BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008221
(573 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/570 (86%), Positives = 533/570 (93%)
Query: 1 MGTERKRKVSLFDVVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILE 60
MGTERKRKVSLFDV+++ S+S+K K+NG+G A ++LIN+WNGK YSQRY+EILE
Sbjct: 1 MGTERKRKVSLFDVMEDPSLSSKNTKSNGLGLAAAAGGGSNLINKWNGKAYSQRYFEILE 60
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
KR+ LPVW QK++FL L +NQ +ILVGETGSGKTTQIPQFVL+ V + D+ RK ++
Sbjct: 61 KRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVG 120
Query: 121 CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP 180
CTQPRRVAAMSVSRRVA+EMDV+IGEEVGYSIRFEDC+S+RT+LKYLTDGMLLREAM DP
Sbjct: 121 CTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADP 180
Query: 181 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
LLERYKVI+LDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YF GAPL
Sbjct: 181 LLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPL 240
Query: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKIT 300
MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILVFLTGEEEIEDACRKI
Sbjct: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 300
Query: 301 KEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLT 360
KE++N+GDQVGPVKVVPLYSTLPPAMQQKIF+PAP P EGGP GRKIVVSTNIAETSLT
Sbjct: 301 KEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 361 IDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKS 420
IDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLYTEKS
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
Query: 481 DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKA 540
DD+GNLT+ GE MSEFPLDPQMSKML+ SP++NCSNEILS+SAMLSVPNCFVRPREAQKA
Sbjct: 481 DDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKA 540
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
ADEAKARFGHIDGDHLTLLNVYHAYKQN++
Sbjct: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQNNE 570
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/529 (71%), Positives = 455/529 (86%), Gaps = 5/529 (0%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQPRRVAAMSV++RVA+EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQN 410
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
G GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 411 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN +
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/529 (71%), Positives = 455/529 (86%), Gaps = 5/529 (0%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQPRRVAAMSV++RVA+EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQN 410
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
G GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 411 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN +
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/529 (71%), Positives = 455/529 (86%), Gaps = 5/529 (0%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + P++ RYY+IL+KR LPVW+ K+ F +L +Q +LVGETGSGKTTQIPQ+
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
+E + P +R +ACTQPRRVAAMSV++RVA+EMDV +G+EVGYSIRFEDCSSA+T
Sbjct: 175 VEYMR-SLPGPKRG--VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKT 231
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM DPLLERY VI+LDEAHERTLATD+L G+LKEV++ R DLK++VM
Sbjct: 232 ILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVM 291
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPS-GD 281
SATL+A KFQ YF PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIHMCE GD
Sbjct: 292 SATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGD 351
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
+L+FLTG+EEI++AC++I +E+ ++G +VG +K++PLYSTLPP QQ+IFEP PPP K+
Sbjct: 352 LLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQN 410
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
G GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLV+ ISKASA QR+
Sbjct: 411 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTEK++ ++Q TYPEILRSNL + VL LKKLGIDDLVHFDFMDP
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPETLMRALE+LNYL AL+DDG+LTE+G M+EFPLDPQ++KM++ S YNCSNE+LSI
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN +
Sbjct: 591 TAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHE 639
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/531 (68%), Positives = 443/531 (83%), Gaps = 4/531 (0%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN +N +P+S RY+ I EKR LPVW+ KE+F+++L+ NQ I LVGETGSGKTTQIPQ+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 103 LEGVDIETPDRRRKM--MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSA 160
+E + + + ++ACTQPRRVAAMSV+ RVAEEMDV +G+EVGYSIRFEDC S
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173
Query: 161 RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLV 220
RTVLKY TDGMLLREAM PLL++YKV++LDEAHERTLATD+L GL+KE+++NR D+K+V
Sbjct: 174 RTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVV 233
Query: 221 VMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-S 279
+MSATL+A KFQ YF PL+ VPGR PVEIF+T E+DYLEAAIRTV+QIHM E
Sbjct: 234 IMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVE 293
Query: 280 GDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSK 339
GDIL+FLTG+EEIE+AC++I +EI +G G + +PLYSTLPPA QQ+IFEPAPP ++
Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPP-NR 352
Query: 340 EGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 399
G RK V+STNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV PISKASA Q
Sbjct: 353 PNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQ 412
Query: 400 RSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM 459
R+GRAGRT+PGKCFRLYTE ++ +++Q QTYPEILRSNL + VL LKKLG +DLVHFDFM
Sbjct: 413 RAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFM 472
Query: 460 DPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEIL 519
DPPAPETLMRALE+LNYL A++DDG LTE+G M+EFPLDPQ++KML+ S + NCSNEIL
Sbjct: 473 DPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEIL 532
Query: 520 SISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
SI+AMLSVP C+VRP E + ADEAKARF HIDGDHLTLLNVYH++KQN +
Sbjct: 533 SITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQE 583
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/525 (70%), Positives = 440/525 (83%), Gaps = 8/525 (1%)
Query: 44 NRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVL 103
N +N KP+SQ Y++ILE R+ LPV+QQ+EEFL++ NQ+I+ VGETGSGKTTQIPQFVL
Sbjct: 54 NFFNDKPFSQNYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVL 113
Query: 104 EGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTV 163
E P IACTQPRRVAAMSV++RVA+EMDV +GEEVGY+IRFEDCS T+
Sbjct: 114 YD---ELP-HLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTL 169
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
LKY+TDGMLLREAMTD +L RY I+LDEAHERTLATD+L GL+K + RPDLK++VMS
Sbjct: 170 LKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMS 229
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDIL 283
ATL+A+KFQ YF+ APL+ VPGR +PVEI+YTQEPERDYLEAA+RTV+QIH+ E GDIL
Sbjct: 230 ATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDIL 289
Query: 284 VFLTGEEEIEDACRKITKEITNMGDQ--VGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
VFLTGEEEIEDACRKIT E ++ + GP+KV PLY +LPP QQ+IFEP P +K G
Sbjct: 290 VFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSG 349
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
GRK+V+STNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPISKASA QR+
Sbjct: 350 Y--GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRA 407
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT+PGKCFRLYTE++F +L QTYPEILRSNL++TVL LKKLGIDDLVHFD+MDP
Sbjct: 408 GRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDP 467
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
PAPET+MRALE LNYL LDD+G+LT +G K SEFPLDP ++ ML+ SP++ CSNE+LS+
Sbjct: 468 PAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSL 527
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK 566
+A+LSVPN FVRP A+K ADE + +F H DGDHLTLLNVYHAYK
Sbjct: 528 TALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYK 572
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/532 (67%), Positives = 437/532 (82%), Gaps = 18/532 (3%)
Query: 39 NNSLINRW--NGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTT 96
+N I++W + +S+RYYEILEKRK LPVW+QKE+F++V+K NQV+ILVGETGSGKTT
Sbjct: 49 SNLTIDQWIPKKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTT 108
Query: 97 QIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFED 156
QIPQFV++ I R M+ TQPRRVAA+SV++RV+EEMD +GEEVGYSIRFE+
Sbjct: 109 QIPQFVVDAGLI-----RPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEE 163
Query: 157 CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 216
SSART +KYLTDGMLLRE+M+DP L +Y VI+LDEAHERTL+TD+LFGL+K++LK R D
Sbjct: 164 LSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKD 223
Query: 217 LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
LKL+VMSATLEA KFQ YF APL+KVPGRLHPVEIFYT+E +DYLE+A+RTV+ IH
Sbjct: 224 LKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTN 283
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPP 336
E +GDILVFLTGEEEIED C KI +E G + P+K +PLYS+LP Q KIF+
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTC-- 339
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
KE RK +VSTNIAETSLTIDGIV+V+DPGF+KQK YNPR RVESLLV+PISKAS
Sbjct: 340 --KE-----RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKAS 392
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A+QR+GRAGRT+PGKCFRLYTEK+F + QT+PEILRSNLA+ VL L KLG+ DLVHF
Sbjct: 393 ANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHF 452
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
DFMDPP P+TL+RALEVL+YLGALDD+G LTE+G MSEFPLDPQ+SKML+ S + +CSN
Sbjct: 453 DFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSN 512
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
EIL+I+AMLS PNCF+RP++ + AD AK F H DGDHLT+LNVYH++K+N
Sbjct: 513 EILTIAAMLSAPNCFMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKN 564
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/532 (66%), Positives = 433/532 (81%), Gaps = 16/532 (3%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
IN + G+ ++ +Y +IL+ R+ LPV Q++EFL++ + NQ+++ VGETGSGKTTQIPQFV
Sbjct: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
L E P +ACTQPRRVAAMSV++RVAEEMDV +GEEVGYSIRFE+ +S +T
Sbjct: 131 LFD---EMP-HLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT 186
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+LKY+TDGMLLREAM D L RY I+LDEAHERTLATD+L GLLK+V+K RPDLK+++M
Sbjct: 187 ILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIM 246
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
SATL+AEKFQ YF APL+ VPGR +PVE++YT E +RDYL++AIRTV+QIH E +GDI
Sbjct: 247 SATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDI 306
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQV------GPVKVVPLYSTLPPAMQQKIFEPAPP 336
L+FLTGE+EIEDA RKI+ E GDQ+ GP+ V PLY +LPP QQ+IFEPAP
Sbjct: 307 LLFLTGEDEIEDAVRKISLE----GDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP- 361
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
G PGRK+V+STNIAETSLTIDGIVYV+DPGF+KQKVYNPR+RVESLLVSPISKAS
Sbjct: 362 -ESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGRT+PGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHF
Sbjct: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
DFMDPPAPET+MRALE LNYL LDD+GNLT +G S+FPLDP ++ ML+ S ++ CS
Sbjct: 481 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ 540
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
EIL+I AMLSVPN F+RP + +K AD+AK F H DGDH+TLLNVYHA+K +
Sbjct: 541 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSD 592
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/408 (76%), Positives = 361/408 (88%), Gaps = 2/408 (0%)
Query: 164 LKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMS 223
+KY+TDGMLLRE MTDPLLERY VI+LDEAHERT+ATD+L GLLKEV K R DLKLVVMS
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 224 ATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDI 282
ATL+A KFQ YF APLM VPGR HPVEIFYT EPERDYLEAAIRTVVQIHMCE GD+
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 342
L+FLTG+EEIE+AC++I +E+ N+G +VG +K +PLYSTLPPAMQQ+IFE APP +K G
Sbjct: 121 LLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPP-NKANG 179
Query: 343 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
GRK+VVSTNIAETSLTIDG+V+VIDPGFAKQKVYNPR+RVESLLVSPISKASA QR G
Sbjct: 180 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVG 239
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
RAGRT+PGKCFRLYTEK++++++Q TYPEILRSNL VL LKKLGIDDLVHFDFMDPP
Sbjct: 240 RAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPP 299
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APETLMRALE+LNYLGALDD G+LT +G M+EFPLDPQ++KM++ S Y+CSNEILS++
Sbjct: 300 APETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVT 359
Query: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
AMLSVP CF+RP EA+K ADEAK RF HIDGDHLTLLNVYHA+KQN++
Sbjct: 360 AMLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNE 407
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 620 bits (1598), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/514 (57%), Positives = 397/514 (77%), Gaps = 14/514 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R+SLP++ +E FLQ + +Q+++++GETGSGKTTQ+ Q++ E +
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEA------GYGTRG 554
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSVS+RVAEE +G+EVGY+IRFEDC+S T++K++TDG+LLRE +
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP L Y VI+LDEAHERT++TDVLFGLLK+ L+ RP+LK+++ SATLEAEKF YF
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
A L +PGR PV+I YT++PE DYL+A++ TV+QIH+ EP GDIL+FLTG+EEI+ AC+
Sbjct: 675 AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + + ++G V + ++P+YS LP MQ KIFEPAPP S RK+V++TNIAET
Sbjct: 735 ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGS-------RKVVIATNIAET 787
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI YVIDPGF+KQK +NP+ ++SL+V+PIS+A+A QRSGRAGRT PGKC+RLYT
Sbjct: 788 SLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYT 847
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E +F N++ + PEI R+NL NTVLT+K +GI+DL++FDFMDPP +TL+ A+E L L
Sbjct: 848 ESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSL 907
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD++G LT +G KM+EFPLDPQ+SKML+ S CS+EIL++ AMLSV N F RP+E
Sbjct: 908 GALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEK 967
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNSKI 571
Q AD+ KA+F +GDHLTLLNVY ++K NSK
Sbjct: 968 QALADQKKAKFFQPEGDHLTLLNVYESWK-NSKF 1000
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/509 (56%), Positives = 392/509 (77%), Gaps = 12/509 (2%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E+R+ LPV++ +++FL+ + NQ+++L+GETGSGKTTQI Q++ E + T D + MI
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAE--EGYTSDSK---MI 559
Query: 120 ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
CTQPRRVAAMSV++RVAEE+ +GEEVGY+IRFED +S T +KY+TDGML RE + D
Sbjct: 560 GCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVD 619
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
PLL +Y VI+LDEAHERT+ATDVLFGLLK + RPDLKL+V SATL+AE+F YFY P
Sbjct: 620 PLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCP 679
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
+ +PGR +PVEI YT++PE DYL+AA+ TV+QIH+ E GDILVFLTG+EEI+ +C +
Sbjct: 680 IFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEIL 739
Query: 300 TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSL 359
+ +GD + + ++P+YS LP +Q +IFEPAP P GRK+V++TNIAETSL
Sbjct: 740 YERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAP-------PGGRKVVIATNIAETSL 792
Query: 360 TIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 419
TIDGI YV+DPGF KQ ++P++ ++SL+V+PIS+A A QRSGRAGRT PGKC+RLYTE
Sbjct: 793 TIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTES 852
Query: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
++ N++ P PEI R NL++T+L LK +GI+DL++FDFMDPP +T++ AL+ L L A
Sbjct: 853 AYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSA 912
Query: 480 LDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQK 539
LDD+G LT +G KM++FP++PQ+SK+L+ S + CS E+LSI AMLSVPN + RPRE Q+
Sbjct: 913 LDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQ 972
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAYKQN 568
AD +A+F + + DHLTLLNVY +K N
Sbjct: 973 EADRQRAQFANPESDHLTLLNVYTTWKMN 1001
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 609 bits (1571), Expect = e-173, Method: Compositional matrix adjust.
Identities = 298/555 (53%), Positives = 404/555 (72%), Gaps = 25/555 (4%)
Query: 22 AKLVKTNGVGPGAMMNNNNSLINRW-------NGKPYSQR-YYEILEKRKSLPVWQQKEE 73
+ + N G G M N+ I W N Y ++ ILE+R+SLP+++ KE+
Sbjct: 542 GRQIAANMRGIGMMPND----IPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQ 597
Query: 74 FLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVS 133
+Q + NQ++I++GETGSGKTTQI Q++ E + I CTQPRRVAAMSV+
Sbjct: 598 LVQAVHDNQILIVIGETGSGKTTQITQYLAEA------GYTSRGKIGCTQPRRVAAMSVA 651
Query: 134 RRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEA 193
+RV+EE +G+EVGY+IRFEDC+S TV+KY+TDGMLLRE + DP L +Y +I+LDEA
Sbjct: 652 KRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEA 711
Query: 194 HERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIF 253
HERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF YFY AP+ +PGR +PVEI
Sbjct: 712 HERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 771
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPV 313
YT+EPE DYL+A++ TV+QIH+ EP GDILVFLTG+EEI+ AC + + + ++G V +
Sbjct: 772 YTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPEL 831
Query: 314 KVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
++P+YS LP MQ +IF+PAPP S RK+V++TNIAETSLTIDGI YV+DPGF
Sbjct: 832 IILPVYSALPSEMQTRIFDPAPPGS-------RKVVIATNIAETSLTIDGIYYVVDPGFV 884
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
KQKVYN + ++ L+V+PIS+A A QR+GRAGRT PGKC+RLYTE+++ +++ PEI
Sbjct: 885 KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI 944
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
R+NLA+TVL+LK +GI+DL+ FDFMD P ETL+ A+E L LGALDD+G LT +G +M
Sbjct: 945 QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRM 1004
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG 553
+EFPL+P + KML+ S CS E+L+I +MLSV N F RP++ Q AD+ KA+F +G
Sbjct: 1005 AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEG 1064
Query: 554 DHLTLLNVYHAYKQN 568
DHLTLL VY+++K N
Sbjct: 1065 DHLTLLAVYNSWKNN 1079
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 609 bits (1571), Expect = e-173, Method: Compositional matrix adjust.
Identities = 298/555 (53%), Positives = 404/555 (72%), Gaps = 25/555 (4%)
Query: 22 AKLVKTNGVGPGAMMNNNNSLINRW-------NGKPYSQR-YYEILEKRKSLPVWQQKEE 73
+ + N G G M N+ I W N Y ++ ILE+R+SLP+++ KE+
Sbjct: 518 GRQIAANMRGIGMMPND----IPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQ 573
Query: 74 FLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVS 133
+Q + NQ++I++GETGSGKTTQI Q++ E + I CTQPRRVAAMSV+
Sbjct: 574 LVQAVHDNQILIVIGETGSGKTTQITQYLAEA------GYTSRGKIGCTQPRRVAAMSVA 627
Query: 134 RRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEA 193
+RV+EE +G+EVGY+IRFEDC+S TV+KY+TDGMLLRE + DP L +Y +I+LDEA
Sbjct: 628 KRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEA 687
Query: 194 HERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIF 253
HERT+ TDVLFGLLK+ ++ R D+KL+V SATL+A KF YFY AP+ +PGR +PVEI
Sbjct: 688 HERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEIL 747
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPV 313
YT+EPE DYL+A++ TV+QIH+ EP GDILVFLTG+EEI+ AC + + + ++G V +
Sbjct: 748 YTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPEL 807
Query: 314 KVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
++P+YS LP MQ +IF+PAPP S RK+V++TNIAETSLTIDGI YV+DPGF
Sbjct: 808 IILPVYSALPSEMQTRIFDPAPPGS-------RKVVIATNIAETSLTIDGIYYVVDPGFV 860
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
KQKVYN + ++ L+V+PIS+A A QR+GRAGRT PGKC+RLYTE+++ +++ PEI
Sbjct: 861 KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI 920
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
R+NLA+TVL+LK +GI+DL+ FDFMD P ETL+ A+E L LGALDD+G LT +G +M
Sbjct: 921 QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRM 980
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDG 553
+EFPL+P + KML+ S CS E+L+I +MLSV N F RP++ Q AD+ KA+F +G
Sbjct: 981 AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEG 1040
Query: 554 DHLTLLNVYHAYKQN 568
DHLTLL VY+++K N
Sbjct: 1041 DHLTLLAVYNSWKNN 1055
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 609 bits (1571), Expect = e-173, Method: Compositional matrix adjust.
Identities = 292/509 (57%), Positives = 386/509 (75%), Gaps = 13/509 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E+R+SLP+++ K+E +Q + NQV++++GETGSGKTTQ+ Q++ E K
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA------GYTTKG 561
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSV++RVAEE +GEEVGY+IRFEDC+ TV+KY+TDGMLLRE +
Sbjct: 562 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 621
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
D L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SATL+AEKF GYF+
Sbjct: 622 IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFN 681
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
+ +PGR PVEI YT++PE DYL+AA+ TV+QIH+ EP GDILVFLTG+EEI+ AC+
Sbjct: 682 CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQ 741
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + + +G V + ++P+YS LP MQ +IF+P PPP K RK+VV+TNIAE
Sbjct: 742 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP-PPPGK------RKVVVATNIAEA 794
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI YV+DPGFAKQ VYNP+ +ESL+++PIS+ASA QR+GRAGRT PGKC+RLYT
Sbjct: 795 SLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYT 854
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP P+ L+ A+E L L
Sbjct: 855 ESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSL 914
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD++G LT++G KM+EFPL+P +SKML+ S CS+EIL++ AM+ N F RPRE
Sbjct: 915 GALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREK 974
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYK 566
Q AD+ +A+F +GDHLTLL VY A+K
Sbjct: 975 QAQADQKRAKFFQPEGDHLTLLAVYEAWK 1003
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/512 (56%), Positives = 385/512 (75%), Gaps = 14/512 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E RKSLPV+ +E+ + ++ QV+I+VGETGSGKTTQIPQ++ E +T
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK----- 514
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSV+ RVAEE+ +G EVGYSIRFEDC+S +TVL+Y+TDGML+RE +
Sbjct: 515 -IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFL 573
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
T P L Y V+++DEAHERTL TD+LFGLLK++ + RPDLKL++ SAT++AE+F YF G
Sbjct: 574 TAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDG 633
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
AP +PGR + V YTQ PE DYL+AA+ TV+QIH+ EP GDILVFLTG+EE++ A
Sbjct: 634 APTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAE 693
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ +G ++ + + +YSTLP +Q KIFEP PP + RK+V++TNIAET
Sbjct: 694 MLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNA-------RKVVLATNIAET 746
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI+YVIDPGF KQK++NPR +ESL+++P+S+ASA+QR GRAGR PGKCFRL+T
Sbjct: 747 SLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFT 806
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+F+N+L+ T PEI R+NL N VL LK +GI+DL++FDFMDPP +TL+ ALE L L
Sbjct: 807 AWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYAL 866
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPRE 536
GAL+D G LT++G KM+EFP+DPQ+SKM++ S KY CS EIL+I AMLSV N F RP++
Sbjct: 867 GALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKD 926
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
AAD A+ F H GDHLTL+NV++ ++++
Sbjct: 927 KAFAADAARKLFFHPQGDHLTLMNVFNQWRES 958
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 589 bits (1519), Expect = e-167, Method: Compositional matrix adjust.
Identities = 278/511 (54%), Positives = 383/511 (74%), Gaps = 13/511 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
++E+R+SLP++ K+ ++ + NQ++++VGETGSGKTTQ+ Q+ +E R+
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEA------GLGRRG 586
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSV++RVAEE +G +VGY+IRFEDC+S T++KY+TDGMLLRE +
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP L Y +I+LDEAHERT+ TDVLFGLLK + RP+LKL++ SATL++ KF YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
AP+ +PGR PVEI YT+EPE DYLEAA TV+QIH+ EP GD+LVFLTG+EEI+ +C
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + + +MG V + ++P+Y LP MQ +IF+PAP RK+V++TNIAET
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK-------RKVVIATNIAET 819
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLTIDGI YV+DPGF KQK+YNP+ ++SL+V+PIS+A+A QRSGRAGRT PGKC+RLYT
Sbjct: 820 SLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYT 879
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E++F +++ P PEI R+NLA+T+L LK +GI++L+ FDFMD P ++++ AL L+ L
Sbjct: 880 ERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTL 939
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
ALD DG LT++G +M+EFPL+P +SK+L+ S CS E+L+I AML+V N F RP+E
Sbjct: 940 SALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEK 999
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
Q AD+ KA+F +GDHLTLL VY+++K +
Sbjct: 1000 QDHADQKKAKFHQPEGDHLTLLAVYNSWKNH 1030
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/508 (56%), Positives = 375/508 (73%), Gaps = 13/508 (2%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
R+SLPV+ +EE L + +Q++I+ GETGSGKTTQIPQ++ E + + M IAC
Sbjct: 400 RRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-----KGMKIAC 454
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRRVAAMSV+ RVA EM V +G EVGYSIRFEDC+S RTVL+Y+TDGMLLRE +++P
Sbjct: 455 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 514
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SATL+ +F +F AP+
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVF 574
Query: 242 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK 301
++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC +
Sbjct: 575 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 634
Query: 302 EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTI 361
+G ++ + V+P+Y+ LP MQ +IF+P PP + RK+VV+TNIAETSLTI
Sbjct: 635 RCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTI 687
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++
Sbjct: 688 EGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAY 747
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+
Sbjct: 748 QHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALN 807
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKA 540
G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++
Sbjct: 808 HLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVH 867
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQN 568
AD A+ F GDHL LLNVY + ++
Sbjct: 868 ADNARVNFFLPGGDHLVLLNVYTQWAES 895
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/508 (56%), Positives = 374/508 (73%), Gaps = 13/508 (2%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E + M IAC
Sbjct: 399 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTN-----KGMKIAC 453
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRRVAAMSV+ RVA EM V +G EVGYSIRFEDC+S RTVL+Y+TDGMLLRE +++P
Sbjct: 454 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 513
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F AP+
Sbjct: 514 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVF 573
Query: 242 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK 301
++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC +
Sbjct: 574 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 633
Query: 302 EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTI 361
+G ++ + V+P+Y+ LP MQ +IF+P PP + RK+VV+TNIAETSLTI
Sbjct: 634 RCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTI 686
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++
Sbjct: 687 EGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAY 746
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+
Sbjct: 747 QHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALN 806
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKA 540
G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++
Sbjct: 807 HLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVH 866
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQN 568
AD A+ F GDHL LLNVY + ++
Sbjct: 867 ADNARVNFFLPGGDHLVLLNVYTQWAES 894
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/508 (56%), Positives = 374/508 (73%), Gaps = 13/508 (2%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
R+SLPV+ +EE L + +QV+I+ GETGSGKTTQIPQ++ E + M IAC
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTN-----KGMKIAC 450
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRRVAAMSV+ RVA EM V +G EVGYSIRFEDC+S RTVL+Y+TDGMLLRE +++P
Sbjct: 451 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 510
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L Y V+++DEAHERTL TD+LFGL+K+V + RP+LK++V SAT++ +F +F AP+
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVF 570
Query: 242 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK 301
++PGR PV+IFYT+ PE DYLEA + +V+QIH+ +P GDILVFLTG+EEIE AC +
Sbjct: 571 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 630
Query: 302 EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTI 361
+G ++ + V+P+Y+ LP MQ +IF+P PP + RK+VV+TNIAETSLTI
Sbjct: 631 RCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA-------RKVVVATNIAETSLTI 683
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
+GI+YV+DPGF KQK YNPR +ESL V+P SKASA+QR+GRAGR GKCFRLYT ++
Sbjct: 684 EGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAY 743
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
++L+ T PEI R++L N VL LK LGI DL+HFDF+DPP ETL+ ALE L LGAL+
Sbjct: 744 QHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALN 803
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNC-FVRPREAQKA 540
G LT G KM+E P+DP +SKM++ S KY+CS EIL+++AMLSV N F RP++
Sbjct: 804 HLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVH 863
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAYKQN 568
AD A+ F GDHL LLNVY + ++
Sbjct: 864 ADNARVNFFLPGGDHLVLLNVYTQWAES 891
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 570 bits (1470), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/505 (54%), Positives = 376/505 (74%), Gaps = 13/505 (2%)
Query: 62 RKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIAC 121
RKSLPV+Q K++ L+ + QV+++V ETGSGKTTQ+PQF+ E + + I C
Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKK-----ICC 469
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRRVAAMSV+ RVA+EMDV +G+EVGYSIRFE+ +S +TV+KYLTDGMLLRE +T+P
Sbjct: 470 TQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPD 529
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLM 241
L Y VI++DEAHERTL TD+LFGL+K++ + RPDLK+++ SAT++AEKF YF AP+
Sbjct: 530 LASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVF 589
Query: 242 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITK 301
VPGR +PV+I+YT +PE +Y++AAI T++QIH +P+GDILVFLTG++EIE + +
Sbjct: 590 YVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649
Query: 302 EITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTI 361
+G ++ + + P+Y+ LP +Q KIF+P PP + RK+V++TNIAETS+TI
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGA-------RKVVLATNIAETSITI 702
Query: 362 DGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 421
DG+ +VID GF KQ +YNPR +ESL+ P S+ASA QR+GRAGR PGKCFRLYT +++
Sbjct: 703 DGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTY 762
Query: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 481
NN+L T PEI R+NL N VL LK LGI++L+ FDFMD P PETLMR+LE+L LGAL+
Sbjct: 763 NNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALN 822
Query: 482 DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML-SVPNCFVRPREAQKA 540
+ G LT++G +M+EFP DP +SK L+ S KY C E+LSI +ML + F RP++
Sbjct: 823 NRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIME 882
Query: 541 ADEAKARFGHIDGDHLTLLNVYHAY 565
AD+A+A F GDHLTLL++++ +
Sbjct: 883 ADKARANFTQPGGDHLTLLHIWNEW 907
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 567 bits (1461), Expect = e-161, Method: Compositional matrix adjust.
Identities = 270/510 (52%), Positives = 365/510 (71%), Gaps = 13/510 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I +R++LPV+ + E +Q ++ NQ +++VGETGSGKTTQI Q++ E
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDE------EGFSNYG 529
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQPRRVAA+SV++RVAEE+ +G +VGY+IRFED + T +KY+TDGML REA+
Sbjct: 530 MIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREAL 589
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
DP + +Y VI+LDEAHERT+ATDVLF LLK+ RP+LK++V SATL + KF YF
Sbjct: 590 LDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLN 649
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P++ +PG+ PVE+ Y+Q P+ DY+EAA+ V+ IH+ E GDILVFLTG+EEI+ C
Sbjct: 650 CPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCE 709
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ + +GD +G + ++P+YS LP +Q KIFEP P S RK+V +TNIAET
Sbjct: 710 ILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGS-------RKVVFATNIAET 762
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
S+TIDGI YV+DPGFAK +YN R +E L+VSPIS+A A+QR GRAGRT PGKC+RLYT
Sbjct: 763 SITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYT 822
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
E +F N++ T PEI R NL++T+L LK +GI+DL+ FDFMDPP ++ AL L +L
Sbjct: 823 ESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHL 882
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
+LDD+G LT +G++MS FP+DP +S+ L+ S CS+EI++I +MLSV N F RP++
Sbjct: 883 QSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDR 942
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQ 567
Q AD KA+F H GDHLTLLNVY ++Q
Sbjct: 943 QLEADSKKAKFHHPYGDHLTLLNVYTRWQQ 972
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 281/514 (54%), Positives = 375/514 (72%), Gaps = 14/514 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I E RKSLPV+ ++ F++ +K +QV+I+ GETGSGKTTQ+PQ++ E E R
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKR---- 412
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
I CTQPRRVAAMSV+ RVA+E+ +G +VGYSIRFEDC+S +TVLKY+TDGMLLRE +
Sbjct: 413 -IGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+P L Y V+++DEAHERTL TD+LFGL+K++ + R DLKL++ SATL+AEKF +F
Sbjct: 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD 531
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEEEIEDAC 296
AP+ ++PGR PV+I+YTQ PE DY++AAI T++QIH+ +P GDILVFLTG+EEIE
Sbjct: 532 APIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQ 591
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAE 356
+ + +G ++ + +P+Y+ LP +Q KIFEP P + RK+V++TNIAE
Sbjct: 592 EALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDA-------RKVVLATNIAE 644
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TS+TIDGI YVIDPGF+KQ ++ R VE L V ISKA+A+QR+GRAGRT PGKCFRLY
Sbjct: 645 TSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLY 704
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
T ++ ++L+ Q PEI R+NL N VL LK LGI DLVHFDF+DPP ETL+ ALE L
Sbjct: 705 TAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYA 764
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV-PNCFVRPR 535
LGAL+ G LT++G +M+EFP DP MSKM++ S KY CS EI++I+AMLS F RP+
Sbjct: 765 LGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPK 824
Query: 536 EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNS 569
AD A+ F GDH+TL+NVY+ ++++S
Sbjct: 825 AQVIHADSARKGFWSPAGDHITLMNVYNKWQESS 858
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 551 bits (1419), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/510 (52%), Positives = 374/510 (73%), Gaps = 15/510 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
I ++R+ LPV+ +++ + V++ N V+I+VGETGSGKTTQ+ Q++LE ++
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG------ 487
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
+I CTQPRRVAAMSV+RRVA+EM V +G++VGY+IRFEDC+S +T++KY+TDG+LLRE +
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
D L++Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++A+KF +F G
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGG 607
Query: 238 -APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDAC 296
P +PGR PVE+F+ + P DY++AA++ V IH+ GDIL+F+ G+E+IE C
Sbjct: 608 NCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTC 667
Query: 297 RKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAE 356
I +++ + D+ P+ V+P+YS LP +Q KIF+ AP GG RK +V+TNIAE
Sbjct: 668 EMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAP-----GGM--RKAIVATNIAE 719
Query: 357 TSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 416
TSLT+DGI++VIDPGF K KVYNPR+ +++L + P+S+ASA+QR+GRAGRT PG+C+RLY
Sbjct: 720 TSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLY 779
Query: 417 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
TE+ F ++L T PEI R+NLAN VL LK LG+DDL+ F FMD P + ++ ++ L
Sbjct: 780 TERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWT 839
Query: 477 LGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPRE 536
LGALD+ G LT MG KM EFPLDP +SKML+ S + CS+E+L+I +MLSVP F RP+
Sbjct: 840 LGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKG 899
Query: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYK 566
++ AD K +F + DHLT LNVY ++
Sbjct: 900 REEEADAKKEKFQVPESDHLTFLNVYIQWR 929
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/509 (50%), Positives = 367/509 (72%), Gaps = 14/509 (2%)
Query: 60 EKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMI 119
E+R+ LP + +E+ L V++ NQV+I+VGETGSGKTTQ+ QF+ E R MI
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYE------DGYHRNGMI 540
Query: 120 ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTD 179
CTQPRRVAAMSV++RV+EEM V +G VGYSIRFED + TV+KY+TDG+LLRE++
Sbjct: 541 GCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQ 600
Query: 180 PLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAP 239
LE+Y VI++DEAHER+L TD+L GLLK+VL R D+KL+V SAT+ ++KF +F GAP
Sbjct: 601 NNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAP 660
Query: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKI 299
+PGR +PV+I + + P DY+EAA+R V+QIH+ +P+GDILVF+TG+E+IE C I
Sbjct: 661 QFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEII 720
Query: 300 TKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSL 359
+ + D + ++P+YS +P +Q KIF+ A P RK+VV+TNIAETSL
Sbjct: 721 ADRLNQLHD-APRLSILPIYSQMPADLQAKIFDSAEPGV-------RKVVVATNIAETSL 772
Query: 360 TIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEK 419
T+ GI YV+D G+ K K+YN ++ +++L V+PIS+A+A+QR+GRAGRT PG +RLYTE
Sbjct: 773 TVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEM 832
Query: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
++ ++ T PEI R+NL+NTVL LK LG++++ FDFMD P +TLM +L L LGA
Sbjct: 833 AYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGA 892
Query: 480 LDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQK 539
LD+ G LT +G+KMS FP+DP +SK+++ + Y C+ EI++I +MLSVP+ F RP+E +
Sbjct: 893 LDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAE 952
Query: 540 AADEAKARFGHIDGDHLTLLNVYHAYKQN 568
+D A+ +F + DHL LLN+Y +++N
Sbjct: 953 ESDAAREKFNVPESDHLMLLNIYQHWQRN 981
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/512 (50%), Positives = 366/512 (71%), Gaps = 14/512 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E +
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG------ 578
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQPRRVAAMSV++RV+EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESL 638
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGN 698
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ AP RK +V+TNIAET
Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNS 569
++ +D+ + +F + DHLT LNVY +K N+
Sbjct: 991 EEESDQIREKFAVPESDHLTYLNVYLQWKNNN 1022
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 532 bits (1370), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/512 (50%), Positives = 366/512 (71%), Gaps = 14/512 (2%)
Query: 58 ILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKM 117
ILE+R+ LP++ ++E L +++ N ++I+VGETGSGKTTQ+ Q++ E +
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG------ 578
Query: 118 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 177
MI CTQPRRVAAMSV++RV+EEM +GEEVGY+IRFEDC+S T++KY+TDG+LLRE++
Sbjct: 579 MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESL 638
Query: 178 TDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 237
+ L+ Y I++DEAHER+L TDVLFGLL+EV+ R DLKL+V SAT++AEKF +F
Sbjct: 639 READLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGN 698
Query: 238 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
P+ +PGR PV+I +++ P+ DY+EAA++ +Q+H+ GDIL+F+ G+E+IE
Sbjct: 699 VPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+I + + + + + V+P+YS LP +Q KIF+ AP RK +V+TNIAET
Sbjct: 759 QIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-------RKCIVATNIAET 810
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 478 GALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
GALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 538 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNS 569
++ +D+ + +F + DHL+ LNVY +K N+
Sbjct: 991 EEESDQIREKFAVPESDHLSYLNVYLQWKNNN 1022
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/533 (46%), Positives = 366/533 (68%), Gaps = 16/533 (3%)
Query: 37 NNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTT 96
++N+S R P ++ +ILE+RK+LP+W+ + Q ++ N+VI++VGETGSGK+T
Sbjct: 70 SDNSSPEKRSENSPSKRK--DILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKST 127
Query: 97 QIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFED 156
QIPQF+ E P ++ +A TQPRRVAA+++++RVA E +GE+VGYSIRF+D
Sbjct: 128 QIPQFL-----NECP-YAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDD 181
Query: 157 CSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD 216
+S +T +KYLTDGMLLRE + DP+L +Y ++LDEAHERTL TD+L G +K+++K RP
Sbjct: 182 TTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPA 241
Query: 217 LKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
L++++MSATL AE+F +F GA + + GR +PV+I YT PE DYL+A +RT+ Q+H
Sbjct: 242 LRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTK 301
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPP 336
P GDILVFLTG++EIE I + + ++ PL+++LP Q ++F PA
Sbjct: 302 LPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALA 361
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
RK+V+STNIAETS+TI GI YVID G AK K +N ++ +ESL V PIS+++
Sbjct: 362 NH-------RKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSA 414
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QRSGRAGR G+C+R+YTE F+ L +T PEI R +L+ VLTLK G +D+++F
Sbjct: 415 AMQRSGRAGREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINF 473
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSN 516
+MDPP+ E L+RALE L +GALDD+G++ ++G +MS PL P +++ ++ + ++NC +
Sbjct: 474 HYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLS 533
Query: 517 EILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNS 569
E++ + + LS + F+ P+E + A EA+ +F H +GD LT LN Y ++S
Sbjct: 534 EVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESS 586
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/560 (45%), Positives = 368/560 (65%), Gaps = 36/560 (6%)
Query: 31 GPGAMMNNNNSLINRWNG-----KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVII 85
GPG ++ + +G PY+ I ++R+ LPV++ + L +++ Q ++
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAA--LSIEQQRQKLPVFKLRNHILYLIENYQTVV 74
Query: 86 LVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIG 145
+VGETG GK+TQIPQ++ E T + R ++ TQPRRVAA++V+ RVAEE +G
Sbjct: 75 IVGETGCGKSTQIPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLG 129
Query: 146 EEVGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLF 204
EVGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+
Sbjct: 130 HEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAI 189
Query: 205 GLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----------GAPLMKVPGRLHPVEIFY 254
GLLK++ K R DL+L+V SATL+A+KF+ +F ++ V GR PV+IFY
Sbjct: 190 GLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFY 249
Query: 255 TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG--- 311
Q P DY+++ + TVV+IH E GDIL FLTG+EE+E + ++ + + G
Sbjct: 250 LQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALA-RTGMKR 308
Query: 312 PVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPG 371
++V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIVYVID G
Sbjct: 309 HLRVLPMYAGLPSFEQMKVFERVSRSV-------RKVIVATNVAETSITISGIVYVIDCG 361
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
F K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T P
Sbjct: 362 FVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVP 420
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MG 490
E+ RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G
Sbjct: 421 EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG 480
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGH 550
+++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A +F
Sbjct: 481 MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIRVHRKFAV 540
Query: 551 IDGDHLTLLNVYHAYKQNSK 570
+GDHLT+LNVY A+ +++K
Sbjct: 541 EEGDHLTMLNVYEAFIKHNK 560
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/560 (45%), Positives = 368/560 (65%), Gaps = 36/560 (6%)
Query: 31 GPGAMMNNNNSLINRWNG-----KPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVII 85
GPG ++ + +G PY+ I ++R+ LPV++ + L +++ Q ++
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAA--LSIEQQRQKLPVFKLRNHILYLIENYQTVV 74
Query: 86 LVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIG 145
+VGETG GK+TQIPQ++ E T + R ++ TQPRRVAA++V+ RVAEE +G
Sbjct: 75 IVGETGCGKSTQIPQYLAEAG--WTAEGR---VVGVTQPRRVAAVTVAGRVAEERGAVLG 129
Query: 146 EEVGYSIRFEDCSSA-RTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLF 204
EVGY IRF+DC+ T +K+LTDGML+RE M DPLL +Y VI+LDEAHERTL TD+
Sbjct: 130 HEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAI 189
Query: 205 GLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY----------GAPLMKVPGRLHPVEIFY 254
GLLK++ K R DL+L+V SATL+A+KF+ +F ++ V GR PV+IFY
Sbjct: 190 GLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFY 249
Query: 255 TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG--- 311
Q P DY+++ + TVV+IH E GD+L FLTG+EE+E + ++ + + G
Sbjct: 250 LQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALA-RTGMKR 308
Query: 312 PVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPG 371
++V+P+Y+ LP Q K+FE RK++V+TN+AETS+TI GIVYVID G
Sbjct: 309 HLRVLPMYAGLPSFEQMKVFERVSRSV-------RKVIVATNVAETSITISGIVYVIDCG 361
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
F K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T P
Sbjct: 362 FVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVP 420
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MG 490
E+ RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G
Sbjct: 421 EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG 480
Query: 491 EKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGH 550
+++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A +F
Sbjct: 481 MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAV 540
Query: 551 IDGDHLTLLNVYHAYKQNSK 570
+GDHLT+LN+Y A+ +++K
Sbjct: 541 EEGDHLTMLNIYEAFIKHNK 560
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/526 (48%), Positives = 354/526 (67%), Gaps = 24/526 (4%)
Query: 53 QRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPD 112
+R I E RK LPV Q K+E LQ +K NQV+I++GETGSGKTTQ+PQ+++E +
Sbjct: 211 KRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTD--- 267
Query: 113 RRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSS-ARTVLKYLTDGM 171
+ K+ IA TQPRRVAA SV+ RVA+EM+V +G+EVGY IRFED ++ +TVLKY+TDGM
Sbjct: 268 -QGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGM 326
Query: 172 LLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 231
LLRE +TD L +Y I++DEAHERTLATD+L GLLK++L RP LKL++ SAT+ A+KF
Sbjct: 327 LLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKF 386
Query: 232 QGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SGDILVFLTGEE 290
+F P+ VPGR +PV+I YT +PE +Y+ AAI T+ QIH + GDILVFLTG+E
Sbjct: 387 SEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQE 446
Query: 291 EIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVV 350
EIE K+ + ++ +G + + + P+Y+ LP Q KIF+P P RK+V+
Sbjct: 447 EIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENC-------RKVVL 499
Query: 351 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 410
+TNIAETSLTIDGI YVIDPGF K+ Y P + LL P S+AS QR+GRAGR PG
Sbjct: 500 ATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPG 559
Query: 411 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 470
KCFR++T+ S+ ++L+ PEI R+NL+NTVL L LG+ DL+ F MD P+ TL ++
Sbjct: 560 KCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKS 619
Query: 471 LEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKY-NCSN---EILSISAML- 525
LE L LGAL+ G +T +G+ M EFP +P+ +K+L + + C E L+I +ML
Sbjct: 620 LENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLH 679
Query: 526 SVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSKI 571
P+ F+ QK D A + ++ DH+ L +++ ++ NSK
Sbjct: 680 ETPSLFI----GQK-RDAAASVLSEVESDHILYLEIFNQWR-NSKF 719
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/564 (44%), Positives = 373/564 (66%), Gaps = 30/564 (5%)
Query: 25 VKTNGVGPGAMMNNNNSLINRWNGKP------YSQRYYEILEKRKSLPVWQQKEEFLQVL 78
V +G + NNN ++ N K ++ +I ++ LPV++ + + L ++
Sbjct: 304 VLNTAMGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFRCRSQLLSLI 363
Query: 79 KANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAE 138
+ NQV++++GETGSGKTTQ+ Q++ E E R I TQPRRVAA+SV++RVA
Sbjct: 364 RENQVVVIIGETGSGKTTQLAQYLYE----EGYANDRGKSIVVTQPRRVAAISVAKRVAM 419
Query: 139 EMDVTIGEEVGYSIRFEDCSSAR-TVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
EM V +G+EVGYSIRFED + + T LK++TDG+LLRE + D L++Y +++DEAHER+
Sbjct: 420 EMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERS 479
Query: 198 LATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQE 257
L TD+L G K +L R DLKL++ SAT+ A+KF +F AP +PGR PV+ YT
Sbjct: 480 LNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSN 539
Query: 258 PERDYLEAAIRTVVQIHMCE--PSGDILVFLTGEEEIEDACRKITKEI---------TNM 306
P +DY+EAA+ V+IH+ SGDIL+F+TG+E+IE + ++ T
Sbjct: 540 PVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTAN 599
Query: 307 GDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVY 366
+++ ++++P+YS LP +Q KIF+ + RKI+++TNIAETSLTI GI Y
Sbjct: 600 FEEINDIEILPIYSALPADLQFKIFQ-------DLHGTKRKIIIATNIAETSLTIKGIRY 652
Query: 367 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 426
VID G++K KVYNP++ ++SL+++PISKA+A QRSGRAGRT PG +RLYTE +F D+
Sbjct: 653 VIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMY 712
Query: 427 PQTYPEILRSNLANTVLTLKKLGI-DDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 485
QT PEI R+NL+NT+L LK L + D+L F F+D P +T + +L L ++GA+D G
Sbjct: 713 LQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQ 772
Query: 486 LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAK 545
LT +G +M++FPL P +SK+L+ + + CS+E+L+I +MLSVP F RP+E QK AD A+
Sbjct: 773 LTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIAR 832
Query: 546 ARFGHIDGDHLTLLNVYHAYKQNS 569
+F DHLTLLNV+ ++ N+
Sbjct: 833 NKFFIAKSDHLTLLNVFEQWRANN 856
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/533 (45%), Positives = 351/533 (65%), Gaps = 32/533 (6%)
Query: 48 GKPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+P + Y E +E +R+SLP++Q + + L L+ +L+GETGSGKTTQIPQ++ EG
Sbjct: 56 AQPSASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG- 114
Query: 107 DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKY 166
R+ +IA TQPRRVAA+S++ RV++E +G+ VGY++RF+D +S T +K+
Sbjct: 115 -----GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKF 169
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVV 221
LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R + LK++V
Sbjct: 170 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIV 229
Query: 222 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSG- 280
MSAT++ + F YF GAP++ + GR HP+++FYT++P+ DYL AA+ +V QIH PS
Sbjct: 230 MSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQ 289
Query: 281 DILVFLTGEEEIE---DACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPP 337
DILVFLTG+EEIE CR I K ++ D + V+PLY++LP A Q ++F
Sbjct: 290 DILVFLTGQEEIEAMSKTCRDIAK---HLPDGCPAMLVLPLYASLPYAQQLRVF------ 340
Query: 338 SKEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
+G P G RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK
Sbjct: 341 --QGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQ 398
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGR G C+RLYTE F T PEI R NLA+ +L L + + +++ F
Sbjct: 399 AWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTF 457
Query: 457 DFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 513
DFM P+P+ + A+ L+ LGAL DD LT MG KM+ FPL+P+ +K ++ SPK++
Sbjct: 458 DFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFH 517
Query: 514 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK 566
C+ EIL+I ++LSV + P ++ + +F +GDH+TLLN+Y +K
Sbjct: 518 CTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTFK 570
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/533 (45%), Positives = 350/533 (65%), Gaps = 32/533 (6%)
Query: 48 GKPYSQRYYEILE-KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+P + Y E LE +R+SLP+++ + + L L+ +L+GETGSGKTTQIPQ++ EG
Sbjct: 47 AQPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG- 105
Query: 107 DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKY 166
R+ +IA TQPRRVAA+S++ RV++E +G+ VGY++RFED +S T +K+
Sbjct: 106 -----GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKF 160
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD-----LKLVV 221
LTDGMLLREA++D LL +Y ++LDEAHERT+ TDVLFG++K K R + LK++V
Sbjct: 161 LTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIV 220
Query: 222 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP-SG 280
MSAT++ + F YF AP++ + GR HP++IFYT++P++DYL AA+ +V QIH P S
Sbjct: 221 MSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQ 280
Query: 281 DILVFLTGEEEIE---DACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPP 337
DILVFLTG+EEIE CR I + ++ D + V+PLY++LP + Q ++F
Sbjct: 281 DILVFLTGQEEIEAMSKTCRDIAR---HLPDGCPSMLVLPLYASLPYSQQLRVF------ 331
Query: 338 SKEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
+G P G RK+++STNIAETS+TI GI YV+D G K K YNP +E L V +SK
Sbjct: 332 --QGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQ 389
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGR G C+RLYTE F + T PEI R NLA+ +L L + + +++ F
Sbjct: 390 AWQRTGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQRCNLASVILQLLAMKVPNVLTF 448
Query: 457 DFMDPPAPETLMRALEVLNYLGAL---DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYN 513
DFM P+P+ + A+ L+ LGAL DD LT +G KM+ FPL+P+ +K ++ S K++
Sbjct: 449 DFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFH 508
Query: 514 CSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYK 566
C+ EIL+I ++LSV + P + + +F +GDH+TLLN+Y +K
Sbjct: 509 CTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFK 561
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/535 (42%), Positives = 339/535 (63%), Gaps = 27/535 (5%)
Query: 47 NGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGV 106
+ PY+ I ++R LP+++ + L + + + II+VGETG GK+TQ+PQF+LE
Sbjct: 61 HNNPYAS--LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAG 118
Query: 107 DIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKY 166
D R+ I TQPRRVA ++++ RVAEE D +G +VGY++RF+D S T +K+
Sbjct: 119 --WAADGRQ---IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKF 173
Query: 167 LTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 226
+TDG+LLRE + DPLL +Y +I++DEAHER+ TD+L GLL+++++ R DL+++V SATL
Sbjct: 174 MTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATL 233
Query: 227 EAEKFQGYFY----------GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
+AE F+ +F A ++ V GR HPV + +T+ DY ++A+ TV+ IH
Sbjct: 234 DAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKH 293
Query: 277 EPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPP 336
E GDILVFLTG++E+ED C K+ +E+ + VVP Y LP Q K F+ P
Sbjct: 294 ENPGDILVFLTGQDEVEDVCEKL-RELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPH 352
Query: 337 PSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 396
+ RK+VV+TNIAE S+TI GI YVID G+ K + + VE+L+ +SKAS
Sbjct: 353 GT-------RKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKAS 405
Query: 397 AHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
A QR+GRAGR +PGKC+RLY E F T PEI R +A+T+L LK LG+ ++ F
Sbjct: 406 AEQRAGRAGRIRPGKCYRLYPESEFER-FAEGTVPEIQRCQMASTILQLKALGVQNVHRF 464
Query: 457 DFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCS 515
++ PP ++ LE+L LGA+D+ LT +G +M+EFPL P SK L++S ++ CS
Sbjct: 465 HYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCS 524
Query: 516 NEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
E+++I AM+ + + F+ P + AD + +F +GDH+T+LNV+ + +N +
Sbjct: 525 TEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGR 579
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/525 (42%), Positives = 340/525 (64%), Gaps = 9/525 (1%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQV+++ G++ GK++Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ + A+ ++ RVA+EMDV IG EVGY I FE+C + T
Sbjct: 100 AEYC---LSIHYQHGGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER+LATDVL GLLK+VL RP+LKL+V
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
+ L K Y+ P+++V + HPVE+ Y ++D E+ IR + +IH GD+
Sbjct: 217 CSPLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDV 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 342
+VFL E++IE + +E +N+ VG + V+PLY P + +F P K
Sbjct: 276 VVFLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY----PKEKCSLFRPVDETEKRCQ 331
Query: 343 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++T+ E+ + + +VID G +++VYNPR+R SL++ PIS++ A R
Sbjct: 332 VYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQ 391
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LYTE+ + D++P E+ +NL + VL +K++ I L DFM+ P
Sbjct: 392 LLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRP 451
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 452 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIA 511
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYK 566
AM++ P+CF+ P A++AA F H +GDH TL+NVY+AY+
Sbjct: 512 AMVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNAYQ 556
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/580 (41%), Positives = 362/580 (62%), Gaps = 34/580 (5%)
Query: 3 TERKRKV--SLFDVVDETSV--SAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQ---RY 55
T +K+KV ++ + T + ++K+VK N G G +++ S N+ N Y R
Sbjct: 14 TSKKQKVRRNIHPFTNNTRIKRASKIVKFNDSGEGDHVSDQRS--NKENVLTYKSLKSRA 71
Query: 56 YEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRR 115
++L+ R++LPV+Q K E + +++N V +L+GETGSGK+TQIPQFVLE + D ++
Sbjct: 72 SDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKL----YDTKK 127
Query: 116 KMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLRE 175
IA TQPRRVAA++++ RVA+E +GE+VGYS+RF++ ++ RT LKYLTDGMLLRE
Sbjct: 128 HGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRE 187
Query: 176 AMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKN-RPDLKLVVMSATLEAEKFQGY 234
M + L Y VIV+DEAHERT+ TD++ G LK +++ RPDL+++VMSATL+AEKF +
Sbjct: 188 LMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEF 247
Query: 235 FYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIED 294
F AP++ V GR V+ +Y + P D ++A IR +QI+ E GDIL FL G+EEI+
Sbjct: 248 FNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDK 307
Query: 295 ACRKITKEITNMGDQVGPVKVV---PLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVS 351
A + K + D+ PV ++ PLY+ LP Q +F P RK+V S
Sbjct: 308 AVTIMEKIAKYVSDE-APVPLIVPYPLYAALPAVQQSLVFAPIKGFK-------RKVVFS 359
Query: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGK 411
TNIAETS+TI G+ +V+D G K KV+ ++ + +LL PIS+ASA QRSGRAGR GK
Sbjct: 360 TNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGK 419
Query: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRAL 471
FRLY E + L Q+ PEI RS++ + VL LK+ G+DDL+++ + + P E ++ L
Sbjct: 420 SFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGL 478
Query: 472 EVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
+ L LGALD G +T+ G++M+ PL P +S +L+++ + C ++++ I + LSV N
Sbjct: 479 QELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLL 538
Query: 532 VRPREAQKAADEAKAR------FGHIDGDHLTLLNVYHAY 565
+ P ++ DE R G GD + L ++ Y
Sbjct: 539 LNPSPEER--DEVNERRLSLCNAGKRYGDLIMLKELFDIY 576
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/528 (41%), Positives = 338/528 (64%), Gaps = 10/528 (1%)
Query: 43 INRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFV 102
+N ++G PYS RYY++L++R+ LP+W++K F++ L NQ++I+ G+ GK+ Q+PQ+
Sbjct: 40 LNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWC 99
Query: 103 LEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSART 162
E + + CTQ + + ++ RVA+EMDV IG EVGY I FE+C + T
Sbjct: 100 AEYC---LSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNET 156
Query: 163 VLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVM 222
+L+Y TD ML RE M++P L Y VI+LD+ HER++ATDVL GLLK+VL RP+LKL++
Sbjct: 157 ILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIIN 216
Query: 223 SATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
S+ K Y+ P+++V + HPVE+ Y E ++D E+ +R + +IH GDI
Sbjct: 217 SSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDI 275
Query: 283 LVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGG 342
+VFL E++IE C + + +N+ +G + VVPLY P + +F+P K
Sbjct: 276 VVFLACEQDIEKVCETVYQG-SNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQ 330
Query: 343 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 402
R++V++T+ E + + + +VID G ++KVYNPR+R SL++ PIS++ A R
Sbjct: 331 VYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQ 390
Query: 403 RAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 462
G + GK F LYTE+ + D+ P E+ +NL + VL +K++ I L H DFM+ P
Sbjct: 391 ILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRP 450
Query: 463 APETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSIS 522
APE+LM+ALE L+YL ALD+DGNL+E G MSEFPLDPQ+SK ++ S +++C +E+L+I+
Sbjct: 451 APESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIA 510
Query: 523 AMLSVPNCFVR-PREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNS 569
AM++ PNCF P A++AA F H +GDH TL+++Y AY+ +
Sbjct: 511 AMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTT 558
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 342/555 (61%), Gaps = 13/555 (2%)
Query: 14 VVDETSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEE 73
+ DE S + ++ V + N+ +N ++G PYS R+Y++L++R++LP+W+ K +
Sbjct: 16 ISDEKSCCLDVTDSSDVEGDEL---NDLELNPFDGLPYSSRFYKLLKERETLPIWKIKYD 72
Query: 74 FLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVS 133
FL+ L NQ++++ SGK++QIPQ+ E + + CTQ + A+ ++
Sbjct: 73 FLEHLAHNQIVVVSAGPKSGKSSQIPQWCAEYC---LAGHYQHGAVVCTQAHKQTAVWLA 129
Query: 134 RRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEA 193
RVA+EMDV IG EVGY + FE+C ++ T+L+Y TD ML RE M++PLL Y V+++D+
Sbjct: 130 MRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNPLLSSYGVVIIDDV 189
Query: 194 HERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIF 253
+ER ++TDVL LK + +RP+LK+V+++ + Y+ APL++ H VE
Sbjct: 190 YERFVSTDVLLSFLKVIAVSRPELKVVIITCPSLSGTLVSYYGNAPLVEAENT-HSVESV 248
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVGPV 313
YT RDY +A+R + +IH + GDI+VFL EEEI+ A I +E +M ++G +
Sbjct: 249 YTTSLPRDYFHSALRLLFEIHHTKEKGDIVVFLACEEEIKRAYEHIKQEALHMNPELGEL 308
Query: 314 KVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFA 373
+ LY P + P P RK+V++T++ E+ + + I +VID G
Sbjct: 309 MPIALY----PHQSISDYIPYEELDDNSKNPKRKVVLTTSLGESLIWMKNIFFVIDVGIE 364
Query: 374 KQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEI 433
K+KVYN R+R ESL+ PISK A R + GK F LY E F ++++P ++
Sbjct: 365 KRKVYNTRIRAESLVTQPISKVRAKMRKHILSSSSEGKLFCLYPE-DFAHEMKPFLTAKV 423
Query: 434 LRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKM 493
NL + VL LK++ I L H DF++ P PE+LM+ALE L+YL ALD+DGNL+E G M
Sbjct: 424 EECNLISMVLFLKRMDIAGLAHCDFINRPDPESLMQALEDLDYLAALDNDGNLSEFGIIM 483
Query: 494 SEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVR-PREAQKAADEAKARFGHID 552
SEFPLDPQ+SK ++ + +++C +E+L+++AM++ PNCF+ P EA++ K +F H +
Sbjct: 484 SEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELDLIGKGKFFHPE 543
Query: 553 GDHLTLLNVYHAYKQ 567
GDH TL+N+Y+ Y+Q
Sbjct: 544 GDHFTLINIYNEYEQ 558
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/529 (41%), Positives = 329/529 (62%), Gaps = 38/529 (7%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLN 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-----DLKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ +++ LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR-------KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++ + +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
SV N F+RP +EA++ E A+ G + D TL ++ K +
Sbjct: 519 SVENVFIRPVDPEYQKEAEQKHRELAAKAGGFN-DFATLAVIFEQCKSS 566
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/529 (42%), Positives = 331/529 (62%), Gaps = 38/529 (7%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR-------KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
SV N F+RP +EA++ E A+ G + D TL ++ K +
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSS 566
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/529 (42%), Positives = 331/529 (62%), Gaps = 38/529 (7%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLT 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLK----NRPD-LKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ + NR + LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR-------KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
SV N F+RP +EA++ E A+ G + D TL ++ K +
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSS 566
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/529 (41%), Positives = 330/529 (62%), Gaps = 38/529 (7%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+ P+ +Q+++ +Q ++ N +I+ G TGSGKTTQ+P+++ E + MI TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEA------GFSQHGMIGVTQ 105
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PR+VAA+SV++RVAEEM T+G +VGY +RF+DCSS T +KY+TDG LL+ + DP L
Sbjct: 106 PRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLS 165
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRP-----DLKLVVMSATLEAEKFQGYFYGA 238
++ VI+LDEAHERTL TD+LFGLLK++ +++ LK+VVMSAT+E K +F
Sbjct: 166 KFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNC 225
Query: 239 PLMKVPGRLHPV-EIFYTQEPERD-----YLEAAIRTVVQIHMCEPSGDILVFLTGEEEI 292
P+ +PGRL+PV E F RD Y++A ++ + IH+ E +GDILVFLTG+ EI
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 293 EDACR-------KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPG 345
E +C + + + + ++P Y ++ Q++IF P PP
Sbjct: 286 EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGI------- 338
Query: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAG 405
RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAG
Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAG 398
Query: 406 RTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
RT GKCFR+Y+++ ++ + PEI R++L + VLTLK L I D++ F ++DPP
Sbjct: 399 RTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 466 TLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML 525
++ AL+ L A+D G++T +G M EFPL P ++ ++ + +C + +L I+AML
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAML 518
Query: 526 SVPNCFVRP------REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQN 568
SV N F+RP +EA++ E A+ G + D TL ++ K +
Sbjct: 519 SVENVFIRPVDPEYQKEAEQRHRELAAKAGGFN-DFATLAVIFEQCKSS 566
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 327/514 (63%), Gaps = 17/514 (3%)
Query: 61 KRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIA 120
++K LP+ + + + L ++ NQ+ I++G TG GKTTQIPQF+ E + +I
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEA-----GWASQNGIIG 75
Query: 121 CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDP 180
CTQPRR+ A SVS RV+ E++ G GYSI+F+ S +T +KY+TDG+LL E DP
Sbjct: 76 CTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDP 135
Query: 181 LLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
LLERY +++LDE HERTL+TD+L G+LK +L+ R D +LV+ SA+++A K +F +
Sbjct: 136 LLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKV 195
Query: 241 --MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRK 298
M + G+L PVE + Q+P +Y+++AI TV+ I+ P GDILVFL+G +EIE +K
Sbjct: 196 CTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKK 255
Query: 299 ITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETS 358
I + + + + +PL++ L Q ++F +G RK++ STNIAETS
Sbjct: 256 IEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIY-----DGD--FRKVIFSTNIAETS 308
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
+TIDGIVYV+D GF KQ++YNP R L+ PISK+SA QRSGRAGRT GK FRLYTE
Sbjct: 309 ITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTE 368
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
K++ + ++ + +IL +++ VL LK LG+ +++ F F P LM ALE L LG
Sbjct: 369 KAY-SLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLG 427
Query: 479 ALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREA 537
LD+ GNLT+ +G ++S LD +SK L+ S ++ C++EILSI+++L+ F P +
Sbjct: 428 VLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSS 487
Query: 538 QKA-ADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
K A A + F +GD +T LNV+ ++ N K
Sbjct: 488 SKNDAFVAHSSFFANEGDIITALNVFESFVGNKK 521
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/519 (40%), Positives = 322/519 (62%), Gaps = 36/519 (6%)
Query: 64 SLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQ 123
+LPV Q+K++ L+ ++ +QV+I+ GETGSGKTTQ+P+ +E R K +I TQ
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME------LGRGIKGLIGHTQ 129
Query: 124 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 183
PRR+AA +V+ R+AEE+ G +GY +RF D S T++K +TDG+LL E D LL
Sbjct: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189
Query: 184 RYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKV 243
+Y I++DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F AP+++V
Sbjct: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249
Query: 244 PGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
GR +PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI D
Sbjct: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTAD 308
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ K N+ +++PLY+ L + Q ++F+ GR+IV++TN+AET
Sbjct: 309 ALNK--LNLRH----TEILPLYARLSNSEQNRVFQ---------SHSGRRIVLATNVAET 353
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+
Sbjct: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413
Query: 418 EKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
E F + +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L
Sbjct: 414 EDDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471
Query: 477 LGALDDDGN-----LTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCF 531
LGA+ D LT +G ++S+ P+DP++++M++E+ K+ C E + I++ LS+ +
Sbjct: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531
Query: 532 VRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
RP + Q+A+DE RF + D L +N+++ + K
Sbjct: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQK 570
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 319/521 (61%), Gaps = 38/521 (7%)
Query: 63 KSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLE-GVDIETPDRRRKMMIAC 121
+SLPV Q+K E +++ +QVI++ GETGSGKTTQ+P+ LE G MI
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFG-------NLGMIGH 133
Query: 122 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 181
TQPRR+AA SV+ R+AEE++ +G VGY +RF D S T +K +TDG+LL E D
Sbjct: 134 TQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRF 193
Query: 182 LERYKVIVLDEAHERTLATDVLFGLLKEVL-KNRPDLKLVVMSATLEAEKFQGYFYGAPL 240
L +Y +++DEAHER+L D + G LK++L + R DLKL++ SAT++ E+F +F AP+
Sbjct: 194 LNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPI 253
Query: 241 MKVPGRLHPVEIFY---TQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACR 297
++V GR +PVE+ Y +E ++D L+ + V ++ E GDIL+F+ GE EI D
Sbjct: 254 IEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQ-AEGRGDILIFMNGEREIRDTAE 312
Query: 298 KITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAET 357
+ K+ + +++PL++ L Q KIF P+ +IV++TN+AET
Sbjct: 313 ALQKQ------NLKHTEILPLFARLSAQEQNKIFHPSGL---------NRIVLATNVAET 357
Query: 358 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 417
SLT+ I YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+
Sbjct: 358 SLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 417
Query: 418 EKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476
E+ FN+ +P+ T PEILR+NLA+ +L + LG+DD+ F F+D P + +++L
Sbjct: 418 EEDFNS--RPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEE 475
Query: 477 LGALD-------DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPN 529
LGA + + LT +G ++++ P+DP+++KM++ + + C E++ I + LS+ +
Sbjct: 476 LGAFETVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQD 535
Query: 530 CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSK 570
RP+E Q+A+DE RF D L LN++ ++ K
Sbjct: 536 PRERPQEKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQK 576
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A10.06c PE=3 SV=1
Length = 1183
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/554 (37%), Positives = 313/554 (56%), Gaps = 67/554 (12%)
Query: 57 EILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDRRRK 116
EI E R +LP+ +++ ++ + AN V+I+ G TGSGKTTQ+PQF+ E +P+
Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEA-GFSSPESENP 448
Query: 117 MMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 176
MIA TQPRRVAA+S+++RV+EE+ +V Y IRF+ + T +K++TDG+LLRE
Sbjct: 449 GMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLREL 507
Query: 177 MTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPD----------LKLVVMSATL 226
+D LL Y +++DEAHER++ TD+L GLL +++ R + LKL++MSATL
Sbjct: 508 SSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATL 567
Query: 227 EAEKFQG----YFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPSGDI 282
F + P++K+ R +PV I + + + DYL+ A V IH P+G I
Sbjct: 568 RVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSI 627
Query: 283 LVFLTGEEEIEDACRKITKEI--------------------------------------- 303
LVFLTG++E+E C+ + K
Sbjct: 628 LVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPT 687
Query: 304 -----TNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETS 358
D+ P+ V+PLYS L Q K+F+ +P EG R +V+TN+AETS
Sbjct: 688 SSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSP----EG---HRMCIVATNVAETS 740
Query: 359 LTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTE 418
+TI I YV+D G AK++VYN + V+ V ISKA+A QR+GRAGRT PG C+RLY+
Sbjct: 741 ITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSS 800
Query: 419 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 478
F++ + PEILR+ + + VL +K + ID++ +F F P L ++L++L+ LG
Sbjct: 801 AVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLG 860
Query: 479 ALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQ 538
A+D +G LT++GE+MS FPL P+ SKML+ ++ C ++++ + LS+ FV +
Sbjct: 861 AIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLL 920
Query: 539 KAADEAKARFGHID 552
A + +R D
Sbjct: 921 YDAHDKNSRSEETD 934
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 335/558 (60%), Gaps = 28/558 (5%)
Query: 20 VSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQVLK 79
+++ L + + + PG + +N ++G P+S YYE+LE+R++LP+W + FL+ L+
Sbjct: 1 MASGLAEESELSPG----ESELAVNPFDGLPFSSCYYELLEQRRALPIWAARFLFLEHLE 56
Query: 80 ANQ--VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRRVA 137
++ V+++ G+ GSGK+TQIPQ+ E + + TQP +AAMS++ RVA
Sbjct: 57 SSPTGVVLVSGDPGSGKSTQIPQWCAE---FALARGFQTGQVTVTQPYPLAAMSLASRVA 113
Query: 138 EEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHERT 197
+EMD+T+G E+GYSI EDC+ T+L++ D + L+E + + V++LDEA ER+
Sbjct: 114 DEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERS 173
Query: 198 LATDVLFGLLKEV-LKNRP-DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRL--HPVEIF 253
+A+D+L GLL++ L+N P D ++VV++ KFQ ++ +P+++VP P +
Sbjct: 174 VASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGNSPIVRVPREPGGDPT-LA 232
Query: 254 YTQEPERDYLEAAIRTVVQIHMCEPS-GDILVFLTGEEEIEDACRKITKEITNMGDQVGP 312
Y D +EAA + V+++ E + GD+LV+L EEEI C ++ E+ + P
Sbjct: 233 YKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPP 292
Query: 313 VKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGF 372
+V+PL+ A+Q ++E + RKIVV+ +A+ S ++ I +VID G
Sbjct: 293 PRVLPLHPGCAQAIQ-TVYE-------DTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGL 344
Query: 373 AKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPE 432
+ VYNPR+R ES ++ PISK A R RA PG C RLY++ + + P +P+
Sbjct: 345 ELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPK 404
Query: 433 ILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEK 492
+ NL++ VL L + I + F+D PAPE LMRALE L+YL AL+DDG L+++G
Sbjct: 405 VCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGELSDLGVI 464
Query: 493 MSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKAR--FGH 550
+SEFPL P+++K L+ S ++NC +E+L+++AML+ F RP +A EA R H
Sbjct: 465 LSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRP---PLSAGEAALRRALEH 521
Query: 551 IDGDHLTLLNVYHAYKQN 568
DGDH +L+ VY A+ Q+
Sbjct: 522 ADGDHSSLIQVYEAFVQS 539
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 204/526 (38%), Positives = 301/526 (57%), Gaps = 34/526 (6%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAA-------- 202
Query: 114 RRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQPRR+A +S+++RV E G +VGY IRFE SA T + +LT G+LL
Sbjct: 203 -GFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 261
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 262 RQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSS 321
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPE-----------RDYLEAAIRTVVQIHMCEPSGD 281
YF AP+++VPGRL P+ + Y QE E R +L + ++ + E GD
Sbjct: 322 YFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR-VLESIDHKYPPEERGD 380
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
+LVFL+G EI ++ V V+PL+S L A Q K+F+ APP
Sbjct: 381 LLVFLSGMAEISAVLEAAQTYASHTQRWV----VLPLHSALSVADQDKVFDVAPPGV--- 433
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR
Sbjct: 434 ----RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRK 489
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT PG CFRLY E ++ P PEI R L + VL +K + + D F F++P
Sbjct: 490 GRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEP 548
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
P P +L A+ L GALD LT +G +++ P+D + KML+ ++ +L+I
Sbjct: 549 PPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTI 608
Query: 522 SAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ 567
+A LSV + F R ++ A+ GD TL NV++A+ Q
Sbjct: 609 AAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQ 654
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/528 (38%), Positives = 300/528 (56%), Gaps = 38/528 (7%)
Query: 54 RYYEILEKRKSLPVWQQKEEFLQVLKANQVIILVGETGSGKTTQIPQFVLEGVDIETPDR 113
R ++ +R +LP+ Q LQ LK +QV+++ G+TG GK+TQ+PQ++L
Sbjct: 153 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAG------- 205
Query: 114 RRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLL 173
+ACTQPRR+A +S+++RV E G +VGY IRFE SA T + +LT G+LL
Sbjct: 206 --FSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 263
Query: 174 REAMTDPLLERYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQG 233
R+ +P L +Y+V+++DE HER L D L G+L+ +L RPDLK+++MSAT+ F
Sbjct: 264 RQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSS 323
Query: 234 YFYGAPLMKVPGRLHPVEIFYT-QEPE-----------RDYLEAAIRTVVQIHMCEPSGD 281
YF AP+++VPGRL P+ + Y QE + R +L + + + E GD
Sbjct: 324 YFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLR-VLEAIDNKYPPEERGD 382
Query: 282 ILVFLTGEEEIEDACRKITKEITNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPSKEG 341
+LVFL+G EI + V V+PL+S L + Q K+F+ AP
Sbjct: 383 LLVFLSGMAEITTVLDAAQAYASLTQRWV----VLPLHSALSVSDQDKVFDVAPAGV--- 435
Query: 342 GPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRS 401
RK ++STNIAETS+TIDGI +V+D G K+ Y+P+ +++ L IS+ASA QR
Sbjct: 436 ----RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRK 491
Query: 402 GRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDP 461
GRAGRT PG C+RLY E ++ P PEI R L VL +K + + D F F++P
Sbjct: 492 GRAGRTGPGVCYRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEP 550
Query: 462 PAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSI 521
P P ++ A+ L GALD LT +G +++ P+D + KML+ ++ + +L+I
Sbjct: 551 PPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTI 610
Query: 522 SAMLSVPNCFVRPREAQKAADEAKAR--FGHIDGDHLTLLNVYHAYKQ 567
+A LSV + F R AQ D A AR GD TL NV++A+ Q
Sbjct: 611 AAALSVQSPFT--RSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQ 656
>sp|Q8TE96|DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2
Length = 717
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 332/559 (59%), Gaps = 29/559 (5%)
Query: 18 TSVSAKLVKTNGVGPGAMMNNNNSLINRWNGKPYSQRYYEILEKRKSLPVWQQKEEFLQV 77
TS +L + G PG + +N ++G P+S RYYE+L++R++LP+W + FL+
Sbjct: 2 TSQPLRLAEEYGPSPG----ESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQ 57
Query: 78 LKANQ--VIILVGETGSGKTTQIPQFVLEGVDIETPDRRRKMMIACTQPRRVAAMSVSRR 135
L++N V+++ GE GSGK+TQIPQ+ E +K + TQP +AA S++ R
Sbjct: 58 LESNPTGVVLVSGEPGSGKSTQIPQWCAE---FALARGFQKGQVTVTQPYPLAARSLALR 114
Query: 136 VAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIVLDEAHE 195
VA+EMD+T+G EVGYSI EDC+ T+L++ D +LL+E + + V+VLDEA E
Sbjct: 115 VADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQE 174
Query: 196 RTLATDVLFGLLKEV-LKNRP-DLKLVVMSATLEAEKFQGYFYGAPLMKVPGRL--HPVE 251
R++A+D L GLL++ L+ P DL++VV++ K + ++ P++ +P P
Sbjct: 175 RSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSP 234
Query: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEITNMGDQVG 311
I++ P D +EAA + V+++ E GD+LVFL EEEI C +++E+ ++ Q
Sbjct: 235 IYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGL 293
Query: 312 PVKVVPLYSTLPPAMQQKIFEPAPPPSKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPG 371
P +V+PL+ A+Q ++E RK+VV+ +A+ S ++ I +VID G
Sbjct: 294 PPRVLPLHPDCGRAVQ-AVYEDMD---------ARKVVVTHWLADFSFSLPSIQHVIDSG 343
Query: 372 FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYP 431
+ VYNPR+R E ++ PISK A R RA PG C LY + + P P
Sbjct: 344 LELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQP 403
Query: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGE 491
+ NL++ VL LK+ I + F+D PAPE LM+ALE L+YL ALDDDG+L+++G
Sbjct: 404 RVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGV 463
Query: 492 KMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKAR--FG 549
+SEFPL P+++K L+ S +++C +E+L+++AML+ F RP +A+EA R
Sbjct: 464 ILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRP---PLSAEEAALRRALE 520
Query: 550 HIDGDHLTLLNVYHAYKQN 568
H DGDH +L+ VY A+ Q+
Sbjct: 521 HTDGDHSSLIQVYEAFIQS 539
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,798,356
Number of Sequences: 539616
Number of extensions: 9150645
Number of successful extensions: 37403
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 36638
Number of HSP's gapped (non-prelim): 356
length of query: 573
length of database: 191,569,459
effective HSP length: 123
effective length of query: 450
effective length of database: 125,196,691
effective search space: 56338510950
effective search space used: 56338510950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)