Query 008224
Match_columns 573
No_of_seqs 391 out of 1642
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 21:04:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008224.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008224hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 7E-118 2E-122 940.4 32.3 450 109-562 41-500 (571)
2 COG1621 SacC Beta-fructosidase 100.0 4.7E-84 1E-88 698.2 38.0 331 116-477 27-371 (486)
3 smart00640 Glyco_32 Glycosyl h 100.0 4E-80 8.8E-85 669.6 43.2 382 122-549 1-396 (437)
4 TIGR01322 scrB_fam sucrose-6-p 100.0 4.8E-79 1E-83 662.6 40.1 366 116-550 12-398 (445)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 3.7E-79 8E-84 633.9 26.6 299 122-440 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 1.6E-68 3.5E-73 548.3 32.8 286 128-443 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 1E-54 2.3E-59 442.7 30.5 266 131-433 1-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 2E-38 4.4E-43 318.7 26.8 242 132-405 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 2.9E-36 6.3E-41 302.7 27.4 269 131-427 1-286 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 1.7E-25 3.7E-30 235.6 24.8 193 131-342 8-255 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 1E-21 2.3E-26 201.3 19.5 189 121-318 4-282 (291)
12 cd08984 GH43_5 Glycosyl hydrol 99.8 2.8E-19 6.1E-24 184.5 21.0 179 113-318 58-246 (294)
13 cd08993 GH43_DUF377 Glycosyl h 99.8 7.3E-19 1.6E-23 178.7 20.2 160 132-313 2-169 (268)
14 cd09004 GH43_bXyl Glycosyl hyd 99.8 9.9E-19 2.2E-23 178.1 19.7 192 127-353 5-197 (275)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.7 2.3E-16 5.1E-21 160.8 21.3 206 128-364 6-224 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 2.9E-15 6.3E-20 152.8 19.7 195 132-353 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.6 3.3E-14 7.1E-19 142.5 20.3 202 132-364 2-214 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.6 1.8E-13 3.9E-18 140.5 20.6 180 132-344 2-204 (294)
19 cd08998 GH43_ABN_1 Glycosyl hy 99.5 8.5E-13 1.8E-17 135.6 20.2 179 130-343 1-192 (288)
20 cd08992 GH43_like_1 Glycosyl h 99.5 5.4E-13 1.2E-17 141.1 17.7 171 118-296 24-241 (349)
21 PF11837 DUF3357: Domain of un 99.5 4.6E-15 9.9E-20 132.1 -0.7 97 14-114 7-106 (106)
22 cd08984 GH43_5 Glycosyl hydrol 99.5 3.2E-12 6.9E-17 132.1 19.4 169 130-318 11-193 (294)
23 cd08985 GH43_6 Glycosyl hydrol 99.4 9.1E-11 2E-15 119.9 24.6 197 132-364 5-211 (265)
24 cd08979 GH_J Glycosyl hydrolas 99.3 4.5E-11 9.9E-16 120.3 17.1 155 110-275 40-209 (276)
25 PF04616 Glyco_hydro_43: Glyco 99.3 3E-10 6.4E-15 115.5 21.1 183 128-344 8-200 (286)
26 cd09000 GH43_XYL_1 Glycosyl hy 99.3 4.2E-10 9E-15 115.8 20.2 178 128-343 6-196 (288)
27 cd09003 GH43_AXH_1 Glycosyl hy 99.2 8.4E-10 1.8E-14 115.5 21.3 186 128-343 7-215 (311)
28 cd08983 GH43_4 Glycosyl hydrol 99.2 9.8E-10 2.1E-14 113.1 21.2 182 128-343 16-207 (276)
29 PF04041 DUF377: Domain of unk 99.2 9.2E-11 2E-15 123.0 12.5 160 135-311 36-201 (312)
30 cd08981 GH43_2 Glycosyl hydrol 99.1 6.4E-09 1.4E-13 107.9 19.9 135 128-274 4-142 (291)
31 cd08992 GH43_like_1 Glycosyl h 99.1 4.5E-09 9.7E-14 111.6 18.6 186 112-316 88-308 (349)
32 cd08988 GH43_ABN Glycosyl hydr 99.0 2.1E-08 4.6E-13 103.1 19.5 180 131-343 1-193 (279)
33 cd08989 GH43_XYL Glycosyl hydr 98.9 1.3E-07 2.7E-12 97.0 19.5 125 128-274 6-136 (269)
34 cd08980 GH43_1 Glycosyl hydrol 98.8 2.5E-07 5.4E-12 95.2 19.0 188 132-354 2-205 (288)
35 cd09001 GH43_XYL_2 Glycosyl hy 98.8 3.5E-07 7.6E-12 93.7 19.2 169 128-343 9-191 (269)
36 PF02435 Glyco_hydro_68: Levan 98.8 5.1E-07 1.1E-11 97.6 21.0 192 131-342 63-318 (428)
37 cd08993 GH43_DUF377 Glycosyl h 98.8 3.5E-08 7.6E-13 100.5 11.5 98 194-300 4-105 (268)
38 cd08986 GH43_7 Glycosyl hydrol 98.8 3.5E-07 7.6E-12 93.7 17.7 130 129-274 1-150 (269)
39 cd08994 GH43_like_2 Glycosyl h 98.6 2.7E-07 5.9E-12 94.9 12.3 108 131-243 81-198 (291)
40 cd09002 GH43_XYL_3 Glycosyl hy 98.6 4.1E-07 8.9E-12 93.9 13.5 122 128-274 13-134 (280)
41 cd08982 GH43_3 Glycosyl hydrol 98.6 2.5E-06 5.5E-11 88.8 18.5 109 130-275 3-111 (295)
42 cd08987 GH62 Glycosyl hydrolas 98.6 4.2E-06 9.1E-11 86.6 18.4 208 116-365 7-230 (303)
43 cd08995 GH32_Aec43_like Glycos 98.5 2.2E-06 4.8E-11 87.6 15.0 151 111-275 38-200 (280)
44 COG2152 Predicted glycosylase 98.5 1.6E-06 3.5E-11 89.6 12.6 147 135-301 35-193 (314)
45 cd08978 GH_F Glycosyl hydrolas 98.5 5E-06 1.1E-10 83.3 15.9 156 127-296 56-215 (271)
46 cd08999 GH43_ABN_2 Glycosyl hy 98.4 6.4E-06 1.4E-10 84.2 15.6 153 131-297 63-226 (287)
47 cd08983 GH43_4 Glycosyl hydrol 98.4 2.5E-06 5.5E-11 87.9 11.7 90 238-343 4-99 (276)
48 cd08986 GH43_7 Glycosyl hydrol 98.3 6.1E-06 1.3E-10 84.6 12.8 120 254-399 2-147 (269)
49 cd08772 GH43_62_32_68 Glycosyl 98.3 1.8E-05 3.8E-10 79.6 15.8 157 128-296 58-224 (286)
50 cd08991 GH43_bXyl_2 Glycosyl h 98.2 3.5E-05 7.5E-10 79.3 16.6 154 129-296 54-227 (294)
51 cd08990 GH43_AXH_like Glycosyl 98.2 3.9E-05 8.5E-10 78.4 15.7 151 128-299 62-219 (274)
52 PF04041 DUF377: Domain of unk 98.1 9E-06 1.9E-10 85.6 9.6 108 186-301 28-137 (312)
53 cd08998 GH43_ABN_1 Glycosyl hy 98.1 0.00014 3E-09 74.9 17.4 152 129-294 57-217 (288)
54 cd08996 GH32_B_Fructosidase Gl 98.1 4.2E-05 9E-10 78.9 12.6 152 110-275 39-201 (298)
55 cd08989 GH43_XYL Glycosyl hydr 97.9 0.00016 3.4E-09 74.2 13.5 78 240-343 1-87 (269)
56 cd08981 GH43_2 Glycosyl hydrol 97.9 0.00015 3.2E-09 75.5 13.3 78 252-344 4-88 (291)
57 cd09002 GH43_XYL_3 Glycosyl hy 97.9 0.00019 4.1E-09 74.1 13.8 78 239-343 7-84 (280)
58 TIGR01322 scrB_fam sucrose-6-p 97.7 0.0005 1.1E-08 75.7 14.0 153 112-275 64-225 (445)
59 cd08997 GH68 Glycosyl hydrolas 97.7 0.00095 2.1E-08 71.4 15.2 148 139-295 80-284 (349)
60 PF04616 Glyco_hydro_43: Glyco 97.7 0.00061 1.3E-08 69.3 13.2 142 127-275 116-260 (286)
61 cd08988 GH43_ABN Glycosyl hydr 97.5 0.0041 8.8E-08 64.1 17.1 144 131-291 58-214 (279)
62 cd08980 GH43_1 Glycosyl hydrol 97.5 0.0026 5.6E-08 65.6 15.4 146 125-274 108-259 (288)
63 smart00640 Glyco_32 Glycosyl h 97.5 0.00096 2.1E-08 73.3 12.6 154 111-275 46-215 (437)
64 cd09004 GH43_bXyl Glycosyl hyd 97.3 0.0053 1.1E-07 62.8 14.8 138 132-297 68-212 (275)
65 COG2152 Predicted glycosylase 97.3 0.00078 1.7E-08 70.1 8.6 115 179-302 14-141 (314)
66 cd08985 GH43_6 Glycosyl hydrol 97.3 0.0094 2E-07 61.2 16.3 146 130-299 65-215 (265)
67 cd00260 Sialidase Sialidases o 97.3 0.0076 1.6E-07 63.5 15.9 167 115-298 59-240 (351)
68 cd09001 GH43_XYL_2 Glycosyl hy 97.2 0.0089 1.9E-07 61.4 15.0 131 132-295 78-212 (269)
69 cd09000 GH43_XYL_1 Glycosyl hy 97.0 0.021 4.6E-07 58.8 15.9 143 131-296 69-219 (288)
70 cd09003 GH43_AXH_1 Glycosyl hy 97.0 0.025 5.3E-07 59.5 16.4 147 132-300 80-248 (311)
71 PF13088 BNR_2: BNR repeat-lik 96.9 0.0094 2E-07 60.2 11.8 149 130-297 48-200 (275)
72 COG3507 XynB Beta-xylosidase [ 96.9 0.0034 7.3E-08 70.0 9.1 100 162-275 56-165 (549)
73 PF03664 Glyco_hydro_62: Glyco 96.6 0.22 4.7E-06 50.8 18.4 206 122-365 15-229 (271)
74 cd08982 GH43_3 Glycosyl hydrol 96.5 0.031 6.8E-07 58.4 12.7 134 127-272 88-237 (295)
75 PF13088 BNR_2: BNR repeat-lik 96.2 0.12 2.5E-06 52.3 14.2 146 141-299 1-153 (275)
76 cd08987 GH62 Glycosyl hydrolas 95.9 0.21 4.5E-06 52.4 14.6 142 132-296 80-230 (303)
77 PF00251 Glyco_hydro_32N: Glyc 95.2 0.25 5.4E-06 51.7 12.7 117 110-237 45-170 (308)
78 PF08244 Glyco_hydro_32C: Glyc 92.5 0.12 2.7E-06 43.7 3.3 36 508-549 9-44 (86)
79 PF13859 BNR_3: BNR repeat-lik 91.3 0.83 1.8E-05 48.4 8.6 88 193-298 124-214 (310)
80 cd00260 Sialidase Sialidases o 91.0 10 0.00022 39.8 16.6 148 158-318 45-207 (351)
81 COG3940 Predicted beta-xylosid 89.4 2.5 5.4E-05 42.6 9.5 103 136-245 137-248 (324)
82 PF13810 DUF4185: Domain of un 83.7 22 0.00047 37.9 13.6 160 129-300 93-276 (316)
83 PTZ00334 trans-sialidase; Prov 80.8 9.8 0.00021 45.2 10.4 149 130-298 179-351 (780)
84 PF13810 DUF4185: Domain of un 71.7 18 0.00039 38.5 8.6 96 197-298 101-211 (316)
85 COG3507 XynB Beta-xylosidase [ 65.3 6.2 0.00013 44.8 3.7 52 239-300 22-73 (549)
86 PF02435 Glyco_hydro_68: Levan 60.6 2.8E+02 0.0061 31.0 15.6 128 140-276 143-320 (428)
87 PF15176 LRR19-TM: Leucine-ric 50.3 26 0.00057 31.3 4.3 28 30-57 11-38 (102)
88 PF03664 Glyco_hydro_62: Glyco 47.9 3.5E+02 0.0075 28.3 13.7 71 131-211 77-153 (271)
89 PF10898 DUF2716: Protein of u 30.2 34 0.00074 32.5 2.0 37 113-149 80-120 (143)
90 PF12111 PNPase_C: Polyribonuc 27.0 21 0.00046 26.6 0.0 12 114-125 6-17 (39)
91 PF12273 RCR: Chitin synthesis 24.0 71 0.0015 29.3 2.9 11 140-150 81-91 (130)
92 KOG0228 Beta-fructofuranosidas 21.9 2.8E+02 0.0061 31.8 7.4 41 199-246 68-111 (571)
93 COG1621 SacC Beta-fructosidase 21.7 4.9E+02 0.011 29.6 9.4 95 137-237 107-204 (486)
94 PF11807 DUF3328: Domain of un 20.5 1.3E+02 0.0027 28.8 4.0 11 29-39 3-13 (217)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-118 Score=940.37 Aligned_cols=450 Identities=49% Similarity=0.884 Sum_probs=425.6
Q ss_pred CcccccccccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCC
Q 008224 109 WTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN 188 (573)
Q Consensus 109 ~~~~~~~w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~ 188 (573)
|++...+++||.|||||++|||||| +|++|+|||||||||.+++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 6777888999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC--CCCCCCCCCCCeeEeecCCC
Q 008224 189 GVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDG 266 (573)
Q Consensus 189 Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~dG 266 (573)
|||||||+++++|++++||||...+.+|+|++|++.|.+||.|++|.|.++||++.++ .+++...||||+|+|.+++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999988899999999999999999999999999999988 78889999999999999999
Q ss_pred cEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCc
Q 008224 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346 (573)
Q Consensus 267 ~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~ 346 (573)
+|+|++|++.+++|.+++|+|+||++|+..+.++|....+|||||||||||..++.+|++++..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988899999999999999999999999888899999999999999999999999888888999999999999
Q ss_pred ceEEEEEEecCCCCcccCCCCCcccccceeeccCCCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEE
Q 008224 347 VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (573)
Q Consensus 347 ~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL 426 (573)
+++|+||+||+++.+|+||+...++..++|+|||+|||+|||+|..++|||+|||++|+++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999999999999888877789999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEee-ccCccc-----ccCcccc-cC
Q 008224 427 LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSGA-----MEEGYGC-SG 499 (573)
Q Consensus 427 ~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~-l~~~~~-----~~~~~~c-~~ 499 (573)
+|++..|++|.||||+|+|.||.......+..+++|+..++...++.|.|++++|++. |+.+.. ++..+.| .+
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~ 437 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTG 437 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecccccccccCccccccceeeecC
Confidence 9998788999999999999999999888888899999999999999999999999988 654322 4567899 57
Q ss_pred CCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCC-EEEEeecCCCCCCcCCCCCCCCCCe
Q 008224 500 GAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRFVCFESELIPFDCPF 562 (573)
Q Consensus 500 ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~-~~~~c~d~~rSs~~~~~~~~~~~~~ 562 (573)
|...++.+|||||.+||+.+++|+|+|||+|+|... + .+.||+|++|||+++|+++|.-|.|
T Consensus 438 ~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~-~~~v~~csd~~~sSl~~d~~k~~~~af 500 (571)
T KOG0228|consen 438 GSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKK-KYVVLMCSDQSRSSLAEDNYKPSIGAF 500 (571)
T ss_pred CcccccCCCcceEEEEeecCcccceeeeEEEeecCC-cceeEEeccCCCccccccccccceeeE
Confidence 889999999999999999999999999999999876 6 9999999999999999988887744
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-84 Score=698.19 Aligned_cols=331 Identities=35% Similarity=0.714 Sum_probs=281.1
Q ss_pred cccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 008224 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (573)
Q Consensus 116 w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSa 195 (573)
-+||.|||+||.||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
|+ .+|.+.+||||+.+ .+.|.||+|+|+|+ .+|+|+.+|||+..|+++ +.+||||+|+|. ++|+|||+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCcEEEE
Confidence 86 68999999999864 25689999999995 689998789999988886 789999998796 78999999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEcccccccCCCCC-ceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC----
Q 008224 272 IGSKI-GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT---- 345 (573)
Q Consensus 272 vGs~~-~~~G~illY~S~Dl~~W~~~~~l~~~~~~~G-mWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~---- 345 (573)
+||+. +..|.|+||+|+||++|++.+++.......| ||||||||+|+.+ ..+ .+|++..+.++.
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~--------~~~pqg~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVL--------LFWPQGLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--Cce--------EEcceeeecCCCcCCC
Confidence 99984 6689999999999999999999987644444 9999999999864 233 345555554332
Q ss_pred -cceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCC--CCCcCCCCcccCc
Q 008224 346 -KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQT 421 (573)
Q Consensus 346 -~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~--~~~~~~GWag~ls 421 (573)
....|++|+||+++ |..... -..+||+| +|||+|||.++ ++|||++|||++|+.. .++...||+|+||
T Consensus 249 ~~~~~Y~vG~~dg~~--f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGKE--FKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccce--eEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 24679999999974 443332 24589999 89999999995 7999999999999987 5677789999999
Q ss_pred ccEEEEEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEE
Q 008224 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDI 477 (573)
Q Consensus 422 lPReL~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi 477 (573)
|||||+|. +| +|+|+||+||++||..+..+.++.++.. ..+....+.++++
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l 371 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYEL 371 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEE
Confidence 99999995 34 7999999999999999877788887765 3344444445544
No 3
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=4e-80 Score=669.61 Aligned_cols=382 Identities=50% Similarity=0.940 Sum_probs=303.7
Q ss_pred eeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 008224 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (573)
Q Consensus 122 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 201 (573)
||+|+.||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 567
Q ss_pred eEEEEEcccCCC------CcceE-EEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 202 QIVMLYTGSTDK------SVQVQ-NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 202 ~~~~~YTG~~~~------~~q~q-~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
++++||||.... ..+.| ++|.+.| +++|+|+++|||+.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999997421 12333 4454544 48999998899998777666789999999775 44799999998
Q ss_pred ec-CCeeEEEEEEeCCCCCcEEccccccc-CCCC-CceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEE
Q 008224 275 KI-GKTGISLVYQTTDFKTYELLDEYLHA-VPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351 (573)
Q Consensus 275 ~~-~~~G~illY~S~Dl~~W~~~~~l~~~-~~~~-GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~ 351 (573)
+. ++.|+++||+|+||++|++.+.++.. .... +||||||||+|++++ ...||||++|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 74 56799999999999999999998754 2333 599999999997543 23699999998876678999
Q ss_pred EEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCC-CCcCCCCcccCcccEEEEEe
Q 008224 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTES-DDLEKGWASVQTIPRTVLYD 429 (573)
Q Consensus 352 iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~-~~~~~GWag~lslPReL~L~ 429 (573)
+|.|++. .+|+|+... +...+.++|+| +|||+|||.+++.+||||||||++++... .....||+|+|||||||.|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 479887653 22334589999 89999999997556999999999997422 22338999999999999997
Q ss_pred ecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeec--ccceEEEEEEEEEeeccCcccccCcccccCCCcccccc
Q 008224 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDI--GVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAM 507 (573)
Q Consensus 430 ~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~--~~~~qldi~a~f~~~l~~~~~~~~~~~c~~ga~~r~~~ 507 (573)
.++| +|+|+||+||++||.. .....+.+..+....+.. ..+.+++|+++|+... .++
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-------------~~~------ 360 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS-------------GGA------ 360 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEEEeCC-------------Ccc------
Confidence 4455 7999999999999954 334445555433322221 2445778888776430 001
Q ss_pred CcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCC
Q 008224 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFV 549 (573)
Q Consensus 508 gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs 549 (573)
++|||.+.++++.+|.|.|.|...+ -.++.|+++|.
T Consensus 361 ~~~~l~~~~~~~~~~~~~i~~~~~~------~~l~vdR~~~~ 396 (437)
T smart00640 361 GPFGLLVLASEDLSEQTAVYFDVSK------GTLCLDRRSSG 396 (437)
T ss_pred eeEEEEEEeCCCCCceEEEEEEcCC------eEEEEecCCCC
Confidence 3599999999999999999995322 24556886664
No 4
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=4.8e-79 Score=662.57 Aligned_cols=366 Identities=30% Similarity=0.550 Sum_probs=290.9
Q ss_pred cccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 008224 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (573)
Q Consensus 116 w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSa 195 (573)
.+||+|||+|+.||||||||++|++|+|||||||||.++.||+|+||||+|+|||||+++|+||.|++.||..|||||||
T Consensus 12 ~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsa 91 (445)
T TIGR01322 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSA 91 (445)
T ss_pred CcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
++ .+|+++|||||+.. ...|.|++|+|.|+ .+|+|++ +|||.++++....+||||+| |+ .+|+|||+
T Consensus 92 v~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~ 162 (445)
T TIGR01322 92 VD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMV 162 (445)
T ss_pred Ee-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEE
Confidence 76 78999999999752 23688999999985 6999984 59998755544578999999 54 46899999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEcccccccC----CCCC-ceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC
Q 008224 272 IGSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345 (573)
Q Consensus 272 vGs~~-~~~G~illY~S~Dl~~W~~~~~l~~~~----~~~G-mWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~ 345 (573)
+|++. +..|.+++|+|+||++|++.+.+.... ...| ||||||||+|++ ||||.+|..+.
T Consensus 163 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~ 227 (445)
T TIGR01322 163 IGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGL 227 (445)
T ss_pred EEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEecccc
Confidence 99874 456889999999999999999887543 2233 999999999962 57777664431
Q ss_pred ----------cceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCC
Q 008224 346 ----------KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEK 414 (573)
Q Consensus 346 ----------~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~ 414 (573)
....|++|+||..+.+|++++. ..++|+| +|||+|||.++ ++|||+||||++++...++.+.
T Consensus 228 ~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~ 300 (445)
T TIGR01322 228 DASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRD 300 (445)
T ss_pred CcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccC
Confidence 1357999999987889987642 2579999 89999999986 7999999999999887777789
Q ss_pred CCcccCcccEEEEEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEeeccCcccccCc
Q 008224 415 GWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEG 494 (573)
Q Consensus 415 GWag~lslPReL~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~l~~~~~~~~~ 494 (573)
||+|+|||||+|.|. +| +|+|+||+||++||.+... ... ......+... ..+++|+++|+.+
T Consensus 301 ~W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~-~~~~~l~~~~~~~---------- 362 (445)
T TIGR01322 301 GWAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGL-NGEFELILDLEKD---------- 362 (445)
T ss_pred CcccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCC-CceEEEEEEecCC----------
Confidence 999999999999996 45 7999999999999986542 011 1111222222 2366666655321
Q ss_pred ccccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCC
Q 008224 495 YGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVC 550 (573)
Q Consensus 495 ~~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~ 550 (573)
.+ .-|||.+ .+ ..|.|.|.|...+ -.++.|+++|+.
T Consensus 363 ------~~-----~~~~l~~-~~--~~~~~~i~~~~~~------~~l~~dr~~~~~ 398 (445)
T TIGR01322 363 ------SA-----FELGLAL-TN--KGEETLLTIDADE------GKVTLDRRSSGN 398 (445)
T ss_pred ------Cc-----cEEEEEE-eC--CCCeEEEEEECcC------CEEEEEccCCCC
Confidence 11 1378888 55 3467888885332 123358888874
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=3.7e-79 Score=633.87 Aligned_cols=299 Identities=42% Similarity=0.850 Sum_probs=250.5
Q ss_pred eeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 008224 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (573)
Q Consensus 122 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 201 (573)
||+|++||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|++++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeC-CCceecC-CCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCe
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~-~nPVl~~-p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~ 279 (573)
+++|||||...+..|.|++|+|.|.+ ++|+|++ +||||.. |++ ...+||||+|+|. ++|+|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999997653 8999998 4999985 445 7899999999987 4699999999987788
Q ss_pred eEEEEEEeCCCCCcEEcccccccCC-CCCceeeecEEEecccCcccceeccCCCCeEEEEEeee----CCCcceEEEEEE
Q 008224 280 GISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL----DDTKVDHYAIGT 354 (573)
Q Consensus 280 G~illY~S~Dl~~W~~~~~l~~~~~-~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~----~~~~~~~Y~iG~ 354 (573)
|.+++|+|+||++|++.+.+..... ..+||||||||+|++.+. .+...+|||++|. ......+|+||+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999876543 356999999999987521 1224568999998 345678999999
Q ss_pred ecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCC-CcCCCCcccCcccEEEEEeecC
Q 008224 355 YNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESD-DLEKGWASVQTIPRTVLYDNKT 432 (573)
Q Consensus 355 ~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~-~~~~GWag~lslPReL~L~~~~ 432 (573)
||..+.+|+++.. ...++|+| +|||+|+|.++.++|||+||||+++++... ....||+|+|||||||+|++ +
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 9877889987621 25789999 599999999986669999999999987533 23699999999999999975 4
Q ss_pred CceEEEcc
Q 008224 433 GSNVVQWP 440 (573)
Q Consensus 433 g~~L~q~P 440 (573)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 56899998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=1.6e-68 Score=548.25 Aligned_cols=286 Identities=42% Similarity=0.798 Sum_probs=244.6
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
||||||||++|++|+||||||+||.++.|++++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988899999999999876559999999
Q ss_pred cccCC---CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCeeEEE
Q 008224 208 TGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (573)
Q Consensus 208 TG~~~---~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G~il 283 (573)
||... ...|.|++|+|+|. +++|+|...+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|+++
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 45799999999953 489999988998863 3445679999999654 499999999874 3568899
Q ss_pred EEEeCCCCCcEEccccc-ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC------cceEEEEEEec
Q 008224 284 VYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT------KVDHYAIGTYN 356 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l~-~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~------~~~~Y~iG~~d 356 (573)
+|+|+||++|++.+.+. .......|||||+||++.+ ..||||.+|.... ...+|++|++|
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999998774 2222345999999999973 1389998887653 34689999999
Q ss_pred CCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEeecCCce
Q 008224 357 PANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSN 435 (573)
Q Consensus 357 ~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~~g~~ 435 (573)
.. .|+++. ....++|+| +|||+|+|.++ ++|||+||||++++......+.||+|+|||||+|.|++ +.+
T Consensus 221 ~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~--~~~ 290 (298)
T cd08996 221 GT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD--GGR 290 (298)
T ss_pred CC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc--CCE
Confidence 76 455431 124689999 89999999997 79999999999999888888999999999999999975 238
Q ss_pred EEEccHHH
Q 008224 436 VVQWPVEE 443 (573)
Q Consensus 436 L~q~Pv~E 443 (573)
|.|+||+|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=1e-54 Score=442.71 Aligned_cols=266 Identities=23% Similarity=0.408 Sum_probs=219.8
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCC--CCcEEEEEEecCccCeeecceeccC-CCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVP-DQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~w--G~~~WGHAvS~DLVhW~~lp~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
.||. ++|++|+||||||++|.+..| ++++||||+|+|||||+++++||.| +..+|..|||+|||++ .+|+++|||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 4886 999999999999999999988 8999999999999999999999988 4577899999999976 679999999
Q ss_pred cccCCC--CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CCee
Q 008224 208 TGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG 280 (573)
Q Consensus 208 TG~~~~--~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~~G 280 (573)
||.... ..|.|++|+|.|+ ++|+|.+.+||+.+++++...+||||+|+|.+.+|+|+|++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 997642 4688999999884 899999888998755566667899999976545799999999874 4578
Q ss_pred EEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC-CcceEEEEEEecCCC
Q 008224 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNPAN 359 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~-~~~~~Y~iG~~d~~~ 359 (573)
++.+|+|+||++|++.+.+... ....|||||++|+++ .||||..|..+ .....|++|+-. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~---------------g~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG---------------DWWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEEC---------------CEEEEEEEeccCCCcEEEEEeCCC--C
Confidence 8999999999999998776533 234599999999995 27999988764 245679999622 3
Q ss_pred CcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEeecCC
Q 008224 360 DKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (573)
Q Consensus 360 ~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~~g 433 (573)
+.|..... ..+| | +|||+|||.|+ +||||||||++++.+.++.++||+|+|| ||+|.+.+ +|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECC-CC
Confidence 45642211 1378 6 89999999996 8999999999999888888999999999 67777763 55
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=2e-38 Score=318.66 Aligned_cols=242 Identities=26% Similarity=0.322 Sum_probs=190.6
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceec--cCCCCcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAM--VPDQWYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~-~~WGHAvS~DLVhW~~lp~AL--~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
||+++. |+||||||++|.+..|+. ..||||+|+||+||++.+.+| .+...+|..|||+|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565544 889999999999877654 568999999999999999888 56678899999999998765599999999
Q ss_pred ccCC--CCcceEEEEEecCCCCCCcceEEEeCCCcee-----cCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCee
Q 008224 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG 280 (573)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl-----~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G 280 (573)
|... ...|.|++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 45788999999985 899998777754 222233456899999966533499999999864 3457
Q ss_pred EEEEEEeCCCCCcEEccccc--ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC-CcceEEEEEEecC
Q 008224 281 ISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNP 357 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~--~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~-~~~~~Y~iG~~d~ 357 (573)
.+.+|+|+|+++|++.+.+. .......+||||++|+++ .||||..+... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~---------------g~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID---------------GRWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC---------------CEEEEEEEecCccCCccEEEEeccc
Confidence 88899999999999988763 222234599999999985 27999888764 4467899998765
Q ss_pred CCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCC
Q 008224 358 ANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 405 (573)
Q Consensus 358 ~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~ 405 (573)
. .|+|.. ...+|+| +|||+|++.+..++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455431 2357888 8999999998657999999999886
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=2.9e-36 Score=302.70 Aligned_cols=269 Identities=26% Similarity=0.389 Sum_probs=204.8
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
|||+ +++++|+||||||++|.+ ++++|+|++|+||+||++++.+|. |..+++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999875 678999999999999999998884 67778889999999987655999999
Q ss_pred EcccCC-CCcceEEEEEecCCCCCCcceEEEeCCCceecC-CCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCeeEEE
Q 008224 207 YTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (573)
Q Consensus 207 YTG~~~-~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G~il 283 (573)
||+... ...|.|++|+|+|+. ..|++...+||+.. +.......+|||+|++ +++|+|||++++.. +..+.+.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~-d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFE-DDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEE-cCCCCEEEEEccccCCCCCeEE
Confidence 999753 346889999998863 45776655566543 2233456899999954 46699999999763 2356788
Q ss_pred EEEeCCCCCcEEcccc--cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC------CcceEEEEEEe
Q 008224 284 VYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD------TKVDHYAIGTY 355 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~------~~~~~Y~iG~~ 355 (573)
+++|+|+.+|+..+.. .......+++|||++|++. .+|+|..|... .....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~---------------g~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN---------------GKYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC---------------CEEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 2222345699999999985 27888888654 23456888764
Q ss_pred cCCCCcccCCCCCc-ccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEE
Q 008224 356 NPANDKWTPDNPEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVL 427 (573)
Q Consensus 356 d~~~~~f~pd~~~~-d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~ 427 (573)
+ .+.|++..... -.-.....|.+ .+||++.|.++ ++|+++++|+.+++.... ...+|+++|+|||+++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 3 45676543210 00011234555 79999999987 799999999999875444 6689999999999864
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.94 E-value=1.7e-25 Score=235.57 Aligned_cols=193 Identities=21% Similarity=0.194 Sum_probs=139.2
Q ss_pred cCCcc-eeEECCEEEEEEeeCCCC----CCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 008224 131 NDPNG-PLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 131 NDPNG-~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
-|..| ++-++|+.-+|+...|.. +.|+.++|||++|+||+||++.+. |.|+.++|..|||||||++..||+++|
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 35566 344688755999877654 468899999999999999999554 678899999999999998766799999
Q ss_pred EEcccCC----CCcceEEEEEecCCCCCCcceEEEeC--CCceecCC--------------CCCCCCCCCCCeeEeecCC
Q 008224 206 LYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP--------------RHIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 206 ~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~--~nPVl~~p--------------~g~~~~~fRDP~V~w~~~d 265 (573)
||||+.. .....|++|.+.+.. +..|.+.. ..+++.+. +.-...+||||+|+..+.+
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 9999853 235678887775531 22444321 12344321 1112578999999443337
Q ss_pred CcEEEEEeeecC-C---------------------------eeEEEE--EEeCCCCCcEEcccccccCCCCCceeeecEE
Q 008224 266 GKWRLTIGSKIG-K---------------------------TGISLV--YQTTDFKTYELLDEYLHAVPGTGMWECVDFY 315 (573)
Q Consensus 266 G~w~MvvGs~~~-~---------------------------~G~ill--Y~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f 315 (573)
|+|||+++++.. . .|+|.+ ++|+|+.+|++.++|+.+......||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999998632 2 255444 5778999999999998654334579999999
Q ss_pred EecccCcccceeccCCCCeEEEEEeee
Q 008224 316 PVAINGSVGLDTSATGPGIKHVLKASL 342 (573)
Q Consensus 316 ~l~~~~~~gl~~s~~g~~~k~VL~~S~ 342 (573)
+++ .||+|..|.
T Consensus 244 ~~~---------------gk~yL~~s~ 255 (349)
T cd08997 244 FHN---------------GKYYLFTIS 255 (349)
T ss_pred EEC---------------CEEEEEEeC
Confidence 995 278888773
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.88 E-value=1e-21 Score=201.31 Aligned_cols=189 Identities=19% Similarity=0.263 Sum_probs=140.9
Q ss_pred eeeecCCCcccCCcceeEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEecCcc-CeeecceeccCC--CCcCCCcEEe
Q 008224 121 FHFQPEKNWMNDPNGPLFY-KGWYHLFYQYNPDSAV---W-GNITWGHAVSADLI-HWLYLPIAMVPD--QWYDINGVWT 192 (573)
Q Consensus 121 yHf~P~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~---w-G~~~WGHAvS~DLV-hW~~lp~AL~Pd--~~yD~~Gv~S 192 (573)
.+|..+..++-+|. +++. +|+||||||.+|.+.. | ....||||+|+|+. +|+..+++|.|+ ..+|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46778888999997 6665 4899999999887644 2 23569999999987 899999999887 4689999999
Q ss_pred eeEEEccCCeEEEEEcccCC-------CCcceEEEEEecCCCCCCcceEEEeCCCceecCC------------------C
Q 008224 193 GSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP------------------R 247 (573)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p------------------~ 247 (573)
++++. .+|+++|+|||... ...+.+++|++.+. +..|++. .+|||.+. .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99975 67999999999753 23567778888763 2466664 34554220 0
Q ss_pred -------------------------------------------CCCCCCCCCCeeEeecCCCcEEEEEeeec----CCee
Q 008224 248 -------------------------------------------HIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKTG 280 (573)
Q Consensus 248 -------------------------------------------g~~~~~fRDP~V~w~~~dG~w~MvvGs~~----~~~G 280 (573)
......+|||+| |+ .+|+|||++++.. +..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 001235799999 76 4699999999874 2467
Q ss_pred EEEEEEeCCCCCcEEcccccc----c-CC----CCCceeeecEE-Eec
Q 008224 281 ISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVA 318 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~~----~-~~----~~GmWECPd~f-~l~ 318 (573)
.+.+|+|+|+++|++.+.++. . .. ...|||||++| ...
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 888999999999999987742 1 11 23599999999 664
No 12
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.83 E-value=2.8e-19 Score=184.51 Aligned_cols=179 Identities=21% Similarity=0.272 Sum_probs=131.3
Q ss_pred ccccccceeeeecCCCc----ccCCcceeEECCEEEEEEeeCCCCC--CCCCcEEEEEEecCccCeeecceeccCCCCcC
Q 008224 113 MFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSA--VWGNITWGHAVSADLIHWLYLPIAMVPDQWYD 186 (573)
Q Consensus 113 ~~~w~Rp~yHf~P~~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~--~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD 186 (573)
+..|+|...-+.+...| +-+|. +++++|+||||||++|..+ .++.++||||+|+||++|++.++++. +
T Consensus 58 l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~-----~ 131 (294)
T cd08984 58 GATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL-----D 131 (294)
T ss_pred CCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc-----C
Confidence 55676555333222222 34676 7889999999999998753 34578999999999999999887632 2
Q ss_pred CCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCC
Q 008224 187 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 266 (573)
Q Consensus 187 ~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG 266 (573)
..++++++++.+.||+++||||+... .+.+++|.+.|+ .+|++. .+++.. ...++|+| |+ .+|
T Consensus 132 ~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g 194 (294)
T cd08984 132 SDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKG 194 (294)
T ss_pred CCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECC
Confidence 45789999987667999999998643 345689999884 899985 355542 23479999 54 478
Q ss_pred cEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCC----CCCceeeecEEEec
Q 008224 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP----GTGMWECVDFYPVA 318 (573)
Q Consensus 267 ~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~----~~GmWECPd~f~l~ 318 (573)
+|||+++. ..| +.+|+|+|+.+|++.+.++.... ...+++||+|+...
T Consensus 195 ~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 195 YYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred EEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99999854 235 56999999999999998775321 12378999999764
No 13
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.82 E-value=7.3e-19 Score=178.74 Aligned_cols=160 Identities=19% Similarity=0.254 Sum_probs=122.1
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccC--CCCcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVP--DQWYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp-~AL~P--d~~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
|| |+++++|+||||||.++.. +.++||||+|+|++||+..+ +.|.| +..++..||++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 57 5889999999999987643 56899999999999999875 34556 5577889999999874 6999999999
Q ss_pred ccCC-CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEee-cCCCcEEEEEeeec---CCeeEEE
Q 008224 209 GSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA-GPDGKWRLTIGSKI---GKTGISL 283 (573)
Q Consensus 209 G~~~-~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~-~~dG~w~MvvGs~~---~~~G~il 283 (573)
+... ...+.+++|.|+|+ .+|+|... + +. + ..||+.+ |. ..+|+|+|+..... +..+.+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~~-~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~ 141 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLGT-S-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMW 141 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEecc-c-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEE
Confidence 9763 34678999999985 89999732 1 11 1 2478888 43 25899999996432 3456788
Q ss_pred EEEeCCCCCcEEcccccccCCCCCceeeec
Q 008224 284 VYQTTDFKTYELLDEYLHAVPGTGMWECVD 313 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l~~~~~~~GmWECPd 313 (573)
+++|+|+.+|+..+.++.. ..+.||+-.
T Consensus 142 lA~S~Dl~~W~~~~~~~~~--~~~~wd~~~ 169 (268)
T cd08993 142 LSFSPDLVHWGNHRFVLSP--RPNHWEQLK 169 (268)
T ss_pred EEECCCcCccCCCeEEecC--CCCceeece
Confidence 9999999999987776543 223576543
No 14
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.81 E-value=9.9e-19 Score=178.10 Aligned_cols=192 Identities=15% Similarity=0.162 Sum_probs=138.5
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCC-CCcCCCcEEeeeEEEccCCeEEE
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd-~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
.||++||+ +++++|+||||++....+ +....|.+++|+||+||++++.+|.+. ..++..++|.++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~--~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAG--GEQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCC--CCeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 46899998 578899999999876533 224679999999999999999998764 356778999999875 6899999
Q ss_pred EEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEE
Q 008224 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY 285 (573)
+||+. +.+++|+|+|+. ..|++..++|++.... ....++||.|+ .+.+|+|||+.++. .+..++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998753 5688755678876422 23578999994 45789999999863 1222233
Q ss_pred EeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEE
Q 008224 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (573)
Q Consensus 286 ~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG 353 (573)
-|.|+.+|+.....+ .....++.|||.+|+.. .+++|..|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~---------------G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGS-EITPKNYFEGPFMFKRN---------------GIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceee-eccCCCceecceEEEEC---------------CEEEEEEECCCCCCCCceEE
Confidence 578898887543332 11223589999999874 26777777654332234444
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.73 E-value=2.3e-16 Score=160.81 Aligned_cols=206 Identities=19% Similarity=0.161 Sum_probs=138.5
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-cCCCcEEeeeEEEccCCeEEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~-yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
+.+-||. +++++|+|+||+..... ..|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 4568997 78889999999985432 67999999999999999988877654 4567889888764 68999999
Q ss_pred EcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee---EE
Q 008224 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG---IS 282 (573)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G---~i 282 (573)
||+.... ..+.+++|+|.|.. ..|++....++. .+. .....+||.|+ .+++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~-~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLC-CPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEe-cCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceE
Confidence 9998642 34667788887652 478886433333 222 23567999995 4568999999987532211 12
Q ss_pred EEE-EeCCCCCcEEccc-ccccC--CCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcce--EEEEEE--
Q 008224 283 LVY-QTTDFKTYELLDE-YLHAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD--HYAIGT-- 354 (573)
Q Consensus 283 llY-~S~Dl~~W~~~~~-l~~~~--~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~--~Y~iG~-- 354 (573)
.+. .|+|+.+|..... ++... ....++|||.+|+.. .+++|..|....... .|.+|-
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~---------------g~yyl~~S~~~~~~~~~~y~i~~~~ 214 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG---------------GYYYLFYSAGGCCSGASTYAVGVAR 214 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC---------------CEEEEEEEcCCccCCCCCEEEEEEE
Confidence 232 3689988864332 22211 123489999999884 278888886532221 455542
Q ss_pred ecCCCCcccC
Q 008224 355 YNPANDKWTP 364 (573)
Q Consensus 355 ~d~~~~~f~p 364 (573)
-+...+.|+.
T Consensus 215 s~~~~Gpw~~ 224 (287)
T cd08999 215 SKSLLGPYVK 224 (287)
T ss_pred eCCCcCCcCC
Confidence 2223456664
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.67 E-value=2.9e-15 Score=152.76 Aligned_cols=195 Identities=14% Similarity=0.154 Sum_probs=138.5
Q ss_pred CCcceeEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEccCCeEEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLVhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
||. +++++|+|+||.......+. +....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|+
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 887 77889999999987654432 2234589999999999999999887543 36788999999864 79999999
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~ 286 (573)
||+......+.+++|+|+|+. ..|+.....|++... .......||.++ .+++|++||+.++. .++.+.-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--SGGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--CCCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEEe
Confidence 999754345678899997752 579886555555421 123567899995 45789999999864 23444456
Q ss_pred eCCCCCcEEccccccc-----CCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEE
Q 008224 287 TTDFKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (573)
Q Consensus 287 S~Dl~~W~~~~~l~~~-----~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG 353 (573)
|+|+.+|+.....+.. ....+..|+|.+|+.. .+++|..|........|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------G~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN---------------GTYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC---------------CEEEEEEECCCCcEEEEEEc
Confidence 8899999754443321 1123478999999874 27888888754334445544
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.62 E-value=3.3e-14 Score=142.49 Aligned_cols=202 Identities=22% Similarity=0.186 Sum_probs=133.3
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
||. +++++|+|+|||..... ....++.++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 887 78899999999987542 234678999999999999998875 44456678999999875 579999999
Q ss_pred cccCC-CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC--CeeEEEE
Q 008224 208 TGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLV 284 (573)
Q Consensus 208 TG~~~-~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--~~G~ill 284 (573)
|+... ...+.+++|+|+|+ ..|.+....+ .+ .......+||.+++ +++|++||+.++... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~---~~-~~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKVIR---PP-TSNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccccC---cC-ccCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcEEE
Confidence 99743 23567889999886 4554432111 11 11234678999954 567999999987532 2455677
Q ss_pred EEeCCCCCcEEcccc-c-ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEEE--ecCCCC
Q 008224 285 YQTTDFKTYELLDEY-L-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT--YNPAND 360 (573)
Q Consensus 285 Y~S~Dl~~W~~~~~l-~-~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG~--~d~~~~ 360 (573)
.++++...|...... . .......+.|||.+|+.. .+++|..|........|.++- -+...+
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~~y~~~~~~s~~~~G 210 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN---------------GYYYLTYSANGTGDYGYNIGYATSDSIDG 210 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEEC---------------CEEEEEEEeCCCCCCCceEEEEECCCCCC
Confidence 887665444322221 1 111233489999999874 278888876543222344442 333344
Q ss_pred cccC
Q 008224 361 KWTP 364 (573)
Q Consensus 361 ~f~p 364 (573)
.|+.
T Consensus 211 p~~~ 214 (271)
T cd08978 211 PYVK 214 (271)
T ss_pred CcCc
Confidence 5553
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.57 E-value=1.8e-13 Score=140.54 Aligned_cols=180 Identities=17% Similarity=0.108 Sum_probs=124.7
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEEEEEccc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGS 210 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~ 210 (573)
||. +++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 887 78889999999876542 23578999999999999998887655 36778999999865 689999999997
Q ss_pred CCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC---eeEEEEEE
Q 008224 211 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK---TGISLVYQ 286 (573)
Q Consensus 211 ~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~---~G~illY~ 286 (573)
... ..+.+++|+|+|+. ..|++....++ .. + ...+||.+++ +.+|+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf~-d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPFI-DDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceEE-CCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778999998752 46777532232 21 1 3567999954 5679999999864321 23444446
Q ss_pred eCCCCCcEEccc--c--ccc--------------CCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 287 TTDFKTYELLDE--Y--LHA--------------VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 287 S~Dl~~W~~~~~--l--~~~--------------~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
+.|+.+|.-... . ... .....+-|+|.++..+ .+++|..|...
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~ 204 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN---------------GRYYLTYSANH 204 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC---------------CEEEEEEECCC
Confidence 788877752111 0 000 0112378999999885 26888777543
No 19
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.52 E-value=8.5e-13 Score=135.60 Aligned_cols=179 Identities=20% Similarity=0.150 Sum_probs=120.9
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-------CcCCCcEEeeeEEEccCCe
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-------WYDINGVWTGSATILPDGQ 202 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~-------~yD~~Gv~SGSavv~~dG~ 202 (573)
+.||. +++++|+|+||+... .+++++|+||+||++.+.+|.+.. ..+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46997 889999999999864 689999999999999998886543 23567899999865 6999
Q ss_pred EEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeE
Q 008224 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (573)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ 281 (573)
++|+||+.... ..+.+++|+|+|. ....|++. +||+...++......+||.++. +++|++||+.++.. .|+
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~---~~gpw~~~--~~v~~~~~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~~--~~i 141 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTL---PDGPWTDH--GIVIESGPGRDDPNAIDPNVFY-DEDGKLWLSFGSFW--GGI 141 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCC---CCCCCEEc--ceeeecCCCCCCcccccCCEEE-cCCCCEEEEeeecc--CCE
Confidence 99999987543 3466789999874 12579874 5887654332334678999954 56899999998642 222
Q ss_pred EEEEE-eCC---CCCcEEccc-ccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 282 SLVYQ-TTD---FKTYELLDE-YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 282 illY~-S~D---l~~W~~~~~-l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
.+.+ +.| ...|..... +.......+..|-|-+|.-. .+++|..|..
T Consensus 142 -~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~---------------g~YYl~~S~~ 192 (288)
T cd08998 142 -FLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG---------------GYYYLFVSYG 192 (288)
T ss_pred -EEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC---------------CEEEEEEEcc
Confidence 1222 222 123321111 11111123467999998774 2677877753
No 20
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.50 E-value=5.4e-13 Score=141.12 Aligned_cols=171 Identities=21% Similarity=0.266 Sum_probs=121.3
Q ss_pred cceeeeecCCCc-ccCCcceeEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEecCccCeeecceeccCCC
Q 008224 118 RTSFHFQPEKNW-MNDPNGPLFYKGWYHLFYQYNPD-----------SA--VWGNITWGHAVSADLIHWLYLPIAMVPDQ 183 (573)
Q Consensus 118 Rp~yHf~P~~gW-mNDPNG~~y~~G~YHLFYQ~nP~-----------~~--~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~ 183 (573)
.|..=+.+..+- ..||..+++.+|+|||||++... .+ .|.....+||+|+||+||++.+.+|.+..
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 344444444443 46998899999999999996431 11 24567789999999999999998886543
Q ss_pred --CcCCCcEEeeeEEEccCCeEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCC----------
Q 008224 184 --WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---------- 247 (573)
Q Consensus 184 --~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~---------- 247 (573)
.||..++|..+++ ..+|+++|+|++.... ..+.+++|++.++. ..|++. .+||+.+..
T Consensus 104 ~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 5899999999986 5799999999975321 23567999998752 359986 589986521
Q ss_pred --------CCCCCCCCCCeeEeecCCCcEEEEEeeecC--------CeeEEEEEEeCCCC-CcEEc
Q 008224 248 --------HIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGISLVYQTTDFK-TYELL 296 (573)
Q Consensus 248 --------g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--------~~G~illY~S~Dl~-~W~~~ 296 (573)
.++...+.||.|+ . .+|+|||++.+... ..-.+.|..|++.. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1234456899985 3 57999999965321 11246678888865 57654
No 21
>PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides. ; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B.
Probab=99.47 E-value=4.6e-15 Score=132.09 Aligned_cols=97 Identities=41% Similarity=0.621 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH-HHhcCCCCCCCCC--CCCCCCCCCCCCCCCCCCccc
Q 008224 14 YPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI-INQTQKPLPSQNN--IVPTSKPTSFSNPEPRGVAEG 90 (573)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 90 (573)
|+|||+.+.+... ++.++||++|.+++|+++++||++||+++ ++.++. +.... .......++...+.|||+++|
T Consensus 7 Y~PLP~~~~~~~~-~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~SRGv~~G 83 (106)
T PF11837_consen 7 YTPLPDSSESAPG-PGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQS--PDGSSVSSSSPPPSPETATPVSRGVSEG 83 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCcccCC-CCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccCC--CCccccccCCCCCCCccccCCCCCcccC
Confidence 9999975554432 24556888899999999999999999998 222211 11111 122334445555689999999
Q ss_pred ccccccccccccccCCCCCccccc
Q 008224 91 VSAKSNSHLLRNIKGSYNWTNAMF 114 (573)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ 114 (573)
||||++....+. ..+|||+|+||
T Consensus 84 VSEKS~~~~~~~-~~~FpWtNaML 106 (106)
T PF11837_consen 84 VSEKSNGAGSGA-GNSFPWTNAML 106 (106)
T ss_dssp --------------------HHHH
T ss_pred cccccccCccCC-CCCCCCccccC
Confidence 999998874444 67899999997
No 22
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.46 E-value=3.2e-12 Score=132.15 Aligned_cols=169 Identities=18% Similarity=0.237 Sum_probs=119.5
Q ss_pred ccCCcceeEE--CCEEEEEEee-C---CCC-CCCCC-cEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccC
Q 008224 130 MNDPNGPLFY--KGWYHLFYQY-N---PDS-AVWGN-ITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPD 200 (573)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~-n---P~~-~~wG~-~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~d 200 (573)
.-||. +++. +|+|||||.. . |.. ..|.. ..+|+|+|+| |+||+.++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 78998 8887 7899999942 1 111 23432 5799999999 99999998877665555667799999864 68
Q ss_pred CeEEEEEcccCC-----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 201 GQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 201 G~~~~~YTG~~~-----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
|+++||||.... ......++|+|+| |.+|++.+ ++... .....||.|+ +..+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 1235678899987 37899863 33211 1245699995 44679999999643
Q ss_pred cCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEec
Q 008224 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (573)
Q Consensus 276 ~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~ 318 (573)
.. ...+.+..|+|+.+|+..+.++.. ..-|.|.+|+..
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~~----~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLGD----RPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCccccC----CCCCCCCeeEEC
Confidence 22 223456789999999987655431 134899999864
No 23
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.40 E-value=9.1e-11 Score=119.94 Aligned_cols=197 Identities=18% Similarity=0.092 Sum_probs=131.7
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC----CcCCCcEEeeeEEEcc-CCeEEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVML 206 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~----~yD~~Gv~SGSavv~~-dG~~~~~ 206 (573)
|| ++++++|+|++|--....+..+ ...|-..+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~~-~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDTA-FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCcc-cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 45 3888999999998765432111 24578889999999999999998764 3455679999997643 6999999
Q ss_pred EcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEE
Q 008224 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (573)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY 285 (573)
|+....+ ....+++|+|++.. ..|+... .+. +.+ ...|||.+++ ++||++||++++..+. .+.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~-DdDG~~Yl~~~~~~~~--~i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFV-DDDGTAYLLYSDRDNS--DLYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEE-cCCCCEEEEEecCCCC--ceEEE
Confidence 9986432 34578899998653 5677642 221 222 4679999955 5789999999875322 23344
Q ss_pred E-eCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC---CcceEEEEEEecCCCCc
Q 008224 286 Q-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD---TKVDHYAIGTYNPANDK 361 (573)
Q Consensus 286 ~-S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~---~~~~~Y~iG~~d~~~~~ 361 (573)
+ ++|+..+.-. ... .......|||.+|+.+ .+++|..|... .....|++.+ ...+.
T Consensus 149 ~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~---------------g~YYL~~S~~t~~~~~~~~y~~s~--s~~GP 208 (265)
T cd08985 149 RLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN---------------GKYYLLTSGLTGWNPNDARYATAT--SILGP 208 (265)
T ss_pred EeCCCcccccce--EEE-ccCCCccccceEEEEC---------------CEEEEEEccCCCccCCceEEEEec--CCCCC
Confidence 4 3677777532 211 1123478999999985 27888887542 2345677664 22356
Q ss_pred ccC
Q 008224 362 WTP 364 (573)
Q Consensus 362 f~p 364 (573)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 653
No 24
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.32 E-value=4.5e-11 Score=120.29 Aligned_cols=155 Identities=21% Similarity=0.285 Sum_probs=106.2
Q ss_pred cccccccccceeee--ecC----CCcccCCcceeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc--
Q 008224 110 TNAMFTWQRTSFHF--QPE----KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV-- 180 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf--~P~----~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~-- 180 (573)
+.....|+|..--+ .|. .+.+-||. +++.+ |+|||||..+... ......+++|+|+|+++|+..+..+.
T Consensus 40 S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~ 117 (276)
T cd08979 40 SDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPR 117 (276)
T ss_pred cCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCccee
Confidence 44455565544322 122 24466887 66677 9999999976532 23357899999999999998875542
Q ss_pred -----CCCCcCCCcEEeeeEEEccC-CeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCC
Q 008224 181 -----PDQWYDINGVWTGSATILPD-GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDF 254 (573)
Q Consensus 181 -----Pd~~yD~~Gv~SGSavv~~d-G~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~f 254 (573)
+...++...+.++.++..++ |+++|+|++........+.+|.|.|+ .+|++....+ ....+.....+
T Consensus 118 ~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~~~ 190 (276)
T cd08979 118 WYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDGQL 190 (276)
T ss_pred eeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCCcC
Confidence 22334556788999876544 89999999876545577889999884 8999875333 11222344678
Q ss_pred CCCeeEeecCCCcEEEEEeee
Q 008224 255 RDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 255 RDP~V~w~~~dG~w~MvvGs~ 275 (573)
.+|.++ + .+|+|+|++.+.
T Consensus 191 e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 191 EVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred ccceEE-E-ECCEEEEEEEec
Confidence 899994 3 469999999875
No 25
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.29 E-value=3e-10 Score=115.49 Aligned_cols=183 Identities=20% Similarity=0.170 Sum_probs=126.0
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC--CCcE-EeeeEEEccCCeEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--INGV-WTGSATILPDGQIV 204 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD--~~Gv-~SGSavv~~dG~~~ 204 (573)
+..-||. +++.+|.|+||+...... ..+..++|+||+||+..+.++.+....+ ..+. |.+.++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5668998 889999999999876533 4578899999999999998887665332 3333 999986 5799999
Q ss_pred EEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC--eeEE
Q 008224 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGIS 282 (573)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~--~G~i 282 (573)
|+|+.......+.+.+|++.+.. ..|+.... .++. ...-.||.+++ +++|++||+.+..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~~-~~~~------~~~~iD~~vf~-d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPGK-IPIP------GGNSIDPSVFV-DDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEEE-EEEE------SSSSSSEEEEE-ETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----cccccccc-eeec------cccccCceEEE-ecCCCcEEeCcccCCCccceeE
Confidence 99993333345668899998763 58887632 2221 23557999954 5679999999986432 2334
Q ss_pred EEEE-eCCCCCcEEcc-ccc-ccC--CCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 283 LVYQ-TTDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 283 llY~-S~Dl~~W~~~~-~l~-~~~--~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
.+.+ +.|...+.... ... ... ...+.-|+|-+|..+ .+++|..|...
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~---------------g~yYl~~s~~~ 200 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG---------------GKYYLFYSAGG 200 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET---------------TEEEEEEEESG
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcC---------------CCEEEEEeccC
Confidence 4444 56777776554 222 211 234588999999885 26788888544
No 26
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.26 E-value=4.2e-10 Score=115.83 Aligned_cols=178 Identities=20% Similarity=0.177 Sum_probs=115.5
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC--c----CCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--Y----DINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~--y----D~~Gv~SGSavv~~dG 201 (573)
+.+-||. +++++|.|+||..... + ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~----~-~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFE----Y-FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCcc----c-CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677998 8889999999853211 1 134789999999999999988854321 1 346799999865 699
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC----
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---- 277 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~---- 277 (573)
+++|+|++........+.+|.+++.. ..|+. |++.. ...+||.+++ +++|++||+.++...
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998754333456788887653 35652 33321 1568999965 578999999886421
Q ss_pred -CeeEEEEEEeCCCCCcEEccccc--ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 278 -KTGISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 278 -~~G~illY~S~Dl~~W~~~~~l~--~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
..+.+.+.+. |...|+..+... .........|+|.+|+.+ .+++|..|..
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~---------------g~YYl~ys~~ 196 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD---------------GWYYLLIAEG 196 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC---------------CEEEEEEecC
Confidence 1233444433 333454433321 111112467999999874 2788877754
No 27
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.23 E-value=8.4e-10 Score=115.46 Aligned_cols=186 Identities=13% Similarity=0.219 Sum_probs=121.8
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCC---------CCCCcEEEEEEecCccCeeecceeccCC--CCcCCCcEEeeeEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSA---------VWGNITWGHAVSADLIHWLYLPIAMVPD--QWYDINGVWTGSAT 196 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~---------~wG~~~WGHAvS~DLVhW~~lp~AL~Pd--~~yD~~Gv~SGSav 196 (573)
.+.-||. ++.++|+|+||....-... .+....+--.+|+||+||+.++.++.|. ..| ..++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w-~~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW-AGNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc-ccccCCCceE
Confidence 4678998 6788999999987643221 1223457788999999999999988732 233 3478999987
Q ss_pred EccC----CeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC-CCCCCCC-CCCCeeEeecCCCcEEE
Q 008224 197 ILPD----GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKD-FRDPTTAWAGPDGKWRL 270 (573)
Q Consensus 197 v~~d----G~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p-~g~~~~~-fRDP~V~w~~~dG~w~M 270 (573)
. .+ |+++|+|+.. ...+++|+|+++. -.|+...+.|++... ++..... -.||.+++ ++||++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 5 55 9999999863 2347899987653 579875456777532 2322222 36999955 57899999
Q ss_pred EEeeecC-----CeeEEEEEE-eCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 271 TIGSKIG-----KTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 271 vvGs~~~-----~~G~illY~-S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+.|+... ..+.+.+.+ ++|+..- .++... ....+.+|.|.+|+.+ .+++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~---------------G~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN---------------GTYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC---------------CEEEEEEeCC
Confidence 9986421 112344444 3566543 232211 1112479999999874 2788877754
No 28
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.23 E-value=9.8e-10 Score=113.12 Aligned_cols=182 Identities=13% Similarity=0.087 Sum_probs=120.2
Q ss_pred CcccCCcceeEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEcc-CCeE
Q 008224 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVW-GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP-DGQI 203 (573)
Q Consensus 128 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~w-G~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~-dG~~ 203 (573)
+-+.||. +++. +|+||||+.-.-....+ +.....+++|+||+||+....++.... ...++|...++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4568998 7776 89999999754322222 346789999999999999887653221 34578999987654 7999
Q ss_pred EEEEcccCCC---Cc--ceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC
Q 008224 204 VMLYTGSTDK---SV--QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (573)
Q Consensus 204 ~~~YTG~~~~---~~--q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~ 278 (573)
+|+|+..... .. ..+..|.+.| +.+|+.. .+++. ++ ....|+.++ + .+|+|||++....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~p--~~~~~--~~---~~~ID~~v~-~-~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTEP--KVWID--LG---ANVIDTTVV-K-VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCc-----ccccCCC--eEeec--CC---CCeEeeEEE-E-eCCEEEEEEecCCC-
Confidence 9999987542 12 2233344334 3788752 45554 22 356799985 3 35999999865322
Q ss_pred eeEEEEEEeCCCC-CcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 279 TGISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 279 ~G~illY~S~Dl~-~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
..+.+.+|++|. .|+...... .......|-|.+|+..+ +.+|+|..+..
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~-------------~~~y~L~~d~y 207 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNN-------------GGGWYLYGDNY 207 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECC-------------CCEEEEEEEEC
Confidence 346677899877 677654321 11123689999999863 13688876543
No 29
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.21 E-value=9.2e-11 Score=122.98 Aligned_cols=160 Identities=23% Similarity=0.246 Sum_probs=108.8
Q ss_pred ceeEECCE--EEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccC
Q 008224 135 GPLFYKGW--YHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (573)
Q Consensus 135 G~~y~~G~--YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (573)
|.+.++|. |||+|...-. ..+..+.|.|.|+|.+||+..+ +.|.|+..|+..||....++. .+|+++|+||+.+
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 45656665 8888865422 2223489999999999999875 689999999999999999975 6899999999987
Q ss_pred CCCcceEEEEEecCCCCCCcceEEEeCCCceecCCC---CCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeC
Q 008224 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (573)
Q Consensus 212 ~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~ 288 (573)
..+ -.+++|+|+|. .+|+|.. +++.... ......-||=..+-...+|+|+|+.+ .+.+.+..|+
T Consensus 113 ~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 543 45799999984 9999985 2222111 00011124544432246899999987 3457788899
Q ss_pred CCCCcEEcccccccCCCCCceee
Q 008224 289 DFKTYELLDEYLHAVPGTGMWEC 311 (573)
Q Consensus 289 Dl~~W~~~~~l~~~~~~~GmWEC 311 (573)
|+++|+.....+.. ...++||+
T Consensus 180 Dl~~W~~~~~~~~~-~~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLS-PRPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB---STTSSCS
T ss_pred Cccccccccccccc-CCCCcChh
Confidence 99999876653322 23457887
No 30
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.10 E-value=6.4e-09 Score=107.88 Aligned_cols=135 Identities=19% Similarity=0.154 Sum_probs=94.2
Q ss_pred CcccCCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEE
Q 008224 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIV 204 (573)
Q Consensus 128 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~ 204 (573)
.++-||. ++++ +|+|+||..............+.+.+|+||+||+..+.++.+.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578997 7787 99999999754322101123578999999999999999886543 3445689999985 5799999
Q ss_pred EEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 205 MLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
|+|+..... ....+.+|+++++. -.|+.....|+... + ....||.++ .+.||++||+.+.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~f-~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTLY-VDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCceE-EcCCCCEEEEEEe
Confidence 999876433 22346788887652 46887543454221 1 234699984 4578999999874
No 31
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.09 E-value=4.5e-09 Score=111.56 Aligned_cols=186 Identities=19% Similarity=0.222 Sum_probs=119.0
Q ss_pred cccccccceeeeec-CCC-c----ccCCcceeEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-Ceeecc-eeccCC
Q 008224 112 AMFTWQRTSFHFQP-EKN-W----MNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLP-IAMVPD 182 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P-~~g-W----mNDPNG~~y~~G~YHLFYQ~nP~-~~~wG~~~WGHAvS~DLV-hW~~lp-~AL~Pd 182 (573)
....|+|-..=|.+ +.+ | +.-|. +++++|+|||||+..-. ...-...+.|.|+|+|.. .|+++. +.|.|+
T Consensus 88 Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~ 166 (349)
T cd08992 88 DGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPS 166 (349)
T ss_pred CCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCC
Confidence 34567766522322 121 3 34465 77889999999985321 111123467888888876 698764 445554
Q ss_pred C------------------CcCCCcEEeeeEEEccCCeEEEEEcccCC-------CCcceEEEEEecCCCCCCcceEEEe
Q 008224 183 Q------------------WYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 183 ~------------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
. .+|..+|...+++ ..+|+++|||+|+.. ...+.+++|+++++- -.|+|.
T Consensus 167 ~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~ 241 (349)
T cd08992 167 NDGIWKGDEDNRFLVKKKGSFDSHKVHDPCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKS 241 (349)
T ss_pred cCCceeeccCceeEeccCCCcccCceECCEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeC
Confidence 2 3566777777764 579999999999752 134678999998874 569999
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCcE-EEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEE
Q 008224 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYP 316 (573)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w-~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~ 316 (573)
+.|||+... + ..+| |+.. +.+ .|+..-..+ .|. +..|+|.++|+....+.......|..+|||-+.
T Consensus 242 ~~nPi~~~~------~--~~~~-~~~~-~~~~~~~~~d~~~-~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (349)
T cd08992 242 PYNPITNSG------H--ETCV-WQYK-GGIAAMLTTDGPE-KNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADE 308 (349)
T ss_pred CCCcccCCC------C--ceEE-EecC-CceEEEEeccCCC-Cce--EEeCCCCccEEEeeeccCCCccccCccCccccc
Confidence 899998531 1 2377 9744 455 555543222 344 567999999998766643333456667777543
No 32
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.01 E-value=2.1e-08 Score=103.06 Aligned_cols=180 Identities=18% Similarity=0.170 Sum_probs=111.5
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCeE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQI 203 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~y-------D~~Gv~SGSavv~~dG~~ 203 (573)
.||. ++.++|+|+||.... .+.-++|+||+||+..+.+|.+...+ ...++|...++. .+|++
T Consensus 1 ~DP~-vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~y 69 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKF 69 (279)
T ss_pred CCCE-EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEE
Confidence 3897 788899999987531 36789999999999999888643322 246899999864 68999
Q ss_pred EEEEcccCCC-CcceEEEEEecCCCCCCc-ceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeE
Q 008224 204 VMLYTGSTDK-SVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (573)
Q Consensus 204 ~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L-~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ 281 (573)
+|+|+..... ..+.+++|++++...|.- ..|++ ..+|+..... ....-.||.+++ ++||++||+.|+.. .|
T Consensus 70 ylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~g- 142 (279)
T cd08988 70 YLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--GG- 142 (279)
T ss_pred EEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEecccC--CC-
Confidence 9999986432 346778999987643310 12443 2466543211 112347999955 57899999998632 23
Q ss_pred EEEEE-eCCCCCcEEcccc---cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 282 SLVYQ-TTDFKTYELLDEY---LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 282 illY~-S~Dl~~W~~~~~l---~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+.+.+ +.|...-...+.. .......+.-|-|-+++-+ .+++|..|..
T Consensus 143 i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~---------------g~YYl~~S~g 193 (279)
T cd08988 143 IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG---------------DYYYLFVSFG 193 (279)
T ss_pred EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC---------------CeEEEEEEcC
Confidence 22222 4454432111111 1111112356888887763 2677777653
No 33
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.89 E-value=1.3e-07 Score=96.97 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=87.7
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~dG 201 (573)
+..-||. +++++|.|+||+.-... .-.....+|+||+||+..+.++...... ...++|...++ ..+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLS-YYDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEE-EECC
Confidence 5567998 88899999999853211 1124568999999999988776542211 24579999985 4799
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
+++|+|+.........+.+|++++.. -.|+. |+... ..-.||.+++ ++||+.||+.|+
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCCCEEEEecC
Confidence 99999998644334567889887653 34653 44322 1347999954 579999999875
No 34
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.82 E-value=2.5e-07 Score=95.17 Aligned_cols=188 Identities=14% Similarity=0.090 Sum_probs=114.5
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec--cCCC-CcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQ-WYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL--~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
||. ++.+++.|+||+.-.. .....++|+||+||+.....+ .+.. .....++|...+. ..+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELH-YIDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEE-EECCEEEEEEE
Confidence 897 7788999999986321 346789999999999865332 2322 1345689999986 46999999999
Q ss_pred ccCC--CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC---CeeEEE
Q 008224 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---KTGISL 283 (573)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~---~~G~il 283 (573)
.... ...+.+.+|.+++..++ +..|+.. .+++... + ..--||.++ .+ +|++||+.+.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEE
Confidence 8754 23456677887753223 4679874 2443211 1 123599994 43 5999999875421 122344
Q ss_pred EEEeCCCCCcEEcccc--cccCC----C--CCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEEE
Q 008224 284 VYQTTDFKTYELLDEY--LHAVP----G--TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT 354 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~----~--~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG~ 354 (573)
+.+..+...+. ++. +.... . .+.-|-|.+++.+ .+++|..|........|.+|-
T Consensus 144 ~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~---------------G~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 144 IAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN---------------GKVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC---------------CEEEEEEECCCCCCCCCEEEE
Confidence 45554433332 221 11110 1 1345778777774 267788876554344566653
No 35
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=98.80 E-value=3.5e-07 Score=93.69 Aligned_cols=169 Identities=15% Similarity=0.097 Sum_probs=108.1
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-----------cCCCcEEeeeEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-----------YDINGVWTGSAT 196 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~-----------yD~~Gv~SGSav 196 (573)
++.-||. +++++|+|++|....- + ...+...+|+||+||+..+.++..... --..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~----~-~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMH----Y-SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCcc----c-CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 4557998 7888999999986421 1 113467889999999999877643211 113579999986
Q ss_pred EccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec
Q 008224 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~ 276 (573)
. .+|+++|+|+.. .+.+.+|++++.. -.|+.. .++. ...||.+++ ++||+.||+.++.
T Consensus 83 ~-~~gkyy~yys~~----~~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTN----TGGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEec----CCCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceEE-cCCCCEEEEeCCC-
Confidence 4 599999999986 2346788887642 457543 1211 457999955 5789999998753
Q ss_pred CCeeEEEEEE-eCCCCCcEEcc-cccccCC-CCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 277 GKTGISLVYQ-TTDFKTYELLD-EYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 277 ~~~G~illY~-S~Dl~~W~~~~-~l~~~~~-~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+ +.+.+ +.|+....-.. .++.... ..+.-|-|.+++-+ .+++|..|..
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------G~YYl~~S~~ 191 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN---------------GYYYIFNIAW 191 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC---------------CEEEEEEecC
Confidence 2 22333 56766552111 1221111 12367999888753 2677777754
No 36
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.80 E-value=5.1e-07 Score=97.58 Aligned_cols=192 Identities=20% Similarity=0.174 Sum_probs=120.5
Q ss_pred cCCccee-EECCEEEEEEeeCCCC----CCCCCcEEEEEEecCcc----CeeecceeccCCCCc-CCCcEEeeeEEEcc-
Q 008224 131 NDPNGPL-FYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLI----HWLYLPIAMVPDQWY-DINGVWTGSATILP- 199 (573)
Q Consensus 131 NDPNG~~-y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLV----hW~~lp~AL~Pd~~y-D~~Gv~SGSavv~~- 199 (573)
-|+.|-+ -++|+.-+|-.--|.. ..|+.-+.++.-|++.. +|++.+.++.....+ ...--|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 4555644 4699777777765543 24567899999999999 999999876554431 23467999999887
Q ss_pred CCeEEEEEcccCC----CCcceE-----EEEEecCCCCCCcceEEEeCCCceecCCCCCC--------CCCCCCCeeEee
Q 008224 200 DGQIVMLYTGSTD----KSVQVQ-----NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG--------PKDFRDPTTAWA 262 (573)
Q Consensus 200 dG~~~~~YTG~~~----~~~q~q-----~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~--------~~~fRDP~V~w~ 262 (573)
||++.||||.... ...|.. +++...+ ....+..|.++ ..++. +.|.. ...||||++ +.
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~-~~v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~-f~ 217 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADD-DGVWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHV-FE 217 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECS-TEEEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEE-EE
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCC-CceeEccccce--eEeec-cchhhhhChhhcCCccccCCee-EE
Confidence 8999999998542 222322 1223222 12234455554 34554 43321 267999999 55
Q ss_pred c-CCCcEEEEEeeec-------------------------C--------CeeEEEEEEeCC--CCCcEEcccccccCCCC
Q 008224 263 G-PDGKWRLTIGSKI-------------------------G--------KTGISLVYQTTD--FKTYELLDEYLHAVPGT 306 (573)
Q Consensus 263 ~-~dG~w~MvvGs~~-------------------------~--------~~G~illY~S~D--l~~W~~~~~l~~~~~~~ 306 (573)
+ .+|+-||+.-+.. . ..|+|.|.+.+| +..|++.++|+.+..-.
T Consensus 218 DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~ 297 (428)
T PF02435_consen 218 DPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVN 297 (428)
T ss_dssp ETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTB
T ss_pred CCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccc
Confidence 4 6888888874320 0 257777777644 56899999999875545
Q ss_pred CceeeecEEEecccCcccceeccCCCCeEEEEEeee
Q 008224 307 GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL 342 (573)
Q Consensus 307 GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~ 342 (573)
...|=|+++.++ .||+|+.+.
T Consensus 298 de~ERP~iv~~~---------------gkyYLFt~s 318 (428)
T PF02435_consen 298 DELERPHIVFMN---------------GKYYLFTIS 318 (428)
T ss_dssp S-EEEEEEEEET---------------TEEEEEEEE
T ss_pred ccccCCcEEEEC---------------CEEEEEEEe
Confidence 589999999996 278887654
No 37
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.79 E-value=3.5e-08 Score=100.54 Aligned_cols=98 Identities=23% Similarity=0.344 Sum_probs=75.0
Q ss_pred eEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC--CCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 194 SATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 194 Savv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
.++ ..||+++||||+........+++|+|+|+ .+|++.+ +|++.++ ...+...++||.|+ + .+|+|+|+
T Consensus 4 ~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m~ 74 (268)
T cd08993 4 AVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYIT 74 (268)
T ss_pred eEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEEE
Confidence 444 47999999999876555678999999995 8999975 5655442 23456778999995 3 58899999
Q ss_pred Eeeec--CCeeEEEEEEeCCCCCcEEccccc
Q 008224 272 IGSKI--GKTGISLVYQTTDFKTYELLDEYL 300 (573)
Q Consensus 272 vGs~~--~~~G~illY~S~Dl~~W~~~~~l~ 300 (573)
+++.. .....+.+++|+|+.+|++.+..+
T Consensus 75 Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~~ 105 (268)
T cd08993 75 YAARPNAPNGTRIGLATTKDFITFERLGTSL 105 (268)
T ss_pred EEccCCCCCCcEEEEEEeCCcceEEEecccC
Confidence 98864 344578899999999999986543
No 38
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.76 E-value=3.5e-07 Score=93.75 Aligned_cols=130 Identities=20% Similarity=0.185 Sum_probs=87.3
Q ss_pred cccCCcceeEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEecCccCeeecceeccCCCC------------cCCCcE
Q 008224 129 WMNDPNGPLFY-KGWYHLFYQYNPDSA----VW-GNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGV 190 (573)
Q Consensus 129 WmNDPNG~~y~-~G~YHLFYQ~nP~~~----~w-G~~~WGHAvS~DLVhW~~lp~AL~Pd~~------------yD~~Gv 190 (573)
||-||. ++.. +|.|+|+..-.-.+. .| ..-..-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 789998 6655 679999987542221 01 1234568999999999999887754321 235679
Q ss_pred EeeeEEEccCCeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCC-ceecCCCCCCCCCCCCCeeEeecCCCcE
Q 008224 191 WTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGN-PVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (573)
Q Consensus 191 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~n-PVl~~p~g~~~~~fRDP~V~w~~~dG~w 268 (573)
|...+.. .+|+++|+|+..... ....+.+|++.+.. ..|+....+ ++ ..-.||.++ .+.||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCE
Confidence 9888864 689999999976432 23456778776543 467765322 11 124699994 4678999
Q ss_pred EEEEee
Q 008224 269 RLTIGS 274 (573)
Q Consensus 269 ~MvvGs 274 (573)
||+.++
T Consensus 145 Yl~~~~ 150 (269)
T cd08986 145 YLVWHN 150 (269)
T ss_pred EEEeeC
Confidence 999875
No 39
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.63 E-value=2.7e-07 Score=94.86 Aligned_cols=108 Identities=25% Similarity=0.328 Sum_probs=81.4
Q ss_pred cCCcceeEECCEEEEEEeeCCCC----CCCCCcEEEEEEecC-ccCeee-cceeccCCC-CcCCCcEEeeeEEEccCCeE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSAD-LIHWLY-LPIAMVPDQ-WYDINGVWTGSATILPDGQI 203 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~D-LVhW~~-lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~ 203 (573)
-+|. +++++|+|+|||..+... ...++...|.|+|+| +-+|+. ..++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 3675 677899999999976431 122356899999999 469998 456676654 36788899999986558999
Q ss_pred EEEEcccCCC---CcceEEEEEecCCCCCCcceEEEeCCCcee
Q 008224 204 VMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243 (573)
Q Consensus 204 ~~~YTG~~~~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl 243 (573)
+|+|+|.... ..+.|++|+|.|.. ..|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998632 35778999998852 579998766764
No 40
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.62 E-value=4.1e-07 Score=93.85 Aligned_cols=122 Identities=18% Similarity=0.205 Sum_probs=85.5
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
+..-||. +++.+|+|+|+..-.. + .....-.+|+||+||+..+.++.+. ..++|...+. ..+|+++|+|
T Consensus 13 ~~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yy 81 (280)
T cd09002 13 GDYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYF 81 (280)
T ss_pred CCCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEE
Confidence 3445996 8889999999764211 1 1246778899999999988877542 4579998875 5899999999
Q ss_pred cccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 208 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 208 TG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
+.......+.+.+|++.+.. ..|++ |+... ....-||.+++ +.+|++||+.+.
T Consensus 82 s~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 82 PAIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred EeecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 98754445667889886653 45754 22111 11235999965 578999999864
No 41
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.59 E-value=2.5e-06 Score=88.84 Aligned_cols=109 Identities=26% Similarity=0.416 Sum_probs=74.6
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcc
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 209 (573)
.-||. +++++|+|+||-... + +..+|+||+||+..+.++. ..++|..++.. .+|+++++|+.
T Consensus 3 ~~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 3 AADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 36997 778899999886542 1 3678999999999987753 46799999864 68987766654
Q ss_pred cCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 210 ~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
. .+.+|++.|+. .-.|... .+. ......||.+++ +.||++||+.|+.
T Consensus 65 ~------~~~v~~s~~p~---gp~w~~~--~~~-------~~~~~IDp~vf~-DdDGk~Yl~~g~~ 111 (295)
T cd08982 65 Y------NSRIYKTADPL---SGPWEEV--DKS-------FPPGLADPALFI-DDDGRLYLYYGCS 111 (295)
T ss_pred C------CceEEEeCCCC---CCCcccc--ccc-------cCCCccCCceEE-CCCCCEEEEEecC
Confidence 2 13577776642 2236542 010 112356999954 5789999999753
No 42
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.55 E-value=4.2e-06 Score=86.59 Aligned_cols=208 Identities=17% Similarity=0.322 Sum_probs=130.4
Q ss_pred cccceeeeecCCCc---ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCC
Q 008224 116 WQRTSFHFQPEKNW---MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDIN 188 (573)
Q Consensus 116 w~Rp~yHf~P~~gW---mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD~~ 188 (573)
|--+.--.+|..|| +-||- +++++|+||+|-..+-. . .|+-+-+. |+||+.++.|+. +.. ...
T Consensus 7 w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-~-----~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~ 76 (303)
T cd08987 7 WTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-G-----NYGSMYFN-FTDWSQAASATQYYLQNGN--MTG 76 (303)
T ss_pred eccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-C-----Cceeeeec-ccCHhHhccchhhcccCCC--CCc
Confidence 33333445788899 79997 67889999999875431 1 24333333 999998887652 221 234
Q ss_pred cEEeeeEE-EccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCc
Q 008224 189 GVWTGSAT-ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK 267 (573)
Q Consensus 189 Gv~SGSav-v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~ 267 (573)
+.|...++ ..+++++||+|+-. ..+.|++.|..+| ..|... .|++...........-|++|+ .++++
T Consensus 77 ~fwAPqVfyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~vI--~Dd~~ 144 (303)
T cd08987 77 YRVAPQVFYFAPQNKWYLIYQWW------PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWVI--CDDTN 144 (303)
T ss_pred ccccCEEeeeccCCEEEEEEecC------ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeEE--eCCCC
Confidence 67888875 25789999999951 2468999998877 467764 567653222233456899994 46888
Q ss_pred EEEEEeeecCCeeEEEEEEeC-C---CCC--cEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEee
Q 008224 268 WRLTIGSKIGKTGISLVYQTT-D---FKT--YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKAS 341 (573)
Q Consensus 268 w~MvvGs~~~~~G~illY~S~-D---l~~--W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S 341 (573)
.||+... ..| -+|+|+ . |-+ .+.. .+........+.|-|+.+.+.. ..+++|.++
T Consensus 145 ~YLff~~---dnG--~iyra~~~~~nFp~~~~~~~-~~~~~~~~~~lfEa~~Vykv~G-------------~~~Ylmive 205 (303)
T cd08987 145 CYLFFSD---DNG--KLYRSSTTLGNFPNGGTETV-IIMSDSNKNNLFEASNVYKVKG-------------QNQYLLIVE 205 (303)
T ss_pred EEEEEec---CCC--eEEEEecchhhCCCCCCccE-EEecCCCccccceeeEEEEECC-------------CeEEEEEEE
Confidence 8888743 234 367762 2 322 1111 1111111124799999999962 237888888
Q ss_pred eCCCcceEEEEEEe--cCCCCcccCC
Q 008224 342 LDDTKVDHYAIGTY--NPANDKWTPD 365 (573)
Q Consensus 342 ~~~~~~~~Y~iG~~--d~~~~~f~pd 365 (573)
..+..+..|+++ + +--.+.|+|.
T Consensus 206 A~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 206 AIGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred ecCCCCCCeEEE-EEcCCCCCCceec
Confidence 877644457777 3 2234677764
No 43
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.51 E-value=2.2e-06 Score=87.63 Aligned_cols=151 Identities=19% Similarity=0.161 Sum_probs=95.1
Q ss_pred ccccccccceeeeecCCCc-----ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc--eeccCCC
Q 008224 111 NAMFTWQRTSFHFQPEKNW-----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP--IAMVPDQ 183 (573)
Q Consensus 111 ~~~~~w~Rp~yHf~P~~gW-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp--~AL~Pd~ 183 (573)
..+..|++-.--+.|+.++ +-.|+ +++.+|+|||||.-+... .......++|+|+|+++|+..+ +.+.+..
T Consensus 38 ~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~ 115 (280)
T cd08995 38 KDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGE 115 (280)
T ss_pred cCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCcc
Confidence 3456676655555553322 23344 566789999999865322 1124568999999999999865 3343233
Q ss_pred CcCCCcEEeeeEEEcc-CCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCe
Q 008224 184 WYDINGVWTGSATILP-DGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (573)
Q Consensus 184 ~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~ 258 (573)
.++...+-...++.++ +|+++|+|.+... ...-.+.++.|+| |++|+.. .+++.+.. ...+=-|.
T Consensus 116 ~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~---~~~~E~P~ 185 (280)
T cd08995 116 GYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGL---YFMPECPD 185 (280)
T ss_pred ccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCC---cceeecce
Confidence 3444444566766543 6999999987543 2334566788877 4899875 45553321 12345677
Q ss_pred eEeecCCCcEEEEEeee
Q 008224 259 TAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 259 V~w~~~dG~w~MvvGs~ 275 (573)
+ ++ -+|+|+|+++..
T Consensus 186 l-~~-~~g~~~L~~s~~ 200 (280)
T cd08995 186 L-FK-MGDWWYLVYSEF 200 (280)
T ss_pred E-EE-ECCEEEEEEEec
Confidence 7 43 579999999865
No 44
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.46 E-value=1.6e-06 Score=89.58 Aligned_cols=147 Identities=22% Similarity=0.285 Sum_probs=109.5
Q ss_pred ceeEECCEEEEEEee------CCCCCCCCCcEEEEEEecCccC-eeecc-eeccC-CCCcCCCcEEeeeEEEccCCeEEE
Q 008224 135 GPLFYKGWYHLFYQY------NPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVP-DQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 135 G~~y~~G~YHLFYQ~------nP~~~~wG~~~WGHAvS~DLVh-W~~lp-~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
|+++.++++||+|+- .+. .-.|.+-|.|+|.++ |+-.+ +.+.| ..+++.-||....++. .||+++|
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~m 109 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYM 109 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEE
Confidence 578899999999986 222 346788999999999 98665 67888 5578889999999974 6899999
Q ss_pred EEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-C--CeeEE
Q 008224 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G--KTGIS 282 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~--~~G~i 282 (573)
.|||.+. ..+..++|+++|. .+|+|.+ +++ +| ++||-.++=...+|+|.|+---.. + ..+-+
T Consensus 110 tYTa~s~-~g~~~~la~t~~f-----~n~~rig--~i~-~p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ni 174 (314)
T COG2152 110 TYTAYSD-KGPRLALAVTKDF-----LNWERIG--AIF-PP------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNI 174 (314)
T ss_pred EEEecCC-CCcccchhhhhhh-----hhhhhcc--ccc-CC------CCCCceEeeEEecCcEEEEEeecccccCccCce
Confidence 9999854 4577899999985 7899963 333 22 456655421235789998864322 1 14668
Q ss_pred EEEEeCCCCCcEEcccccc
Q 008224 283 LVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 283 llY~S~Dl~~W~~~~~l~~ 301 (573)
.+..|.|+.+|.....++.
T Consensus 175 wia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 175 WIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred EEEEcCCccCCCccceeec
Confidence 8999999999987755553
No 45
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.46 E-value=5e-06 Score=83.33 Aligned_cols=156 Identities=17% Similarity=0.138 Sum_probs=96.2
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
.+-+-+|. +++++|+|+|||..+..+ ......+.|+|+|+.+|........+ .....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~--~~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP--TSNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC--ccCCCCccCcceEEcCCCCEEEE
Confidence 45677887 889999999999987542 23456899999999999765321111 11344678899988777999999
Q ss_pred EcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC--CeeEEE
Q 008224 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISL 283 (573)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--~~G~il 283 (573)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ ++ .+|+|||++.+... ..-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEE
Confidence 9876421 1334566666553 22222 123321111111223457888 44 57999999876522 223466
Q ss_pred EEEeCCCC-CcEEc
Q 008224 284 VYQTTDFK-TYELL 296 (573)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (573)
+.+|++.. -|+..
T Consensus 202 ~~~s~~~~Gp~~~~ 215 (271)
T cd08978 202 YATSDSIDGPYVKK 215 (271)
T ss_pred EEECCCCCCCcCcC
Confidence 77887763 35543
No 46
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.41 E-value=6.4e-06 Score=84.16 Aligned_cols=153 Identities=16% Similarity=0.136 Sum_probs=93.5
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeeccee-cc-CCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MV-PDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~A-L~-Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
-.|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+.. +. +. +..+....++++++||+++|+|
T Consensus 63 waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~---~~~~~~Dp~v~~d~dG~~Yl~~ 136 (287)
T cd08999 63 WAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPE---GEGGAIDPSFFTDTDGKRYLVW 136 (287)
T ss_pred cCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCC---CCCCccCCCeEECCCCCEEEEE
Confidence 3454 778899999999876433 235678999999965 89876532 22 22 2345677888877799999999
Q ss_pred cccCCC--CcceEEEE-EecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec--CC--ee
Q 008224 208 TGSTDK--SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GK--TG 280 (573)
Q Consensus 208 TG~~~~--~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~--~~--~G 280 (573)
.+.... ..+.+.++ .+.| +.+|+... ..++.+........+=-|.+ ++ .+|+|||++.+.. .. .=
T Consensus 137 ~~~~~~~~~~~~i~~~~ls~d-----~~~~~~~~-~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y 208 (287)
T cd08999 137 KSDGNSIGKPTPIYLQELSAD-----GLTLTGEP-VRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTY 208 (287)
T ss_pred eccCCCCCCCceEEEEEeCCC-----CccccCCc-EeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCE
Confidence 764322 12224444 4444 35665421 22333221222223446887 44 5899999997642 11 22
Q ss_pred EEEEEEeCCCC-CcEEcc
Q 008224 281 ISLVYQTTDFK-TYELLD 297 (573)
Q Consensus 281 ~illY~S~Dl~-~W~~~~ 297 (573)
.+.+++|+|+. .|+...
T Consensus 209 ~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 209 AVGVARSKSLLGPYVKAP 226 (287)
T ss_pred EEEEEEeCCCcCCcCCCC
Confidence 45678999976 787654
No 47
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.38 E-value=2.5e-06 Score=87.93 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=62.9
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CCeeEEEEEEeCCCCCcEEcccccccCCCC-Cceee
Q 008224 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGT-GMWEC 311 (573)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~~G~illY~S~Dl~~W~~~~~l~~~~~~~-GmWEC 311 (573)
.++|||.+.. +...+|||+|++...+|+|||+..... .....+.+|+|+||++|+..+.++...+.. .+| +
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 4689998643 458899999976446889999876532 112257799999999999987765332333 378 9
Q ss_pred ecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 312 VDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 312 Pd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
|++|....+ .+|+|..+..
T Consensus 81 Pev~~d~~~-------------g~y~~~~s~~ 99 (276)
T cd08983 81 PEAFWDAER-------------GQYVVYWSSR 99 (276)
T ss_pred ccceEcCCC-------------CeEEEEEecc
Confidence 999987532 2677766654
No 48
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.32 E-value=6.1e-06 Score=84.65 Aligned_cols=120 Identities=15% Similarity=0.165 Sum_probs=71.0
Q ss_pred CCCCeeEeecCCCcEEEEEeeecC---------CeeEEEEEEeCCCCCcEEcccccccCC---------------CCCce
Q 008224 254 FRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP---------------GTGMW 309 (573)
Q Consensus 254 fRDP~V~w~~~dG~w~MvvGs~~~---------~~G~illY~S~Dl~~W~~~~~l~~~~~---------------~~GmW 309 (573)
||||+|+ +..+|.|||+..+... ..+.+.+|+|+||++|+..+.++...+ ..++|
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999994 4567889988765421 123477999999999999887764321 12355
Q ss_pred eeecEEEecccCcccceeccCCCCeEEEEEeeeCCC--cceEEEEEEecCCCCcccCCCCCcccccceeeccCCCcccce
Q 008224 310 ECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKS 387 (573)
Q Consensus 310 ECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~--~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G~fYAs~t 387 (573)
||+++.+. .|++|..+.... ......+.+=|...+.|+..... + .+. .-.-+..
T Consensus 81 -AP~v~~~~---------------g~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~ 136 (269)
T cd08986 81 -APELHYIK---------------GRWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSL 136 (269)
T ss_pred -CceEEEEC---------------CEEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCce
Confidence 99999885 277777765431 12223333333334556532110 0 001 1233677
Q ss_pred eecCCCCcEEEE
Q 008224 388 FYDPYKKRRIVW 399 (573)
Q Consensus 388 f~d~~~~RrIl~ 399 (573)
|.|. +|+..|+
T Consensus 137 f~D~-DG~~Yl~ 147 (269)
T cd08986 137 FEDD-DGKVYLV 147 (269)
T ss_pred EEcC-CCCEEEE
Confidence 8885 5776655
No 49
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.31 E-value=1.8e-05 Score=79.63 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=98.1
Q ss_pred CcccCCcceeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccC-eeecc-eeccCCC--CcCCCcEEeeeEEEccCCe
Q 008224 128 NWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVPDQ--WYDINGVWTGSATILPDGQ 202 (573)
Q Consensus 128 gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVh-W~~lp-~AL~Pd~--~yD~~Gv~SGSavv~~dG~ 202 (573)
+-+-.|. +++.+ |+|+|||..... ..+....+.|+|+|+.. |+... ..+.+.. ..+...+..++++.++||+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 3455676 66777 999999987543 22356789999999976 45432 1122221 2234467888988776799
Q ss_pred EEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec----CC
Q 008224 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GK 278 (573)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~----~~ 278 (573)
++|+|.+........+.+|.++|. .+|++.+..+++.... ....+--|.++ + .+|+|||++.+.. +.
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCC
Confidence 999998865434466789999885 6888754222222211 22345679884 3 5799999998653 12
Q ss_pred eeEEEEEEeCC-CCCcEEc
Q 008224 279 TGISLVYQTTD-FKTYELL 296 (573)
Q Consensus 279 ~G~illY~S~D-l~~W~~~ 296 (573)
.-.+..++|++ +-.|+..
T Consensus 206 ~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 206 TYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CcceEEEEccCCCCCcccC
Confidence 22345566654 3445543
No 50
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.25 E-value=3.5e-05 Score=79.33 Aligned_cols=154 Identities=15% Similarity=0.145 Sum_probs=89.3
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
.+-.|. +++.+|+|||||..+... -.....++|+|+|.. .|+..+..+.+.. .....++++.++||+++|+|
T Consensus 54 ~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~ 126 (294)
T cd08991 54 GFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYY 126 (294)
T ss_pred cEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEE
Confidence 344676 788999999999876432 134678999999977 6877653333321 34567888888789999999
Q ss_pred cccCCCC--cceEEEEEecCCCCCCcceEEEeCC---CceecC-------CCC----CCCCCCCCCeeEeecCCCcEEEE
Q 008224 208 TGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPG---NPVLVP-------PRH----IGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 208 TG~~~~~--~q~q~lA~S~D~~Dp~L~~W~K~~~---nPVl~~-------p~g----~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
+...... ...+..+.+.|. .+|..... .|+..+ +.. .+..-.=-|.+ .+ .+|+|||+
T Consensus 127 ~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ 199 (294)
T cd08991 127 SRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYLT 199 (294)
T ss_pred EecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEEE
Confidence 8754322 233444566553 45542111 122111 000 00011224666 33 57899999
Q ss_pred Eeeec-CCee-EEEEEEeCC-CCCcEEc
Q 008224 272 IGSKI-GKTG-ISLVYQTTD-FKTYELL 296 (573)
Q Consensus 272 vGs~~-~~~G-~illY~S~D-l~~W~~~ 296 (573)
..+.. .... .+.+.+|++ +-.|+..
T Consensus 200 ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 200 YSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 87532 1111 344567776 4578764
No 51
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.20 E-value=3.9e-05 Score=78.40 Aligned_cols=151 Identities=15% Similarity=0.064 Sum_probs=91.9
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeeccee-ccCCCCcCCCcEEeeeEEEccCCeEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MVPDQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~A-L~Pd~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
+-+--|. +++++|+|||||..... .+....|+|+|+|.. .|+..... +.+ ...+.......++++++||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 4455676 78899999999987643 234678999999976 79987532 322 22233456688888877899999
Q ss_pred EEcccCCCCcceEEEE-EecCCCCCCcceEEEeCCCceecCCC---CCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeE
Q 008224 206 LYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ 281 (573)
+|.+. +.+.+| .+.| +.+|+.. ..++..+. .....-+=-|.+ ++ .+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcE
Confidence 99864 233444 3334 3667542 12232111 001111235777 44 6899999997642 334
Q ss_pred EEEEEeCCCC-CcEEcccc
Q 008224 282 SLVYQTTDFK-TYELLDEY 299 (573)
Q Consensus 282 illY~S~Dl~-~W~~~~~l 299 (573)
+.+.+|+++. -|+..+.+
T Consensus 201 ~~~a~s~~p~GP~~~~g~~ 219 (274)
T cd08990 201 IAYATSDSPLGPFTYRGVI 219 (274)
T ss_pred EEEEEcCCCCCCcccCcEE
Confidence 5555777764 46554443
No 52
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.14 E-value=9e-06 Score=85.58 Aligned_cols=108 Identities=20% Similarity=0.295 Sum_probs=79.6
Q ss_pred CCCcEEeeeEEEccCC-eEEEEEcccCCCCcc-eEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeec
Q 008224 186 DINGVWTGSATILPDG-QIVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 263 (573)
Q Consensus 186 D~~Gv~SGSavv~~dG-~~~~~YTG~~~~~~q-~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~ 263 (573)
....||-..|++..++ +++|+|.+....... .+.+|.|.|+ .+|++. ..||+.|...++....-||-|...
T Consensus 28 ~~~~vfNpgai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 28 EPNAVFNPGAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp TSSEEEEEEEEEETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred CcceEEcCcEEEECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 3567999998764444 289999887655444 7899999996 899886 479998765555556779999653
Q ss_pred CCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccc
Q 008224 264 PDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 264 ~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~ 301 (573)
+++|+|++.+.......+.+.+|+||.+|+..+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 6799999988755555677889999999999987654
No 53
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.10 E-value=0.00014 Score=74.89 Aligned_cols=152 Identities=17% Similarity=0.152 Sum_probs=89.4
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL--VhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
-+-.|. +++.+|+|||||..+..+. ++...++|+|+|+ -.|+..++.+.+...+.......+++++++||+++|+
T Consensus 57 ~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~ 133 (288)
T cd08998 57 NLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLS 133 (288)
T ss_pred CccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEE
Confidence 345565 6788999999998764321 2456799999998 7999887666654332344577889888779999999
Q ss_pred EcccCCCCcceEEEEE-ecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-C---Cee-
Q 008224 207 YTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G---KTG- 280 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~-S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~---~~G- 280 (573)
|.+... .+.+|. ..|.+.+ ..|... ...++..+.. ..-.=.|++ ++ .+|+|||++.+.. . ..+
T Consensus 134 ~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y 202 (288)
T cd08998 134 FGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTY 202 (288)
T ss_pred eeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCce
Confidence 975421 122332 2232221 222110 0012211111 112237888 44 6899999986431 1 122
Q ss_pred EEEEEEeCCCC-CcE
Q 008224 281 ISLVYQTTDFK-TYE 294 (573)
Q Consensus 281 ~illY~S~Dl~-~W~ 294 (573)
.+.+++|+++. -|+
T Consensus 203 ~v~~~~s~~~~GP~~ 217 (288)
T cd08998 203 NIRVGRSKSITGPYV 217 (288)
T ss_pred EEEEEEcCCCCCCcC
Confidence 46688898753 354
No 54
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.06 E-value=4.2e-05 Score=78.90 Aligned_cols=152 Identities=18% Similarity=0.180 Sum_probs=94.6
Q ss_pred cccccccccceeeeecCCCcccCCcc-----eeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEec-CccCeeecce--ecc
Q 008224 110 TNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSA-DLIHWLYLPI--AMV 180 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gWmNDPNG-----~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~-DLVhW~~lp~--AL~ 180 (573)
+..+..|++..-=+.|... .|.+| .+..+ |+|+|||.-+......+...-++|+|+ |+++|+..+. .+.
T Consensus 39 S~Dlv~W~~~~~al~p~~~--~d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~ 116 (298)
T cd08996 39 SKDLVHWEHLPVALAPDDP--YDSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIP 116 (298)
T ss_pred ecCccceeECCcccCCCCc--ccCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEc
Confidence 3345667654433444222 23333 34456 999999986543211234667899999 8999998753 222
Q ss_pred CCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE
Q 008224 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (573)
Q Consensus 181 Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (573)
| ...+..+.-...++. .+|+++|+|++...+....+.++.|+|+ ++|++.. ++.... +.....+=-|.+
T Consensus 117 ~-~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~~--~~~~~~-~~~~~~~EcP~l- 185 (298)
T cd08996 117 P-PDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYLG--ELLTSL-GDFGYMWECPDL- 185 (298)
T ss_pred C-CCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEcc--eecccC-CCccceEeCCcE-
Confidence 2 222345566777764 5699999999876544566788999884 8999853 442211 112234567887
Q ss_pred eecCC--CcEEEEEeee
Q 008224 261 WAGPD--GKWRLTIGSK 275 (573)
Q Consensus 261 w~~~d--G~w~MvvGs~ 275 (573)
++ -+ ++|+|+++..
T Consensus 186 ~~-l~~~~k~vL~~s~~ 201 (298)
T cd08996 186 FP-LDVEGKWVLIFSPQ 201 (298)
T ss_pred EE-ECCCCeEEEEECCC
Confidence 43 45 9999999865
No 55
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=97.91 E-value=0.00016 Score=74.25 Aligned_cols=78 Identities=19% Similarity=0.234 Sum_probs=55.5
Q ss_pred CceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccC---------CCCCcee
Q 008224 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 310 (573)
Q Consensus 240 nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~---------~~~GmWE 310 (573)
||||. .++.||+|+. .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67873 3678999953 47899999765322234 6689999999999988776431 123588
Q ss_pred eecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 311 CVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 311 CPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+|+++... .||+|-.+..
T Consensus 70 AP~v~~~~---------------G~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD---------------GKFWLIYTAV 87 (269)
T ss_pred cceEEEEC---------------CEEEEEEecc
Confidence 99998874 2777777654
No 56
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.90 E-value=0.00015 Score=75.48 Aligned_cols=78 Identities=14% Similarity=0.064 Sum_probs=53.8
Q ss_pred CCCCCCeeEeecCCCcEEEEEeeecCC----eeEEEEEEeCCCCCcEEcccccccCC---CCCceeeecEEEecccCccc
Q 008224 252 KDFRDPTTAWAGPDGKWRLTIGSKIGK----TGISLVYQTTDFKTYELLDEYLHAVP---GTGMWECVDFYPVAINGSVG 324 (573)
Q Consensus 252 ~~fRDP~V~w~~~dG~w~MvvGs~~~~----~G~illY~S~Dl~~W~~~~~l~~~~~---~~GmWECPd~f~l~~~~~~g 324 (573)
..+|||+|++...+|+|||+..+.... ...+-+|+|+||++|+..+.++.... ......+|+++...
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~------ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK------ 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC------
Confidence 468999997655689999998764211 12367999999999999888774322 12234589988764
Q ss_pred ceeccCCCCeEEEEEeeeCC
Q 008224 325 LDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 325 l~~s~~g~~~k~VL~~S~~~ 344 (573)
.||+|..+...
T Consensus 78 ---------G~yyly~s~~~ 88 (291)
T cd08981 78 ---------GRYYMFATFHN 88 (291)
T ss_pred ---------CEEEEEEEecc
Confidence 27877776543
No 57
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=97.89 E-value=0.00019 Score=74.15 Aligned_cols=78 Identities=17% Similarity=0.241 Sum_probs=55.3
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEec
Q 008224 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (573)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~ 318 (573)
.||||. .++.||.|++ .+++|||+.++. +..+.+.+|+|+||.+|+..+..+... ..++| +|+++...
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~-~~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSF-KYTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcch-hcCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 488875 2568999954 478999976532 222346799999999999988766432 23589 89998764
Q ss_pred ccCcccceeccCCCCeEEEEEeeeC
Q 008224 319 INGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 319 ~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
.|++|-.+..
T Consensus 75 ---------------gkyy~yys~~ 84 (280)
T cd09002 75 ---------------GRYYIYFPAI 84 (280)
T ss_pred ---------------CEEEEEEEee
Confidence 2777777764
No 58
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.70 E-value=0.0005 Score=75.70 Aligned_cols=153 Identities=14% Similarity=0.149 Sum_probs=88.9
Q ss_pred cccccccceeeeecCCCc----ccCCcceeEECCEEEEEEeeCCCCCCCC-CcEEEEEEecCccCeeecc-eeccCCCCc
Q 008224 112 AMFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP-IAMVPDQWY 185 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHAvS~DLVhW~~lp-~AL~Pd~~y 185 (573)
.+..|++-.-=+.|..-| +-.++ .+..+|++||||.-+.....+. ...-++|+|+|+.+|+..+ +.|.+....
T Consensus 64 Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~ 142 (445)
T TIGR01322 64 DLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAG 142 (445)
T ss_pred CccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCC
Confidence 366776533333443322 12333 3457999999999764322232 2234689999999999876 455543221
Q ss_pred CCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCC---CCCCCCCCCCeeEee
Q 008224 186 DINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWA 262 (573)
Q Consensus 186 D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~---g~~~~~fRDP~V~w~ 262 (573)
...+.-...++ ..+|+++|+|.+..........+..|+| |++|+.. .++..+.. +.....|=-|-+ +.
T Consensus 143 ~~~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~ 213 (445)
T TIGR01322 143 YTAHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS 213 (445)
T ss_pred CcCcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-EE
Confidence 12233355554 4689999999876443323346777777 5899986 34443321 111123456766 33
Q ss_pred cCCCcEEEEEeee
Q 008224 263 GPDGKWRLTIGSK 275 (573)
Q Consensus 263 ~~dG~w~MvvGs~ 275 (573)
-+|+|+|+++..
T Consensus 214 -l~~k~vL~~s~~ 225 (445)
T TIGR01322 214 -LDGQDVLLFSPQ 225 (445)
T ss_pred -ECCcEEEEEecc
Confidence 578999998753
No 59
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.67 E-value=0.00095 Score=71.41 Aligned_cols=148 Identities=17% Similarity=0.175 Sum_probs=90.8
Q ss_pred ECCEEEEEEeeCCCCC---CCCCcEEEEEEecCccCee----ecceeccCCC-CcCCC-------------cEEeeeEEE
Q 008224 139 YKGWYHLFYQYNPDSA---VWGNITWGHAVSADLIHWL----YLPIAMVPDQ-WYDIN-------------GVWTGSATI 197 (573)
Q Consensus 139 ~~G~YHLFYQ~nP~~~---~wG~~~WGHAvS~DLVhW~----~lp~AL~Pd~-~yD~~-------------Gv~SGSavv 197 (573)
.+|+|||||.-+-... .--....++|+++|+..|. .....+.++. .|+.. ..=...++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 3599999999763211 1123678999999985443 3444556655 33211 122445555
Q ss_pred cc-CCeEEEEEcccCCCC---------------------------cceEEEEEecCCCCCCcceEEEeCCCceecCCCCC
Q 008224 198 LP-DGQIVMLYTGSTDKS---------------------------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249 (573)
Q Consensus 198 ~~-dG~~~~~YTG~~~~~---------------------------~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~ 249 (573)
++ +|+.+|++++++... .-+++||.+++. .|.+|+-+ .|++.+. +.
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~-~v 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEAN-GV 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCC-Cc
Confidence 54 699999999986421 134667777643 25789976 4777542 22
Q ss_pred CCCCCCCCeeEeecCCCcEEEEEeeecC-------CeeEEEEEEeCCCC-CcEE
Q 008224 250 GPKDFRDPTTAWAGPDGKWRLTIGSKIG-------KTGISLVYQTTDFK-TYEL 295 (573)
Q Consensus 250 ~~~~fRDP~V~w~~~dG~w~MvvGs~~~-------~~G~illY~S~Dl~-~W~~ 295 (573)
...+-+|.++ + .+|+|||+..++.. +...+..|.|+++. -|+.
T Consensus 234 -~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 2346689994 3 68999999875421 11235567888874 3443
No 60
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.67 E-value=0.00061 Score=69.27 Aligned_cols=142 Identities=20% Similarity=0.272 Sum_probs=94.8
Q ss_pred CCcccCCcceeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEE
Q 008224 127 KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIV 204 (573)
Q Consensus 127 ~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~ 204 (573)
..+.-||. ++.++ |+++|+|-..... ......+....+.|+.++...+ ..+.+.......++.-|..++..+|.++
T Consensus 116 ~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g~yY 193 (286)
T PF04616_consen 116 GGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPGGGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHGGKYY 193 (286)
T ss_dssp SSSSSSEE-EEEETTSEEEEEEEESTTT-SSEEEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEETTEEE
T ss_pred cccccCce-EEEecCCCcEEeCcccCCC-ccceeEEeecccCccccccCcccccccccccccCCccccceEEEEcCCCEE
Confidence 77889997 66665 9999999765443 2234567888899999998877 4455544334567888888888999999
Q ss_pred EEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC-CCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p-~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
|+|.+..........+|+|++. +..|+....+|++... ..-....-.-..+ +..++|+|+|+.=+.
T Consensus 194 l~~s~~~~~~~y~v~~~~s~~~----~gp~~~~~~~~~~~~~~~~~~~~g~gH~~~-~~~~~g~~~~~yh~~ 260 (286)
T PF04616_consen 194 LFYSAGGTGSPYQVGYARSDSP----LGPWEWKKGNPILFSRDGENGVYGPGHGSV-FKDPDGRWYIVYHAR 260 (286)
T ss_dssp EEEEESGSSTTTEEEEEEESST----TSGGEETTTCBCEGTTBTTSSCEEEEEEEE-EEETTSEEEEEEEEE
T ss_pred EEEeccCCCCCceEEEeeccCC----CCceeeccCCeEEEeeccCCccccCccCCE-EECCCCCEEEEEeec
Confidence 9999765443456678999876 3567776667877631 1111111112233 445678888876543
No 61
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.53 E-value=0.0041 Score=64.12 Aligned_cols=144 Identities=15% Similarity=0.158 Sum_probs=79.8
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc------CeeecceeccCCCCcCCCcEEeeeEEEccCCeEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI------HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIV 204 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV------hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~ 204 (573)
.-|. +.|++|+|||||.-+..+. .....|.|+|++.. .|+...+.+.+... +......+++++++||+++
T Consensus 58 WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Y 133 (279)
T cd08988 58 WAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPW 133 (279)
T ss_pred ecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEE
Confidence 3454 6788999999998765432 23567999999853 25543344444332 2234568888888899999
Q ss_pred EEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCC--ceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----C
Q 008224 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN--PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----G 277 (573)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~n--PVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~ 277 (573)
|+|.... .+. +..-.+.|.... . ..+. .++..+. .....--|++ ++ .+|+|||+..+.. +
T Consensus 134 l~~g~~~-~gi--~~~eL~~d~~~~-----~-~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~~ 200 (279)
T cd08988 134 LSFGSFW-GGI--KLFELDKDTMKP-----A-EPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGGD 200 (279)
T ss_pred EEecccC-CCE--EEEEECcccCCc-----c-CCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCCC
Confidence 9996432 111 122233332211 0 0111 1221110 0112235777 54 6899999876531 1
Q ss_pred CeeEEEEEEeCCCC
Q 008224 278 KTGISLVYQTTDFK 291 (573)
Q Consensus 278 ~~G~illY~S~Dl~ 291 (573)
..-.+.+++|+++.
T Consensus 201 ~~y~v~~arS~~~~ 214 (279)
T cd08988 201 STYKIAVGRSKNIT 214 (279)
T ss_pred CCeEEEEEEeCCCC
Confidence 22246678898763
No 62
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.51 E-value=0.0026 Score=65.56 Aligned_cols=146 Identities=16% Similarity=0.184 Sum_probs=84.0
Q ss_pred cCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec-cCCCCcCCC--cEEeeeEEEccCC
Q 008224 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM-VPDQWYDIN--GVWTGSATILPDG 201 (573)
Q Consensus 125 P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL-~Pd~~yD~~--Gv~SGSavv~~dG 201 (573)
+...+..||+ ++.++|+++|||-..-.....+.-.|....+.| ..+...+..| .|...|+.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~~~-~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMSNP-WTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECCCC-CccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4456788997 666789999998532111111222344433433 3454333333 444455544 5678888888899
Q ss_pred eEEEEEcccCC-CCcceEEEEEecCCCCCCc-ceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCc-EEEEEee
Q 008224 202 QIVMLYTGSTD-KSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGS 274 (573)
Q Consensus 202 ~~~~~YTG~~~-~~~q~q~lA~S~D~~Dp~L-~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~-w~MvvGs 274 (573)
.++|+|.+... .....+++|+++...+++. ..|+|. .+|||.....-....---..+ ...++|+ |+|+.=+
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~g~GH~~i-v~~~~G~~~~~~yH~ 259 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVYGPGHNSF-TKSPDGTEDWIVYHA 259 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccCcCCccce-EECCCCCEEEEEEcc
Confidence 99999997653 3345567888875444322 358886 478887543100001113334 4456777 8887643
No 63
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.50 E-value=0.00096 Score=73.33 Aligned_cols=154 Identities=17% Similarity=0.209 Sum_probs=88.9
Q ss_pred ccccccccceeeeecCCCcccCCcc-----eeEECCEEEEEEeeCC-CCC--CCCCc-EEEEEEecCccCeeecc--eec
Q 008224 111 NAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYKGWYHLFYQYNP-DSA--VWGNI-TWGHAVSADLIHWLYLP--IAM 179 (573)
Q Consensus 111 ~~~~~w~Rp~yHf~P~~gWmNDPNG-----~~y~~G~YHLFYQ~nP-~~~--~wG~~-~WGHAvS~DLVhW~~lp--~AL 179 (573)
..+..|++..-=+.|.. + .|.+| .+..+|.|||||.-+- ... ..... .-.+|+|+|+++|+..+ +.|
T Consensus 46 ~Dlv~W~~~~~aL~P~~-~-~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi 123 (437)
T smart00640 46 KDLVHWTHLPVALAPDE-W-YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVL 123 (437)
T ss_pred CCcceeeecCcccCCCC-c-CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEE
Confidence 34666754332244543 2 35554 3445788999998652 111 12222 23678999999999873 556
Q ss_pred cCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCee
Q 008224 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259 (573)
Q Consensus 180 ~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V 259 (573)
.+...+.....-...++..++|+++|++.+...+..-.+.++.|+| |++|+.. .+++.+..+.....|=.|-.
T Consensus 124 ~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~wECPdl 196 (437)
T smart00640 124 VPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMWECPDL 196 (437)
T ss_pred eCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceEECCcE
Confidence 5543222223335555444446999999876544445577888887 4899885 34543311211134556665
Q ss_pred EeecCCC-----cEEEEEeee
Q 008224 260 AWAGPDG-----KWRLTIGSK 275 (573)
Q Consensus 260 ~w~~~dG-----~w~MvvGs~ 275 (573)
+ . -++ +|+|+++..
T Consensus 197 f-~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 197 F-P-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred E-E-eCCCCCceeEEEEECcC
Confidence 3 2 234 899988765
No 64
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.32 E-value=0.0053 Score=62.76 Aligned_cols=138 Identities=15% Similarity=0.104 Sum_probs=80.7
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceee-cc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~-lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
=|. +++++|+|+|||.-+ ...|+|+|+|.. .|+. .+ +.+.+.. .......++++.++||+.+|+|.
T Consensus 68 AP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~ 136 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWG 136 (275)
T ss_pred CCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEc
Confidence 365 788899999999864 357899999965 6876 33 2233321 22345678888778999999997
Q ss_pred ccCCCCcceEEE-EEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC--CeeEEEEE
Q 008224 209 GSTDKSVQVQNL-AYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLVY 285 (573)
Q Consensus 209 G~~~~~~q~q~l-A~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--~~G~illY 285 (573)
+.. ...+ ..+.| +.+|+.. ...+...+. .-+=-|.+ ++ .+|+|||++.+... ..-.+...
T Consensus 137 ~~~-----~~~i~~l~~d-----~~~~~~~-~~~~~~~~~----~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya 199 (275)
T cd09004 137 GWG-----HCNVAKLNED-----MISFDGE-RDGSEITPK----NYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYA 199 (275)
T ss_pred CcC-----CEEEEEECCC-----cccccCc-ceeeeccCC----CceecceE-EE-ECCEEEEEEECCCCCCCCceEEEE
Confidence 531 1222 23444 2556432 111101111 12346777 44 68999999876421 11244456
Q ss_pred EeCCCC-CcEEcc
Q 008224 286 QTTDFK-TYELLD 297 (573)
Q Consensus 286 ~S~Dl~-~W~~~~ 297 (573)
+|++.. -|+..+
T Consensus 200 ~s~~~~GP~~~~~ 212 (275)
T cd09004 200 MADSPLGPFERPG 212 (275)
T ss_pred EcCCCCCCcccCC
Confidence 777753 365543
No 65
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.32 E-value=0.00078 Score=70.09 Aligned_cols=115 Identities=17% Similarity=0.250 Sum_probs=84.4
Q ss_pred ccCCC--CcCCC----cEEeeeEEEccCCeEEEEEccc-----CCCCcceEEEEEecCCCCCCcce-EEEeCCCceecC-
Q 008224 179 MVPDQ--WYDIN----GVWTGSATILPDGQIVMLYTGS-----TDKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLVP- 245 (573)
Q Consensus 179 L~Pd~--~yD~~----Gv~SGSavv~~dG~~~~~YTG~-----~~~~~q~q~lA~S~D~~Dp~L~~-W~K~~~nPVl~~- 245 (573)
|.|.. .++.. .+|-++++. .++++.|+|-.. .........+|.|+|+ .+ |++.+ +|++.|
T Consensus 14 i~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P~ 86 (314)
T COG2152 14 ITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWPA 86 (314)
T ss_pred eeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEecC
Confidence 44444 34555 789998864 689999999873 2234567789999987 45 99864 799887
Q ss_pred CCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEccccccc
Q 008224 246 PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (573)
Q Consensus 246 p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~ 302 (573)
...++....-||-|.. .+|+|+|.+.+..+.+-...+..++|+.+|++.+.++.+
T Consensus 87 ~~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 87 NYPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred CCchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 2234455667999953 579999999987555445668889999999999887643
No 66
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.30 E-value=0.0094 Score=61.15 Aligned_cols=146 Identities=16% Similarity=0.198 Sum_probs=86.0
Q ss_pred ccCCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 130 MNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
+-=|. ++|+ +|+|||||..+..+ .+....|+|+|++.. .|+.++..+ |. ..+....++++++||+.+|+
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~ 136 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLL 136 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEE
Confidence 34454 5664 59999999987522 245688999998765 477665432 21 23456788888889999999
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC-CeeEEEEE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVY 285 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~-~~G~illY 285 (573)
|....+ +...++.-++. +..+ .+.+..... ...+-.|.+ ++ .+|.|||+...... ....+..+
T Consensus 137 ~~~~~~---~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~~y~ 200 (265)
T cd08985 137 YSDRDN---SDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDARYA 200 (265)
T ss_pred EecCCC---CceEEEEeCCC----cccc---cceEEEccC----CCccccceE-EE-ECCEEEEEEccCCCccCCceEEE
Confidence 986431 23344433221 2333 223332111 123457888 54 67999999865421 11234566
Q ss_pred EeCCCC-CcEEcccc
Q 008224 286 QTTDFK-TYELLDEY 299 (573)
Q Consensus 286 ~S~Dl~-~W~~~~~l 299 (573)
+|+++. .|+..+.+
T Consensus 201 ~s~s~~GP~~~~~~~ 215 (265)
T cd08985 201 TATSILGPWTDLGNP 215 (265)
T ss_pred EecCCCCCccccCcC
Confidence 787764 56665543
No 67
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.28 E-value=0.0076 Score=63.47 Aligned_cols=167 Identities=19% Similarity=0.243 Sum_probs=99.3
Q ss_pred ccccceeeeecC--CCcccCCcceeEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEecCc-cCeeecceeccCCC
Q 008224 115 TWQRTSFHFQPE--KNWMNDPNGPLFYK-GWYHLFYQYNPDSA-------VWGNITWGHAVSADL-IHWLYLPIAMVPDQ 183 (573)
Q Consensus 115 ~w~Rp~yHf~P~--~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~-------~wG~~~WGHAvS~DL-VhW~~lp~AL~Pd~ 183 (573)
.|..++.-.... ...+.||. +++.. |+-+|||...+... .+...+-.+.+|+|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 454443333322 24567897 66776 99999998877642 223456677888885 89975 43344332
Q ss_pred C-cCCCcEE--eeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE
Q 008224 184 W-YDINGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (573)
Q Consensus 184 ~-yD~~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (573)
. .+....+ .|..++..+|++++.+.+....+.....+.+|+|.+ ++|+... ++ .+ ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE
Confidence 1 1122233 233455678998876555433334556678898875 8997632 11 11 1233467874
Q ss_pred eecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCcEEccc
Q 008224 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (573)
Q Consensus 261 w~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W~~~~~ 298 (573)
.-++|+.+|+..... .+...+|.|.| ...|+....
T Consensus 205 -el~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 -ELSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred -EecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 235898888765532 45666888877 489986543
No 68
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.21 E-value=0.0089 Score=61.36 Aligned_cols=131 Identities=15% Similarity=0.143 Sum_probs=75.6
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEccc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 210 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~ 210 (573)
-|. +.|.+|+|||||-.+. . .-+.|+|++.. .|+..+... ....+++++++||+.+|+|.+.
T Consensus 78 AP~-v~~~~gkyy~yys~~~-----~--~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~ 140 (269)
T cd09001 78 APS-LRYHNGTFYVFFCTNT-----G--GTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG 140 (269)
T ss_pred CCc-eEEECCEEEEEEEecC-----C--CeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC
Confidence 454 6788999999998751 1 23567777743 676654321 3457788888899999999653
Q ss_pred CCCCcceEEEE-EecCCCCCCcceEEEeCCCce-ecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeC
Q 008224 211 TDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (573)
Q Consensus 211 ~~~~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~ 288 (573)
.+.++ .+.|. .... ...++ +..+. ......=-|++ ++ .+|+|||++.+..+....+.+++|+
T Consensus 141 ------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~ 204 (269)
T cd09001 141 ------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSK 204 (269)
T ss_pred ------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeC
Confidence 23333 23332 2221 11223 33221 11112336777 44 6899999987643222345578898
Q ss_pred CCC-CcEE
Q 008224 289 DFK-TYEL 295 (573)
Q Consensus 289 Dl~-~W~~ 295 (573)
++. -|+.
T Consensus 205 ~~~GP~~~ 212 (269)
T cd09001 205 SLTGPYES 212 (269)
T ss_pred CCCCCcCC
Confidence 854 3544
No 69
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.03 E-value=0.021 Score=58.82 Aligned_cols=143 Identities=16% Similarity=0.082 Sum_probs=80.6
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcc
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 209 (573)
.-|. ++|++|+|||||...... + ...-+.|+|+|.- -|++ +. +.+. .+..++++.++||+.+|+|-.
T Consensus 69 WAP~-v~~~~g~yy~yy~~~~~~--~-~~~~~v~~s~~p~gpw~~-~~-~~~~------~~iDp~vf~d~dG~~Y~~~~~ 136 (288)
T cd09000 69 WAPT-IRYHDGTFYLITTNVDGM--K-DGGNFIVTADDPAGPWSD-PV-WLDS------GGIDPSLFFDDDGKVYLVGNG 136 (288)
T ss_pred Ecce-EEEECCEEEEEEEecCCC--C-CCceEEEEeCCCCCCCcC-CE-ecCC------CccCCceeEcCCCCEEEEecc
Confidence 3465 788899999999876432 2 2345678898873 6774 22 2221 456788888779999998865
Q ss_pred cCCC----CcceEEEEEecCCCCCCcceEEEeCCCce-ecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCeeEEE
Q 008224 210 STDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (573)
Q Consensus 210 ~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G~il 283 (573)
.... ..+.+.++.... ..|+- .+.++ +..... ....=-|.+ ++ .+|+|||++.+.. ...-.+.
T Consensus 137 ~~~~~~~~~~~~i~~~~l~~------~~~~~-~~~~~~~~~~~~--~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~ 205 (288)
T cd09000 137 WDERRGYNGHGGIWLQEIDL------ETGKL-LGEPKVIWNGTG--GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVT 205 (288)
T ss_pred cCCccccCCCCcEEEEEEcc------ccCCC-CCCcEEEEeCCC--CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEE
Confidence 4221 123344443321 11111 11221 111100 011235777 54 6899999986432 1223466
Q ss_pred EEEeCCCC-CcEEc
Q 008224 284 VYQTTDFK-TYELL 296 (573)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (573)
+++|+++. -|+..
T Consensus 206 ~~~s~~~~Gp~~~~ 219 (288)
T cd09000 206 VARSRSITGPYEPA 219 (288)
T ss_pred EEEeCCCCCCCccC
Confidence 88999876 67653
No 70
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.02 E-value=0.025 Score=59.51 Aligned_cols=147 Identities=12% Similarity=0.145 Sum_probs=82.5
Q ss_pred CCcceeEEC----CEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeec-ceec-cCCC-CcC-CCcEEeeeEEEccCCe
Q 008224 132 DPNGPLFYK----GWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYL-PIAM-VPDQ-WYD-INGVWTGSATILPDGQ 202 (573)
Q Consensus 132 DPNG~~y~~----G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~l-p~AL-~Pd~-~yD-~~Gv~SGSavv~~dG~ 202 (573)
-|. +++++ |+|+|||... ....|.|+|+|.. .|+.+ +..| .+.. ..+ ......+++++++||+
T Consensus 80 AP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~ 151 (311)
T cd09003 80 APS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQ 151 (311)
T ss_pred CCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCC
Confidence 354 67777 9999999532 2347999999955 79874 3222 2211 111 1124688888888999
Q ss_pred EEEEEcccCC----CCcceEEEEEec-CCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-
Q 008224 203 IVMLYTGSTD----KSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI- 276 (573)
Q Consensus 203 ~~~~YTG~~~----~~~q~q~lA~S~-D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~- 276 (573)
.+|+|.+... ...+.+.+|.-+ |. .+ ..+.++....+ ..+=-|.+ ++ .+|+|||++.+.-
T Consensus 152 ~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~~~ 217 (311)
T cd09003 152 GYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTNFG 217 (311)
T ss_pred EEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----CceEeeeE-EE-ECCEEEEEEeCCCC
Confidence 9999975322 112334444333 31 22 22233322111 12345777 44 6899999886531
Q ss_pred ------CCeeEEEEEEeCCCC-CcEEccccc
Q 008224 277 ------GKTGISLVYQTTDFK-TYELLDEYL 300 (573)
Q Consensus 277 ------~~~G~illY~S~Dl~-~W~~~~~l~ 300 (573)
.....+...+|++.. -|+..++++
T Consensus 218 ~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 218 GRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred ccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 223345555777643 477655544
No 71
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.91 E-value=0.0094 Score=60.23 Aligned_cols=149 Identities=19% Similarity=0.307 Sum_probs=89.3
Q ss_pred ccCCcceeE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE-
Q 008224 130 MNDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML- 206 (573)
Q Consensus 130 mNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~- 206 (573)
..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.+.......+...+.++...+|++++-
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~~ 125 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAPY 125 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEEE
Confidence 35676 444 399999999666555555444444599999 99998754 33333222233445555566679987775
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~ 286 (573)
|.. ........+.+|.|.+ ++|+... ++.. ....--|.+ ....+|+.+|++-.. . .+.+.+++
T Consensus 126 ~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~-~~~~dG~l~~~~R~~-~-~~~~~~~~ 188 (275)
T PF13088_consen 126 YHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSI-VELPDGRLLAVFRTE-G-NDDIYISR 188 (275)
T ss_dssp EEE--SSCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEE-EEETTSEEEEEEEEC-S-STEEEEEE
T ss_pred eec--cccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEE-EECCCCcEEEEEEcc-C-CCcEEEEE
Confidence 443 2223566788999975 9998863 2210 011223444 334788888887553 2 22666778
Q ss_pred eCC-CCCcEEcc
Q 008224 287 TTD-FKTYELLD 297 (573)
Q Consensus 287 S~D-l~~W~~~~ 297 (573)
|.| ..+|+...
T Consensus 189 S~D~G~TWs~~~ 200 (275)
T PF13088_consen 189 STDGGRTWSPPQ 200 (275)
T ss_dssp ESSTTSS-EEEE
T ss_pred ECCCCCcCCCce
Confidence 877 79998743
No 72
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=96.90 E-value=0.0034 Score=69.98 Aligned_cols=100 Identities=22% Similarity=0.391 Sum_probs=63.6
Q ss_pred EEEEecCccCeeecceeccCCCC-------cCCCcEEeeeEEEccCCeEEEEEcccCCCC---cceEEEEEecCCCCCCc
Q 008224 162 GHAVSADLIHWLYLPIAMVPDQW-------YDINGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLL 231 (573)
Q Consensus 162 GHAvS~DLVhW~~lp~AL~Pd~~-------yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~---~q~q~lA~S~D~~Dp~L 231 (573)
.-+.|+||+||+.....|.+... -+..|||..++. .+||+++|+||-..... ....+..++++..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 34779999999988765555432 246789999986 79999999998664321 12223333332211
Q ss_pred ceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 232 ~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
-.|.. |+..+-. .--||.+++ ++||+-+|+.|+-
T Consensus 132 G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w 165 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSW 165 (549)
T ss_pred CCccc----ceecCCc-----CccCCceee-cCCCCEEEEeccc
Confidence 35643 3433221 124999954 6889988998875
No 73
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=96.59 E-value=0.22 Score=50.79 Aligned_cols=206 Identities=15% Similarity=0.257 Sum_probs=105.5
Q ss_pred eeecCCCcc--cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE-Ec
Q 008224 122 HFQPEKNWM--NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT-IL 198 (573)
Q Consensus 122 Hf~P~~gWm--NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSav-v~ 198 (573)
-.+|..||. -||- .++|+|+||+|....-.+..||.|.. .-+-+|.....| +.. |-..+.-...++ ..
T Consensus 15 L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~sm~f-----~~Ftdws~~~sA--~q~-~m~~~~vAP~vFYFa 85 (271)
T PF03664_consen 15 LAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYGSMNF-----GPFTDWSQMASA--SQN-YMDQSAVAPQVFYFA 85 (271)
T ss_pred cccCCCCceeccCce-EEeECCEEEEEEEeccCCCccceEee-----eccCCHHHhhcc--ccc-cCCcccccceEEEec
Confidence 356778885 6997 89999999999987654545544433 345567765543 111 111111112222 24
Q ss_pred cCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecC-CCCCCCCCCCCCeeEeecCCCcEEEEEeeecC
Q 008224 199 PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (573)
Q Consensus 199 ~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~ 277 (573)
+....||.|--.... -...++.|.++| ..|... .|++.. ..+ .....-|..|+- .+..-||+....
T Consensus 86 Pk~~W~L~yQwg~~~----fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~-~~~g~iD~~vI~--D~~n~yLFfa~D-- 152 (271)
T PF03664_consen 86 PKNIWYLAYQWGPAA----FSYSTSSDPTNP--NGWSAP--QPLFSGSISG-SGTGPIDQWVIC--DDTNMYLFFAGD-- 152 (271)
T ss_pred CCcEEEEEEecCCCc----ceeecCCCCCCC--ccCCCC--cccccccccC-CCCCceeeEEEe--cCCceEEEEcCC--
Confidence 677788888632111 123355677766 468764 345431 111 123457888864 333445554322
Q ss_pred CeeEEEEEEeCC-CCCc----EEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEE
Q 008224 278 KTGISLVYQTTD-FKTY----ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAI 352 (573)
Q Consensus 278 ~~G~illY~S~D-l~~W----~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~i 352 (573)
.|. ||+|.= +-++ .-...+..+......+|-++.|.|... .+++|.+...+..+.||.-
T Consensus 153 -nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~G~-------------~~YLmiVEaiGs~gRyFRS 216 (271)
T PF03664_consen 153 -NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVKGQ-------------NQYLMIVEAIGSDGRYFRS 216 (271)
T ss_pred -CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEcCC-------------ceEEEEEEEecCCCcEEEe
Confidence 243 688742 2221 100111111122348999999999632 3566665544433334332
Q ss_pred EEecCCCCcccCC
Q 008224 353 GTYNPANDKWTPD 365 (573)
Q Consensus 353 G~~d~~~~~f~pd 365 (573)
=+=..-.+.|+|.
T Consensus 217 fTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 217 FTATSLDGPWTPQ 229 (271)
T ss_pred eecCCCCCcceec
Confidence 2222234567764
No 74
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.54 E-value=0.031 Score=58.39 Aligned_cols=134 Identities=15% Similarity=0.189 Sum_probs=74.6
Q ss_pred CCcccCCcceeEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcC----------CCcEE
Q 008224 127 KNWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYD----------INGVW 191 (573)
Q Consensus 127 ~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD----------~~Gv~ 191 (573)
..+.-||+ ++.+ +|+.+|+|-.. .++ ..|+--.+.|+..=.-.+..|. |+..+. ..++.
T Consensus 88 ~~~~IDp~-vf~DdDGk~Yl~~g~~----~~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~ 161 (295)
T cd08982 88 PPGLADPA-LFIDDDGRLYLYYGCS----NNY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWM 161 (295)
T ss_pred CCCccCCc-eEECCCCCEEEEEecC----CCC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccc
Confidence 45678997 6665 59999998421 111 1344444555442222222221 111221 23466
Q ss_pred eeeEEEccCCeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEE
Q 008224 192 TGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 270 (573)
Q Consensus 192 SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~M 270 (573)
-|..++..+|+++|+|+..... ....+.+|+|++. +..|++...|||+..+.+. ...--...+ ...++|+|++
T Consensus 162 EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~ 235 (295)
T cd08982 162 EGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWH 235 (295)
T ss_pred cccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEE
Confidence 7888878899999999864322 2235678888765 4567776678988643221 001112223 3456788887
Q ss_pred EE
Q 008224 271 TI 272 (573)
Q Consensus 271 vv 272 (573)
+.
T Consensus 236 ~y 237 (295)
T cd08982 236 VG 237 (295)
T ss_pred EE
Confidence 75
No 75
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.17 E-value=0.12 Score=52.27 Aligned_cols=146 Identities=17% Similarity=0.089 Sum_probs=78.9
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--cCc-cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCC---
Q 008224 141 GWYHLFYQYNPDSAVWGNITWGHAVS--ADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS--- 214 (573)
Q Consensus 141 G~YHLFYQ~nP~~~~wG~~~WGHAvS--~DL-VhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~--- 214 (573)
|....|+.- +...+...-.-.+| +|. .+|...-....+. .....+..++++.+++|++++||+......
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 455566655 33334444444444 886 7898754444333 223567777777778999999995443221
Q ss_pred cceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCc
Q 008224 215 VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTY 293 (573)
Q Consensus 215 ~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W 293 (573)
.......+|.|.+ ++|.... .|...+........+.+-+. -.+|++++..-........+.++.|+| .+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i~--~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPIQ--LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEEE--ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeeeE--ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222238999975 9999863 23222111111122333222 258888776322222334455555555 7899
Q ss_pred EEcccc
Q 008224 294 ELLDEY 299 (573)
Q Consensus 294 ~~~~~l 299 (573)
+....+
T Consensus 148 ~~~~~~ 153 (275)
T PF13088_consen 148 SSGSPI 153 (275)
T ss_dssp EEEEEC
T ss_pred eccccc
Confidence 986554
No 76
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=95.90 E-value=0.21 Score=52.43 Aligned_cols=142 Identities=12% Similarity=0.160 Sum_probs=77.0
Q ss_pred CCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---eeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 132 DPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 132 DPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVh---W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
-|. ++|+ +++|.||||+.+ ...++|+|..+ |....+.......-...|...-.+ |.+|++++||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLf 148 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLF 148 (303)
T ss_pred cCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEE
Confidence 565 5655 599999999722 35799999765 765433332221112234445555 6789999999
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCC--cEEEEEeeecCCeeE-EE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG--KWRLTIGSKIGKTGI-SL 283 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG--~w~MvvGs~~~~~G~-il 283 (573)
|.+.+. .+..|-... ..|-....+++....+.....-|--|.| .+ .+| +|+|++-+.....+. ..
T Consensus 149 f~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfr 216 (303)
T cd08987 149 FSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFR 216 (303)
T ss_pred EecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEE
Confidence 987532 233332221 1122111122222111111244667888 54 444 999999775321221 22
Q ss_pred EEEeCCCC-CcEEc
Q 008224 284 VYQTTDFK-TYELL 296 (573)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (573)
-++|++|. .|+..
T Consensus 217 s~Ts~Sl~GpWt~~ 230 (303)
T cd08987 217 SWTATSLDGPWTPL 230 (303)
T ss_pred EEEcCCCCCCceec
Confidence 36777765 78876
No 77
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=95.25 E-value=0.25 Score=51.75 Aligned_cols=117 Identities=21% Similarity=0.252 Sum_probs=78.1
Q ss_pred cccccccccceeeeecCCCcccCCcce-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-cCccCeeecc---eecc
Q 008224 110 TNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYNPDSAVWGNITWGHAVS-ADLIHWLYLP---IAMV 180 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gWmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS-~DLVhW~~lp---~AL~ 180 (573)
+..++.|++..-=+.|. ++ .|.+|+ +..++.+|+||.-+-... ...-..|+| .|.+||+..+ ++|.
T Consensus 45 S~Dlv~W~~~~~aL~P~-~~-~d~~g~~SGs~~~~~~~~~~~YTg~~~~~---~~~q~~A~s~d~~~~w~k~~~~~pvi~ 119 (308)
T PF00251_consen 45 SKDLVHWEHLPVALPPD-EE-YDADGCFSGSAVVDDDNLVLFYTGNNRDG---KQVQCLAYSTDDGITWTKYPQGNPVIP 119 (308)
T ss_dssp ESSSSSEEEEEEEE-SS-SG-GGTTEEEEEEEEEETTCEEEEEEEEETTT---EEEEEEEEESSTTSSEEE-TTTCESBE
T ss_pred CCCCCCceeCCceEccc-cc-CCcCccCcceEEEECCEEEEEEeccCCCC---CeEEEEEEECCCCCceEEcCCCCcEEE
Confidence 34467787665555555 33 577773 335889999998765421 345677999 8899999843 4454
Q ss_pred CCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEe
Q 008224 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 181 Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
.....+..+.-...++..++|+++|+..+... ....+.+..|+| |++|+..
T Consensus 120 ~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~D-----l~~W~~~ 170 (308)
T PF00251_consen 120 EPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDD-----LIHWEYL 170 (308)
T ss_dssp SSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESS-----SSSEEEE
T ss_pred ecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCC-----cccCcee
Confidence 22222566777888866678999998877654 444566778877 4899986
No 78
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=92.51 E-value=0.12 Score=43.65 Aligned_cols=36 Identities=28% Similarity=0.297 Sum_probs=30.1
Q ss_pred CcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCC
Q 008224 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFV 549 (573)
Q Consensus 508 gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs 549 (573)
++|||.++++++..|+|.|+|+.. ...+|.|+++|+
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~------~~~l~vDR~~s~ 44 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPA------NGTLTVDRTNSG 44 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETT------TTEEEEEETTSS
T ss_pred CCeEEEEEECCCccEEEEEEEECC------CCEEEEeCCCCc
Confidence 469999999999999999999632 235668999999
No 79
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=91.29 E-value=0.83 Score=48.42 Aligned_cols=88 Identities=25% Similarity=0.475 Sum_probs=49.9
Q ss_pred eeEEEccCCeEEEEEcccCCCCc-ceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE-eecCCCcEEE
Q 008224 193 GSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRL 270 (573)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~-q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~dG~w~M 270 (573)
||-|+.+||++++=-.+...++. .+-.|-||+|.+ .+|+-..+. .....+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec--cCCeeEE
Confidence 44456689998877777655555 366788999864 899875432 22456899987 5 4788888
Q ss_pred EEeeecCCeeEEEEEEeCCC-CCcEEccc
Q 008224 271 TIGSKIGKTGISLVYQTTDF-KTYELLDE 298 (573)
Q Consensus 271 vvGs~~~~~G~illY~S~Dl-~~W~~~~~ 298 (573)
+.... .|.--+|+|.|+ ..|+..-.
T Consensus 189 ~~~c~---~g~rrVYeS~DmG~tWtea~g 214 (310)
T PF13859_consen 189 MTACD---DGRRRVYESGDMGTTWTEALG 214 (310)
T ss_dssp EEE-T---TS---EEEESSTTSS-EE-TT
T ss_pred EEecc---cceEEEEEEcccceehhhccC
Confidence 76542 244458999885 67997433
No 80
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=91.00 E-value=10 Score=39.83 Aligned_cols=148 Identities=15% Similarity=0.155 Sum_probs=82.4
Q ss_pred CcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCC----------CcceEEEEEecCC
Q 008224 158 NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK----------SVQVQNLAYPADP 226 (573)
Q Consensus 158 ~~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----------~~q~q~lA~S~D~ 226 (573)
.+...-+.|.| ..+|... .++..... ....++..+.+.+.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 46667788887 6899885 44444332 2356788888776559999999765421 2345778889887
Q ss_pred CCCCcceEEEeCCCceecCC--CCCCCCCCCCCeeEeecCCCcEEEEEeeecCC--eeEEEEEEeCCCCCcEEccccccc
Q 008224 227 SDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGISLVYQTTDFKTYELLDEYLHA 302 (573)
Q Consensus 227 ~Dp~L~~W~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~--~G~illY~S~Dl~~W~~~~~l~~~ 302 (573)
+ .+|.+.. .+.... ..+ ..-++-|--.-.-.+|+++|.+-..... .-..++|..++.+.|+..... ..
T Consensus 123 G----~tW~~p~--~l~~~~~~~~~-~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~-~~ 194 (351)
T cd00260 123 G----ITWSSPR--DLTPSVKGDNW-AALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEGV-ND 194 (351)
T ss_pred C----ceecCCc--cCCccccCcce-eEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCCC-CC
Confidence 5 8998632 222111 011 1112333100112478887776443221 223445555567999864322 11
Q ss_pred CCCCCceeeecEEEec
Q 008224 303 VPGTGMWECVDFYPVA 318 (573)
Q Consensus 303 ~~~~GmWECPd~f~l~ 318 (573)
..++.| |.++++.
T Consensus 195 --~~~~~e-~~i~el~ 207 (351)
T cd00260 195 --AGGCSE-CSVVELS 207 (351)
T ss_pred --CCCCcC-CEEEEec
Confidence 133456 5577775
No 81
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=89.42 E-value=2.5 Score=42.58 Aligned_cols=103 Identities=27% Similarity=0.539 Sum_probs=65.6
Q ss_pred eeEECC-EEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec--ceecc-CCCCcCCCcEE--eeeEEEccCCeEEEEEcc
Q 008224 136 PLFYKG-WYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL--PIAMV-PDQWYDINGVW--TGSATILPDGQIVMLYTG 209 (573)
Q Consensus 136 ~~y~~G-~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~l--p~AL~-Pd~~yD~~Gv~--SGSavv~~dG~~~~~YTG 209 (573)
.++++| .|.++-|..|.-. |+.....|.-.+- |+-. |+.|. |.-.|+..|.| -|-||+..+|++.+-|..
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--gnsniyiaemenp--wtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysa 212 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMENP--WTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSA 212 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--CCcceEEEeccCC--ceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEec
Confidence 456666 6888889888643 4444445544443 6543 45454 33366677876 788988899999999998
Q ss_pred cCCCCcceEEEEEec---CCCCCCcceEEEeCCCceecC
Q 008224 210 STDKSVQVQNLAYPA---DPSDPLLLDWVKYPGNPVLVP 245 (573)
Q Consensus 210 ~~~~~~q~q~lA~S~---D~~Dp~L~~W~K~~~nPVl~~ 245 (573)
...+-.-..+|-+.. |.-|| ..|+|.+ .||+..
T Consensus 213 satd~nycmgllwanen~dlldp--aswtksp-tpvf~t 248 (324)
T COG3940 213 SATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFKT 248 (324)
T ss_pred cccccceeeeeeeecccCCcCCc--hhcccCC-Ccceee
Confidence 754433444443332 33344 5899975 788864
No 82
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=83.71 E-value=22 Score=37.90 Aligned_cols=160 Identities=20% Similarity=0.185 Sum_probs=88.8
Q ss_pred cccCCcceeEECCEEEEEEeeCCC-C---CCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcE------EeeeEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPD-S---AVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV------WTGSATI 197 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~-~---~~wG~~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv------~SGSavv 197 (573)
+-==|.+.|-.+|+-+|.|+..-. + ..|..-.=+.|.|+| .-+|+..+.++.+.... ..|+ |.=++..
T Consensus 93 ~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~-~~g~~~~~~~fq~~a~~ 171 (316)
T PF13810_consen 93 TTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPF-HPGFNQGNWNFQMAAFV 171 (316)
T ss_pred eEEcccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCcccccccc-cCCcccccccccccccc
Confidence 333478888889998899875411 1 123222337899999 88999998666655411 1121 2222333
Q ss_pred ccCCeEEEEEcccCCCCcceEEEEEec--CCCCCC------cce--EEEeC--CCceecCCCCCCCCCCCCCeeEeecCC
Q 008224 198 LPDGQIVMLYTGSTDKSVQVQNLAYPA--DPSDPL------LLD--WVKYP--GNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 198 ~~dG~~~~~YTG~~~~~~q~q~lA~S~--D~~Dp~------L~~--W~K~~--~nPVl~~p~g~~~~~fRDP~V~w~~~d 265 (573)
..||-+|+|=|...+. ....||.-. +..|+. ... |.+.. ..||+..+- ---.|.|.+..
T Consensus 172 ~~dgyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~v-------gElSv~~~~~~ 242 (316)
T PF13810_consen 172 KDDGYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPV-------GELSVRYNEYL 242 (316)
T ss_pred CCCCEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCc-------cceEEEEeCCC
Confidence 4677777776654432 223344321 111210 122 65532 136654332 23366787778
Q ss_pred CcEEEEEeeecCCeeEEEEEEeCCCC-CcEEccccc
Q 008224 266 GKWRLTIGSKIGKTGISLVYQTTDFK-TYELLDEYL 300 (573)
Q Consensus 266 G~w~MvvGs~~~~~G~illY~S~Dl~-~W~~~~~l~ 300 (573)
|+|+|+.... ..+.|.+.++++.. .|+....+.
T Consensus 243 gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~~~l~ 276 (316)
T PF13810_consen 243 GKWVLSYFDA--GTGGIVLRTAPSPTGPWSEPKPLV 276 (316)
T ss_pred CEEEEEEecc--cCCcEEEEecCCCCCCCCCCeeEE
Confidence 9999997642 23456677777776 587544443
No 83
>PTZ00334 trans-sialidase; Provisional
Probab=80.77 E-value=9.8 Score=45.16 Aligned_cols=149 Identities=18% Similarity=0.312 Sum_probs=82.5
Q ss_pred ccCCcceeEECCEEEEE--EeeCCC--------CCCCC-CcEEEEEEec-----CccCeeecceeccCCC-CcCC---Cc
Q 008224 130 MNDPNGPLFYKGWYHLF--YQYNPD--------SAVWG-NITWGHAVSA-----DLIHWLYLPIAMVPDQ-WYDI---NG 189 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLF--YQ~nP~--------~~~wG-~~~WGHAvS~-----DLVhW~~lp~AL~Pd~-~yD~---~G 189 (573)
.-.|--++.-+..|=|- |-.+.. ...|+ ...+|+++-. .-|+|.+. ..|.... .... .+
T Consensus 179 v~rPTTvvKGn~VfmLvG~y~~~~~~~~~~~~~~~~~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~ 257 (780)
T PTZ00334 179 VSRPTTVVNGSDIYMFAGTYSFEVTDKAGNTAAAAKWGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTR 257 (780)
T ss_pred ccCCeEEeeCCEEEEEecccccccccccccccccCCCccEEEEEEeecCCCCCcceEECcCc-ccCCcccccccccccee
Confidence 34566555555556555 311111 12344 3678888632 35999773 2331111 1011 11
Q ss_pred EE--eeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE-eecCCC
Q 008224 190 VW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDG 266 (573)
Q Consensus 190 v~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~dG 266 (573)
.+ =||.|+.+||++++=-.+...++..+-.|-||+|.+ +|+-..+ ....+.+||.|. | ++|
T Consensus 258 ~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~g---------~s~~gC~~P~I~EW--e~g 321 (780)
T PTZ00334 258 LIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSKG---------MSADGCSDPSVVEW--KEG 321 (780)
T ss_pred ecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcCC---------CCCCCCCCCEEEEE--cCC
Confidence 11 244455689998765556544444455678898852 5854322 223467899986 5 357
Q ss_pred cEEEEEeeecCCeeEEEEEEeCCC-CCcEEccc
Q 008224 267 KWRLTIGSKIGKTGISLVYQTTDF-KTYELLDE 298 (573)
Q Consensus 267 ~w~MvvGs~~~~~G~illY~S~Dl-~~W~~~~~ 298 (573)
+-.|+.... .|.--+|+|.|. ..|+..-.
T Consensus 322 kLlM~t~C~---dG~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 322 KLMMMTACD---DGRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred eEEEEEEeC---CCCEEEEEECCCCCChhhCCC
Confidence 877776543 244458999995 67986433
No 84
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=71.68 E-value=18 Score=38.53 Aligned_cols=96 Identities=19% Similarity=0.337 Sum_probs=55.3
Q ss_pred EccCCeEEEEEcccCCCC-------cceEEEEEecCCCCCCcceEEEeCCCceecCC---CCCCCCCCCCCeeEeecCCC
Q 008224 197 ILPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDFRDPTTAWAGPDG 266 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~~~-------~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p---~g~~~~~fRDP~V~w~~~dG 266 (573)
|..+|+.||.|..+..-+ ...-.||+|.|.+ .+|++.+. .+-... ++......-....++. .++
T Consensus 101 I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~~-~~~~~~~~~~g~~~~~~~fq~~a~~-~~d 174 (316)
T PF13810_consen 101 ISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVPG-TIRPNSPFHPGFNQGNWNFQMAAFV-KDD 174 (316)
T ss_pred EEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCCC-cccccccccCCcccccccccccccc-CCC
Confidence 345899999999875321 1246799999975 89999742 222221 1211001111222232 345
Q ss_pred cEEEEEeeecCCeeEEEEEEe-----CCCCCcEEccc
Q 008224 267 KWRLTIGSKIGKTGISLVYQT-----TDFKTYELLDE 298 (573)
Q Consensus 267 ~w~MvvGs~~~~~G~illY~S-----~Dl~~W~~~~~ 298 (573)
.|+-++|...++.|.+.|+|- .|+..|+|-..
T Consensus 175 gyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~g 211 (316)
T PF13810_consen 175 GYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWDG 211 (316)
T ss_pred CEEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccCC
Confidence 577777876555677788875 46667776543
No 85
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=65.31 E-value=6.2 Score=44.77 Aligned_cols=52 Identities=17% Similarity=0.176 Sum_probs=36.3
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEccccc
Q 008224 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300 (573)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~ 300 (573)
.|||+.. ..=||+++- ....|||..++ -...+-+.+++|.||+||+.....+
T Consensus 22 ~NPvl~g-------f~PDpSi~r--vg~dyYia~st-F~~fpGl~i~hS~DL~nW~~v~tpl 73 (549)
T COG3507 22 LNPVLAG-------FNPDPSIVR--VGDDYYIATST-FEWFPGLAIHHSRDLVNWTLVSTPL 73 (549)
T ss_pred cCccccc-------cCCCCceEe--cCCceEEEcce-EEEcCceeeeccccccCcEEecccc
Confidence 4888752 114999853 45579988763 2333337799999999999988754
No 86
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=60.63 E-value=2.8e+02 Score=31.02 Aligned_cols=128 Identities=17% Similarity=0.193 Sum_probs=78.9
Q ss_pred CCEEEEEEeeC-----CCCCCC-CCcEEEEEEecC----ccCeeecceeccCCCCcCC-------CcEEeeeEEEc-cCC
Q 008224 140 KGWYHLFYQYN-----PDSAVW-GNITWGHAVSAD----LIHWLYLPIAMVPDQWYDI-------NGVWTGSATIL-PDG 201 (573)
Q Consensus 140 ~G~YHLFYQ~n-----P~~~~w-G~~~WGHAvS~D----LVhW~~lp~AL~Pd~~yD~-------~Gv~SGSavv~-~dG 201 (573)
+|+-.|||... |..... --..-|++.+.| +-.|+.+-+.+.||..+-. ...=...++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999873 321100 014567777777 5668877777888874322 13346777766 489
Q ss_pred eEEEEEcccCCC--------------------------------CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCC
Q 008224 202 QIVMLYTGSTDK--------------------------------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249 (573)
Q Consensus 202 ~~~~~YTG~~~~--------------------------------~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~ 249 (573)
+.||+|.|++.. ..-.++||...+.. +..|+-+ .|+|... ++
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~-~v 296 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN-GV 296 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET-TT
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc-cc
Confidence 999999987621 01246788887642 3679887 4888642 21
Q ss_pred CCCCCCCCeeEeecCCCcEEEEEeeec
Q 008224 250 GPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (573)
Q Consensus 250 ~~~~fRDP~V~w~~~dG~w~MvvGs~~ 276 (573)
+ ..--=|.|+. .+|+||++..++.
T Consensus 297 ~-de~ERP~iv~--~~gkyYLFt~s~~ 320 (428)
T PF02435_consen 297 N-DELERPHIVF--MNGKYYLFTISHL 320 (428)
T ss_dssp B-S-EEEEEEEE--ETTEEEEEEEEEG
T ss_pred c-ccccCCcEEE--ECCEEEEEEEecc
Confidence 1 1122377754 5899999998873
No 87
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=50.25 E-value=26 Score=31.29 Aligned_cols=28 Identities=14% Similarity=0.240 Sum_probs=23.7
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 008224 30 ASHRKPFKGFAAILASAIFLLSLVALII 57 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (573)
....+.|..++.|+.+++++.+|+++++
T Consensus 11 ~~~g~sW~~LVGVv~~al~~SlLIalaa 38 (102)
T PF15176_consen 11 GEGGRSWPFLVGVVVTALVTSLLIALAA 38 (102)
T ss_pred CCCCcccHhHHHHHHHHHHHHHHHHHHH
Confidence 3347999999999999999999998876
No 88
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=47.88 E-value=3.5e+02 Score=28.26 Aligned_cols=71 Identities=18% Similarity=0.377 Sum_probs=40.1
Q ss_pred cCCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---eeecceeccCCCCc-CCCcEEeeeEEEccCCeEE
Q 008224 131 NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWY-DINGVWTGSATILPDGQIV 204 (573)
Q Consensus 131 NDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVh---W~~lp~AL~Pd~~y-D~~Gv~SGSavv~~dG~~~ 204 (573)
--|. ++|+ +..|.|.||+.+ ......+|+|.-+ |... ..|..+.-- ...|-..--+ |-++-..+
T Consensus 77 vAP~-vFYFaPk~~W~L~yQwg~-------~~fsY~Ts~DptnpngWSap-q~lf~g~i~~~~~g~iD~~v-I~D~~n~y 146 (271)
T PF03664_consen 77 VAPQ-VFYFAPKNIWYLAYQWGP-------AAFSYSTSSDPTNPNGWSAP-QPLFSGSISGSGTGPIDQWV-ICDDTNMY 146 (271)
T ss_pred ccce-EEEecCCcEEEEEEecCC-------CcceeecCCCCCCCccCCCC-cccccccccCCCCCceeeEE-EecCCceE
Confidence 3455 5666 789999999654 3345678888765 7542 223222210 1123333332 44456789
Q ss_pred EEEcccC
Q 008224 205 MLYTGST 211 (573)
Q Consensus 205 ~~YTG~~ 211 (573)
||++|.+
T Consensus 147 LFfa~Dn 153 (271)
T PF03664_consen 147 LFFAGDN 153 (271)
T ss_pred EEEcCCC
Confidence 9998864
No 89
>PF10898 DUF2716: Protein of unknown function (DUF2716); InterPro: IPR020323 This entry represents a group of uncharacterised proteins.
Probab=30.18 E-value=34 Score=32.49 Aligned_cols=37 Identities=24% Similarity=0.576 Sum_probs=27.9
Q ss_pred ccccccceeeeecCCCcccCC----cceeEECCEEEEEEee
Q 008224 113 MFTWQRTSFHFQPEKNWMNDP----NGPLFYKGWYHLFYQY 149 (573)
Q Consensus 113 ~~~w~Rp~yHf~P~~gWmNDP----NG~~y~~G~YHLFYQ~ 149 (573)
.|+||-+.|-|.|..---.|+ .-++|=+|-||+|.+-
T Consensus 80 aLDWQH~cy~~~P~~~~~~~e~~~W~vpv~PdGDYyfF~~~ 120 (143)
T PF10898_consen 80 ALDWQHECYWFNPHRHAEKDEFGEWPVPVYPDGDYYFFIDK 120 (143)
T ss_pred EEecCCCCEEEChhhccccccCCCccccccCCCCeEEEEec
Confidence 468999999999866544333 2367779999999874
No 90
>PF12111 PNPase_C: Polyribonucleotide phosphorylase C terminal; InterPro: IPR021968 PNPase regulates the expression of small non-coding RNAs that control expression of outer-membrane proteins. The enzyme also affects complex processes, such as the tissue-invasive virulence of Salmonella enterica and the regulation of a virulence-factor secretion system in Yersinia. In Escherichia coli, PNPase is involved in the quality control of ribosomal RNA precursors and is required for growth following cold shock. This family contains the C-terminal protomer domain of the PNPase core. The function of the C-terminal protomer is to catalyse phosphorolysis through its two active sites [].; PDB: 3H1C_S 3GCM_F 3GME_D.
Probab=26.95 E-value=21 Score=26.56 Aligned_cols=12 Identities=33% Similarity=0.736 Sum_probs=0.0
Q ss_pred cccccceeeeec
Q 008224 114 FTWQRTSFHFQP 125 (573)
Q Consensus 114 ~~w~Rp~yHf~P 125 (573)
-+||||.|.|.-
T Consensus 6 s~W~rp~y~F~G 17 (39)
T PF12111_consen 6 SEWQRPAYYFYG 17 (39)
T ss_dssp ------------
T ss_pred cccccccccccc
Confidence 369999999975
No 91
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=23.99 E-value=71 Score=29.33 Aligned_cols=11 Identities=18% Similarity=0.066 Sum_probs=6.1
Q ss_pred CCEEEEEEeeC
Q 008224 140 KGWYHLFYQYN 150 (573)
Q Consensus 140 ~G~YHLFYQ~n 150 (573)
+|.||--+...
T Consensus 81 ~g~~~~~~~~~ 91 (130)
T PF12273_consen 81 QGNFHPNPGPP 91 (130)
T ss_pred CCCCCCCCCCC
Confidence 46666655443
No 92
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=21.88 E-value=2.8e+02 Score=31.76 Aligned_cols=41 Identities=24% Similarity=0.492 Sum_probs=29.8
Q ss_pred cCCeEEEEEcccCCC---CcceEEEEEecCCCCCCcceEEEeCCCceecCC
Q 008224 199 PDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP 246 (573)
Q Consensus 199 ~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p 246 (573)
.+|.++|||-=+-+. +..+=+.|+|+| |++|+.++ |-|.|.
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~Ps 111 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAPS 111 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCCC
Confidence 689999999866433 345567899998 59999874 555543
No 93
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=21.71 E-value=4.9e+02 Score=29.63 Aligned_cols=95 Identities=17% Similarity=0.030 Sum_probs=54.3
Q ss_pred eEECCEEEEEEeeCCCCCCCCCc-EEEEEEecCccCeeec--ceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCC
Q 008224 137 LFYKGWYHLFYQYNPDSAVWGNI-TWGHAVSADLIHWLYL--PIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213 (573)
Q Consensus 137 ~y~~G~YHLFYQ~nP~~~~wG~~-~WGHAvS~DLVhW~~l--p~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~ 213 (573)
|-++|.--|||.-|-....+.+. .=.-|.|+|.++++.. ++.+..-..+ ..-....=++...+|+.+|+=-+...+
T Consensus 107 V~~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~~~~~~~~mlgAq~~~ 185 (486)
T COG1621 107 VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQPEGY-TPHFRDPKVVWDEGGKWWMMLGAQGED 185 (486)
T ss_pred EEeCCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCceecCCCcc-cccCCCCcccccCCCcEEEEEEEecCC
Confidence 44688889999877664444443 5677999999999883 3333221111 112233333445667766654333332
Q ss_pred CcceEEEEEecCCCCCCcceEEEe
Q 008224 214 SVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 214 ~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
..-.+.+-.|.| |++|+..
T Consensus 186 ~~g~i~lY~S~D-----L~~W~~~ 204 (486)
T COG1621 186 LKGTILLYESDD-----LKNWQFT 204 (486)
T ss_pred CCceEEEEeCCC-----ccCcEEE
Confidence 222344444544 6999986
No 94
>PF11807 DUF3328: Domain of unknown function (DUF3328); InterPro: IPR021765 This family of proteins are functionally uncharacterised. This family is only found in eukaryotes.
Probab=20.52 E-value=1.3e+02 Score=28.82 Aligned_cols=11 Identities=18% Similarity=0.643 Sum_probs=5.1
Q ss_pred CCCCCCCchhh
Q 008224 29 PASHRKPFKGF 39 (573)
Q Consensus 29 ~~~~~~~~~~~ 39 (573)
|.+++++++..
T Consensus 3 p~~r~~~w~~~ 13 (217)
T PF11807_consen 3 PRRRRRRWRRL 13 (217)
T ss_pred CCCCCccHHHH
Confidence 34444555544
Done!