Citrus Sinensis ID: 008219


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570---
MAKASAANSGPGGKTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERGLTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSSAIRVTRKRRIDRKKQQAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLYK
ccccccccccccccccEEEEEEccccccHHHHHHHHHccccccccccccccccccccccccCEEEEEEEcccccccccHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHcHHHHHHHHHcEEEEccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccccccccccccEEccHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccHHHHccccccEEEEEEEccccccHHHHHHHHHcccccccccccccccEEEEEEEccccCEEEEEEEEcccHHHHHHcccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccHHHHHHHHcHHHHHHHHHHHcc
***************GVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERGLTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSSAIR***************RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLYK
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MAKASAANSGPGGKTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERGLTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALMTLLDPARSVENLIYIGYPGDPSSAIRVTRKRRIDRKKQQAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLYK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Mitochondrial Rho GTPase 2 Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.probableQ5ZM83
Mitochondrial Rho GTPase Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.probableQ94263
Mitochondrial Rho GTPase Mitochondrial GTPase involved in mitochondrial trafficking. Milt and Miro form an essential protein complex that links Khc to mitochondria for light chain-independent, anterograde transport of mitochondria. Required for axonal transport to synapses within nerve terminals. Required presynaptically but not postsynaptically at neuromuscular junctions (NMJs).probableQ8IMX7

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3Q3J, chain B
Confidence level:very confident
Coverage over the Query: 16-181
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Template: 2ATV, chain A
Confidence level:very confident
Coverage over the Query: 427-572
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Template: 3GEE, chain A
Confidence level:confident
Coverage over the Query: 14-37,55-69,82-228
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Template: 2XEX, chain A
Confidence level:confident
Coverage over the Query: 13-47,60-255
View the alignment between query and template
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Template: 1NYA, chain A
Confidence level:confident
Coverage over the Query: 196-279,315-381
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Template: 3K21, chain A
Confidence level:probable
Coverage over the Query: 194-347
View the alignment between query and template
View the model in PyMOL