
Sbjct: 76 YLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFG 135
Query: 94 IFR-QDFS--VSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLL 150
+ Q V + L+ + + L + R EY+ +PT P+ SH R++S + +LL
Sbjct: 136 VLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLL 195
Query: 151 VDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
L + T F + E +++ T + ++YV ++ D+ EG WE K
Sbjct: 196 -SCCGLAAVCSITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKG 254
Query: 211 VYTFYLELIRDLLHLSMYLC--FFLVIFMNYGVP---LHLIRELYETFRNFRIRVADYVR 265
Y +Y + + +L LS+ L +++F N + L + +L F + R+ +
Sbjct: 255 TYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKN 314
Query: 266 YRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHT 325
Y ++ NM RF A+PEEL ++ C IC + M A+KL CGHLFH CLRSWLE+ +
Sbjct: 315 YLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTS 374
Query: 326 CPTCR 330
CPTCR
Sbjct: 375 CPTCR 379
Score = 44 (20.5 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 4 LQTYAGFSFMATLAVVYHAFNSRRQ 28
L+TY G S +A L + A+ + Q
Sbjct: 14 LRTYTGLSGLALLGTIISAYRALSQ 38
>UNIPROTKB|F1NBB7 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=IEA]
[GO:0051259 "protein oligomerization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:AADN02051556 EMBL:AADN02051557 IPI:IPI00586421
Ensembl:ENSGALT00000004906 Uniprot:F1NBB7
Length = 559
Score = 377 (137.8 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 89/297 (29%), Positives = 155/297 (52%)
Query: 45 LLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIM--EILFAITIFR-QDFS- 100
+L+N ++ ++ +LI++V G LR +E + L ++ I + +F + Q
Sbjct: 1 VLVNTACCVLMLVAKLIQRVVFGPLRVSERQHLKDKFWNFIFFYKFIFIFGVLNVQTVEE 60
Query: 101 -VSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFM-SFLLLVDSLFLYS 158
V + + L+ + + L + R EY+ +PT P+ SHIR+++ + + LL L +
Sbjct: 61 VVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLTLLVAMLLSCCGLAVVC 120
Query: 159 SVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLEL 218
V + T F + E +++ T + ++YV ++ D+ EG WE K Y +Y +
Sbjct: 121 GV--IGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDF 178
Query: 219 IRDLLHLSMYLC--FFLVIFMNYGVP---LHLIRELYETFRNFRIRVADYVRYRKITSNM 273
+ +L LS+ L +++F N + L + +L F + R+ + Y ++ NM
Sbjct: 179 VMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNM 238
Query: 274 NDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
RF A+PEEL ++ C IC + M +A+KL CGHLFH CLRSWLE+ +CPTCR
Sbjct: 239 EARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCR 295
>MGI|MGI:1345634 [details] [associations]
symbol:Amfr "autocrine motility factor receptor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009987 "cellular process" evidence=TAS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0030426
"growth cone" evidence=ISO] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051259 "protein
oligomerization" evidence=ISO] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
UniPathway:UPA00143 MGI:MGI:1345634 Prosite:PS00518 GO:GO:0051259
GO:GO:0005634 GO:GO:0005887 GO:GO:0000166 GO:GO:0046872
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0008270
GO:GO:0030426 GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 CTD:267
eggNOG:COG5243 HOGENOM:HOG000037436 HOVERGEN:HBG044694 KO:K10636
OMA:YTDFIME OrthoDB:EOG4DJJW8 ChiTaRS:AMFR GO:GO:0030968
GO:GO:0000209 PANTHER:PTHR12477:SF4 EMBL:AF124144 EMBL:BC003256
EMBL:BC034538 EMBL:BC040338 IPI:IPI00319880 IPI:IPI00351315
RefSeq:NP_035917.2 UniGene:Mm.34641 UniGene:Mm.490390
UniGene:Mm.490433 ProteinModelPortal:Q9R049 SMR:Q9R049
IntAct:Q9R049 STRING:Q9R049 PhosphoSite:Q9R049 PaxDb:Q9R049
PRIDE:Q9R049 Ensembl:ENSMUST00000053766 GeneID:23802 KEGG:mmu:23802
GeneTree:ENSGT00530000062938 InParanoid:Q9R049 NextBio:303423
Bgee:Q9R049 CleanEx:MM_AMFR Genevestigator:Q9R049
GermOnline:ENSMUSG00000031751 Uniprot:Q9R049
Length = 643
Score = 371 (135.7 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 90/306 (29%), Positives = 155/306 (50%)
Query: 35 YLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIM-EILFAIT 93
YL + + + +L+N ++ ++ +LI+ + G LR +E + L ++ I + +F
Sbjct: 76 YLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFG 135
Query: 94 IFR-QDFS--VSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFM-SFLL 149
+ Q V + L+ + + L + R EY+ +PT P+ SH R++S + + LL
Sbjct: 136 VLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLL 195
Query: 150 LVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERK 209
L + V T F + E +++ T + ++YV ++ D+ EG WE K
Sbjct: 196 SCCGLAVVCCVTGY--THGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGK 253
Query: 210 AVYTFYLELIRDLLHLSMYLC--FFLVIFMNYGVP---LHLIRELYETFRNFRIRVADYV 264
Y +Y + + +L LS+ L +++F N + L + +L F + R+ +
Sbjct: 254 GTYVYYTDFVMELALLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHK 313
Query: 265 RYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQH 324
Y ++ NM RF A+PEEL ++ C IC + M A+KL CGHLFH CLRSWLE+
Sbjct: 314 NYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDT 373
Query: 325 TCPTCR 330
+CPTCR
Sbjct: 374 SCPTCR 379
Score = 44 (20.5 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 4 LQTYAGFSFMATLAVVYHAFNSRRQ 28
L+TY G S +A L + A+ + Q
Sbjct: 14 LRTYTGLSGLALLGTIVSAYRALSQ 38
>UNIPROTKB|F1MWZ9 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051259 "protein oligomerization" evidence=IEA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:DAAA02046496 EMBL:DAAA02046497 IPI:IPI00742613
Ensembl:ENSBTAT00000004952 Uniprot:F1MWZ9
Length = 646
Score = 373 (136.4 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 92/306 (30%), Positives = 155/306 (50%)
Query: 35 YLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIM-EILFAIT 93
YL + I + +L+N I+ ++ +LI+ + G LR +E + L ++ I + +F
Sbjct: 79 YLLSHCICVQVLVNTACCILMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFG 138
Query: 94 IFR-QDFS--VSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFM-SFLL 149
+ Q V + L+ + + L + R EY+ +PT P+ SH R++S + + LL
Sbjct: 139 VLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLL 198
Query: 150 LVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERK 209
L + V T F + E +++ T + ++YV ++ D+ EG WE K
Sbjct: 199 SCCGLAVVCCVTGY--THGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLSHEGTWEGK 256
Query: 210 AVYTFYLELIRDLLHLSMYLC--FFLVIFMNYGVP---LHLIRELYETFRNFRIRVADYV 264
Y +Y + + +L LS+ L +++F N + L + +L F + R+ +
Sbjct: 257 GTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHK 316
Query: 265 RYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQH 324
Y ++ NM RF A+PEEL ++ C IC + M A+KL CGHLFH CLRSWLE+
Sbjct: 317 NYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDT 376
Query: 325 TCPTCR 330
+CPTCR
Sbjct: 377 SCPTCR 382
>UNIPROTKB|F1PK72 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051259 "protein oligomerization"
evidence=IEA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:AAEX03001585 Ensembl:ENSCAFT00000014581 Uniprot:F1PK72
Length = 560
Score = 362 (132.5 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 88/296 (29%), Positives = 149/296 (50%)
Query: 45 LLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIM-EILFAITIFR-QDFS-- 100
+L+N ++ ++ +LI+ + G LR +E + L ++ I + +F + Q
Sbjct: 1 VLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEV 60
Query: 101 VSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFM-SFLLLVDSLFLYSS 159
V + L+ + + L + R EY+ PT P+ SH R++S + + LL L +
Sbjct: 61 VMWCLWFAGLVFLHLMVQLCKDRFEYVSFQPTTPMSSHGRVLSLLIAMLLSCCGLAVVCC 120
Query: 160 VKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELI 219
V T F + E +++ T + ++YV ++ D+ EG WE K Y +Y + +
Sbjct: 121 VTGY--THGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFV 178
Query: 220 RDLLHLSMYLC--FFLVIFMNYGVP---LHLIRELYETFRNFRIRVADYVRYRKITSNMN 274
+L LS+ L +++F N + L + +L F + R+ + Y ++ NM
Sbjct: 179 MELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNME 238
Query: 275 DRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
RF A+PEEL ++ C IC + M A+KL CGHLFH CLRSWLE+ +CPTCR
Sbjct: 239 ARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 294
>RGD|1311551 [details] [associations]
symbol:Amfr "autocrine motility factor receptor, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007568 "aging" evidence=IEP]
[GO:0007611 "learning or memory" evidence=IEP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030426 "growth cone" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=ISO] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
RGD:1311551 GO:GO:0051259 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0008270
GO:GO:0030426 GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 OrthoDB:EOG4DJJW8
GO:GO:0030968 GO:GO:0000209 PANTHER:PTHR12477:SF4
GeneTree:ENSGT00530000062938 IPI:IPI00365150 PRIDE:D4ADJ6
Ensembl:ENSRNOT00000026340 UCSC:RGD:1311551 Uniprot:D4ADJ6
Length = 643
Score = 322 (118.4 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 86/307 (28%), Positives = 152/307 (49%)
Query: 35 YLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREIM-EILFAIT 93
YL + + + +L+N ++ ++ +LI+ + G LR +E + L ++ I + +F
Sbjct: 76 YLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFG 135
Query: 94 IFR-QDFS--VSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFM-SFLL 149
+ Q V + L+ + + L + R EY+ +PT P+ SH R++S + + LL
Sbjct: 136 VLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLL 195
Query: 150 LVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERK 209
L + V T F + E +++ T + ++YV ++ D+ EG WE K
Sbjct: 196 SCCGLAVVCCVTGY--THGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGK 253
Query: 210 AVYTFYLELIRDLLHLS---MYLCFFLV---IFMNYGVPLHLIRELYETFRNFRIRVADY 263
Y +Y + + +L+ LS M+ LV ++++ G+ + + T V +
Sbjct: 254 GTYVYYTDFVMELMLLSLDLMHHIHMLVSGTVWISGGLDVMNVSLTGATVSAVSF-VLNS 312
Query: 264 VRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQ 323
+ + + N RF A+ EEL ++ C IC + M A+KL CGHLFH CLRSWLE+
Sbjct: 313 LGFLRTIKNKICRFAVATAEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQD 372
Query: 324 HTCPTCR 330
+CPTCR
Sbjct: 373 TSCPTCR 379
Score = 44 (20.5 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 4 LQTYAGFSFMATLAVVYHAFNSRRQ 28
L+TY G S +A L + A+ + Q
Sbjct: 14 LRTYTGLSGLALLGTIVSAYRALSQ 38
>TAIR|locus:2122674 [details] [associations]
symbol:RIN2 "RPM1 interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0034052 "positive
regulation of plant-type hypersensitive response" evidence=IGI]
InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL161563
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009626 GO:GO:0004842
eggNOG:COG5243 KO:K10636 EMBL:AL035396 EMBL:AY072178 EMBL:DQ677669
IPI:IPI00517898 RefSeq:NP_194253.2 RefSeq:NP_849552.1
UniGene:At.43259 ProteinModelPortal:Q8VYC8 SMR:Q8VYC8 STRING:Q8VYC8
EnsemblPlants:AT4G25230.1 EnsemblPlants:AT4G25230.2 GeneID:828626
KEGG:ath:AT4G25230 TAIR:At4g25230 HOGENOM:HOG000029409
InParanoid:Q8VYC8 OMA:WSLWPMN PhylomeDB:Q8VYC8
ProtClustDB:CLSN2689987 Genevestigator:Q8VYC8 GO:GO:0034052
Uniprot:Q8VYC8
Length = 578
Score = 216 (81.1 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 52/146 (35%), Positives = 74/146 (50%)
Query: 196 YVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYETFRN 255
++ M E K + L D+ L M L +L I+ +G+ HL+ + F N
Sbjct: 236 FIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVL--FLN 293
Query: 256 FRI-------RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICG 308
R R+ Y++ R ++ PDA+ EEL A D C ICRE M AK+L C
Sbjct: 294 IRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCN 353
Query: 309 HLFHVHCLRSWLERQ----HTCPTCR 330
HLFH+ CLRSWL++ ++CPTCR
Sbjct: 354 HLFHLGCLRSWLDQGLNEVYSCPTCR 379
Score = 118 (46.6 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 42/168 (25%), Positives = 79/168 (47%)
Query: 39 SKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVERLNEQSRREI------MEILFAI 92
S ++ LL N L + +L +K +F G L + E ++L E+ I + ++
Sbjct: 56 SYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANYIIYKGTFLPLVIPP 115
Query: 93 TIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLLVD 152
TIF+ V + +T L +K LA+ R+E + +P+ ++ R+ S + +L VD
Sbjct: 116 TIFQ---GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVLSVD 172
Query: 153 SLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDM 200
++ S+ T ++V L FE +A T+ + + F + DM
Sbjct: 173 MFWIKLSL-MTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLDM 219
Score = 39 (18.8 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 334 VPPENGASTAGV 345
VPP NG T G+
Sbjct: 512 VPPGNGGRTGGL 523
>CGD|CAL0001749 [details] [associations]
symbol:orf19.719 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0000838 "Hrd1p ubiquitin ligase ERAD-M
complex" evidence=IEA] [GO:0000839 "Hrd1p ubiquitin ligase ERAD-L
complex" evidence=IEA] [GO:0010620 "negative regulation of
transcription by transcription factor catabolism" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0031505 "fungal-type cell wall organization" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
CGD:CAL0001749 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5243 EMBL:AACQ01000135 KO:K10601
RefSeq:XP_713079.1 ProteinModelPortal:Q59U13 GeneID:3645277
KEGG:cal:CaO19.719 Uniprot:Q59U13
Length = 633
Score = 132 (51.5 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 206 WERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGV--PLHLIRELYETFRNFRIRVADY 263
WE K YT +++ +L YL F ++ ++ G+ PL +++ Y + R +
Sbjct: 301 WENKPYYTKGIDIASAVLTSISYLSFVYLLTIHSGLSLPLSMLQGTYSSMRRAWVETNQL 360
Query: 264 VRYRKITSNMNDRFPDASPEELDASDSTCIICREEM 299
+ + + + ++ + +AS E+L SDS CIICRE+M
Sbjct: 361 LAFIESSKRLDTQLANASAEDLSQSDSLCIICREDM 396
Score = 118 (46.6 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTA 343
KKL CGH+ H+ CL+ WLER +CP CR V +GA+ A
Sbjct: 417 KKLKCGHILHLGCLKEWLERSDSCPLCRRKVFS-NDGATNA 456
Score = 85 (35.0 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 43/215 (20%), Positives = 98/215 (45%)
Query: 3 RLQTYA-GFSFMATLAVVYHAFNSRRQFYPSMVYLS--TSKISLVLLMNMGLVIMCILWQ 59
+ Q Y G+S ++ + + ++S R+ + +++L T I L +++N + + I+ +
Sbjct: 5 KTQQYIIGYSSISIALLRWSIYDSLRKSFNFVMFLVEFTDGIKLGIIVNFIIFLFLIIDK 64
Query: 60 LIKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWL 119
++ + GSLR EVE L E+ ++ +L + + ++ M ++ K H +
Sbjct: 65 SLQILLFGSLRMIEVEHLFEKLPICVINLLLNLATGDNNIIMNVFLMGLSMSF-KVFHVI 123
Query: 120 AQKRVEYIETTPTVPL------LSHIRIVSF---MSFLLLVDSLFL-YSSVKFLL----Q 165
R++Y+ + L+ + I F +SF L + +F + KFL+ Q
Sbjct: 124 MFDRLDYVNLIIVNKINDEDIYLNQV-IYHFGTSISFWLNIFFIFADFRLAKFLVYDVFQ 182
Query: 166 TRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDM 200
+ L F F++ + ++ F K + + ++
Sbjct: 183 GINSVTCLLFGFQFAVQGVQALTYFSKLLLGIYEI 217
>SGD|S000005373 [details] [associations]
symbol:HRD1 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IGI;IDA;IMP;IPI] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISM;IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IGI] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA;IDA] [GO:0000838 "Hrd1p ubiquitin
ligase ERAD-M complex" evidence=IDA] [GO:0000839 "Hrd1p ubiquitin
ligase ERAD-L complex" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
SGD:S000005373 Prosite:PS00518 GO:GO:0016021 EMBL:BK006948
GO:GO:0046872 GO:GO:0008270 GO:GO:0031505 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0000839 KO:K10601
OrthoDB:EOG4W3WW9 EMBL:Z74755 PIR:S66695 RefSeq:NP_014630.1
ProteinModelPortal:Q08109 SMR:Q08109 DIP:DIP-8850N IntAct:Q08109
MINT:MINT-1956720 STRING:Q08109 PaxDb:Q08109 EnsemblFungi:YOL013C
GeneID:854149 KEGG:sce:YOL013C CYGD:YOL013c HOGENOM:HOG000112947
OMA:SATRISA NextBio:975899 Genevestigator:Q08109 GermOnline:YOL013C
GO:GO:0000838 Uniprot:Q08109
Length = 551
Score = 148 (57.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 49/191 (25%), Positives = 87/191 (45%)
Query: 202 MEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIREL-YETFRNFRIRV 260
+EG++ + + ++ LHLSM + F + P+ L++++ ++ ++
Sbjct: 264 LEGKFMYEKAIDVFTRFLKTALHLSMLIPFRM--------PMMLLKDVVWDILALYQSGT 315
Query: 261 ADYVRYRKITSNMNDRFPDASPEELDAS---DSTCIICREEMTTA-------------KK 304
+ + +R ++D + E+L S D+ CIIC +E+ + K+
Sbjct: 316 SLWKIWRN-NKQLDDTLVTVTVEQLQNSANDDNICIICMDELIHSPNQQTWKNKNKKPKR 374
Query: 305 LICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTA 364
L CGH+ H+ CL++W+ER TCP CR L V E G + D T T +T
Sbjct: 375 LPCGHILHLSCLKNWMERSQTCPICR-LPVFDEKG-NVVQTTFTSNSDITTQTTVTDSTG 432
Query: 365 ----SQGSAND 371
QG AN+
Sbjct: 433 IATDQQGFANE 443
Score = 137 (53.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 49/201 (24%), Positives = 95/201 (47%)
Query: 3 RLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLIK 62
+L + +++ T VY A + F + L+ +L++L L+ +LWQL+
Sbjct: 9 QLAIFVVVTYLLTFYCVYSATKTSVSFLQVTLKLNEG-FNLMVLSIFILLNSTLLWQLLT 67
Query: 63 KVFLGSLREAEVERLNEQSRREIMEILFAITIF--RQDFSVSFLAMVTTLLLIKALHWLA 120
K+ G LR E E + E+ I+ LF ++F R F+V+F ++ LL +K HW+
Sbjct: 68 KLLFGELRLIEHEHIFERLPFTIINTLFMSSLFHERYFFTVAFFGLL--LLYLKVFHWIL 125
Query: 121 QKRVEY----IETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQA---SVSL 173
+ R+E I + T+ L R + L +VD + + + +++ S SL
Sbjct: 126 KDRLEALLQSINDSTTMKTLIFSRFSFNLVLLAVVDYQIITRCISSIYTNQKSDIESTSL 185
Query: 174 FFS--FEYMILATTTVSIFVK 192
+ E+ +L +++F++
Sbjct: 186 YLIQVMEFTMLLIDLLNLFLQ 206
Score = 49 (22.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 25/106 (23%), Positives = 53/106 (50%)
Query: 60 LIKKVFLGSLR---EAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKAL 116
L KVF L+ EA ++ +N+ + + + +F+ R F++ LA+V ++ + +
Sbjct: 116 LYLKVFHWILKDRLEALLQSINDSTTMKTL--IFS----RFSFNLVLLAVVDYQIITRCI 169
Query: 117 HWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKF 162
+ + IE+T L I+++ F L+ + +LFL + + F
Sbjct: 170 SSIYTNQKSDIESTS----LYLIQVMEFTMLLIDLLNLFLQTCLNF 211
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 133 VPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILA 183
VP ++ F+ L+ +YS+ K + Q ++ L F M+L+
Sbjct: 2 VPENRRKQLAIFVVVTYLLTFYCVYSATKTSVSFLQVTLKLNEGFNLMVLS 52
>UNIPROTKB|H3BRK9 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HGNC:HGNC:463 ChiTaRS:AMFR PANTHER:PTHR12477:SF4 EMBL:AC092140
EMBL:AC009102 Ensembl:ENST00000567738 Bgee:H3BRK9 Uniprot:H3BRK9
Length = 288
Score = 212 (79.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 39/88 (44%), Positives = 53/88 (60%)
Query: 243 LHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTA 302
L + +L F + R+ + Y ++ NM RF A+PEEL ++ C IC + M A
Sbjct: 7 LVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAA 66
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCR 330
+KL CGHLFH CLRSWLE+ +CPTCR
Sbjct: 67 RKLPCGHLFHNSCLRSWLEQDTSCPTCR 94
>UNIPROTKB|H3BSK3 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR026608 GO:GO:0005634 GO:GO:0005737
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0016567
GO:GO:0030426 GO:GO:0007611 GO:GO:0004842 HGNC:HGNC:463
ChiTaRS:AMFR PANTHER:PTHR12477:SF4 EMBL:AC092140 EMBL:AC009102
Ensembl:ENST00000565445 Bgee:H3BSK3 Uniprot:H3BSK3
Length = 229
Score = 174 (66.3 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 59 QLIKKVFLGSLREAEVERLNEQSRREIM-EILFAITIFR-QDFS--VSFLAMVTTLLLIK 114
+LI+ + G LR +E + L ++ I + +F + Q V + L+ +
Sbjct: 5 KLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLH 64
Query: 115 ALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLF 174
+ L + R EY+ +PT P+ SH R++S + +LL L + T F
Sbjct: 65 LMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLL-SCCGLAAVCSITGYTHGMHTLAF 123
Query: 175 FSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLC--FF 232
+ E +++ T + ++YV ++ D+ EG WE K Y +Y + + +L LS+ L
Sbjct: 124 MAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIH 183
Query: 233 LVIFMNYGVP---LHLIRELYETFRNFRIRVADYVRYRKITSNM 273
+++F N + L + +L F + R+ + Y ++ NM
Sbjct: 184 MLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNM 227
>MGI|MGI:1921565 [details] [associations]
symbol:Rnf145 "ring finger protein 145" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1921565 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 HSSP:Q9H0F5 eggNOG:NOG246550
InterPro:IPR025754 Pfam:PF13705 HOGENOM:HOG000072697
HOVERGEN:HBG054921 OrthoDB:EOG4BCDMJ CTD:153830 OMA:AGAEQNV
EMBL:AK014408 EMBL:AK043002 EMBL:AL603913 EMBL:BC040799
IPI:IPI00757041 RefSeq:NP_083138.2 UniGene:Mm.156771
ProteinModelPortal:Q5SWK7 SMR:Q5SWK7 PhosphoSite:Q5SWK7
PRIDE:Q5SWK7 Ensembl:ENSMUST00000019333 GeneID:74315 KEGG:mmu:74315
UCSC:uc007inh.2 InParanoid:Q5SWK7 ChiTaRS:RNF145 NextBio:340427
Bgee:Q5SWK7 CleanEx:MM_RNF145 Genevestigator:Q5SWK7 Uniprot:Q5SWK7
Length = 663
Score = 179 (68.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 68/311 (21%), Positives = 116/311 (37%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 330 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 389
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 390 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 444
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC IF + G + I Y + ++
Sbjct: 445 ENMDDVIYYVNGTYRLLEFVVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQL 504
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M +A C H FH CL+
Sbjct: 505 GWKSFLLRRDAVNKIKS-LPVATQEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKK 563
Query: 319 WLERQHTCPTCR---------------ALVVPPENGASTAGVQHGQRPDTHQSGTATANT 363
WL Q TCP C A PP +Q G P H+S T
Sbjct: 564 WLYVQDTCPLCHCHLKNSSQLPGLGTEAAPQPPAGAEQNIVLQEGPEPPDHESPPGTGTQ 623
Query: 364 ASQGSANDAAN 374
G +++ N
Sbjct: 624 EGSGDSSEHIN 634
>UNIPROTKB|A8WWR3 [details] [associations]
symbol:hrdl-1 "E3 ubiquitin-protein ligase hrd-like protein
1" species:6238 "Caenorhabditis briggsae" [GO:1901214 "regulation
of neuron death" evidence=ISS] InterPro:IPR001841
InterPro:IPR003892 Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51140 SMART:SM00184 SMART:SM00546 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K10636 EMBL:HE600906 GO:GO:1901214
RefSeq:XP_002639237.1 ProteinModelPortal:A8WWR3 STRING:A8WWR3
EnsemblMetazoa:CBG03795 GeneID:8581231 KEGG:cbr:CBG03795
CTD:8581231 WormBase:CBG03795 eggNOG:NOG288143 HOGENOM:HOG000112950
OMA:FRSTYIL Uniprot:A8WWR3
Length = 578
Score = 183 (69.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 59/238 (24%), Positives = 109/238 (45%)
Query: 116 LHWLAQKRVEYIETTPTVPLLSH-IRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLF 174
L ++ +R++Y T+P+ S + +S F + + F+ S + L+ Q +V L+
Sbjct: 179 LQFVTCQRLKY--TSPSCDRGSQRVSFISLFLFFVSIAMTFMVSRFQQHLEW-QPAVLLY 235
Query: 175 FSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLL-HLSMYLCFFL 233
F +LA S ++ + S + + + ++LEL + L +L +
Sbjct: 236 FD---CLLAVFR-STYILFRCISSSRVFSFNPDSVRHFNYWLELATNFACELLQFLSYAQ 291
Query: 234 VIFMNYGVPLHLIRELYE---TFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDS 290
+ G+ L I LY T+ R ++ + ++KI ++ +P SD
Sbjct: 292 LFVFAPGLNLTSIFFLYHMKLTYNCMREQLGRHRTHKKIFEHIESAYPSVKAAN---SDD 348
Query: 291 TCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHG 348
CI+C E + T+++L C H FH CL WL + +CPTCR ++ P+ AS +G
Sbjct: 349 RCIVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTCRYVIPSPQEEASRTDSGNG 406
Score = 39 (18.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 54 MCILWQLIKKVFLGSLREAEVERLNEQSRREIMEIL--FAITIFRQDFSVSFLAMVTTLL 111
+C+ + VF + E++RL E+ R + F I I S F M +L
Sbjct: 38 LCVAFIASASVFTHFHSQPEIKRLLEEELRNNTRLTTAFGINIDTIAGSTVF-QMAHYIL 96
Query: 112 LIKALHWLA 120
L W+A
Sbjct: 97 TDTTLIWVA 105
>TAIR|locus:2185088 [details] [associations]
symbol:AT5G01960 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 InterPro:IPR017907
eggNOG:NOG329292 HOGENOM:HOG000237544 EMBL:AY099711 EMBL:BT000282
IPI:IPI00535670 RefSeq:NP_568096.1 UniGene:At.48970
UniGene:At.71061 ProteinModelPortal:Q8L610 SMR:Q8L610 PaxDb:Q8L610
PRIDE:Q8L610 EnsemblPlants:AT5G01960.1 GeneID:831906
KEGG:ath:AT5G01960 TAIR:At5g01960 InParanoid:Q8L610 OMA:FSTKDRC
PhylomeDB:Q8L610 ProtClustDB:CLSN2689405 ArrayExpress:Q8L610
Genevestigator:Q8L610 Uniprot:Q8L610
Length = 426
Score = 173 (66.0 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 75/288 (26%), Positives = 134/288 (46%)
Query: 70 REAEVERLN-EQSRREIMEIL-FAI---TIF-RQDFSVSFLAMVTTLLLIKALHWLAQKR 123
R++ +R + +Q+ R I +IL F++ +F RQ F+A+ ++ K+ L K+
Sbjct: 128 RDSPYQRYDIQQAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSNDIL--KK 185
Query: 124 VEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKF-LLQTRQASVSLFFSFEYMIL 182
++ + L I V+F + ++ V F + + L+ S+ F+ ++I+
Sbjct: 186 QTALKGERHISALIGIS-VAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIV 244
Query: 183 ATTTV----SIFVKYVFYVSDMLMEGQWERK-----AVYTFYLELIRDLLHLSMYLCFFL 233
T+ S+ K + G+ RK + +++ L R LL ++ FFL
Sbjct: 245 VNDTLVRQASMIFKCFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFL 304
Query: 234 VIFMNYGVPLH-LIRELYETFRNFRI--RVADYVRYRKITSNMNDRFPD-ASPEELDASD 289
+YG L+ LY TF+ + +V + K S + A+ E+++A+
Sbjct: 305 N--KDYGSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAG 362
Query: 290 STCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
C IC+E+M T L C H+F C+ W ER+ TCP CRALV P +
Sbjct: 363 DLCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPAD 410
>UNIPROTKB|F1RR35 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:FP016137 Ensembl:ENSSSCT00000018556 Uniprot:F1RR35
Length = 617
Score = 175 (66.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 64/290 (22%), Positives = 113/290 (38%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 278 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 337
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 338 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 392
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC IF + G + I Y + ++
Sbjct: 393 ENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQL 452
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M +A C H FH CL+
Sbjct: 453 GWKSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKK 511
Query: 319 WLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTASQGS 368
WL Q TCP C + +N + G+ G P A N +G+
Sbjct: 512 WLYVQETCPLCHCHL---KNSSQLPGL--GSEPVPQPPAGAEQNVPEEGT 556
>TAIR|locus:4515102991 [details] [associations]
symbol:AT2G44581 "AT2G44581" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG329235
HOGENOM:HOG000015208 ProtClustDB:CLSN2681377 IPI:IPI00891754
RefSeq:NP_001118526.1 UniGene:At.73710 ProteinModelPortal:B3H6J7
SMR:B3H6J7 EnsemblPlants:AT2G44581.1 GeneID:6241397
KEGG:ath:AT2G44581 TAIR:At2g44581 OMA:ATEGEKM PhylomeDB:B3H6J7
Genevestigator:B3H6J7 Uniprot:B3H6J7
Length = 145
Score = 151 (58.2 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 219 IRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFP 278
+ ++ LS ++ ++I V + +R Y F F + + RYR T + R+
Sbjct: 3 VETVIQLSQFIAESVIIV---SVAVFTLRLFYR-FACF-LASRSWRRYRTFTVHHRRRWR 57
Query: 279 DASPEELDASDSTCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALV- 333
+ EE +S C IC E T +K+ C H FHV C+ WLE++ CP CRA +
Sbjct: 58 KTTAEEKHSSPY-CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIP 116
Query: 334 -VPPEN 338
VPP N
Sbjct: 117 PVPPGN 122
>FB|FBgn0039668 [details] [associations]
symbol:Trc8 "Trc8" species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045926 "negative
regulation of growth" evidence=IMP] [GO:0007418 "ventral midline
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005783 EMBL:AE014297 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 GO:GO:0045926
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00530000062938
GO:GO:0007418 eggNOG:NOG246550 KO:K15703 InterPro:IPR025754
Pfam:PF13705 EMBL:AF387786 EMBL:AY069375 EMBL:AY122250
EMBL:BT001260 RefSeq:NP_733292.1 RefSeq:NP_733293.1
RefSeq:NP_996303.1 RefSeq:NP_996304.1 UniGene:Dm.7902
ProteinModelPortal:Q7KRW1 SMR:Q7KRW1 IntAct:Q7KRW1 STRING:Q7KRW1
PaxDb:Q7KRW1 PRIDE:Q7KRW1 EnsemblMetazoa:FBtr0085432 GeneID:43476
KEGG:dme:Dmel_CG2304 UCSC:CG2304-RA CTD:43476 FlyBase:FBgn0039668
InParanoid:Q7KRW1 OMA:CETLTAV OrthoDB:EOG47WM3V PhylomeDB:Q7KRW1
GenomeRNAi:43476 NextBio:834128 Bgee:Q7KRW1 GermOnline:CG2304
Uniprot:Q7KRW1
Length = 809
Score = 180 (68.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 68/288 (23%), Positives = 116/288 (40%)
Query: 104 LAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFL 163
L ++ T LL LH + + + H+R +S +FL+++ LY +
Sbjct: 425 LCLLMTALL-HFLHNIVSPILMSLSAARNPSRKRHVRALSVCAFLVVLSVSLLYHL--WS 481
Query: 164 LQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLL 223
Q+ + +F ++ VS+ Y ++ D + WE+ Y +Y+ +
Sbjct: 482 QQSISTWLLAVTAFSVEVVVKVLVSL-ATYTLFLLDARRQFFWEKLDDYLYYVRAFGN-- 538
Query: 224 HLSMYLCFFLVIFMN-------------YGVPLHLIRELYETFRNFRIRV-ADYVRYRKI 269
S+ CF +++F+N G + I + N A + + K
Sbjct: 539 --SVEFCFGILLFINGAWILIFESAQNATGGGIRAIMMCIHAYFNIWCEARAGWSVFMKR 596
Query: 270 TSNMN--DRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCP 327
S ++ P+A+P +L A D C IC +EM +AK C H FH CLR WL Q CP
Sbjct: 597 RSAVHKISALPEATPAQLQAFDDVCAICYQEMYSAKITRCRHFFHGVCLRKWLYVQDRCP 656
Query: 328 TCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTASQGSANDAANN 375
C +++ + A P+ + A A + D ANN
Sbjct: 657 LCHEIMMYTDKADENA-------PEAEPAPAAQAEQPMRIYPRDDANN 697
Score = 43 (20.2 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 6 TYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQLIKKVF 65
T G +F++ + V + R PSMV ++ L++ G V+M + L+ + F
Sbjct: 156 TSLGLTFLSYWSNVSALALTERS--PSMVE-DLMSLNTTRLLDSGGVVMSLAPHLMAQWF 212
Query: 66 LGSL 69
+G L
Sbjct: 213 MGML 216
>WB|WBGene00009164 [details] [associations]
symbol:hrdl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IGI] InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184
SMART:SM00546 Prosite:PS00518 GO:GO:0016021 GO:GO:0009792
GO:GO:0006915 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0035264 KO:K10636
GeneTree:ENSGT00530000062938 GO:GO:1901214 EMBL:Z81070
eggNOG:NOG288143 HOGENOM:HOG000112950 OMA:FRSTYIL EMBL:Z81075
PIR:T21423 RefSeq:NP_492602.1 ProteinModelPortal:P90859 SMR:P90859
STRING:P90859 EnsemblMetazoa:F26E4.11 GeneID:172833
KEGG:cel:CELE_F26E4.11 CTD:172833 WormBase:F26E4.11
InParanoid:P90859 NextBio:877187 Uniprot:P90859
Length = 564
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 57/228 (25%), Positives = 107/228 (46%)
Query: 116 LHWLAQKRVEYIETTPTVPLLSH-IRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLF 174
L ++ +R+++I +P+ S I +S F + + FL S + L T Q +V L+
Sbjct: 164 LQFITCQRLKHI--SPSCDRGSQKISFLSLFLFFVSIAMTFLISRFQHHL-TWQPAVLLY 220
Query: 175 FSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLL-HLSMYLCFFL 233
F +LA S ++ + S + + + ++LELI + + L L F
Sbjct: 221 FD---CLLAVFR-STYILFRCISSSRVFSFNPDSVRHFNYWLELITNFVCELIQMLSFAQ 276
Query: 234 VIFMNYGVPLHLIRELYE---TFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDS 290
++ + G+ L I LY T+ +++ + ++KI ++ +P D
Sbjct: 277 LLAFSPGLNLTSIFFLYHMKLTYNCMTEQLSRHRNHKKIFEHIERSYPSVKCAN---GDD 333
Query: 291 TCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
C++C E + T+++L C H FH CL WL + +CPTCR + P++
Sbjct: 334 RCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTCRCTIPSPQD 381
>UNIPROTKB|P90859 [details] [associations]
symbol:hrdl-1 "E3 ubiquitin-protein ligase hrd-like protein
1" species:6239 "Caenorhabditis elegans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:1901214 "regulation of neuron death" evidence=IMP]
InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
Prosite:PS00518 GO:GO:0016021 GO:GO:0009792 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0035264 KO:K10636 GeneTree:ENSGT00530000062938 GO:GO:1901214
EMBL:Z81070 eggNOG:NOG288143 HOGENOM:HOG000112950 OMA:FRSTYIL
EMBL:Z81075 PIR:T21423 RefSeq:NP_492602.1 ProteinModelPortal:P90859
SMR:P90859 STRING:P90859 EnsemblMetazoa:F26E4.11 GeneID:172833
KEGG:cel:CELE_F26E4.11 CTD:172833 WormBase:F26E4.11
InParanoid:P90859 NextBio:877187 Uniprot:P90859
Length = 564
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 57/228 (25%), Positives = 107/228 (46%)
Query: 116 LHWLAQKRVEYIETTPTVPLLSH-IRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLF 174
L ++ +R+++I +P+ S I +S F + + FL S + L T Q +V L+
Sbjct: 164 LQFITCQRLKHI--SPSCDRGSQKISFLSLFLFFVSIAMTFLISRFQHHL-TWQPAVLLY 220
Query: 175 FSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLL-HLSMYLCFFL 233
F +LA S ++ + S + + + ++LELI + + L L F
Sbjct: 221 FD---CLLAVFR-STYILFRCISSSRVFSFNPDSVRHFNYWLELITNFVCELIQMLSFAQ 276
Query: 234 VIFMNYGVPLHLIRELYE---TFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDS 290
++ + G+ L I LY T+ +++ + ++KI ++ +P D
Sbjct: 277 LLAFSPGLNLTSIFFLYHMKLTYNCMTEQLSRHRNHKKIFEHIERSYPSVKCAN---GDD 333
Query: 291 TCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
C++C E + T+++L C H FH CL WL + +CPTCR + P++
Sbjct: 334 RCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTCRCTIPSPQD 381
>UNIPROTKB|E1C258 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:AADN02028698 IPI:IPI00579284
Ensembl:ENSGALT00000005847 Uniprot:E1C258
Length = 667
Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 58/258 (22%), Positives = 102/258 (39%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 330 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 389
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 390 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 444
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC +F + G + I Y + ++
Sbjct: 445 ENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETVFGEWTVMGSVIIFIHSYYNVWLRAQL 504
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M TA C H FH CL+
Sbjct: 505 GWKSFLLRRDAVNKIKS-LPTATKEQLEQHNDICAICYQDMKTAVITPCSHFFHAGCLKK 563
Query: 319 WLERQHTCPTCRALVVPP 336
WL Q TCP C + P
Sbjct: 564 WLYVQETCPLCHCQLKSP 581
>UNIPROTKB|E3M334 [details] [associations]
symbol:Cre-hrdl-1 "CRE-HRDL-1 protein" species:31234
"Caenorhabditis remanei" [GO:1901214 "regulation of neuron death"
evidence=ISS] InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184
SMART:SM00546 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:1901214 OMA:FRSTYIL EMBL:DS268423
RefSeq:XP_003109304.1 EnsemblMetazoa:CRE08050 GeneID:9821113
CTD:9821113 Uniprot:E3M334
Length = 577
Score = 174 (66.3 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 55/228 (24%), Positives = 110/228 (48%)
Query: 116 LHWLAQKRVEYIETTPTVPLLSH-IRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLF 174
L ++ +R++Y T+P+ S + I+S F++ + + S + L+ Q +V L+
Sbjct: 179 LQFVTCQRLKY--TSPSCDRGSQKVSILSVFLFIVSIAMSVMVSRFQQHLEW-QPAVLLY 235
Query: 175 FSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLL-HLSMYLCFFL 233
F +LA S ++ + S L + + ++LELI + + L +
Sbjct: 236 FD---CLLALFR-STYILFRCTSSSRLFSFNPDSVRHFNYWLELITNFVCELIQMFSYAQ 291
Query: 234 VIFMNYGVPLHLIRELYE---TFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDS 290
+ ++ G+ L + LY T+ R ++ + ++KI ++ + +P SD
Sbjct: 292 LFVVSPGLNLTSLFFLYHMKLTYNCMREQLGRHRTHKKIFEHIENSYPCVKAAN---SDD 348
Query: 291 TCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
C++C E + T+++L C H FH CL WL + +CPTCR ++ P++
Sbjct: 349 RCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTCRCIIPSPQD 396
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 411 GYVVLPQANRPLGDYTSVELGQ 432
G+V PQ + LG + S LG+
Sbjct: 417 GFVHFPQFHIDLGPFLSSLLGR 438
>UNIPROTKB|Q96MT1 [details] [associations]
symbol:RNF145 "RING finger protein 145" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9H0F5 eggNOG:NOG246550 InterPro:IPR025754
Pfam:PF13705 HOGENOM:HOG000072697 HOVERGEN:HBG054921
OrthoDB:EOG4BCDMJ EMBL:AK056513 EMBL:AK304228 EMBL:AK304435
EMBL:AK308394 EMBL:AC134043 EMBL:BC042684 IPI:IPI00043360
IPI:IPI00930398 IPI:IPI00975659 IPI:IPI00976259 IPI:IPI00979590
RefSeq:NP_001186309.1 RefSeq:NP_001186310.1 RefSeq:NP_001186311.1
RefSeq:NP_001186312.1 RefSeq:NP_653327.1 UniGene:Hs.349306
ProteinModelPortal:Q96MT1 SMR:Q96MT1 PhosphoSite:Q96MT1
DMDM:152060502 PRIDE:Q96MT1 Ensembl:ENST00000274542
Ensembl:ENST00000413445 Ensembl:ENST00000424310
Ensembl:ENST00000518802 Ensembl:ENST00000519865
Ensembl:ENST00000520638 Ensembl:ENST00000535312 GeneID:153830
KEGG:hsa:153830 UCSC:uc003lxo.2 UCSC:uc003lxp.3 CTD:153830
GeneCards:GC05M158517 HGNC:HGNC:20853 HPA:HPA036562
neXtProt:NX_Q96MT1 PharmGKB:PA134876286 InParanoid:Q96MT1
OMA:AGAEQNV GenomeRNAi:153830 NextBio:87196 ArrayExpress:Q96MT1
Bgee:Q96MT1 CleanEx:HS_RNF145 Genevestigator:Q96MT1 Uniprot:Q96MT1
Length = 663
Score = 168 (64.2 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 64/288 (22%), Positives = 111/288 (38%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 330 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 389
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 390 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 444
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC IF + G + I Y + ++
Sbjct: 445 ENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQL 504
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M +A C H FH CL+
Sbjct: 505 GWKSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKK 563
Query: 319 WLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTASQ 366
WL Q TCP C + +N + G+ G P A N Q
Sbjct: 564 WLYVQETCPLCHCHL---KNSSQLPGL--GTEPVLQPHAGAEQNVMFQ 606
>UNIPROTKB|E7EW26 [details] [associations]
symbol:RNF145 "RING finger protein 145" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR025754 Pfam:PF13705 EMBL:AC134043 IPI:IPI00975659
HGNC:HGNC:20853 ProteinModelPortal:E7EW26 SMR:E7EW26
Ensembl:ENST00000521606 UCSC:uc011dea.2 ArrayExpress:E7EW26
Bgee:E7EW26 Uniprot:E7EW26
Length = 679
Score = 168 (64.2 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 64/288 (22%), Positives = 111/288 (38%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 346 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 405
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 406 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 460
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC IF + G + I Y + ++
Sbjct: 461 ENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQL 520
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M +A C H FH CL+
Sbjct: 521 GWKSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKK 579
Query: 319 WLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTASQ 366
WL Q TCP C + +N + G+ G P A N Q
Sbjct: 580 WLYVQETCPLCHCHL---KNSSQLPGL--GTEPVLQPHAGAEQNVMFQ 622
>ZFIN|ZDB-GENE-030131-5264 [details] [associations]
symbol:rnf145b "ring finger protein 145b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5264 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG246550
InterPro:IPR025754 Pfam:PF13705 EMBL:BC049437 IPI:IPI00487505
RefSeq:NP_956057.1 UniGene:Dr.75712 ProteinModelPortal:Q7ZWF4
GeneID:327056 KEGG:dre:327056 CTD:327056 HOGENOM:HOG000072697
HOVERGEN:HBG054921 InParanoid:Q7ZWF4 OrthoDB:EOG4BCDMJ
NextBio:20809859 ArrayExpress:Q7ZWF4 Uniprot:Q7ZWF4
Length = 685
Score = 167 (63.8 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 59/282 (20%), Positives = 108/282 (38%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 330 LIELQVIHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 389
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWER 208
L+ + Y +F R L ++ + + + YV ++ + + E
Sbjct: 390 LVFPAYMAYMICQFF---RMDFWLLIIISSSILTSLQVLGTLLIYVLFMVEEFRKAPVEN 446
Query: 209 KAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRIRV 260
+Y+ LL + +C +F + G + L+ Y + ++
Sbjct: 447 MDEVIYYVNGTYRLLEFLVAVCVVAYGVSETLFGEWTVMGSTIILVHSYYNVWLRAQLGW 506
Query: 261 ADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWL 320
++ R + P AS +L + C IC ++M +A C H FH CL+ WL
Sbjct: 507 QSFLLRRDAVHKIQS-MPTASTLQLQQHNDICSICFQDMKSAVITPCSHFFHAACLKKWL 565
Query: 321 ERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATAN 362
Q TCP C +G + +Q P T GT AN
Sbjct: 566 YVQETCPLC--------HGQLKSQLQPTSSPGTPTQGTPAAN 599
>UNIPROTKB|F1PJJ1 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
EMBL:AAEX03003057 Ensembl:ENSCAFT00000027404 Uniprot:F1PJJ1
Length = 688
Score = 167 (63.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 57/251 (22%), Positives = 100/251 (39%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 357 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 416
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 417 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 471
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC IF + G + I Y + ++
Sbjct: 472 ENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQL 531
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M +A C H FH CL+
Sbjct: 532 GWKSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKK 590
Query: 319 WLERQHTCPTC 329
WL Q TCP C
Sbjct: 591 WLYVQETCPLC 601
>UNIPROTKB|F1MGV3 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:DAAA02020846 IPI:IPI00867476 UniGene:Bt.9337
Ensembl:ENSBTAT00000056189 ArrayExpress:F1MGV3 Uniprot:F1MGV3
Length = 707
Score = 167 (63.8 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 57/251 (22%), Positives = 100/251 (39%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 330 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 389
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 390 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 444
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC IF + G + I Y + ++
Sbjct: 445 ENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQL 504
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M +A C H FH CL+
Sbjct: 505 GWKSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKK 563
Query: 319 WLERQHTCPTC 329
WL Q TCP C
Sbjct: 564 WLYVQETCPLC 574
>UNIPROTKB|J9NTM9 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:AAEX03003057 Ensembl:ENSCAFT00000049082
Uniprot:J9NTM9
Length = 766
Score = 167 (63.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 57/251 (22%), Positives = 100/251 (39%)
Query: 89 LFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFL 148
L + + + F +S + + +++++ +A V + + L H R VS FL
Sbjct: 426 LIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFL 485
Query: 149 LLVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTV--SIFVKYVFYVSDMLMEGQW 206
L+ + Y +F L IL + V ++F+ +F V + E
Sbjct: 486 LVFPAYMAYMICQFF----HMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPV- 540
Query: 207 ERKAVYTFYLELIRDLLHLSMYLCFFL-----VIFMNY---GVPLHLIRELYETFRNFRI 258
E +Y+ LL + LC IF + G + I Y + ++
Sbjct: 541 ENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQL 600
Query: 259 RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRS 318
++ R + + P A+ E+L+ + C IC ++M +A C H FH CL+
Sbjct: 601 GWKSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKK 659
Query: 319 WLERQHTCPTC 329
WL Q TCP C
Sbjct: 660 WLYVQETCPLC 670
>UNIPROTKB|H3BQM3 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR026608 GO:GO:0005634 GO:GO:0005737
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0016567
GO:GO:0030426 GO:GO:0007611 GO:GO:0004842 HGNC:HGNC:463
ChiTaRS:AMFR PANTHER:PTHR12477:SF4 EMBL:AC092140 EMBL:AC009102
Ensembl:ENST00000563664 Bgee:H3BQM3 Uniprot:H3BQM3
Length = 165
Score = 141 (54.7 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 59 QLIKKVFLGSLREAEVERLNEQSRREIM-EILFAITIFR-QDFS--VSFLAMVTTLLLIK 114
+LI+ + G LR +E + L ++ I + +F + Q V + L+ +
Sbjct: 5 KLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLH 64
Query: 115 ALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLF 174
+ L + R EY+ +PT P+ SH R++S + +LL L + T F
Sbjct: 65 LMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLL-SCCGLAAVCSITGYTHGMHTLAF 123
Query: 175 FSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFY 215
+ E +++ T + ++YV ++ D+ EG WE K Y +Y
Sbjct: 124 MAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYY 164
>TAIR|locus:4010713708 [details] [associations]
symbol:AT2G44578 "AT2G44578" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG282867
IPI:IPI00846938 RefSeq:NP_001078058.1 UniGene:At.36739
UniGene:At.75339 ProteinModelPortal:A8MS73 SMR:A8MS73
EnsemblPlants:AT2G44578.1 GeneID:5007961 KEGG:ath:AT2G44578
TAIR:At2g44578 HOGENOM:HOG000015208 OMA:AEGEKMR PhylomeDB:A8MS73
ProtClustDB:CLSN2681377 Genevestigator:A8MS73 Uniprot:A8MS73
Length = 145
Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 265 RYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKL----ICGHLFHVHCLRSWL 320
RYR T R+ + EE +S C IC E+ +K+ C H FHV C+ WL
Sbjct: 44 RYRTFTVQHRRRWRKTAAEEKHSSPY-CTICLEDAAEGEKMRRITACSHCFHVDCIDPWL 102
Query: 321 ERQHTCPTCRALV--VPPEN 338
++ TCP CRA + VPP N
Sbjct: 103 MKKSTCPLCRAEIPPVPPGN 122
>RGD|1306670 [details] [associations]
symbol:Rnf139 "ring finger protein 139" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISO] [GO:0031396 "regulation of protein
ubiquitination" evidence=ISO] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0070613
"regulation of protein processing" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1306670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AH009105 IPI:IPI00360791 ProteinModelPortal:Q9JLC5
UCSC:RGD:1306670 InParanoid:Q9JLC5 Genevestigator:Q9JLC5
Uniprot:Q9JLC5
Length = 100
Score = 131 (51.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 26/68 (38%), Positives = 31/68 (45%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHT 325
R +N P+ L D C IC E TT+ ++ C H FH CLR WL Q T
Sbjct: 4 RTAVKKINS-LPEIKGSHLQEIDDVCXICYHEFTTSARITPCNHYFHALCLRKWLYIQDT 62
Query: 326 CPTCRALV 333
CP C V
Sbjct: 63 CPMCHQKV 70
>UNIPROTKB|F1NPF1 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0031396 "regulation of protein ubiquitination" evidence=IEA]
[GO:0060628 "regulation of ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0070613 "regulation of protein processing"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005783 GO:GO:0008285 GO:GO:0017148
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GeneTree:ENSGT00530000062938 GO:GO:0031396
GO:GO:0060628 GO:GO:0070613 OMA:RIRFPDI InterPro:IPR025754
Pfam:PF13705 EMBL:AADN02022490 IPI:IPI00580768
Ensembl:ENSGALT00000026354 Uniprot:F1NPF1
Length = 603
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 59/240 (24%), Positives = 95/240 (39%)
Query: 110 LLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSF--LLLVDS-LFLYSSV-KFLLQ 165
LLL LH++ + T P + LS + SF +L V + LF+ + ++L
Sbjct: 302 LLLTAVLHFI------HGMTDPVLMSLSASHVPSFRRHFPVLFVSACLFILPVLLSYVLW 355
Query: 166 TRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDL 222
A + F+ F + VSI V YV ++ D WE+ Y +Y+ ++
Sbjct: 356 HHYALNTWLFAVTAFCVELCLKVIVSITV-YVLFMIDGYYNVLWEKLDDYVYYVRSTGNI 414
Query: 223 LHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD----YVRYRKITSNMN 274
+ + F + G + + N ++ + ++ R +N
Sbjct: 415 IEFIFGVIMFGNGAYTMVFESGSKIRACMMCLHAYFNIYLQAKNGWKTFINRRTAVKKIN 474
Query: 275 DRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCRALV 333
P+ L D C IC E TT+ ++ C H FH CLR WL Q TCP C V
Sbjct: 475 S-LPEVKGSRLREIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKV 533
>UNIPROTKB|F1RRQ2 [details] [associations]
symbol:F1RRQ2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
EMBL:FP476059 Ensembl:ENSSSCT00000006556 OMA:YNASAFG Uniprot:F1RRQ2
Length = 611
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 72/312 (23%), Positives = 123/312 (39%)
Query: 42 SLVLLMNMGLVIMCILWQLIKKV--FLGSLREAEVERLNEQSRRE--IMEILFAITIFRQ 97
S + ++ M VI I L + F+GS E + RL + I+ + ++ R
Sbjct: 233 STLTVLGMSAVISSIAHYLGLGILAFIGSTEEDD-RRLGFVAPVLFFILALQTGLSGLRP 291
Query: 98 DFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSF--LLLVDS-L 154
+ + L+ LLL LH++ + T P + LS + SF +L V + L
Sbjct: 292 EERLIRLSRNMCLLLTAVLHFI------HGMTDPVLMSLSASHVSSFRRHFPVLFVSACL 345
Query: 155 FLYSSV-KFLLQTRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
F+ + ++L A + F+ F + VS+ V Y ++ D WE+
Sbjct: 346 FILPVLLSYVLWHHYALNTWLFAVTAFCVELCLKVIVSLTV-YTLFMIDGYYNVLWEKLD 404
Query: 211 VYTFYLELIRDLLHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD---- 262
Y +Y+ +++ + F + G + + N ++ +
Sbjct: 405 DYVYYVRSTGNIIEFIFGVVMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKT 464
Query: 263 YVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLE 321
++ R +N P+ L D C IC E TT+ ++ C H FH CLR WL
Sbjct: 465 FMNRRTAVKKINS-LPELKGSRLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLY 523
Query: 322 RQHTCPTCRALV 333
Q TCP C V
Sbjct: 524 IQDTCPMCHQKV 535
>TAIR|locus:2092895 [details] [associations]
symbol:AT3G13430 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000603
HSSP:Q9LRB7 KO:K11982 IPI:IPI00530368 RefSeq:NP_001030687.1
RefSeq:NP_001189879.1 RefSeq:NP_187951.1 UniGene:At.43471
UniGene:At.63540 ProteinModelPortal:Q9LJE9 SMR:Q9LJE9 STRING:Q9LJE9
EnsemblPlants:AT3G13430.1 EnsemblPlants:AT3G13430.2
EnsemblPlants:AT3G13430.3 GeneID:820543 KEGG:ath:AT3G13430
TAIR:At3g13430 InParanoid:Q9LJE9 OMA:RRIRTRH PhylomeDB:Q9LJE9
ProtClustDB:CLSN2684775 Genevestigator:Q9LJE9 Uniprot:Q9LJE9
Length = 315
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 267 RKITSNMNDRF--PDASPEELDA------SDST--CIICREEMTT---AKKLICGHLFHV 313
R +++N+R+ P A+ E ++A DS C +C ++ AK++ C H FH
Sbjct: 190 RLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQCSVCLDDFEIGMEAKEMPCKHKFHS 249
Query: 314 HCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTASQGSANDAA 373
CL WLE +CP CR L+ ++ + + D ++ + A+ AS GS+ D++
Sbjct: 250 DCLLPWLELHSSCPVCRYLLPTGDDDEPKTDAETSRNDDNNED-ISNASMASNGSSPDSS 308
Query: 374 NNNLTLH 380
+NN +++
Sbjct: 309 SNNSSVN 315
>UNIPROTKB|I3LM12 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070613 "regulation of protein processing"
evidence=IEA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0031396 "regulation
of protein ubiquitination" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00530000062938
CTD:11236 KO:K15703 OMA:RIRFPDI InterPro:IPR025754 Pfam:PF13705
EMBL:CU468433 RefSeq:XP_001927566.1 ProteinModelPortal:I3LM12
Ensembl:ENSSSCT00000030960 GeneID:100156613 KEGG:ssc:100156613
Uniprot:I3LM12
Length = 665
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 72/312 (23%), Positives = 123/312 (39%)
Query: 42 SLVLLMNMGLVIMCILWQLIKKV--FLGSLREAEVERLNEQSRRE--IMEILFAITIFRQ 97
S + ++ M VI I L + F+GS E + RL + I+ + ++ R
Sbjct: 287 STLTVLGMSAVISSIAHYLGLGILAFIGSTEEDD-RRLGFVAPVLFFILALQTGLSGLRP 345
Query: 98 DFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSF--LLLVDS-L 154
+ + L+ LLL LH++ + T P + LS + SF +L V + L
Sbjct: 346 EERLIRLSRNMCLLLTAVLHFI------HGMTDPVLMSLSASHVSSFRRHFPVLFVSACL 399
Query: 155 FLYSSV-KFLLQTRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
F+ + ++L A + F+ F + VS+ V Y ++ D WE+
Sbjct: 400 FILPVLLSYVLWHHYALNTWLFAVTAFCVELCLKVIVSLTV-YTLFMIDGYYNVLWEKLD 458
Query: 211 VYTFYLELIRDLLHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD---- 262
Y +Y+ +++ + F + G + + N ++ +
Sbjct: 459 DYVYYVRSTGNIIEFIFGVVMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKT 518
Query: 263 YVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLE 321
++ R +N P+ L D C IC E TT+ ++ C H FH CLR WL
Sbjct: 519 FMNRRTAVKKINS-LPELKGSRLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLY 577
Query: 322 RQHTCPTCRALV 333
Q TCP C V
Sbjct: 578 IQDTCPMCHQKV 589
>MGI|MGI:1923091 [details] [associations]
symbol:Rnf139 "ring finger protein 139" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=ISO] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISO] [GO:0031396
"regulation of protein ubiquitination" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0070613
"regulation of protein processing" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
MGI:MGI:1923091 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
GO:GO:0008285 GO:GO:0017148 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GeneTree:ENSGT00530000062938 GO:GO:0031396 GO:GO:0060628
GO:GO:0070613 CTD:11236 eggNOG:NOG246550 HOGENOM:HOG000267029
HOVERGEN:HBG053146 KO:K15703 OrthoDB:EOG4H4638 InterPro:IPR025754
Pfam:PF13705 EMBL:AK033506 EMBL:BC052901 IPI:IPI00227711
RefSeq:NP_780435.1 UniGene:Mm.4537 UniGene:Mm.460627
ProteinModelPortal:Q7TMV1 SMR:Q7TMV1 STRING:Q7TMV1
PhosphoSite:Q7TMV1 PRIDE:Q7TMV1 Ensembl:ENSMUST00000036904
GeneID:75841 KEGG:mmu:75841 UCSC:uc007vtq.2 InParanoid:Q7TMV1
NextBio:344088 Bgee:Q7TMV1 CleanEx:MM_RNF139 Genevestigator:Q7TMV1
GermOnline:ENSMUSG00000037075 Uniprot:Q7TMV1
Length = 668
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 73/312 (23%), Positives = 125/312 (40%)
Query: 42 SLVLLMNMGLVIMCILWQLIKKV--FLGSLREAEVERLNEQSRRE--IMEILFAITIFRQ 97
S + ++ M VI I L + F+GS E + RL + I+ + ++ R
Sbjct: 287 STLTVLGMSAVISSIAHYLGLGILAFIGSTEEDD-RRLGFVAPVLFFILALQTGLSGLRP 345
Query: 98 DFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSF-MSF-LLLVDS-L 154
+ + L+ LLL LH++ + T P + LS + SF F +L V + L
Sbjct: 346 EERLIRLSRNMCLLLTAVLHFI------HGMTDPVLMSLSASHVSSFHRHFPVLFVSACL 399
Query: 155 FLYSSV-KFLLQTRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
F+ + ++L A + F+ F + VS+ V Y ++ D WE+
Sbjct: 400 FILPVLLSYVLWHHYALNTWLFAVTAFCVELCLKVIVSLTV-YTLFMIDGYYNVLWEKLD 458
Query: 211 VYTFYLELIRDLLHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD---- 262
Y +++ +++ + F + G + + N ++V +
Sbjct: 459 DYVYFVRSTGNIIEFIFGVVMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQVKNGWKT 518
Query: 263 YVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLE 321
++ R +N P+ L D C IC E TT+ ++ C H FH CLR WL
Sbjct: 519 FMNRRTAVKKINS-LPEIKGSHLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLY 577
Query: 322 RQHTCPTCRALV 333
Q TCP C V
Sbjct: 578 IQDTCPMCHQKV 589
>TAIR|locus:2117622 [details] [associations]
symbol:RHA3B "RING-H2 finger A3B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010200 "response
to chitin" evidence=IEP] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 EMBL:AL161587 HOGENOM:HOG000237642
ProtClustDB:CLSN2683892 EMBL:AF078825 EMBL:DQ059126 EMBL:AL117188
EMBL:BT030633 EMBL:AY087082 IPI:IPI00540490 PIR:T41745
RefSeq:NP_195273.1 UniGene:At.23630 ProteinModelPortal:Q9ZT49
SMR:Q9ZT49 STRING:Q9ZT49 EnsemblPlants:AT4G35480.1 GeneID:829700
KEGG:ath:AT4G35480 GeneFarm:4095 TAIR:At4g35480 InParanoid:Q9ZT49
OMA:CAICITE PhylomeDB:Q9ZT49 Genevestigator:Q9ZT49 Uniprot:Q9ZT49
Length = 200
Score = 136 (52.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 270 TSNMNDRFPDASPEELDASDSTCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHT 325
T+ D P +S + D+S + C IC E + +++ +C H FHV C+ WL + +
Sbjct: 92 TAAAADDLPCSSVGDGDSS-TECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSS 150
Query: 326 CPTCRALVVPPE-----NGASTAGVQHGQRPDTHQ 355
CP+CR ++VP + + ASTA Q +P HQ
Sbjct: 151 CPSCRRILVPVKCDRCGHHASTAETQVKDQPPHHQ 185
>UNIPROTKB|J9P149 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 CTD:11236 KO:K15703 OMA:RIRFPDI
InterPro:IPR025754 Pfam:PF13705 EMBL:AAEX03008789
RefSeq:XP_851772.1 ProteinModelPortal:J9P149
Ensembl:ENSCAFT00000050017 GeneID:609422 KEGG:cfa:609422
Uniprot:J9P149
Length = 664
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 72/312 (23%), Positives = 123/312 (39%)
Query: 42 SLVLLMNMGLVIMCILWQLIKKV--FLGSLREAEVERLNEQSRRE--IMEILFAITIFRQ 97
S + ++ M VI I L + F+GS E + RL + I+ + ++ R
Sbjct: 287 STLTVLGMSAVISSIAHYLGLGILAFIGSTEEDD-RRLGFVAPVLFFILALQTGLSGLRP 345
Query: 98 DFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSF--LLLVDS-L 154
+ + L+ LLL LH++ + T P + LS + SF +L V + L
Sbjct: 346 EERLIRLSRNMCLLLTAVLHFI------HGMTDPVLMSLSASHVSSFRRHFPVLFVSACL 399
Query: 155 FLYSSV-KFLLQTRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
F+ + ++L A + F+ F + VS+ V Y ++ D WE+
Sbjct: 400 FILPVLLSYVLWHHYALNTWLFAVTAFCVELCLKVIVSLTV-YTLFMIDGYYNVLWEKLD 458
Query: 211 VYTFYLELIRDLLHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD---- 262
Y +Y+ +++ + F + G + + N ++ +
Sbjct: 459 DYVYYVRSTGNIIEFIFGVVMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKT 518
Query: 263 YVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLE 321
++ R +N P+ L D C IC E TT+ ++ C H FH CLR WL
Sbjct: 519 FMNRRTAVKKINS-LPEIKGSRLREIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLY 577
Query: 322 RQHTCPTCRALV 333
Q TCP C V
Sbjct: 578 IQDTCPMCHQKV 589
>UNIPROTKB|Q86Y13 [details] [associations]
symbol:DZIP3 "E3 ubiquitin-protein ligase DZIP3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0031593 "polyubiquitin binding"
evidence=IDA] [GO:0019902 "phosphatase binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 Reactome:REACT_6900 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031593 GO:GO:0004842 GO:GO:0000209 GO:GO:0019902
EMBL:AY227651 EMBL:AY227652 EMBL:AY227653 EMBL:AY227654
EMBL:AB014575 EMBL:AK023138 EMBL:BC039018 EMBL:BC056674
EMBL:BC063882 EMBL:AF279370 IPI:IPI00452463 IPI:IPI00945954
PIR:T00362 RefSeq:NP_055463.1 UniGene:Hs.409210
ProteinModelPortal:Q86Y13 SMR:Q86Y13 IntAct:Q86Y13
MINT:MINT-2867156 STRING:Q86Y13 PhosphoSite:Q86Y13 DMDM:50400482
PaxDb:Q86Y13 PRIDE:Q86Y13 DNASU:9666 Ensembl:ENST00000361582
Ensembl:ENST00000463306 Ensembl:ENST00000495008 GeneID:9666
KEGG:hsa:9666 UCSC:uc003dxd.3 CTD:9666 GeneCards:GC03P108308
HGNC:HGNC:30938 HPA:HPA035066 MIM:608672 neXtProt:NX_Q86Y13
PharmGKB:PA162384137 eggNOG:NOG126093 HOVERGEN:HBG051428
InParanoid:Q86Y13 KO:K10642 OMA:RLCKYRD OrthoDB:EOG4V1700
GenomeRNAi:9666 NextBio:36295 ArrayExpress:Q86Y13 Bgee:Q86Y13
Genevestigator:Q86Y13 GermOnline:ENSG00000198919 Uniprot:Q86Y13
Length = 1208
Score = 151 (58.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 266 YRKITSNMNDRFPDAS-PEELDASDSTCIICREEMT--TAKKLICGHLFHVHCLRSWLER 322
+R +TS + AS P+E + + C+IC E ++ L C H FH C+R WL +
Sbjct: 1121 WRPLTSQGPATWEGASNPDEEEEEEEPCVICHENLSPENLSVLPCAHKFHAQCIRPWLMQ 1180
Query: 323 QHTCPTCRALVVPPE 337
Q TCPTCR V+ PE
Sbjct: 1181 QGTCPTCRLHVLLPE 1195
>WB|WBGene00022471 [details] [associations]
symbol:Y119C1B.5 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00530000062938
EMBL:FO080992 eggNOG:NOG246550 InterPro:IPR025754 Pfam:PF13705
RefSeq:NP_491382.2 ProteinModelPortal:Q95Y82 SMR:Q95Y82
DIP:DIP-25789N PaxDb:Q95Y82 EnsemblMetazoa:Y119C1B.5 GeneID:172053
KEGG:cel:CELE_Y119C1B.5 UCSC:Y119C1B.5 CTD:172053
WormBase:Y119C1B.5 HOGENOM:HOG000020440 OMA:ISQFFHM NextBio:873827
Uniprot:Q95Y82
Length = 742
Score = 148 (57.2 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 55/242 (22%), Positives = 105/242 (43%)
Query: 104 LAMVTTLL---LIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSV 160
LA+V ++ L+++L + + + + ++PT H R + ++ LL+V F ++
Sbjct: 397 LALVLYIVISALLQSLFEIIEVVLLNLPSSPTASRARHARCIC-IALLLVVIPFFTTKTM 455
Query: 161 KFLLQTRQASVSLFFSFEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIR 220
LL ++ + + A + + +KY+ + + E WE T+Y++
Sbjct: 456 LALLPI-DIYTAIIIANSATVTARA-IGVILKYIVLIVETKSEEPWEGIDDLTYYIDCAN 513
Query: 221 ---DLLHLSMYLCF--FLVI-----FMNYGVPL-HLIRELYETFRNFRIRVADYVRYRKI 269
+LL + + F V+ F + + L H+I +Y+ + +++ R
Sbjct: 514 KGIELLAAKVVMVFGCMQVVKVGFSFATFAILLFHVIVNIYKRLEH----TVSFIKNRNA 569
Query: 270 T-SNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCP 327
N+N R A +L + C IC EM ++ C H FH CLR WL + CP
Sbjct: 570 AVKNIN-RLSKADVVQLREREDVCAICFIEMKEEARITPCKHYFHGPCLRKWLAVKMVCP 628
Query: 328 TC 329
C
Sbjct: 629 LC 630
>TAIR|locus:2093335 [details] [associations]
symbol:AT3G30460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AP000389 EMBL:BT010504 EMBL:AK175589 EMBL:AK175730
IPI:IPI00520605 RefSeq:NP_189667.1 UniGene:At.36776
ProteinModelPortal:Q9LJV5 SMR:Q9LJV5 PaxDb:Q9LJV5 PRIDE:Q9LJV5
EnsemblPlants:AT3G30460.1 GeneID:822758 KEGG:ath:AT3G30460
TAIR:At3g30460 eggNOG:NOG303537 HOGENOM:HOG000153031
InParanoid:Q9LJV5 OMA:AICREEL PhylomeDB:Q9LJV5
ProtClustDB:CLSN2915427 ArrayExpress:Q9LJV5 Genevestigator:Q9LJV5
Uniprot:Q9LJV5
Length = 147
Score = 122 (48.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 272 NMNDRFP--DASPEEL-DASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHT 325
N + P + + EE+ + C ICREE+ ++L C H +H C+ +WL ++T
Sbjct: 74 NAGEELPVVEFTAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNT 133
Query: 326 CPTCRALVVPPENG 339
CP CR V P +G
Sbjct: 134 CPLCRHNVELPNHG 147
>TAIR|locus:2053863 [details] [associations]
symbol:RHA3A "RING-H2 finger A3A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007584
HOGENOM:HOG000237642 EMBL:AF078824 EMBL:AF370239 EMBL:AY062961
IPI:IPI00548768 PIR:T51844 RefSeq:NP_179337.1 UniGene:At.25384
ProteinModelPortal:O22755 SMR:O22755 STRING:O22755
EnsemblPlants:AT2G17450.1 GeneID:816251 KEGG:ath:AT2G17450
GeneFarm:4094 TAIR:At2g17450 eggNOG:NOG257865 InParanoid:O22755
OMA:DSTECAI PhylomeDB:O22755 ProtClustDB:CLSN2683892
Genevestigator:O22755 GermOnline:AT2G17450 Uniprot:O22755
Length = 185
Score = 130 (50.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVP 335
A+ EE D+++ C IC + +++ +CGH FHV C+ WL + +CP+CR ++ P
Sbjct: 92 AAAEEGDSTE--CAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTP 149
Query: 336 PE----NGASTAGVQ-HGQRPDTHQSGTATANT 363
ASTA ++ R HQ + T T
Sbjct: 150 VRCDRCGHASTAEMKDQAHRHQHHQHSSTTIPT 182
>TAIR|locus:1006230395 [details] [associations]
symbol:AT4G24015 "AT4G24015" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL078468
HOGENOM:HOG000006232 UniGene:At.32387 EMBL:AF079178 EMBL:BT005844
IPI:IPI00523532 PIR:T51850 RefSeq:NP_974604.1
ProteinModelPortal:Q84TF5 SMR:Q84TF5 EnsemblPlants:AT4G24015.1
GeneID:2745724 KEGG:ath:AT4G24015 TAIR:At4g24015 eggNOG:NOG268148
InParanoid:Q84TF5 OMA:TPHLYPQ PhylomeDB:Q84TF5
ProtClustDB:CLSN2713511 Genevestigator:Q84TF5 Uniprot:Q84TF5
Length = 174
Score = 126 (49.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 283 EELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
EEL DS C +C E ++L+ C H+FH+ C+ WL +TCP CR+ V +
Sbjct: 96 EELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSV--SIS 153
Query: 339 GASTAGVQHGQRPDTHQS 356
T+ PD+ Q+
Sbjct: 154 STKTSVDDDNDHPDSPQT 171
>TAIR|locus:2058465 [details] [associations]
symbol:RHC1A "RING-H2 finger C1A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005618 "cell wall" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005618 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC002409 eggNOG:NOG235630 KO:K11982
HOGENOM:HOG000237766 EMBL:AF079180 EMBL:AY139987 EMBL:BT008726
IPI:IPI00547663 PIR:T00747 RefSeq:NP_565942.1 RefSeq:NP_973651.1
RefSeq:NP_973652.1 UniGene:At.20405 ProteinModelPortal:O22197
SMR:O22197 PaxDb:O22197 EnsemblPlants:AT2G40830.1
EnsemblPlants:AT2G40830.2 EnsemblPlants:AT2G40830.3 GeneID:818680
KEGG:ath:AT2G40830 TAIR:At2g40830 InParanoid:O22197 OMA:IDAMPTV
PhylomeDB:O22197 ProtClustDB:CLSN2688851 ArrayExpress:O22197
Genevestigator:O22197 Uniprot:O22197
Length = 328
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 28/94 (29%), Positives = 57/94 (60%)
Query: 285 LDASDSTCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGAS 341
L +SDS C +C++E + AK++ C H++H C+ WL + ++CP CR +P +G S
Sbjct: 183 LRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQ-ELPSASGPS 241
Query: 342 TAGVQHGQRPD-THQSGTATANTASQGSANDAAN 374
++ Q+ P ++S ++++++ S+ + N+ N
Sbjct: 242 SS--QNRTTPTRNYRSSSSSSSSNSRENGNERRN 273
>UNIPROTKB|E1BP63 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070613 "regulation of protein processing"
evidence=IEA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0031396 "regulation
of protein ubiquitination" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0008285
GO:GO:0017148 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GeneTree:ENSGT00530000062938
GO:GO:0031396 GO:GO:0060628 GO:GO:0070613 OMA:RIRFPDI
InterPro:IPR025754 Pfam:PF13705 EMBL:DAAA02038151 IPI:IPI00707240
Ensembl:ENSBTAT00000027187 Uniprot:E1BP63
Length = 668
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 71/312 (22%), Positives = 122/312 (39%)
Query: 42 SLVLLMNMGLVIMCILWQLIKKV--FLGSLREAEVERLNEQSRRE--IMEILFAITIFRQ 97
S + ++ M VI I L + F+GS E + RL + I+ + ++ R
Sbjct: 290 STLTVLGMSAVISSIAHYLGLGILAFIGSTEEDD-RRLGFVAPVLFFILALQTGLSGLRP 348
Query: 98 DFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSF--LLLVDS-L 154
+ + L+ LLL LH++ + T P + LS + S +L V + L
Sbjct: 349 EERLIRLSRNMCLLLTAVLHFI------HGMTDPVLMSLSASHVSSLRRHFPVLFVSACL 402
Query: 155 FLYSSV-KFLLQTRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
F+ + ++L A + F+ F + VS+ V Y ++ D WE+
Sbjct: 403 FILPVILSYVLWHHYALNTWLFAVTAFCVELCLKVIVSLTV-YTLFMIDGYYNVLWEKLD 461
Query: 211 VYTFYLELIRDLLHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD---- 262
Y +Y+ +++ + F + G + + N ++ +
Sbjct: 462 DYVYYVRSTGNIIEFIFGVVMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKT 521
Query: 263 YVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLE 321
++ R +N P+ L D C IC E TT+ ++ C H FH CLR WL
Sbjct: 522 FMNRRTAVKKINS-LPEIKGSRLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLY 580
Query: 322 RQHTCPTCRALV 333
Q TCP C V
Sbjct: 581 IQDTCPMCHQKV 592
>FB|FBgn0039150 [details] [associations]
symbol:CG13605 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:AE014297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
FlyBase:FBgn0039150 EMBL:BT016044 RefSeq:NP_651214.2
UniGene:Dm.11197 SMR:Q9VCD3 IntAct:Q9VCD3 MINT:MINT-871599
EnsemblMetazoa:FBtr0300705 GeneID:42858 KEGG:dme:Dmel_CG13605
UCSC:CG13605-RA InParanoid:Q9VCD3 OMA:IFCDECV OrthoDB:EOG45X6BS
GenomeRNAi:42858 NextBio:830950 Uniprot:Q9VCD3
Length = 669
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 246 IRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKL 305
I EL E ++ + + V +RK N++ P +ELDA+ + C IC + T L
Sbjct: 571 IFELVERGKSLKKAI---VTFRK---NIDSERPPTK-DELDAAGALCPICHDAFNTPTVL 623
Query: 306 ICGHLFHVHCLRSWLERQHTCPTCRALV 333
CGH+F C+++W +R+ TCP CRA V
Sbjct: 624 ECGHIFCDECVQTWFKREQTCPMCRAKV 651
>TAIR|locus:2059793 [details] [associations]
symbol:XERICO species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0009687 "abscisic acid metabolic process" evidence=IMP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0008270 GO:GO:0009687 GO:GO:0010200 GO:GO:0009739
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC007213
HOGENOM:HOG000242879 KO:K16285 EMBL:AF324691 EMBL:AF326867
EMBL:AF339689 IPI:IPI00518775 PIR:E84455 RefSeq:NP_178507.1
RefSeq:NP_973416.1 UniGene:At.14524 ProteinModelPortal:Q9SI09
SMR:Q9SI09 STRING:Q9SI09 PaxDb:Q9SI09 PRIDE:Q9SI09
EnsemblPlants:AT2G04240.1 EnsemblPlants:AT2G04240.2 GeneID:814962
KEGG:ath:AT2G04240 TAIR:At2g04240 eggNOG:NOG275580
InParanoid:Q9SI09 OMA:CRHRLLP PhylomeDB:Q9SI09
ProtClustDB:CLSN2683970 ArrayExpress:Q9SI09 Genevestigator:Q9SI09
Uniprot:Q9SI09
Length = 162
Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 251 ETFRNFRI-RVADYVR-YRKITSNMNDRFPDASPEELDASDSTCIICREEM---TTAKKL 305
E+F +FR+ + Y+ +R T + RF + A D+ C +C + + KL
Sbjct: 64 ESF-DFRVCQPESYLEEFRNRTPTL--RFESLCRCKKQA-DNECSVCLSKFQGDSEINKL 119
Query: 306 ICGHLFHVHCLRSWLERQH-TCPTCRA-LVVPPENGASTAGV 345
CGHLFH CL W++ + TCP CR LVV PE+ ++ V
Sbjct: 120 KCGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDHQLSSNV 161
>ZFIN|ZDB-GENE-040426-1024 [details] [associations]
symbol:rnf181 "ring finger protein 181"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 ZFIN:ZDB-GENE-040426-1024 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
GeneTree:ENSGT00530000062967 CTD:51255 HOGENOM:HOG000031081
HOVERGEN:HBG108412 OMA:EEQYRQN OrthoDB:EOG40VVQW EMBL:CU041374
EMBL:BC050161 IPI:IPI00492404 IPI:IPI00890554 RefSeq:NP_956600.1
UniGene:Dr.84789 ProteinModelPortal:Q7ZW78 STRING:Q7ZW78
Ensembl:ENSDART00000029450 Ensembl:ENSDART00000134728
Ensembl:ENSDART00000140392 GeneID:393276 KEGG:dre:393276
InParanoid:Q7ZW78 NextBio:20814333 Bgee:Q7ZW78 Uniprot:Q7ZW78
Length = 156
Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 281 SPEELDASDS--TCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
SPE+ D C++ EE + +++ C HLFH C+ WL + ++CP CR L +P +N
Sbjct: 69 SPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCR-LELPTDN 127
>WB|WBGene00022502 [details] [associations]
symbol:ZC13.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG329292 GeneTree:ENSGT00390000014213
EMBL:FO081302 GeneID:180437 KEGG:cel:CELE_ZC13.1 CTD:180437
RefSeq:NP_001024970.1 ProteinModelPortal:Q7JNM2 SMR:Q7JNM2
PaxDb:Q7JNM2 PRIDE:Q7JNM2 EnsemblMetazoa:ZC13.1b UCSC:ZC13.1b
WormBase:ZC13.1b HOGENOM:HOG000018464 InParanoid:Q7JNM2 OMA:DFEFSNT
NextBio:909368 ArrayExpress:Q7JNM2 Uniprot:Q7JNM2
Length = 398
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/165 (26%), Positives = 76/165 (46%)
Query: 179 YMILATTT----VSIFVK-YVFYVSDMLMEGQWERKAVYTF-YL-ELIRDLLHLSMYLCF 231
Y ++ T T ++I K + V D + ++RK + Y +L R L +L
Sbjct: 219 YGVVMTDTFFKLITILPKSLIVIVPDTYVTTSFKRKVLQLLEYCSQLYRCALPFGPWLRH 278
Query: 232 FLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYR-KITSNMNDRFPDAS--PEELDAS 288
FL GV ++ Y F ++V + RY + ++ + D+S + +D
Sbjct: 279 FLFSNPGSGVMIYFFSISY-----FSLKVGEVYRYSLSVKKSVGNLLTDSSVGTKSVDHE 333
Query: 289 DSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333
+ C +C ++ KL C H+F C+ +WL+++ TCP CRA V
Sbjct: 334 EQPCAVCHGDLLQPIKLECTHVFCKFCIETWLDQKSTCPICRAEV 378
>UNIPROTKB|Q8WU17 [details] [associations]
symbol:RNF139 "E3 ubiquitin-protein ligase RNF139"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031396 "regulation of protein
ubiquitination" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0016874 "ligase activity" evidence=TAS]
[GO:0017148 "negative regulation of translation" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IMP;IDA] [GO:0019787 "small conjugating protein ligase
activity" evidence=IDA] [GO:0070613 "regulation of protein
processing" evidence=IDA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005783 GO:GO:0016021 GO:GO:0008285
EMBL:CH471060 GO:GO:0017148 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 GO:GO:0004872 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0031396 GO:GO:0060628 Orphanet:151 MIM:144700
GO:GO:0070613 EMBL:AF064800 EMBL:AF064801 EMBL:AK001602
EMBL:BC021571 EMBL:BC064636 IPI:IPI00289584 RefSeq:NP_009149.2
UniGene:Hs.730771 ProteinModelPortal:Q8WU17 SMR:Q8WU17
IntAct:Q8WU17 STRING:Q8WU17 PhosphoSite:Q8WU17 DMDM:74760542
PaxDb:Q8WU17 PRIDE:Q8WU17 Ensembl:ENST00000303545 GeneID:11236
KEGG:hsa:11236 UCSC:uc003yrc.3 CTD:11236 GeneCards:GC08P125487
HGNC:HGNC:17023 HPA:HPA001202 MIM:603046 neXtProt:NX_Q8WU17
PharmGKB:PA134945850 eggNOG:NOG246550 HOGENOM:HOG000267029
HOVERGEN:HBG053146 InParanoid:Q8WU17 KO:K15703 OMA:RIRFPDI
OrthoDB:EOG4H4638 PhylomeDB:Q8WU17 GenomeRNAi:11236 NextBio:42766
ArrayExpress:Q8WU17 Bgee:Q8WU17 CleanEx:HS_RNF139
Genevestigator:Q8WU17 GermOnline:ENSG00000170881 InterPro:IPR025754
Pfam:PF13705 Uniprot:Q8WU17
Length = 664
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 70/312 (22%), Positives = 122/312 (39%)
Query: 42 SLVLLMNMGLVIMCILWQLIKKV--FLGSLREAEVERLNEQSRRE--IMEILFAITIFRQ 97
S + ++ M VI + L + F+GS E + RL + I+ + ++ R
Sbjct: 287 STLTVLGMSAVISSVAHYLGLGILAFIGSTEEDD-RRLGFVAPVLFFILALQTGLSGLRP 345
Query: 98 DFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSF--LLLVDS-L 154
+ + L+ LLL LH++ + T P + LS + SF +L V + L
Sbjct: 346 EERLIRLSRNMCLLLTAVLHFI------HGMTDPVLMSLSASHVSSFRRHFPVLFVSACL 399
Query: 155 FLYSSV-KFLLQTRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKA 210
F+ + ++L A + F+ F + VS+ V Y ++ D WE+
Sbjct: 400 FILPVLLSYVLWHHYALNTWLFAVTAFCVELCLKVIVSLTV-YTLFMIDGYYNVLWEKLD 458
Query: 211 VYTFYLELIRDLLHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD---- 262
Y +Y+ ++ + F + G + + N ++ +
Sbjct: 459 DYVYYVRSTGSIIEFIFGVVMFGNGAYTMMFESGSKIRAFMMCLHAYFNIYLQAKNGWKT 518
Query: 263 YVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLE 321
++ R +N P+ L + C IC E TT+ ++ C H FH CLR WL
Sbjct: 519 FMNRRTAVKKINS-LPEIKGSRLQEINDVCAICYHEFTTSARITPCNHYFHALCLRKWLY 577
Query: 322 RQHTCPTCRALV 333
Q TCP C V
Sbjct: 578 IQDTCPMCHQKV 589
>FB|FBgn0026878 [details] [associations]
symbol:CG4325 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0002805
"regulation of antimicrobial peptide biosynthetic process"
evidence=IMP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 EMBL:AE014298 GO:GO:0008270
EMBL:AL031765 ChiTaRS:Actn Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0002805 EMBL:BT132862 PIR:T13738 RefSeq:NP_569969.1
SMR:Q9XZS4 DIP:DIP-17855N IntAct:Q9XZS4 MINT:MINT-343565
EnsemblMetazoa:FBtr0070342 EnsemblMetazoa:FBtr0310443 GeneID:31167
KEGG:dme:Dmel_CG4325 UCSC:CG4325-RA FlyBase:FBgn0026878
InParanoid:Q9XZS4 OMA:CTICSER OrthoDB:EOG479CQF GenomeRNAi:31167
NextBio:772261 Uniprot:Q9XZS4
Length = 158
Score = 117 (46.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 292 CIICREEMTTAKKL---ICGHLFHVHCLRSWLERQHTCPTCRA-------LVVPPENGAS 341
C IC E T+ + CGH FH CL W ++ TCP CR+ L + E
Sbjct: 8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRSQDAAYFQLYLDFEEFPE 67
Query: 342 TAGVQHGQRPDTHQSGTATANTASQGSANDAANNN 376
+A Q G ++S +++++S S N+ +N+N
Sbjct: 68 SASAQGGSWGGHNRSQGHSSSSSSCSSNNNNSNDN 102
>TAIR|locus:1009023242 [details] [associations]
symbol:AT3G60966 "AT3G60966" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:DQ487553 IPI:IPI00656861
RefSeq:NP_001030907.1 UniGene:At.70726 UniGene:At.73258
ProteinModelPortal:Q1G3N1 SMR:Q1G3N1 EnsemblPlants:AT3G60966.1
GeneID:3769752 KEGG:ath:AT3G60966 TAIR:At3g60966 OMA:CEYITVS
PhylomeDB:Q1G3N1 Genevestigator:Q2V3M4 Uniprot:Q1G3N1
Length = 139
Score = 117 (46.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 283 EELDASDSTCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
E D+S C +C +E +K+ IC H FH C+ +WL CP CRA + PP
Sbjct: 53 ENDDSSPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQI-PPLP 111
Query: 339 GAS 341
AS
Sbjct: 112 PAS 114
>TAIR|locus:2038766 [details] [associations]
symbol:RHA2B "RING-H2 finger protein 2B" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC006200
HOGENOM:HOG000090787 KO:K16282 ProtClustDB:CLSN2679440
EMBL:AF078823 IPI:IPI00526074 PIR:C84421 PIR:T51843
RefSeq:NP_565253.1 UniGene:At.21443 ProteinModelPortal:Q9ZU51
SMR:Q9ZU51 IntAct:Q9ZU51 STRING:Q9ZU51 EnsemblPlants:AT2G01150.1
GeneID:814644 KEGG:ath:AT2G01150 GeneFarm:4093 TAIR:At2g01150
eggNOG:NOG328417 InParanoid:Q9ZU51 OMA:YRYSDNA PhylomeDB:Q9ZU51
Genevestigator:Q9ZU51 GermOnline:AT2G01150 Uniprot:Q9ZU51
Length = 147
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 241 VPLHLIRELYETFRNFR--IRVADYVRYRKITSNMNDRFPDASPEEL------DASDSTC 292
+PL L+ L FR+ R + +TSN++ + L D + S C
Sbjct: 15 IPLMLLALLATFFRHVRSLLLFPSSAPVVVVTSNLSVLADQLNLNRLFSYRYSDNAASDC 74
Query: 293 IICREEMTTA---KKLICGHLFHVHCLRSWLERQH-TCPTCRALVVP 335
I+C ++ T +KL C H+FH CL WL+ + CP CR+ ++P
Sbjct: 75 IVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLP 121
>ZFIN|ZDB-GENE-080401-4 [details] [associations]
symbol:rnf139 "ring finger protein 139" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-080401-4
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 CTD:11236 eggNOG:NOG246550
HOGENOM:HOG000267029 HOVERGEN:HBG053146 KO:K15703 OMA:RIRFPDI
OrthoDB:EOG4H4638 InterPro:IPR025754 Pfam:PF13705 EMBL:CABZ01067086
EMBL:BC160659 IPI:IPI00613494 RefSeq:NP_001116520.1
UniGene:Dr.119244 STRING:B1H1M0 Ensembl:ENSDART00000053622
Ensembl:ENSDART00000122054 Ensembl:ENSDART00000129713
GeneID:100144552 KEGG:dre:100144552 NextBio:20791441 Uniprot:B1H1M0
Length = 664
Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 58/241 (24%), Positives = 96/241 (39%)
Query: 110 LLLIKALHWLAQKRVEYIETTPTVPLLS--HIRIVSFMSFLLLVDSLFLYSS---VKFLL 164
LLL LH++ + T P + LS H+ V +LLV SL L++ + FLL
Sbjct: 348 LLLTAILHFI------HGMTDPVLMSLSASHVSSVRRHVPVLLV-SLVLFTLPVLLSFLL 400
Query: 165 QTRQASVSLFFS---FEYMILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRD 221
A + F+ F + VS+ V Y ++ D WE+ Y +Y+ +
Sbjct: 401 WHHYALNTWLFAVTAFCIELCLKVLVSLTV-YALFMMDGFYNVLWEKLDDYVYYVRSTGN 459
Query: 222 LLHLSMYLCFF----LVIFMNYGVPLHLIRELYETFRNFRIRVAD----YVRYRKITSNM 273
++ + F + G + + N ++ + ++ R +
Sbjct: 460 VIEFIFGVIMFGNGAYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKTFINRRTAVKKI 519
Query: 274 NDRFPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCRAL 332
N P+ L + C IC +E ++ ++ C H FH CLR WL Q TCP C
Sbjct: 520 NS-LPEVRGSRLRDIEDVCAICYQEFGSSARITPCSHYFHALCLRKWLYIQDTCPMCHQR 578
Query: 333 V 333
V
Sbjct: 579 V 579
>TAIR|locus:2120963 [details] [associations]
symbol:AT4G38140 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0031225 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL035538
EMBL:AL161593 EMBL:BT030074 IPI:IPI00538986 PIR:T05641
RefSeq:NP_195527.1 UniGene:At.64216 ProteinModelPortal:Q9SZL4
SMR:Q9SZL4 PaxDb:Q9SZL4 EnsemblPlants:AT4G38140.1 GeneID:829970
KEGG:ath:AT4G38140 TAIR:At4g38140 eggNOG:NOG278117
HOGENOM:HOG000034173 InParanoid:Q9SZL4 OMA:HINCIEP PhylomeDB:Q9SZL4
ProtClustDB:CLSN2915825 Genevestigator:Q9SZL4 Uniprot:Q9SZL4
Length = 145
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 277 FPDASPEELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQH-TCPTCRA 331
F D EE + C IC E + C HLFH++C+ WL R H TCP CR+
Sbjct: 51 FGDKEKEE----EICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRS 106
Query: 332 LVVPP 336
V+ P
Sbjct: 107 FVLAP 111
>DICTYBASE|DDB_G0267718 [details] [associations]
symbol:DDB_G0267718 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0267718
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000003
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG329292 RefSeq:XP_647253.1 ProteinModelPortal:Q55GD1
EnsemblProtists:DDB0189490 GeneID:8616058 KEGG:ddi:DDB_G0267718
InParanoid:Q55GD1 Uniprot:Q55GD1
Length = 592
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVV 334
A+P++++A+ C ICR + + L C H++ +C+ +WLER+ TCP CR ++
Sbjct: 519 ATPDQINAAGDLCSICRSSLVSPIVLRCNHIYCENCVSTWLERERTCPLCRCSIL 573
>POMBASE|SPAP32A8.03c [details] [associations]
symbol:SPAP32A8.03c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPAP32A8.03c Prosite:PS00518 EMBL:CU329670 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HSSP:Q9H0F5 eggNOG:NOG235630 RefSeq:NP_594179.1
ProteinModelPortal:Q9C1X4 EnsemblFungi:SPAP32A8.03c.1
GeneID:2542072 KEGG:spo:SPAP32A8.03c OMA:DIISQLM OrthoDB:EOG4GTPPN
NextBio:20803145 Uniprot:Q9C1X4
Length = 513
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/108 (34%), Positives = 49/108 (45%)
Query: 282 PEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALVVP--- 335
P+EL + C IC E +I C H FH +C++ WL TC CRA V P
Sbjct: 386 PKELIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPNSQ 445
Query: 336 PENGASTAGVQHGQRPDTHQS-GTATAN----TASQGSANDAANNNLT 378
N ST +G P H + T+T N T S N A+ +NL+
Sbjct: 446 QRNNTSTDSA-NGHNPSNHANPSTSTTNDQGATLRNESFNAASQSNLS 492
>ZFIN|ZDB-GENE-120215-234 [details] [associations]
symbol:si:ch211-155d24.7 "si:ch211-155d24.7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-120215-234 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BX005314
RefSeq:XP_690894.2 ProteinModelPortal:I3ISG0
Ensembl:ENSDART00000150920 GeneID:562414 KEGG:dre:562414
GeneTree:ENSGT00530000067036 Bgee:I3ISG0 Uniprot:I3ISG0
Length = 221
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 276 RFPDASPEELDASDSTCIICREEMTTA----KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
RF + + +DS C+IC +++ ++L C H FH C+ WL + TCPTC
Sbjct: 144 RFRSRNVMSMSDADSLCLICHDDLRKGGGVIRELHCSHSFHSECIEEWLWTKQTCPTCHK 203
Query: 332 LVVPPE 337
V PE
Sbjct: 204 HVAMPE 209
>TAIR|locus:2053776 [details] [associations]
symbol:AT2G42350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005956
EMBL:BT010853 EMBL:BT011323 IPI:IPI00542284 PIR:H84852
RefSeq:NP_181764.1 UniGene:At.42716 ProteinModelPortal:Q9SLC4
SMR:Q9SLC4 EnsemblPlants:AT2G42350.1 GeneID:818836
KEGG:ath:AT2G42350 TAIR:At2g42350 eggNOG:NOG298426
HOGENOM:HOG000034168 InParanoid:Q9SLC4 OMA:VAGTECA PhylomeDB:Q9SLC4
ProtClustDB:CLSN2683918 Genevestigator:Q9SLC4 GermOnline:AT2G42350
Uniprot:Q9SLC4
Length = 217
Score = 112 (44.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 286 DASDSTCIICR---EEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCRALVVP 335
D + + C +C EE A+ L C H+FHV C+ +WL Q TCP CR P
Sbjct: 94 DVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEP 147
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 137 SHIRIVSFMSFLLLVDSLFLYSS-VKFLLQTRQASVSLFFS 176
S I +V+ +SF +++ +F+Y KF+L R A L FS
Sbjct: 26 SKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRRSAFQDLSFS 66
Score = 42 (19.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 27 RQFYP-SMVYLSTSKISLVLLMNMGLVIMCI-LWQLIKKVFL 66
R F+ S Y ++SKI LV ++ ++I+ + ++ L K L
Sbjct: 13 RSFWQNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVL 54
>TAIR|locus:2122348 [details] [associations]
symbol:AT4G09100 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000237642 EMBL:AL161514 EMBL:DQ059117
EMBL:BT024815 IPI:IPI00531797 PIR:B85092 RefSeq:NP_192649.1
UniGene:At.54223 ProteinModelPortal:Q9M0R7 SMR:Q9M0R7
EnsemblPlants:AT4G09100.1 GeneID:826488 KEGG:ath:AT4G09100
TAIR:At4g09100 eggNOG:NOG246260 InParanoid:Q9M0R7 OMA:IGELECV
PhylomeDB:Q9M0R7 ProtClustDB:CLSN2915828 Genevestigator:Q9M0R7
GermOnline:AT4G09100 Uniprot:Q9M0R7
Length = 132
Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 277 FPDASPEELDASDSTCIICREEMTTAK--KLI--CGHLFHVHCLRSWLERQHTCPTCRAL 332
+ +A E + C++C E + +L+ C H+FH C+ WL TCP CRA
Sbjct: 70 YTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAK 129
Query: 333 VVP 335
VVP
Sbjct: 130 VVP 132
>TAIR|locus:2034934 [details] [associations]
symbol:AT1G18770 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC011809
eggNOG:NOG268870 IPI:IPI00542029 RefSeq:NP_173312.1
UniGene:At.51668 ProteinModelPortal:Q3ED97 SMR:Q3ED97
EnsemblPlants:AT1G18770.1 GeneID:838459 KEGG:ath:AT1G18770
TAIR:At1g18770 HOGENOM:HOG000131773 InParanoid:Q3ED97 OMA:NAKIDGY
PhylomeDB:Q3ED97 ProtClustDB:CLSN2914190 Genevestigator:Q3ED97
Uniprot:Q3ED97
Length = 106
Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 292 CIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCR 330
CIIC EE + ++++ CGH F C+ W E H+CP CR
Sbjct: 59 CIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCR 100
>TAIR|locus:2124695 [details] [associations]
symbol:AT4G10150 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG238959
HOGENOM:HOG000006232 ProtClustDB:CLSN2685663 EMBL:AF096373
EMBL:AL049487 EMBL:AL161516 EMBL:AY122914 IPI:IPI00517691
PIR:T04065 RefSeq:NP_192753.1 UniGene:At.33650
ProteinModelPortal:Q9SN28 SMR:Q9SN28 EnsemblPlants:AT4G10150.1
GeneID:826606 KEGG:ath:AT4G10150 TAIR:At4g10150 InParanoid:Q9SN28
OMA:ICFTFIV PhylomeDB:Q9SN28 Genevestigator:Q9SN28
GermOnline:AT4G10150 Uniprot:Q9SN28
Length = 236
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/165 (24%), Positives = 69/165 (41%)
Query: 226 SMYLCF-FLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRK--------ITSNMNDR 276
S+ +CF F+V+F+ Y + L + + +R +V ++ ++ +
Sbjct: 35 SVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNNLSTAELGLSKDIREM 94
Query: 277 FPDAS-PEELDASDSTCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRA 331
P E DS C +C + +KL CGH FH+ C+ WL TCP CR
Sbjct: 95 LPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRL 154
Query: 332 LVVP-PENGASTAGVQHGQRPDTHQSGTATANTASQGSANDAANN 375
++P P S + + G A+ SQ SA +A ++
Sbjct: 155 SLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQ-SATEAISH 198
>TAIR|locus:2124700 [details] [associations]
symbol:AT4G10160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:NOG302028
HOGENOM:HOG000006232 ProtClustDB:CLSN2685663 EMBL:DQ059118
EMBL:AF096373 EMBL:AL049487 EMBL:AL161516 EMBL:AY122915
IPI:IPI00532160 PIR:T04066 RefSeq:NP_192754.1 UniGene:At.33649
ProteinModelPortal:Q9SN27 SMR:Q9SN27 IntAct:Q9SN27
EnsemblPlants:AT4G10160.1 GeneID:826607 KEGG:ath:AT4G10160
TAIR:At4g10160 InParanoid:Q9SN27 PhylomeDB:Q9SN27
Genevestigator:Q9SN27 Uniprot:Q9SN27
Length = 225
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 283 EELDASDSTCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVP-PE 337
E +D+ C +C + +KL CGH FH+ C+ WL TCP CR ++P P
Sbjct: 88 ESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPS 147
Query: 338 NGASTAGVQHGQRPDTHQSGTATANTASQGSANDA 372
S ++ + G A+ SQ SA +A
Sbjct: 148 VDLSHQSIEIVSSIENTNGGEASTQPDSQ-SATEA 181
>TAIR|locus:2139044 [details] [associations]
symbol:AT4G12190 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00546160 RefSeq:NP_192956.1 UniGene:At.65368
ProteinModelPortal:F4JQK3 SMR:F4JQK3 DNASU:826827
EnsemblPlants:AT4G12190.1 GeneID:826827 KEGG:ath:AT4G12190
OMA:PRDITRM Uniprot:F4JQK3
Length = 71
Score = 108 (43.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 283 EELDASDSTCIICREEMTTAKK------LICGHLFHVHCLRSWLERQHTCPTCR 330
+ L C IC E + + K + C H+FH CL WL+R++TCP CR
Sbjct: 13 KSLKMETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCR 66
>TAIR|locus:2102569 [details] [associations]
symbol:RZF1 "AT3G56580" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:1902006 "negative regulation of
proline biosynthetic process" evidence=IMP] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG235630
KO:K11982 HOGENOM:HOG000237766 ProtClustDB:CLSN2688851
EMBL:AY045983 EMBL:AY096613 EMBL:DQ059114 IPI:IPI00530247
RefSeq:NP_001030874.1 RefSeq:NP_567039.1 RefSeq:NP_974448.1
UniGene:At.26186 ProteinModelPortal:Q94AK4 SMR:Q94AK4 STRING:Q94AK4
EnsemblPlants:AT3G56580.1 EnsemblPlants:AT3G56580.2
EnsemblPlants:AT3G56580.3 GeneID:824825 KEGG:ath:AT3G56580
TAIR:At3g56580 InParanoid:Q94AK4 OMA:AYYNETA PhylomeDB:Q94AK4
ArrayExpress:Q94AK4 Genevestigator:Q94AK4 Uniprot:Q94AK4
Length = 320
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 283 EELDASDSTCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
+ L +SDS C +C++E + AK++ C H++H C+ WL + ++CP CR + P G
Sbjct: 177 KHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL--PSRG 234
Query: 340 ASTAGVQHGQRPDTH 354
+S++ Q Q T+
Sbjct: 235 SSSS-TQSSQNRSTN 248
>RGD|1594062 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10116 "Rattus
norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005637
"nuclear inner membrane" evidence=IEA] [GO:0005765 "lysosomal
membrane" evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=ISO;ISS] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1594062 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865
GO:GO:0005637 HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:BC081881
IPI:IPI00471874 RefSeq:NP_001102914.1 UniGene:Rn.17153
ProteinModelPortal:Q66HG0 GeneID:681578 KEGG:rno:681578
UCSC:RGD:1594062 NextBio:721179 Genevestigator:Q66HG0
Uniprot:Q66HG0
Length = 380
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 218 LIRDL-LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDR 276
L+ +L L L YL FL+I G+ L LI ++ + + R + R ++ + +
Sbjct: 172 LVPELSLPLEYYLIPFLIIV---GICLILI-VIFMITKFVQDRHRN--RRNRLRKDQLKK 225
Query: 277 FPDASPEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER-QHTCPTCRAL 332
P ++ D D C IC EE KL C H +H C+ WL + + TCP C+
Sbjct: 226 LPVHKFKKGDEYD-VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQK 284
Query: 333 VVPPE--NGASTAGVQHGQRPDTHQS---GTATANTASQGSANDAANNNLT 378
VVP + + + T Q + H +A+A T S GS +++ ++++T
Sbjct: 285 VVPSQGDSDSDTDSSQEENQVSEHTPLLPPSASARTQSFGSLSESHSHHMT 335
>MGI|MGI:1346341 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1346341 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005829 GO:GO:0031902 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637 EMBL:CH466530
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 CTD:11342 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB EMBL:AF037205 EMBL:AF037206 EMBL:AK158046
EMBL:BC058182 IPI:IPI00119961 IPI:IPI00420831 RefSeq:NP_001106884.1
RefSeq:NP_036013.1 UniGene:Mm.274360 ProteinModelPortal:O54965
SMR:O54965 PhosphoSite:O54965 PRIDE:O54965
Ensembl:ENSMUST00000041826 GeneID:24017 KEGG:mmu:24017
eggNOG:NOG260066 InParanoid:Q6PEA8 NextBio:303955 Bgee:O54965
CleanEx:MM_RNF13 Genevestigator:O54965
GermOnline:ENSMUSG00000036503 Uniprot:O54965
Length = 381
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/175 (28%), Positives = 84/175 (48%)
Query: 215 YLELIRDL-LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNM 273
++ L+ +L L L YL FL+I G+ L LI ++ + + R + R ++ +
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIV---GICLILI-VIFMITKFVQDRHRN--RRNRLRKDQ 222
Query: 274 NDRFPDASPEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER-QHTCPTC 329
+ P ++ D D C IC EE KL C H +H C+ WL + + TCP C
Sbjct: 223 LKKLPVHKFKKGDEYD-VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVC 281
Query: 330 RALVVPPE--NGASTAGVQHGQRPDTHQS---GTATANTASQGSANDA-ANNNLT 378
+ VVP + + + T Q + H +A+A T S GS +++ +++N+T
Sbjct: 282 KQKVVPSQGDSDSDTDSSQEENQVSEHTPLLPPSASARTQSFGSLSESHSHHNMT 336
>POMBASE|SPBC2A9.04c [details] [associations]
symbol:san1 "sir antagonist" species:4896
"Schizosaccharomyces pombe" [GO:0000209 "protein
polyubiquitination" evidence=IMP] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=ISO] [GO:0006342 "chromatin silencing" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IC] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:1901044 "protein
polyubiquitination involved in nucleus-associated proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPBC2A9.04c Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006342 GO:GO:0004842 GO:GO:0006325 HSSP:Q13049
OrthoDB:EOG40CMSH PIR:T40095 RefSeq:NP_596213.1
ProteinModelPortal:Q9Y7K6 EnsemblFungi:SPBC2A9.04c.1 GeneID:2540480
KEGG:spo:SPBC2A9.04c eggNOG:NOG246952 OMA:HASSNER NextBio:20801607
GO:GO:1901044 Uniprot:Q9Y7K6
Length = 741
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/108 (35%), Positives = 53/108 (49%)
Query: 275 DRFPDASPEELDASDSTCIICREEMTT-----AKKLICGHLFHVHCLRSWLERQHTCPTC 329
D F S ++L D TC IC ++M A K+ CGH+F +CL+ WLE TCP C
Sbjct: 92 DSFEPLSNDQL--MDLTCPICYDDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCPLC 149
Query: 330 RALVVPPENGASTAGVQHGQRPDTHQSGTATANTA-SQGSANDAANNN 376
R VP E S P +H NTA SQ +A++ +++
Sbjct: 150 RK-EVPHETVGSAHPPILFIIPHSHTLRGNQGNTAVSQENASNGVHSD 196
>MGI|MGI:2442859 [details] [associations]
symbol:Rnft2 "ring finger protein, transmembrane 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 MGI:MGI:2442859 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG329292
GeneTree:ENSGT00390000014213 HOGENOM:HOG000237544
HOVERGEN:HBG056546 CTD:84900 OMA:LMCQHVF EMBL:AK046850
EMBL:AK148930 EMBL:BC057302 IPI:IPI00226695 IPI:IPI00652676
RefSeq:NP_001103372.1 RefSeq:NP_766586.2 UniGene:Mm.320042
ProteinModelPortal:Q3UF64 SMR:Q3UF64 PhosphoSite:Q3UF64
PRIDE:Q3UF64 Ensembl:ENSMUST00000117177 Ensembl:ENSMUST00000121369
GeneID:269695 KEGG:mmu:269695 UCSC:uc008zgh.2 UCSC:uc012ecl.1
ChiTaRS:RNFT2 NextBio:392981 Bgee:Q3UF64 CleanEx:MM_RNFT2
Genevestigator:Q3UF64 Uniprot:Q3UF64
Length = 445
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 249 LYETFRNFRI--RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI 306
LY ++F I RV + K+ + A+ ++ + + C IC+ E L+
Sbjct: 340 LYSLCKSFDICGRVGGLRKALKLLCTSQNYGVRATGQQCTEAGAVCAICQAEFRDPMILL 399
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVVPP----ENGASTAGVQ 346
C H+F CL WL+R+ TCP CR++ V ++GA++A +Q
Sbjct: 400 CQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCWKDGATSAHLQ 443
>RGD|1560195 [details] [associations]
symbol:Rnft2 "ring finger protein, transmembrane 2"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1560195 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000014213 OrthoDB:EOG4KSPK1
IPI:IPI00371158 Ensembl:ENSRNOT00000001486 Uniprot:D3ZTN5
Length = 446
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 249 LYETFRNFRI--RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI 306
LY ++F I RV + K+ + A+ ++ + + C IC+ E L+
Sbjct: 341 LYSLCKSFDICGRVGGLRKALKLLCTSQNYGVRATGQQCTEAGAVCAICQAEFRDPMILL 400
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVVPP----ENGASTAGVQ 346
C H+F CL WL+R+ TCP CR++ V ++GA++A +Q
Sbjct: 401 CQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCWKDGATSAHLQ 444
>UNIPROTKB|J9P693 [details] [associations]
symbol:RNFT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
CTD:84900 OMA:LMCQHVF EMBL:AAEX03014711 RefSeq:XP_854047.2
Ensembl:ENSCAFT00000044155 GeneID:611303 KEGG:cfa:611303
Uniprot:J9P693
Length = 448
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 249 LYETFRNFRI--RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI 306
LY ++F I RV + K+ + A+ ++ + TC IC+ E L+
Sbjct: 343 LYSLCKSFDICGRVGGVRKALKLLCTSQNYGVRATGQQCTEAGDTCAICQAEFREPLILM 402
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVVPP----ENGASTAGVQ 346
C H+F CL WL+R+ TCP CR++ V ++GA++A Q
Sbjct: 403 CQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCWKDGATSAHFQ 446
>ZFIN|ZDB-GENE-090313-3 [details] [associations]
symbol:ttc3 "tetratricopeptide repeat domain 3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13639 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00184 ZFIN:ZDB-GENE-090313-3 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00530000063254
EMBL:CU633885 IPI:IPI00962347 Ensembl:ENSDART00000146125
Uniprot:F1QFP2
Length = 1168
Score = 135 (52.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 289 DSTCIICREEMTTAKKLI--CGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
+ CIIC E+M+ + C H FH C++SWL+ Q TCPTCR + PE+
Sbjct: 1102 EDPCIICHEDMSAEDLCVLECRHSFHRECIKSWLKEQSTCPTCREHALLPED 1153
>ZFIN|ZDB-GENE-070209-292 [details] [associations]
symbol:rnf126 "ring finger protein 126"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-070209-292
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC133164 IPI:IPI00833462
RefSeq:NP_001076486.1 UniGene:Dr.83792 ProteinModelPortal:A2RV40
SMR:A2RV40 PRIDE:A2RV40 GeneID:100009648 KEGG:dre:100009648
eggNOG:NOG304683 InParanoid:A2RV40 NextBio:20787826 Bgee:A2RV40
Uniprot:A2RV40
Length = 309
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 292 CIICREEMTTA---KKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHG 348
C +C+E+ + ++L C HLFH C+ WLE+ TCP CR + +G +TA G
Sbjct: 226 CPVCKEDYSAGENVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSL----SGQNTATDPPG 281
Query: 349 QRPDTHQSGTATANTASQGSANDAANNN 376
+ S +++++++S +N+ A NN
Sbjct: 282 LS-GMNFSPSSSSSSSSSSPSNENATNN 308
>TAIR|locus:2131463 [details] [associations]
symbol:AT4G26400 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP] [GO:0000303 "response to
superoxide" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009743 "response to carbohydrate stimulus"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
OMA:RSADNGS HOGENOM:HOG000237766 EMBL:AY099807 EMBL:BT000305
EMBL:AK317517 IPI:IPI00548539 RefSeq:NP_194370.2 RefSeq:NP_849554.1
UniGene:At.45862 ProteinModelPortal:Q8L5Z3 SMR:Q8L5Z3 STRING:Q8L5Z3
EnsemblPlants:AT4G26400.1 EnsemblPlants:AT4G26400.2 GeneID:828746
KEGG:ath:AT4G26400 TAIR:At4g26400 InParanoid:Q8L5Z3
PhylomeDB:Q8L5Z3 ProtClustDB:CLSN2690330 Genevestigator:Q8L5Z3
Uniprot:Q8L5Z3
Length = 356
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 292 CIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHG 348
C IC ++ + AK++ C H FH+ C+ WLE +CP CR +PP++ V
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCR-YELPPDDETKVNPV--- 296
Query: 349 QRPDTHQSGTATANTASQGSANDAANNNLT 378
RP T T N +++ +DA N+N++
Sbjct: 297 -RPRTR---TLEINVSNENVEDDARNSNVS 322
>TAIR|locus:2177866 [details] [associations]
symbol:AT5G41430 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AB006707 HOGENOM:HOG000141530 IPI:IPI00536823
RefSeq:NP_198958.1 UniGene:At.65616 ProteinModelPortal:Q9FN58
SMR:Q9FN58 EnsemblPlants:AT5G41430.1 GeneID:834144
KEGG:ath:AT5G41430 TAIR:At5g41430 eggNOG:NOG301420
InParanoid:Q9FN58 OMA:HEIIRIK PhylomeDB:Q9FN58
ProtClustDB:CLSN2686368 Genevestigator:Q9FN58 Uniprot:Q9FN58
Length = 161
Score = 114 (45.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 25/71 (35%), Positives = 35/71 (49%)
Query: 264 VRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSW 319
+ YR M F D E D + C IC EE+ ++I C H+FH C+ SW
Sbjct: 93 IGYRASIEEME--FKDIEKEGFD--EIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSW 148
Query: 320 LERQHTCPTCR 330
L++ +CP CR
Sbjct: 149 LKQNRSCPNCR 159
>TAIR|locus:4010713762 [details] [associations]
symbol:AT3G20395 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:DQ487563 IPI:IPI00775679 RefSeq:NP_001078194.1
UniGene:At.71273 UniGene:At.8179 ProteinModelPortal:Q1G3M1
SMR:Q1G3M1 EnsemblPlants:AT3G20395.1 GeneID:5008015
KEGG:ath:AT3G20395 TAIR:At3g20395 OMA:MNCIDEW PhylomeDB:Q1G3M1
ProtClustDB:CLSN2920167 Genevestigator:Q1G3M1 Uniprot:Q1G3M1
Length = 223
Score = 123 (48.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 277 FPDASPEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCR 330
F + S + +S S C+ EE +KL CGH FH++C+ WL RQ TCP CR
Sbjct: 159 FYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPICR 213
>TAIR|locus:2154729 [details] [associations]
symbol:AT5G53910 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AB007644 EMBL:DQ059094 IPI:IPI00540264 RefSeq:NP_200202.1
UniGene:At.55536 ProteinModelPortal:Q9FN35 SMR:Q9FN35
EnsemblPlants:AT5G53910.1 GeneID:835474 KEGG:ath:AT5G53910
TAIR:At5g53910 eggNOG:NOG306750 HOGENOM:HOG000152571
InParanoid:Q9FN35 OMA:CIMEWFK PhylomeDB:Q9FN35
ProtClustDB:CLSN2916335 Genevestigator:Q9FN35 Uniprot:Q9FN35
Length = 230
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 195 FYVSDMLMEGQWERKAVYTFYL---ELIRDLLHLSMYLC--FFLVIFMNYGV-PLHLIRE 248
++++D ++ Q YT L +L RDL S C + L +++ V PL+
Sbjct: 67 YFLTDSAVDSQ----DAYTLILKLTQLARDLTSNSFEYCPRYALSVWLTLDVAPLNEYER 122
Query: 249 L--YETFRNFRIRVAD---YVRYRKITS--NMNDRFPDASPEELDASDSTCIICREEMTT 301
Y N R+ Y R +K +S N + R+ E + + C IC +E T
Sbjct: 123 NSEYRPASNLRVGALSRRIYKRKQKTSSIANKSTRYM-RKRETYSSGEYKCAICFQEFKT 181
Query: 302 AKK---LICGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 338
++ L+CGH F C+ W + ++ CP CR +P E+
Sbjct: 182 GREVATLLCGHEFDNKCIMEWFKVRYNCPLCR-FELPRED 220
>UNIPROTKB|I3LA46 [details] [associations]
symbol:I3LA46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 Ensembl:ENSSSCT00000026758 OMA:ITILMIF
Uniprot:I3LA46
Length = 218
Score = 122 (48.0 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 225 LSMYLCFFLVIFMNYGVPLHLI----RELYETFRNFRIRVADYVRYRKITSNMNDRFPDA 280
+ ++L FF+V+ + + L I R + ++ + + RK S R +
Sbjct: 28 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGR-REG 86
Query: 281 SPEELD----ASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALV 333
S LD +S S C IC E+ ++L C H FH C+ WL + HTCP CR +
Sbjct: 87 SCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 146
Query: 334 VPPENGASTAGVQ 346
+ + S V+
Sbjct: 147 IEQKGNPSAMCVE 159
>RGD|1563278 [details] [associations]
symbol:Dzip3 "DAZ interacting protein 3, zinc finger"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1563278 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209
CTD:9666 KO:K10642 OrthoDB:EOG4V1700 GeneTree:ENSGT00530000063254
IPI:IPI00362426 RefSeq:XP_001058877.1 RefSeq:XP_221487.4
PRIDE:D4A1V8 Ensembl:ENSRNOT00000002678 GeneID:303963
KEGG:rno:303963 UCSC:RGD:1563278 NextBio:652380 ArrayExpress:D4A1V8
Uniprot:D4A1V8
Length = 1204
Score = 134 (52.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 286 DASDSTCIICREEMTTAKKLI--CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTA 343
+ + C+IC E +++ + C H FH C+R WL +Q TCPTCR V+ PE
Sbjct: 1138 EEEEEPCVICHENLSSENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLHVLLPEE---FP 1194
Query: 344 GVQHGQRP 351
G +GQ P
Sbjct: 1195 GHPNGQFP 1202
>UNIPROTKB|F1PU33 [details] [associations]
symbol:DZIP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:RLCKYRD GeneTree:ENSGT00530000063254 EMBL:AAEX03016969
Ensembl:ENSCAFT00000016319 Uniprot:F1PU33
Length = 1207
Score = 134 (52.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 286 DASDSTCIICREEMT--TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
D + C+IC E ++ L C H FH C+R WL +Q TCPTCR V+ PE
Sbjct: 1141 DDEEEPCVICHENLSPENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLHVLLPE 1194
>UNIPROTKB|F1SL40 [details] [associations]
symbol:DZIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0019902 "phosphatase binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 OMA:RLCKYRD
GeneTree:ENSGT00530000063254 EMBL:CU915401
Ensembl:ENSSSCT00000013065 Uniprot:F1SL40
Length = 1019
Score = 133 (51.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 283 EELDASDSTCIICREEMT--TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
++ + + C+IC E ++ L C H FH C+R WL +Q TCPTCR V+ PE
Sbjct: 950 DDKEEEEEPCVICHENLSPDNLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLHVLLPE 1006
>ZFIN|ZDB-GENE-040426-2324 [details] [associations]
symbol:rnft1 "ring finger protein, transmembrane
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2324 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:BC066378 IPI:IPI00498796 RefSeq:NP_998393.1 UniGene:Dr.80127
ProteinModelPortal:Q6NZ21 STRING:Q6NZ21 Ensembl:ENSDART00000022484
GeneID:406509 KEGG:dre:406509 CTD:51136 eggNOG:NOG329292
GeneTree:ENSGT00390000014213 HOGENOM:HOG000237544
HOVERGEN:HBG056546 InParanoid:Q6NZ21 OMA:LNPTLDH OrthoDB:EOG412M5F
NextBio:20818085 Bgee:Q6NZ21 Uniprot:Q6NZ21
Length = 419
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPP--- 336
ASP ++ + C IC+ + + L+C H+F C+ WL ++ TCP CR ++
Sbjct: 347 ASPAQIREAGDICPICQADFKQPRVLVCQHIFCEECIAQWLNQERTCPLCRTVITDKVHK 406
Query: 337 -ENGASTAGVQ 346
++GA++A +Q
Sbjct: 407 WKDGATSAHLQ 417
>UNIPROTKB|D4A8S6 [details] [associations]
symbol:Rlim "Protein Rlim" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1559832 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00947970 Ensembl:ENSRNOT00000067009
ArrayExpress:D4A8S6 Uniprot:D4A8S6
Length = 597
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 32/89 (35%), Positives = 40/89 (44%)
Query: 256 FRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFH 312
F + D + R +T D S E DA TC +C E T +KL C H +H
Sbjct: 508 FLLNEDDEDQPRGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYH 566
Query: 313 VHCLRSWLERQHTCPTCRALVVPPENGAS 341
VHC+ WL TCP CR V+ N S
Sbjct: 567 VHCIDRWLSENSTCPICRRAVLSSGNRES 595
>MGI|MGI:1342291 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0060816 "random inactivation of X
chromosome" evidence=ISO;IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1342291
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540
GO:GO:0004842 EMBL:CH466564 KO:K16271 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:AF069992 EMBL:AK013207 EMBL:AK029295 EMBL:AL805911
EMBL:BC012960 IPI:IPI00123915 RefSeq:NP_035406.3 UniGene:Mm.427762
UniGene:Mm.490660 ProteinModelPortal:Q9WTV7 SMR:Q9WTV7
DIP:DIP-46445N STRING:Q9WTV7 PhosphoSite:Q9WTV7 PRIDE:Q9WTV7
Ensembl:ENSMUST00000070705 Ensembl:ENSMUST00000121153 GeneID:19820
KEGG:mmu:19820 UCSC:uc009tzz.1 InParanoid:Q9CYY2 NextBio:297281
Bgee:Q9WTV7 CleanEx:MM_RNF12 Genevestigator:Q9WTV7
GermOnline:ENSMUSG00000056537 Uniprot:Q9WTV7
Length = 600
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 32/89 (35%), Positives = 40/89 (44%)
Query: 256 FRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFH 312
F + D + R +T D S E DA TC +C E T +KL C H +H
Sbjct: 511 FLLNEDDEDQPRGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYH 569
Query: 313 VHCLRSWLERQHTCPTCRALVVPPENGAS 341
VHC+ WL TCP CR V+ N S
Sbjct: 570 VHCIDRWLSENSTCPICRRAVLSSGNRES 598
>RGD|1559832 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060816 "random inactivation of
X chromosome" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1559832 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
eggNOG:COG5540 GO:GO:0004842 EMBL:CH473969 HOVERGEN:HBG009886
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
HOGENOM:HOG000273881 OMA:RNFGESD OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:BC097491 IPI:IPI00362010 RefSeq:NP_001020063.1
RefSeq:XP_003752129.1 UniGene:Rn.85539 Ensembl:ENSRNOT00000003782
GeneID:100910646 GeneID:317241 KEGG:rno:100910646 KEGG:rno:317241
UCSC:RGD:1559832 InParanoid:Q4V889 NextBio:671483
Genevestigator:Q4V889 Uniprot:Q4V889
Length = 603
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 32/89 (35%), Positives = 40/89 (44%)
Query: 256 FRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFH 312
F + D + R +T D S E DA TC +C E T +KL C H +H
Sbjct: 514 FLLNEDDEDQPRGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYH 572
Query: 313 VHCLRSWLERQHTCPTCRALVVPPENGAS 341
VHC+ WL TCP CR V+ N S
Sbjct: 573 VHCIDRWLSENSTCPICRRAVLSSGNRES 601
>TAIR|locus:2062008 [details] [associations]
symbol:AT2G47560 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000034169 ProtClustDB:CLSN2683616 EMBL:AC002535
EMBL:BT003983 EMBL:BT005009 IPI:IPI00533213 PIR:T00428
RefSeq:NP_182278.1 UniGene:At.12430 UniGene:At.66383
ProteinModelPortal:O22255 SMR:O22255 EnsemblPlants:AT2G47560.1
GeneID:819369 KEGG:ath:AT2G47560 TAIR:At2g47560 eggNOG:NOG326521
InParanoid:O22255 OMA:PIENGSK PhylomeDB:O22255
Genevestigator:O22255 GermOnline:AT2G47560 Uniprot:O22255
Length = 227
Score = 122 (48.0 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 282 PEELDASDSTCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCRALVVPP---- 336
PEE + S C+ EE + L CGH FHV C+ +W + TCP CRA V PP
Sbjct: 102 PEEKEEC-SVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVI 160
Query: 337 ENGASTA 343
E G+S++
Sbjct: 161 ETGSSSS 167
>ZFIN|ZDB-GENE-080303-32 [details] [associations]
symbol:zgc:175214 "zgc:175214" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 ZFIN:ZDB-GENE-080303-32 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000004806
HOVERGEN:HBG058899 eggNOG:NOG262552 GeneTree:ENSGT00700000104226
EMBL:CR812943 EMBL:BC159258 IPI:IPI00481280 RefSeq:NP_001108199.1
UniGene:Dr.40552 SMR:B0JZN6 Ensembl:ENSDART00000030435
Ensembl:ENSDART00000137357 GeneID:557610 KEGG:dre:557610
NextBio:20882066 Uniprot:B0JZN6
Length = 155
Score = 111 (44.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 283 EELDASDSTCIICREEMTTAKKL---ICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
++L C +C EE T +L C H FH CL WLE + CP C ++ +N
Sbjct: 81 KKLSLLGQPCAVCLEEFKTRDELGVCPCSHTFHKKCLLKWLEIRSVCPMCNKPIMRLQNP 140
Query: 340 ASTAGVQHGQRPD 352
+ G + Q P+
Sbjct: 141 DAPRGAEGLQDPE 153
>TAIR|locus:2169125 [details] [associations]
symbol:AT5G37250 "AT5G37250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00546985 RefSeq:NP_198541.1 UniGene:At.55185
ProteinModelPortal:F4K5X5 SMR:F4K5X5 EnsemblPlants:AT5G37250.1
GeneID:833699 KEGG:ath:AT5G37250 Uniprot:F4K5X5
Length = 192
Score = 119 (46.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 30/96 (31%), Positives = 46/96 (47%)
Query: 253 FRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAK--KLI---- 306
F + +R D ++++ D EE ++TC IC E+ + + +I
Sbjct: 104 FSSIAVRSTD--TFQRLLEEQTMELTDLGDEE----ETTCSICLEDFSESHDDNIILLPD 157
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGAST 342
C HLFH +C+ WL+RQ +CP CR VP E T
Sbjct: 158 CFHLFHQNCIFEWLKRQRSCPLCRR--VPYEEDLET 191
>WB|WBGene00015639 [details] [associations]
symbol:C09E7.5 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG240767
EMBL:FO080464 GeneTree:ENSGT00530000064787 RefSeq:NP_498443.2
ProteinModelPortal:Q9N5Y9 SMR:Q9N5Y9 EnsemblMetazoa:C09E7.5
GeneID:182451 KEGG:cel:CELE_C09E7.5 UCSC:C09E7.5 CTD:182451
WormBase:C09E7.5 InParanoid:Q9N5Y9 OMA:QSENETM NextBio:917626
Uniprot:Q9N5Y9
Length = 457
Score = 128 (50.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 29/76 (38%), Positives = 36/76 (47%)
Query: 266 YRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER 322
+RK N A ELD D+ C IC EEM K+ I C FH C WL
Sbjct: 379 FRKSPGKNNTVTVSAPSSELD--DTECAICLEEMYNFKETIKCECRRRFHSKCATKWLNE 436
Query: 323 QHTCPTCRALVVPPEN 338
+ CPTCR L++ P +
Sbjct: 437 KRECPTCRKLMLNPSD 452
>TAIR|locus:2177876 [details] [associations]
symbol:AT5G41440 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:KOG0800 EMBL:AB006707
HOGENOM:HOG000141530 IPI:IPI00532498 RefSeq:NP_198959.1
UniGene:At.65617 ProteinModelPortal:Q9FN57 SMR:Q9FN57
EnsemblPlants:AT5G41440.1 GeneID:834145 KEGG:ath:AT5G41440
TAIR:At5g41440 InParanoid:Q9FN57 PhylomeDB:Q9FN57
Genevestigator:Q9FN57 Uniprot:Q9FN57
Length = 124
Score = 105 (42.0 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 283 EELDASDSTCI-ICREEMTTAKKLIC----GHLFHVHCLRSWLERQHTCPTCRALV 333
E+++ D C IC EE +L+C H+FH C+ SW++ CP CR V
Sbjct: 68 EDVEEGDEGCCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICRCSV 123
>TAIR|locus:2195871 [details] [associations]
symbol:AT1G51930 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT015124 EMBL:BT015636
IPI:IPI00533509 RefSeq:NP_175605.1 UniGene:At.64866
ProteinModelPortal:Q6AWX4 SMR:Q6AWX4 EnsemblPlants:AT1G51930.1
GeneID:841621 KEGG:ath:AT1G51930 TAIR:At1g51930 eggNOG:NOG294426
HOGENOM:HOG000141530 InParanoid:Q6AWX4 OMA:EEYEDDH PhylomeDB:Q6AWX4
ProtClustDB:CLSN2914693 Genevestigator:Q6AWX4 Uniprot:Q6AWX4
Length = 132
Score = 105 (42.0 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 283 EELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALV 333
EE C IC EE ++ CGH+FH+ C+ SWL ++ CP+CR V
Sbjct: 71 EEEGGGKRFCPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRSV 125
>UNIPROTKB|F1P0T0 [details] [associations]
symbol:Gga.31202 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0010771 "negative regulation of cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IEA] InterPro:IPR001841
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13639 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 GO:GO:0005739 GO:GO:0005634
GO:GO:0005773 GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0070936 GeneTree:ENSGT00530000063254 OMA:DCEGIIS
GO:GO:0010771 EMBL:AADN02010801 IPI:IPI00576154
Ensembl:ENSGALT00000025859 Uniprot:F1P0T0
Length = 1876
Score = 135 (52.6 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 278 PDASPEELD---ASDSTCIICREEMTTAK-KLICGHLFHVHCLRSWL-ERQHTCPTCRAL 332
P + ++LD +SD C IC +E++ +L CGH FH C+R WL E TCP CR
Sbjct: 1800 PKSKWKKLDYIPSSDDPCTICHDELSRDSCELECGHHFHRECIRKWLKEHSSTCPICRIH 1859
Query: 333 VVPPEN 338
V+ PE+
Sbjct: 1860 VLLPED 1865
>UNIPROTKB|I3LB70 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP340171
Ensembl:ENSSSCT00000030994 Uniprot:I3LB70
Length = 577
Score = 129 (50.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 30/78 (38%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D S E DA TC +C E T +KL C H +HVHC+ WL
Sbjct: 499 RGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 557
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 558 STCPICRRAVLASGNRES 575
>TAIR|locus:2193992 [details] [associations]
symbol:ATL3 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC067754 EMBL:AF132013 EMBL:AC016529 EMBL:BT010140
IPI:IPI00529429 PIR:H96746 RefSeq:NP_177375.1 UniGene:At.11694
UniGene:At.71796 ProteinModelPortal:Q9XF63 SMR:Q9XF63
EnsemblPlants:AT1G72310.1 GeneID:843563 KEGG:ath:AT1G72310
GeneFarm:4970 TAIR:At1g72310 HOGENOM:HOG000034162 InParanoid:Q9XF63
OMA:YAKRYLG PhylomeDB:Q9XF63 ProtClustDB:CLSN2715378
Genevestigator:Q9XF63 GermOnline:AT1G72310 Uniprot:Q9XF63
Length = 324
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 292 CIICREEMTTAKK--LI--CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQH 347
C IC E+ K L+ C H FHV C+ W + TCP CR V+ PE AS+ V+
Sbjct: 127 CSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQ-ASSKRVE- 184
Query: 348 GQRPDTHQSGTATAN 362
Q PD ++ T N
Sbjct: 185 -QVPDNAENAGTTNN 198
>UNIPROTKB|E1BBI7 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:DAAA02072549 IPI:IPI00705444
RefSeq:NP_001179251.1 UniGene:Bt.25074 ProteinModelPortal:E1BBI7
Ensembl:ENSBTAT00000020757 GeneID:539871 KEGG:bta:539871
NextBio:20878271 Uniprot:E1BBI7
Length = 611
Score = 129 (50.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 30/78 (38%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D S E DA TC +C E T +KL C H +HVHC+ WL
Sbjct: 533 RGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 591
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 592 STCPICRRAVLASGNRES 609
>UNIPROTKB|F1RPK6 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132 OMA:RNFGESD
EMBL:CU856210 RefSeq:XP_003135236.1 RefSeq:XP_003360418.1
RefSeq:XP_003484178.1 UniGene:Ssc.9094 Ensembl:ENSSSCT00000013579
GeneID:100511426 GeneID:100738472 KEGG:ssc:100511426
KEGG:ssc:100738472 Uniprot:F1RPK6
Length = 623
Score = 129 (50.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 30/78 (38%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D S E DA TC +C E T +KL C H +HVHC+ WL
Sbjct: 545 RGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 603
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 604 STCPICRRAVLASGNRES 621
>UNIPROTKB|Q9NVW2 [details] [associations]
symbol:RLIM "E3 ubiquitin-protein ligase RLIM" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003714
"transcription corepressor activity" evidence=NAS] [GO:0060816
"random inactivation of X chromosome" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540 GO:GO:0004842
EMBL:CH471104 KO:K16271 EMBL:AF155109 EMBL:AJ271670 EMBL:AK001334
EMBL:AL513007 EMBL:BC013357 IPI:IPI00060628 RefSeq:NP_057204.2
RefSeq:NP_899196.1 UniGene:Hs.653288 ProteinModelPortal:Q9NVW2
SMR:Q9NVW2 IntAct:Q9NVW2 MINT:MINT-233446 STRING:Q9NVW2
PhosphoSite:Q9NVW2 DMDM:143811451 PaxDb:Q9NVW2 PRIDE:Q9NVW2
DNASU:51132 Ensembl:ENST00000332687 Ensembl:ENST00000349225
GeneID:51132 KEGG:hsa:51132 UCSC:uc004ebu.3 CTD:51132
GeneCards:GC0XM073803 HGNC:HGNC:13429 HPA:HPA018895 MIM:300379
neXtProt:NX_Q9NVW2 PharmGKB:PA164725373 HOGENOM:HOG000273881
InParanoid:Q9NVW2 OMA:RNFGESD OrthoDB:EOG48SGSW PhylomeDB:Q9NVW2
ChiTaRS:RLIM GenomeRNAi:51132 NextBio:53967 Bgee:Q9NVW2
CleanEx:HS_RNF12 Genevestigator:Q9NVW2 GermOnline:ENSG00000131263
GO:GO:0060816 Uniprot:Q9NVW2
Length = 624
Score = 129 (50.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 30/78 (38%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D S E DA TC +C E T +KL C H +HVHC+ WL
Sbjct: 546 RGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 605 STCPICRRAVLASGNRES 622
>UNIPROTKB|E2RSZ0 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:AAEX03026523 RefSeq:XP_859444.2
ProteinModelPortal:E2RSZ0 Ensembl:ENSCAFT00000027241 GeneID:491965
KEGG:cfa:491965 NextBio:20864655 Uniprot:E2RSZ0
Length = 625
Score = 129 (50.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 30/78 (38%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D S E DA TC +C E T +KL C H +HVHC+ WL
Sbjct: 547 RGLTKEQIDNLAMRSFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 605
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 606 STCPICRRAVLASGNRES 623
>UNIPROTKB|C9J1C6 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC016753 HOGENOM:HOG000031081
OrthoDB:EOG40VVQW HGNC:HGNC:28037 IPI:IPI00926363
ProteinModelPortal:C9J1C6 SMR:C9J1C6 STRING:C9J1C6
Ensembl:ENST00000441634 ArrayExpress:C9J1C6 Bgee:C9J1C6
Uniprot:C9J1C6
Length = 139
Score = 104 (41.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 292 CIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
C++ EE TA ++ C HLFH C+ WL + ++CP CR
Sbjct: 79 CLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCR 117
>TAIR|locus:2074567 [details] [associations]
symbol:AT3G02340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AC068900 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:BT006207
EMBL:AK227808 IPI:IPI00516786 RefSeq:NP_186883.1 UniGene:At.41149
ProteinModelPortal:Q9FWA5 SMR:Q9FWA5 PaxDb:Q9FWA5
EnsemblPlants:AT3G02340.1 GeneID:821090 KEGG:ath:AT3G02340
TAIR:At3g02340 eggNOG:NOG297375 HOGENOM:HOG000152578
InParanoid:Q9FWA5 OMA:NAINWTA PhylomeDB:Q9FWA5
ProtClustDB:CLSN2685198 Genevestigator:Q9FWA5 Uniprot:Q9FWA5
Length = 409
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 283 EELDASDSTCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCR 330
EELD ++ C +C++EM +K L C H +H C+ WL ++TCP CR
Sbjct: 326 EELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCR 376
>TAIR|locus:2169105 [details] [associations]
symbol:AT5G37230 "AT5G37230" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB017069
HOGENOM:HOG000131725 ProtClustDB:CLSN2686895 IPI:IPI00544463
RefSeq:NP_198539.1 UniGene:At.55183 ProteinModelPortal:Q9FHU1
SMR:Q9FHU1 EnsemblPlants:AT5G37230.1 GeneID:833697
KEGG:ath:AT5G37230 TAIR:At5g37230 InParanoid:Q9FHU1 OMA:ICMEDFS
PhylomeDB:Q9FHU1 Genevestigator:Q9FHU1 Uniprot:Q9FHU1
Length = 208
Score = 119 (46.9 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 35/101 (34%), Positives = 46/101 (45%)
Query: 255 NFRIRVADYVRYRKITSNMNDRFPDASPE---EL----DASDSTCIICREEMTTAK--KL 305
+F +RV V I D F E EL D ++TC IC E+ + + +
Sbjct: 109 SFYVRVTRDVMLPSIVVRSRDMFQRLLEEQTMELTNLGDEEETTCSICMEDFSESHDDNI 168
Query: 306 I----CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGAST 342
I C HLFH C+ WL+RQ +CP CR VP E T
Sbjct: 169 ILLPDCFHLFHQSCIFKWLKRQRSCPLCRR--VPYEEDLET 207
>DICTYBASE|DDB_G0282693 [details] [associations]
symbol:pex10 "peroxisome biogenesis factor 10"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007031 "peroxisome organization"
evidence=IEA;ISS] [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
dictyBase:DDB_G0282693 Prosite:PS00518 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0007031
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 InterPro:IPR017907 eggNOG:COG5574 KO:K13346
OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 RefSeq:XP_640208.2
ProteinModelPortal:Q54S31 EnsemblProtists:DDB0238052 GeneID:8623748
KEGG:ddi:DDB_G0282693 ProtClustDB:CLSZ2430477 Uniprot:Q54S31
Length = 374
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 264 VRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQ 323
++ ++ S +N+ D + + + + C +C E T ICGHLF HC+ W +
Sbjct: 294 IKIEQVDSVINNNNQDQNNNQEEEEEQKCTLCLEVRTHTTATICGHLFCWHCITEWCNNK 353
Query: 324 HTCPTCR 330
CP CR
Sbjct: 354 EQCPVCR 360
>UNIPROTKB|Q641J8 [details] [associations]
symbol:rnf12-a "E3 ubiquitin-protein ligase RNF12-A"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0042787
GO:GO:0000578 EMBL:AB114039 EMBL:BC082339 RefSeq:NP_001082725.1
UniGene:Xl.11908 ProteinModelPortal:Q641J8 GeneID:398680
KEGG:xla:398680 CTD:398680 Xenbase:XB-GENE-866117
HOVERGEN:HBG009886 KO:K16271 Uniprot:Q641J8
Length = 622
Score = 128 (50.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D + E DA TC +C E T +KL C H +H+HC+ WL
Sbjct: 544 RGLTKEQIDNLSTRNFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSEN 602
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 603 STCPICRRAVLVASNRES 620
>FB|FBgn0037705 [details] [associations]
symbol:mura "murashka" species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048149 "behavioral response to ethanol" evidence=IMP]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0007616 "long-term memory" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:AE014297 GO:GO:0008355 GO:GO:0046872 GO:GO:0008270
GO:GO:0007616 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00670000097625 UniGene:Dm.11144 GeneID:41145
KEGG:dme:Dmel_CG9381 CTD:41145 FlyBase:FBgn0037705 GenomeRNAi:41145
NextBio:822398 EMBL:BT125858 RefSeq:NP_731367.2 SMR:Q9VHC2
STRING:Q9VHC2 EnsemblMetazoa:FBtr0082118 UCSC:CG9381-RC
InParanoid:Q9VHC2 OMA:ARLAPCH Uniprot:Q9VHC2
Length = 1173
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 40/144 (27%), Positives = 58/144 (40%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICR---EEMTTA 302
E YE + R+ + + R +T N D+ P +PE + S+C++C E
Sbjct: 1032 ENYEALLSLAERLGE-AKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLL 1090
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTA-GVQHGQRPDTHQSGTATA 361
+ L C H FH C+ WL TCP CR N + GV Q+ A
Sbjct: 1091 RVLPCSHEFHAKCVDKWLRSNRTCPICRG------NASDYFDGVDQQQQSQATAGAAAAL 1144
Query: 362 NTASQGSANDAANNNLTLHQARLQ 385
+ S GSA A + + A Q
Sbjct: 1145 SGTSGGSAGVAGTSEASAATANPQ 1168
>UNIPROTKB|F1S6C0 [details] [associations]
symbol:LOC100620409 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP016256 RefSeq:XP_003357420.1
RefSeq:XP_003357421.1 Ensembl:ENSSSCT00000016632
Ensembl:ENSSSCT00000026015 GeneID:100620318 GeneID:100620409
KEGG:ssc:100620318 KEGG:ssc:100620409 Uniprot:F1S6C0
Length = 141
Score = 103 (41.3 bits), Expect = 0.00010, P = 0.00010
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 279 DASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQHTCPTCRALVVP 335
D S E+++ + C IC + + L C H +H+ C+ WL R TCP CR
Sbjct: 75 DGSQEKMEQEE--CAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADG 132
Query: 336 PE 337
P+
Sbjct: 133 PQ 134
>TAIR|locus:505006488 [details] [associations]
symbol:AT4G17245 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000237642 ProtClustDB:CLSN2714317 EMBL:AY054245
EMBL:AF458337 IPI:IPI00532956 RefSeq:NP_567525.1 UniGene:At.26389
ProteinModelPortal:Q940N3 SMR:Q940N3 EnsemblPlants:AT4G17245.1
GeneID:827437 KEGG:ath:AT4G17245 TAIR:At4g17245 eggNOG:NOG246131
InParanoid:Q940N3 OMA:LERCKHG PhylomeDB:Q940N3
Genevestigator:Q940N3 Uniprot:Q940N3
Length = 166
Score = 113 (44.8 bits), Expect = 0.00010, P = 0.00010
Identities = 27/74 (36%), Positives = 36/74 (48%)
Query: 278 PDASPE-------ELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHT- 325
PDA P L +++ CIIC E L C H FHV+C++ WL H+
Sbjct: 81 PDAPPTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSS 140
Query: 326 CPTCRALVV--PPE 337
CPTCR + PP+
Sbjct: 141 CPTCRTNIFSSPPQ 154
>TAIR|locus:2200610 [details] [associations]
symbol:AT1G26800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC006535
EMBL:AF361638 EMBL:AY052705 EMBL:AY055097 IPI:IPI00539847
RefSeq:NP_564263.1 UniGene:At.15652 ProteinModelPortal:Q9LQX2
SMR:Q9LQX2 STRING:Q9LQX2 EnsemblPlants:AT1G26800.1 GeneID:839223
KEGG:ath:AT1G26800 TAIR:At1g26800 InParanoid:Q9LQX2 OMA:IDAMPIV
PhylomeDB:Q9LQX2 ProtClustDB:CLSN2682926 Genevestigator:Q9LQX2
Uniprot:Q9LQX2
Length = 204
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 279 DASP-EELDASDSTCIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
DA P E+D + C+IC EE T K++ C H FH C+ WL +CP CR
Sbjct: 99 DAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCR 154
>TAIR|locus:2030933 [details] [associations]
symbol:AT1G17970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AF428290
EMBL:AY116963 IPI:IPI00539075 RefSeq:NP_173239.1 UniGene:At.26262
ProteinModelPortal:Q944L9 SMR:Q944L9 IntAct:Q944L9
EnsemblPlants:AT1G17970.1 GeneID:838377 KEGG:ath:AT1G17970
TAIR:At1g17970 InParanoid:Q944L9 OMA:ESEIHRC PhylomeDB:Q944L9
ProtClustDB:CLSN2679891 Genevestigator:Q944L9 Uniprot:Q944L9
Length = 368
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 289 DSTCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCR 330
D C IC++E + L CGH FHVHC++ WL R++ CP C+
Sbjct: 317 DRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361
>UNIPROTKB|F1NRC6 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0060816 "random
inactivation of X chromosome" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 GeneTree:ENSGT00700000104290 OMA:RNFGESD
GO:GO:0060816 EMBL:AADN02013542 IPI:IPI00573322
Ensembl:ENSGALT00000012569 Uniprot:F1NRC6
Length = 593
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 29/78 (37%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D + E DA TC +C E T +KL C H +HVHC+ WL
Sbjct: 515 RGLTKEQIDNLAMRNFGESDAL-KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 573
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 574 STCPICRRAVLASGNRES 591
>UNIPROTKB|Q96EX2 [details] [associations]
symbol:RNFT2 "RING finger and transmembrane
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 EMBL:CH471054 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC083806
eggNOG:NOG329292 HOGENOM:HOG000237544 HOVERGEN:HBG056546
EMBL:AK027533 EMBL:AK093164 EMBL:AC090013 EMBL:BC011878
IPI:IPI00386617 IPI:IPI00797961 IPI:IPI00877637 IPI:IPI00878447
RefSeq:NP_001103373.1 RefSeq:NP_116203.2 UniGene:Hs.437195
ProteinModelPortal:Q96EX2 SMR:Q96EX2 PhosphoSite:Q96EX2
DMDM:143216906 PRIDE:Q96EX2 Ensembl:ENST00000257575
Ensembl:ENST00000392549 GeneID:84900 KEGG:hsa:84900 UCSC:uc001twa.4
UCSC:uc001twc.4 UCSC:uc009zwn.3 CTD:84900 GeneCards:GC12P117176
HGNC:HGNC:25905 neXtProt:NX_Q96EX2 PharmGKB:PA162401944
InParanoid:Q96EX2 OMA:LMCQHVF OrthoDB:EOG4KSPK1 GenomeRNAi:84900
NextBio:75262 ArrayExpress:Q96EX2 Bgee:Q96EX2 CleanEx:HS_RNFT2
Genevestigator:Q96EX2 Uniprot:Q96EX2
Length = 444
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 249 LYETFRNFRI--RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI 306
LY ++F I RV + K+ + A+ ++ + C IC+ E L+
Sbjct: 339 LYSLCKSFDICGRVGGVRKALKLLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILL 398
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVVPP----ENGASTAGVQ 346
C H+F CL WL+R+ TCP CR++ V ++GA++A Q
Sbjct: 399 CQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCWKDGATSAHFQ 442
>UNIPROTKB|F1MN99 [details] [associations]
symbol:RNFT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
CTD:84900 OMA:LMCQHVF EMBL:DAAA02045352 EMBL:DAAA02045353
IPI:IPI00999406 RefSeq:NP_001193796.1 UniGene:Bt.82265
Ensembl:ENSBTAT00000061236 GeneID:787155 KEGG:bta:787155
NextBio:20928293 Uniprot:F1MN99
Length = 449
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 249 LYETFRNFRI--RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI 306
LY ++F I RV + K+ + A+ ++ + C IC+ E L+
Sbjct: 344 LYSLCKSFDICGRVGGVRKALKLLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLVLM 403
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVVPP----ENGASTAGVQ 346
C H+F CL WL+R+ TCP CR++ V ++GA++A Q
Sbjct: 404 CQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCWKDGATSAHFQ 447
>UNIPROTKB|Q07G42 [details] [associations]
symbol:rnf12 "E3 ubiquitin-protein ligase RNF12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000578 "embryonic
axis specification" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
KO:K16271 CTD:51132 HOGENOM:HOG000273881 EMBL:CR762181
RefSeq:NP_001016091.1 UniGene:Str.64802 ProteinModelPortal:Q07G42
STRING:Q07G42 GeneID:548845 KEGG:xtr:548845 Xenbase:XB-GENE-492020
Uniprot:Q07G42
Length = 639
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 29/78 (37%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D + E DA TC +C E T +KL C H +HVHC+ WL
Sbjct: 561 RGLTKEQIDNLSTRNFGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 619
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 620 STCPICRRAVLVAGNRES 637
>ASPGD|ASPL0000035856 [details] [associations]
symbol:AN10394 species:162425 "Emericella nidulans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005680 "anaphase-promoting complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR024991 Pfam:PF12861
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:BN001306 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0005680 HOGENOM:HOG000171951 OMA:CGICRMP
EnsemblFungi:CADANIAT00009679 Uniprot:C8VHR1
Length = 104
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 289 DSTCIICREEMTTAKKLI--CGHLFHVHCLRSWLERQHT---CPTCR 330
D TC C+ L+ CGH FH+HCL +W++++ + CP CR
Sbjct: 32 DGTCPTCKFPGDDCSLLLGKCGHSFHMHCLMTWIQQESSKGLCPMCR 78
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 292 CIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
CIIC E A L C H F +C+ W++R+ CP CR
Sbjct: 53 CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICR 91
>TAIR|locus:2193874 [details] [associations]
symbol:AT1G55530 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC005223
eggNOG:NOG235630 HOGENOM:HOG000237766 EMBL:AY039608 EMBL:AF424578
EMBL:BT000502 IPI:IPI00534528 PIR:F96597 RefSeq:NP_564693.1
UniGene:At.19898 ProteinModelPortal:Q9ZVU8 SMR:Q9ZVU8 STRING:Q9ZVU8
PRIDE:Q9ZVU8 EnsemblPlants:AT1G55530.1 GeneID:842000
KEGG:ath:AT1G55530 TAIR:At1g55530 InParanoid:Q9ZVU8 OMA:FVEEMED
PhylomeDB:Q9ZVU8 ProtClustDB:CLSN2917296 Genevestigator:Q9ZVU8
Uniprot:Q9ZVU8
Length = 351
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 38/120 (31%), Positives = 57/120 (47%)
Query: 267 RKITSNMNDRF--PDASPEELDAS-----DST--CIICREEM---TTAKKLICGHLFHVH 314
+++ N +R+ P A E ++A + T C +C ++ T AK + C H FH
Sbjct: 189 QRLAENDPNRYGTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSD 248
Query: 315 CLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTATANTASQGSANDAAN 374
CL WLE +CP CR + P + A T V D + S +A+A T S G+ N N
Sbjct: 249 CLLPWLELHSSCPVCRYQL--PADEAKTDSVT--TTSDNNGSSSASATT-SHGAENSDGN 303
>UNIPROTKB|Q5Z5F2 [details] [associations]
symbol:LOC_Os06g34450 "E3 ubiquitin-protein ligase
Os06g0535400" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
EMBL:AP008212 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AP005723 EMBL:AK066960 RefSeq:NP_001057791.1
UniGene:Os.5874 ProteinModelPortal:Q5Z5F2
EnsemblPlants:LOC_Os06g34450.1 GeneID:4341214
KEGG:dosa:Os06t0535400-01 KEGG:osa:4341214 Gramene:Q5Z5F2
eggNOG:NOG282486 OMA:CLAGMRE ProtClustDB:CLSN2696222 Uniprot:Q5Z5F2
Length = 251
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 287 ASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVVPP 336
A++ C +C M A+ L CGH FH C+ WL TCP CR VPP
Sbjct: 180 AAEDKCCVCLAGMREAQALRDLPRCGHRFHAKCIGKWLTAHPTCPVCRTTAVPP 233
>MGI|MGI:1917544 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1917544
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC016543 IPI:IPI00130263 RefSeq:NP_653111.1
UniGene:Mm.466670 PDB:2ECT PDBsum:2ECT ProteinModelPortal:Q91YL2
SMR:Q91YL2 PhosphoSite:Q91YL2 PaxDb:Q91YL2 PRIDE:Q91YL2
Ensembl:ENSMUST00000047203 GeneID:70294 KEGG:mmu:70294
InParanoid:Q91YL2 OMA:RSADNGS EvolutionaryTrace:Q91YL2
NextBio:331326 Bgee:Q91YL2 CleanEx:MM_RNF126 Genevestigator:Q91YL2
GermOnline:ENSMUSG00000035890 Uniprot:Q91YL2
Length = 313
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 283 EELDASDSTCIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
EE S C +C+E+ + ++L C HLFH C+ WLE+ +CP CR + G
Sbjct: 222 EEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT----G 277
Query: 340 ASTAGVQHGQRPDTHQSGTATANTASQGSANDAANN 375
+TA G S +++++++S + N +N+
Sbjct: 278 QNTATNPPGLTGVGFSSSSSSSSSSSPSNENATSNS 313
>TAIR|locus:2027804 [details] [associations]
symbol:AT1G73760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC012679 ProtClustDB:CLSN2679891 IPI:IPI00547580 PIR:H96764
RefSeq:NP_177517.1 UniGene:At.27716 ProteinModelPortal:Q9C9T6
SMR:Q9C9T6 EnsemblPlants:AT1G73760.1 GeneID:843711
KEGG:ath:AT1G73760 TAIR:At1g73760 eggNOG:NOG237784
HOGENOM:HOG000077709 InParanoid:Q9C9T6 OMA:SADWDAS PhylomeDB:Q9C9T6
Genevestigator:Q9C9T6 Uniprot:Q9C9T6
Length = 367
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 283 EELDASDSTCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCRAL 332
++ +D CIIC++E + L CGH FH+ C+ WL R+++CP C+ +
Sbjct: 310 QDTTVADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCKTM 362
>UNIPROTKB|Q7T037 [details] [associations]
symbol:rnf12-b "E3 ubiquitin-protein ligase RNF12-B"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
EMBL:AB114040 RefSeq:NP_001108244.1 UniGene:Xl.81512
ProteinModelPortal:Q7T037 GeneID:100137618 KEGG:xla:100137618
CTD:100137618 Xenbase:XB-GENE-6256130 Uniprot:Q7T037
Length = 757
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQ 323
R +T D + E DA TC +C E T +KL C H +H+HC+ WL
Sbjct: 679 RGLTKEQIDNLSTRNYGENDAL-KTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSEN 737
Query: 324 HTCPTCRALVVPPENGAS 341
TCP CR V+ N S
Sbjct: 738 STCPICRRAVLVAGNRES 755
>TAIR|locus:2096309 [details] [associations]
symbol:ATL6 "Arabidopsis toxicos en levadura 6"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0010200 "response to
chitin" evidence=IEP;RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=IEP] [GO:0009816 "defense
response to bacterium, incompatible interaction" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0009816 eggNOG:COG5540 GO:GO:0004842 HOGENOM:HOG000239182
ProtClustDB:CLSN2687102 EMBL:AF132016 EMBL:DQ086860 EMBL:AC009177
EMBL:AY080617 IPI:IPI00538071 RefSeq:NP_566249.1 UniGene:At.22987
ProteinModelPortal:Q8RXX9 SMR:Q8RXX9 STRING:Q8RXX9 PRIDE:Q8RXX9
EnsemblPlants:AT3G05200.1 GeneID:819684 KEGG:ath:AT3G05200
GeneFarm:4974 TAIR:At3g05200 InParanoid:Q8RXX9 OMA:IYVRHCY
PhylomeDB:Q8RXX9 Genevestigator:Q8RXX9 GermOnline:AT3G05200
Uniprot:Q8RXX9
Length = 398
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 277 FPDASPEELDASDSTCIICREEMTTAK--KLI--CGHLFHVHCLRSWLERQHTCPTCRAL 332
+ D ++L + C IC E + +L+ C H+FH HC+ +WLE TCP CRA
Sbjct: 113 YSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRAN 172
Query: 333 VVPPENGASTAGVQHG-QRPD 352
+ E A V+ G PD
Sbjct: 173 LA--EQVAEGESVEPGGTEPD 191
>TAIR|locus:2050522 [details] [associations]
symbol:AT2G44330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0004842 EMBL:AC004521 EMBL:AY074627 EMBL:DQ086854
IPI:IPI00534529 PIR:T02388 RefSeq:NP_181961.1 UniGene:At.28780
ProteinModelPortal:O64867 SMR:O64867 EnsemblPlants:AT2G44330.1
GeneID:819040 KEGG:ath:AT2G44330 TAIR:At2g44330 eggNOG:NOG328670
HOGENOM:HOG000115003 InParanoid:O64867 OMA:QTYWCHE PhylomeDB:O64867
ProtClustDB:CLSN2912974 ArrayExpress:O64867 Genevestigator:O64867
Uniprot:O64867
Length = 180
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 286 DASDSTCIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGAST 342
D S C ICRE+ +A++L C HL+H C+ WL ++CP CR + +P +
Sbjct: 90 DDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCR-VELPVASSEDD 148
Query: 343 AGV 345
+G+
Sbjct: 149 SGL 151
>TAIR|locus:1006230720 [details] [associations]
symbol:AT1G24580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K16285
ProtClustDB:CLSN2681281 EMBL:BT014952 EMBL:BT020604 IPI:IPI00542297
RefSeq:NP_973908.1 UniGene:At.49461 ProteinModelPortal:Q6GKW2
SMR:Q6GKW2 EnsemblPlants:AT1G24580.1 GeneID:2745762
KEGG:ath:AT1G24580 eggNOG:NOG279711 OMA:FQIVASE
Genevestigator:Q6GKW2 Uniprot:Q6GKW2
Length = 113
Score = 101 (40.6 bits), Expect = 0.00017, P = 0.00017
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 262 DYVRYRKITSNMNDRFPDASPEELDASDSTCI-IC--REEMTTAKKLICGHLFHVHCLRS 318
D+V R + + EE + C+ +C +EE ++ + C H FH CL +
Sbjct: 38 DFVTRRISITQFKSLCENIEEEEEEKGVECCVCLCGFKEEEEVSELVSCKHFFHRACLDN 97
Query: 319 WLERQHT-CPTCRALV 333
W HT CP CR+++
Sbjct: 98 WFGNNHTTCPLCRSIL 113
>TAIR|locus:4515102735 [details] [associations]
symbol:AT1G67856 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00891607 RefSeq:NP_001117565.1 UniGene:At.66117
UniGene:At.70659 ProteinModelPortal:B3H543 SMR:B3H543
EnsemblPlants:AT1G67856.1 GeneID:6240476 KEGG:ath:AT1G67856
TAIR:At1g67856 eggNOG:NOG324400 HOGENOM:HOG000242879 KO:K16285
OMA:VSELSCK PhylomeDB:B3H543 ProtClustDB:CLSN2681281
Genevestigator:B3H543 Uniprot:B3H543
Length = 133
Score = 101 (40.6 bits), Expect = 0.00017, P = 0.00017
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 281 SPEELDASDSTCIIC--REEMTTAKKLICGHLFHVHCLRSWLERQHT-CPTCRALV 333
S E +A D +C +EE ++ + C H FH CL W HT CP CR+++
Sbjct: 78 SRNEREAMDCCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPLCRSIL 133
>UNIPROTKB|B4DYE0 [details] [associations]
symbol:RNF44 "cDNA FLJ61466, highly similar to Homo sapiens
ring finger protein 44 (RNF44), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC091934
HOVERGEN:HBG059283 UniGene:Hs.434888 HGNC:HGNC:19180 ChiTaRS:RNF44
EMBL:AC010316 EMBL:AK302385 IPI:IPI01010913 SMR:B4DYE0
Ensembl:ENST00000537487 Uniprot:B4DYE0
Length = 351
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICREEMTTAKKL 305
E YE N R+ D + R +T ++ P +P+ + + C++C + A++L
Sbjct: 254 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFE-ARQL 311
Query: 306 I----CGHLFHVHCLRSWLERQHTCPTCRA 331
+ C H FH C+ WL+ TCP CRA
Sbjct: 312 LRVLPCNHEFHTKCVDKWLKANRTCPICRA 341
>TAIR|locus:2151241 [details] [associations]
symbol:SGR9 "SHOOT GRAVITROPISM 9" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0009501 "amyloplast" evidence=IDA] [GO:0009630
"gravitropism" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0009630
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 HSSP:P38398
GO:GO:0009501 EMBL:BT005552 EMBL:AK118262 IPI:IPI00519960
RefSeq:NP_195895.2 UniGene:At.33371 ProteinModelPortal:Q8GXF8
SMR:Q8GXF8 EnsemblPlants:AT5G02750.1 GeneID:831806
KEGG:ath:AT5G02750 TAIR:At5g02750 eggNOG:NOG310232
HOGENOM:HOG000084017 InParanoid:Q8GXF8 OMA:LARRNTC PhylomeDB:Q8GXF8
ProtClustDB:CLSN2690743 Genevestigator:Q8GXF8 Uniprot:Q8GXF8
Length = 283
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 286 DASDSTCIICREEMTTAK---KLICGHLFHVHCLRSWLERQHTCPTCR 330
+A + C+IC+EEM+ + ++ C H FH C+ WL +++TCP CR
Sbjct: 208 NAGEVECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCR 255
>FB|FBgn0034314 [details] [associations]
symbol:nopo "no poles" species:7227 "Drosophila melanogaster"
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=NAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:AE013599 GO:GO:0007346 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG86944
KO:K11985 GeneTree:ENSGT00390000007696 EMBL:AY060610
RefSeq:NP_611305.1 UniGene:Dm.19955 SMR:Q7K2X1 IntAct:Q7K2X1
STRING:Q7K2X1 EnsemblMetazoa:FBtr0086750 GeneID:37083
KEGG:dme:Dmel_CG5140 UCSC:CG5140-RA CTD:37083 FlyBase:FBgn0034314
InParanoid:Q7K2X1 OMA:PQCRNKC OrthoDB:EOG4ZCRMZ GenomeRNAi:37083
NextBio:801869 Uniprot:Q7K2X1
Length = 435
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 292 CIICREEMTTAKKL---ICGHLFHVHCLRSWLERQHTCPTCR 330
C+IC E A ++ +CGH+FH +CL WL+R TCP CR
Sbjct: 6 CVICAELFGQADEVFATVCGHMFHHNCLNQWLDRSKTCPQCR 47
>TAIR|locus:2173497 [details] [associations]
symbol:AT5G37200 "AT5G37200" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG246550
HOGENOM:HOG000131725 EMBL:AP000605 IPI:IPI00517594
RefSeq:NP_198536.1 UniGene:At.55180 ProteinModelPortal:Q9FG51
SMR:Q9FG51 EnsemblPlants:AT5G37200.1 GeneID:833694
KEGG:ath:AT5G37200 TAIR:At5g37200 InParanoid:Q9FG51
PhylomeDB:Q9FG51 ProtClustDB:CLSN2686890 Genevestigator:Q9FG51
Uniprot:Q9FG51
Length = 217
Score = 110 (43.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 284 ELDASDSTCIICREEMTTAKKLI-----CGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
+L+ D TC IC E+ + + + I C HLFH CL WL Q++CP CR VP E
Sbjct: 151 DLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRK--VPYE 207
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 35 YLSTSKISLVLLMNMGLVIMCILWQLIKKVFLGSLREAEVER--LNEQSRREIMEILFAI 92
Y S + + +L+N + +L QL+ FLG +V+ N+ S R+ + + +
Sbjct: 53 YTSPLETNAHILLNPRRLTRRVLTQLLDDQFLGQKIAHDVKDSFANDNSLRQPVTVTVYV 112
Query: 93 TIFRQ 97
T ++
Sbjct: 113 TYIKE 117
>TAIR|locus:2011686 [details] [associations]
symbol:ATL8 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC012394 eggNOG:COG5540 HOGENOM:HOG000237642
ProtClustDB:CLSN2679434 EMBL:AC015450 EMBL:AK118893 EMBL:BT005559
EMBL:AY086760 IPI:IPI00519939 PIR:G96791 RefSeq:NP_177767.1
UniGene:At.34661 ProteinModelPortal:Q8LC69 SMR:Q8LC69 STRING:Q8LC69
EnsemblPlants:AT1G76410.1 GeneID:843974 KEGG:ath:AT1G76410
TAIR:At1g76410 InParanoid:Q8LC69 OMA:KLVECAI PhylomeDB:Q8LC69
Genevestigator:Q8LC69 GermOnline:AT1G76410 Uniprot:Q8LC69
Length = 185
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 28/83 (33%), Positives = 37/83 (44%)
Query: 278 PDASPEELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALV 333
PD+ P E C IC E +L CGH FHV C+ +WL +CP+CR ++
Sbjct: 93 PDSPPAEKLVE---CAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149
Query: 334 VPP---ENGASTAGVQHGQRPDT 353
V + G G PDT
Sbjct: 150 VVTRCHKCGGLPGSSSSGPEPDT 172
>GENEDB_PFALCIPARUM|PFF1180w [details] [associations]
symbol:PFF1180w "anaphase-promoting complex
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005680
"anaphase-promoting complex" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005680
HOGENOM:HOG000171951 KO:K03358 OMA:CGICRMP InterPro:IPR024766
Pfam:PF12678 EMBL:AL844505 RefSeq:XP_966227.1
ProteinModelPortal:C6KT81 EnsemblProtists:PFF1180w:mRNA
GeneID:3885917 KEGG:pfa:PFF1180w EuPathDB:PlasmoDB:PF3D7_0624500
ProtClustDB:CLSZ2514454 Uniprot:C6KT81
Length = 89
Score = 100 (40.3 bits), Expect = 0.00022, P = 0.00022
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 289 DSTCIICREEMTTAKKLI--CGHLFHVHCLRSWLERQH-TCPTCRA 331
++TC C CGH FH+HC+ W+++ TCP CRA
Sbjct: 34 ENTCTTCMRPGNGCPPAFGKCGHHFHLHCMEKWIKQNKLTCPCCRA 79
>UNIPROTKB|C6KT81 [details] [associations]
symbol:PFF1180w "Anaphase-promoting complex subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005680
"anaphase-promoting complex" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005680
HOGENOM:HOG000171951 KO:K03358 OMA:CGICRMP InterPro:IPR024766
Pfam:PF12678 EMBL:AL844505 RefSeq:XP_966227.1
ProteinModelPortal:C6KT81 EnsemblProtists:PFF1180w:mRNA
GeneID:3885917 KEGG:pfa:PFF1180w EuPathDB:PlasmoDB:PF3D7_0624500
ProtClustDB:CLSZ2514454 Uniprot:C6KT81
Length = 89
Score = 100 (40.3 bits), Expect = 0.00022, P = 0.00022
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 289 DSTCIICREEMTTAKKLI--CGHLFHVHCLRSWLERQH-TCPTCRA 331
++TC C CGH FH+HC+ W+++ TCP CRA
Sbjct: 34 ENTCTTCMRPGNGCPPAFGKCGHHFHLHCMEKWIKQNKLTCPCCRA 79
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 100 (40.3 bits), Expect = 0.00022, P = 0.00022
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 283 EELDASDSTCIICREEMTTAKKL---ICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
++L TC +C E+ +L C H FH CL WLE + CP C + P
Sbjct: 24 KKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPTET 83
Query: 340 ASTAGV 345
+ + G+
Sbjct: 84 SQSIGI 89
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 100 (40.3 bits), Expect = 0.00022, P = 0.00022
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 283 EELDASDST-CIICREEMTTAKKLICGHLFHVHCLRSWLE---RQHTCPTCRALV 333
EE DAS++ C IC E +CGHLF CL WL + + CP C+ALV
Sbjct: 9 EEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALV 63
>RGD|1562411 [details] [associations]
symbol:Rnft1 "ring finger protein, transmembrane 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1562411 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000014213 OMA:LNPTLDH
OrthoDB:EOG412M5F IPI:IPI00372673 RefSeq:XP_003750947.1
RefSeq:XP_003752412.1 Ensembl:ENSRNOT00000005064 GeneID:360595
KEGG:rno:360595 CTD:360595 Uniprot:D3ZG84
Length = 397
Score = 112 (44.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333
AS + D C IC+ E L C H+F C+ W R+ TCP CR ++
Sbjct: 325 ASKRQCSDMDGICPICQAEFQKPVLLFCQHIFCEECITLWFNREKTCPLCRTVI 378
Score = 53 (23.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 38/164 (23%), Positives = 73/164 (44%)
Query: 118 WLAQKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQT--RQASVSLFF 175
WL QK + YI ++ HI +S LL + F+Y++ + Q R+ S L
Sbjct: 112 WL-QKSLPYILILGIKLVMQHITGISLGIGLL---TTFMYANKSIVNQVFLRERSSKLRC 167
Query: 176 SFEYMILATTTVSIFVKY--------VFYVSDMLME-GQWERK---AVYTFYLELI-RDL 222
++ + LA ++V ++ + + +++ L + WE + F L+ L
Sbjct: 168 AWLLVFLAGSSVLLYYTFHSQSLHYSLIFLNPTLEQLSFWEVLWIVGITDFILKFFFMGL 227
Query: 223 LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRY 266
L + + F+V F + G L+ EL + +R F + + + RY
Sbjct: 228 KCLVLLVPSFIVPFKSKGYWYMLLEELCQYYRIF-VPIPVWFRY 270
>TAIR|locus:2028506 [details] [associations]
symbol:AT1G49220 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:DQ056489 IPI:IPI00517344 PIR:G96528 RefSeq:NP_175348.1
UniGene:At.52090 ProteinModelPortal:P0C034 SMR:P0C034
EnsemblPlants:AT1G49220.1 GeneID:841345 KEGG:ath:AT1G49220
TAIR:At1g49220 HOGENOM:HOG000237642 InParanoid:P0C034 OMA:VMIAPLE
PhylomeDB:P0C034 ProtClustDB:CLSN2682468 Genevestigator:P0C034
GermOnline:AT1G49220 Uniprot:P0C034
Length = 251
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 281 SPE-ELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVV 334
SPE L D C+IC + + ++L C H FHV C+ WL++ TCP CR +V
Sbjct: 123 SPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLV 181
>TAIR|locus:2169145 [details] [associations]
symbol:AT5G37270 "AT5G37270" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AB017069
HOGENOM:HOG000131725 EMBL:DQ086856 IPI:IPI00526930
RefSeq:NP_198543.1 UniGene:At.65588 ProteinModelPortal:Q9FHT8
SMR:Q9FHT8 EnsemblPlants:AT5G37270.1 GeneID:833701
KEGG:ath:AT5G37270 TAIR:At5g37270 eggNOG:NOG255813
InParanoid:Q9FHT8 PhylomeDB:Q9FHT8 ProtClustDB:CLSN2686895
Genevestigator:Q9FHT8 Uniprot:Q9FHT8
Length = 208
Score = 115 (45.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 266 YRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAK--KLI----CGHLFHVHCLRSW 319
++++ F D EE ++TC IC E+ + + +I C HLFH C+ W
Sbjct: 131 FQRLLEEQTMEFTDLGDEE----ETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEW 186
Query: 320 LERQHTCPTCRALVVPPE 337
L+RQ +CP CR VP E
Sbjct: 187 LKRQRSCPLCRR--VPYE 202
Score = 37 (18.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 97 QDFSVSFLAMVTTLLLIKAL 116
Q FSVSF VT +++ ++
Sbjct: 104 QPFSVSFYVRVTRDVMLPSI 123
>WB|WBGene00015642 [details] [associations]
symbol:C09E7.8 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:FO080464
RefSeq:NP_498447.2 ProteinModelPortal:H2KYM7 SMR:H2KYM7
PRIDE:H2KYM7 EnsemblMetazoa:C09E7.8a GeneID:175931
KEGG:cel:CELE_C09E7.8 CTD:175931 WormBase:C09E7.8a
GeneTree:ENSGT00530000064787 OMA:DETISEP Uniprot:H2KYM7
Length = 1114
Score = 135 (52.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 29/75 (38%), Positives = 39/75 (52%)
Query: 267 RKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQ 323
RK+ S N + ELD D+ C IC +EMT K+ I C FH+ C WL +
Sbjct: 1037 RKLFSQPNIVTASITSTELD--DTECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEK 1094
Query: 324 HTCPTCRALVVPPEN 338
CPTCR L++ P +
Sbjct: 1095 RECPTCRKLLLNPSD 1109
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 116 LHWLAQKRVEYIETTPTVPLLSH-IRI 141
L +L K Y + PTVPL H +R+
Sbjct: 556 LPYLIDKS-RYQDVLPTVPLERHRVRV 581
>UNIPROTKB|Q7L0R7 [details] [associations]
symbol:RNF44 "RING finger protein 44" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 OMA:CSAQQLP OrthoDB:EOG498V0T
EMBL:AB029023 EMBL:BC039833 EMBL:BC063297 EMBL:AL834489
IPI:IPI00470579 RefSeq:NP_055716.1 UniGene:Hs.434888
ProteinModelPortal:Q7L0R7 SMR:Q7L0R7 IntAct:Q7L0R7
PhosphoSite:Q7L0R7 DMDM:74758994 PRIDE:Q7L0R7
Ensembl:ENST00000274811 GeneID:22838 KEGG:hsa:22838 UCSC:uc003mek.1
GeneCards:GC05M175886 HGNC:HGNC:19180 HPA:HPA038981
neXtProt:NX_Q7L0R7 PharmGKB:PA38819 InParanoid:Q7L0R7
PhylomeDB:Q7L0R7 ChiTaRS:RNF44 GenomeRNAi:22838 NextBio:43277
ArrayExpress:Q7L0R7 Bgee:Q7L0R7 CleanEx:HS_RNF44
Genevestigator:Q7L0R7 Uniprot:Q7L0R7
Length = 432
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICREEMTTAKKL 305
E YE N R+ D + R +T ++ P +P+ + + C++C + A++L
Sbjct: 335 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFE-ARQL 392
Query: 306 I----CGHLFHVHCLRSWLERQHTCPTCRA 331
+ C H FH C+ WL+ TCP CRA
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRA 422
>RGD|1306011 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1306011 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OMA:GQNTATD OrthoDB:EOG4VQ9PZ EMBL:BC099810 IPI:IPI00369174
RefSeq:NP_001028874.1 UniGene:Rn.143411 SMR:Q499Q1
Ensembl:ENSRNOT00000012317 GeneID:314613 KEGG:rno:314613
UCSC:RGD:1306011 InParanoid:Q499Q1 NextBio:667904
Genevestigator:Q499Q1 Uniprot:Q499Q1
Length = 328
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 283 EELDASDSTCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
EE S C +C+E+ ++ L C HLFH C+ WLE+ +CP CR + G
Sbjct: 237 EEHVGSGLECPVCKEDYALGERVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT----G 292
Query: 340 ASTAGVQHGQRPDTHQSGTATANTASQGSANDAANN 375
+TA G S +++++++S + N +N+
Sbjct: 293 QNTATNPPGLTGVGFSSSSSSSSSSSPSNENATSNS 328
>UNIPROTKB|F1P629 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:AAEX03002976
Ensembl:ENSCAFT00000026405 Uniprot:F1P629
Length = 441
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICREEMTTAKKL 305
E YE N R+ D + R +T ++ P +P+ + + C++C + A++L
Sbjct: 344 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFE-ARQL 401
Query: 306 I----CGHLFHVHCLRSWLERQHTCPTCRA 331
+ C H FH C+ WL+ TCP CRA
Sbjct: 402 LRVLPCNHEFHTKCVDKWLKANRTCPICRA 431
>UNIPROTKB|E1B8N1 [details] [associations]
symbol:LOC521092 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02073830 IPI:IPI00696540
Ensembl:ENSBTAT00000026322 OMA:PICITEY Uniprot:E1B8N1
Length = 621
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 32/82 (39%), Positives = 39/82 (47%)
Query: 256 FRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI---CGHLFH 312
F + AD + R +T + P EE DA+ TC IC E TT L C H +H
Sbjct: 532 FFLLEADPHQTRGLTKLQINSLPLRFFEEKDAA-KTCPICITEYTTGNMLRILPCSHEYH 590
Query: 313 VHCLRSWLERQHTCPTCRALVV 334
C+ WLE CP CRA VV
Sbjct: 591 YQCIDQWLEEHPNCPICRAPVV 612
>WB|WBGene00014031 [details] [associations]
symbol:ZK637.14 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:Z11115 PIR:E88541 PIR:S15788 RefSeq:NP_498962.1
ProteinModelPortal:P30631 SMR:P30631 PaxDb:P30631
EnsemblMetazoa:ZK637.14 GeneID:176251 KEGG:cel:CELE_ZK637.14
UCSC:ZK637.14 CTD:176251 WormBase:ZK637.14 eggNOG:NOG296567
HOGENOM:HOG000016108 InParanoid:P30631 OMA:EDATCAI NextBio:891772
Uniprot:P30631
Length = 161
Score = 104 (41.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/34 (55%), Positives = 20/34 (58%)
Query: 300 TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333
TT + C H FH CL WLE Q TCPTCR V
Sbjct: 104 TTVIVMPCKHRFHYFCLTLWLEAQQTCPTCRQKV 137
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 276 RFPDASPEELDASDSTCIICREEM 299
R D + D+TC IC + +
Sbjct: 56 RLMDRETTDQQKEDATCAICLDNL 79
>MGI|MGI:1917433 [details] [associations]
symbol:Dzip3 "DAZ interacting protein 3, zinc finger"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0031593 "polyubiquitin binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1917433
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0003723 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0019902 CTD:9666 eggNOG:NOG126093
HOVERGEN:HBG051428 KO:K10642 OrthoDB:EOG4V1700 EMBL:AK122344
EMBL:BC052893 EMBL:BC117953 EMBL:BC117954 EMBL:AK039172
EMBL:BI736207 EMBL:CN535823 EMBL:BG070132 IPI:IPI00330236
IPI:IPI00453804 IPI:IPI00453805 RefSeq:NP_001103487.1
RefSeq:NP_081617.1 UniGene:Mm.275138 ProteinModelPortal:Q7TPV2
SMR:Q7TPV2 STRING:Q7TPV2 PhosphoSite:Q7TPV2 PaxDb:Q7TPV2
PRIDE:Q7TPV2 Ensembl:ENSMUST00000114516 GeneID:224170
KEGG:mmu:224170 UCSC:uc007zjy.1 UCSC:uc007zjz.2 UCSC:uc007zka.2
GeneTree:ENSGT00530000063254 HOGENOM:HOG000112306 InParanoid:Q7TPV2
NextBio:377121 Bgee:Q7TPV2 CleanEx:MM_DZIP3 Genevestigator:Q7TPV2
GermOnline:ENSMUSG00000064061 Uniprot:Q7TPV2
Length = 1204
Score = 138 (53.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 28/75 (37%), Positives = 38/75 (50%)
Query: 279 DASPEELDASDSTCIICREEMT--TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPP 336
D + + + C+IC E ++ L C H FH C+R WL +Q TCPTCR V+ P
Sbjct: 1131 DKDMDNEEEEEEPCVICHENLSPENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLHVLQP 1190
Query: 337 ENGASTAGVQHGQRP 351
E G +GQ P
Sbjct: 1191 EE---FPGHPNGQLP 1202
Score = 37 (18.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 264 VRYRKITSNMNDRFPDASPEEL 285
+ + +IT + FP + +EL
Sbjct: 1034 INWERITDRLKTAFPQQTRKEL 1055
>UNIPROTKB|G3MWN3 [details] [associations]
symbol:G3MWN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02001065
Ensembl:ENSBTAT00000064904 Uniprot:G3MWN3
Length = 136
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 286 DASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQHTCPTCR 330
+ + C +C ++ + L C H++H+ C+ WL R TCP CR
Sbjct: 76 ETKTTECAVCLMDLVPGDLIRPLPCKHVYHLDCINQWLTRSFTCPLCR 123
>RGD|1307212 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICREEMTTA--- 302
E YE N R+ D + R +T ++ P +P+ + + C++C +
Sbjct: 253 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLL 311
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+ L C H FH C+ WL+ TCP CRA
Sbjct: 312 RVLPCNHEFHAKCVDKWLKANRTCPICRA 340
>UNIPROTKB|Q4V7B8 [details] [associations]
symbol:Rnf44 "RING finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICREEMTTA--- 302
E YE N R+ D + R +T ++ P +P+ + + C++C +
Sbjct: 253 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLL 311
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+ L C H FH C+ WL+ TCP CRA
Sbjct: 312 RVLPCNHEFHAKCVDKWLKANRTCPICRA 340
>TAIR|locus:2199272 [details] [associations]
symbol:AT1G68180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237766 EMBL:BT010696 EMBL:BT021133 EMBL:DQ086851
IPI:IPI00528273 RefSeq:NP_176985.2 UniGene:At.35560
ProteinModelPortal:Q6NPX0 SMR:Q6NPX0 EnsemblPlants:AT1G68180.1
GeneID:843146 KEGG:ath:AT1G68180 TAIR:At1g68180 eggNOG:NOG271210
InParanoid:Q6NPX0 OMA:HDELDIM PhylomeDB:Q6NPX0
ProtClustDB:CLSN2918429 Genevestigator:Q6NPX0 Uniprot:Q6NPX0
Length = 248
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 27/69 (39%), Positives = 35/69 (50%)
Query: 283 EELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
E+L + C IC+EE K+L C HL+H C+ SWL +TCP CR V G
Sbjct: 130 EDL-VKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV---NLG 185
Query: 340 ASTAGVQHG 348
S + V G
Sbjct: 186 VSESNVDEG 194
>TAIR|locus:2178515 [details] [associations]
symbol:AT5G46650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB016882
HOGENOM:HOG000034167 ProtClustDB:CLSN2916158 IPI:IPI00527161
RefSeq:NP_199477.1 UniGene:At.55407 ProteinModelPortal:Q9FIR0
SMR:Q9FIR0 EnsemblPlants:AT5G46650.1 GeneID:834708
KEGG:ath:AT5G46650 TAIR:At5g46650 eggNOG:NOG324377
InParanoid:Q9FIR0 OMA:EEDRYTL PhylomeDB:Q9FIR0
Genevestigator:Q9FIR0 Uniprot:Q9FIR0
Length = 289
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 36/110 (32%), Positives = 49/110 (44%)
Query: 277 FPDASPEEL--DASDSTCIICR---EEMTTAKKLI--CGHLFHVHCLRSWLERQHTCPTC 329
FP +S ++L D C IC EE +L+ C H+FH C+ WLE TCP C
Sbjct: 97 FPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVC 156
Query: 330 RALVVP--PENGASTA--GVQHGQRPDTHQSGTATANTASQGSANDAANN 375
R + P PEN +Q + Q T+T+N S + NN
Sbjct: 157 RRNLDPNAPENIKELIIEVIQENAHENRDQEQTSTSNEVML-SRQSSGNN 205
>ZFIN|ZDB-GENE-050522-168 [details] [associations]
symbol:rnft2 "ring finger protein, transmembrane 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-050522-168 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000237544 HOVERGEN:HBG056546
CTD:84900 EMBL:BC095073 IPI:IPI00484283 RefSeq:NP_001018369.1
UniGene:Dr.87796 ProteinModelPortal:Q504D2 GeneID:553554
KEGG:dre:553554 InParanoid:Q504D2 NextBio:20880296 Uniprot:Q504D2
Length = 443
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVV 334
AS ++ + C IC+ E L+C H+F CL W +R+ TCP CR+ VV
Sbjct: 371 ASAQQCGEAGDVCAICQAEFREPVALLCQHVFCEECLCLWFDRERTCPLCRSTVV 425
>UNIPROTKB|Q0VD51 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0031902 GO:GO:0005765 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 EMBL:BC119833 IPI:IPI00707917
RefSeq:NP_001069610.1 UniGene:Bt.40316 ProteinModelPortal:Q0VD51
PRIDE:Q0VD51 Ensembl:ENSBTAT00000014803 GeneID:539035
KEGG:bta:539035 CTD:11342 InParanoid:Q0VD51 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB NextBio:20877737 Uniprot:Q0VD51
Length = 380
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 47/167 (28%), Positives = 75/167 (44%)
Query: 223 LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASP 282
L L YL FL+I G+ L LI T F ++ R ++ + + P
Sbjct: 178 LPLEYYLIPFLIIV---GICLILIVIFMIT--KF-VQDRHRARRNRLRKDQLKKLPVHKF 231
Query: 283 EELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER-QHTCPTCRALVVPPEN 338
++ D D C IC +E KL C H +H C+ WL + + TCP C+ VVP +
Sbjct: 232 KKGDEYD-VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ- 289
Query: 339 GASTAGVQHGQRPDTHQSGT------ATANTASQGSANDA-ANNNLT 378
G S + Q + T A+A+T S G+ +++ ++ N+T
Sbjct: 290 GDSDSDTDSSQEENEVSEHTPLLRPLASASTQSFGALSESRSHQNMT 336
>UNIPROTKB|F1RKE5 [details] [associations]
symbol:RNFT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
CTD:84900 OMA:LMCQHVF EMBL:CU424482 EMBL:CU694246
RefSeq:XP_003132941.3 Ensembl:ENSSSCT00000010810 GeneID:100519873
KEGG:ssc:100519873 Uniprot:F1RKE5
Length = 448
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 249 LYETFRNFRI--RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI 306
LY ++F I R+ + K+ + A+ ++ + C IC+ E L+
Sbjct: 343 LYSLCKSFDICGRLGGVRKALKLLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILM 402
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVVPP----ENGASTAGVQ 346
C H+F CL WL+R+ TCP CR++ V ++GA++A Q
Sbjct: 403 CQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCWKDGATSAHFQ 446
>UNIPROTKB|J9P6W1 [details] [associations]
symbol:RNFT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
OMA:LNPTLDH EMBL:AAEX03006588 Ensembl:ENSCAFT00000043037
Uniprot:J9P6W1
Length = 397
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 243 LHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTA 302
L+LI +L + F N R + R +I AS + D C +C+ E
Sbjct: 292 LYLILKLLDFFGNLRT----FRRVLQIFFTRPSYGVAASKRQCSDVDDICSVCQAEFQKP 347
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRALV 333
LIC H+F C+ W R+ TCP CR ++
Sbjct: 348 ILLICQHIFCEECITLWFNREKTCPLCRTVI 378
>UNIPROTKB|Q8N7C7 [details] [associations]
symbol:RNF148 "RING finger protein 148" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9H0F5
HOGENOM:HOG000231432 HOVERGEN:HBG057659 EMBL:AL133414 CTD:378925
EMBL:AK098654 EMBL:BC029264 IPI:IPI00549513 RefSeq:NP_932351.1
UniGene:Hs.675191 ProteinModelPortal:Q8N7C7 SMR:Q8N7C7
PhosphoSite:Q8N7C7 DMDM:269849640 PRIDE:Q8N7C7
Ensembl:ENST00000434824 GeneID:378925 KEGG:hsa:378925
UCSC:uc003vkk.1 GeneCards:GC07M122341 HGNC:HGNC:22411 HPA:HPA045587
neXtProt:NX_Q8N7C7 PharmGKB:PA134918676 eggNOG:NOG254647
OMA:IDPWLLA OrthoDB:EOG4J9N0D GenomeRNAi:378925 NextBio:100862
ArrayExpress:Q8N7C7 Bgee:Q8N7C7 CleanEx:HS_RNF148
Genevestigator:Q8N7C7 Uniprot:Q8N7C7
Length = 305
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 37/133 (27%), Positives = 55/133 (41%)
Query: 208 RKAVY-TFYLELIRDLL----HLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVAD 262
+K VY T +E+ R + H MYL FL + Y L + L N R
Sbjct: 168 QKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFY-LDCVWRLTPRVPNSFTRRRS 226
Query: 263 YVR--YRKITSNMNDRFPDASPEELDASDSTCIICREE---MTTAKKLICGHLFHVHCLR 317
++ +K + R EELD ++ C++C + + L C H FH C+
Sbjct: 227 QIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACID 286
Query: 318 SWLERQHTCPTCR 330
WL TCP C+
Sbjct: 287 PWLLAHRTCPMCK 299
>WB|WBGene00015643 [details] [associations]
symbol:C09E7.9 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG126093
EMBL:FO080464 GeneTree:ENSGT00530000064787 HOGENOM:HOG000148403
RefSeq:NP_498444.1 ProteinModelPortal:Q95YE3 SMR:Q95YE3
EnsemblMetazoa:C09E7.9 GeneID:3565844 KEGG:cel:CELE_C09E7.9
UCSC:C09E7.9 CTD:3565844 WormBase:C09E7.9 InParanoid:Q95YE3
OMA:HEMARYE NextBio:958071 Uniprot:Q95YE3
Length = 789
Score = 127 (49.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALVVPP 336
AS + D+ C IC +EMT K+ I C FH+ C WL + CPTCR L++ P
Sbjct: 723 ASVPSTELDDTECAICLDEMTNFKETIKCECRRRFHLKCATKWLNEKRECPTCRKLLLNP 782
Score = 43 (20.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 54 MCILWQLIKKVFLGSLREAEVERLNEQS-RREIMEI 88
+C W++++ V +R E R E + E++ I
Sbjct: 106 LCEYWRMLENVPCKDIRSIEGARFTENDWKNELIRI 141
>MGI|MGI:2145310 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2145310
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 ChiTaRS:RNF44 EMBL:AK129290
EMBL:AK147349 EMBL:AK160090 EMBL:AK160115 EMBL:AK171943
EMBL:BC017630 EMBL:BC035548 IPI:IPI00453833 IPI:IPI00828733
IPI:IPI00828814 RefSeq:NP_001139497.1 RefSeq:NP_001139498.1
RefSeq:NP_001139499.1 RefSeq:NP_598825.2 UniGene:Mm.25366
ProteinModelPortal:Q3UHJ8 SMR:Q3UHJ8 PhosphoSite:Q3UHJ8
PRIDE:Q3UHJ8 Ensembl:ENSMUST00000037422 Ensembl:ENSMUST00000128257
Ensembl:ENSMUST00000134862 Ensembl:ENSMUST00000150806
Ensembl:ENSMUST00000177950 GeneID:105239 KEGG:mmu:105239
UCSC:uc007qot.2 UCSC:uc007qou.2 UCSC:uc007qow.2 InParanoid:Q3UHJ8
NextBio:357544 Bgee:Q3UHJ8 CleanEx:MM_RNF44 Genevestigator:Q3UHJ8
Uniprot:Q3UHJ8
Length = 407
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICREEMTTA--- 302
E YE N R+ D + R +T ++ P +P+ + + C++C +
Sbjct: 310 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLL 368
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+ L C H FH C+ WL+ TCP CRA
Sbjct: 369 RVLPCNHEFHAKCVDKWLKANRTCPICRA 397
>TAIR|locus:2082762 [details] [associations]
symbol:AT3G61550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 ProtClustDB:CLSN2683451 EMBL:AF428280
EMBL:AY116968 EMBL:AK221661 IPI:IPI00532044 PIR:T47947
RefSeq:NP_191714.1 UniGene:At.948 ProteinModelPortal:Q9M313
SMR:Q9M313 EnsemblPlants:AT3G61550.1 GeneID:825328
KEGG:ath:AT3G61550 TAIR:At3g61550 eggNOG:NOG252222
InParanoid:Q9M313 OMA:CEYMEEE PhylomeDB:Q9M313
Genevestigator:Q9M313 GermOnline:AT3G61550 Uniprot:Q9M313
Length = 212
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 267 RKITSNMN-DRFPDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHT 325
+ IT+ +N D F D E S C EEM C H FHV+CL +WL+ +
Sbjct: 115 KDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPE-CKHYFHVYCLDAWLKLNGS 173
Query: 326 CPTCRALVVP-PEN 338
CP CR +P P++
Sbjct: 174 CPVCRNSPLPTPQS 187
>UNIPROTKB|F1P4I2 [details] [associations]
symbol:RNFT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
EMBL:AADN02025785 IPI:IPI00599094 Ensembl:ENSGALT00000008358
OMA:WHAIFVI Uniprot:F1P4I2
Length = 317
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 21/54 (38%), Positives = 26/54 (48%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333
AS + SD C IC E LIC H F C+ W R+ TCP CR ++
Sbjct: 245 ASKRQCSESDDICSICHAEFQKPILLICQHTFCEECISLWFNREKTCPLCRTVI 298
>TAIR|locus:2140069 [details] [associations]
symbol:AT4G40070 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161596 eggNOG:COG5540 EMBL:AL035708 HOGENOM:HOG000239182
EMBL:AF419600 EMBL:BT000540 IPI:IPI00542846 PIR:H85474 PIR:T06113
RefSeq:NP_568080.2 UniGene:At.27385 ProteinModelPortal:Q8W571
SMR:Q8W571 PRIDE:Q8W571 EnsemblPlants:AT4G40070.1 GeneID:830170
KEGG:ath:AT4G40070 TAIR:At4g40070 OMA:CRSGEES PhylomeDB:Q8W571
ProtClustDB:CLSN2918858 Genevestigator:Q8W571 GermOnline:AT4G40070
Uniprot:Q8W571
Length = 323
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 277 FPDASPEELDASDSTCIICREEMT---TAKKL-ICGHLFHVHCLRSWLERQHTCPTCRAL 332
+ ++ + D C IC E+ T + L IC HLFH+ C+ +WL TCP CR+
Sbjct: 109 YSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSN 168
Query: 333 VVPPEN 338
+ N
Sbjct: 169 LTAKSN 174
>UNIPROTKB|F1N0G7 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:22838 OMA:CSAQQLP
EMBL:DAAA02020035 IPI:IPI00688854 RefSeq:NP_001179642.1
UniGene:Bt.6313 ProteinModelPortal:F1N0G7
Ensembl:ENSBTAT00000023598 GeneID:531968 KEGG:bta:531968
NextBio:20875566 Uniprot:F1N0G7
Length = 432
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDAS--PEELDASDSTCIICREEMTTAKKL 305
E YE N R+ D + R +T ++ P P+ + + C++C + A++L
Sbjct: 335 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFE-ARQL 392
Query: 306 I----CGHLFHVHCLRSWLERQHTCPTCRA 331
+ C H FH C+ WL+ TCP CRA
Sbjct: 393 LRVLPCNHEFHTKCVDKWLKANRTCPICRA 422
>TAIR|locus:2118056 [details] [associations]
symbol:AT4G12140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL049638
EMBL:AL161533 eggNOG:NOG246550 HOGENOM:HOG000153211 IPI:IPI00529226
PIR:T06621 RefSeq:NP_192951.1 UniGene:At.65367
ProteinModelPortal:Q9SZ79 SMR:Q9SZ79 DNASU:826822
EnsemblPlants:AT4G12140.1 GeneID:826822 KEGG:ath:AT4G12140
TAIR:At4g12140 InParanoid:Q9SZ79 OMA:NDPIPKP PhylomeDB:Q9SZ79
ProtClustDB:CLSN2915911 ArrayExpress:Q9SZ79 Genevestigator:Q9SZ79
Uniprot:Q9SZ79
Length = 202
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 263 YVRYRKITSNMND--RFPDASPEELDASD---STCIICREEMTTAKK-----LICGHLFH 312
YV + +S + R EEL + + +C IC + + ++ K + C H+FH
Sbjct: 119 YVHVEETSSKESRMVRLGSMKAEELKSFNMETDSCSICLQSLVSSSKTGPTRMSCSHVFH 178
Query: 313 VHCLRSWLERQHTCPTCRALV 333
CL WL+R++TCP CR ++
Sbjct: 179 SSCLVEWLKRKNTCPMCRTVL 199
>UNIPROTKB|F1S3A0 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:FP101981
Ensembl:ENSSSCT00000015355 Uniprot:F1S3A0
Length = 437
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDAS--PEELDASDSTCIICREEMTTAKKL 305
E YE N R+ D + R +T ++ P P+ + + C++C + A++L
Sbjct: 340 ENYEALLNLAERLGD-AKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFE-ARQL 397
Query: 306 I----CGHLFHVHCLRSWLERQHTCPTCRA 331
+ C H FH C+ WL+ TCP CRA
Sbjct: 398 LRVLPCNHEFHTKCVDKWLKANRTCPICRA 427
>TAIR|locus:2169063 [details] [associations]
symbol:AT5G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025628 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AK175469 EMBL:AK176643 EMBL:AY085503
IPI:IPI00529585 RefSeq:NP_199572.1 UniGene:At.29885
ProteinModelPortal:Q9FGJ6 SMR:Q9FGJ6 EnsemblPlants:AT5G47610.1
GeneID:834811 KEGG:ath:AT5G47610 TAIR:At5g47610 eggNOG:NOG304426
InParanoid:Q9FGJ6 OMA:VISALIC PhylomeDB:Q9FGJ6
ProtClustDB:CLSN2714317 Genevestigator:Q9FGJ6 GermOnline:AT5G47610
Uniprot:Q9FGJ6
Length = 166
Score = 109 (43.4 bits), Expect = 0.00042, P = 0.00042
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVVP 335
+S EL +++ C IC E + + C H FHV C+ WL + +CPTCR +
Sbjct: 95 SSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFS 154
Query: 336 PENGASTAGVQHGQRPDTH 354
QH + P +H
Sbjct: 155 ----------QHSETPSSH 163
>TAIR|locus:2053994 [details] [associations]
symbol:AT2G18670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000237642 ProtClustDB:CLSN2683055 EMBL:AC005724
EMBL:DQ059107 EMBL:AY052699 EMBL:AY098955 EMBL:AY088712
IPI:IPI00522502 PIR:B84567 RefSeq:NP_179457.1 UniGene:At.13211
UniGene:At.69600 UniGene:At.73918 ProteinModelPortal:Q9ZV51
SMR:Q9ZV51 EnsemblPlants:AT2G18670.1 GeneID:816382
KEGG:ath:AT2G18670 TAIR:At2g18670 eggNOG:NOG270264
InParanoid:Q9ZV51 OMA:YRISGEP PhylomeDB:Q9ZV51
Genevestigator:Q9ZV51 Uniprot:Q9ZV51
Length = 181
Score = 111 (44.1 bits), Expect = 0.00043, P = 0.00043
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 222 LLHLSMYLCFFLVIFMNYGVPLHLIRELY--ETFRNFRIRVADYVRYRKITSNMNDRF-- 277
L+ + M+ FFL + + G+ LI L R+ R R + R ++ + ++ RF
Sbjct: 34 LVGVIMFSIFFLFLVL-IGIASVLILPLLLSSLHRHHRRRRRN--RRQESSDGLSSRFVK 90
Query: 278 --PD---ASPEELDASDSTCIIC----REEMTTAKKLICGHLFHVHCLRSWLERQHTCPT 328
P + P +S C++C R+ CGH+FH C+ +WL + TCP
Sbjct: 91 KLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPI 150
Query: 329 CRALV 333
CRA V
Sbjct: 151 CRARV 155
>UNIPROTKB|Q3T0W3 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:BC102230 IPI:IPI00699256
RefSeq:NP_001029682.1 UniGene:Bt.44205 ProteinModelPortal:Q3T0W3
Ensembl:ENSBTAT00000024336 GeneID:515743 KEGG:bta:515743 CTD:51255
eggNOG:NOG294567 HOGENOM:HOG000031081 HOVERGEN:HBG108412
InParanoid:Q3T0W3 OMA:EEQYRQN OrthoDB:EOG40VVQW NextBio:20871984
Uniprot:Q3T0W3
Length = 153
Score = 106 (42.4 bits), Expect = 0.00044, P = 0.00044
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 292 CIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
C++ EE TA ++ C HLFH +C+ WL + ++CP CR
Sbjct: 79 CLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCR 117
>UNIPROTKB|E2QUN1 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN
EMBL:AAEX03010937 RefSeq:XP_532978.2 ProteinModelPortal:E2QUN1
Ensembl:ENSCAFT00000012302 GeneID:475768 KEGG:cfa:475768
Uniprot:E2QUN1
Length = 153
Score = 106 (42.4 bits), Expect = 0.00044, P = 0.00044
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 292 CIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
C++ EE TA ++ C HLFH +C+ WL + ++CP CR
Sbjct: 79 CLLEFEEEETAIEMPCRHLFHSNCILPWLSKTNSCPLCR 117
>UNIPROTKB|E9PMW5 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC084337 InterPro:IPR017907 IPI:IPI00985414
HGNC:HGNC:10064 ProteinModelPortal:E9PMW5 SMR:E9PMW5
Ensembl:ENST00000529529 ArrayExpress:E9PMW5 Bgee:E9PMW5
Uniprot:E9PMW5
Length = 96
Score = 97 (39.2 bits), Expect = 0.00046, P = 0.00046
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 278 PDASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQH---TCPTCRALVV 334
P+ P +D C IC + K L C H F CL++++ Q +CP CR +
Sbjct: 10 PEVQP--MDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSI 67
Query: 335 PPENGAS 341
PE G S
Sbjct: 68 LPEQGVS 74
>UNIPROTKB|F1NDS9 [details] [associations]
symbol:RNFT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014213
OMA:LMCQHVF EMBL:AADN02050451 EMBL:AADN02050452 IPI:IPI00592869
Ensembl:ENSGALT00000013375 Uniprot:F1NDS9
Length = 347
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 249 LYETFRNFRI--RVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI 306
LY ++F I RV + K+ A+ ++ + C IC+ E L+
Sbjct: 242 LYSLCKSFDICGRVGSVRKALKVLCTPQTYGARATSQQCSEAGDICAICQAEFREPLILM 301
Query: 307 CGHLFHVHCLRSWLERQHTCPTCRALVV 334
C H+F CL W +R+ TCP CR++ V
Sbjct: 302 CQHVFCEECLCLWFDREKTCPLCRSVTV 329
>UNIPROTKB|F1PD69 [details] [associations]
symbol:ZNRF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 OMA:GNPSAVC EMBL:AAEX03014784
Ensembl:ENSCAFT00000019014 Uniprot:F1PD69
Length = 827
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 225 LSMYLCFFLVIFMNYGVPLHLI----RELYETFRNFRIRVADYVRYRKITSNMNDRFPDA 280
+ ++L FF+V+ + + L I R + ++ + + RK S R +
Sbjct: 119 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGR-REG 177
Query: 281 SPEELD----ASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALV 333
S LD +S S C IC E+ ++L C H FH C+ WL + HTCP CR +
Sbjct: 178 SCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 237
Query: 334 VPPENGASTAGVQ 346
+ + S V+
Sbjct: 238 IEQKGNPSAVCVE 250
>TAIR|locus:2151421 [details] [associations]
symbol:AT5G17600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000239376 ProtClustDB:CLSN2686341 EMBL:AL391151
EMBL:AK226188 IPI:IPI00533562 PIR:T51464 RefSeq:NP_197262.1
UniGene:At.28195 ProteinModelPortal:Q9LF64 SMR:Q9LF64
EnsemblPlants:AT5G17600.1 GeneID:831626 KEGG:ath:AT5G17600
TAIR:At5g17600 InParanoid:Q9LF64 OMA:TEANQRS PhylomeDB:Q9LF64
Genevestigator:Q9LF64 GermOnline:AT5G17600 Uniprot:Q9LF64
Length = 362
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 285 LDASD-STCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGAST 342
+D SD S C+ EE + + L C H FH+ C+ +WL+ CP CRA V N ++
Sbjct: 137 VDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196
Query: 343 AG-----VQHGQRPDTHQSGTAT 360
G V Q HQ+G+ +
Sbjct: 197 VGQNVSVVVANQSNSAHQTGSVS 219
>TAIR|locus:2117701 [details] [associations]
symbol:AT4G18110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
EMBL:AL110123 EMBL:AL161547 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR024766 Pfam:PF12678 HSSP:P38398 IPI:IPI00547458
PIR:T14811 RefSeq:NP_193545.1 UniGene:At.64190
ProteinModelPortal:Q9SVW0 SMR:Q9SVW0 EnsemblPlants:AT4G18110.1
GeneID:827536 KEGG:ath:AT4G18110 TAIR:At4g18110 eggNOG:NOG256321
HOGENOM:HOG000153557 InParanoid:Q9SVW0 OMA:RILIRSP PhylomeDB:Q9SVW0
ProtClustDB:CLSN2686031 Genevestigator:Q9SVW0 Uniprot:Q9SVW0
Length = 213
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 289 DSTCIICREEMTTA------KKLICGHLFHVHCLRSWLERQHTCPTCR 330
+ CIIC EE+ ++ KL+C H FH C+ WL + +CPTCR
Sbjct: 152 EEECIICLEELASSGSERRIMKLLCSHSFHKDCILPWLRCKRSCPTCR 199
>TAIR|locus:2037683 [details] [associations]
symbol:RHA2A "RING-H2 finger A2A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IMP] [GO:0009789 "positive
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0047484 "regulation of response to osmotic
stress" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0009738 GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0008270 EMBL:AC007591 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0047484 EMBL:AF078822 EMBL:DQ059097
EMBL:AY075590 EMBL:AY094057 EMBL:AY088303 IPI:IPI00526860
PIR:T51842 RefSeq:NP_172962.1 UniGene:At.10851
ProteinModelPortal:Q9ZT50 SMR:Q9ZT50 IntAct:Q9ZT50 STRING:Q9ZT50
EnsemblPlants:AT1G15100.1 GeneID:838073 KEGG:ath:AT1G15100
GeneFarm:4092 TAIR:At1g15100 eggNOG:NOG316107 HOGENOM:HOG000090787
InParanoid:Q9ZT50 KO:K16282 OMA:EVRKLEC PhylomeDB:Q9ZT50
ProtClustDB:CLSN2679440 Genevestigator:Q9ZT50 Uniprot:Q9ZT50
Length = 155
Score = 106 (42.4 bits), Expect = 0.00054, P = 0.00054
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 290 STCIICREEMTTA---KKLICGHLFHVHCLRSWLER-QHTCPTCRALVV 334
S C++C ++ +KL C H+FH CL WL + TCP CR+ +V
Sbjct: 84 SDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALV 132
>MGI|MGI:3039616 [details] [associations]
symbol:Znrf3 "zinc and ring finger 3" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005109 "frizzled binding" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IMP] [GO:0038018 "Wnt receptor catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:0060071 "Wnt receptor signaling pathway, planar
cell polarity pathway" evidence=IMP] [GO:0072089 "stem cell
proliferation" evidence=IMP] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISO] [GO:2000051
"negative regulation of non-canonical Wnt receptor signaling
pathway" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:3039616
Prosite:PS00518 GO:GO:0005887 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090
HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842 GO:GO:0060070
EMBL:AL662876 GO:GO:0072089 GO:GO:0060071 EMBL:AL662853
GeneTree:ENSGT00530000063291 GO:GO:0038018 CTD:84133
HOGENOM:HOG000155811 HOVERGEN:HBG082538 KO:K16273 OMA:GNPSAVC
OrthoDB:EOG48D0TP GO:GO:2000051 EMBL:AK133342 EMBL:BC151080
EMBL:BC151083 IPI:IPI00606016 IPI:IPI00828435 RefSeq:NP_001074393.1
UniGene:Mm.216313 ProteinModelPortal:Q5SSZ7 SMR:Q5SSZ7
PhosphoSite:Q5SSZ7 PRIDE:Q5SSZ7 Ensembl:ENSMUST00000109867
Ensembl:ENSMUST00000172492 GeneID:407821 KEGG:mmu:407821
UCSC:uc007hwj.2 UCSC:uc007hwk.2 InParanoid:Q5SSZ7 NextBio:407279
Bgee:Q5SSZ7 CleanEx:MM_ZNRF3 Genevestigator:Q5SSZ7 Uniprot:Q5SSZ7
Length = 913
Score = 123 (48.4 bits), Expect = 0.00054, P = 0.00054
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 225 LSMYLCFFLVIFMNYGVPLHLI----RELYETFRNFRIRVADYVRYRKITSNMNDRFPDA 280
+ ++L FF+V+ + + L I R + ++ + + RK S R +
Sbjct: 216 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGR-REG 274
Query: 281 SPEELDA----SDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALV 333
S LD S S C IC E+ ++L C H FH C+ WL + HTCP CR +
Sbjct: 275 SCGALDTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 334
Query: 334 VPPEN--GA---STAGVQHGQRP 351
+ + GA T+ + G++P
Sbjct: 335 IEQKGNPGAVCVETSNLTRGRQP 357
>UNIPROTKB|Q9ULT6 [details] [associations]
symbol:ZNRF3 "E3 ubiquitin-protein ligase ZNRF3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0060071 "Wnt receptor signaling pathway,
planar cell polarity pathway" evidence=IEA] [GO:0038018 "Wnt
receptor catabolic process" evidence=IMP] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:2000051 "negative
regulation of non-canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005109 "frizzled binding" evidence=IPI] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005887 GO:GO:0016055 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0090090 HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842
GO:GO:0072089 EMBL:AL021393 GO:GO:0038018 EMBL:AK096397 EMBL:Z95113
EMBL:AL031596 EMBL:AB051436 EMBL:CR456397 EMBL:BC021570
EMBL:BC069019 EMBL:BC094857 IPI:IPI00853368 RefSeq:NP_001193927.1
RefSeq:NP_115549.2 UniGene:Hs.604200 UniGene:Hs.655242
UniGene:Hs.732114 ProteinModelPortal:Q9ULT6 SMR:Q9ULT6
DIP:DIP-50030N IntAct:Q9ULT6 MINT:MINT-2877014 STRING:Q9ULT6
PhosphoSite:Q9ULT6 DMDM:126253847 PaxDb:Q9ULT6 PRIDE:Q9ULT6
DNASU:84133 Ensembl:ENST00000332811 Ensembl:ENST00000402174
Ensembl:ENST00000406323 Ensembl:ENST00000544604 GeneID:84133
KEGG:hsa:84133 UCSC:uc003aeg.3 CTD:84133 GeneCards:GC22P029279
HGNC:HGNC:18126 HPA:HPA036703 MIM:612062 neXtProt:NX_Q9ULT6
PharmGKB:PA134983897 HOGENOM:HOG000155811 HOVERGEN:HBG082538
InParanoid:Q9ULT6 KO:K16273 OMA:GNPSAVC OrthoDB:EOG48D0TP
GenomeRNAi:84133 NextBio:73429 ArrayExpress:Q9ULT6 Bgee:Q9ULT6
CleanEx:HS_ZNRF3 Genevestigator:Q9ULT6 GO:GO:2000051 Uniprot:Q9ULT6
Length = 936
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 225 LSMYLCFFLVIFMNYGVPLHLI----RELYETFRNFRIRVADYVRYRKITSNMNDRFPDA 280
+ ++L FF+V+ + + L I R + ++ + + RK S R +
Sbjct: 219 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGR-REG 277
Query: 281 SPEELD----ASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALV 333
S LD +S S C IC E+ ++L C H FH C+ WL + HTCP CR +
Sbjct: 278 SCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337
Query: 334 VPPENGASTAGVQ 346
+ + S V+
Sbjct: 338 IEQKGNPSAVCVE 350
>DICTYBASE|DDB_G0271294 [details] [associations]
symbol:DDB_G0271294 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0271294
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000006 Gene3D:3.30.40.10
InterPro:IPR013083 RefSeq:XP_645668.1 ProteinModelPortal:Q55BE4
EnsemblProtists:DDB0202843 GeneID:8617860 KEGG:ddi:DDB_G0271294
eggNOG:NOG294050 InParanoid:Q55BE4 OMA:NCRYPLP Uniprot:Q55BE4
Length = 161
Score = 107 (42.7 bits), Expect = 0.00057, P = 0.00057
Identities = 30/88 (34%), Positives = 40/88 (45%)
Query: 292 CIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHG 348
C IC E T A KL C H FH CL SWL+ CP CR + P A +
Sbjct: 66 CTICLCEFPIDTEALKLPCKHYFHHECLDSWLKTSAACPNCRYPL--PTIDAEYESMVRI 123
Query: 349 QRPDTHQSGTATANTASQGSANDAANNN 376
R ++G+ ++T + ND N+N
Sbjct: 124 VRDYELKNGSTNSSTTTNN--NDDDNDN 149
>TAIR|locus:2090980 [details] [associations]
symbol:AT3G14320 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB022220 IPI:IPI00542849
RefSeq:NP_188049.1 UniGene:At.65086 ProteinModelPortal:Q9LUL6
SMR:Q9LUL6 EnsemblPlants:AT3G14320.1 GeneID:820652
KEGG:ath:AT3G14320 TAIR:At3g14320 eggNOG:NOG324121
HOGENOM:HOG000034170 InParanoid:Q9LUL6 OMA:SNSTCPI PhylomeDB:Q9LUL6
ProtClustDB:CLSN2915567 Genevestigator:Q9LUL6 GermOnline:AT3G14320
Uniprot:Q9LUL6
Length = 204
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 26/79 (32%), Positives = 34/79 (43%)
Query: 292 CIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALV------VPPENGA- 340
C++C E+ K C H FHV C+ SWL+ TCP CR V PE G
Sbjct: 88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRPELGGR 147
Query: 341 -STAGVQHGQRPDTHQSGT 358
+ H Q + H+ T
Sbjct: 148 DKSFNQNHDQTSEHHEFST 166
>UNIPROTKB|F1RFJ1 [details] [associations]
symbol:ZNRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 OMA:GNPSAVC EMBL:CT954243
Ensembl:ENSSSCT00000010927 Uniprot:F1RFJ1
Length = 786
Score = 122 (48.0 bits), Expect = 0.00058, P = 0.00058
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 225 LSMYLCFFLVIFMNYGVPLHLI----RELYETFRNFRIRVADYVRYRKITSNMNDRFPDA 280
+ ++L FF+V+ + + L I R + ++ + + RK S R +
Sbjct: 84 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGR-REG 142
Query: 281 SPEELD----ASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALV 333
S LD +S S C IC E+ ++L C H FH C+ WL + HTCP CR +
Sbjct: 143 SCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 202
Query: 334 VPPENGASTAGVQ 346
+ + S V+
Sbjct: 203 IEQKGNPSAMCVE 215
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 96 (38.9 bits), Expect = 0.00058, P = 0.00058
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 275 DRFPDASPEELDASDST--CIICREEMTTAKKLICGHLFHVHCLRSWLE---RQHTCPTC 329
D P+ E + +T C IC E A +CGHL+ CL WLE + CP C
Sbjct: 8 DGGPEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVC 67
Query: 330 RA 331
+A
Sbjct: 68 KA 69
>ASPGD|ASPL0000072677 [details] [associations]
symbol:AN4637 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BN001303
eggNOG:COG5540 EMBL:AACD01000079 OrthoDB:EOG47M57Q
RefSeq:XP_662241.1 ProteinModelPortal:Q5B493
EnsemblFungi:CADANIAT00005795 GeneID:2872434 KEGG:ani:AN4637.2
HOGENOM:HOG000184502 OMA:TTRRRTC Uniprot:Q5B493
Length = 812
Score = 122 (48.0 bits), Expect = 0.00060, P = 0.00060
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 292 CIICREE----MTTAKKLICGHLFHVHCLRSWLE-RQHTCPTCRALVVPPENGASTAGVQ 346
C++C EE + L CGH FHV C+ WL R+ TCP C+ VV + + A +
Sbjct: 678 CVVCLEEYIDGQSRVMSLPCGHEFHVECITPWLTTRRRTCPICKGDVVRSMSQSHHAETR 737
Query: 347 HGQRPDTHQSGT 358
++H+ GT
Sbjct: 738 SEHDAESHRGGT 749
>UNIPROTKB|E1C2S8 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0044314 "protein K27-linked
ubiquitination" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IEA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0044314 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AADN02005166 IPI:IPI00592288
Ensembl:ENSGALT00000027631 Uniprot:E1C2S8
Length = 673
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 272 NMNDR-FPDASPEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCP 327
N++ R + D EE + S TC +C E T KL C H FH+HC+ WL TCP
Sbjct: 601 NLSTRNYGDIHTEE-EIS-KTCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCP 658
Query: 328 TCRALVV 334
CR V+
Sbjct: 659 ICRQPVL 665
>TAIR|locus:2156867 [details] [associations]
symbol:AT5G66070 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00657375 RefSeq:NP_001032158.1 UniGene:At.28882
ProteinModelPortal:F4JZ26 SMR:F4JZ26 EnsemblPlants:AT5G66070.2
GeneID:836739 KEGG:ath:AT5G66070 OMA:IDKWLLR Uniprot:F4JZ26
Length = 245
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 193 YVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCF--FLVIFMNYGVPLHLIRELY 250
Y+ V L+ G+ R+ + L ++ + L +L F +I +N+ + + +
Sbjct: 101 YLIDVIASLLSGRLVRERIGPAMLSAVQSQVQLP-FLFFDASFIILLNFCINNKQMGAVE 159
Query: 251 ETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT---TAKKLI- 306
F++ + D + +T + +R P + +C +C ++ T + L
Sbjct: 160 SQFQD-HTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPH 218
Query: 307 CGHLFHVHCLRSWLERQHTCPTCR 330
C H+FH+ C+ WL R +CP CR
Sbjct: 219 CHHMFHLPCIDKWLRRHASCPLCR 242
>ZFIN|ZDB-GENE-040426-1277 [details] [associations]
symbol:rnf11a "ring finger protein 11a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-040426-1277 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG058444
EMBL:BC053118 IPI:IPI00485593 RefSeq:NP_957315.1 UniGene:Dr.85919
ProteinModelPortal:Q7T3H3 GeneID:393996 KEGG:dre:393996 CTD:393996
InParanoid:Q7T3H3 NextBio:20814964 ArrayExpress:Q7T3H3
Uniprot:Q7T3H3
Length = 146
Score = 103 (41.3 bits), Expect = 0.00062, P = 0.00062
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 279 DASPEELDASDSTCIICREEMTTA---KKLICGHLFHVHCLRSWLERQHTCPTC 329
D E D C+IC + + L C H++HV C+ +WL R TCP+C
Sbjct: 78 DPGSEPSDKKIKECVICMMDFEYGDPIRFLPCMHIYHVDCIDAWLMRSFTCPSC 131
>POMBASE|SPAC144.05 [details] [associations]
symbol:SPAC144.05 "ATP-dependent DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 PomBase:SPAC144.05 Prosite:PS00518
GO:GO:0005524 EMBL:CU329670 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 GO:GO:0004842 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 KO:K15710 OMA:HTWGVSG OrthoDB:EOG4Q2HPM PIR:T37672
RefSeq:NP_594666.1 ProteinModelPortal:Q9UTL9
EnsemblFungi:SPAC144.05.1 GeneID:2542902 KEGG:spo:SPAC144.05
NextBio:20803941 Uniprot:Q9UTL9
Length = 1375
Score = 133 (51.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 237 MNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDA-SDSTCIIC 295
MN +HL+REL E N + ++A + R+ +N+ + L A S CIIC
Sbjct: 1042 MNIPGHIHLLRELEEEKSNTQRKIAHFESRRRYLTNLYEHIV------LKAESHQICIIC 1095
Query: 296 REEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
R+ + CGHL+ CL +WL+ +CP C+
Sbjct: 1096 RDIIKQGFITTCGHLYCSFCLEAWLKHSSSCPMCK 1130
Score = 40 (19.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 16 LAVVYHAFNSRRQFYPSMVYLSTS 39
L+++ +NSR ++Y + +S S
Sbjct: 955 LSIIQLTYNSRIEYYKQLQEISDS 978
>TAIR|locus:2009660 [details] [associations]
symbol:AT1G53190 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT020580 EMBL:BT029187
IPI:IPI00525716 RefSeq:NP_001031177.1 RefSeq:NP_175727.2
UniGene:At.43317 ProteinModelPortal:Q5EAI9 SMR:Q5EAI9 PRIDE:Q5EAI9
EnsemblPlants:AT1G53190.1 EnsemblPlants:AT1G53190.2 GeneID:841753
KEGG:ath:AT1G53190 TAIR:At1g53190 HOGENOM:HOG000238152
InParanoid:Q5EAI9 OMA:TLDCGHE PhylomeDB:Q5EAI9
ProtClustDB:CLSN2688389 Genevestigator:Q5EAI9 Uniprot:Q5EAI9
Length = 494
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 260 VADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI---CGHLFHVHCL 316
V ++++ R S +N +SP D C IC+E +K+ CGH +H CL
Sbjct: 411 VKNHLKTRTC-SGINFEKESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECL 469
Query: 317 RSWLERQHTCPTCR--ALVV 334
WL ++ CP C+ ALV+
Sbjct: 470 EKWLIVKNVCPICKSEALVM 489
>TAIR|locus:2097830 [details] [associations]
symbol:SIS3 "SUGAR-INSENSITIVE 3" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010182 "sugar mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0010182
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AL049658 EMBL:AK117391 IPI:IPI00536247 PIR:T06684
RefSeq:NP_190382.2 UniGene:At.21725 ProteinModelPortal:Q8GYT9
SMR:Q8GYT9 STRING:Q8GYT9 PaxDb:Q8GYT9 PRIDE:Q8GYT9
EnsemblPlants:AT3G47990.1 GeneID:823954 KEGG:ath:AT3G47990
TAIR:At3g47990 eggNOG:NOG317826 HOGENOM:HOG000077621
InParanoid:Q8GYT9 KO:K16284 OMA:INWKRYR PhylomeDB:Q8GYT9
ProtClustDB:CLSN2680356 Genevestigator:Q8GYT9 Uniprot:Q8GYT9
Length = 358
Score = 110 (43.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 292 CIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHG 348
C+IC EE + L C H FHV C+ WL CP CR V P + ++ + +Q
Sbjct: 235 CLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPDLDLSALSNLQSS 294
Query: 349 QRPDTHQSGTATA 361
Q T T+
Sbjct: 295 GTEQHSQVNTETS 307
Score = 49 (22.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 103 FLAMVTTLLLIKALHWLAQKRVEY 126
FL+M+ T ++I A++W + EY
Sbjct: 15 FLSMLATSVIIVAVNWNRYRACEY 38
>UNIPROTKB|Q9BV68 [details] [associations]
symbol:RNF126 "RING finger protein 126" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:AK000559 EMBL:BC001442 EMBL:BC025374
IPI:IPI00155562 IPI:IPI00745921 RefSeq:NP_919442.1 UniGene:Hs.69554
ProteinModelPortal:Q9BV68 SMR:Q9BV68 IntAct:Q9BV68
MINT:MINT-1032305 STRING:Q9BV68 PhosphoSite:Q9BV68 DMDM:74762712
PaxDb:Q9BV68 PRIDE:Q9BV68 Ensembl:ENST00000292363 GeneID:55658
KEGG:hsa:55658 UCSC:uc010drs.3 GeneCards:GC19M000647
H-InvDB:HIX0014558 HGNC:HGNC:21151 HPA:HPA043050 neXtProt:NX_Q9BV68
PharmGKB:PA134876469 InParanoid:Q9BV68 PhylomeDB:Q9BV68
ChiTaRS:RNF126 GenomeRNAi:55658 NextBio:60383 ArrayExpress:Q9BV68
Bgee:Q9BV68 CleanEx:HS_RNF126 Genevestigator:Q9BV68
GermOnline:ENSG00000070423 Uniprot:Q9BV68
Length = 326
Score = 116 (45.9 bits), Expect = 0.00069, P = 0.00069
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 283 EELDASDSTCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
EE S C +C+++ ++ L C HLFH C+ WLE+ +CP CR + G
Sbjct: 220 EEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLT----G 275
Query: 340 ASTAGVQHGQRPDTHQSGTATANTASQGSANDAANNNLT 378
+TA G +G + ++++S S++ +N N T
Sbjct: 276 QNTATNPPGL------TGVSFSSSSSSSSSSSPSNENAT 308
>DICTYBASE|DDB_G0278501 [details] [associations]
symbol:DDB_G0278501 "C3HC4 type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0278501 GO:GO:0046872
EMBL:AAFI02000023 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 RefSeq:XP_642403.1
ProteinModelPortal:Q54XZ9 EnsemblProtists:DDB0205494 GeneID:8621608
KEGG:ddi:DDB_G0278501 InParanoid:Q54XZ9 OMA:ISIFYLR Uniprot:Q54XZ9
Length = 666
Score = 116 (45.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 292 CIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALVV 334
C+IC ++ +K + C HLFH CL WLE + CPTCR+ +V
Sbjct: 617 CVICMSDVEEGQKYMLTECNHLFHEKCLLQWLEFKAQCPTCRSEIV 662
Score = 50 (22.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 37/167 (22%), Positives = 66/167 (39%)
Query: 90 FAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMSFLL 149
F + +FR ++++ MV+ I+ + Q +T+ + I I + M L
Sbjct: 358 FDLPLFRSKM-MNYVVMVSLCSFIQIFVLIRQMDYTGTQTSAARVSIYTIGIQTIMDAYL 416
Query: 150 LVDSLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSIF-VKYVFYV----SDMLMEG 204
+ L + +L A+ S FF F T ++F ++Y+ + S
Sbjct: 417 CLIHLSAGVIMDYLFNAF-ATAS-FFQF-------VTFALFEMRYLLIILKARSPSAFAD 467
Query: 205 QWE--RKAVYTFYLELIRDLL-------HLSMYLCFFLVIFMNYGVP 242
WE R+ + FYL L + S + FFL + +Y VP
Sbjct: 468 GWESLRRQISIFYLRFYSCLFGGFVLLYYFSNFFHFFLFLLFSYWVP 514
>UNIPROTKB|F1NA38 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 OMA:MGSNDID
IPI:IPI00587571 EMBL:AADN02021136 EMBL:AADN02021135
Ensembl:ENSGALT00000016951 Uniprot:F1NA38
Length = 380
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 46/167 (27%), Positives = 74/167 (44%)
Query: 223 LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASP 282
L L YL FL+I G+ L LI T F ++ R ++ + + P
Sbjct: 177 LPLEYYLIPFLIIV---GICLILIVIFMIT--KF-VQDRHRARRNRLRKDQLKKLPVHKF 230
Query: 283 EELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER-QHTCPTCRALVVPPEN 338
++ D D C IC +E KL C H +H C+ WL + + TCP C+ VVP +
Sbjct: 231 KKGDEYD-VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ- 288
Query: 339 GASTAGVQHGQRPDTHQSGT------ATANTASQGSANDA-ANNNLT 378
G S + Q + T A+ +T S G+ +++ ++ N+T
Sbjct: 289 GDSDSETDSSQEENEVSENTPLLRPLASVSTQSFGALSESHSHQNMT 335
>UNIPROTKB|Q90972 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:X95455 EMBL:AY787020 IPI:IPI00587571
RefSeq:NP_990686.1 UniGene:Gga.3523 ProteinModelPortal:Q90972
STRING:Q90972 PRIDE:Q90972 GeneID:396303 KEGG:gga:396303
InParanoid:Q90972 NextBio:20816353 Uniprot:Q90972
Length = 381
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 46/167 (27%), Positives = 74/167 (44%)
Query: 223 LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASP 282
L L YL FL+I G+ L LI T F ++ R ++ + + P
Sbjct: 178 LPLEYYLIPFLIIV---GICLILIVIFMIT--KF-VQDRHRARRNRLRKDQLKKLPVHKF 231
Query: 283 EELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER-QHTCPTCRALVVPPEN 338
++ D D C IC +E KL C H +H C+ WL + + TCP C+ VVP +
Sbjct: 232 KKGDEYD-VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ- 289
Query: 339 GASTAGVQHGQRPDTHQSGT------ATANTASQGSANDA-ANNNLT 378
G S + Q + T A+ +T S G+ +++ ++ N+T
Sbjct: 290 GDSDSETDSSQEENEVSENTPLLRPLASVSTQSFGALSESHSHQNMT 336
>UNIPROTKB|G4NGM3 [details] [associations]
symbol:MGG_04088 "Anaphase-promoting complex subunit 11"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR024991 Pfam:PF12861 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0005680 KO:K03358
EMBL:CM001236 RefSeq:XP_003719750.1 ProteinModelPortal:G4NGM3
EnsemblFungi:MGG_04088T0 GeneID:2677680 KEGG:mgr:MGG_04088
Uniprot:G4NGM3
Length = 104
Score = 95 (38.5 bits), Expect = 0.00075, P = 0.00075
Identities = 23/73 (31%), Positives = 30/73 (41%)
Query: 289 DSTCIICREEMTTAKKLI--CGHLFHVHCLRSWLERQHT---CPTCRALVVPPEN-GAST 342
D TC C+ L CGH FH+HC+ W+++ CP CR E G
Sbjct: 32 DGTCPTCKYPGDDCSLLSGKCGHNFHMHCILEWIKQDSAKGQCPMCRQKFEWNEQPGQHP 91
Query: 343 AGVQHGQRPDTHQ 355
G + P T Q
Sbjct: 92 PGSRSSMAPPTQQ 104
>MGI|MGI:1921382 [details] [associations]
symbol:Rnf6 "ring finger protein (C3H2C3 type) 6"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016605 "PML body" evidence=IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0044314 "protein K27-linked ubiquitination" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IMP]
[GO:0085020 "protein K6-linked ubiquitination" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1921382 Prosite:PS00518 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842
GO:GO:0050681 GO:GO:0060765 GO:GO:0070936 GO:GO:0085020
GO:GO:0030517 GO:GO:0044314 EMBL:CH466614 HOVERGEN:HBG009886
GeneTree:ENSGT00700000104290 HOGENOM:HOG000273881 CTD:6049
OMA:TIRIPLR OrthoDB:EOG4N04DD EMBL:AY039004 EMBL:AK004745
EMBL:AK150269 EMBL:AK152106 EMBL:BC138545 IPI:IPI00471389
RefSeq:NP_001243014.1 RefSeq:NP_001243016.1 RefSeq:NP_083050.1
UniGene:Mm.26696 ProteinModelPortal:Q9DBU5 SMR:Q9DBU5 IntAct:Q9DBU5
STRING:Q9DBU5 PhosphoSite:Q9DBU5 PRIDE:Q9DBU5
Ensembl:ENSMUST00000067837 Ensembl:ENSMUST00000161859
Ensembl:ENSMUST00000169407 GeneID:74132 KEGG:mmu:74132
UCSC:uc009anb.1 InParanoid:B2RRR0 NextBio:339862 Bgee:Q9DBU5
Genevestigator:Q9DBU5 Uniprot:Q9DBU5
Length = 667
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 32/96 (33%), Positives = 43/96 (44%)
Query: 256 FRIRVADYVRYRKITSNMNDRFPDASPEELDASDS----TCIICREEMTTAKKLI---CG 308
F + D R +T D S E+ D DS C +C + KL C
Sbjct: 575 FLLNEGDDDPIRGLTKEQIDNLSTRSYEQ-DGVDSELGKVCSVCISDYVAGNKLRQLPCL 633
Query: 309 HLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAG 344
H FH+HC+ WL TCP CR V+ E GA+++G
Sbjct: 634 HEFHIHCIDRWLSENCTCPVCRRPVL--EFGATSSG 667
>TAIR|locus:2206722 [details] [associations]
symbol:AT1G35330 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC069160 HOGENOM:HOG000239182 IPI:IPI00547066 PIR:D86474
RefSeq:NP_174766.1 UniGene:At.51949 ProteinModelPortal:Q9C7I1
SMR:Q9C7I1 EnsemblPlants:AT1G35330.1 GeneID:840422
KEGG:ath:AT1G35330 TAIR:At1g35330 eggNOG:NOG282652
InParanoid:Q9C7I1 OMA:SNWRITE PhylomeDB:Q9C7I1
ProtClustDB:CLSN2914356 Genevestigator:Q9C7I1 GermOnline:AT1G35330
Uniprot:Q9C7I1
Length = 327
Score = 111 (44.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 24/68 (35%), Positives = 32/68 (47%)
Query: 292 CIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQH 347
C IC E + L C H FH C+ WL + TCP CRA + PP+ G+ +
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL-PPKPGSDQNSLYP 186
Query: 348 GQRPDTHQ 355
RP +Q
Sbjct: 187 FIRPHDNQ 194
Score = 46 (21.3 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 415 LPQANRPLGDYTSVELGQEQASAGQPQQF 443
LPQA Y S +G E+ G+ ++F
Sbjct: 286 LPQARSSREGYRSGSVGSERRGKGKEKEF 314
>TAIR|locus:2143176 [details] [associations]
symbol:AT5G15820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AL391144 HOGENOM:HOG000152578 ProtClustDB:CLSN2685198
EMBL:AY057666 EMBL:AY113016 IPI:IPI00536796 PIR:T51411
RefSeq:NP_197086.1 UniGene:At.26239 ProteinModelPortal:Q9LFU4
SMR:Q9LFU4 EnsemblPlants:AT5G15820.1 GeneID:831439
KEGG:ath:AT5G15820 TAIR:At5g15820 eggNOG:NOG241089
InParanoid:Q9LFU4 OMA:IVCAICK PhylomeDB:Q9LFU4
Genevestigator:Q9LFU4 Uniprot:Q9LFU4
Length = 348
Score = 116 (45.9 bits), Expect = 0.00078, P = 0.00078
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 275 DRFPDA--SPEELDASDSTCIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTC 329
D PD + EEL + C IC++E+ K+L C H +H C+ WL ++TCP C
Sbjct: 272 DGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVC 331
Query: 330 R 330
R
Sbjct: 332 R 332
>TAIR|locus:2100021 [details] [associations]
symbol:SDIR1 "SALT- AND DROUGHT-INDUCED RING FINGER1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009789
"positive regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0006301 "postreplication
repair" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005783
GO:GO:0043231 GO:GO:0016021 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0009414 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0031090 EMBL:AL132975
UniGene:At.28462 UniGene:At.48772 EMBL:AF386995 EMBL:BT006305
EMBL:AK317055 IPI:IPI00546001 PIR:T47692 RefSeq:NP_191112.1
ProteinModelPortal:Q9M2S6 SMR:Q9M2S6 STRING:Q9M2S6
EnsemblPlants:AT3G55530.1 GeneID:824718 KEGG:ath:AT3G55530
TAIR:At3g55530 eggNOG:NOG316504 HOGENOM:HOG000005982
InParanoid:Q9M2S6 KO:K16283 OMA:RAMRIHA PhylomeDB:Q9M2S6
ProtClustDB:CLSN2685302 Genevestigator:Q9M2S6 Uniprot:Q9M2S6
Length = 273
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 270 TSNMNDRFPDASPEELDASDS--TCIICREEMTTA---KKLICGHLFHVHCLRSWLERQH 324
TS+ ++ D++ E ++ TC +C E++T + L C H FH C+ WL +Q
Sbjct: 187 TSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQG 246
Query: 325 TCPTCR 330
TCP C+
Sbjct: 247 TCPVCK 252
>ZFIN|ZDB-GENE-061215-82 [details] [associations]
symbol:rnf115 "ring finger protein 115" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-061215-82 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:BX322530 EMBL:BC128879 IPI:IPI00803572
RefSeq:NP_001073542.1 UniGene:Dr.78061 SMR:A1A601
Ensembl:ENSDART00000090329 GeneID:790928 KEGG:dre:790928
InParanoid:A1A601 NextBio:20930412 Uniprot:A1A601
Length = 310
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 292 CIICREEMTTA---KKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTA 343
C +C+E+ T ++L C H FH C+ WLE TCP CR + E+G ++
Sbjct: 238 CPVCKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLNGDESGTQSS 292
>ZFIN|ZDB-GENE-060213-1 [details] [associations]
symbol:rnf150a "ring finger protein 150a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
ZFIN:ZDB-GENE-060213-1 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG302028 GeneTree:ENSGT00700000104211
HOGENOM:HOG000231432 HOVERGEN:HBG057659 OrthoDB:EOG412M5G
EMBL:BX957281 IPI:IPI00638837 RefSeq:NP_001139044.1
UniGene:Dr.113703 ProteinModelPortal:B8A6H5
Ensembl:ENSDART00000035713 GeneID:559804 OMA:CAICIEN
NextBio:20883145 Bgee:B8A6H5 Uniprot:B8A6H5
Length = 418
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 39/170 (22%), Positives = 74/170 (43%)
Query: 222 LLHLSMYLCFFLVIFMNYGVPLHLIRELYETFRN-FRIRVADYVRYRKITSNMNDRFPDA 280
++ +S+ ++I + + V ++ R Y R+ + R+ D + K S + R
Sbjct: 196 VVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRSQRRLGDAAK--KAISKLQVRTIRK 253
Query: 281 SPEELDASDSTCIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTCR-----AL 332
+E D+ C +C E+ + L C H+FH +C+ WL+ TCP C+ AL
Sbjct: 254 GDKETDSDFDNCAVCIEDYKPNDVVRILPCRHVFHRNCVDPWLQDHRTCPMCKMNILKAL 313
Query: 333 VVPPENGASTAGVQHGQRPDTHQSGTATANTASQGSAN-DAANNNLTLHQ 381
+PP S P +++ + + A G++ ++L L Q
Sbjct: 314 GIPPNTDCSD------DAPPDYETSSGQPSIAVTGASEVSVGESSLVLDQ 357
>TAIR|locus:2122378 [details] [associations]
symbol:AT4G09130 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000239182 EMBL:AL161514
ProtClustDB:CLSN2685392 IPI:IPI00538403 PIR:E85092
RefSeq:NP_192652.1 UniGene:At.54226 ProteinModelPortal:Q9M0R4
SMR:Q9M0R4 EnsemblPlants:AT4G09130.1 GeneID:826491
KEGG:ath:AT4G09130 TAIR:At4g09130 eggNOG:NOG245216
InParanoid:Q9M0R4 OMA:HIALPRA PhylomeDB:Q9M0R4
Genevestigator:Q9M0R4 GermOnline:AT4G09130 Uniprot:Q9M0R4
Length = 357
Score = 106 (42.4 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 48/165 (29%), Positives = 70/165 (42%)
Query: 225 LSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEE 284
LS++L +V +NYG + E ET + + VR R I ++ + FP E
Sbjct: 55 LSLFLLLLVVYCLNYGCCI----EENETGGHEVLH--SRVR-RGIDKDVIESFPAFLYSE 107
Query: 285 LDA-----SDSTCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALV-- 333
+ A C IC E + L C H FH +C+ WL + TCP CRA +
Sbjct: 108 VKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSL 167
Query: 334 -----VP-PENGASTAGVQHG--QRPDTHQSGTATANTASQGSAN 370
P P T Q G + PD +S T ++ T + +AN
Sbjct: 168 KSGDSFPHPSMDVETGNAQRGVQESPD-ERSLTGSSVTCNN-NAN 210
Score = 48 (22.0 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 92 ITIFRQDFSVSFLAMVTT-LLLIKALHWLA-QKRVEYIETTPTVPLLSHIRIVSFMSFLL 149
+TIF +DFS LA V L L + L ++ Q+ E S I IV FLL
Sbjct: 1 MTIFTRDFSHRILACVLLPLFLFQCLPYVTCQQGSESAGRNGKSKESSIIGIVLLSLFLL 60
Query: 150 LV 151
L+
Sbjct: 61 LL 62
Score = 41 (19.5 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 412 YVVLPQANRPLGDYTSVELGQEQASAGQPQQ 442
++ LP+A Y S +G E+ Q +Q
Sbjct: 274 HIALPRARSSRQGYRSGSVGNERTGFSQGRQ 304
>TAIR|locus:2825708 [details] [associations]
symbol:AT1G20823 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 EMBL:AC069251 GO:GO:0016567 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AY045849 IPI:IPI00544827 PIR:F86340
RefSeq:NP_173506.1 UniGene:At.15492 ProteinModelPortal:Q9LM69
SMR:Q9LM69 STRING:Q9LM69 PRIDE:Q9LM69 ProMEX:Q9LM69
EnsemblPlants:AT1G20823.1 GeneID:838674 KEGG:ath:AT1G20823
TAIR:At1g20823 InParanoid:Q9LM69 OMA:EIRIKQG PhylomeDB:Q9LM69
ProtClustDB:CLSN2679434 Genevestigator:Q9LM69 GermOnline:AT1G20823
Uniprot:Q9LM69
Length = 197
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 281 SPEELDASD-STCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVV 334
SPE ++ + C IC E + +L CGH FHV C+ +WL +CP+CR ++V
Sbjct: 99 SPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILV 157
>UNIPROTKB|Q3SZS9 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GeneTree:ENSGT00670000097625 CTD:152006
HOGENOM:HOG000231638 HOVERGEN:HBG059283 OMA:FLLHPPH
OrthoDB:EOG4TB4B7 EMBL:DAAA02023138 EMBL:BC102724 IPI:IPI00686553
RefSeq:NP_001029753.1 UniGene:Bt.4320 SMR:Q3SZS9
Ensembl:ENSBTAT00000007260 GeneID:532877 KEGG:bta:532877
InParanoid:Q3SZS9 NextBio:20875836 Uniprot:Q3SZS9
Length = 432
Score = 117 (46.2 bits), Expect = 0.00088, P = 0.00088
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICR---EEMTTA 302
E YE N R+ + + R +T ++ P +P + + C++C E
Sbjct: 335 ENYEALLNLAERLGE-AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLL 393
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+ L C H FH C+ WL+ TCP CRA
Sbjct: 394 RVLPCNHEFHAKCVDKWLKANRTCPICRA 422
>UNIPROTKB|F1PLL1 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:152006 OMA:FLLHPPH
EMBL:AAEX03007963 RefSeq:XP_866889.1 Ensembl:ENSCAFT00000003636
GeneID:474766 KEGG:cfa:474766 Uniprot:F1PLL1
Length = 432
Score = 117 (46.2 bits), Expect = 0.00088, P = 0.00088
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICR---EEMTTA 302
E YE N R+ + + R +T ++ P +P + + C++C E
Sbjct: 335 ENYEALLNLAERLGE-AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLL 393
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+ L C H FH C+ WL+ TCP CRA
Sbjct: 394 RVLPCNHEFHAKCVDKWLKANRTCPICRA 422
>UNIPROTKB|Q5M7Z0 [details] [associations]
symbol:RNFT1 "RING finger and transmembrane
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 EMBL:CH471109 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398 CTD:51136
eggNOG:NOG329292 HOGENOM:HOG000237544 HOVERGEN:HBG056546
OMA:LNPTLDH OrthoDB:EOG412M5F EMBL:AF100745 EMBL:AC004686
EMBL:AC005702 EMBL:BC006971 EMBL:BC088365 EMBL:AK098649
IPI:IPI00297702 IPI:IPI00871736 IPI:IPI00885196 RefSeq:NP_057209.3
UniGene:Hs.531701 ProteinModelPortal:Q5M7Z0 SMR:Q5M7Z0
IntAct:Q5M7Z0 PhosphoSite:Q5M7Z0 DMDM:121947809 PRIDE:Q5M7Z0
DNASU:51136 Ensembl:ENST00000305783 Ensembl:ENST00000482446
GeneID:51136 KEGG:hsa:51136 UCSC:uc002iya.3 UCSC:uc002iyd.4
GeneCards:GC17M058029 HGNC:HGNC:30206 HPA:HPA013739
neXtProt:NX_Q5M7Z0 PharmGKB:PA162401921 InParanoid:Q5M7Z0
GenomeRNAi:51136 NextBio:53987 ArrayExpress:Q5M7Z0 Bgee:Q5M7Z0
CleanEx:HS_RNFT1 Genevestigator:Q5M7Z0 Uniprot:Q5M7Z0
Length = 435
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 243 LHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTA 302
L+LI +L E F + R + + +I AS + D C IC+ E
Sbjct: 330 LYLILKLLEFFGHLRT----FRQVLRIFFTQPSYGVAASKRQCSDVDDICSICQAEFQKP 385
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRALV 333
LIC H+F C+ W R+ TCP CR ++
Sbjct: 386 ILLICQHIFCEECMTLWFNREKTCPLCRTVI 416
>TAIR|locus:2081740 [details] [associations]
symbol:ATL5 "AtL5" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006461 "protein complex assembly"
evidence=TAS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 EMBL:AL162651 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000034169 EMBL:AF132015 EMBL:BT009649
IPI:IPI00522876 PIR:T48058 RefSeq:NP_191828.1 UniGene:At.4826
ProteinModelPortal:Q9LZJ6 SMR:Q9LZJ6 EnsemblPlants:AT3G62690.1
GeneID:825443 KEGG:ath:AT3G62690 GeneFarm:4973 TAIR:At3g62690
eggNOG:NOG304339 InParanoid:Q9LZJ6 OMA:PMEACER
ProtClustDB:CLSN2683616 Genevestigator:Q9LZJ6 GermOnline:AT3G62690
Uniprot:Q9LZJ6
Length = 257
Score = 113 (44.8 bits), Expect = 0.00089, P = 0.00089
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 290 STCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCRALVVPPE---NGASTAGV 345
S C+ EE + L CGH+FHV C+ +W + +CP CRA V P + A V
Sbjct: 114 SVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAV 173
Query: 346 QHGQRP--DTHQSGTATANTASQGSANDAANNN 376
+P DT ++G+++++ S+ S +++ +
Sbjct: 174 FPSVKPIEDT-EAGSSSSSDESESSTPSSSSGS 205
>TAIR|locus:2176436 [details] [associations]
symbol:AT5G43420 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025638 UniGene:At.7156 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:BT008334 IPI:IPI00524721
RefSeq:NP_199155.1 UniGene:At.30118 ProteinModelPortal:Q9LSW9
SMR:Q9LSW9 PaxDb:Q9LSW9 EnsemblPlants:AT5G43420.1 GeneID:834362
KEGG:ath:AT5G43420 TAIR:At5g43420 HOGENOM:HOG000034161
InParanoid:Q9LSW9 OMA:PIFKFKK PhylomeDB:Q9LSW9
ProtClustDB:CLSN2681784 Genevestigator:Q9LSW9 Uniprot:Q9LSW9
Length = 375
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 24/80 (30%), Positives = 34/80 (42%)
Query: 258 IRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMTTAKKLI----CGHLFHV 313
IR +++K + F EE + C +C E +KL C HLFH+
Sbjct: 104 IRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHI 163
Query: 314 HCLRSWLERQHTCPTCRALV 333
C+ WL+ CP CR V
Sbjct: 164 DCIDVWLQNNANCPLCRTRV 183
>UNIPROTKB|B1AM81 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161792 EMBL:AL354935 UniGene:Hs.333503 HGNC:HGNC:18052
HOGENOM:HOG000231638 HOVERGEN:HBG059283 ChiTaRS:RNF38
IPI:IPI00744793 SMR:B1AM81 Ensembl:ENST00000377870
Ensembl:ENST00000377877 UCSC:uc003zzl.3 Uniprot:B1AM81
Length = 439
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICR---EEMTTA 302
E YE N R+ + + R +T ++ P +P + + C++C E
Sbjct: 342 ENYEALLNLAERLGE-AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLL 400
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+ L C H FH C+ WL+ TCP CRA
Sbjct: 401 RVLPCNHEFHAKCVDKWLKANRTCPICRA 429
>UNIPROTKB|E2QZ01 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Ensembl:ENSCAFT00000013305 Uniprot:E2QZ01
Length = 381
Score = 116 (45.9 bits), Expect = 0.00092, P = 0.00092
Identities = 46/167 (27%), Positives = 74/167 (44%)
Query: 223 LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASP 282
L L YL FL+I G+ L LI T F ++ R ++ + + P
Sbjct: 178 LPLEYYLIPFLIIV---GICLILIVIFMIT--KF-VQDRHRARRNRLRKDQLKKLPVHKF 231
Query: 283 EELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER-QHTCPTCRALVVPPEN 338
++ D D C IC +E KL C H +H C+ WL + + TCP C+ VVP +
Sbjct: 232 KKGDEYD-VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ- 289
Query: 339 GASTAGVQHGQRPDTHQSGT------ATANTASQGSANDA-ANNNLT 378
G S + Q + T A+ +T S G+ +++ ++ N+T
Sbjct: 290 GDSDSDTDSSQEENEVSEHTPLLRPLASVSTQSFGALSESRSHQNMT 336
>UNIPROTKB|F6XCX3 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
CTD:11342 KO:K15692 OMA:MGSNDID Ensembl:ENSCAFT00000013305
EMBL:AAEX03013674 EMBL:AAEX03013676 EMBL:AAEX03013675
RefSeq:XP_534303.1 ProteinModelPortal:F6XCX3 GeneID:477109
KEGG:cfa:477109 Uniprot:F6XCX3
Length = 381
Score = 116 (45.9 bits), Expect = 0.00092, P = 0.00092
Identities = 46/167 (27%), Positives = 74/167 (44%)
Query: 223 LHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASP 282
L L YL FL+I G+ L LI T F ++ R ++ + + P
Sbjct: 178 LPLEYYLIPFLIIV---GICLILIVIFMIT--KF-VQDRHRARRNRLRKDQLKKLPVHKF 231
Query: 283 EELDASDSTCIICREEMTTAKKLI---CGHLFHVHCLRSWLER-QHTCPTCRALVVPPEN 338
++ D D C IC +E KL C H +H C+ WL + + TCP C+ VVP +
Sbjct: 232 KKGDEYD-VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ- 289
Query: 339 GASTAGVQHGQRPDTHQSGT------ATANTASQGSANDA-ANNNLT 378
G S + Q + T A+ +T S G+ +++ ++ N+T
Sbjct: 290 GDSDSDTDSSQEENEVSEHTPLLRPLASVSTQSFGALSESRSHQNMT 336
>UNIPROTKB|F1MFA2 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9913 "Bos
taurus" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
IPI:IPI00693096 OMA:DPDQEPP GeneTree:ENSGT00700000104290
EMBL:DAAA02008904 Ensembl:ENSBTAT00000017277 Uniprot:F1MFA2
Length = 115
Score = 94 (38.1 bits), Expect = 0.00096, P = 0.00096
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 257 RIRVADYVRY-RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFH 312
+IR+A + + + + D D S +++ C+IC + + L C H++H
Sbjct: 28 QIRIAQRIGLIQHLPKGVYDPGRDGSEKKI----RECVICMMDFVYGDPIRFLPCMHIYH 83
Query: 313 VHCLRSWLERQHTCPTC 329
+ C+ WL R TCP+C
Sbjct: 84 LDCIDDWLMRSFTCPSC 100
>UNIPROTKB|F1P8Z8 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:AAEX03009717
Ensembl:ENSCAFT00000006260 Uniprot:F1P8Z8
Length = 129
Score = 94 (38.1 bits), Expect = 0.00096, P = 0.00096
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 257 RIRVADYVRY-RKITSNMNDRFPDASPEELDASDSTCIICREEMTTA---KKLICGHLFH 312
+IR+A + + + + D D S +++ C+IC + + L C H++H
Sbjct: 42 QIRIAQRIGLIQHLPKGVYDPGRDGSEKKI----RECVICMMDFVYGDPIRFLPCMHIYH 97
Query: 313 VHCLRSWLERQHTCPTC 329
+ C+ WL R TCP+C
Sbjct: 98 LDCIDDWLMRSFTCPSC 114
>UNIPROTKB|F1NND0 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:AADN02065332
IPI:IPI00598802 Ensembl:ENSGALT00000024714 Uniprot:F1NND0
Length = 459
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 248 ELYETFRNFRIRVADYVRYRKITSNMNDRFPDA--SPEELDASDSTCIICR---EEMTTA 302
E YE N R+ + + R +T ++ P +P + + C++C E
Sbjct: 364 ENYEALLNLAERLGE-AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLL 422
Query: 303 KKLICGHLFHVHCLRSWLERQHTCPTCRA 331
+ L C H FH C+ WL+ TCP CRA
Sbjct: 423 RVLPCNHEFHAKCVDKWLKANRTCPICRA 451
>UNIPROTKB|Q9P0P0 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC016753 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN EMBL:AF151072
EMBL:CR457165 EMBL:AK222700 EMBL:BC002803 IPI:IPI00292354
RefSeq:NP_057578.1 UniGene:Hs.356187 ProteinModelPortal:Q9P0P0
SMR:Q9P0P0 IntAct:Q9P0P0 STRING:Q9P0P0 PhosphoSite:Q9P0P0
DMDM:74761852 PaxDb:Q9P0P0 PRIDE:Q9P0P0 DNASU:51255
Ensembl:ENST00000306368 GeneID:51255 KEGG:hsa:51255 UCSC:uc002spv.1
GeneCards:GC02P085822 HGNC:HGNC:28037 HPA:HPA046112 MIM:612490
neXtProt:NX_Q9P0P0 PharmGKB:PA162401586 InParanoid:Q9P0P0
PhylomeDB:Q9P0P0 GenomeRNAi:51255 NextBio:54406 ArrayExpress:Q9P0P0
Bgee:Q9P0P0 CleanEx:HS_RNF181 Genevestigator:Q9P0P0 Uniprot:Q9P0P0
Length = 153
Score = 104 (41.7 bits), Expect = 0.00097, P = 0.00097
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 292 CIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
C++ EE TA ++ C HLFH C+ WL + ++CP CR
Sbjct: 79 CLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCR 117
>FB|FBgn0035233 [details] [associations]
symbol:Pex10 "Peroxin 10" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048137
"spermatocyte division" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0007285 "primary spermatocyte
growth" evidence=IMP] [GO:0007112 "male meiosis cytokinesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:AE014296
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558 GO:GO:0007112
InterPro:IPR017907 GO:GO:0048137 GO:GO:0007285 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 EMBL:AY069290 RefSeq:NP_647624.1
UniGene:Dm.2194 SMR:Q9W0D7 IntAct:Q9W0D7 MINT:MINT-1647351
EnsemblMetazoa:FBtr0072743 EnsemblMetazoa:FBtr0333397 GeneID:38182
KEGG:dme:Dmel_CG7864 UCSC:CG7864-RA FlyBase:FBgn0035233
InParanoid:Q9W0D7 OrthoDB:EOG4ZS7K2 GenomeRNAi:38182 NextBio:807389
Uniprot:Q9W0D7
Length = 299
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 280 ASPEELDASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
+S +++D + CI+C E + + CGH+F CL WLE + CP CR
Sbjct: 234 SSTKDVDPNTPQCILCLEPRSDSSLTPCGHIFCWSCLLEWLEERDECPLCR 284
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.135 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 573 523 0.00090 119 3 11 22 0.46 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 228
No. of states in DFA: 616 (65 KB)
Total size of DFA: 289 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.00u 0.08s 45.08t Elapsed: 00:00:08
Total cpu time: 45.04u 0.08s 45.12t Elapsed: 00:00:09
Start: Tue May 21 12:01:18 2013 End: Tue May 21 12:01:27 2013
WARNINGS ISSUED: 1