Query 008231
Match_columns 573
No_of_seqs 216 out of 2033
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 21:10:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008231.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008231hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 6.1E-42 1.3E-46 368.3 37.2 542 12-554 13-566 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 5.8E-38 1.3E-42 321.0 33.9 460 28-550 16-489 (498)
3 PRK10207 dipeptide/tripeptide 100.0 5.8E-35 1.2E-39 314.3 44.2 461 29-554 10-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 2E-34 4.3E-39 309.9 41.2 451 29-551 6-471 (475)
5 PRK15462 dipeptide/tripeptide 100.0 5.1E-34 1.1E-38 302.7 41.7 422 31-509 7-438 (493)
6 PRK09584 tppB putative tripept 100.0 6.9E-33 1.5E-37 299.6 42.8 458 29-554 17-485 (500)
7 PRK03545 putative arabinose tr 100.0 3.8E-26 8.2E-31 240.2 34.4 376 29-548 5-380 (390)
8 PRK05122 major facilitator sup 100.0 4E-25 8.6E-30 233.1 36.7 376 30-547 12-388 (399)
9 COG2814 AraJ Arabinose efflux 99.9 5.5E-25 1.2E-29 223.8 34.6 379 29-549 9-387 (394)
10 PRK12382 putative transporter; 99.9 6.9E-25 1.5E-29 230.8 35.9 375 32-547 14-388 (392)
11 PRK11646 multidrug resistance 99.9 5.1E-25 1.1E-29 232.4 33.9 347 36-512 13-360 (400)
12 PRK14995 methyl viologen resis 99.9 7.5E-25 1.6E-29 237.5 36.0 402 30-510 3-412 (495)
13 PRK11663 regulatory protein Uh 99.9 2.5E-25 5.3E-30 237.4 31.5 170 33-236 23-192 (434)
14 PRK10504 putative transporter; 99.9 2.3E-24 5E-29 232.5 37.5 400 32-512 9-416 (471)
15 PRK11551 putative 3-hydroxyphe 99.9 1E-24 2.2E-29 230.6 33.3 359 30-511 12-370 (406)
16 PRK10054 putative transporter; 99.9 3.8E-25 8.2E-30 232.9 29.5 355 30-511 4-359 (395)
17 TIGR01299 synapt_SV2 synaptic 99.9 8.3E-25 1.8E-29 242.9 32.6 177 34-245 168-357 (742)
18 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.8E-24 4E-29 229.0 32.3 181 30-244 5-191 (412)
19 PRK10406 alpha-ketoglutarate t 99.9 3.5E-24 7.7E-29 228.4 34.6 178 31-234 20-211 (432)
20 PRK10489 enterobactin exporter 99.9 1.2E-24 2.6E-29 230.9 30.7 390 36-559 20-410 (417)
21 COG2271 UhpC Sugar phosphate p 99.9 4.6E-25 1E-29 221.2 25.0 404 34-549 26-435 (448)
22 PRK10213 nepI ribonucleoside t 99.9 8.9E-24 1.9E-28 222.4 36.1 176 26-235 13-188 (394)
23 PRK10077 xylE D-xylose transpo 99.9 3.2E-24 7E-29 231.7 32.6 437 31-557 10-466 (479)
24 PRK10642 proline/glycine betai 99.9 7.7E-24 1.7E-28 229.4 35.5 176 32-233 15-204 (490)
25 TIGR00879 SP MFS transporter, 99.9 2.8E-24 6E-29 230.8 31.4 405 59-553 53-475 (481)
26 PRK09874 drug efflux system pr 99.9 4.9E-24 1.1E-28 225.2 32.7 379 33-547 14-397 (408)
27 PRK09705 cynX putative cyanate 99.9 7.8E-24 1.7E-28 222.9 33.4 357 50-551 26-384 (393)
28 TIGR00900 2A0121 H+ Antiporter 99.9 6E-24 1.3E-28 220.2 31.3 359 37-510 3-362 (365)
29 TIGR00893 2A0114 d-galactonate 99.9 6.5E-24 1.4E-28 221.8 31.1 382 54-545 14-396 (399)
30 TIGR00903 2A0129 major facilit 99.9 9.5E-24 2.1E-28 219.6 32.0 353 53-545 10-362 (368)
31 PRK12307 putative sialic acid 99.9 6.4E-24 1.4E-28 225.9 30.6 166 31-230 16-181 (426)
32 PRK09952 shikimate transporter 99.9 2.7E-23 5.9E-28 221.8 35.0 180 27-232 16-210 (438)
33 TIGR00892 2A0113 monocarboxyla 99.9 5.4E-24 1.2E-28 228.3 29.5 372 57-542 42-415 (455)
34 TIGR00891 2A0112 putative sial 99.9 1.9E-23 4.2E-28 219.9 33.3 173 28-234 7-181 (405)
35 PRK15402 multidrug efflux syst 99.9 2.4E-23 5.3E-28 220.1 34.1 343 47-511 27-370 (406)
36 TIGR00887 2A0109 phosphate:H+ 99.9 3.1E-23 6.8E-28 225.4 35.6 446 31-557 14-497 (502)
37 TIGR00711 efflux_EmrB drug res 99.9 8.5E-24 1.8E-28 228.7 31.0 398 34-510 3-409 (485)
38 PRK09556 uhpT sugar phosphate 99.9 2.6E-24 5.7E-29 231.7 26.8 159 54-240 49-210 (467)
39 PRK11273 glpT sn-glycerol-3-ph 99.9 2.2E-23 4.7E-28 223.6 33.4 160 54-243 49-209 (452)
40 PLN00028 nitrate transmembrane 99.9 2E-23 4.2E-28 225.2 32.8 175 31-240 34-217 (476)
41 PRK03699 putative transporter; 99.9 6.2E-23 1.4E-27 216.1 35.9 376 30-548 4-380 (394)
42 TIGR00899 2A0120 sugar efflux 99.9 3.5E-23 7.6E-28 215.9 33.2 365 39-544 3-370 (375)
43 TIGR00890 2A0111 Oxalate/Forma 99.9 9.2E-24 2E-28 219.7 27.7 336 53-511 22-357 (377)
44 TIGR00897 2A0118 polyol permea 99.9 1.3E-22 2.9E-27 214.2 36.3 390 28-546 8-399 (402)
45 PF07690 MFS_1: Major Facilita 99.9 9.8E-24 2.1E-28 217.7 26.8 350 39-502 2-352 (352)
46 TIGR00894 2A0114euk Na(+)-depe 99.9 2.4E-23 5.1E-28 224.2 29.7 378 63-546 70-448 (465)
47 PRK10091 MFS transport protein 99.9 9.2E-23 2E-27 213.9 32.9 177 33-243 3-179 (382)
48 TIGR00710 efflux_Bcr_CflA drug 99.9 1.5E-22 3.2E-27 211.9 32.7 355 31-508 3-358 (385)
49 TIGR00895 2A0115 benzoate tran 99.9 1.4E-22 3.1E-27 212.5 31.8 382 31-508 15-397 (398)
50 PRK03633 putative MFS family t 99.9 2.9E-22 6.3E-27 210.1 33.6 158 31-222 4-161 (381)
51 PRK03893 putative sialic acid 99.9 1.2E-22 2.7E-27 220.4 31.9 168 29-230 16-183 (496)
52 PRK15011 sugar efflux transpor 99.9 4.2E-22 9E-27 209.8 34.7 185 27-243 9-195 (393)
53 cd06174 MFS The Major Facilita 99.9 2.3E-22 5E-27 206.7 32.0 347 36-544 2-348 (352)
54 TIGR00926 2A1704 Peptide:H+ sy 99.9 1.4E-22 2.9E-27 222.6 30.6 333 47-434 1-340 (654)
55 PRK11652 emrD multidrug resist 99.9 6.4E-22 1.4E-26 208.4 34.4 172 31-236 6-177 (394)
56 PRK15034 nitrate/nitrite trans 99.9 4.7E-22 1E-26 209.2 33.0 382 33-550 34-456 (462)
57 PRK15075 citrate-proton sympor 99.9 7.5E-22 1.6E-26 210.6 34.8 174 30-229 12-199 (434)
58 TIGR00898 2A0119 cation transp 99.9 2.6E-22 5.6E-27 218.5 31.1 384 58-554 113-500 (505)
59 PRK15403 multidrug efflux syst 99.9 2.1E-21 4.5E-26 205.7 36.8 152 59-243 41-192 (413)
60 PRK11195 lysophospholipid tran 99.9 1.2E-21 2.6E-26 206.2 34.7 164 34-235 4-167 (393)
61 TIGR00712 glpT glycerol-3-phos 99.9 3.6E-22 7.8E-27 213.3 30.3 159 55-243 48-207 (438)
62 PRK09528 lacY galactoside perm 99.9 2.6E-22 5.6E-27 213.3 28.4 392 33-549 10-404 (420)
63 TIGR00881 2A0104 phosphoglycer 99.9 2.8E-22 6.1E-27 208.6 25.8 157 54-243 15-172 (379)
64 COG2223 NarK Nitrate/nitrite t 99.9 2.5E-21 5.5E-26 194.9 31.3 388 31-550 12-403 (417)
65 PRK11043 putative transporter; 99.9 4.5E-21 9.7E-26 202.4 34.5 160 48-240 18-179 (401)
66 KOG2532 Permease of the major 99.9 5.5E-22 1.2E-26 210.0 26.9 376 63-548 67-447 (466)
67 TIGR00902 2A0127 phenyl propri 99.9 8.4E-21 1.8E-25 199.1 33.8 364 36-542 7-373 (382)
68 PRK11102 bicyclomycin/multidru 99.9 4.8E-21 1E-25 200.3 31.3 159 51-243 9-167 (377)
69 PRK10133 L-fucose transporter; 99.9 1.2E-20 2.7E-25 201.1 34.5 154 31-215 24-177 (438)
70 PF05977 MFS_3: Transmembrane 99.9 1.7E-20 3.6E-25 202.0 34.2 358 34-511 11-369 (524)
71 KOG1330 Sugar transporter/spin 99.9 4.4E-22 9.5E-27 201.7 20.2 186 26-245 26-212 (493)
72 PRK10473 multidrug efflux syst 99.9 3.6E-20 7.8E-25 194.9 35.5 172 38-243 8-179 (392)
73 TIGR00882 2A0105 oligosacchari 99.9 1.6E-20 3.5E-25 197.9 30.7 388 33-544 2-391 (396)
74 TIGR00792 gph sugar (Glycoside 99.9 1.9E-20 4.2E-25 199.8 31.2 355 42-512 8-381 (437)
75 TIGR00889 2A0110 nucleoside tr 99.9 4.6E-20 1E-24 195.6 32.6 385 37-550 6-404 (418)
76 PRK08633 2-acyl-glycerophospho 99.9 3.3E-20 7.2E-25 221.4 34.2 361 33-509 9-382 (1146)
77 TIGR00886 2A0108 nitrite extru 99.9 8.9E-21 1.9E-25 197.2 24.9 160 34-226 2-171 (366)
78 PRK11010 ampG muropeptide tran 99.9 1.6E-19 3.4E-24 195.4 35.4 388 29-547 8-402 (491)
79 PRK06814 acylglycerophosphoeth 99.9 2.3E-20 5E-25 222.4 31.7 345 59-510 41-395 (1140)
80 KOG0254 Predicted transporter 99.9 8.8E-20 1.9E-24 198.7 33.6 405 70-561 90-496 (513)
81 KOG0569 Permease of the major 99.9 2.8E-20 6E-25 195.1 26.6 397 71-559 62-465 (485)
82 PRK11128 putative 3-phenylprop 99.9 1.7E-19 3.6E-24 189.3 32.2 336 43-511 14-355 (382)
83 TIGR00883 2A0106 metabolite-pr 99.9 1.5E-19 3.3E-24 189.1 30.2 355 44-512 4-376 (394)
84 TIGR00896 CynX cyanate transpo 99.9 8.4E-20 1.8E-24 189.5 27.2 327 54-512 20-349 (355)
85 TIGR00885 fucP L-fucose:H+ sym 99.8 1.5E-18 3.2E-23 183.5 32.8 171 35-236 5-201 (410)
86 PRK11902 ampG muropeptide tran 99.8 9E-18 1.9E-22 177.4 35.0 163 42-236 8-176 (402)
87 TIGR00901 2A0125 AmpG-related 99.8 9.8E-19 2.1E-23 181.5 25.7 161 52-243 6-179 (356)
88 PF00854 PTR2: POT family; In 99.8 3.2E-20 7E-25 193.8 13.4 362 101-494 2-369 (372)
89 PF06609 TRI12: Fungal trichot 99.8 3.4E-17 7.3E-22 176.1 33.9 149 54-237 64-212 (599)
90 TIGR00806 rfc RFC reduced fola 99.8 1.2E-17 2.5E-22 173.0 26.3 170 35-241 29-202 (511)
91 TIGR01301 GPH_sucrose GPH fami 99.8 9.6E-17 2.1E-21 170.3 33.7 436 34-552 5-475 (477)
92 PRK09669 putative symporter Ya 99.8 8.1E-17 1.8E-21 172.4 30.2 357 38-512 14-389 (444)
93 KOG2533 Permease of the major 99.8 2.2E-16 4.9E-21 167.8 31.3 153 60-245 72-230 (495)
94 PRK09848 glucuronide transport 99.8 3.2E-16 7E-21 168.0 32.4 358 36-512 11-389 (448)
95 PRK10429 melibiose:sodium symp 99.8 3.2E-16 6.8E-21 169.1 31.9 364 38-512 11-394 (473)
96 KOG0255 Synaptic vesicle trans 99.8 2.1E-16 4.5E-21 172.8 30.1 141 61-237 110-250 (521)
97 COG2807 CynX Cyanate permease 99.8 6.4E-16 1.4E-20 152.7 29.7 351 32-516 11-363 (395)
98 KOG2615 Permease of the major 99.8 1.1E-16 2.4E-21 158.3 24.0 342 63-509 62-412 (451)
99 KOG0253 Synaptic vesicle trans 99.8 3.7E-16 8E-21 153.5 27.4 437 31-555 76-526 (528)
100 KOG0252 Inorganic phosphate tr 99.8 1.9E-17 4E-22 167.5 18.7 439 28-561 36-510 (538)
101 PF03825 Nuc_H_symport: Nucleo 99.8 6.5E-16 1.4E-20 161.8 31.1 384 38-549 7-396 (400)
102 KOG3764 Vesicular amine transp 99.8 1.8E-17 4E-22 164.8 17.5 150 62-243 99-248 (464)
103 TIGR00805 oat sodium-independe 99.8 1.2E-16 2.6E-21 177.1 26.0 206 29-241 28-280 (633)
104 PF01306 LacY_symp: LacY proto 99.8 1.8E-16 3.8E-21 163.4 25.2 391 33-550 7-402 (412)
105 COG0738 FucP Fucose permease [ 99.8 1.6E-15 3.5E-20 152.1 31.1 151 36-216 15-165 (422)
106 PF00083 Sugar_tr: Sugar (and 99.8 4.3E-22 9.4E-27 213.5 -17.6 394 70-560 47-448 (451)
107 TIGR02718 sider_RhtX_FptX side 99.8 2.9E-15 6.3E-20 157.5 34.2 176 36-241 4-183 (390)
108 KOG2504 Monocarboxylate transp 99.7 4E-16 8.7E-21 167.5 26.8 418 36-547 45-475 (509)
109 TIGR00788 fbt folate/biopterin 99.7 1.7E-15 3.6E-20 162.9 29.4 380 34-512 27-414 (468)
110 PTZ00207 hypothetical protein; 99.7 1.4E-14 3.1E-19 156.9 35.1 175 29-236 24-199 (591)
111 PF13347 MFS_2: MFS/sugar tran 99.7 4.1E-15 8.8E-20 158.5 28.3 357 42-512 10-385 (428)
112 PRK11462 putative transporter; 99.7 9.3E-14 2E-18 149.2 33.1 174 37-235 13-197 (460)
113 COG2211 MelB Na+/melibiose sym 99.6 6.2E-13 1.3E-17 138.6 32.7 366 35-512 14-397 (467)
114 KOG4686 Predicted sugar transp 99.6 9.2E-16 2E-20 145.5 9.0 356 35-512 46-415 (459)
115 PF11700 ATG22: Vacuole efflux 99.6 1.3E-11 2.8E-16 132.0 33.9 361 71-545 72-465 (477)
116 PRK10642 proline/glycine betai 99.5 6.9E-13 1.5E-17 143.9 17.8 178 32-240 249-428 (490)
117 PRK15011 sugar efflux transpor 99.5 1.8E-12 3.8E-17 136.6 18.9 171 36-240 219-389 (393)
118 PRK09556 uhpT sugar phosphate 99.5 8.2E-13 1.8E-17 142.4 16.6 176 33-239 258-446 (467)
119 PF03209 PUCC: PUCC protein; 99.5 9E-11 2E-15 119.4 29.9 347 61-512 7-364 (403)
120 KOG2563 Permease of the major 99.5 2E-11 4.2E-16 124.4 24.9 382 56-558 67-460 (480)
121 KOG2325 Predicted transporter/ 99.5 1.3E-12 2.8E-17 136.6 16.2 194 23-245 24-232 (488)
122 TIGR00890 2A0111 Oxalate/Forma 99.4 1.4E-12 3E-17 135.5 15.9 169 34-234 206-374 (377)
123 TIGR00889 2A0110 nucleoside tr 99.4 1.5E-12 3.2E-17 138.3 14.6 178 36-243 211-403 (418)
124 PRK05122 major facilitator sup 99.4 5.7E-12 1.2E-16 132.8 17.5 165 43-243 226-390 (399)
125 TIGR00899 2A0120 sugar efflux 99.4 6.3E-12 1.4E-16 131.0 17.3 166 40-239 206-371 (375)
126 TIGR00883 2A0106 metabolite-pr 99.4 1.9E-12 4.2E-17 135.3 12.3 168 33-231 219-390 (394)
127 PRK09952 shikimate transporter 99.4 7.2E-12 1.6E-16 133.9 16.6 181 31-240 248-431 (438)
128 cd06174 MFS The Major Facilita 99.4 1.2E-11 2.6E-16 126.9 17.7 172 34-238 176-348 (352)
129 COG2271 UhpC Sugar phosphate p 99.4 2.8E-12 6.1E-17 129.7 12.0 179 31-239 250-431 (448)
130 PRK03699 putative transporter; 99.4 9.6E-12 2.1E-16 131.0 16.6 171 33-237 205-375 (394)
131 PRK11551 putative 3-hydroxyphe 99.4 1.1E-11 2.3E-16 131.0 16.3 170 36-239 223-393 (406)
132 PRK09705 cynX putative cyanate 99.4 3.2E-11 7E-16 127.0 19.6 178 33-245 205-384 (393)
133 TIGR00902 2A0127 phenyl propri 99.4 2.2E-11 4.7E-16 127.8 18.2 169 33-237 205-374 (382)
134 TIGR01299 synapt_SV2 synaptic 99.3 1.4E-11 3E-16 137.7 16.6 132 75-240 601-732 (742)
135 PRK09528 lacY galactoside perm 99.3 3.7E-12 8E-17 135.4 11.4 160 48-240 238-401 (420)
136 PRK09874 drug efflux system pr 99.3 1.2E-11 2.6E-16 130.6 14.9 165 43-240 229-396 (408)
137 TIGR00893 2A0114 d-galactonate 99.3 3.8E-11 8.2E-16 125.2 17.9 176 33-238 215-395 (399)
138 TIGR01272 gluP glucose/galacto 99.3 1.8E-10 4E-15 117.1 22.3 83 147-235 8-106 (310)
139 TIGR00880 2_A_01_02 Multidrug 99.3 3.9E-12 8.5E-17 112.2 8.8 133 75-240 4-136 (141)
140 PRK03545 putative arabinose tr 99.3 7.5E-11 1.6E-15 124.0 19.7 174 35-242 207-380 (390)
141 PRK03893 putative sialic acid 99.3 4.5E-11 9.9E-16 129.8 18.5 149 51-230 293-441 (496)
142 PRK11663 regulatory protein Uh 99.3 3.8E-11 8.2E-16 128.2 17.2 178 33-240 243-422 (434)
143 PRK10489 enterobactin exporter 99.3 1.6E-11 3.5E-16 130.3 14.2 163 49-244 239-401 (417)
144 PRK12382 putative transporter; 99.3 3.2E-11 7E-16 126.8 15.9 162 43-240 226-387 (392)
145 PRK11273 glpT sn-glycerol-3-ph 99.3 2.7E-11 5.9E-16 130.0 15.3 177 33-239 253-432 (452)
146 PRK03633 putative MFS family t 99.3 8.7E-11 1.9E-15 123.2 17.7 157 44-237 211-367 (381)
147 COG2270 Permeases of the major 99.3 6.3E-10 1.4E-14 113.0 22.5 362 54-544 36-425 (438)
148 PF03092 BT1: BT1 family; Int 99.3 7.8E-10 1.7E-14 117.6 24.4 163 55-244 11-177 (433)
149 TIGR00892 2A0113 monocarboxyla 99.3 5.5E-11 1.2E-15 127.7 15.4 171 33-236 241-415 (455)
150 TIGR00891 2A0112 putative sial 99.3 6.1E-11 1.3E-15 124.7 15.4 159 36-226 241-400 (405)
151 TIGR00897 2A0118 polyol permea 99.3 1.5E-10 3.3E-15 122.3 18.2 177 33-240 222-399 (402)
152 COG2814 AraJ Arabinose efflux 99.2 3.2E-10 7E-15 116.1 18.0 179 31-243 209-387 (394)
153 PRK15075 citrate-proton sympor 99.2 1.1E-10 2.3E-15 124.8 14.7 153 39-221 244-398 (434)
154 PRK10406 alpha-ketoglutarate t 99.2 1.9E-10 4.1E-15 122.7 15.9 175 35-240 244-422 (432)
155 PRK11128 putative 3-phenylprop 99.2 3.4E-10 7.3E-15 118.8 17.4 166 33-234 205-371 (382)
156 TIGR00879 SP MFS transporter, 99.2 3.1E-10 6.7E-15 121.8 17.3 171 51-244 302-472 (481)
157 KOG2816 Predicted transporter 99.2 9.5E-09 2.1E-13 109.0 28.0 341 54-512 42-393 (463)
158 PRK11010 ampG muropeptide tran 99.2 3.4E-10 7.4E-15 122.7 17.6 176 36-241 225-402 (491)
159 TIGR00881 2A0104 phosphoglycer 99.2 8.2E-11 1.8E-15 122.2 12.2 162 33-224 216-379 (379)
160 PF11700 ATG22: Vacuole efflux 99.2 5.3E-10 1.1E-14 119.7 18.1 183 31-240 279-466 (477)
161 COG2223 NarK Nitrate/nitrite t 99.2 6E-10 1.3E-14 113.1 16.9 181 32-239 217-398 (417)
162 TIGR01272 gluP glucose/galacto 99.2 7.4E-10 1.6E-14 112.6 16.3 163 32-230 139-303 (310)
163 PF05631 DUF791: Protein of un 99.2 1.9E-08 4.1E-13 101.0 25.6 153 62-244 62-218 (354)
164 TIGR00900 2A0121 H+ Antiporter 99.2 1.6E-10 3.5E-15 119.4 11.0 155 33-219 210-365 (365)
165 PRK10504 putative transporter; 99.1 8.7E-10 1.9E-14 119.0 16.5 158 33-220 261-418 (471)
166 TIGR00712 glpT glycerol-3-phos 99.1 4.1E-10 8.9E-15 120.4 13.8 180 33-243 251-434 (438)
167 TIGR00882 2A0105 oligosacchari 99.1 4.5E-10 9.7E-15 118.4 13.5 171 34-237 216-390 (396)
168 PLN00028 nitrate transmembrane 99.1 1.4E-09 3.1E-14 117.5 17.2 172 35-241 254-432 (476)
169 PRK11902 ampG muropeptide tran 99.1 8.9E-10 1.9E-14 116.4 14.9 173 35-240 211-388 (402)
170 PRK10091 MFS transport protein 99.1 2.4E-09 5.1E-14 112.4 17.3 171 35-239 201-373 (382)
171 PRK12307 putative sialic acid 99.1 2.6E-09 5.7E-14 113.6 17.8 146 48-225 246-391 (426)
172 TIGR00792 gph sugar (Glycoside 99.1 8.4E-10 1.8E-14 117.8 13.9 162 32-220 221-383 (437)
173 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.8E-09 4E-14 114.4 15.8 165 33-230 242-409 (412)
174 KOG3626 Organic anion transpor 99.1 1.6E-07 3.4E-12 102.8 30.6 206 33-246 96-347 (735)
175 TIGR00894 2A0114euk Na(+)-depe 99.1 5E-09 1.1E-13 112.9 19.2 178 31-239 259-447 (465)
176 KOG4686 Predicted sugar transp 99.1 2.5E-09 5.5E-14 102.2 14.4 168 28-230 259-430 (459)
177 PRK15402 multidrug efflux syst 99.1 7E-09 1.5E-13 109.7 19.4 169 34-231 216-384 (406)
178 TIGR02718 sider_RhtX_FptX side 99.1 3.4E-09 7.3E-14 111.5 16.7 174 35-236 210-385 (390)
179 PF05977 MFS_3: Transmembrane 99.1 1.8E-09 3.8E-14 116.9 14.7 172 34-238 219-390 (524)
180 TIGR00895 2A0115 benzoate tran 99.1 1.4E-09 2.9E-14 114.0 13.4 147 34-214 251-397 (398)
181 PF03137 OATP: Organic Anion T 99.0 2.9E-11 6.3E-16 131.2 -0.4 202 37-246 7-254 (539)
182 TIGR00896 CynX cyanate transpo 99.0 4.3E-09 9.3E-14 109.1 15.9 156 33-221 197-353 (355)
183 KOG3762 Predicted transporter 99.0 1.8E-08 3.9E-13 104.8 19.9 140 374-550 409-549 (618)
184 TIGR00711 efflux_EmrB drug res 99.0 2.1E-09 4.5E-14 116.3 13.6 157 33-218 255-411 (485)
185 PRK10077 xylE D-xylose transpo 99.0 9.4E-09 2E-13 111.1 18.3 158 58-244 295-459 (479)
186 TIGR00887 2A0109 phosphate:H+ 99.0 5.4E-09 1.2E-13 113.8 15.9 174 41-245 296-491 (502)
187 PRK10054 putative transporter; 99.0 3.6E-09 7.8E-14 111.5 13.8 171 34-237 207-379 (395)
188 PRK14995 methyl viologen resis 99.0 3.9E-09 8.4E-14 114.7 13.9 154 33-216 259-412 (495)
189 PRK10213 nepI ribonucleoside t 99.0 2.1E-08 4.6E-13 105.7 19.1 168 33-234 216-383 (394)
190 KOG3098 Uncharacterized conser 99.0 5.2E-07 1.1E-11 94.7 28.7 103 75-211 56-158 (461)
191 TIGR00710 efflux_Bcr_CflA drug 99.0 1.1E-08 2.4E-13 106.9 15.5 162 34-225 207-369 (385)
192 PRK08633 2-acyl-glycerophospho 98.9 1.3E-08 2.9E-13 122.0 17.3 164 33-229 232-397 (1146)
193 COG2270 Permeases of the major 98.9 7.2E-09 1.6E-13 105.4 12.5 171 34-237 253-424 (438)
194 PRK10133 L-fucose transporter; 98.9 1.5E-08 3.3E-13 108.2 15.9 164 36-235 261-426 (438)
195 PRK15034 nitrate/nitrite trans 98.9 3.7E-08 8E-13 104.4 17.9 182 33-237 252-449 (462)
196 PRK11646 multidrug resistance 98.9 2.2E-08 4.7E-13 105.8 15.6 151 52-235 227-381 (400)
197 PF07690 MFS_1: Major Facilita 98.9 3.2E-09 6.8E-14 109.3 8.7 144 35-208 208-352 (352)
198 PRK06814 acylglycerophosphoeth 98.9 1.5E-08 3.2E-13 121.4 15.5 184 32-230 224-410 (1140)
199 TIGR00903 2A0129 major facilit 98.9 4.6E-08 1E-12 102.0 16.7 167 33-239 192-362 (368)
200 PRK11195 lysophospholipid tran 98.9 8.3E-08 1.8E-12 101.1 17.9 159 46-238 218-376 (393)
201 PF13347 MFS_2: MFS/sugar tran 98.8 1.3E-07 2.8E-12 100.9 18.6 163 32-220 224-387 (428)
202 PRK11102 bicyclomycin/multidru 98.8 7.4E-08 1.6E-12 100.6 16.0 149 34-212 195-344 (377)
203 PRK09848 glucuronide transport 98.8 4.2E-08 9.1E-13 105.2 14.2 163 33-220 228-391 (448)
204 KOG2532 Permease of the major 98.8 3.3E-08 7.1E-13 105.4 13.0 179 31-240 256-445 (466)
205 TIGR00901 2A0125 AmpG-related 98.8 5.4E-08 1.2E-12 100.9 13.5 145 34-201 210-355 (356)
206 TIGR00898 2A0119 cation transp 98.8 5.9E-08 1.3E-12 105.7 13.8 142 62-239 351-492 (505)
207 PF03825 Nuc_H_symport: Nucleo 98.8 2.4E-07 5.2E-12 97.4 17.5 177 35-239 209-392 (400)
208 PRK11043 putative transporter; 98.7 2.7E-07 5.7E-12 97.4 17.0 149 44-222 214-362 (401)
209 PRK10473 multidrug efflux syst 98.7 2.3E-07 4.9E-12 97.6 16.4 71 49-120 219-289 (392)
210 KOG2504 Monocarboxylate transp 98.7 8.2E-08 1.8E-12 103.6 12.5 176 33-242 298-476 (509)
211 KOG0569 Permease of the major 98.7 2E-07 4.3E-12 98.7 14.9 192 33-249 269-461 (485)
212 COG2807 CynX Cyanate permease 98.7 6.9E-07 1.5E-11 89.3 17.7 165 33-230 208-373 (395)
213 KOG0253 Synaptic vesicle trans 98.7 2.2E-07 4.7E-12 92.5 14.0 172 34-240 327-517 (528)
214 PRK10429 melibiose:sodium symp 98.7 4.5E-07 9.7E-12 98.0 16.9 166 32-220 230-396 (473)
215 KOG1330 Sugar transporter/spin 98.7 1.7E-08 3.7E-13 103.6 5.2 146 372-553 69-214 (493)
216 KOG4332 Predicted sugar transp 98.6 9.8E-07 2.1E-11 84.1 15.3 93 58-178 61-154 (454)
217 TIGR00886 2A0108 nitrite extru 98.6 2.1E-07 4.5E-12 96.6 11.9 141 34-204 226-366 (366)
218 PF01306 LacY_symp: LacY proto 98.6 2.8E-07 6E-12 95.7 12.4 180 31-243 218-401 (412)
219 PRK09669 putative symporter Ya 98.5 1.1E-06 2.4E-11 94.2 14.8 161 34-220 230-391 (444)
220 PRK11652 emrD multidrug resist 98.5 5E-06 1.1E-10 87.4 18.4 139 49-221 223-364 (394)
221 TIGR00885 fucP L-fucose:H+ sym 98.5 2E-06 4.3E-11 91.1 15.3 162 35-232 234-402 (410)
222 TIGR00880 2_A_01_02 Multidrug 98.5 2.1E-06 4.5E-11 75.2 13.0 133 378-547 5-137 (141)
223 KOG0637 Sucrose transporter an 98.5 1.6E-06 3.5E-11 89.0 13.5 166 33-214 32-202 (498)
224 TIGR00924 yjdL_sub1_fam amino 98.4 2.8E-06 6E-11 91.8 14.3 186 35-243 274-469 (475)
225 COG2211 MelB Na+/melibiose sym 98.4 5.8E-06 1.3E-10 86.9 15.1 162 33-220 236-399 (467)
226 PF06813 Nodulin-like: Nodulin 98.4 2E-05 4.3E-10 76.7 16.7 154 32-215 2-155 (250)
227 PF01770 Folate_carrier: Reduc 98.4 0.00014 3.1E-09 75.3 23.8 157 52-242 22-182 (412)
228 COG0477 ProP Permeases of the 98.4 1.1E-05 2.5E-10 79.9 15.6 152 47-230 16-173 (338)
229 KOG3764 Vesicular amine transp 98.3 1.1E-06 2.3E-11 88.7 7.5 148 370-554 105-253 (464)
230 PRK15403 multidrug efflux syst 98.3 1.6E-05 3.4E-10 84.4 16.6 169 33-232 218-387 (413)
231 PF03209 PUCC: PUCC protein; 98.3 1.8E-05 3.9E-10 81.1 14.9 171 39-238 214-394 (403)
232 PRK11462 putative transporter; 98.2 3E-05 6.6E-10 83.4 16.7 160 34-220 229-390 (460)
233 TIGR01301 GPH_sucrose GPH fami 98.2 2.3E-05 4.9E-10 83.9 14.4 206 29-245 254-474 (477)
234 TIGR00806 rfc RFC reduced fola 98.2 4.8E-05 1E-09 80.0 15.7 111 373-509 64-174 (511)
235 COG0738 FucP Fucose permease [ 98.2 3.1E-05 6.7E-10 78.8 13.8 156 34-225 237-392 (422)
236 PF02487 CLN3: CLN3 protein; 98.2 0.004 8.8E-08 64.6 29.3 61 448-508 334-394 (402)
237 PRK09584 tppB putative tripept 98.2 3.1E-05 6.7E-10 84.2 14.7 173 44-240 283-477 (500)
238 PRK10207 dipeptide/tripeptide 98.1 2.2E-05 4.9E-10 85.0 12.2 149 42-214 278-438 (489)
239 PF12832 MFS_1_like: MFS_1 lik 98.1 2.7E-05 5.8E-10 61.2 8.6 66 42-109 9-74 (77)
240 PF06963 FPN1: Ferroportin1 (F 98.0 0.027 5.8E-07 59.6 33.8 188 33-236 2-194 (432)
241 PRK15462 dipeptide/tripeptide 98.0 7.1E-05 1.5E-09 80.4 14.4 134 375-544 49-185 (493)
242 KOG3762 Predicted transporter 98.0 1.9E-05 4.2E-10 82.7 9.4 169 38-240 376-545 (618)
243 TIGR00788 fbt folate/biopterin 98.0 1.4E-05 3E-10 86.2 8.7 136 61-219 280-415 (468)
244 KOG2533 Permease of the major 98.0 3.4E-05 7.3E-10 82.8 11.1 165 33-229 273-443 (495)
245 PF00083 Sugar_tr: Sugar (and 98.0 7.1E-08 1.5E-12 103.4 -9.9 186 36-247 255-441 (451)
246 TIGR00805 oat sodium-independe 98.0 9.4E-05 2E-09 82.7 13.7 129 372-511 69-234 (633)
247 KOG3574 Acetyl-CoA transporter 97.9 0.0023 5.1E-08 64.6 21.5 158 29-211 27-189 (510)
248 PTZ00207 hypothetical protein; 97.8 0.00049 1.1E-08 75.5 16.5 129 388-549 78-206 (591)
249 KOG0252 Inorganic phosphate tr 97.8 4.4E-05 9.5E-10 78.7 7.6 179 33-241 304-497 (538)
250 TIGR00769 AAA ADP/ATP carrier 97.8 0.047 1E-06 58.4 30.6 165 31-215 5-189 (472)
251 PF06609 TRI12: Fungal trichot 97.8 0.00056 1.2E-08 74.7 15.7 138 373-548 80-217 (599)
252 KOG0254 Predicted transporter 97.8 0.00049 1.1E-08 75.2 15.0 195 31-246 292-487 (513)
253 KOG2615 Permease of the major 97.7 8.6E-05 1.9E-09 74.9 8.0 113 372-510 69-181 (451)
254 KOG2325 Predicted transporter/ 97.6 0.0008 1.7E-08 71.2 13.2 161 373-554 73-235 (488)
255 PF05978 UNC-93: Ion channel r 97.4 0.0043 9.4E-08 55.8 14.0 108 73-214 41-148 (156)
256 KOG0255 Synaptic vesicle trans 97.3 0.0011 2.4E-08 72.6 11.0 133 375-548 122-254 (521)
257 KOG2816 Predicted transporter 97.2 0.0011 2.5E-08 70.6 8.5 153 30-216 237-391 (463)
258 KOG2563 Permease of the major 97.2 0.0027 6E-08 65.7 10.8 185 34-247 267-455 (480)
259 PF06779 DUF1228: Protein of u 97.0 0.0069 1.5E-07 48.2 9.0 68 52-121 11-78 (85)
260 PRK03612 spermidine synthase; 96.7 0.06 1.3E-06 58.7 17.0 173 33-237 17-193 (521)
261 PF06813 Nodulin-like: Nodulin 96.7 0.016 3.4E-07 56.6 11.0 118 411-549 65-182 (250)
262 KOG3626 Organic anion transpor 96.4 0.022 4.7E-07 63.2 11.0 178 34-217 393-649 (735)
263 PF03137 OATP: Organic Anion T 96.1 0.0014 3E-08 71.7 0.0 179 33-217 305-514 (539)
264 PF06963 FPN1: Ferroportin1 (F 96.0 0.17 3.7E-06 53.5 14.9 154 34-211 259-412 (432)
265 COG3104 PTR2 Dipeptide/tripept 95.8 0.073 1.6E-06 56.3 10.7 181 34-237 285-482 (498)
266 TIGR00926 2A1704 Peptide:H+ sy 95.7 0.06 1.3E-06 60.2 10.7 93 443-548 559-651 (654)
267 PF03092 BT1: BT1 family; Int 95.0 0.27 6E-06 52.4 12.3 113 415-550 62-177 (433)
268 PF00854 PTR2: POT family; In 94.8 0.15 3.3E-06 53.1 9.7 116 415-547 4-122 (372)
269 KOG1479 Nucleoside transporter 94.6 6.7 0.00015 40.9 22.7 57 448-504 342-398 (406)
270 PF02487 CLN3: CLN3 protein; 94.6 0.16 3.5E-06 52.9 9.0 61 148-214 334-394 (402)
271 KOG3097 Predicted membrane pro 94.5 0.55 1.2E-05 47.1 11.8 116 29-179 25-140 (390)
272 KOG3098 Uncharacterized conser 93.8 1.1 2.3E-05 47.7 13.4 158 35-209 242-406 (461)
273 PF05978 UNC-93: Ion channel r 93.4 1.2 2.6E-05 40.1 11.2 62 448-509 88-149 (156)
274 PF13000 Acatn: Acetyl-coenzym 93.4 13 0.00029 39.8 26.3 63 449-511 405-467 (544)
275 KOG3810 Micronutrient transpor 92.9 0.96 2.1E-05 45.8 10.4 153 54-240 25-181 (433)
276 TIGR00939 2a57 Equilibrative N 92.8 15 0.00033 39.1 29.4 57 449-505 372-428 (437)
277 PF03219 TLC: TLC ATP/ADP tran 92.4 16 0.00034 39.6 19.9 166 31-216 22-205 (491)
278 TIGR00769 AAA ADP/ATP carrier 92.2 15 0.00033 39.5 19.4 58 453-510 132-190 (472)
279 PF05631 DUF791: Protein of un 92.1 14 0.0003 37.9 17.9 111 373-509 71-187 (354)
280 KOG0637 Sucrose transporter an 90.2 0.46 1E-05 49.8 5.3 181 29-219 275-472 (498)
281 PF07672 MFS_Mycoplasma: Mycop 89.4 4.9 0.00011 39.2 11.3 56 189-244 4-64 (267)
282 KOG4332 Predicted sugar transp 87.1 3.2 7E-05 40.6 8.3 140 70-236 283-425 (454)
283 KOG3880 Predicted small molecu 87.0 3.6 7.8E-05 41.1 8.7 57 449-505 342-398 (409)
284 TIGR00939 2a57 Equilibrative N 85.0 4.2 9E-05 43.4 8.9 57 148-210 371-427 (437)
285 COG0477 ProP Permeases of the 82.2 11 0.00024 36.4 10.3 63 448-510 93-157 (338)
286 PF01770 Folate_carrier: Reduc 79.2 89 0.0019 32.9 18.6 81 415-510 74-154 (412)
287 COG3202 ATP/ADP translocase [E 78.4 1E+02 0.0022 33.2 29.6 170 31-216 25-209 (509)
288 KOG3574 Acetyl-CoA transporter 76.7 18 0.00038 37.6 9.4 112 379-503 75-187 (510)
289 PRK03612 spermidine synthase; 75.5 46 0.00099 36.4 13.2 52 458-510 119-170 (521)
290 PF13000 Acatn: Acetyl-coenzym 70.5 59 0.0013 35.1 11.8 33 474-506 143-175 (544)
291 COG5336 Uncharacterized protei 68.4 45 0.00097 27.7 8.1 33 479-511 36-68 (116)
292 PF07857 DUF1632: CEO family ( 66.3 62 0.0013 31.7 10.4 28 481-508 75-102 (254)
293 KOG1479 Nucleoside transporter 66.2 16 0.00036 38.1 6.7 54 148-207 342-395 (406)
294 PF01733 Nucleoside_tran: Nucl 64.8 1.8 3.9E-05 43.9 -0.6 57 148-210 247-303 (309)
295 KOG4830 Predicted sugar transp 64.8 9.2 0.0002 37.3 4.2 66 36-103 20-94 (412)
296 COG5336 Uncharacterized protei 60.2 30 0.00064 28.7 5.7 39 76-114 49-87 (116)
297 PF01733 Nucleoside_tran: Nucl 58.7 3.3 7.2E-05 41.9 0.1 55 450-504 249-303 (309)
298 PF09527 ATPase_gene1: Putativ 55.3 48 0.001 23.7 5.7 37 76-112 7-43 (55)
299 KOG2601 Iron transporter [Inor 54.6 2.8E+02 0.006 29.1 16.4 38 465-502 402-439 (503)
300 TIGR02230 ATPase_gene1 F0F1-AT 49.8 54 0.0012 27.0 5.8 34 79-112 52-85 (100)
301 KOG1237 H+/oligopeptide sympor 48.2 1.1E+02 0.0023 34.0 9.7 67 144-216 453-519 (571)
302 PF12832 MFS_1_like: MFS_1 lik 47.8 38 0.00083 26.3 4.5 31 372-402 36-66 (77)
303 PF03219 TLC: TLC ATP/ADP tran 38.1 5.6E+02 0.012 27.8 20.9 43 468-510 163-205 (491)
304 COG4262 Predicted spermidine s 35.3 5.3E+02 0.012 26.8 12.7 107 44-176 21-132 (508)
305 PF07672 MFS_Mycoplasma: Mycop 28.0 3.3E+02 0.0071 26.8 8.3 44 148-195 203-246 (267)
306 PRK11469 hypothetical protein; 27.0 5.1E+02 0.011 24.0 10.1 78 31-117 104-182 (188)
307 KOG3810 Micronutrient transpor 25.7 1.9E+02 0.0042 29.8 6.4 98 70-198 272-369 (433)
308 PF07099 DUF1361: Protein of u 25.0 4.9E+02 0.011 23.6 8.5 40 53-92 39-84 (168)
309 PF02694 UPF0060: Uncharacteri 23.3 1.5E+02 0.0032 24.6 4.2 50 69-119 54-103 (107)
310 PRK10263 DNA translocase FtsK; 22.7 5.9E+02 0.013 31.2 10.4 17 203-219 143-159 (1355)
311 TIGR01666 YCCS hypothetical me 22.4 4.5E+02 0.0097 30.1 9.3 32 90-121 44-78 (704)
312 PRK02237 hypothetical protein; 22.2 2.1E+02 0.0045 23.9 4.9 50 69-119 56-105 (109)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-42 Score=368.28 Aligned_cols=542 Identities=46% Similarity=0.753 Sum_probs=477.3
Q ss_pred ccccccccCCCCcccc---cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhH
Q 008231 12 EAENVVDFRGNPVDRS---KTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLL 88 (573)
Q Consensus 12 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 88 (573)
++....+.++++..+. +++.|++...++..+.+++.++|++..++..|+.+.+|.+...+...+..+.......+++
T Consensus 13 ~~~~~~d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~ 92 (571)
T KOG1237|consen 13 HDFTSVDYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLL 92 (571)
T ss_pred cccceeeccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHH
Confidence 3334555555665554 7889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccc
Q 008231 89 GGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKS 168 (573)
Q Consensus 89 ~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~ 168 (573)
+++++|.|.||.+++.++.++..+|..+..+++..+.+.++.| .+...+..|+.+.......++.++.+.++|.|+..|
T Consensus 93 g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~ 171 (571)
T KOG1237|consen 93 GAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRP 171 (571)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCC
Confidence 9999999999999999999999999999999988898888887 333444578889988999999999999999999999
Q ss_pred cccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCcccccc
Q 008231 169 NVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFK 248 (573)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 248 (573)
+..++.+|++++..+.++..+...++++++..++|..++..+..++.++.||.+.|.++.+.++++.++++...+.++.+
T Consensus 172 ~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~ 251 (571)
T KOG1237|consen 172 CLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYK 251 (571)
T ss_pred cchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEee
Confidence 99999999999777666666779999999999999999999999999999999999999999999999989999999988
Q ss_pred CCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhccc--ccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHH
Q 008231 249 KPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQN--AKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVE 326 (573)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (573)
++.+++.+.+.+++..+.++++.+.+..+.......+ ....+.+..++++++...............+|+.|...+++
T Consensus 252 ~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Ve 331 (571)
T KOG1237|consen 252 KPRGSPKTRIGQVLVAAAFKRKAVVSLDPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVE 331 (571)
T ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCcchhccccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehh
Confidence 8999999999999999999888877766444412111 22233566788888887643322223456789999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhcccccccc-ceecccccchhhHHHHHHHHHhhhhhhhhhhcccccc
Q 008231 327 EVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGS-FTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHS 405 (573)
Q Consensus 327 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~ 405 (573)
+.|.+++.+++|...+.++..+.|+.+++..|...++++.++ +.+|++.++.+..+..++..|+++++..|+.||..++
T Consensus 332 e~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~ 411 (571)
T KOG1237|consen 332 EVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGN 411 (571)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCC
Confidence 999999999999999999999999999999999999999986 9999999999999999999999999999999999886
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---CCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchh
Q 008231 406 IQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQ---KHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERM 482 (573)
Q Consensus 406 ~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~---~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 482 (573)
..+.+.++++.+|+++..+++...+..+..+.+.+.+ ...+++++|++++++++|+++.+......++..+.+|+++
T Consensus 412 ~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM 491 (571)
T KOG1237|consen 412 PFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM 491 (571)
T ss_pred CCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH
Confidence 6678999999999999999999999999887666542 2367899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--ccCccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 008231 483 KSMSTGLFLSAISMGMFVSSMLVSIVDKIT--NKHWLR-SNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYN 554 (573)
Q Consensus 483 rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~--~~~w~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 554 (573)
|+.+++++.+..++|+.++.+++..+...+ .++|++ +++|.+++..+||+++....+....+....++++++
T Consensus 492 kS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~ 566 (571)
T KOG1237|consen 492 KSVATALWLLTVAVGNYLSSVLVSLVQFSTGKAAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYK 566 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeec
Confidence 999999999999999999999999998877 358999 999999999999999999999988877776665554
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-38 Score=321.04 Aligned_cols=460 Identities=22% Similarity=0.317 Sum_probs=351.9
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC----CCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHH
Q 008231 28 KTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLH----LSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTV 103 (573)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~ 103 (573)
..+++|.++.++.+++.|+++||++...+..|+..+++ +|++++.-+.+.|....++.++++||++||++|+|+++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 34577899999999999999999999999999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCc
Q 008231 104 AIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDP 183 (573)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~ 183 (573)
..|.++.++|.++++..+. .....++++.+++++|.|.++|+..++++|++|++++
T Consensus 96 ~lGail~~iGh~~L~~~~~------------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp 151 (498)
T COG3104 96 VLGAILMAIGHLVLAISSV------------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP 151 (498)
T ss_pred HHHHHHHHHHHHHHhcccc------------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc
Confidence 9999999999999987530 1345899999999999999999999999999999998
Q ss_pred hHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccC--CCCCchh-----
Q 008231 184 KEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKK--PRGSPLT----- 256 (573)
Q Consensus 184 ~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----- 256 (573)
+ |..+++++|++.|+|+.++|++.+++.+++||+..|.++++.+.++++.++..+++..... ++..+.+
T Consensus 152 r----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~ 227 (498)
T COG3104 152 R----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLL 227 (498)
T ss_pred c----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhh
Confidence 7 9999999999999999999999999999999999999999999999888877776554332 1111110
Q ss_pred -HHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchh-hhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH
Q 008231 257 -VIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCL-DKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL 334 (573)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (573)
.....+......- +.. ....+..... ....+......-.+ ...+ .+.. +++|+++..
T Consensus 228 ~~~~~~~~~~~~~~----------~~~-----~l~~~~~~~~~~~~~i~~~~~~~~~--~~~~---~~~~-~er~r~~~~ 286 (498)
T COG3104 228 PVLGGLVVMILAAL----------LTL-----LLNQNTFSGVLLVISILIAIIYFAE--AFRS---PKVF-DERRRLLAA 286 (498)
T ss_pred hhHHHHHHHHHHHH----------HHH-----HHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc---CccH-HHHHHHHHH
Confidence 0000000000000 000 0000000000 00000000000000 0111 2223 678889999
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhc-cccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHH
Q 008231 335 LPIWATCILFWTVYSQMTTFTVEQATF-MNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQ 413 (573)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 413 (573)
+++++...++|..+.|+.+.+..+..+ .+++..++++++++.+++|++.+++++|++++++.|+.++.. .++...
T Consensus 287 ~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~----~ps~~~ 362 (498)
T COG3104 287 IPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNK----QPSTPI 362 (498)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCC----CCCcch
Confidence 999999999999999999977766543 345545689999999999999999999999999988776652 367788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHH
Q 008231 414 RVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSA 493 (573)
Q Consensus 414 ~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~ 493 (573)
++..|+++++.+++++......... +..+.+.+|+++.++++++||.+.+|...+++++.+|++..+..++++...
T Consensus 363 KFalGl~l~g~~fl~l~~~~~~~~~----~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt 438 (498)
T COG3104 363 KFALGLILAGLGFLILLLAGIWFGG----PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLT 438 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC----CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 8999999999999998887443221 245678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 494 ISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMK 550 (573)
Q Consensus 494 ~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 550 (573)
...|+.++..+.+...+.. +..+......+|+.++...++..+......+.
T Consensus 439 ~a~~~~l~g~va~~~~~~~------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~ 489 (498)
T COG3104 439 VAAGQTLGGQVAGLTAVTD------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPK 489 (498)
T ss_pred HHHHHHhhceecccccccc------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 9999999888877321100 00011223457888888888777776666554
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=5.8e-35 Score=314.29 Aligned_cols=461 Identities=17% Similarity=0.209 Sum_probs=327.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
.+++|.++.+++.++.+++++|++.++++.|+++++|++..+++++.+.+....++..+++|+++||++||||+++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 35888999999999999999999999999999999999999999999999999999999999999993399999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+++++.++++++.+ ....++++|+++|+|.|...|+..++++|++|+++++
T Consensus 90 ~~~~g~~~~~~~~~-------------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~---- 140 (489)
T PRK10207 90 VLAIGYFMTGMSLL-------------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR---- 140 (489)
T ss_pred HHHHHHHHHHHhcc-------------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----
Confidence 99999999988642 1224668899999999999999999999999987632
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCcccccc--CCCCCchh--HHHH----
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFK--KPRGSPLT--VIWR---- 260 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~---- 260 (573)
|++++++++++.|+|..+||.+++++.+..||++.|++..+.++++.+.+...++..++. ++++++.+ ....
T Consensus 141 ~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~ 220 (489)
T PRK10207 141 LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLG 220 (489)
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHH
Confidence 788999999999999999999999999999999999987665555555544444333222 12121111 1000
Q ss_pred HH--HHHHhccCCCCCCCCCcchhcccccCCCCCccchh-hhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHH
Q 008231 261 VL--LLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCL-DKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPI 337 (573)
Q Consensus 261 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 337 (573)
.. ......... . .+..... ...........-.++ .+.+.. .+++.+....+
T Consensus 221 ~~~~~~~~~~~~~-~-----------------~~~~~~~~~~~~~i~~~~f~~~~-------~~~~~~-~r~r~~~~~~l 274 (489)
T PRK10207 221 SVVMIFVCAWLMH-N-----------------VEVANLVLIVLSIVVTIIFFREA-------FKLDKT-GRNKMFVAFVL 274 (489)
T ss_pred HHHHHHHHHHHHh-h-----------------hhHHHHHHHHHHHHHHHHHHHHH-------hcCCHH-HHHHHHHHHHH
Confidence 00 000000000 0 0000000 000000000000000 011112 23344445556
Q ss_pred HHHHHHHHHHhhcccchhhhhhh-ccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHH
Q 008231 338 WATCILFWTVYSQMTTFTVEQAT-FMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVG 416 (573)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 416 (573)
++....+|..+.|....+..+.. ..+....++.+++.++++++++..++..|+.+++.+|..+|.. .++...++.
T Consensus 275 ~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~----~~~~~~k~~ 350 (489)
T PRK10207 275 MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK----DLSMPMKFT 350 (489)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC----CCCcHHHHH
Confidence 77788888989888765555443 3555556778888899999999998999999998777665543 367888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHH
Q 008231 417 TGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISM 496 (573)
Q Consensus 417 ~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~l 496 (573)
.|+++.+++++.++........ .....+.+|+++.+++.++||.+.+|..++++.+.+|++.+|.++|++++.+.+
T Consensus 351 ~G~~l~~~~~~~~~~~~~~~~~----~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i 426 (489)
T PRK10207 351 LGMFLCSLGFLTAAAAGMWFAD----AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA 426 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC----CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 9999999998766543211110 112356788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 008231 497 GMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYN 554 (573)
Q Consensus 497 g~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 554 (573)
|+.++..+........+ ..-+. .....+..+|..+++.++++.+++++..+..++.
T Consensus 427 g~~lg~~l~~~~~~~~~-~~~~~-~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 427 AFLLGGYVATFTAVPDN-ITDPL-ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHhccccc-cccch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998876632100 00000 0112345678888888888877777766654443
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2e-34 Score=309.85 Aligned_cols=451 Identities=19% Similarity=0.218 Sum_probs=325.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCchhhhHHHHHHHHHHHHHHhHHHHHhhh-ccchhHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGD--LHLSSAKSATIVTNFMGTLNLLGLLGGFLADA-KLGRYLTVAI 105 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr-~~Grr~~~~~ 105 (573)
.++++.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.+...++++++|+++|| + |||+++.+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~-G~~~~l~~ 84 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVW-GTKKTMVL 84 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhc-chHHHHHH
Confidence 45777899999999999999999999999999987 99999999999999999999999999999999 6 99999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchH
Q 008231 106 FASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKE 185 (573)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
+..+.+++.++++++. +.+.++++|++.|+|.|...|+..++++|++|+++++
T Consensus 85 ~~~~~~~g~~~~~~~~--------------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~- 137 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSI--------------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP- 137 (475)
T ss_pred HHHHHHHHHHHHHhcc--------------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc-
Confidence 9999999998888753 3557788999999999999999999999999876521
Q ss_pred HHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHH----H-
Q 008231 186 EKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIW----R- 260 (573)
Q Consensus 186 ~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 260 (573)
.|++++++++++.|+|..+||.+++++.+.+||++.|.+.++.++++.+.+....+.+++.++++++.+... +
T Consensus 138 --~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (475)
T TIGR00924 138 --RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKL 215 (475)
T ss_pred --cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHH
Confidence 188899999999999999999999999998999999998887666665555554444332222111111000 0
Q ss_pred ------HHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH
Q 008231 261 ------VLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL 334 (573)
Q Consensus 261 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (573)
.+....+.... .... ...+........... .....+.. .+ ..+.. ++++....
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~--~~~~~~~~-~~----~~~~~-~~~~~~~~ 274 (475)
T TIGR00924 216 LLALLAALALVFFCAWL-MHHV------------VIANILLMTVTLAVI--IFFFRLAF-KP----RLDAV-ARNKMYAY 274 (475)
T ss_pred HHHHHHHHHHHHHHHHH-Hhcc------------HHHHHHHHHHHHHHH--HHHHHHHH-hc----cCCHH-HHhHHHHH
Confidence 00000000000 0000 000000000000000 00000000 00 01111 22333446
Q ss_pred HHHHHHHHHHHHHhhcccchhhh-hhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHH
Q 008231 335 LPIWATCILFWTVYSQMTTFTVE-QATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQ 413 (573)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 413 (573)
+.+++....+|..+.|..+.+.. +...++.+.+++.++.++++++|++..++..|+.+++..+..||.. +++...
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~----~~~~~~ 350 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGK----DPTTPL 350 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCC----CCCcHH
Confidence 67888888999999998885543 3344666667788999999999999999999998887655555421 246666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHH
Q 008231 414 RVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSA 493 (573)
Q Consensus 414 ~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~ 493 (573)
++..|+++.+++++.+.+..... + .....+++|+++.+++.++||.+..|..++++.+.+|++.||+++|++.+.
T Consensus 351 k~~~G~~l~~~~~~~~~~~~~~~-~----~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~ 425 (475)
T TIGR00924 351 KFTLGMLFCGASFLTFAASIWFA-D----AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLA 425 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-C----CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 78999999999998887652211 1 223468899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 008231 494 ISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKH 551 (573)
Q Consensus 494 ~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 551 (573)
..+|+.+++.+.....+. .+...+|..+++++++..+++++..|..
T Consensus 426 ~~~g~~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 426 QAMGSLLGGYLATFGAVP------------QGVTGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHHHHHHHHHHHHhcc------------cchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988766432 1123566677777777777666665543
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=5.1e-34 Score=302.69 Aligned_cols=422 Identities=20% Similarity=0.231 Sum_probs=306.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+++.++.+++.++.+++++|++..+++.|+++++|++..+++.+.+.+.....++++++|+++||+.||||++.++.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999999999999999999779999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++.++++...+ +...++++..+.++|.|...++..++++|.+|+++++ |.
T Consensus 87 ~lg~lll~~~~~-------------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~ 137 (493)
T PRK15462 87 AIGHVVLGASEI-------------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RD 137 (493)
T ss_pred HHHHHHHHHhhc-------------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----cc
Confidence 999877764311 1123455556667888888898899999999987533 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCC-CCCchh--HHHH----HHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKP-RGSPLT--VIWR----VLL 263 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~----~~~ 263 (573)
+++++++.+.|+|+.++|.+.+++.+.+||++.|.+.++.++++.+.+....+...+... +.++.+ .... .+.
T Consensus 138 sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (493)
T PRK15462 138 GGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLL 217 (493)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999998877776666665554443322110 111110 0000 000
Q ss_pred HHHhccCCCCCCCCCcchhcccccCCCCCccchh-hhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHH
Q 008231 264 LAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCL-DKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCI 342 (573)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 342 (573)
...-.. + .+... ... .+..... ...........- +........++++++...+.+++..+
T Consensus 218 ~~~~~~----~----~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~er~r~~~~~~l~~~~~ 278 (493)
T PRK15462 218 VLLVAT----P----ALITV---LFW-KEWSVYALIVATIIGLGVLA-------KIYRKAENQKQRKELGLIVTLTFFSM 278 (493)
T ss_pred HHHHHH----H----HHHHH---HHH-HHHHHHHHHHHHHHHHHHHH-------HHHHhcCCHHHHhhHHHHHHHHHHHH
Confidence 000000 0 00000 000 0000000 000000000000 00000112245677788888999999
Q ss_pred HHHHHhhcccchhhhhh-hccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHH
Q 008231 343 LFWTVYSQMTTFTVEQA-TFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIF 421 (573)
Q Consensus 343 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~ 421 (573)
++|..+.|.++.+.... .+.+++++++.+|+.+++++|++.+++.+|+..+++.+..||. +.++...|+..|+++
T Consensus 279 ~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~----~~~s~~~Kfa~g~~~ 354 (493)
T PRK15462 279 LFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGN----RTVRIWGKFALGLGL 354 (493)
T ss_pred HHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCC----CCCCcHHHHHHHHHH
Confidence 99999999998655443 5678888899999999999999999999999999976654332 136788889999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHH-HHHHHH
Q 008231 422 SVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAI-SMGMFV 500 (573)
Q Consensus 422 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~-~lg~~i 500 (573)
++++++++.+...... +....+.+|++..++++++||.+.+|...+.+++.+|++.+|..+|++.... .+|+.+
T Consensus 355 ~g~~f~~l~~~~~~~~-----~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~ 429 (493)
T PRK15462 355 MSAGFCILTLSARWSA-----MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYL 429 (493)
T ss_pred HHHHHHHHHHHHhhcC-----CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998877542210 1234688899999999999999999999999999999999999999997744 688888
Q ss_pred HHHHHHHHh
Q 008231 501 SSMLVSIVD 509 (573)
Q Consensus 501 g~~~~~~i~ 509 (573)
++.+.+...
T Consensus 430 ~g~~~~~~~ 438 (493)
T PRK15462 430 AGVIADQTS 438 (493)
T ss_pred HHHHHHHhc
Confidence 877776653
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=6.9e-33 Score=299.65 Aligned_cols=458 Identities=19% Similarity=0.263 Sum_probs=321.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
.++.+.++.++..++++++++|++..+++.|+++++|++..+++++.+.+.......++++|+++||++|||+++.++..
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 45667899999999999999999999999999999999999999999888877778788999999993399999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+.+++..+++++.+ +...++++|+++|+|.|...++..+++.|++|+++++
T Consensus 97 ~~~ig~~l~~~~~~-------------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~---- 147 (500)
T PRK09584 97 VLAIGYALVAWSGH-------------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR---- 147 (500)
T ss_pred HHHHHHHHHHHhcc-------------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----
Confidence 99999888887531 3346778899999999999999999999999876532
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCcccccc--CCCCCchhHH--H----H
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFK--KPRGSPLTVI--W----R 260 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~----~ 260 (573)
|.+++++++++.++|+.+||.+++++.+.+||++.|.+.++..+++.+.+.+..+..++. +++.++.+.. . .
T Consensus 148 ~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (500)
T PRK09584 148 LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVG 227 (500)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHH
Confidence 667899999999999999999999999999999999988776666554443333222221 1211111110 0 0
Q ss_pred HHHHHH-hccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHH
Q 008231 261 VLLLAW-KKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWA 339 (573)
Q Consensus 261 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 339 (573)
...... .......++.. + ................+ .+ ..++ .++++.+..+.+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~~~~----~~---~~~~-~~~~~~~~~~~~~~ 283 (500)
T PRK09584 228 VVALIAIATWLLHNQEIA--------------R--MALGVVALGIVVIFGKE----AF---AMKG-AARRKMIVAFILML 283 (500)
T ss_pred HHHHHHHHHHHHhcchHH--------------H--HHHHHHHHHHHHHHHHH----Hh---hcCH-HHHHHHHHHHHHHH
Confidence 000000 00000000000 0 00000000000000000 00 1111 23445555566778
Q ss_pred HHHHHHHHhhcccchhhhhhh-ccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHH
Q 008231 340 TCILFWTVYSQMTTFTVEQAT-FMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTG 418 (573)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g 418 (573)
..+.+|..+.|.+..+..+.. +.++...++.++.+++++++++..++..|+.+++..+..+| .+..+++..|
T Consensus 284 ~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~~~~~~G 356 (500)
T PRK09584 284 EAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMPHKFAIG 356 (500)
T ss_pred HHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcHHHHHHH
Confidence 888899999999998776553 34555667788899999999999999999998886555444 3467789999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHH
Q 008231 419 LIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGM 498 (573)
Q Consensus 419 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~ 498 (573)
+++++++++.+........ .....+.+|+++.+++.++||.+.+|...+++.+.+|++.||+++|++.+...+|+
T Consensus 357 ~~l~~l~f~~l~~~~~~~~-----~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~ 431 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFAN-----DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAA 431 (500)
T ss_pred HHHHHHHHHHHHHHHHhcC-----CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999998877532110 12345677899999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhhhhccCcccccc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhcchh
Q 008231 499 FVSSMLVSIVDKITNKHWLRSNL-NKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYN 554 (573)
Q Consensus 499 ~ig~~~~~~i~~~~~~~w~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 554 (573)
.+++.+.+...... -..+.. ..+.+..+|..+++++++.+++++...+..++.
T Consensus 432 ~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 432 LIAGYVANLMAVPD---NVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHhcccc---ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888876543110 000000 112245677777777776666666666654444
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=3.8e-26 Score=240.24 Aligned_cols=376 Identities=11% Similarity=0.058 Sum_probs=249.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
+++|..++.+.+..+......+...+.+ +.+.+++|.|..+.+++.+.+.+++.++.++.|+++||+ |||+++..+..
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 82 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFV 82 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHH
Confidence 3455566777776666555554333333 567889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+.+++.+++.+++ +++.++++|+++|++.+...+...+++.|++|+++
T Consensus 83 ~~~~~~~~~~~~~--------------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------ 130 (390)
T PRK03545 83 LFIASHVLSALAW--------------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------ 130 (390)
T ss_pred HHHHHHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------
Confidence 9999999988863 67889999999999999888888999999999888
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhc
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKK 268 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
|+++++++..+.++|..++|++++.+.+..|||++|++.++..++..+......|+.+++ ++++.++
T Consensus 131 r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~----------- 197 (390)
T PRK03545 131 KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HSGSLKS----------- 197 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CcchHHH-----------
Confidence 999999999999999999999999999989999999988776655544433333321110 0000000
Q ss_pred cCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHh
Q 008231 269 RSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVY 348 (573)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 348 (573)
.....++.+........++.....+...
T Consensus 198 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (390)
T PRK03545 198 ----------------------------------------------------LPLLFRRPALVSLYLLTVVVVTAHFTAY 225 (390)
T ss_pred ----------------------------------------------------HHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 0000001111111111111122222222
Q ss_pred hcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 008231 349 SQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIV 428 (573)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~ 428 (573)
...+.++. ...+.+ ....+.+.....++.++...+.+++.||..+| .+..+..+..++...
T Consensus 226 ~~~~~~l~-~~~g~s------~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------------~~~~~~~~~~~~~~~ 286 (390)
T PRK03545 226 SYIEPFVQ-QVAGLS------ENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG------------FLLIAIALLLVCLLL 286 (390)
T ss_pred HHHHHHHH-HhcCCC------ccHHHHHHHHHHHHHHHHHHHHHHHhhccchh------------HHHHHHHHHHHHHHH
Confidence 22222211 111111 11233344445555666666666665443222 134444444444433
Q ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 429 SAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
+... ..+.+.+++..++.|++.....+.....+.+..| +.|++++|+++....+|..+|+.+.|.+
T Consensus 287 l~~~-------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~ 352 (390)
T PRK03545 287 LLPA-------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQV 352 (390)
T ss_pred HHHH-------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221 1134455566777888877777777778888877 5789999999999999999999999998
Q ss_pred hhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008231 509 DKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFA 548 (573)
Q Consensus 509 ~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 548 (573)
.+.. ++...|+..+++.+++.++.+...
T Consensus 353 ~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 353 SLHL------------GLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred Hhcc------------ChhHHHHHHHHHHHHHHHHHHHHc
Confidence 8643 234567777777777777665554
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=4e-25 Score=233.13 Aligned_cols=376 Identities=12% Similarity=0.028 Sum_probs=249.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
+.++.+..++...++..++.....+.+|.|+.+++|+|..+.+++.+.+.++..+++++.|+++||+ ||||++..+.++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCG 90 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHH
Confidence 3446777788888888888888888999999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
.+++...+.++...... ...+...+++.|+++|++.+...+...+++.|++|+++ |
T Consensus 91 ~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r 146 (399)
T PRK05122 91 CALSGLLYLLAGLLAAW------------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------T 146 (399)
T ss_pred HHHHHHHHHHhhhhhcc------------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------h
Confidence 88877666553210100 00256688999999999999999998899999999888 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhcc
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKR 269 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
++++++...+.++|..+||.+++++.+..||++.+++..+..++..+. . .+. ++.++++++
T Consensus 147 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~~~~~--------------- 207 (399)
T PRK05122 147 GRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL--A-RPR-PAVPPVKGE--------------- 207 (399)
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH--H-hcC-CCCCCCCcc---------------
Confidence 999999999999999999999999999999999887665543332222 1 111 110000000
Q ss_pred CCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHHHHHHh
Q 008231 270 SHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCILFWTVY 348 (573)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~ 348 (573)
+. ++ . . ..+..... ....+....+....
T Consensus 208 -----------------------~~---------------------~~---~-~---~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
T PRK05122 208 -----------------------RL---------------------PF---R-R---VLGRVWPYGMGLALASIGFGTIA 236 (399)
T ss_pred -----------------------ch---------------------hH---H-H---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0 0 00000000 00111111111111
Q ss_pred hcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 008231 349 SQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIV 428 (573)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~ 428 (573)
...+.++... +.. ..+.......++.++.....+++.+|..+| +.+..+.++.+++++.
T Consensus 237 ~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~~~~~~~~~~~~ 295 (399)
T PRK05122 237 TFITLYYAAR--GWD--------GAALALTLFGVAFVGARLLFGNLINRLGGL-----------RVAIVSLLVEILGLLL 295 (399)
T ss_pred HHHHHHHHHc--ccc--------cchHHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHH
Confidence 1111111110 110 112223334444555556666665544332 2255566666666655
Q ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 429 SAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
+.... +.+..++..++.|++.+...|.......+..|++.||++.|+++....+|..+++.+.|.+
T Consensus 296 ~~~~~--------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 361 (399)
T PRK05122 296 LWLAP--------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLV 361 (399)
T ss_pred HHHhc--------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54421 3334556678888888888888777788899999999999999999999999999999988
Q ss_pred hhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 008231 509 DKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFF 547 (573)
Q Consensus 509 ~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 547 (573)
.+.. ++...+++.+++++++.+..+++
T Consensus 362 ~~~~------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 362 ASWF------------GYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHc------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 7532 23456666676666665554443
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.5e-25 Score=223.75 Aligned_cols=379 Identities=15% Similarity=0.113 Sum_probs=267.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
+..+..++.+..+.|.....=+.....+ +.+.+++|.|..++|+.++.|.++..++.|+...+.||+ .||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLL-p~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLL-PPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhch-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 4556678888888888777766665555 567889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
++.++.++++++ +++..++++|++.|+..|.+.+...++.++..|+++
T Consensus 87 lFi~~n~l~alA--------------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------ 134 (394)
T COG2814 87 LFIVSNLLSALA--------------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------ 134 (394)
T ss_pred HHHHHHHHHHHh--------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------
Confidence 999999999998 478899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhc
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKK 268 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
|+++.++...+..++.++|.+++.++.+.+|||++|++.+...+++++..+...|+....++.+.+..+..
T Consensus 135 ~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~--------- 205 (394)
T COG2814 135 RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLL--------- 205 (394)
T ss_pred hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHH---------
Confidence 99999999999999999999999999999999999999888888877776666661000000001000000
Q ss_pred cCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHh
Q 008231 269 RSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVY 348 (573)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 348 (573)
...++.+....+...++.....|..|
T Consensus 206 ------------------------------------------------------~~l~~p~v~~~l~~t~l~~~g~F~~f 231 (394)
T COG2814 206 ------------------------------------------------------RLLRRPGVLLGLLATFLFMTGHFALY 231 (394)
T ss_pred ------------------------------------------------------HHhcCchHHHHHHHHHHHHcchhhhH
Confidence 00111122233333444444445554
Q ss_pred hcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 008231 349 SQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIV 428 (573)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~ 428 (573)
+...+++... .+++.+ ..+++.....++.++...+.+++.||..+ +.+.....+.++.++.
T Consensus 232 tYi~P~L~~v-~g~s~~------~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~------------~~l~~~~~l~a~~~l~ 292 (394)
T COG2814 232 TYIRPFLESV-AGFSVS------AVSLVLLAFGIAGFIGNLLGGRLADRGPR------------RALIAALLLLALALLA 292 (394)
T ss_pred HhHHHHHHHc-cCCCHh------HHHHHHHHHHHHHHHHHHHHhhhccccch------------hHHHHHHHHHHHHHHH
Confidence 4444333221 122211 23444555566666667777777554111 2245555666666666
Q ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 429 SAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
+.+.. .+.+..+...++++++.....+..+....+..| +.++.+.+++....++|..+|..++|.+
T Consensus 293 l~~~~-------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~~~~a~sl~~aa~nlgia~GA~lGG~v 358 (394)
T COG2814 293 LTFTG-------------ASPALALALLFLWGFAFSPALQGLQTRLARLAP-DAADLAGSLNVAAFNLGIALGAALGGLV 358 (394)
T ss_pred HHHhc-------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55542 123344445555666666555555555555444 6699999999999999999999999999
Q ss_pred hhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 008231 509 DKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAM 549 (573)
Q Consensus 509 ~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 549 (573)
.+.. ++....++.+++.+++.++.+...+
T Consensus 359 ~~~~------------g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 359 LDAL------------GYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHhh------------chHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8742 2345566777777776666555443
No 10
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=6.9e-25 Score=230.78 Aligned_cols=375 Identities=10% Similarity=-0.013 Sum_probs=245.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.+.++.+.++.++...+.....+.+|.|+.+++|+|..+.+++.+.+.+...+++++.|+++||+ ||||++..+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHH
Confidence 34667777777888888888888899999999999999999999999999999999999999998 99999999988777
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++.+........+. ....+.+.++++|+++|++.+...+...+++.|.+|+++ |++
T Consensus 93 ~~~~~~~~~~~~~~------------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 148 (392)
T PRK12382 93 LAGLAYLLAAILPV------------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGK 148 (392)
T ss_pred HHHHHHHhhhcccc------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cch
Confidence 66543322211110 001367789999999999999888888889999999888 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCC
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSH 271 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (573)
++++++.+.++|..++|.+++++.+.+||++.+.+..+..++.... ....| +.+++++.
T Consensus 149 a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~----------------- 207 (392)
T PRK12382 149 VMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF-NGTVR---KVPAHAGE----------------- 207 (392)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-HHhcc---CCCCCccc-----------------
Confidence 9999999999999999999999998899998776554433222211 11111 11100000
Q ss_pred CCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcc
Q 008231 272 PYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQM 351 (573)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 351 (573)
.+ +..+. + + ... .... ...+....+.......
T Consensus 208 -------------------~~--~~~~~-----------------~---~--~~~-~~~~----~~~l~~~~~~~~~~~~ 239 (392)
T PRK12382 208 -------------------RP--SLWSV-----------------V---G--LIW-KPGL----GLALQGVGFAVIGTFV 239 (392)
T ss_pred -------------------Cc--hHHHH-----------------H---H--HHH-HhHH----HHHHHHHHHhHHHHHH
Confidence 00 00000 0 0 000 0000 0111111111111111
Q ss_pred cchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHH
Q 008231 352 TTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAV 431 (573)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~ 431 (573)
+.++ .+. +.. ..+.......++.++..++.+++.+|..+|+. +..+..+..++++.+..
T Consensus 240 ~~~~-~~~-~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-----------~~~~~~~~~~~~~~~~~ 298 (392)
T PRK12382 240 SLYF-ASK-GWA--------MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-----------AIVSLLVETVGLLLLWL 298 (392)
T ss_pred HHHH-Hhc-CCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-----------hHHHHHHHHHHHHHHHH
Confidence 1111 110 110 11222333444455566677777665544422 45566666666555443
Q ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008231 432 IEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~ 511 (573)
. .+.+...+..++.+++.+...|...+...+..|++.||++.|++++...+|+.+++.+.+.+.+.
T Consensus 299 ~--------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 364 (392)
T PRK12382 299 A--------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS 364 (392)
T ss_pred c--------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 13344555667888888888888888888999999999999999999999999999999998764
Q ss_pred hccCccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 008231 512 TNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFF 547 (573)
Q Consensus 512 ~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 547 (573)
.+ +...|++.+++.+++.++.+..
T Consensus 365 ~g------------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 365 FG------------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred hC------------chHHHHHHHHHHHHHHHHHHhh
Confidence 31 3456677777666666655443
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.95 E-value=5.1e-25 Score=232.38 Aligned_cols=347 Identities=13% Similarity=0.080 Sum_probs=235.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
++++...++...+++.+.++++.|+++++|+|..+.|++.+.+.+...+..+++|+++||+ |||+++.++..+.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 7778889999999999999999999999999999999999999999999999999999998 999999999999999998
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
++.+++ +.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++
T Consensus 92 ~~~~~~--------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~ 139 (400)
T PRK11646 92 TMAIAH--------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSL 139 (400)
T ss_pred HHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHH
Confidence 887752 56788899999999998888888999999999887 9999999
Q ss_pred HHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCC
Q 008231 196 FYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPD 275 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (573)
.+...++|..+||.+++++. .+||+++|++.++..++..+...+..|+.+.+ +..++..
T Consensus 140 ~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~------------------- 198 (400)
T PRK11646 140 LMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-TVRTPVR------------------- 198 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-ccchhhH-------------------
Confidence 99999999999999999998 68999999988776655544333333321100 0000000
Q ss_pred CCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHH-HHHHHHHHHHHHhhcccch
Q 008231 276 HPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLL-PIWATCILFWTVYSQMTTF 354 (573)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 354 (573)
+ .+ . ...++ +...... ..+.............+ .
T Consensus 199 ----------------------~-----------------~~---~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p-~ 233 (400)
T PRK11646 199 ----------------------E-----------------GM---T-RVLRD-KRFVTYVLTLTGYYMLAVQVMLMLP-I 233 (400)
T ss_pred ----------------------H-----------------HH---H-HHHcC-chHHHHHHHHHHHHHHHHHHHHhhh-h
Confidence 0 00 0 00001 1111111 11111111111111111 1
Q ss_pred hhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 355 TVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQ 434 (573)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~ 434 (573)
+..+..+ + ....+.+.++..+..+......++..+ +|. +..+.+..+.++.+++++.+....
T Consensus 234 ~~~~~~~-~------~~~~g~l~~~~~~~~~~~~~~~~~~~~---~r~-------~~~~~~~~~~~~~~~~~~~l~~~~- 295 (400)
T PRK11646 234 MVNDIAG-S------PSAVKWMYAIEACLSLTLLYPIARWSE---KRF-------RLEHRLMAGLLIMSLSMFPIGMVS- 295 (400)
T ss_pred hHHhhcC-C------chHHHHHHHHHHHHHHHHHHHHHHHHH---Hhc-------chhHHHHHHHHHHHHHHHHHHHhh-
Confidence 1111101 0 111223333333333322222233322 111 122235666666666666554431
Q ss_pred HHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008231 435 QRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKIT 512 (573)
Q Consensus 435 ~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~ 512 (573)
+.++++...++.+++.+...|...+++.+.+|++.||+++|+++....+|+.+|+.+.|.+.+.+
T Consensus 296 -------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 296 -------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 23344445567788888888898999999999999999999999999999999999999998753
No 12
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.95 E-value=7.5e-25 Score=237.52 Aligned_cols=402 Identities=12% Similarity=0.030 Sum_probs=249.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
++|..+..+++..++...+...+... .+.+.+++|.+..+.+|+.+.|.++..++.+++|+++||+ |||+++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a-~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~ 80 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVA-APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTL 80 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 45567777788888887777555444 4556789999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCC-CCCCchHHHh
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQF-DTSDPKEEKA 188 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~ 188 (573)
++++.++++++. +.+.++++|+++|+|.+...+.....+.+.+ |+++
T Consensus 81 ~~~~~~~~~~a~--------------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------ 128 (495)
T PRK14995 81 FGLASLAAAFSP--------------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------ 128 (495)
T ss_pred HHHHHHHHHHcC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------
Confidence 999999999873 6779999999999999998887777777776 4455
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHH------HH
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWR------VL 262 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 262 (573)
|+++++++....++|..+||.+++++.+..||||.|++.....++..++..+..|+.++++.+..+...... .+
T Consensus 129 r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l 208 (495)
T PRK14995 129 RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLL 208 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988776666555444444443221111111111000 00
Q ss_pred HHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh-HHHHHHHH
Q 008231 263 LLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK-LLPIWATC 341 (573)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~ 341 (573)
....+.... .......... .-........ .....+.+...|..+ ....+.+.... .+..+...
T Consensus 209 ~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~l~-~f~~~e~~~~~p~~~---~~lf~~~~~~~~~~~~~~~~ 272 (495)
T PRK14995 209 VYSAKTALK-GFLSLWVTSL-----------TLLTGALLLG-LFIRTQLAASRPMID---MRLFTHRIILSGVVMAMTAM 272 (495)
T ss_pred HHHHHhccc-cCCchHHHHH-----------HHHHHHHHHH-HHHHHHhcCCCCCcC---HHHhCCcccHHHHHHHHHHH
Confidence 011111000 0000000000 0000000000 000000011112211 11111122111 11111111
Q ss_pred HHHHHHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHH
Q 008231 342 ILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIF 421 (573)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~ 421 (573)
..++......+ .+.....+.+ ....+.......++..+..++.+++.+|..+| +.+..|.++
T Consensus 273 ~~~~~~~~~~~-~~lq~v~g~s------~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~g~~~ 334 (495)
T PRK14995 273 ITLVGFELLMA-QELQFVHGLS------PLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----------LVATGGMAL 334 (495)
T ss_pred HHHHHHHHHHH-HHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHHHHHHHH
Confidence 11111111111 1111111111 11233444455566667777777776655433 225667777
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHH
Q 008231 422 SVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVS 501 (573)
Q Consensus 422 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig 501 (573)
..++++.+.... . ..+.+......++.|++.+...+.....+.+..|++.+|.+.+++++.+.+|+.+|
T Consensus 335 ~~~~~~~l~~~~----------~-~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G 403 (495)
T PRK14995 335 SALSFYGLAMTD----------F-STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLG 403 (495)
T ss_pred HHHHHHHHHHhc----------C-CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHH
Confidence 766666554431 1 12333445567888999999888888889999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 008231 502 SMLVSIVDK 510 (573)
Q Consensus 502 ~~~~~~i~~ 510 (573)
+.+.+.+.+
T Consensus 404 ~ai~g~i~~ 412 (495)
T PRK14995 404 IAIFGLLLS 412 (495)
T ss_pred HHHHHHHHH
Confidence 999998865
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.95 E-value=2.5e-25 Score=237.42 Aligned_cols=170 Identities=13% Similarity=0.049 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..+..++..++..+..+.....+|.+ .+++|+|..+.+++.+.+.+++.++.+++|+++||+ |||+++.++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHH
Confidence 344455555555555555555555554 557999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+.++++++ .+++.+++.|++.|++.|...+...+++.|++|+++ |+++
T Consensus 101 ~~~~~~~~--------------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~ 148 (434)
T PRK11663 101 INILFGFS--------------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGW 148 (434)
T ss_pred HHHHHHHH--------------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHH
Confidence 99888876 367788889999999999888989999999999888 9999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 236 (573)
+++++.+.++|..++|.+.+++.+.+|||+.|++.++..++..+
T Consensus 149 ~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 149 WAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987765544433
No 14
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.3e-24 Score=232.47 Aligned_cols=400 Identities=12% Similarity=0.051 Sum_probs=244.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.+.++.+..+.++..++.+.+.+.+|.+.+ ++|.|..+.+++.+.+.++..++.+++|+++||+ |||++++.+..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 446788888888888888888887777765 7999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++.+++.++. +.+.++++|+++|++.+...+...+++.|.+|+++ |++
T Consensus 87 ~~~~~~~~~~--------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 134 (471)
T PRK10504 87 LGSLFCALSG--------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMA 134 (471)
T ss_pred HHHHHHHHhC--------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHH
Confidence 8888877652 56788899999999999999999999999999877 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHH---HHHHHh-
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRV---LLLAWK- 267 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 267 (573)
+.++.+...++|..+||.+++++.+..|||+.|++......+..+......++.+..+.+.+........ ......
T Consensus 135 ~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 214 (471)
T PRK10504 135 AMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLAL 214 (471)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877665555554444444322221111111100000 000000
Q ss_pred ccCCCCCCCCCcchhcccccCCCCCccchh-hhh--hhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHH
Q 008231 268 KRSHPYPDHPSLLNEYQNAKVPHTEKFKCL-DKA--AIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCIL 343 (573)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 343 (573)
...... .+. ....... ... .......++..+ ..+. ......+.+..... ...++....
T Consensus 215 ~~~~~~----~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~l~~~~~~~~~l~~~~~~~~~ 276 (471)
T PRK10504 215 DGSKGL----GLS----------PLAIAGLVAVGVVALLLYLLHARNN-NRAL---FSLKLFRTRTFSLGLAGSFAGRIG 276 (471)
T ss_pred hcCCcC----Ccc----------hHHHHHHHHHHHHHHHHHHHHHhcC-CCCc---cCHHHhcccchHHHHHHHHHHHHH
Confidence 000000 000 0000000 000 000000000000 0011 00011111122111 111111111
Q ss_pred HHHHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHH
Q 008231 344 FWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSV 423 (573)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~ 423 (573)
+ .......+++.....+.+ ....+.+.....++.++..++.+++.+|+.+| +.+..+.++.+
T Consensus 277 ~-~~~~~~~~~~~~~~~g~~------~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----------~~~~~~~~~~~ 338 (471)
T PRK10504 277 S-GMLPFMTPVFLQIGLGFS------PFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----------RVLVATTLGLA 338 (471)
T ss_pred H-HHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHHHHHHHHHH
Confidence 1 111111222222111111 11222333333444444556666665554433 22555666566
Q ss_pred HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHH
Q 008231 424 IAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSM 503 (573)
Q Consensus 424 i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~ 503 (573)
++.+++... .. ....+++....++.|++.+...+....++.+..|++.+|.++|+.++.+.+|+.+|+.
T Consensus 339 ~~~~~~~~~----------~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 407 (471)
T PRK10504 339 LVSLLFMLV----------AL-LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVT 407 (471)
T ss_pred HHHHHHHhc----------cc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHH
Confidence 555544432 11 1123333445667778888888888889999999999999999999999999999999
Q ss_pred HHHHHhhhh
Q 008231 504 LVSIVDKIT 512 (573)
Q Consensus 504 ~~~~i~~~~ 512 (573)
+.+.+.+..
T Consensus 408 i~g~ll~~~ 416 (471)
T PRK10504 408 IAGLLLGLF 416 (471)
T ss_pred HHHHHHHHh
Confidence 999887643
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=1e-24 Score=230.56 Aligned_cols=359 Identities=14% Similarity=0.074 Sum_probs=238.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
.+|..+.+.....+++.+..+...... +.+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAA-PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 455667777777788888776665544 455678999999999999999999999999999999998 999999999998
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
..++.+++.++. +.+.+++.|++.|++.+...+...+++.|++|+++ |
T Consensus 90 ~~~~~~~~~~~~--------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r 137 (406)
T PRK11551 90 FGLFSLATAQAW--------------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------R 137 (406)
T ss_pred HHHHHHHHHHhc--------------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------H
Confidence 888888877753 56788999999999999999999999999999888 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhcc
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKR 269 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
++++++.+.+.++|..+++.+++.+.+..+|+++|++.++..++..+......|+.++.+++++.
T Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------------- 202 (406)
T PRK11551 138 GTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA--------------- 202 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc---------------
Confidence 99999999999999999999999998889999999887665544444333333332111000000
Q ss_pred CCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhh
Q 008231 270 SHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYS 349 (573)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 349 (573)
.+ +..+..+. .+ +.. ...+........+......+....
T Consensus 203 ----~~----------------~~~~~~~~----------------~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 241 (406)
T PRK11551 203 ----GK----------------QRAPVLRA----------------LF---GEG--RATATLLLWISYFFTLIVLYFLLN 241 (406)
T ss_pred ----ch----------------hhhhhHHH----------------Hh---hhh--hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000000 00 000 001111111111111222222222
Q ss_pred cccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHH
Q 008231 350 QMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVS 429 (573)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~ 429 (573)
+.+.+... .+.+ ....+.+.....++.++...+.+++.||..+|+. +..+.+...++++.+
T Consensus 242 ~~p~~~~~--~g~s------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 242 WLPSLLVG--QGLS------RSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV-----------VLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHh--CCCC------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-----------HHHHHHHHHHHHHHH
Confidence 22222111 1111 1123344455556666667777777666544421 333444444444333
Q ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008231 430 AVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVD 509 (573)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~ 509 (573)
... .+.+.+....++.+++.....+..+++..+.+|++.||++.|+.+....+|+.+++.+.|.+.
T Consensus 303 ~~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 303 AAA--------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred Hhc--------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 321 123344455566777777777888889999999999999999999999999999999999887
Q ss_pred hh
Q 008231 510 KI 511 (573)
Q Consensus 510 ~~ 511 (573)
+.
T Consensus 369 ~~ 370 (406)
T PRK11551 369 AL 370 (406)
T ss_pred cc
Confidence 53
No 16
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=3.8e-25 Score=232.93 Aligned_cols=355 Identities=10% Similarity=0.008 Sum_probs=233.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
..+|.++.++...++...+++.+.++++.|+++++|+|..+.+++.+.+.+.+.+++++.|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 3456688888999999999999999999999999999999999999999999999999999999998 999999999998
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
..++.+++.+++ +.+.++++|.+.+.+.+...+...++..|.+|+++ |
T Consensus 83 ~~~~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 130 (395)
T PRK10054 83 FASGFIAIPLVN--------------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------K 130 (395)
T ss_pred HHHHHHHHHHHh--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------H
Confidence 888888877753 56677778888888777777888889999999877 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhcc
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKR 269 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
++++++.+...++|..+||.+++++.+ .||+.+|++.++..++..+...+..++.++.+++ ++ +.
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-~~-~~------------ 195 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT-ET-GS------------ 195 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc-ch-hh------------
Confidence 999999999999999999999999875 7999999988776666554433322221110000 00 00
Q ss_pred CCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHH-hHHHHHHHHHHHHHHh
Q 008231 270 SHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVL-KLLPIWATCILFWTVY 348 (573)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~ 348 (573)
.+ +..+..+.|... .....++.........
T Consensus 196 ----------------------------------------------~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 226 (395)
T PRK10054 196 ----------------------------------------------VW---SPSVLLQDKALLWFTCSGFLASFVSGAFA 226 (395)
T ss_pred ----------------------------------------------hh---hhhhhccCceehHHHHHHHHHHHHHHHhh
Confidence 00 000000011111 1111111111111111
Q ss_pred hcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 008231 349 SQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIV 428 (573)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~ 428 (573)
.....+.... .+.... ....+.+........+...+..+++.+ |. +....+..++++..++++.
T Consensus 227 ~~~~~~~~~~-~~~~~~----~~~~g~~~~~~~~~~~~~~~~~g~~~~----~~-------~~~~~l~~~~~~~~~~~~~ 290 (395)
T PRK10054 227 SCISQYVMVV-ADSDFA----EKVVAVVLPVNAAMVVSLQYSVGRRLN----AA-------NIRPLMTAGTLCFVIGLVG 290 (395)
T ss_pred hhHHHHHHHh-cccchH----HHHHHHHHHhhhhheeeehhHHHHHHc----cC-------CchhHHHHHHHHHHHHHHH
Confidence 1111111111 010000 001112222222222233333334332 22 1123356666666666655
Q ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 429 SAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
+.... .+.+.+.+..++.++|+....|...+++.+..|++.+|++.+..+ ...+|..+||.+.|++
T Consensus 291 ~~~~~-------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l 356 (395)
T PRK10054 291 FIFSG-------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVI 356 (395)
T ss_pred HHHcc-------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHH
Confidence 54321 133334556778899998888998999999999999999998765 5678999999999999
Q ss_pred hhh
Q 008231 509 DKI 511 (573)
Q Consensus 509 ~~~ 511 (573)
.+.
T Consensus 357 ~~~ 359 (395)
T PRK10054 357 LTT 359 (395)
T ss_pred HHH
Confidence 874
No 17
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.94 E-value=8.3e-25 Score=242.91 Aligned_cols=177 Identities=13% Similarity=0.025 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+.++.++.+...+... +.+.+.+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++.+++
T Consensus 168 l~~i~~l~~~~~g~d~~-~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~ 245 (742)
T TIGR01299 168 LFFVLGLALMADGVEVF-VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFF 245 (742)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 33444444444444443 344555677889999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.++++++. +++.++++|++.|+|.++..+...++++|.+|++. |++.+
T Consensus 246 ~ll~afa~--------------------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~ 293 (742)
T TIGR01299 246 AFFSSFVQ--------------------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHL 293 (742)
T ss_pred HHHHHHHh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHH
Confidence 98888763 67789999999999999999999999999999888 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcc-------------cchhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDN-------------VGRGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~-------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
++++....+|.++++.++.++... .+||+.+++.++..++.++.. +..|+.
T Consensus 294 g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~-~~lPES 357 (742)
T TIGR01299 294 SWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGAL-TFMPES 357 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 999999999999999877665432 368988887776655554433 334544
No 18
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.94 E-value=1.8e-24 Score=229.00 Aligned_cols=181 Identities=13% Similarity=0.014 Sum_probs=153.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
.+|+.++.+.+..+++.++...+ ++..+.+++++|+|..+.+++.+.+.+++.+++++.|+++||+ |||+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINI-GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhH-HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 46666777777777777766554 4455589999999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
+.++..++++++ +.+.+++.|++.|++.+...|...+++.|++|+++ |
T Consensus 83 ~~~~~~~~~~~~--------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r 130 (412)
T TIGR02332 83 WGIASTATMFAT--------------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------R 130 (412)
T ss_pred HHHHHHHHHHhc--------------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------H
Confidence 999999998863 56789999999999999999988899999999888 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhc------ccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQD------NVGRGWGYGISAGTMVVAAAILLIGTPW 244 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~------~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 244 (573)
+++.++++.+.++|..+++.+++++.+ ..|||++|++.++..++..+++++..|+
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 131 ARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999999998863 4699999998777665544444444443
No 19
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.94 E-value=3.5e-24 Score=228.40 Aligned_cols=178 Identities=19% Similarity=0.124 Sum_probs=137.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---CCchhhhHHHHHHHHHHH---HHHhHHHHHhhhccchhHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLH---LSSAKSATIVTNFMGTLN---LLGLLGGFLADAKLGRYLTVA 104 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~~~~~~~~~~~---~~~~~~G~laDr~~Grr~~~~ 104 (573)
+++.+....++.+++.++... .+++.+++.++++ .+..+.+.+.+.+...+. ++++++|+++||+ |||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~ 97 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHH
Confidence 444555566678888888755 6677788888885 555555555555544444 9999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCch
Q 008231 105 IFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK 184 (573)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
++..++++++++++++.++.... ......+++.|+++|++.|+..+...++++|++|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~-- 157 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIG------------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR-- 157 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHH------------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc--
Confidence 99999999999998874321000 0134568899999999999999999999999999988
Q ss_pred HHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh--------cccchhHHHHHHHHHHHHH
Q 008231 185 EEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ--------DNVGRGWGYGISAGTMVVA 234 (573)
Q Consensus 185 ~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~~~ 234 (573)
|+++.++.+.+.+.|..+++++...+. +.+|||++|++.++..++.
T Consensus 158 ----rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 158 ----KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 999999998888899888887765543 2579999999876655443
No 20
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=1.2e-24 Score=230.90 Aligned_cols=390 Identities=13% Similarity=0.030 Sum_probs=243.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
..++...++..++.......+|.+. ++++.+..+.|++.+.+.++..+++++.|+++||+ |||+++.++..+.+++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~ 97 (417)
T PRK10489 20 RAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFI 97 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHH
Confidence 3444455566666555555555554 56788999999999999999999999999999998 999999988887777766
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
+++...... ..+++.+++.|++.|++.+...+...+++.|++|+++ |+++.++
T Consensus 98 ~~~~~~~~~---------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 150 (417)
T PRK10489 98 GLALNAFLP---------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAI 150 (417)
T ss_pred HHHHHHHcC---------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHH
Confidence 554311000 0256778889999999988888888899999999877 9999999
Q ss_pred HHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCC-CCchhHHHHHHHHHHhccCCCCC
Q 008231 196 FYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPR-GSPLTVIWRVLLLAWKKRSHPYP 274 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 274 (573)
.+...++|..+||.+++++.+..||++.|++.++..++..+..+. .|+.++++.+ .++..+
T Consensus 151 ~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~----------------- 212 (417)
T PRK10489 151 TMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPALPPPPQPREHPLRS----------------- 212 (417)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCCCCCCcccccchHH-----------------
Confidence 999999999999999999998889999998877666555444332 2221110000 000000
Q ss_pred CCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccch
Q 008231 275 DHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTF 354 (573)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 354 (573)
..+ .+ ....+.+.....+................+.
T Consensus 213 ---------------------~~~-----------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~- 248 (417)
T PRK10489 213 ---------------------LLA-----------------GF-----RFLLASPVVGGIALLGGLLTMASAVRVLYPA- 248 (417)
T ss_pred ---------------------HHH-----------------HH-----HHHHcChHHHHHHHHHHHHHHHHhHHHhhHH-
Confidence 000 00 0000111111111111111111111111111
Q ss_pred hhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 355 TVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQ 434 (573)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~ 434 (573)
+..+..+.+ ....+.+.....++.++...+.+++.+ |.. ..+.+..+.++..++++++...
T Consensus 249 ~~~~~~g~~------~~~~g~~~~~~~~g~~ig~~~~~~l~~----~~~-------~~~~l~~~~~~~~~~~~~~~~~-- 309 (417)
T PRK10489 249 LADEVWQMG------AAQIGLLYAAVPLGAALGALTSGWLAH----SAR-------PGLLMLLSTLGSFLAVGLFGLM-- 309 (417)
T ss_pred HHHhccCCC------hhHhHHHHHHHHHHHHHHHHHHHHhhh----ccC-------cchHHHHHHHHHHHHHHHHHcc--
Confidence 111111111 112334444555555555656555532 211 1122555666666665554432
Q ss_pred HHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 008231 435 QRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNK 514 (573)
Q Consensus 435 ~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~ 514 (573)
.+.+......++.|++.+...+...+++.+..|++.||++.|+++...++|+.+|+.+.|.+.+..+
T Consensus 310 ------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g- 376 (417)
T PRK10489 310 ------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT- 376 (417)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-
Confidence 1334455566777888877778888899999999999999999999999999999999999986421
Q ss_pred CccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcchhhhccc
Q 008231 515 HWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNVQHRV 559 (573)
Q Consensus 515 ~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 559 (573)
....++..+++.++..++.....++.|++++++.
T Consensus 377 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (417)
T PRK10489 377 -----------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPP 410 (417)
T ss_pred -----------hhhHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 2234555565655655666666666666554443
No 21
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.6e-25 Score=221.23 Aligned_cols=404 Identities=12% Similarity=0.020 Sum_probs=265.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMN---LVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~---l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
--+.++...++...+||.+... ..+++.++.++|.+|.|.+.+.+.+.+.++..+.|.++||. +.|+.+.+++++.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLils 104 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHH
Confidence 3477888888999999987654 57789999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
++..+++.+++ ++..+.+..++.|..+|+-.|.+...++.+++++| ||
T Consensus 105 ai~nil~Gfs~--------------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG 152 (448)
T COG2271 105 AIVNILFGFSP--------------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RG 152 (448)
T ss_pred HHHHHHHhhhh--------------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cC
Confidence 99999999974 56788888999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHh--hhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhc
Q 008231 191 FFFNRFYFAISIGSLFAVIVL--VYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKK 268 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~--~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
+..++++.+-|+|+.+.|++. +++....+||..|+++++++++..++.++..+..++ ..-++++.+
T Consensus 153 ~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq----s~GLP~ie~-------- 220 (448)
T COG2271 153 TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ----SEGLPPIEE-------- 220 (448)
T ss_pred ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc----ccCCCCHHH--------
Confidence 999999999999999999999 899888899999999998777665554444432222 111111000
Q ss_pred cCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHh
Q 008231 269 RSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVY 348 (573)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 348 (573)
.+.+.++ .++ .+++++ .-..|+......++++...+..+...+.-++-+...
T Consensus 221 ~~~d~~e----~~~-----~~~~~~-------------------~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~ 272 (448)
T COG2271 221 YRGDPLE----IYE-----EEKENE-------------------GLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGIN 272 (448)
T ss_pred hhcCchh----hhh-----hhccCC-------------------CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHh
Confidence 0000000 000 000000 001111111112222223333333334444444555
Q ss_pred hcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 008231 349 SQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIV 428 (573)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~ 428 (573)
.+.+.++.+ ..+++.. .+.+..+..-.+.+....+.+|+.|++.+.+.. +. -.+.++...++++.
T Consensus 273 dW~p~YL~e-~k~~s~~------~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~------p~--~~i~~~~i~~~~~~ 337 (448)
T COG2271 273 DWGPLYLSE-VKGFSLV------KANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG------PM--ALIFMLLITASLVL 337 (448)
T ss_pred hhHHHHHHH-hcCCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc------hH--HHHHHHHHHHHHHH
Confidence 555554444 3343322 344555666677778888888998887644321 10 11222222222222
Q ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 008231 429 SAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISM-GMFVSSMLVSI 507 (573)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~l-g~~ig~~~~~~ 507 (573)
+-.. ...+.+.....+++.|+......-..-..+.|.+|++..|++.|+...+.++ |...+....|+
T Consensus 338 ~w~~------------~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~ 405 (448)
T COG2271 338 YWLA------------PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGY 405 (448)
T ss_pred HHcC------------CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCccee
Confidence 2221 1123344444444444433222223334577999999999999999999988 88888888887
Q ss_pred HhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 008231 508 VDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAM 549 (573)
Q Consensus 508 i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 549 (573)
+.|.. || ...|.++.+.++++.++++...+
T Consensus 406 i~d~~--gW----------~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 406 IADTW--GW----------DGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred eEecC--CC----------cchHHHHHHHHHHHHHHHHHHHh
Confidence 76642 55 24566666666666665555443
No 22
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.94 E-value=8.9e-24 Score=222.43 Aligned_cols=176 Identities=16% Similarity=0.097 Sum_probs=153.4
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHH
Q 008231 26 RSKTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAI 105 (573)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 105 (573)
...+..|+.+..+.+..++.....|...+.+|. +.+++|++..+.++..+.+.+...++.++.|+++||+ |||+++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~ 90 (394)
T PRK10213 13 AITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVIL 90 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHH
Confidence 344557777777777777776676666666665 5679999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchH
Q 008231 106 FASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKE 185 (573)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
+..+.+++.+++.++ .+++.+++.|+++|++.+...+...+++.|++|+++
T Consensus 91 ~~~~~~~~~~~~~~~--------------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~--- 141 (394)
T PRK10213 91 FAVLLTLSCLLVSFA--------------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT--- 141 (394)
T ss_pred HHHHHHHHHHHHHHH--------------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH---
Confidence 999999998888875 367899999999999999999999999999999888
Q ss_pred HHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHH
Q 008231 186 EKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAA 235 (573)
Q Consensus 186 ~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 235 (573)
|+++.++...+.++|..++|.+++++.+.+|||+.|++.++..++..
T Consensus 142 ---~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 142 ---VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998776554443
No 23
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=3.2e-24 Score=231.71 Aligned_cols=437 Identities=13% Similarity=0.013 Sum_probs=248.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--------CCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDL--------HLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLT 102 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~ 102 (573)
+.+.++...++.+...++...+.+.+ +.+++++ +.+..+.+++.+.+.++..++++++|+++||+ |||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTV-ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhH-HHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence 44556666666666666654444333 3345554 89999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCC
Q 008231 103 VAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSD 182 (573)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~ 182 (573)
++++..++.++.++++++...-. .-..++......++++|+++|++.|...+...++++|++|+++
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~ 153 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFT--------------SIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI 153 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccc--------------cccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh
Confidence 99999999888887776310000 0000111345678899999999999999999999999999988
Q ss_pred chHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh--------cccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCc
Q 008231 183 PKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ--------DNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSP 254 (573)
Q Consensus 183 ~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (573)
|++++++.+.+..+|..+++.+++.+. +.+|||++|++.++..++..+..+ ..|+.++....+.+
T Consensus 154 ------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~-~l~~s~~~l~~~~~ 226 (479)
T PRK10077 154 ------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLY-FVPETPRYLMSRGK 226 (479)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHH-cCCCCcHHHHHcCC
Confidence 999999999999999999987765443 456999999987766655544333 33432211000111
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH
Q 008231 255 LTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL 334 (573)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (573)
.++..+..... . .+ .+.....+..+. .. .... ...+..+..
T Consensus 227 ~~~~~~~~~~~-~-----~~----------------~~~~~~~~~~~~--~~--------------~~~~-~~~~~~~~~ 267 (479)
T PRK10077 227 QEQAEGILRKI-M-----GN----------------TLATQALQEIKH--SL--------------DHGR-KTGGKLLMF 267 (479)
T ss_pred HHHHHHHHHHH-c-----CC----------------hhHHHHHHHHHH--HH--------------HHhh-hhhhhhcch
Confidence 11100000000 0 00 000000000000 00 0000 000011000
Q ss_pred HHHHHHHHHHHHHhhcccchh--hhhhhcccccccccee-cccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCch
Q 008231 335 LPIWATCILFWTVYSQMTTFT--VEQATFMNRKIGSFTV-PSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTS 411 (573)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~ 411 (573)
.............+.+...+. ........... +... ..........+..++..++.+++.||+.||.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~-g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~--------- 337 (479)
T PRK10077 268 GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTL-GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP--------- 337 (479)
T ss_pred hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChH---------
Confidence 000111000011111111100 00000000000 0011 1122233344455566667777776665442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHh-hhhhhhheeecccCchhHHHHHHHH
Q 008231 412 LQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAF-VYVGQLEFFIREGPERMKSMSTGLF 490 (573)
Q Consensus 412 ~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~rg~~~gi~ 490 (573)
.+..+.++++++++++..... . .....+.....++.+.+... ..|..+.++.|.+|++.|++++|+.
T Consensus 338 --~~i~~~~~~~v~~~~l~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 405 (479)
T PRK10077 338 --LQIIGALGMAIGMFSLGTAFY---------T-QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIA 405 (479)
T ss_pred --HHHHhHHHHHHHHHHHHHHHh---------c-CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHH
Confidence 266777777777766654321 1 11122333344444554443 3377789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcchhhhc
Q 008231 491 LSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNVQH 557 (573)
Q Consensus 491 ~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 557 (573)
+..+.+++++++.+.+.+.+. +|+.+..+ ....|++.++++++++++.+++.++.|+++.+
T Consensus 406 ~~~~~~g~~~~~~~~p~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 466 (479)
T PRK10077 406 VAAQWIANYFVSWTFPMMDKN---SWLVAHFH---NGFSYWIYGCMGVLAALFMWKFVPETKGKTLE 466 (479)
T ss_pred HHHHHHHHHHHHHHhHHHHhc---cchhhhcc---CccHHHHHHHHHHHHHHHHHhccccCCCCCHH
Confidence 999999999998888766531 23222111 12456666777777777666677776665443
No 24
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=7.7e-24 Score=229.38 Aligned_cols=176 Identities=16% Similarity=0.018 Sum_probs=136.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhh-hHH-----HHHHHHHHHHHHhHHHHHhhhccchhHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKS-ATI-----VTNFMGTLNLLGLLGGFLADAKLGRYLTVAI 105 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~-~~~-----~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 105 (573)
++.+....++.+++.+++.. ..+..+++.++++.+..+. +++ .++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 45667777888999888754 5566678888887554332 222 3666788889999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchH
Q 008231 106 FASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKE 185 (573)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
+++++++++++++++.++.... -.....++++|+++|+|.|+..+...++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g------------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~--- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG------------------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK--- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH------------------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC---
Confidence 9999999999999975322000 0011247899999999999999999999999999998
Q ss_pred HHhHHHHHHHHHHHHHhhhHHHHHHhhhhh--------cccchhHHHHHHHHHHHH
Q 008231 186 EKAMIFFFNRFYFAISIGSLFAVIVLVYVQ--------DNVGRGWGYGISAGTMVV 233 (573)
Q Consensus 186 ~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~~ 233 (573)
|++..++...+..+|..+|+.+...+. ..+|||++|++.++..++
T Consensus 152 ---Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 152 ---RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999999998888888888876654432 257999999987654443
No 25
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.94 E-value=2.8e-24 Score=230.82 Aligned_cols=405 Identities=13% Similarity=0.080 Sum_probs=229.0
Q ss_pred HHhhhcCCC--------chhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 008231 59 YLVGDLHLS--------SAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQ 130 (573)
Q Consensus 59 yl~~~~~~s--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (573)
.+..+++++ ..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..++.+..+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~------- 124 (481)
T TIGR00879 53 LPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA------- 124 (481)
T ss_pred cHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 444455555 89999999999999999999999999998 99999999999999998888664321
Q ss_pred CccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 008231 131 CDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIV 210 (573)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~ 210 (573)
.+.+.++++|++.|+|.+...+...++++|++|+++ |++++++++.+.++|..+++.+
T Consensus 125 ----------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~ 182 (481)
T TIGR00879 125 ----------------LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGF 182 (481)
T ss_pred ----------------cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHH
Confidence 245688999999999999999999999999999998 9999999999999999999999
Q ss_pred h---hhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhccccc
Q 008231 211 L---VYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAK 287 (573)
Q Consensus 211 ~---~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (573)
+ +.+.+..|||++|++.++..++..+..++ .++.+......++.....+.. ...+.... + . ...
T Consensus 183 ~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~-~-~~~------- 249 (481)
T TIGR00879 183 GSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFF-LPESPRWLVGKGRVEEARKSL-ARLRGTSG--E-D-KEL------- 249 (481)
T ss_pred HHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHHcCChHHHHHHH-HHHhCCCC--C-c-HHH-------
Confidence 9 77777789999999866555444433333 333211100001111101100 00000000 0 0 000
Q ss_pred CCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhh---cccchhhhhhhcccc
Q 008231 288 VPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYS---QMTTFTVEQATFMNR 364 (573)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 364 (573)
.+..+.... ....+.+.....|+.. ....+.. .....+.....++.... ....+..........
T Consensus 250 ------~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 316 (481)
T TIGR00879 250 ------LDELELIDI--KRSIEKRSVQPSWGSL----FSSTRRI-RRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV 316 (481)
T ss_pred ------HHHHHHHHH--HHHHHHhhccccHHHH----HhcCchh-HHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC
Confidence 000000000 0000000000001000 0000000 00000011111111111 011111111001110
Q ss_pred ccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 008231 365 KIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKH 444 (573)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~ 444 (573)
+ ............+..++...+.+++.||..+|. .+..+.++.+++++++...... ..
T Consensus 317 ~----~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-------~~ 374 (481)
T TIGR00879 317 S----TDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP-----------LLLIGAAGMAICLFVLGILGAS-------FV 374 (481)
T ss_pred C----chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-----------HHHHHHHHHHHHHHHHHHHhhc-------cc
Confidence 0 111233344445555666666777766655442 2455566666666655532110 01
Q ss_pred cc----cchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc
Q 008231 445 IQ----ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSN 520 (573)
Q Consensus 445 ~~----~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~ 520 (573)
.+ ....+++...++.+.......+....++.|..|++.|+++.|+.++..++|+++++.+.+.+.+.. +|
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~--~~---- 448 (481)
T TIGR00879 375 TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI--GV---- 448 (481)
T ss_pred CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--Cc----
Confidence 10 022222222222222223344667778899999999999999999999999999999999887542 12
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhcch
Q 008231 521 LNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQY 553 (573)
Q Consensus 521 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 553 (573)
...|+++++++++++++.+++.++.++
T Consensus 449 ------~~~f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 449 ------GGVFIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred ------cceehhHHHHHHHHHHHHheecccCCC
Confidence 245667777777777766666555443
No 26
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=4.9e-24 Score=225.25 Aligned_cols=379 Identities=14% Similarity=0.084 Sum_probs=243.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchh-----hhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAK-----SATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFA 107 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 107 (573)
+....+.+..++..+++....+.+|.|++ ++|++..+ .+++.+.+.+...++.++.|+++||+ |||+++..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 45667777888888888888888888875 68888765 37888999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 108 SVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.+.+++..++.++ .+.+.+++.|++.|++.+. .+...+++.|.+|+++
T Consensus 92 ~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~----- 139 (408)
T PRK09874 92 LGMGIVMVLMGLA--------------------------QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNK----- 139 (408)
T ss_pred HHHHHHHHHHHHH--------------------------hhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhh-----
Confidence 8888888777765 3677889999999998654 5677788889998887
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHh
Q 008231 188 AMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWK 267 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (573)
|+++.++.+.+.++|..++|.+++.+.+..||++.|++.++..++..+...+..++.++..++++. .. .+
T Consensus 140 -~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~------- 209 (408)
T PRK09874 140 -SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM-LH-MR------- 209 (408)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh-hH-HH-------
Confidence 999999999999999999999999999889999999988776665555443333321110000000 00 00
Q ss_pred ccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHH
Q 008231 268 KRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTV 347 (573)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 347 (573)
+. ++ ..++.+......... ......
T Consensus 210 ------------------------------~~-----------------~~-----~~~~~~~~~~~~~~~---~~~~~~ 234 (408)
T PRK09874 210 ------------------------------EV-----------------VT-----SLKNPKLVLSLFVTT---LIIQVA 234 (408)
T ss_pred ------------------------------HH-----------------HH-----hCcCCchHHHHHHHH---HHHHHH
Confidence 00 00 000001111111010 111111
Q ss_pred hhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHH
Q 008231 348 YSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMI 427 (573)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i 427 (573)
.....+.+..................+.+..+..++.++..+..+++.||+.+|+ .+..+.++..++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~~~~~~~~ 303 (408)
T PRK09874 235 TGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK-----------ILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch-----------hHHHHHHHHHHHHH
Confidence 1111111111100000000000001122233344555566666777766554442 14445555444444
Q ss_pred HHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 428 VSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSI 507 (573)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~ 507 (573)
..... .+.+.+.+..++.|++.+...|...+.+.+..|++.+|+..++++....+|..+++.+.|.
T Consensus 304 ~~~~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~ 369 (408)
T PRK09874 304 PMSFV--------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAA 369 (408)
T ss_pred HHHHh--------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHH
Confidence 43332 1334445566778888888888888888899999999999999999999999999999998
Q ss_pred HhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 008231 508 VDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFF 547 (573)
Q Consensus 508 i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 547 (573)
+.+.. ++...|++.+++.+++.+..+..
T Consensus 370 l~~~~------------g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 370 ISANY------------GFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHhhc------------chhHHHHHHHHHHHHHHHHHHHH
Confidence 87532 23456777777777766555443
No 27
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=7.8e-24 Score=222.88 Aligned_cols=357 Identities=13% Similarity=0.018 Sum_probs=231.1
Q ss_pred HHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 008231 50 MGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPP 129 (573)
Q Consensus 50 ~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (573)
+.+.+ +.+.+++++|+|..+.+++.+.+.+++.+++++.|+++||+ |||+++..+..+++++.+++++++
T Consensus 26 ~~~~~-~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~-------- 95 (393)
T PRK09705 26 TSVGP-LLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP-------- 95 (393)
T ss_pred hccch-hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc--------
Confidence 44444 44567789999999999999999999999999999999998 999999999999999999999874
Q ss_pred CCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHH
Q 008231 130 QCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVI 209 (573)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 209 (573)
+++.++++|+++|+|.+...+....++.+++| ++ |+++++.+..+.++|..+|+.
T Consensus 96 ------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~ 150 (393)
T PRK09705 96 ------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAA 150 (393)
T ss_pred ------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHH
Confidence 56688999999999999999998999999887 66 999999999999999999999
Q ss_pred Hhhhhhccc-chhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccC
Q 008231 210 VLVYVQDNV-GRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKV 288 (573)
Q Consensus 210 ~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (573)
+++++.+.. +||+.+.+.++..++..+.++...++. ++++++ .+.
T Consensus 151 ~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------~~~------------- 196 (393)
T PRK09705 151 ITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSARE---VASSHK------------------TTT------------- 196 (393)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCC---CccccC------------------CCc-------------
Confidence 999988775 799887655444333333222221111 100000 000
Q ss_pred CCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhcccccccc
Q 008231 289 PHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGS 368 (573)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (573)
.+.+. .++.+.....+...+....++....+.+.++.. .+.+
T Consensus 197 --------------------------~~~~~-----l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~g~s----- 238 (393)
T PRK09705 197 --------------------------TPVRV-----VFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE--IGAS----- 238 (393)
T ss_pred --------------------------CCccc-----ccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCC-----
Confidence 00000 001111111111222223333333334333321 1222
Q ss_pred ceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccc
Q 008231 369 FTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQIS 448 (573)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 448 (573)
....+.......++.++...+.+++.+|..+| +.+..+..+..++++++.... . .
T Consensus 239 -~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----------~~~~~~~~l~~~~~~~~~~~~----------~---~ 293 (393)
T PRK09705 239 -AQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----------KLLMLALVLQLVGFCGFIWLP----------L---Q 293 (393)
T ss_pred -hhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----------HHHHHHHHHHHHHHHHHHHcc----------c---h
Confidence 11233445556666666667777765443332 224555556555555443321 1 1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhheeeccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhh
Q 008231 449 AFWLVPQYFLVGAGEAFVYVGQLEFFIREG-PERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLN 527 (573)
Q Consensus 449 ~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~-p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~ 527 (573)
...+ ..++.+++.+...|.......+.. |++.+|+..|+.+....++..++|.+.|++.+..+ ++.
T Consensus 294 ~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g-----------~~~ 360 (393)
T PRK09705 294 LPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG-----------NYL 360 (393)
T ss_pred HHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------Cch
Confidence 1111 123456666666676666666666 46789999999999999999999999999987542 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 008231 528 NFYWLLAVLGLLNFMVFLFFAMKH 551 (573)
Q Consensus 528 ~~~~~~a~~~~l~~~~~~~~~~~~ 551 (573)
..+.+.+.++++..+..+.+.+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 361 MDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc
Confidence 456666666666666666665553
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=6e-24 Score=220.22 Aligned_cols=359 Identities=14% Similarity=0.062 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 008231 37 LILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGL 116 (573)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 116 (573)
.++...++..++.......+|.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+..+..++..+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 3456666666666666666777665 6899999999999999999999999999999998 9999999999888888777
Q ss_pred HHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHH
Q 008231 117 LTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRF 196 (573)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 196 (573)
+.++...+ ..+.+.++++|++.|++.+...+...+++.|++|+++ |++++++.
T Consensus 81 ~~~~~~~~---------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 133 (365)
T TIGR00900 81 LPFVALLG---------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLS 133 (365)
T ss_pred HHHHHHcC---------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHH
Confidence 76653111 0267789999999999999999999999999999887 99999999
Q ss_pred HHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCC
Q 008231 197 YFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDH 276 (573)
Q Consensus 197 ~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (573)
+.+.++|..++|.+++++.+..||++.|++.++..+++.+......++.+++ ++.++.++
T Consensus 134 ~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------- 193 (365)
T TIGR00900 134 QAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA-SEIQALSN------------------- 193 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccccccch-------------------
Confidence 9999999999999999999989999999887766555544433322211110 00000000
Q ss_pred CCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHH-HHHHHHHHHHHhhcccchh
Q 008231 277 PSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLP-IWATCILFWTVYSQMTTFT 355 (573)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 355 (573)
+ .... . ...+ +...+.+....... .+..............+.+
T Consensus 194 ---------------~---~~~~--~-----------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (365)
T TIGR00900 194 ---------------A---VLRD--T-----------REGI-----KFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYV 237 (365)
T ss_pred ---------------h---HHHH--H-----------HhHH-----HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0 0000 0 0000 00011111111111 1111111111111111222
Q ss_pred hhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 356 VEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQ 435 (573)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~ 435 (573)
..+..+.+ ....+.+.....++.++...+.+++.++..+| +.+..+..+.+++++......
T Consensus 238 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-- 298 (365)
T TIGR00900 238 QSKYLGRG------STHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----------ALMTGAIFVIGLAILVVGLTP-- 298 (365)
T ss_pred HHHHhCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----------HHHHHHHHHHHHHHHHHHhhc--
Confidence 22111111 11233344455555566666666654333222 224445555555555444321
Q ss_pred HHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 436 RRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 436 ~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~ 510 (573)
+ +.+...+..++.|++.+...+...++..+..|++.||++.|+.++...++..+++.+.|.+.+
T Consensus 299 ----------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 299 ----------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred ----------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 245556677888999998899999999999999999999999999999999999999998875
No 29
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=6.5e-24 Score=221.82 Aligned_cols=382 Identities=15% Similarity=0.118 Sum_probs=232.7
Q ss_pred HHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 008231 54 MNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDD 133 (573)
Q Consensus 54 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (573)
+...+++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++..+.+++..+++++.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 4455568889999999999999999999999999999999998 999999999999999998888763
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhh
Q 008231 134 YRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVY 213 (573)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~ 213 (573)
+.+.++++|++.|++.+...+...+++.|++|+++ |++++++.+...++|..++|.++++
T Consensus 81 --------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~ 140 (399)
T TIGR00893 81 --------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGW 140 (399)
T ss_pred --------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHH
Confidence 57789999999999999999999999999999887 9999999999999999999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCc
Q 008231 214 VQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEK 293 (573)
Q Consensus 214 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (573)
+.+..+|++.|++.++..++..+...+..++.+++++..++.. + . ...+... ++.. ..+
T Consensus 141 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~--~~~~~~~------~~~~-~~~-- 199 (399)
T TIGR00893 141 ILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEE---K-------Y--IVVGGLL------AEQQ-GKG-- 199 (399)
T ss_pred HHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHH---H-------h--hcchhhc------cccc-ccc--
Confidence 9998999999998777665555544443333222111100000 0 0 0000000 0000 000
Q ss_pred cchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHHHHHHhhcccchhhhhhhccccccccceec
Q 008231 294 FKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVP 372 (573)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (573)
+....+. ...+..+.++.... +..+.............+. +..+..+.+ ...
T Consensus 200 ------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~ 252 (399)
T TIGR00893 200 ------------------PSTPKKY--QIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPT-YLVQERGLS------ILE 252 (399)
T ss_pred ------------------ccCCCcc--chHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHH-HHHHHhccc------HHH
Confidence 0000000 00011111222221 1111222222222121221 111111111 112
Q ss_pred ccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Q 008231 373 SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWL 452 (573)
Q Consensus 373 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l 452 (573)
.+.+.....+..++..++.+++.+|..+|... +........++.+........ .......+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 315 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKS----------LVFARKTAIIAGLVLSLLMFA-------TNYVNIPYAA 315 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----------hhHHHHHHHHHHHHHHHHHHH-------hccchhHHHH
Confidence 34455556666677777888887777666311 111111111111111110000 0001122222
Q ss_pred HHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHH
Q 008231 453 VPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWL 532 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~ 532 (573)
+....+.+.+.+ ..+..+++..|..|++.||++.|+.+....+|+.+++.+.|.+.+.. +.+...+++
T Consensus 316 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~-----------g~~~~~~~~ 383 (399)
T TIGR00893 316 LALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT-----------GSFAGALMV 383 (399)
T ss_pred HHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC-----------CchhHHHHH
Confidence 323233333333 67888999999999999999999999999999999999999887532 113456666
Q ss_pred HHHHHHHHHHHHH
Q 008231 533 LAVLGLLNFMVFL 545 (573)
Q Consensus 533 ~a~~~~l~~~~~~ 545 (573)
.+++.+++.+..+
T Consensus 384 ~~~~~~~~~~~~~ 396 (399)
T TIGR00893 384 VAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666655543
No 30
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=9.5e-24 Score=219.61 Aligned_cols=353 Identities=12% Similarity=0.061 Sum_probs=218.5
Q ss_pred HHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCc
Q 008231 53 SMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCD 132 (573)
Q Consensus 53 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (573)
.+...+.+++++|+|..+.+++.+.+.+++.+++++.|+++||+ |||+++..++.....+.. +....
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~----------- 76 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP----------- 76 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh-----------
Confidence 34445566889999999999999999999999999999999998 999887655544444332 22221
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhh
Q 008231 133 DYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLV 212 (573)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~ 212 (573)
.++..++++|++.|+|.+.. ++....++|++|+++ |++++++.+.+.++|..+++++++
T Consensus 77 --------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~ 135 (368)
T TIGR00903 77 --------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGL 135 (368)
T ss_pred --------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 25778999999999999864 455566799999887 999999999999999999999999
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCC
Q 008231 213 YVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTE 292 (573)
Q Consensus 213 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (573)
++.+.+|||+.|++.++..++..+.+++..|+.++.+++....+
T Consensus 136 ~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~------------------------------------ 179 (368)
T TIGR00903 136 KIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFK------------------------------------ 179 (368)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchH------------------------------------
Confidence 99999999999988666655554444444443211110000000
Q ss_pred ccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccccccceec
Q 008231 293 KFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVP 372 (573)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (573)
+..+ ++ + +..+++.........++....++....+.++++... +.+. .
T Consensus 180 --~~~~-----------------~~---~-~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~--g~s~-------~ 227 (368)
T TIGR00903 180 --DAVK-----------------EF---G-ALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPA--GLED-------I 227 (368)
T ss_pred --HHHH-----------------HH---H-HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCh-------H
Confidence 0000 00 0 001112222333334445555556666666655321 1111 1
Q ss_pred ccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Q 008231 373 SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWL 452 (573)
Q Consensus 373 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l 452 (573)
.+....+..+. ......++.|+..||..+ . .......++.++.+..+... . +....
T Consensus 228 ~~~~~~l~~~~---g~~g~~~~~d~~~r~~~r------~-~~~~~~~~~~a~~~~~~~~~-----------~---~~~~~ 283 (368)
T TIGR00903 228 AGDAVALAILA---GLIGVAVIPDRVARAGLR------S-IYIRAAALLIAAFFLALAFE-----------L---NRLAL 283 (368)
T ss_pred HHHHHHHHHHH---HHHHHHHhhHHhhhhhhH------H-HHHHHHHHHHHHHHHHHHHc-----------c---ccHHH
Confidence 12222222222 222234454444433111 1 11222223333333332221 1 12223
Q ss_pred HHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHH
Q 008231 453 VPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWL 532 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~ 532 (573)
+....+.+++.....+..+++..|.+|++.||++.|+.+....+++.+++.+.+.+.. +....|.+
T Consensus 284 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--------------~~~~~f~~ 349 (368)
T TIGR00903 284 FAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--------------SAEAYFTF 349 (368)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--------------CHHHHHHH
Confidence 3344445555555667788899999999999999999999999999999999887752 13456777
Q ss_pred HHHHHHHHHHHHH
Q 008231 533 LAVLGLLNFMVFL 545 (573)
Q Consensus 533 ~a~~~~l~~~~~~ 545 (573)
+++..+++++..+
T Consensus 350 ~~~~~~i~~~~~~ 362 (368)
T TIGR00903 350 LAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777766653
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=6.4e-24 Score=225.86 Aligned_cols=166 Identities=17% Similarity=0.089 Sum_probs=145.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+++.+....+..+.+.++.+.. .++.+++.+++|+|+.+.+++.+.+.++..+++++.|+++||+ |||+++.++..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 4455666666667777776555 4455677889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++.++++++ .+.+.++++|++.|++.+...+....++.|++|+++ |+
T Consensus 94 ~~~~~~~~~~--------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~ 141 (426)
T PRK12307 94 SVGTGLSGLA--------------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KS 141 (426)
T ss_pred HHHHHHHHHH--------------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hh
Confidence 9999888886 367789999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGT 230 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~ 230 (573)
++.++.+.+.++|.++++.+.+.+.+..|||++|++..+.
T Consensus 142 ~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 142 KASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 9999999999999999999999998889999999875443
No 32
>PRK09952 shikimate transporter; Provisional
Probab=99.93 E-value=2.7e-23 Score=221.85 Aligned_cols=180 Identities=12% Similarity=0.069 Sum_probs=137.7
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCchhhhHHHH-----HHHHHHHHHHhHHHHHhhhccch
Q 008231 27 SKTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDL--HLSSAKSATIVT-----NFMGTLNLLGLLGGFLADAKLGR 99 (573)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~s~~~~~~~~~-----~~~~~~~~~~~~~G~laDr~~Gr 99 (573)
+...+++.+....++.+++.++...+....+.++.+++ +.++. .+++.+ +..+...++.++.|+++||+ ||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Gr 93 (438)
T PRK09952 16 SLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GR 93 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-cc
Confidence 33455667777888888998888765555566666665 67766 455432 33445667888899999998 99
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCC
Q 008231 100 YLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFD 179 (573)
Q Consensus 100 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~ 179 (573)
|+++.++..+++++++++++++++.... ......+++.|+++|++.|+..+....++.|++|
T Consensus 94 r~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 155 (438)
T PRK09952 94 KRMLMLTVWMMGIATALIGLLPSFSTIG------------------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAP 155 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHH------------------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCC
Confidence 9999999999999999999875322000 0112358889999999999999999999999999
Q ss_pred CCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh--------cccchhHHHHHHHHHHH
Q 008231 180 TSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ--------DNVGRGWGYGISAGTMV 232 (573)
Q Consensus 180 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~ 232 (573)
+++ |++..+..+.+..+|..++..+..++. +.+|||++|++.++..+
T Consensus 156 ~~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 156 KNK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred CCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 998 999999999999999998887776654 35799999998766543
No 33
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=5.4e-24 Score=228.30 Aligned_cols=372 Identities=12% Similarity=0.015 Sum_probs=222.9
Q ss_pred HHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccc
Q 008231 57 VTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRR 136 (573)
Q Consensus 57 ~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (573)
.+.+.+++|++..+.+++.+.+.+...++.+++|+++||+ |||++++.+.++..++.+++++++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------- 105 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS--------------- 105 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh---------------
Confidence 3456689999999999999999999999999999999998 999999999999999988888763
Q ss_pred cccccccchhhHHHHHHH-HHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh
Q 008231 137 KHHQCIEANGKQLAMLYA-ALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ 215 (573)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~-~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~ 215 (573)
+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++++.
T Consensus 106 -----------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 106 -----------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred -----------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4555554 4688999998776666778888885 56 999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccc
Q 008231 216 DNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFK 295 (573)
Q Consensus 216 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (573)
+.+|||++|++.++..++..+..++..+.....+.+.... .+...++.. ....+...
T Consensus 168 ~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~----------~~~~~~~~ 224 (455)
T TIGR00892 168 ESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKS-------------KEGLPPDGS----------TKKLSKKS 224 (455)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccc-------------cccCCCCCc----------cccccccc
Confidence 9999999999888766655544444333211100000000 000000000 00000000
Q ss_pred hhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHHHHHHhhcccchhhhhhhccccccccceeccc
Q 008231 296 CLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSG 374 (573)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (573)
.. ++..++. ..... ..+..... ...++....++......+.+. .. .+.+ ....+
T Consensus 225 ~~--------------~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~-~g~s------~~~~g 279 (455)
T TIGR00892 225 TA--------------EKINRFL--DFSLF-THRGFLVYLSGNVIMFLGFFAPIIFLVPYA-KD-KGVD------EYEAA 279 (455)
T ss_pred hh--------------hhhhhhc--chHHh-cCchHHHHHHHHHHHHHHccchHHHHHHHH-HH-cCCC------HHHHH
Confidence 00 0000000 00001 11111111 111111111111111111111 11 1111 11233
Q ss_pred ccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Q 008231 375 SLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVP 454 (573)
Q Consensus 375 ~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~ 454 (573)
.+.++..++.++..++.+++.++...+ .+....+..+.++.+++++..... .+.+.++.
T Consensus 280 ~~~~~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~~~~~l~~ll~~~~--------------~~~~~~~i 338 (455)
T TIGR00892 280 FLLSIIGFVDIFARPSCGLIAGLKWIR-------PHVQYLFSFALLFNGLTHLLCALA--------------GDYTGLVI 338 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccC-------HHHHHHHHHHHHHHHHHHHHHHHh--------------chHHHHHH
Confidence 444555566666667777765431100 011111223333333333332221 13445566
Q ss_pred HHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHH
Q 008231 455 QYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLA 534 (573)
Q Consensus 455 ~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a 534 (573)
..++.|++.+...+..++.+.+.+|++.+|++.|++++...+|+++++.+.|.+.+..+ ++...|++.+
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g-----------~~~~~f~~~~ 407 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK-----------NYKYIFYASG 407 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC-----------CcchHHHHhh
Confidence 77788888888888889999999999999999999999999999999999998765321 1234555555
Q ss_pred HHHHHHHH
Q 008231 535 VLGLLNFM 542 (573)
Q Consensus 535 ~~~~l~~~ 542 (573)
++.+++.+
T Consensus 408 ~~~li~~~ 415 (455)
T TIGR00892 408 SIVVSAGL 415 (455)
T ss_pred HHHHHHHH
Confidence 55555443
No 34
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=1.9e-23 Score=219.92 Aligned_cols=173 Identities=16% Similarity=0.122 Sum_probs=150.9
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 008231 28 KTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFA 107 (573)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 107 (573)
.+.+|+.+....+..+.+.+..+...... +.+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVL-AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 35677788888888888888877665555 466789999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 108 SVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.+.+++.++++++. +++.+++.|++.|++.+...+...+++.|++|+++
T Consensus 85 ~~~~~~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~----- 133 (405)
T TIGR00891 85 VLFSAGTLACGFAP--------------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL----- 133 (405)
T ss_pred HHHHHHHHHHHHhc--------------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh-----
Confidence 99999988888763 56788999999999999999999999999999988
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc--hhHHHHHHHHHHHHH
Q 008231 188 AMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG--RGWGYGISAGTMVVA 234 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g--~~~~f~~~~~~~~~~ 234 (573)
|+++.++.+.+.++|..+++.+++.+.+..+ |++.|++.++..++.
T Consensus 134 -~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 134 -RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887666 999998765544433
No 35
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.93 E-value=2.4e-23 Score=220.08 Aligned_cols=343 Identities=13% Similarity=0.025 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008231 47 ICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSM 126 (573)
Q Consensus 47 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (573)
++...+.+.++. +.+++|.|..+.++..+.+.+++.++.++.|+++||+ |||+++.++..+.+++..++.++.
T Consensus 27 ~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----- 99 (406)
T PRK15402 27 IANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ----- 99 (406)
T ss_pred hhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc-----
Confidence 344444444443 5679999999999999999999999999999999998 999999999999999888887753
Q ss_pred CCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHH
Q 008231 127 RPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLF 206 (573)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 206 (573)
+.+.+++.|++.|++.+...+...+.+.|.+|+++ |.++.++.+....+|..+
T Consensus 100 ---------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 152 (406)
T PRK15402 100 ---------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLL 152 (406)
T ss_pred ---------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHH
Confidence 56788899999999999888888899999999887 899999988888899999
Q ss_pred HHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccc
Q 008231 207 AVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNA 286 (573)
Q Consensus 207 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (573)
+|.+++++.+..||+++|++.++..++..+......|+.++.++++.+..+
T Consensus 153 g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 203 (406)
T PRK15402 153 GPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKE----------------------------- 203 (406)
T ss_pred HHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHH-----------------------------
Confidence 999999999888999999887776665555444333322111000000000
Q ss_pred cCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHHHHHHhhcccchhhhhhhccccc
Q 008231 287 KVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCILFWTVYSQMTTFTVEQATFMNRK 365 (573)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (573)
..+ ......+.+..... .................+. +..+..+.+.
T Consensus 204 ---------~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~g~~~- 250 (406)
T PRK15402 204 ---------LGR----------------------DYKLVLKNRRFVAGALALGLVSLPLLAWIALSPV-ILISGEQLSS- 250 (406)
T ss_pred ---------HHH----------------------HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHhCCCH-
Confidence 000 00000011111111 1111111111111111111 1111111111
Q ss_pred cccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc
Q 008231 366 IGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHI 445 (573)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~ 445 (573)
...+.......++.++..++.+++.+|..+| +.+..+.++..++.+.+..... ..
T Consensus 251 -----~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----------~~~~~~~~~~~~g~~~~~~~~~---------~~ 305 (406)
T PRK15402 251 -----YEYGLLQVPVFGALIAGNLTLARLTSRRPLR-----------SLIRMGLWPMVAGLLLAALATV---------IS 305 (406)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHHHHH---------cc
Confidence 1112222223334445555666665444332 2256666666666666554321 11
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008231 446 QISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 446 ~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~ 511 (573)
....++++...++.+++.+...+..+...... +++.+|+..+++++.+.+++.+|+.+.+.+.+.
T Consensus 306 ~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 306 SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 22455667777888898888777666655443 458899999999999999999999999887653
No 36
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.93 E-value=3.1e-23 Score=225.37 Aligned_cols=446 Identities=12% Similarity=-0.013 Sum_probs=245.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGD-----LHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAI 105 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 105 (573)
+++.+.++.++.+.+.++...+....+. +.++ .+.+..+.+++.+.+.++..++.+++|+++||+ |||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 4456666777777777776555544443 3332 345566778999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchH
Q 008231 106 FASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKE 185 (573)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
+.++..++.++++++.+.. ...+...++++|++.|++.|+..+....+++|++|+++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~--------------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~--- 148 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSS--------------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW--- 148 (502)
T ss_pred HHHHHHHHHHHHHHccCcc--------------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh---
Confidence 9999999998888753200 00236789999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhhHHHHHHhhhhhc-----------------------ccchhHHHHHHHHHHHHHHHHHHhcC
Q 008231 186 EKAMIFFFNRFYFAISIGSLFAVIVLVYVQD-----------------------NVGRGWGYGISAGTMVVAAAILLIGT 242 (573)
Q Consensus 186 ~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~-----------------------~~g~~~~f~~~~~~~~~~~~~~~~~~ 242 (573)
|+++.++.+....+|..+++.++.++.. .++||++|.+.++..++..+.. +..
T Consensus 149 ---Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~-~~l 224 (502)
T TIGR00887 149 ---RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR-LTI 224 (502)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH-HhC
Confidence 9999999999999999999888765431 2479999987776655544433 334
Q ss_pred ccccccC-CCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccc
Q 008231 243 PWYRFKK-PRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVST 321 (573)
Q Consensus 243 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (573)
||.++-. .+++..++..+.+....+. +.++..++....++ + .+ +...+|+++.
T Consensus 225 pESpr~l~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~---~-~~-------------------~~~~~~~~l~ 278 (502)
T TIGR00887 225 PETPRYTADVAKDVEQAASDMSAVLQV---KIEAEPDEVEKAST---A-VE-------------------VPKASWSDFF 278 (502)
T ss_pred CCCHHHHHHhCcchHHHHHHHHHHhcc---ccccCcccccchhc---c-cc-------------------chhhhHHHHH
Confidence 5433210 0111111111111111110 00000000000000 0 00 0001121111
Q ss_pred hhh--HHHHHHHHhHHHHHH-HHHHHHHHhhcccchhhhhhhccccccccce-ec----cc-ccchhhHHHHHHHHHhhh
Q 008231 322 VTE--VEEVKMVLKLLPIWA-TCILFWTVYSQMTTFTVEQATFMNRKIGSFT-VP----SG-SLSAFLFITILLFTSLNE 392 (573)
Q Consensus 322 ~~~--~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~-~~~~~~~~~~l~~~~~~~ 392 (573)
... ....+..+.....++ ..+.++....+.++++.. .+++....+.. .. .. ....+..++.++...+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 356 (502)
T TIGR00887 279 THFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA--IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTV 356 (502)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH--HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 001111111111111 112222222222222211 11111100000 00 00 011122233333445556
Q ss_pred hhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhh
Q 008231 393 KVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLE 472 (573)
Q Consensus 393 ~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~ 472 (573)
++.||+.||.. +..+.++.+++++++...... . .... .++...+...++.....+..+.
T Consensus 357 ~l~dr~gRR~~-----------l~~~~~~~~~~~~~l~~~~~~--------~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 415 (502)
T TIGR00887 357 FLVDIIGRKPI-----------QLMGFFILTVLFFVLGFAYNH--------L-STHG-FLAIYVLAQFFANFGPNATTFI 415 (502)
T ss_pred HHhhhhcchhH-----------HHHHHHHHHHHHHHHHHHHHh--------c-chhH-HHHHHHHHHHHHhcCCCchhhh
Confidence 77777666532 445555555555544433110 0 0011 1111111112222234567778
Q ss_pred eeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008231 473 FFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQ 552 (573)
Q Consensus 473 ~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 552 (573)
+..|.+|++.|+++.|+.+..+.+++++++.+.+++.+..+..| +.....+....|++++++++++.+++ ++.||++
T Consensus 416 ~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~ 492 (502)
T TIGR00887 416 VPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK--GYPTGIWMGHVLEIFALFMFLGILFT-LLIPETK 492 (502)
T ss_pred hhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccc--cccccccchHHHHHHHHHHHHHHHHh-eEeccCC
Confidence 88999999999999999999999999999999998876321000 00000122346777777777766544 4557877
Q ss_pred hhhhc
Q 008231 553 YNVQH 557 (573)
Q Consensus 553 ~~~~~ 557 (573)
+++.+
T Consensus 493 ~~~le 497 (502)
T TIGR00887 493 GKSLE 497 (502)
T ss_pred CCCHH
Confidence 76543
No 37
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.93 E-value=8.5e-24 Score=228.69 Aligned_cols=398 Identities=12% Similarity=0.086 Sum_probs=247.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+..++++.+...++..... ...+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++..+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVN-VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 44556666677767665444 445566789999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.++++++. +...++++|+++|++.+...+...+++.|++|+++ |++++
T Consensus 81 ~~~~~~~~--------------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~ 128 (485)
T TIGR00711 81 SLLCGVAP--------------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAM 128 (485)
T ss_pred HHHHhCcC--------------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHH
Confidence 99988763 56789999999999999999999999999999887 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCC-CchhHHHH-----HHHHHHh
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRG-SPLTVIWR-----VLLLAWK 267 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~ 267 (573)
++++....+|..+||.+++++.+.+||++.|++.+...++..+...+..++.++++.++ +....... .......
T Consensus 129 ~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~ 208 (485)
T TIGR00711 129 AIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLS 208 (485)
T ss_pred HHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999877666555554444444322211111 11110000 0000000
Q ss_pred ccCCCCCCCCCcchhcccccCCCCCccchh---hhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHH
Q 008231 268 KRSHPYPDHPSLLNEYQNAKVPHTEKFKCL---DKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILF 344 (573)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 344 (573)
+. .+.. +. +. ...... ...........+ .+...|.. .....++++.....+..++....+
T Consensus 209 ~~-~~~~----~~--------~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T TIGR00711 209 EG-PERG----WF--------DS-NEILILSITGLVAIIAFVVWE-LTDDNPLV--DLRLFKYRNFTIGCVYMSLLGLGL 271 (485)
T ss_pred hC-CCCC----CC--------Cc-hHHHHHHHHHHHHHHHHHHHH-HcCCCCcc--CHHHHcCCChHHHHHHHHHHHHHH
Confidence 00 0000 00 00 000000 000000000000 00111111 001111111111122222222222
Q ss_pred HHHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHH
Q 008231 345 WTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVI 424 (573)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i 424 (573)
+......+.++. ...+.+ ....+.......++.++..++.+++.+|..+| +.+..+.++.++
T Consensus 272 ~~~~~~~p~~~~-~~~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~g~~~~~~ 333 (485)
T TIGR00711 272 YGSFYLLPLYLQ-QVLGYT------ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----------KLVTIGLILYAV 333 (485)
T ss_pred HHHHHHHHHHHH-HhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----------HHHHHHHHHHHH
Confidence 222222221211 111111 11234445556666777777888776555443 225666666666
Q ss_pred HHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008231 425 AMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSML 504 (573)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~ 504 (573)
+..++... .....+.+..+...++.|++.+...+.......+..|++.+|++.|+.++.+.+|+.+|+.+
T Consensus 334 ~~~~~~~~----------~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 403 (485)
T TIGR00711 334 GFYWRAFT----------FTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTAL 403 (485)
T ss_pred HHHHHhcc----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 66655421 11122444555567888999888887777778888999999999999999999999999999
Q ss_pred HHHHhh
Q 008231 505 VSIVDK 510 (573)
Q Consensus 505 ~~~i~~ 510 (573)
.+.+.+
T Consensus 404 ~g~~~~ 409 (485)
T TIGR00711 404 ITTILT 409 (485)
T ss_pred HHHHHH
Confidence 998875
No 38
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=2.6e-24 Score=231.69 Aligned_cols=159 Identities=12% Similarity=-0.011 Sum_probs=130.6
Q ss_pred HHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 008231 54 MNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDD 133 (573)
Q Consensus 54 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (573)
+...+.+.+++|+|..+.|++.+.+.+++.++++++|+++||+ |||+++.+++++.+++.++.++....
T Consensus 49 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~---------- 117 (467)
T PRK09556 49 KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS---------- 117 (467)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc----------
Confidence 3445567889999999999999999999999999999999999 99999999888888777666652100
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhh
Q 008231 134 YRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVY 213 (573)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~ 213 (573)
...+.+.+++.|++.|++.+...|...++++|++|+++ |+++++++..+.++|..+++.+..+
T Consensus 118 -----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 118 -----------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred -----------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHH
Confidence 00368899999999999999999999999999999998 9999999999999999999998877
Q ss_pred hhccc---chhHHHHHHHHHHHHHHHHHHh
Q 008231 214 VQDNV---GRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 214 l~~~~---g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
+.+.. +|+..|.+.++..++..+..++
T Consensus 181 ~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 181 GANYFFDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred HHHhhccCcchhHHHHHHHHHHHHHHHHHH
Confidence 76543 5888888766655444333333
No 39
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.93 E-value=2.2e-23 Score=223.60 Aligned_cols=160 Identities=10% Similarity=0.008 Sum_probs=127.5
Q ss_pred HHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 008231 54 MNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDD 133 (573)
Q Consensus 54 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (573)
++..+|+.++ |+|..+.+++.+.+.++..++++++|+++||+ |||+++.++..+.+++.++++++....
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~~--------- 117 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWAT--------- 117 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhccc---------
Confidence 3455678877 99999999999999999999999999999999 999999999999999888887752111
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhH-HHHHHhh
Q 008231 134 YRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSL-FAVIVLV 212 (573)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-~~~~~~~ 212 (573)
.+.+.+++.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|+. .+|+++.
T Consensus 118 -------------~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~ 178 (452)
T PRK11273 118 -------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLL 178 (452)
T ss_pred -------------ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 256678889999999999988888888999999888 99999999999999874 4555443
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 213 YVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 213 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
.+....|||+.|++.++..++..++..+..+
T Consensus 179 ~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~ 209 (452)
T PRK11273 179 GMAWFNDWHAALYMPAFAAILVALFAFAMMR 209 (452)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3433458999999877665554443333333
No 40
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.93 E-value=2e-23 Score=225.17 Aligned_cols=175 Identities=12% Similarity=-0.002 Sum_probs=134.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+++.+.......++..+..+.+.+.+ +++.+++|+|..+.+++.+.+.+++.++.+++|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 33444455555555555555554443 467889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++.++++++. +...+++.|++.|++.+...+ ...+++|++|+++ |+
T Consensus 112 ~~~~~~~~~~~--------------------------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg 158 (476)
T PLN00028 112 APAVFCMSLVS--------------------------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VG 158 (476)
T ss_pred HHHHHHHHHhc--------------------------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------ee
Confidence 99888888763 456788899999998887543 4567899999988 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhc---------ccchhHHHHHHHHHHHHHHHHHHh
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQD---------NVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~---------~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
+++++.+...++|..+++.+.+.+.. ..|||++|++.++..++..+..++
T Consensus 159 ~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 159 TANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999988788888877766654422 258999999887766555444433
No 41
>PRK03699 putative transporter; Provisional
Probab=99.93 E-value=6.2e-23 Score=216.13 Aligned_cols=376 Identities=10% Similarity=0.054 Sum_probs=238.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
.++|..+...+..++.....+.....+| .+.+++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMG-PIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 4556777777777777776655555454 46779999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
.+++.++++++. +.+.+++.|+++|++.+...+...+++.|.+|+++ |
T Consensus 82 ~~i~~~l~~~~~--------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r 129 (394)
T PRK03699 82 MILAVAGLMFSH--------------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------R 129 (394)
T ss_pred HHHHHHHHHHcc--------------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------H
Confidence 999988888752 67788999999999999988888999999998887 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhc-ccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhc
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQD-NVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKK 268 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
+++.+..+...++|+.++|.+.+++.. ..|||++|.+.++..++..+..+.... ++ ++++++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~--p~-~~~~~~-------------- 192 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEF--PA-LGKHAP-------------- 192 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCC--cc-ccccCc--------------
Confidence 999999888899999999999888754 579999998777655544433332111 10 000000
Q ss_pred cCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHh
Q 008231 269 RSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVY 348 (573)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 348 (573)
.++ .. ....+| +.+.....+..++.....+...
T Consensus 193 ----~~~--------------~~--------------------~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 225 (394)
T PRK03699 193 ----KAD--------------KP--------------------VAKEKW---------GIGVLFLAIAALLYILAQLTFI 225 (394)
T ss_pred ----ccc--------------Cc--------------------cccccC---------ChHHHHHHHHHHHHHHHHHHHH
Confidence 000 00 000011 0111111111222222222333
Q ss_pred hcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 008231 349 SQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIV 428 (573)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~ 428 (573)
.+.+.+.... .+++.. ..+.+.+...++..+...+.+++.||+.+|+ .+..+..+..+.+++
T Consensus 226 ~~~p~~l~~~-~g~s~~------~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----------~l~~~~~~~~~~~~~ 287 (394)
T PRK03699 226 SWVPEYAQKK-FGMSLE------DAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR-----------ILTVLAGLALVLMYL 287 (394)
T ss_pred HHHHHHHHHH-cCCChH------HhhHHHHHHHHHHHHHHHHHHHHHHHhchhh-----------HHHHHHHHHHHHHHH
Confidence 3333333221 122211 2333444445555666666777765554432 133333333333333
Q ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 429 SAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
+... .+.+++....++.|++.+...+...++..+..|++ ++...+.......+|..++|.+.|++
T Consensus 288 ~~~~--------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l 352 (394)
T PRK03699 288 FVNT--------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPI 352 (394)
T ss_pred HHHc--------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3221 12233444556667766666677777777777644 56778888888899999999999999
Q ss_pred hhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008231 509 DKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFA 548 (573)
Q Consensus 509 ~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 548 (573)
.+..+ ....+++.+++.+++.+...+..
T Consensus 353 ~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 353 VAHFG------------LQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHhC------------chhhhhhhHHHHHHHHHHHHHHH
Confidence 86432 23456666666666655444433
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=3.5e-23 Score=215.94 Aligned_cols=365 Identities=12% Similarity=0.047 Sum_probs=226.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHH-HHHHHHHHHHHH
Q 008231 39 LGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAI-FASVTALVVGLL 117 (573)
Q Consensus 39 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~~~~~~~ 117 (573)
++..++..++.....+.++.|+++++|.|..+.+++.+.+.+...+..++.|+++||+ ||||.++. +..+..++..++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3456777778888889999999999999999999999999999999999999999998 99887654 555555666677
Q ss_pred HhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH--HHH
Q 008231 118 TSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF--FNR 195 (573)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~ 195 (573)
+++. +++.+++.|++.|.+.+...|...++..|..|++. |.++ .+.
T Consensus 82 ~~~~--------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~ 129 (375)
T TIGR00899 82 AWNR--------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSV 129 (375)
T ss_pred Hhcc--------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHH
Confidence 6652 56678888888888877777887788888777655 5543 677
Q ss_pred HHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCC
Q 008231 196 FYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPD 275 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (573)
.+.+.++|..+||.+++++.+..|||++|++.++..++..+..++..|+.++.+++++.
T Consensus 130 ~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 188 (375)
T TIGR00899 130 MRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT--------------------- 188 (375)
T ss_pred HHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC---------------------
Confidence 88888999999999999999989999999988776665555444434432211100000
Q ss_pred CCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchh
Q 008231 276 HPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFT 355 (573)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 355 (573)
+.+.. ..+ ++ ++.+.... ..+.............+.++
T Consensus 189 -----------------~~~~~-----------------~~~---~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 226 (375)
T TIGR00899 189 -----------------RLEVR-----------------GLL---AS---RDTRLLFV--ACTLMWGCNILYIINMPLLI 226 (375)
T ss_pred -----------------cchhh-----------------hhh---cC---cchHHHHH--HHHHHHHHHHHHHhhhHHHH
Confidence 00000 000 00 00111111 11111111111111122221
Q ss_pred hhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 356 VEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQ 435 (573)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~ 435 (573)
....+.+.. ..+.+........+....+.+++.||..+|+ .+..+.++..+.++.....
T Consensus 227 -~~~~g~~~~------~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----------~~~~~~~~~~~~~~~~~~~--- 285 (375)
T TIGR00899 227 -IHELGLPDK------LAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR-----------LMLLAALAGVAFYTGLAAD--- 285 (375)
T ss_pred -HHHcCCCHH------HHHHHHHHHHHHHHHHHHhHHHHHHHhcchh-----------HHHHHHHHHHHHHHHHHHH---
Confidence 111111111 1222333333334444556666665544332 1333444433333332221
Q ss_pred HHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 008231 436 RRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKH 515 (573)
Q Consensus 436 ~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~ 515 (573)
.+.+.++...++.+++.+...+....+..|..|++ +++++++++...++|..+++.+.|.+.+..
T Consensus 286 -----------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~--- 350 (375)
T TIGR00899 286 -----------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERW--- 350 (375)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 12334445556777777777788888888888865 679999999999999999999999887642
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHH
Q 008231 516 WLRSNLNKGKLNNFYWLLAVLGLLNFMVF 544 (573)
Q Consensus 516 w~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 544 (573)
++...|++.+++.+++.++.
T Consensus 351 ---------g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 351 ---------SYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred ---------cchhHHHHHHHHHHHHHHHH
Confidence 12345666666666655544
No 43
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=9.2e-24 Score=219.67 Aligned_cols=336 Identities=11% Similarity=-0.035 Sum_probs=218.2
Q ss_pred HHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCc
Q 008231 53 SMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCD 132 (573)
Q Consensus 53 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (573)
.+.+.+++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++..+.+++.++++++
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~------------ 88 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA------------ 88 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH------------
Confidence 34566788899999999999999999999999999999999998 99999999999999999988886
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhh
Q 008231 133 DYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLV 212 (573)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~ 212 (573)
.+.+.++++|++.|++.+...+.....+.+++| ++ |+++.++...+.++|..+++.+.+
T Consensus 89 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~ 147 (377)
T TIGR00890 89 --------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLIT 147 (377)
T ss_pred --------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHH
Confidence 377889999999999999887777778888876 45 999999999999999988777777
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCC
Q 008231 213 YVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTE 292 (573)
Q Consensus 213 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (573)
.+.+..|||+.|++.++..++..+..++..++.++++++++ .+. ..+
T Consensus 148 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~-------------~~~ 194 (377)
T TIGR00890 148 SVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTN--------------------IEV-------------SVK 194 (377)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccC--------------------ccc-------------chh
Confidence 77778899999998877666554443333322111000000 000 000
Q ss_pred ccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccccccceec
Q 008231 293 KFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVP 372 (573)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (573)
+.+ ..+..++++........+........... ....+. +..+.+ ...
T Consensus 195 ~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~------~~~ 241 (377)
T TIGR00890 195 DYT-------------------------VWEMLRTPQFWVLYLSFFLNAVSGLLLIG-LYKPYG-QSLGLS------DGF 241 (377)
T ss_pred hhh-------------------------HHHHHcCccHHHHHHHHHHHhHHHHHHHH-HHHHHH-HHcCCC------HHH
Confidence 000 00000011111111111111111111111 111111 111111 111
Q ss_pred ccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Q 008231 373 SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWL 452 (573)
Q Consensus 373 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l 452 (573)
.+.+.....+..++..+..+++.||+.||.. +..+.++.+++++.+.... .......
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 298 (377)
T TIGR00890 242 LVLAVSISSIFNGGGRPFLGALSDKIGRQKT-----------MSIVFGISAVGMAAMLFIP------------MLNDVLF 298 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-----------hhHHHHHHHHHHHHHHHcc------------cchhHHH
Confidence 2344555566666777777888776655422 4556666666665544331 1112222
Q ss_pred HHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008231 453 VPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~ 511 (573)
....++.+++.+...+...+++.|..|++.||++.|+.+....+|+.+++.+.+.+.+.
T Consensus 299 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 299 LATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred HHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33345556666655666677888999999999999999999999999999999988754
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.93 E-value=1.3e-22 Score=214.19 Aligned_cols=390 Identities=14% Similarity=0.016 Sum_probs=239.6
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 008231 28 KTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFA 107 (573)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 107 (573)
+.+.+|++....++.++...+.+...+++++++ +++|++..+.+++.+.+.++..++.++.|+++||+ ||||++..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~ 85 (402)
T TIGR00897 8 KIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGL 85 (402)
T ss_pred HcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHH
Confidence 456677888888888888888877888888888 57899999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 108 SVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.+.+++..++....... .+.+.+++.|++.|+|.+...+...+.+.+.+|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~----------------------~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~----- 138 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLGH----------------------ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN----- 138 (402)
T ss_pred HHHHHHHHHHHHHhccC----------------------ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH-----
Confidence 99888876553211000 246677889999999988877777778889889887
Q ss_pred hHHHHHHHHHHHHHhhh-HHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHH
Q 008231 188 AMIFFFNRFYFAISIGS-LFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAW 266 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~-~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (573)
|+++.|+++.+.++|. .++|.+++++.+..||+..++......+++.+...+..++.++ ++.+.
T Consensus 139 -~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------ 203 (402)
T TIGR00897 139 -LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT--PQHMQ------------ 203 (402)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC--ccccc------------
Confidence 9999999999999996 6899999999888897766664443333333322232221110 00000
Q ss_pred hccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHH-HhHHHHHHHHHHHH
Q 008231 267 KKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMV-LKLLPIWATCILFW 345 (573)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~ 345 (573)
.+ ++ ..+..+ .+ ....+.+.. ...+..++....++
T Consensus 204 ------~~-----------------~~--~~~~~~--------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 239 (402)
T TIGR00897 204 ------TR-----------------EK--FSELGK--------------AA-----TILFTNPNVLLGGMVRIINTIGLF 239 (402)
T ss_pred ------CC-----------------cc--hhhHHH--------------HH-----HHHHcChhHHHHHHHHHHHHHHHH
Confidence 00 00 000000 00 000111111 11111222222233
Q ss_pred HHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHH
Q 008231 346 TVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIA 425 (573)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~ 425 (573)
......+.+. .. .+.+. ...+.+.....++.++..+..+++.||..+|+. . ...+.+...++
T Consensus 240 ~~~~~~p~~~-~~-~g~s~------~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~--------~--~~~~~l~~~~~ 301 (402)
T TIGR00897 240 GFAVFLPMFV-AE-LGFST------SEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT--------V--RWFGGVGCGIF 301 (402)
T ss_pred HHHHHHHHHH-HH-cCCCh------hHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH--------H--HHHHHHHHHHH
Confidence 3323333222 11 11111 122333445556667777778888776654421 0 12222222232
Q ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 426 MIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLV 505 (573)
Q Consensus 426 ~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~ 505 (573)
.+.+.... .....+.+...+..++.|++.....+. .....+..| +.||++.|+.+....+|+.++|.+.
T Consensus 302 ~~~l~~~~---------~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~ 370 (402)
T TIGR00897 302 TLALYYIP---------QHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIA 370 (402)
T ss_pred HHHHHHHH---------HccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222211 000113344455666677766655443 345556555 5799999999999999999999999
Q ss_pred HHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 008231 506 SIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLF 546 (573)
Q Consensus 506 ~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 546 (573)
+.+.+..+ ....+++.+++.+++.+...+
T Consensus 371 g~l~~~~g------------~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 371 VLFIGFFG------------AIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHhhcc------------hHHHHHHHHHHHHHHHHHHHH
Confidence 99886431 335667777777666655544
No 45
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.93 E-value=9.8e-24 Score=217.66 Aligned_cols=350 Identities=19% Similarity=0.235 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 008231 39 LGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLT 118 (573)
Q Consensus 39 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 118 (573)
+++.++..++.....+.++.++.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++.++..+.+++..++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4556667777766677777688999999999999999999999999999999999998 999999999999999966666
Q ss_pred hhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHH
Q 008231 119 SATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYF 198 (573)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 198 (573)
+++ +.+.++++|++.|++.+...+...+++.|++|+++ |++++++.+.
T Consensus 81 ~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~ 128 (352)
T PF07690_consen 81 FAS--------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSA 128 (352)
T ss_dssp HHC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHH
T ss_pred hhh--------------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccc
Confidence 542 45589999999999999999999999999999988 9999999999
Q ss_pred HHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCC
Q 008231 199 AISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPS 278 (573)
Q Consensus 199 ~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (573)
+.++|..++|.+++++.+..||+++|++.++..++..++.....++.++++++.++. ++.
T Consensus 129 ~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~------------------~~~-- 188 (352)
T PF07690_consen 129 GFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPK------------------ESE-- 188 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SST------------------TTT--
T ss_pred hhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccccc------------------ccc--
Confidence 999999999999999999899999999988877776654333333222111111000 000
Q ss_pred cchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHH-hHHHHHHHHHHHHHHhhcccchhhh
Q 008231 279 LLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVL-KLLPIWATCILFWTVYSQMTTFTVE 357 (573)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (573)
.+ ...++.. ..+...+.+... .....+.....+.......+.+ ..
T Consensus 189 -----------~~---------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 234 (352)
T PF07690_consen 189 -----------SK---------------------KPKPLKP-GFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLY-LQ 234 (352)
T ss_dssp ----------------------------------HHHCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-CC
T ss_pred -----------cc---------------------ccccccc-ccccccccchhhhhhhhhhHHHHHHHHhhcccchh-hh
Confidence 00 0001100 001111222111 1111111111222222222221 11
Q ss_pred hhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 358 QATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRR 437 (573)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~ 437 (573)
+..+.+. ....+.+..+..+..++...+.+++.+|..++. ..........++.+.+.....
T Consensus 235 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~--- 295 (352)
T PF07690_consen 235 EVLGFSG-----PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR-----------RLLIAILLLILGALGLLLLPF--- 295 (352)
T ss_dssp HHHHCCT-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHHHHHHHCCSHH---
T ss_pred hccCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----------HHHHHHHHHHHHHHHHHHHHH---
Confidence 1112110 012233344555555555667777765543321 123333333333333222210
Q ss_pred hhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHH
Q 008231 438 ETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSS 502 (573)
Q Consensus 438 ~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~ 502 (573)
..+..+.....++.|++.+...+...+++.+..|++.+|++.|+.++..++|+.++|
T Consensus 296 --------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 --------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp --------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 113344555777889999999999999999999999999999999999999999886
No 46
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=2.4e-23 Score=224.22 Aligned_cols=378 Identities=11% Similarity=0.053 Sum_probs=229.8
Q ss_pred hcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccc
Q 008231 63 DLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCI 142 (573)
Q Consensus 63 ~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (573)
+++++..+.|++.+.+.+++.++++++|+++||+ |||+++.++.++..++.+++.++.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 7899999999999999999999999999999998 9999999999988888877655321
Q ss_pred cchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhccc-chh
Q 008231 143 EANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNV-GRG 221 (573)
Q Consensus 143 ~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~-g~~ 221 (573)
.+...+++.|+++|++.+...+....+++|++|+++ |+++.++.+.+.++|.+++|++++++.+.+ ||+
T Consensus 129 ----~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~ 198 (465)
T TIGR00894 129 ----GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWP 198 (465)
T ss_pred ----cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 135678899999999999999999999999999988 999999999999999999999999999884 999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhh
Q 008231 222 WGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAA 301 (573)
Q Consensus 222 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (573)
++|++.++..++..+.++...++.++.++..+. .+ .+. .++. .+ .+.+.
T Consensus 199 ~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~-~~~----i~~~-~~----------------~~~~~-------- 247 (465)
T TIGR00894 199 MIFYVFGIVGCAWSLLWFVFPADDPSIHPCISK-FE-KKY----INSS-LQ----------------GQKGS-------- 247 (465)
T ss_pred eehhhhhHHHHHHHHHHHHHhcCCcccCCCCCH-HH-HHH----HHhh-cc----------------cccCC--------
Confidence 999988776655544444433322211111100 00 000 0000 00 00000
Q ss_pred hhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccccccceecccccchhhH
Q 008231 302 IIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLF 381 (573)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (573)
.+...+|+ ...++.......+..+.....++....+++.++.. ..+.+ ....+.+..+..
T Consensus 248 ---------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s------~~~~g~~~~~~~ 307 (465)
T TIGR00894 248 ---------TRQSLPIK----AIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISW-VLRVS------GKENGLLSSLPY 307 (465)
T ss_pred ---------CCCCCCHH----HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcC------hHHhHHHHHHHH
Confidence 00001111 00111111222222223333333333444433322 11222 113445566667
Q ss_pred HHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHH
Q 008231 382 ITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGA 461 (573)
Q Consensus 382 ~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~ 461 (573)
++.++...+.+++.|+..+|...+ .....++..+..+...+.+.+.... . ..+.+..+..+.+.+.
T Consensus 308 ~~~~i~~~~~g~l~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~l~~~ 373 (465)
T TIGR00894 308 LFAWLCSIFAGYLADFLKSSKTLS---LTAARKIFNGIGGLGPGIFAYALPY---------L--SAAFYLTIIILTLANA 373 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHHHHHH---------c--CCchHHHHHHHHHHHH
Confidence 777777888888888766553221 1111122222222222222211110 0 1122333334444444
Q ss_pred HHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHH
Q 008231 462 GEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNF 541 (573)
Q Consensus 462 ~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~ 541 (573)
+.....+..+....+..|+ .+|.+.|+.++...+|+.++|.+.|++.+..+ .+.....|++.+++.+++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~---------~~~~~~~f~~~~~~~~i~~ 443 (465)
T TIGR00894 374 VSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDS---------KNVWLIVFLIMAFVNILCV 443 (465)
T ss_pred HhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC---------chHHHHHHHHHHHHHHHHH
Confidence 4444455566666677775 89999999999999999999999887764211 1223456667777777666
Q ss_pred HHHHH
Q 008231 542 MVFLF 546 (573)
Q Consensus 542 ~~~~~ 546 (573)
+++..
T Consensus 444 i~~~~ 448 (465)
T TIGR00894 444 IFYLI 448 (465)
T ss_pred HHeee
Confidence 55443
No 47
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.92 E-value=9.2e-23 Score=213.95 Aligned_cols=177 Identities=9% Similarity=0.068 Sum_probs=151.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.++.+.+..+......+...+.+| .+.+++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++.++..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 4566777777777777766666665 45779999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+.+++++++ +.+.+++.|++.|++.+...+....++.|++|+++ |+++
T Consensus 81 ~~~l~~~~~--------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~ 128 (382)
T PRK10091 81 GNAMFTLSS--------------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAA 128 (382)
T ss_pred HHHHHHHhC--------------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHH
Confidence 999988863 67889999999999999888888888999998877 9999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
++.+..+..+|..++|.+++++.+..|||++|++.++..++..+......|
T Consensus 129 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 129 VAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999899999999887765555444333334
No 48
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.92 E-value=1.5e-22 Score=211.90 Aligned_cols=355 Identities=14% Similarity=0.101 Sum_probs=227.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+++.++.+....+....+.....+.+| ++.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++.++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 334445555555555566555555444 56778999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++.+++.++. +.+.+++.|++.|++.+...+...+++.|++|+++ |+
T Consensus 81 ~~~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~ 128 (385)
T TIGR00710 81 ALSSLGLALSN--------------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LS 128 (385)
T ss_pred HHHHHHHHHHc--------------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HH
Confidence 99988888753 56788999999999999999999999999999887 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccC
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRS 270 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (573)
+++++.+...++|..++|.+++++.+..||+++|++.++..++..+...+..|+.++++++ +....
T Consensus 129 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------- 194 (385)
T TIGR00710 129 RIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEAR-IQIST------------- 194 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc-CCHHH-------------
Confidence 9999999999999999999999999989999999887776655554444433332111100 00000
Q ss_pred CCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHHHHHHhh
Q 008231 271 HPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCILFWTVYS 349 (573)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 349 (573)
..+.. ....+.+..... +........++....
T Consensus 195 -------------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (385)
T TIGR00710 195 -------------------------YFETF----------------------LLLLKSKMFWGYALIYGASFGGFFAFFS 227 (385)
T ss_pred -------------------------HHHHH----------------------HHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 00000 000001111111 111111111112111
Q ss_pred cccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHH
Q 008231 350 QMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVS 429 (573)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~ 429 (573)
..+ .+..+..+.+ ....+.+.....++.++..++.+++.+|..+|. .+..+..+..++.+++
T Consensus 228 ~~~-~~~~~~~g~~------~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~-----------~~~~~~~~~~~~~~~~ 289 (385)
T TIGR00710 228 GAP-FVYIDIMGVS------PSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS-----------LLRMGLILFAVSAVLL 289 (385)
T ss_pred cCh-HHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-----------HHHHHHHHHHHHHHHH
Confidence 111 1111111111 112334445555666677777777766554432 2444555555555544
Q ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 430 AVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
..... ........++...++.+++.....+....+..|..| +.+|++.++.+.....++.+.+.+.+..
T Consensus 290 ~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 290 EITAI---------LGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHH---------hccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 43311 001123344555677788888888888888888887 5699999999887766555555555543
No 49
>TIGR00895 2A0115 benzoate transport.
Probab=99.92 E-value=1.4e-22 Score=212.48 Aligned_cols=382 Identities=12% Similarity=0.053 Sum_probs=230.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+++.+.......+......+. ..+..+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAA-MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 444445555555555555543 34455667788999999999999999999999999999999998 9999999999988
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.++..++.++. +.+.+++.|++.|++.+...+...+++.|++|+++ |+
T Consensus 93 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~ 140 (398)
T TIGR00895 93 SVFTLLCALAT--------------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RG 140 (398)
T ss_pred HHHHHHHHHcc--------------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hc
Confidence 88888877653 56678899999999999999999999999999887 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccC
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRS 270 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (573)
+++++.+.+.++|..+++.+++++.+..||++.|++.++..++..+......++.+....++++ +...+.. .....+.
T Consensus 141 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~ 218 (398)
T TIGR00895 141 TAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRP-ETVRRIV-NAIAPQM 218 (398)
T ss_pred hhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCH-HHHHHHH-HHHHHhc
Confidence 9999999999999999999999999999999999887554444444333333332211101100 0000000 0000000
Q ss_pred CCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh-HHHHHHHHHHHHHHhh
Q 008231 271 HPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK-LLPIWATCILFWTVYS 349 (573)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~ 349 (573)
...++ + . ....+... . +....++..... ...+.... ....++....++....
T Consensus 219 ~~~~~--~---~-----~~~~~~~~--~-------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (398)
T TIGR00895 219 QAEAQ--S---A-----LPEQKATQ--G-------------TKRSVFKALFQG--KTARITVLLWLLYFMLLVGVYFLTN 271 (398)
T ss_pred ccccc--c---c-----cccccccc--c-------------hhhHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 0 00000000 0 000000000000 00111111 1111111111111111
Q ss_pred cccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHH
Q 008231 350 QMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVS 429 (573)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~ 429 (573)
..+ .+.. ..+.+ ....+.+.....++.++..++.+++.+++.+| +...+..+..+...+.
T Consensus 272 ~~~-~~~~-~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~~ 331 (398)
T TIGR00895 272 WLP-KLMV-ELGFS------LSLAATGGALFNFGGVIGSIIFGWLADRLGPR------------VTALLLLLGAVFAVLV 331 (398)
T ss_pred HHH-HHHH-HcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH------------HHHHHHHHHHHHHHHH
Confidence 111 1111 11111 11223344455566666677777776554333 1333333333332222
Q ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 430 AVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
.... .+.+......++.+++.+...+..++++.+..|++.||++.|+.+....+|..+++.+.|++
T Consensus 332 ~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 332 GSTL-------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHh-------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 2210 12334455667888888888899999999999999999999999999999999999998764
No 50
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.92 E-value=2.9e-22 Score=210.06 Aligned_cols=158 Identities=11% Similarity=0.034 Sum_probs=138.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+.+.++.++.+.++...++..+.+.+|.|+. ++|.|..+.|++.+.+.++..+++++.|+++||+ |||+++..+..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~ 81 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHH
Confidence 3457888889999999888888888888876 6899999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++..+++++ ++.+.++++|++.|++.+...+...+.+.+..++++ |+
T Consensus 82 ~~~~~~~~~~--------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~ 129 (381)
T PRK03633 82 AAGCAGLGLM--------------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RG 129 (381)
T ss_pred HHHHHHHHHh--------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HH
Confidence 9998888876 367789999999999999988887777788888776 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGW 222 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~ 222 (573)
+++++++.+.++|..+||.+++.+.+...+..
T Consensus 130 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 161 (381)
T PRK03633 130 RLLAAYMMVYYLGTVLGQLLVSKVSTELMSVL 161 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccchH
Confidence 99999999999999999999999877543333
No 51
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.92 E-value=1.2e-22 Score=220.37 Aligned_cols=168 Identities=18% Similarity=0.132 Sum_probs=146.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
+.+|+.+..+.+..++..++.+.... +.+++.+++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITL-VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34566777777777777777765544 44567789999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+.+++.++++++ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 94 ~~~~~~~~~~~~--------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------ 141 (496)
T PRK03893 94 LFSVGTLACGFA--------------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------ 141 (496)
T ss_pred HHHHHHHHHHHH--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------
Confidence 999999888876 367789999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHH
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGT 230 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~ 230 (573)
|++++++++.+.++|..++|.+.+++.+.+||++.|++.++.
T Consensus 142 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 142 RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999875443
No 52
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=4.2e-22 Score=209.79 Aligned_cols=185 Identities=13% Similarity=0.088 Sum_probs=131.6
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHH-HHHhHHHHHhhhccchhHHHH-
Q 008231 27 SKTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLN-LLGLLGGFLADAKLGRYLTVA- 104 (573)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~G~laDr~~Grr~~~~- 104 (573)
+.+......+...+..++..++...+.+.++.|+.+++|+|.++.|++.+...+... +.++++|+ +||+ ||||.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~ 86 (393)
T PRK15011 9 SAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIV 86 (393)
T ss_pred cchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHH
Confidence 333344456777777889999988889999999999999999999999877666545 55555555 9998 9988754
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCch
Q 008231 105 IFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK 184 (573)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
.+.++.+++..+.+++. +.+.+++.+.+.+...+...|...++..|+.++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~--------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 139 (393)
T PRK15011 87 FCCLLGVLACTLFAWNR--------------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGR- 139 (393)
T ss_pred HHHHHHHHHHHHHHHhh--------------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccc-
Confidence 55555566666666652 455555444443333445667777777776665440
Q ss_pred HHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 185 EEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 185 ~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
..+...++.+.+.++|.++||.+++++.+.+|||++|++.++..++..+...+..|
T Consensus 140 ---~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 140 ---EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred ---hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 02445578888999999999999999999899999999887766555544444344
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=2.3e-22 Score=206.73 Aligned_cols=347 Identities=20% Similarity=0.265 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
+.+....+....+.+...+..+.|.+ ++|.+..+.+++.+...+...++.++.|+++||+ |||+.+.++..+..++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 34556677777888777777777764 6799999999999999999999999999999998 999999999999999998
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
++.+. .+.+.++++|++.|++.+...+...+++.|++|+++ |++.+++
T Consensus 80 ~~~~~--------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 127 (352)
T cd06174 80 LLAFA--------------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGL 127 (352)
T ss_pred HHHHh--------------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhH
Confidence 88875 267789999999999999999999999999999988 9999999
Q ss_pred HHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCC
Q 008231 196 FYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPD 275 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (573)
.+...++|..++|.+++.+.+..+|++.|++.++..++..+...+..|
T Consensus 128 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 175 (352)
T cd06174 128 FSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLR-------------------------------- 175 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 999999999999999999999889999999887766655544332110
Q ss_pred CCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchh
Q 008231 276 HPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFT 355 (573)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 355 (573)
+.....+..+.............+.+
T Consensus 176 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~- 201 (352)
T cd06174 176 -----------------------------------------------------LLLLLALAFFLLSFGYYGLLTYLPLY- 201 (352)
T ss_pred -----------------------------------------------------HHHHHHHHHHHHHhHHHHHHHHHHHH-
Confidence 00000111111111111111111111
Q ss_pred hhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 356 VEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQ 435 (573)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~ 435 (573)
..+..+.+ ....+.......++.++..++.+++.+|..+|+. .+..+.++..++++......
T Consensus 202 ~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~~~~~~~-- 263 (352)
T cd06174 202 LQEVLGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL----------LLLIGLLLAALGLLLLALAP-- 263 (352)
T ss_pred HHHhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH----------HHHHHHHHHHHHHHHHHHhc--
Confidence 11110111 1123445566667777777777777666544420 36677777777777665531
Q ss_pred HHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 008231 436 RRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKH 515 (573)
Q Consensus 436 ~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~ 515 (573)
+.+......++.+++.+...+...+++.|..|++.|++..|+.+....+|+.+++.+.+.+.+..
T Consensus 264 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~--- 328 (352)
T cd06174 264 ------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG--- 328 (352)
T ss_pred ------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence 25566778889999999999999999999999999999999999999999999999999987532
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHH
Q 008231 516 WLRSNLNKGKLNNFYWLLAVLGLLNFMVF 544 (573)
Q Consensus 516 w~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 544 (573)
+....+++.+++.+++.+..
T Consensus 329 ---------~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 329 ---------GYGGVFLILAALALLAALLL 348 (352)
T ss_pred ---------CcchHHHHHHHHHHHHHHHh
Confidence 12345666666666655543
No 54
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.92 E-value=1.4e-22 Score=222.64 Aligned_cols=333 Identities=26% Similarity=0.432 Sum_probs=261.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008231 47 ICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSM 126 (573)
Q Consensus 47 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (573)
++||++...+..|+.+.+|++.+++..+...+.....+.++++|+++|+++||++++.++.++..+|..++++++. +..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence 3689999999999999999999999999999999999999999999999999999999999999999988887532 210
Q ss_pred CCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHH
Q 008231 127 RPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLF 206 (573)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 206 (573)
. ........+++.++.++|.|++.|+..+...|+++++++ .+|.++++++++++|+|+.+
T Consensus 80 ~-----------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSli 139 (654)
T TIGR00926 80 G-----------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLI 139 (654)
T ss_pred c-----------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHH
Confidence 0 002344577889999999999999999999999986542 23899999999999999999
Q ss_pred HHHHhhhhhccc-------chhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCc
Q 008231 207 AVIVLVYVQDNV-------GRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSL 279 (573)
Q Consensus 207 ~~~~~~~l~~~~-------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (573)
++++.+++.+.. +|...|.++++.+++++++.....+.+++.++.++......+.+....+.+....+...
T Consensus 140 s~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~~-- 217 (654)
T TIGR00926 140 STIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEHW-- 217 (654)
T ss_pred HHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCccc--
Confidence 999999997443 69999999999999988887777777776666666665555555555544322111100
Q ss_pred chhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhh
Q 008231 280 LNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQA 359 (573)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (573)
...+.+.... .+ ....+++.+++++.+.+++...++|..+.|..+....+.
T Consensus 218 -------------~~~~ld~a~~-------------~~---~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa 268 (654)
T TIGR00926 218 -------------PLHWLDYAKD-------------KH---DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQA 268 (654)
T ss_pred -------------chhHHHHhcc-------------cc---ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 0112221111 01 233456778889999999999999999999999888888
Q ss_pred hccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 360 TFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQ 434 (573)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~ 434 (573)
..++.+++++.+++.+++.++++..+++.|+++..+.+..+|... ..+++.++.+|+++.++++++....+.
T Consensus 269 ~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~va~~ve~ 340 (654)
T TIGR00926 269 TRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFFVAALVQL 340 (654)
T ss_pred HHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777888999999999999999999998766666555432 367899999999999999998887643
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.92 E-value=6.4e-22 Score=208.36 Aligned_cols=172 Identities=15% Similarity=0.070 Sum_probs=143.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
.+|..+.+....++..+......+.+| ++.+++|+|..+.+++.+.+.+...++.++.|+++||+ |||+++.++..+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIA-DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 456666666666666666655555554 45678999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.++.+++.++. +.+.+++.|++.|++.+...+....+..|.+++++ ++
T Consensus 84 ~~~~~~~~~~~--------------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~ 131 (394)
T PRK11652 84 ILGTLVALFAH--------------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LR 131 (394)
T ss_pred HHHHHHHHHHc--------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HH
Confidence 99888887752 56788999999999988877777788888888776 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 236 (573)
++.++++.+..+|..++|.+++++.+..||+++|++.++..++..+
T Consensus 132 ~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 132 HANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999889999999987665544433
No 56
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.91 E-value=4.7e-22 Score=209.25 Aligned_cols=382 Identities=9% Similarity=-0.026 Sum_probs=231.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVG-DLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
|+++...+..+..... +.+.+.+.+.+.+ ++|+|.+|.+++.+++.+.+.++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~f~~~F~~-w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCV-WMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 5555554444444444 3444555556554 8999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
+.+++++++.+.+ ..++..+++.|++.|++ +...+.....+++++|+++ ||+
T Consensus 112 i~~~~~~~a~~~~---------------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~ 163 (462)
T PRK15034 112 IPCVWLGIAVQNP---------------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGS 163 (462)
T ss_pred HHHHHHHHHHccc---------------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHH
Confidence 9998888751100 02678999999999998 6677888999999999998 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhh-----c-------------ccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCC
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQ-----D-------------NVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGS 253 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~-----~-------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (573)
+.|+.....++|..+++++...+. + ..+|+.++++..+..+++.+..++..++.+. ++.
T Consensus 164 A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~ 240 (462)
T PRK15034 164 ALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRA 240 (462)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---ccc
Confidence 999997666777766655554322 2 2347776666655555554444443332111 010
Q ss_pred chhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh
Q 008231 254 PLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK 333 (573)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (573)
..++.. ...++.+..+.
T Consensus 241 ~~~~~~---------------------------------------------------------------~vlk~~~~Wll 257 (462)
T PRK15034 241 SIADQL---------------------------------------------------------------PVLQRLHLWLL 257 (462)
T ss_pred CHHHHH---------------------------------------------------------------HHhCCCchhHH
Confidence 000000 00011111111
Q ss_pred HHHHHHHHHHHHHHhh-cccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchH
Q 008231 334 LLPIWATCILFWTVYS-QMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSL 412 (573)
Q Consensus 334 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~ 412 (573)
.+ +.......|..+. .++.+.... .+ .........+..+...+..|+.+++.||+.+++.
T Consensus 258 sl-ly~~tFG~fvg~s~~lp~~~~~~---~~------~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v--------- 318 (462)
T PRK15034 258 SL-LYLATFGSFIGFSAGFAMLAKTQ---FP------DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV--------- 318 (462)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHH---cC------hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH---------
Confidence 11 1122222222222 222222111 11 0011111233445566777888999887765532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCc------------
Q 008231 413 QRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPE------------ 480 (573)
Q Consensus 413 ~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~------------ 480 (573)
+..+.+.+.++......... .....+++.....++...++.++.+...+-++.+.+|+
T Consensus 319 --l~~~~i~~~i~~~~~~l~lp--------~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~ 388 (462)
T PRK15034 319 --TLINFIFMAIFSALLFLTLP--------GTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGS 388 (462)
T ss_pred --HHHHHHHHHHHHHHHHHHhc--------cccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccc
Confidence 44444444444322222110 11122344444444444455555555666666666663
Q ss_pred ---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 481 ---------RMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMK 550 (573)
Q Consensus 481 ---------~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 550 (573)
+..|.+.|+......+|+++-|.+.+...+.+ +.+...|+.+.+..+++..+.+..+.|
T Consensus 389 ~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 389 DEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT-----------GSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc-----------CCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 25788899999999999999998888876543 334567888888999999888887654
No 57
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=7.5e-22 Score=210.63 Aligned_cols=174 Identities=12% Similarity=0.009 Sum_probs=132.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHH-HHHHHH-----HHHHHhHHHHHhhhccchhHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIV-TNFMGT-----LNLLGLLGGFLADAKLGRYLTV 103 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~-~~~~~~-----~~~~~~~~G~laDr~~Grr~~~ 103 (573)
.+++....+.++.+++.++...+ +++.+++.++++.+..+.+... +...+. ..+++++.|+++||+ |||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l 89 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLF-GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGL 89 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHH
Confidence 34556677777888888887554 5566688889999888765443 322222 235788999999999 999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCc
Q 008231 104 AIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDP 183 (573)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~ 183 (573)
+.+..++.++.++++++.+..... ......++++|+++|++.+...+....+++|++|+++
T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~- 150 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPGYATIG------------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR- 150 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHH------------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc-
Confidence 999999999999999874322000 0011257889999999999999988999999999998
Q ss_pred hHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh--------cccchhHHHHHHHH
Q 008231 184 KEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ--------DNVGRGWGYGISAG 229 (573)
Q Consensus 184 ~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~ 229 (573)
|+++.++...+.++|..+++.+++.+. +.+|||++|++..+
T Consensus 151 -----rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 -----KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 999999998888888888887777652 46799999987543
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=2.6e-22 Score=218.46 Aligned_cols=384 Identities=14% Similarity=0.077 Sum_probs=228.5
Q ss_pred HHHhhhcCCC---chhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 008231 58 TYLVGDLHLS---SAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDY 134 (573)
Q Consensus 58 ~yl~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (573)
+.+.+++|++ ..+.+++.+++.++..++.++.|+++||+ |||+++.++.++.+++.++++++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 4567899999 89999999999999999999999999998 999999999999999988888763
Q ss_pred cccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 008231 135 RRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l 214 (573)
+++.+++.|++.|++.+...+...+++.|++|+++ |+++.++...+..+|.+++|.++..+
T Consensus 179 -------------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (505)
T TIGR00898 179 -------------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFI 239 (505)
T ss_pred -------------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67789999999999999999999999999999998 99999999999999999999887766
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCcc
Q 008231 215 QDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKF 294 (573)
Q Consensus 215 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (573)
.+ ||+.|++.++..++..+..+ ..|+.++....+....+..+.+....+..+...++. ....+.+....
T Consensus 240 ~~---wr~~~~~~~i~~~~~~~~~~-~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~---- 308 (505)
T TIGR00898 240 PD---WRWLQLAVSLPTFLFFLLSW-FVPESPRWLISQGRIEEALKILQRIAKINGKKLPAE---VLSLSLEKDLS---- 308 (505)
T ss_pred hH---HHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHH---HHhhhhhhhhh----
Confidence 53 99999888776665555443 334322111111111222222222222211111100 00000000000
Q ss_pred chhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh-HHHHHHHHHHHHHHhhcccchhhhhhhccccccccceecc
Q 008231 295 KCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK-LLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPS 373 (573)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (573)
+ .++...+ ....+.+.... .+..+.........+.... . ..+ .. ....
T Consensus 309 --------------~-~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~-~~---~~~~ 357 (505)
T TIGR00898 309 --------------S-SKKQYSF-----LDLFRTPNLRKTTLCLMMLWFTTAFSYYGLV----L---DLG-NL---GGNI 357 (505)
T ss_pred --------------h-ccCCCcH-----HHHhCChHHHHHHHHHHHHHHHHHHHHHHHh----c---ccc-cc---CCCh
Confidence 0 0000011 00011111111 1111110000000000000 0 000 00 0011
Q ss_pred cccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Q 008231 374 GSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLV 453 (573)
Q Consensus 374 ~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv 453 (573)
.....+..+..+....+..++.+|+.||. .+..+.++.+++++++.... ....++.+
T Consensus 358 ~~~~~~~~~~~i~~~~~~~~l~dr~grr~-----------~~~~~~~~~~~~~l~~~~~~------------~~~~~~~~ 414 (505)
T TIGR00898 358 YLDLFISGLVELPAKLITLLLIDRLGRRY-----------TMAASLLLAGVALLLLLFVP------------VDLYFLRT 414 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHH-----------HHHHHHHHHHHHHHHHHHcC------------CCchHHHH
Confidence 11122333334444555566666555543 25556666666665554431 11122334
Q ss_pred HHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHH
Q 008231 454 PQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLL 533 (573)
Q Consensus 454 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~ 533 (573)
...++.+++.....+..+.+..|.+|++.|+++.|+.++...+|++++|.+.+ ..+. +....++++
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-------------~~~~~~~~~ 480 (505)
T TIGR00898 415 ALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-------------WLFLPLVLF 480 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-------------HHhhHHHHH
Confidence 44455566666667888899999999999999999999999999999999988 4321 112345566
Q ss_pred HHHHHHHHHHHHHHHhhcchh
Q 008231 534 AVLGLLNFMVFLFFAMKHQYN 554 (573)
Q Consensus 534 a~~~~l~~~~~~~~~~~~~~~ 554 (573)
+++.++++++.+ +.++++++
T Consensus 481 ~~~~~~~~~~~~-~lpet~~~ 500 (505)
T TIGR00898 481 GGLALLAGILTL-FLPETKGV 500 (505)
T ss_pred HHHHHHHHHHHH-cCcCCCCC
Confidence 666666655443 44665544
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.91 E-value=2.1e-21 Score=205.70 Aligned_cols=152 Identities=16% Similarity=0.069 Sum_probs=133.3
Q ss_pred HHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccc
Q 008231 59 YLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKH 138 (573)
Q Consensus 59 yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (573)
.+.+++|.+..+.++..+++.+++.++++++|+++||+ |||+++..+..+++++..+++++.
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~----------------- 102 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT----------------- 102 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC-----------------
Confidence 36789999999999999999999999999999999998 999999999999999998888763
Q ss_pred cccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhccc
Q 008231 139 HQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNV 218 (573)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~ 218 (573)
+.+.++++|+++|++.+...+....++.|.+|+++ |++.+++.+.+.++|..+||.+++++.+..
T Consensus 103 ---------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~ 167 (413)
T PRK15403 103 ---------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFV 167 (413)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67789999999999988766667788899999888 999999999999999999999999999888
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 219 GRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 219 g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
|||+.|++.++..+++.+..++..|
T Consensus 168 gw~~~f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 168 HWKVLFAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999887766665554444334
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.91 E-value=1.2e-21 Score=206.25 Aligned_cols=164 Identities=12% Similarity=0.076 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+.+..+.++..++.......++.. .+++|.+..+.+++.+.+.+.+.++.+++|+++||+ |||++++++..+.+++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHH
Confidence 45666777777777655554445544 678999999999999999999999999999999999 9999999999999888
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.+++.++. + .++.|+++|++.++..|...+++.|++|+++ |+++.
T Consensus 82 ~~~~~~~~--------------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~ 126 (393)
T PRK11195 82 CLLMLFGI--------------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKAN 126 (393)
T ss_pred HHHHHHHH--------------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 87776642 2 2678999999999999999999999999888 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAA 235 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 235 (573)
++.+...++|..+||.++|++.+. .|+.++.+.+...+++.
T Consensus 127 ~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 127 GWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999874 47777766555444443
No 61
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.91 E-value=3.6e-22 Score=213.33 Aligned_cols=159 Identities=11% Similarity=0.018 Sum_probs=130.3
Q ss_pred HHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 008231 55 NLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDY 134 (573)
Q Consensus 55 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (573)
...+++++ +|+|..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++.+++..++++..+..
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 115 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT---------- 115 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc----------
Confidence 34456665 599999999999999999999999999999998 999999999988888887776542111
Q ss_pred cccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 008231 135 RRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l 214 (573)
.+...+++.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|+.+++.+.+.+
T Consensus 116 ------------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 116 ------------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred ------------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 246677888999999999988888899999999998 99999999999999999998887764
Q ss_pred h-cccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 215 Q-DNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 215 ~-~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
. +..|||++|++.++..++..+..++..+
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4 4468999999877766665444444334
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=2.6e-22 Score=213.26 Aligned_cols=392 Identities=13% Similarity=0.033 Sum_probs=227.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..|.+....++...+++.+.++++.|+++++|+|..+.|.+.+.+.+...++++++|+++||+ |||+++.++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4566667777777788888899999999999999999999999999999999999999999998 999999887666555
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHH-HHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLA-MLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
+......... . .... ....+..+.++..+...+.....+.++.++.. ..+++
T Consensus 89 ~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~ 141 (420)
T PRK09528 89 LFGPFFIYVF-A----------------------PLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGF 141 (420)
T ss_pred HHHHHHHHHH-H----------------------HHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccc
Confidence 4432211000 0 0000 11112222233223222222233333332111 11677
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCC
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSH 271 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (573)
.++..+...++|..++|.+++++.+ .+|+++|++.++..++..+.+++..++.++++. .+. .
T Consensus 142 ~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------------~ 203 (420)
T PRK09528 142 EYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAK-VAN----------------A 203 (420)
T ss_pred cchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhh-hcc----------------c
Confidence 8888888899999999999999876 589999988777666555544443332111100 000 0
Q ss_pred CCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHH-HHHHHHHHHHHhhc
Q 008231 272 PYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLP-IWATCILFWTVYSQ 350 (573)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 350 (573)
+.++ ++... .+.. ....+++....... .......+.....+
T Consensus 204 ~~~~---------------~~~~~-~~~~----------------------~~~l~~~~~~~l~l~~~~~~~~~~~~~~~ 245 (420)
T PRK09528 204 LGAN---------------ASAVS-LKDA----------------------LALLKLPKFWFLVLYVIGVACFYDVFDQQ 245 (420)
T ss_pred hhcc---------------ccccc-HHHH----------------------HHHccCCCeEeehHHHHHHHHHHHHHHHH
Confidence 0000 00000 0000 00000111111111 11111112222222
Q ss_pred ccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHH
Q 008231 351 MTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSA 430 (573)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~ 430 (573)
.+.++.........+ ....+.+.++..+...+..+..+++.||+.+|+. +..+.++.+++++++.
T Consensus 246 ~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----------~~~~~~l~~~~~~l~~ 310 (420)
T PRK09528 246 FPNFFASFFATPEQG----TRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA-----------LLLAGTIMAVRIIGSG 310 (420)
T ss_pred HHHHHHHHHhccCcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh-----------hHHHHHHHHHHHHHHH
Confidence 232222111000000 0112344455555566667777888766655421 5556666666666555
Q ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Q 008231 431 VIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGL-FLSAISMGMFVSSMLVSIVD 509 (573)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi-~~~~~~lg~~ig~~~~~~i~ 509 (573)
+.. +.++++...++.+++.....+....++.+..|++.+++..+. +++...+|+++++.+.|++.
T Consensus 311 ~~~--------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~ 376 (420)
T PRK09528 311 FAT--------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY 376 (420)
T ss_pred hcc--------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH
Confidence 431 344556667778888777777778899999999999988766 67778899999999999988
Q ss_pred hhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 008231 510 KITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAM 549 (573)
Q Consensus 510 ~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 549 (573)
+.. | +...|.+.+++.++..++.++..+
T Consensus 377 ~~~--G----------~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 377 DSI--G----------FQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred Hhh--C----------chHHHHHHHHHHHHHHHHHHHHhc
Confidence 643 1 245666677776666655555444
No 63
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=2.8e-22 Score=208.63 Aligned_cols=157 Identities=14% Similarity=0.122 Sum_probs=136.3
Q ss_pred HHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 008231 54 MNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDD 133 (573)
Q Consensus 54 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (573)
....+++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.++++++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 3445678889999999999999999999999999999999998 999999999999999999888863
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHH-HHhh
Q 008231 134 YRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAV-IVLV 212 (573)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~-~~~~ 212 (573)
+.+.+++.|++.|++.+...+...+++.|++|+++ |++++++.+.+.++|..++| ++++
T Consensus 82 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~ 141 (379)
T TIGR00881 82 --------------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLF 141 (379)
T ss_pred --------------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHH
Confidence 57789999999999999999999999999999888 99999999999999999999 5777
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 213 YVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 213 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
.+.+..+|++.|++.++..++..+..++..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 142 GIAELYSWHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHheeeC
Confidence 7777889999998877665554444443333
No 64
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=2.5e-21 Score=194.85 Aligned_cols=388 Identities=15% Similarity=0.058 Sum_probs=265.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+.|+++.. +..+.-.+..+.+.+.+.+++.+++|+|+.|.+++.++..+.+.+..++-|.+.||+ |.|++..++.++.
T Consensus 12 ~~~~L~~S-~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWLS-TLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHH
Confidence 44455444 444444555567778888999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.+-.+..+++.+.+ +.+.+++.+++.|++.+-+ +...+++++++|+++ +|
T Consensus 90 ~IP~~~~~~a~~~~-----------------------~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~------qG 139 (417)
T COG2223 90 LIPCLGLAFAVTYP-----------------------STWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEK------QG 139 (417)
T ss_pred HHHHHHHHHHccCC-----------------------chHHHHHHHHHHhccccee-hcccccccccCChhh------hh
Confidence 99999999987655 4478999999999987776 567789999999999 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccc---hhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHh
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVG---RGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWK 267 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (573)
.+.|++. +.|+|..+...++.++....| |+.+..+..+.++++.+..++..++.+.+++..++...
T Consensus 140 ~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---------- 208 (417)
T COG2223 140 LALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---------- 208 (417)
T ss_pred HHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch----------
Confidence 9999999 999999999999999999888 99888877777777666555544433222111111000
Q ss_pred ccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHH
Q 008231 268 KRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTV 347 (573)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 347 (573)
+ ..+.+...+....+..++..+...+..
T Consensus 209 ------------------------------~----------------------~~~~v~~~~~~W~lsllY~~tFG~Fvg 236 (417)
T COG2223 209 ------------------------------A----------------------QLKAVFSNKDTWLLSLLYFATFGGFVG 236 (417)
T ss_pred ------------------------------h----------------------HHHHHhcCcchHHHHHHHHHHHHHHHH
Confidence 0 001111111112222233333333333
Q ss_pred hh-cccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHH
Q 008231 348 YS-QMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAM 426 (573)
Q Consensus 348 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~ 426 (573)
+. +.+.++..+. ..+ ....+.+.+..++...+.-|+.+++.||++.++. +......+.++.
T Consensus 237 fs~~l~~~~~~~f-g~~------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv-----------~~~~f~~~~~~~ 298 (417)
T COG2223 237 FSAYLPMYLVTQF-GLS------PVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV-----------TLAVFVGMALAA 298 (417)
T ss_pred HHHHHHHHHHHhc-CCC------hhhHHHHHHHHHHHHHHHHhccchhhhhccchhH-----------HHHHHHHHHHHH
Confidence 32 2222332221 111 2334456666667777778888999888766643 344444455555
Q ss_pred HHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 427 IVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVS 506 (573)
Q Consensus 427 i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~ 506 (573)
.+..+.... ..+..+.+..+..++..++..+..+...+-.+...+|+ +.|...|+......+|++.-|...+
T Consensus 299 ~~l~~~~~~-------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g 370 (417)
T COG2223 299 ALLSLFLTG-------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFG 370 (417)
T ss_pred HHHHccccc-------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHH
Confidence 444443100 11123444444445555666666666777777777765 5888999999999999999999999
Q ss_pred HHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 507 IVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMK 550 (573)
Q Consensus 507 ~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 550 (573)
...+.+ +.....|+++..+.+++.+.++..+.|
T Consensus 371 ~~~~~t-----------g~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 371 VSLDLT-----------GSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHhc-----------ccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888765 345678888898888888888776654
No 65
>PRK11043 putative transporter; Provisional
Probab=99.90 E-value=4.5e-21 Score=202.42 Aligned_cols=160 Identities=16% Similarity=0.126 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHH--HhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 008231 48 CAMGISMNLVTY--LVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPS 125 (573)
Q Consensus 48 ~~~~~~~~l~~y--l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (573)
.+.+...++|.+ +.+++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++..+..+..++..++.++.
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~---- 92 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE---- 92 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc----
Confidence 333333444433 6789999999999999999999999999999999998 999999999999888888887753
Q ss_pred CCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhH
Q 008231 126 MRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSL 205 (573)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 205 (573)
+.+.+++.|++.|++.+...+...+++.|++|+++ +++.++..+...++|..
T Consensus 93 ----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 144 (401)
T PRK11043 93 ----------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPA 144 (401)
T ss_pred ----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHH
Confidence 56788999999999988877777889999999887 88899998888999999
Q ss_pred HHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 206 FAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 206 ~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
++|.+++++.+.+||++.|++..+..++..+..+.
T Consensus 145 ~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 145 LAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998877666555444333
No 66
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=5.5e-22 Score=210.03 Aligned_cols=376 Identities=16% Similarity=0.191 Sum_probs=247.9
Q ss_pred hcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccc
Q 008231 63 DLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCI 142 (573)
Q Consensus 63 ~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (573)
+++++..|.+++.+.+..++.++++++|+++||+ |-|+++.++.++.++++++..++..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999999 9999999999999999999998754
Q ss_pred cchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcc-cchh
Q 008231 143 EANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDN-VGRG 221 (573)
Q Consensus 143 ~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~-~g~~ 221 (573)
.+.+.+++.|+++|++.|...|+...+.+.|.|++| |++..++.+.+..+|.+++.+++|++.+. +||+
T Consensus 126 ----~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~ 195 (466)
T KOG2532|consen 126 ----IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWP 195 (466)
T ss_pred ----hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCc
Confidence 234577999999999999999999999999999999 99999999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhh
Q 008231 222 WGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAA 301 (573)
Q Consensus 222 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (573)
++|++.++..++-.+++++...+.+.+++.-+. +++...++.+.+...+
T Consensus 196 sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~-----------------------~El~~I~~~k~~~~~~-------- 244 (466)
T KOG2532|consen 196 SIFYVFGIVGLIWFILWFLFYSDSPSKHPNISE-----------------------KELKYIEKGKSEAHVK-------- 244 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCH-----------------------HHHHHHHhcccccccC--------
Confidence 999998887766665555444433222221110 0000000000000000
Q ss_pred hhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccccccceecccccchhhH
Q 008231 302 IIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLF 381 (573)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (573)
.+...||+.. .++.......+..+.-...++...++.++++.. ..+++.. .++++.+++.
T Consensus 245 ---------~~~~vP~~~i----~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~-VL~f~v~------~~G~~salP~ 304 (466)
T KOG2532|consen 245 ---------KKPPVPYKAI----LTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKE-VLGFDVR------ETGFLSALPF 304 (466)
T ss_pred ---------CCCCCCHHHH----HcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HhCCChh------hhhHHHHHHH
Confidence 0013455211 011111222223333344444444445544432 2233322 4677888888
Q ss_pred HHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHH--HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHH
Q 008231 382 ITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIA--MIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLV 459 (573)
Q Consensus 382 ~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~--~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~ 459 (573)
+...+...+.+++.|++.+| ..+ .+..+++.-.....+.+ ++.+++.. ..+ . + ........
T Consensus 305 l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~----------~~~-~-~-~a~~~l~~ 367 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTS----------DEH-R-L-LAVILLTI 367 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecC----------CCc-c-h-HHHHHHHH
Confidence 88888888888888887766 321 34455555444444444 44444331 111 1 1 12222222
Q ss_pred HHHHHhhh-hhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCccccccccchhhHHHHHHHHHH
Q 008231 460 GAGEAFVY-VGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKI-TNKHWLRSNLNKGKLNNFYWLLAVLG 537 (573)
Q Consensus 460 g~~~~~~~-~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~-~~~~w~~~~~~~~~~~~~~~~~a~~~ 537 (573)
+.+..... +..+.-..+.+| +..+..+|+.+....+.++++|.+++.+.+. +..+| ..+|++.+++.
T Consensus 368 ~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW----------~~VF~i~a~i~ 436 (466)
T KOG2532|consen 368 AIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEW----------RIVFLIAAGIL 436 (466)
T ss_pred HHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHH----------HHHHHHHHHHH
Confidence 22333333 333333333355 6699999999999999999999999988741 11344 46788888888
Q ss_pred HHHHHHHHHHH
Q 008231 538 LLNFMVFLFFA 548 (573)
Q Consensus 538 ~l~~~~~~~~~ 548 (573)
+++.+++.++.
T Consensus 437 ~~~~i~f~~f~ 447 (466)
T KOG2532|consen 437 IVGNIIFLFFG 447 (466)
T ss_pred HHhchheeEee
Confidence 88887776664
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.90 E-value=8.4e-21 Score=199.10 Aligned_cols=364 Identities=9% Similarity=0.028 Sum_probs=226.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH-HHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV-TALVV 114 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~-~~~~~ 114 (573)
+.+....+....++-...+++|.|++ ++|+|..+.+++.+.+.+...+++++.|+++||+ ||++.......+ ..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 44555556666666667788888885 7899999999999999999999999999999998 885433222111 11111
Q ss_pred H-HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 115 G-LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 115 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
+ ++..+ ++++.+++.|.+++.+.+...|...++..+. +++ |++.+
T Consensus 85 ~~~~~~~--------------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~ 130 (382)
T TIGR00902 85 AAFSAGA--------------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDY 130 (382)
T ss_pred HHHHHhh--------------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCc
Confidence 1 22222 3677888999999998888888887776543 344 88999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCC
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPY 273 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (573)
+..+...++|.+++|.+++++.+.+|||..|++..+..++.. ......++.+++++ +++
T Consensus 131 g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~------------------- 189 (382)
T TIGR00902 131 GKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTIPPKDA-IPE------------------- 189 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCCCCCcc-ccc-------------------
Confidence 999999999999999999999999999999887654432222 22222221110000 000
Q ss_pred CCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccc
Q 008231 274 PDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTT 353 (573)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 353 (573)
++ ..+. ..+ ....++++.....+..++........+...+.
T Consensus 190 ~~--------------~~~~---------------------~~~----~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 230 (382)
T TIGR00902 190 DE--------------SQGD---------------------SAF----IALLKNPMNLRFLAAVCLIQGAHAAYYGFSAI 230 (382)
T ss_pred cc--------------cccc---------------------hhH----HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000 000 00011111112222222222222222222222
Q ss_pred hhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 008231 354 FTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIE 433 (573)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~ 433 (573)
+. .. .+.+ ....+.+..+..+..++...+.+++. +|. +..+.+..+.++..+..+.+...+
T Consensus 231 ~l-~~-~g~s------~~~~g~l~~~~~~~~i~~~~~~~~l~----~r~-------g~~~~l~~~~~~~~~~~~~~~~~~ 291 (382)
T TIGR00902 231 YW-QA-AGIS------ASATGLLWGIGVLAEIIIFAFSNKLF----QNC-------SARDLLLISAIACVGRWAIIGAIE 291 (382)
T ss_pred HH-HH-CCCC------HhHHHHHHHHHHHHHHHHHHHhHHHH----hhC-------CHHHHHHHHHHHHHHHHHHHHhHh
Confidence 11 11 1111 11223334445555555555555554 442 233446778888888877766542
Q ss_pred HHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhh
Q 008231 434 QQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFL-SAISMGMFVSSMLVSIVDKIT 512 (573)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~-~~~~lg~~ig~~~~~~i~~~~ 512 (573)
+.+.++...+++++.++...+....++.+. |++.+++++++++ ....+|..+++.+.|++.+..
T Consensus 292 --------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 292 --------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455666678999999999999999999988 9999999999987 567899999999999998642
Q ss_pred ccCccccccccchhhHHHHHHHHHHHHHHH
Q 008231 513 NKHWLRSNLNKGKLNNFYWLLAVLGLLNFM 542 (573)
Q Consensus 513 ~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~ 542 (573)
+ ...|+..+++.+++.+
T Consensus 357 g-------------~~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 357 G-------------AGTFVFMAIIAAAAFF 373 (382)
T ss_pred c-------------HHHHHHHHHHHHHHHH
Confidence 1 2456667776665543
No 68
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.90 E-value=4.8e-21 Score=200.26 Aligned_cols=159 Identities=16% Similarity=0.125 Sum_probs=137.9
Q ss_pred HHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 008231 51 GISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQ 130 (573)
Q Consensus 51 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (573)
...+.+|.+. +++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++..+..+.+++..++.++.
T Consensus 9 ~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~--------- 77 (377)
T PRK11102 9 MYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ--------- 77 (377)
T ss_pred HHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc---------
Confidence 4456666665 57999999999999999999999999999999998 999999999999999998888753
Q ss_pred CccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 008231 131 CDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIV 210 (573)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~ 210 (573)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.+...++|..++|.+
T Consensus 78 -----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 78 -----------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 56788899999999999998999999999999888 9999999999999999999999
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 211 LVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 211 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
++++.+..||++.|++.++..++..+...+..+
T Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 135 GGWLLVWFSWHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999899999998877766655544443333
No 69
>PRK10133 L-fucose transporter; Provisional
Probab=99.90 E-value=1.2e-20 Score=201.09 Aligned_cols=154 Identities=16% Similarity=0.096 Sum_probs=124.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
....+..+.+..+...+........+ +.+++++|+|..+.+++.+.+.+++.+++++.|++.||+ |||+++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~-p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 44455555555566556654444444 456999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++.+++..+... +++..++++|+++|+|.+...+...+++.|..|+++ |.
T Consensus 102 ~~~~~l~~~~~~a-----------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~ 152 (438)
T PRK10133 102 ALGAALFWPAAEI-----------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GH 152 (438)
T ss_pred HHHHHHHHHHHhc-----------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HH
Confidence 9999876421100 367789999999999999999999999998766555 66
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhh
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQ 215 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~ 215 (573)
...++.+....+|..+||.+++.+.
T Consensus 153 ~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 153 FRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888899999999998887543
No 70
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.89 E-value=1.7e-20 Score=202.04 Aligned_cols=358 Identities=15% Similarity=0.077 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+..+.++.++.+++.+....-++-+ ..++.-|+...+++.....+...+..+++|.++||+ .|||+++.+-.+.++.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wl-v~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWL-VTQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHH
Confidence 34444455555555554433334433 335677899999999999999999999999999999 9999999998877766
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.+.+++..... ..+.+.+++..++.|++.+...|+..+++.|..|+++ ...+.
T Consensus 89 ~~~L~~l~~~~---------------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~ 141 (524)
T PF05977_consen 89 ALLLAVLAFFG---------------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAAN 141 (524)
T ss_pred HHHHHHHHHhC---------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHH
Confidence 55554432111 1367788888999999999999999999999999988 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCC
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPY 273 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (573)
++.+...|+...+||.++|.+....|-.++|.+.++..++..+.+...+++.++++..+++.....+.
T Consensus 142 al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e~~~~~l~~------------ 209 (524)
T PF05977_consen 142 ALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLPRERFFSALRE------------ 209 (524)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchhhhhhhHHH------------
Confidence 99999999999999999999998899999999888877665554444333221111111110000000
Q ss_pred CCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHH-HHHHHHHHHHHHhhccc
Q 008231 274 PDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLL-PIWATCILFWTVYSQMT 352 (573)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 352 (573)
.+ ..+...+.+...+ ..+++......... ..
T Consensus 210 ------------------------------------------G~-----ryv~~~~~l~~~l~~~~~~~l~~~a~~a-Ll 241 (524)
T PF05977_consen 210 ------------------------------------------GL-----RYVRSSPPLRSVLLRSFLFNLFASAVWA-LL 241 (524)
T ss_pred ------------------------------------------HH-----HHHhcchHHHHHHHHHHHHHHhhhHHHH-hh
Confidence 00 0000111111111 11111111111111 11
Q ss_pred chhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHH
Q 008231 353 TFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVI 432 (573)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~ 432 (573)
+.+..+..+.+ ....+.+.++..++.++.+.+..++ .+|. +..+.+..+.++.+++++.+++.
T Consensus 242 Pl~a~~~l~~~------a~~yGll~a~~gvGai~Gal~~~~l----~~~~-------~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 242 PLFARDVLGGG------ASGYGLLLAAFGVGAILGALLLPRL----RRRL-------SSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred hHHHHHHhCCc------HHHHHHHHHHHHHHHHHHHHHHHHh----hccc-------CcchhhHHHHHHHHHHHHHHhcc
Confidence 12222211111 1123445566666666666655554 2221 12233566666667666666554
Q ss_pred HHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008231 433 EQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~ 511 (573)
. +.+...+.+++.|++....+....+.+++..|+++||+..+++.+....+..+|..+.|.+.+.
T Consensus 305 ~--------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~ 369 (524)
T PF05977_consen 305 P--------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH 369 (524)
T ss_pred h--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 4555667778889999999999999999999999999999999999999999999999998764
No 71
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.89 E-value=4.4e-22 Score=201.68 Aligned_cols=186 Identities=18% Similarity=0.126 Sum_probs=167.4
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHH
Q 008231 26 RSKTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAI 105 (573)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 105 (573)
.+.+..++.+.+++.+.++++++-|.+...+ .-+++.+|++++..|++..++.+.+.++.|+.|+++||| .||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEee
Confidence 4455666788899999999999999887744 466889999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchH
Q 008231 106 FASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKE 185 (573)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
|..++.++.++++++ ..++.+.+.|.+.|+|.+.+.|.++++++|.+|+++
T Consensus 104 G~~iW~~Av~~~~fs--------------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~--- 154 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFS--------------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK--- 154 (493)
T ss_pred HHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh---
Confidence 999999999999987 478999999999999999999999999999999998
Q ss_pred HHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 186 EKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 186 ~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
|+++++++|+++++|..+|.++++.+....+ |||.|+..+++.++..++.+++.++.
T Consensus 155 ---Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 155 ---RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred ---hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 9999999999999999999999999988777 99999998888777766665555543
No 72
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.89 E-value=3.6e-20 Score=194.90 Aligned_cols=172 Identities=14% Similarity=0.047 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 008231 38 ILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLL 117 (573)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 117 (573)
.....+....+.....+.+| .+.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+.+.++..+.+++..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHH
Confidence 34444445555544444444 55678999999999999999999999999999999998 99999999999999988888
Q ss_pred HhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHH
Q 008231 118 TSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFY 197 (573)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 197 (573)
..+. +.+.++++|++.|++.+...+...+++.|.+|+++ |+++.++.+
T Consensus 86 ~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 133 (392)
T PRK10473 86 SLAE--------------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLN 133 (392)
T ss_pred HHhC--------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 7753 56678889999999999988889999999999888 999999999
Q ss_pred HHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 198 FAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 198 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
...++|..++|.+++++.+..||++.|++.++..++..+......+
T Consensus 134 ~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 179 (392)
T PRK10473 134 GITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILK 179 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999888889999998877665555444333333
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.89 E-value=1.6e-20 Score=197.88 Aligned_cols=388 Identities=11% Similarity=0.018 Sum_probs=231.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
|.+|......++...++....++++.|+++++|+|..+.+++.+.+.+...+++++.|+++||+ |||+.++.+....++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567788888888888888999999999999999999999999999999999999999999998 999999887766655
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..........+. ........+++++++.|++.+...+....+..|..+ + ++..
T Consensus 81 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~ 134 (396)
T TIGR00882 81 LFAPFFIYVFGPL------------------LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNFE 134 (396)
T ss_pred HHHHHHHHHhhhH------------------HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------cccc
Confidence 4433221100000 000123345667888888888887777776655322 2 4456
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCC
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHP 272 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (573)
++..+...++|..+||.+++.+.+ .+|+.+|++.++..++..+..+...++.++ ++..+ +..+
T Consensus 135 ~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------------~~~~ 197 (396)
T TIGR00882 135 YGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPS----SATVA------------NALG 197 (396)
T ss_pred cchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCch----hhhhh------------cccc
Confidence 677778889999999999998865 699999998877666554444333322111 00000 0000
Q ss_pred CCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHH-HHhhcc
Q 008231 273 YPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFW-TVYSQM 351 (573)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~ 351 (573)
. ..+..+..+ ..+..+.|...............+ ....+.
T Consensus 198 ~----------------~~~~~~~~~-----------------------~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 238 (396)
T TIGR00882 198 A----------------NASAFSLKL-----------------------ALELFRQRKFWMFVLYVVGVACVYDVFDQQF 238 (396)
T ss_pred c----------------ccCCCCHHH-----------------------HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000 000001111111111111111111 121222
Q ss_pred cchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHH
Q 008231 352 TTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAV 431 (573)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~ 431 (573)
+.++.......... ....+.+.++..+...+.....+++.+|..+|+ .+..+.++.+++++....
T Consensus 239 ~~y~~~~~~~~~~~----~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~-----------~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 239 ANFFTSFFATPQQG----TRVFGYVTTMGELLNALIMFCAPLIINRIGAKN-----------ALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred HHHHHHhccccccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-----------hHHHHHHHHHHHHHHHHh
Confidence 22222111000000 001233344444555555566666655554442 255666666666554433
Q ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHH-HHHHHHHHHHHHHHHHHHHhh
Q 008231 432 IEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGL-FLSAISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi-~~~~~~lg~~ig~~~~~~i~~ 510 (573)
. .+.+++++..++.+++..........+..+..|++.+++..+. ++....+|+.+++.+.|++.+
T Consensus 304 ~--------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~ 369 (396)
T TIGR00882 304 A--------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD 369 (396)
T ss_pred c--------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH
Confidence 2 1344556667778887766666666777888888888887776 678899999999999999986
Q ss_pred hhccCccccccccchhhHHHHHHHHHHHHHHHHH
Q 008231 511 ITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVF 544 (573)
Q Consensus 511 ~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 544 (573)
.. ++...|.+.+++.++..++.
T Consensus 370 ~~------------G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 370 SI------------GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred hc------------ccHHHHHHHHHHHHHHHHHH
Confidence 42 13456666666666655544
No 74
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.88 E-value=1.9e-20 Score=199.78 Aligned_cols=355 Identities=14% Similarity=0.106 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhH-HHHHHHHHHHHHHHHH
Q 008231 42 ELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK---LGRYL-TVAIFASVTALVVGLL 117 (573)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~~~~~~~ 117 (573)
.+..++.+..+.++++.|+++++|+|+.++|.+.++..+...+..|+.|+++||. +|||| .++++....+++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 3455566666778899999999999999999999999999999999999999983 27755 5667777788777777
Q ss_pred HhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCC-CCchHHHhHHHHHHHH
Q 008231 118 TSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDT-SDPKEEKAMIFFFNRF 196 (573)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~ 196 (573)
....+... ......+++.+++.+++.+....+..++..|..++ ++ |++..++.
T Consensus 88 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~~ 141 (437)
T TIGR00792 88 FTTPDFSA--------------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTFR 141 (437)
T ss_pred HhCCCCCc--------------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHHH
Confidence 66432110 02345566677788888888888888888898753 44 99999998
Q ss_pred HHHHHhhhHHHHHHhhhhh-------cccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhcc
Q 008231 197 YFAISIGSLFAVIVLVYVQ-------DNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKR 269 (573)
Q Consensus 197 ~~~~~ig~~~~~~~~~~l~-------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
+.+.++|..+++.+.+.+. +..||++++.+.++..++..+...+..++.+++.++.+
T Consensus 142 ~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~---------------- 205 (437)
T TIGR00792 142 RFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNI---------------- 205 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc----------------
Confidence 8888888887776665554 24589998887777665554444443332211000000
Q ss_pred CCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhh
Q 008231 270 SHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYS 349 (573)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 349 (573)
+++.+..+.. +...+.|.....+...+.....+....
T Consensus 206 ---------------------~~~~~~~~~~----------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (437)
T TIGR00792 206 ---------------------EKKLSLKQIF----------------------KALFKNDQLLILCLAYLFYNLAFNIKN 242 (437)
T ss_pred ---------------------ccCCCHHHHH----------------------HHHhCCHHHHHHHHHHHHHHHHHHHHc
Confidence 0000000000 001111222221111111111111111
Q ss_pred cccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHH
Q 008231 350 QMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVS 429 (573)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~ 429 (573)
....++.... .. . ....+.+..+..++.++..++.+++.+|+.+|. .+..+.++..++++.+
T Consensus 243 ~~~~~~~~~~--~~-~----~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~-----------~~~~~~~~~~~~~~~~ 304 (437)
T TIGR00792 243 GVQVYYFTYV--LG-D----PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI-----------LFAGGILLMVLGYLIF 304 (437)
T ss_pred chhheeEeee--cC-C----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----------HHHHHHHHHHHHHHHH
Confidence 1111111111 01 0 111223344455666677777777766554432 2566666666666655
Q ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccC-------chhHHHHHHHHHHHHHHHHHHHH
Q 008231 430 AVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGP-------ERMKSMSTGLFLSAISMGMFVSS 502 (573)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p-------~~~rg~~~gi~~~~~~lg~~ig~ 502 (573)
.+.. .+.+.+++..++.+++.+...+..++++.|..| ++.+|.+.|++++...+|+.+++
T Consensus 305 ~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~ 371 (437)
T TIGR00792 305 FFAG-------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAG 371 (437)
T ss_pred HHcc-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 4421 133444556677888888888888888888765 56789999999999999999999
Q ss_pred HHHHHHhhhh
Q 008231 503 MLVSIVDKIT 512 (573)
Q Consensus 503 ~~~~~i~~~~ 512 (573)
.+.|.+.+..
T Consensus 372 ~i~g~ll~~~ 381 (437)
T TIGR00792 372 FLVGLILGII 381 (437)
T ss_pred HHHHHHHHHc
Confidence 9999998754
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=4.6e-20 Score=195.64 Aligned_cols=385 Identities=14% Similarity=0.068 Sum_probs=225.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccch-hHHHHHHHHHHHHHHH
Q 008231 37 LILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGR-YLTVAIFASVTALVVG 115 (573)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~~~~~~~~~~~ 115 (573)
-+.+..++...++-...++++.|+.+++|+|..|.|++.+.+.++..++++++|+++||+ || |+++.++..+.+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Confidence 355666667777767789999999999999999999999999999999999999999998 55 7788888888777777
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCcccccccccccc--------CCCCCCCchHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGS--------DQFDTSDPKEEK 187 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~--------~~~~~~~~~~~~ 187 (573)
+..+.+ +++.+++.|++.+++.+...+...++.. |......
T Consensus 85 ~~~~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~----- 133 (418)
T TIGR00889 85 FAAQVT--------------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP----- 133 (418)
T ss_pred HHHHhc--------------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC-----
Confidence 776652 4667788888888877666555444322 2122112
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCC-CchhHHHHHHHHHH
Q 008231 188 AMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRG-SPLTVIWRVLLLAW 266 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 266 (573)
|.+.+| .+|..+||.+++.+.....|. +|++.++..++..+. .+..|+.++.++++ ....+
T Consensus 134 -~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~--------- 195 (418)
T TIGR00889 134 -PIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIKV--------- 195 (418)
T ss_pred -Ceeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccCHHH---------
Confidence 444444 478888888888884433344 455555544444433 22333321100000 00000
Q ss_pred hccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh-HHHHHHHHHHHH
Q 008231 267 KKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK-LLPIWATCILFW 345 (573)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~ 345 (573)
. .++ ......+.++... .+..++......
T Consensus 196 --------------------------~---------------------~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~ 225 (418)
T TIGR00889 196 --------------------------M---------------------LGL---DAFILFKNKRMAIFFFFSMLLGAPLQ 225 (418)
T ss_pred --------------------------H---------------------hhh---hHHHHhcCCCeeeHHHHHHHHHhHHH
Confidence 0 000 0000000111111 111111111111
Q ss_pred HHhhcccchhhhhhhccccccc-cce-ecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHH
Q 008231 346 TVYSQMTTFTVEQATFMNRKIG-SFT-VPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSV 423 (573)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~ 423 (573)
..+...+.+.... +.+.... +.. ...+...++..+..++.....+++.||+.+|+ .+..+.++.+
T Consensus 226 ~~~~~~~~~~~~~--g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~-----------~l~~~~~~~~ 292 (418)
T TIGR00889 226 ITNIFGNGFLHEF--GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK-----------VMLLSLVAWA 292 (418)
T ss_pred HHHHhHHHHHHHh--cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----------HHHHHHHHHH
Confidence 1111111111110 1010000 000 11233444555555666666777766654442 2666777776
Q ss_pred HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHH-HHHHHHHHHHH
Q 008231 424 IAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFL-SAISMGMFVSS 502 (573)
Q Consensus 424 i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~-~~~~lg~~ig~ 502 (573)
++++++.... ......+.+++..++.+++++...+....++.|.+|++.||+++|+.+ ....+|+.+|+
T Consensus 293 v~~~l~~~~~----------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp 362 (418)
T TIGR00889 293 LRFGFFAYGD----------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGY 362 (418)
T ss_pred HHHHHHHHcC----------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 6665554421 111123445566788889888888888899999999999999999997 56889999999
Q ss_pred HHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 503 MLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMK 550 (573)
Q Consensus 503 ~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 550 (573)
.+.|++.+..+. .+..++...|.+.+++.+++.+.++++.++
T Consensus 363 ~l~G~l~~~~g~------~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 363 ILSGVMVEKMFA------YGTFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHHhcc------ccCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998875320 000123456777777777777777777654
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.88 E-value=3.3e-20 Score=221.42 Aligned_cols=361 Identities=12% Similarity=0.076 Sum_probs=220.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCch--hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSA--KSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+.+...+++.++..++..+....+..++...++.+.. ..+++.+++.+++.++++++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 4555566666666666655666666677666666544 468889999999999999999999999 9999999988776
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++.+++.++... .+++.++++|++.|++.+...+...++++|++|+++ |+
T Consensus 88 ~~~~~~~~~~~~~-----------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~ 138 (1146)
T PRK08633 88 VGLTLLIVLAYYL-----------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LS 138 (1146)
T ss_pred HHHHHHHHHHHHH-----------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------ch
Confidence 6665554443110 257789999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcc--------c-chhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDN--------V-GRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRV 261 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~--------~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (573)
+++++...+.++|.++|+++++++.+. + +|.+.+.+..+...+..+++.+..++.+...+....
T Consensus 139 ~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 211 (1146)
T PRK08633 139 RANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFD------- 211 (1146)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccc-------
Confidence 999999999999999999999999875 2 344444333332222222222222322111100000
Q ss_pred HHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh-HHHHHHH
Q 008231 262 LLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK-LLPIWAT 340 (573)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~ 340 (573)
....... .. .. ..+ ....+.+.+.. .+...+.
T Consensus 212 ----------------------------~~~~~~~-~~--~~-----------~~~-----~~l~~~~~~~~~~~~~~~~ 244 (1146)
T PRK08633 212 ----------------------------KKKYLFP-KL--LW-----------RNL-----KLLRSDRVLWLAIIGLSYF 244 (1146)
T ss_pred ----------------------------ccccccH-HH--HH-----------HHH-----HHHhcCcHHHHHHHHHHHH
Confidence 0000000 00 00 000 00001111111 1111111
Q ss_pred HHHHHHHhhcccchhhhhhhcccccccccee-cccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHH
Q 008231 341 CILFWTVYSQMTTFTVEQATFMNRKIGSFTV-PSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGL 419 (573)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~ 419 (573)
....+.....++.++.. ..+.+ .. ..+.+.....++.++...+.+++.++..++ ..+.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~-~~g~s------~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----------~~~~~~~ 306 (1146)
T PRK08633 245 WFISQLAQANFPAYAKE-VLGLD------NTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----------GLVPLGA 306 (1146)
T ss_pred HHHHHHHHHhhHHHHHH-HhCCC------cHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----------cchhHHH
Confidence 11111111112111111 11111 11 233445555566666666666665443222 1245555
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHH
Q 008231 420 IFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMF 499 (573)
Q Consensus 420 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ 499 (573)
++++++++++.+.. +.+++++..++.|++.++..+...+++.+.+|++.||+++|+.++...+|..
T Consensus 307 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~ 372 (1146)
T PRK08633 307 LGLALSLFLLPTAP--------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGML 372 (1146)
T ss_pred HHHHHHHHHHHHhh--------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHH
Confidence 66655655554431 3445566778888888888888899999999999999999999999999998
Q ss_pred HHHHHHHHHh
Q 008231 500 VSSMLVSIVD 509 (573)
Q Consensus 500 ig~~~~~~i~ 509 (573)
+++.+.+.+.
T Consensus 373 ~~~~~~~~l~ 382 (1146)
T PRK08633 373 LFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHH
Confidence 8877766554
No 77
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.88 E-value=8.9e-21 Score=197.22 Aligned_cols=160 Identities=18% Similarity=0.098 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+...+..+....+.+...+.+|.++++++|+|..+.+++.+.+.++..++++++|+++||+ |||+++.++.++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345666677777777777778888789999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.++++++. .+.+.++++|+++|++.+.. +...++++|++|+++ |+++.
T Consensus 81 ~~~~~~~~-------------------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~ 128 (366)
T TIGR00886 81 CLWAGLAV-------------------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTAL 128 (366)
T ss_pred HHHHHHHh-------------------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHH
Confidence 98888762 15778889999999986654 556789999999888 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhc----------ccchhHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQD----------NVGRGWGYGI 226 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~----------~~g~~~~f~~ 226 (573)
++.....++|..+++.+++.+.. ..+||+.|++
T Consensus 129 ~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 129 GLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 99988888888888877776654 2489999843
No 78
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.88 E-value=1.6e-19 Score=195.39 Aligned_cols=388 Identities=11% Similarity=0.033 Sum_probs=235.9
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhcc----chhHH-H
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKL----GRYLT-V 103 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~----Grr~~-~ 103 (573)
+.++|+.+.++...+......+...+.+|.++. +.|.+..+.+.. +...... ++.+++|+++||+. |||+. +
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~l 84 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWL 84 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHH
Confidence 334555677777777777777777788888877 459999999886 3333333 68899999999951 78875 6
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCc
Q 008231 104 AIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDP 183 (573)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~ 183 (573)
..+.++.+++...+++... ..+++.+.+.+++.+++.+...+...++..|++|+++
T Consensus 85 l~~~i~~~~~~~~~a~~~~-----------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~- 140 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLEP-----------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE- 140 (491)
T ss_pred HHHHHHHHHHHHHHHHcCC-----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh-
Confidence 5777777777777766421 1357778888999999999999999999999999888
Q ss_pred hHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhc-ccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHH
Q 008231 184 KEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQD-NVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVL 262 (573)
Q Consensus 184 ~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (573)
|+++.++...+.++|..+++.+++++.+ ..|||.+|++.++..++..+..++ .|+.+..+++.+...
T Consensus 141 -----rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~~~------ 208 (491)
T PRK11010 141 -----RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTIPVPKTLE------ 208 (491)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccchh------
Confidence 9999999999999999999999999988 579999999887766655444333 232111000000000
Q ss_pred HHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHH
Q 008231 263 LLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCI 342 (573)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 342 (573)
+ +..+ ++ .+ ..++.+........+....
T Consensus 209 -----------------------------~--~~~~-----------------~l---~~-~~~~~~~~~~ll~~~l~~~ 236 (491)
T PRK11010 209 -----------------------------Q--AVVA-----------------PL---RD-FFGRNNAWLILLLIVLYKL 236 (491)
T ss_pred -----------------------------h--hHHH-----------------HH---HH-HHcCcCHHHHHHHHHHHHH
Confidence 0 0000 00 00 0001111111111111122
Q ss_pred HHHHHhhcccchhhhhhhccccccccceecccccc-hhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHH
Q 008231 343 LFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLS-AFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIF 421 (573)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~ 421 (573)
.........++++.. ..+.+.. ..+.+. ....++.++...+.+++.+|+.+|+ .+..+.++
T Consensus 237 ~~~~~~~~~~~~l~~-~~G~s~~------~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-----------~l~i~~~l 298 (491)
T PRK11010 237 GDAFAMSLTTTFLIR-GVGFDAG------EVGLVNKTLGLLATIVGALYGGILMQRLSLFR-----------ALMIFGIL 298 (491)
T ss_pred HHHHHHHHHHHHHHH-hcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHHHHH
Confidence 222222222222221 1122211 122333 2334555666677777776665442 13333343
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHH
Q 008231 422 SVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVS 501 (573)
Q Consensus 422 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig 501 (573)
.+++.+.+..... . ..+.+.+....++..+..++..+..+++..+..|++.+++..|+.+....+|..++
T Consensus 299 ~~l~~l~~~~l~~--------~--~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~ 368 (491)
T PRK11010 299 QGVSNAGYWLLSI--------T--DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYV 368 (491)
T ss_pred HHHHHHHHHHHHh--------c--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 3333322221110 0 11233334344554545555556667888888999999999999999999999988
Q ss_pred HHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 008231 502 SMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFF 547 (573)
Q Consensus 502 ~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 547 (573)
+.+.|++.+.. | +...|.+.+++++++.+..+..
T Consensus 369 ~~~~G~l~~~~--G----------~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 369 GPVAGWFVEAH--G----------WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHh--C----------hHHHHHHHHHHHHHHHHHHHHH
Confidence 88999887643 1 3456777777777766655544
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.88 E-value=2.3e-20 Score=222.37 Aligned_cols=345 Identities=12% Similarity=0.027 Sum_probs=203.5
Q ss_pred HHhhhcCCCc-hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH--HHHHHHHHHHhhccCCCCCCCCCcccc
Q 008231 59 YLVGDLHLSS-AKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS--VTALVVGLLTSATSIPSMRPPQCDDYR 135 (573)
Q Consensus 59 yl~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (573)
.+..+.+.+. ...+++.+++.+.+.++++++|+++||+ |||+++..... +......+..+..
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------------- 105 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------------- 105 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 3444444433 3467788899999999999999999999 99998644222 2222222222211
Q ss_pred ccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh
Q 008231 136 RKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ 215 (573)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~ 215 (573)
.+++.++++|+++|++.+++.|...+++.|++|+++ |++++++.+++.++|.++||+++|++.
T Consensus 106 -----------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~ 168 (1140)
T PRK06814 106 -----------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLAT 168 (1140)
T ss_pred -----------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 267899999999999999999999999999999988 999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccc
Q 008231 216 DNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFK 295 (573)
Q Consensus 216 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (573)
+..||++.|++.++..++++++.++ .++.+..++...... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------------------------------------~ 209 (1140)
T PRK06814 169 ISGNFVILVALLMGIAVLGWLASLF-IPKTGNAAPDLKIDR--------------------------------------N 209 (1140)
T ss_pred hccccHHHHHHHHHHHHHHHHHHhh-CCCCCCCCCCCeecc--------------------------------------c
Confidence 9999999885444444443333332 222111100000000 0
Q ss_pred hhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh-HHHHHHHHHHHHHHhhcccchhhhhhhccccccccceeccc
Q 008231 296 CLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK-LLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSG 374 (573)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (573)
....... .+ ....+.+.+.. .+..++..........+++.+.. ...+.+ ....+
T Consensus 210 ~~~~~~~-------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~g~~------~~~~g 264 (1140)
T PRK06814 210 IIRSTIT-------------LL-----KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAK-ETLGGD------ENVAT 264 (1140)
T ss_pred hHHHHHH-------------HH-----HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHcCCc------hHHHH
Confidence 0000000 00 00001111111 11111222222222222222221 111111 11234
Q ss_pred ccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcc-----cCCcccc
Q 008231 375 SLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQ-RRETSV-----QKHIQIS 448 (573)
Q Consensus 375 ~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~-~~~~~~-----~~~~~~~ 448 (573)
.+.+...++.++...+.+++.++..++. .+..+.++.+++.+.+.+.... ...... .-....+
T Consensus 265 ~~~~~~~~g~~ig~~~~g~l~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (1140)
T PRK06814 265 LFLAVFSVGVAVGSFLASKLSEGRITLL-----------YVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH 333 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeee-----------eehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc
Confidence 4556666777777777777743222111 1233333333333322221000 000000 0000124
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 449 AFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 449 ~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~ 510 (573)
.+.+++..++.|++.++..+...+++.+.+|++.+|+++|+.++...+++.+++.+.+.+.+
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 334 GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888999999998999999999999999999999999999999999999998864
No 80
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=8.8e-20 Score=198.66 Aligned_cols=405 Identities=14% Similarity=0.027 Sum_probs=234.9
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHH
Q 008231 70 KSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQL 149 (573)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (573)
+.+++.+.+.++..++.++.|+++|++ |||++++++.+++.+|.++++++ ++.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a--------------------------~~~ 142 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA--------------------------PSW 142 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh--------------------------hhH
Confidence 458999999999999999999999998 99999999999999999999998 478
Q ss_pred HHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcc-cchhHHHHHHH
Q 008231 150 AMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDN-VGRGWGYGISA 228 (573)
Q Consensus 150 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~-~g~~~~f~~~~ 228 (573)
.+++++|++.|+|.|+.....+.+++|..|++. |+...+..+...++|..++..++....+. ++||..+++..
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~ 216 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLAL 216 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHH
Confidence 899999999999999999999999999999988 99999999999999999995544444332 48998888877
Q ss_pred HHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhh
Q 008231 229 GTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAV 308 (573)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (573)
+..++..+. .+..|+.++.--+.....+..+.+....... ..+...+... .+.......
T Consensus 217 i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~---~~~~~~~~~~-----------------~~~~~~~~~ 275 (513)
T KOG0254|consen 217 IPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLS---PEDVEVELEL-----------------LKIKLLVEA 275 (513)
T ss_pred HHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCC---CcchHHHHHH-----------------HHHHHHHhh
Confidence 766665555 4444433221111112222222221111100 0000000000 000000000
Q ss_pred hccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHH
Q 008231 309 ANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFT 388 (573)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (573)
...+....|+++... ..+++.... +....+..+ ........+....+... +...+......+..+..++..
T Consensus 276 ~~~~~~~~~~~l~~~--~~~~~~~i~----~~l~~fqq~-tG~~~~~~Y~~~if~~~--g~~~~~~~~~~~~~~v~~~~t 346 (513)
T KOG0254|consen 276 EVAEGKASWGELFSP--KVRKRLIIG----LLLQLFQQL-TGINYVFYYSTTIFKSA--GLKSDTFLASIILGVVNFLGT 346 (513)
T ss_pred hcccccccHHHhcCc--chHHHHHHH----HHHHHHHHH-hCCceEEeehHHHHHhc--CCCCchHHHHHHHHHHHHHHH
Confidence 000001112111110 111111111 111111111 11111000000001111 111111122222233333333
Q ss_pred HhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhh
Q 008231 389 SLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYV 468 (573)
Q Consensus 389 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~ 468 (573)
.+...++|+.+||. .+..|...+.+++++++..........+ ......+..++..+++.........|
T Consensus 347 ~~~~~lvd~~gRr~-----------lll~s~~~m~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~f~~g~g~ 414 (513)
T KOG0254|consen 347 LVATYLVDRFGRRK-----------LLLFGAAGMSICLVILAVVGVFALYYPN-SSKGAGWLAIVFLCLFIFSFAIGWGP 414 (513)
T ss_pred HHHHHHHHHhccHH-----------HHHHhHHHHHHHHHHHHHHHHHhccCCC-cccchhHHHHHHHHHHHHHHhccccc
Confidence 33456666666553 2788888888888877765432111000 01112233333344444444455568
Q ss_pred hhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHH-HHHHH
Q 008231 469 GQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFM-VFLFF 547 (573)
Q Consensus 469 ~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~ 547 (573)
..+.+..|.+|.+.|+++.++....+++.+++-........+.. .....|..+++++.+... +.+++
T Consensus 415 v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~------------~~~~~f~~f~~~~~~~~~~fv~~~ 482 (513)
T KOG0254|consen 415 VPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL------------GIGGTFGYFGGICLLSLIIFVFFF 482 (513)
T ss_pred chhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc------------cccchHHHHHHHHHHHHHHHheEE
Confidence 88889999999999999999999999888887766665554311 012455666666666666 67888
Q ss_pred HhhcchhhhccccC
Q 008231 548 AMKHQYNVQHRVKG 561 (573)
Q Consensus 548 ~~~~~~~~~~~~~~ 561 (573)
.||+|+++.++.+.
T Consensus 483 ~pETkg~sleei~~ 496 (513)
T KOG0254|consen 483 VPETKGLTLEEINE 496 (513)
T ss_pred cccCCCCcHHHHHH
Confidence 99999988776543
No 81
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=2.8e-20 Score=195.06 Aligned_cols=397 Identities=13% Similarity=0.053 Sum_probs=235.8
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHH
Q 008231 71 SATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLA 150 (573)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (573)
-+.+++.+.+++.+++.+.|+++||+ |||..++++.++..++..++.++... +...
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-----------------------~~~e 117 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-----------------------PSFE 117 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-----------------------hhHH
Confidence 35677889999999999999999999 99999999999888888777775432 3677
Q ss_pred HHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhh-h-hhcccchhHHHHHHH
Q 008231 151 MLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLV-Y-VQDNVGRGWGYGISA 228 (573)
Q Consensus 151 ~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~-~-l~~~~g~~~~f~~~~ 228 (573)
+++++|++.|+..|......+-++.|..|++. ||..-.....+..+|..++..++. . +...-.|++.+.+..
T Consensus 118 ~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 118 MLILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPL 191 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHH
Confidence 89999999999999999999999999999999 999999999999999999976663 2 334456988888777
Q ss_pred HHHHHHHHHHHhcCccccccC-CCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhh
Q 008231 229 GTMVVAAAILLIGTPWYRFKK-PRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNA 307 (573)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (573)
+.+++..+.+.+ .||.++.- .++.+..+..+.+.... ..+... .+..+. ..+. ..
T Consensus 192 i~~~~~l~~l~~-~PESPk~Ll~~k~~~~~A~~sl~~y~-G~~~~~----~~~e~~---------------~~e~---~~ 247 (485)
T KOG0569|consen 192 IPALLQLALLPF-LPESPKYLLIKKGDEEEARKALKFYR-GKEDVE----AEIEEM---------------LREI---EE 247 (485)
T ss_pred HHHHHHHHHHhc-CCCCcchHHHHcCCHHHHHHHHHHHh-CCCcch----hHHHHH---------------HHHH---HH
Confidence 766655544333 34332211 01222222222221111 000000 000000 0000 00
Q ss_pred hhccc-cCCc-ccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccccccceec-ccccchhhHHHH
Q 008231 308 VANEN-KNNS-WIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVP-SGSLSAFLFITI 384 (573)
Q Consensus 308 ~~~~~-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 384 (573)
.++++ +..+ ++.++.. ..|+-+.. .........+........+ ....-.+. |+..+ +.+.........
T Consensus 248 ~~~~~~~~~sl~~~~~~~---~lR~~~~i----~~~v~~~qq~sGi~ai~~Y-st~i~~~a-G~~~~~a~~an~~~g~v~ 318 (485)
T KOG0569|consen 248 EELEKKKQISLRQLLKNP---TLRRPLLI----GIVVSFAQQFSGINAIFFY-STSIFKTA-GFTPEEAQYANLGIGIVN 318 (485)
T ss_pred hccccccCCcHHHHhcCc---chhHHHHH----HHHHHHHHHhcCcceeHHH-HHHHHHHc-CCCHHHHHHHHHHHHHHH
Confidence 00000 1111 1111111 11111111 0011111111111111110 00000000 11111 222333334444
Q ss_pred HHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHH
Q 008231 385 LLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEA 464 (573)
Q Consensus 385 l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~ 464 (573)
++......+++|+.+||.. ++.+..++.+..+++......... ..+...+..+.+.+++.+++.
T Consensus 319 ~~~t~~~~~lid~~gRRpL-----------ll~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~y~~i~~~~~~~~~f~ 382 (485)
T KOG0569|consen 319 LLSTLVSPFLIDRLGRRPL-----------LLISLSLMAVALLLMSIALFLSNS-----FGSWLSYLCIAAIFLFIISFA 382 (485)
T ss_pred HHHHHHHHHHHHhcCCcHH-----------HHHHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHhhh
Confidence 5555556666777676642 566666666665555544322111 001111122344444444444
Q ss_pred h-hhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHH
Q 008231 465 F-VYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMV 543 (573)
Q Consensus 465 ~-~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~ 543 (573)
. ..|..+-+.+|++|++.|..++++....+++.+++.....+.+.+..+ .++|..+.+.+++.++.
T Consensus 383 ~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-------------~~~filF~i~~~~~~i~ 449 (485)
T KOG0569|consen 383 IGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-------------PYVFILFVIPLAIFLIY 449 (485)
T ss_pred cCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------chhhHHHHHHHHHHHHH
Confidence 3 468899999999999999999999999999999999999998886542 25788889999999999
Q ss_pred HHHHHhhcchhhhccc
Q 008231 544 FLFFAMKHQYNVQHRV 559 (573)
Q Consensus 544 ~~~~~~~~~~~~~~~~ 559 (573)
.++..||+|+|+..+.
T Consensus 450 ~~~~lPETkgr~~~eI 465 (485)
T KOG0569|consen 450 LYRYLPETKGRTPYEI 465 (485)
T ss_pred HHHhCcccCCCCHHHH
Confidence 9999999998875543
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.87 E-value=1.7e-19 Score=189.28 Aligned_cols=336 Identities=9% Similarity=0.010 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchh----HHHHHHHHHHHHHHHHHH
Q 008231 43 LSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRY----LTVAIFASVTALVVGLLT 118 (573)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr----~~~~~~~~~~~~~~~~~~ 118 (573)
+....++..+.+++|.|++ ++|.|..+.|++.+.+.+...++++++|+++||+ ||| +.+.++..+. ...+.
T Consensus 14 ~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~~~ 88 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF---AVAFW 88 (382)
T ss_pred HHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH---HHHHH
Confidence 3334555667788889985 6899999999999999999999999999999998 984 3332222111 11111
Q ss_pred hhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHH
Q 008231 119 SATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYF 198 (573)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 198 (573)
... ++.+.+++.|++.|++.+...|...++..++ +++ |+++++..+.
T Consensus 89 ~~~-------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~ 135 (382)
T PRK11128 89 FGA-------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRL 135 (382)
T ss_pred Hhc-------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHH
Confidence 211 3677888899999999888888877777765 333 7888888888
Q ss_pred HHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCC
Q 008231 199 AISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPS 278 (573)
Q Consensus 199 ~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (573)
..++|..+||++++++.+.+|||.+|++.++..++..+.. +..|+. +++++..+ +
T Consensus 136 ~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~-----------------~---- 190 (382)
T PRK11128 136 WGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPTI---MPQGESRQ-----------------Q---- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCCC---CCcccccc-----------------c----
Confidence 8999999999999999999999999987765444433322 222221 11100000 0
Q ss_pred cchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHHHHHHhhcccchhhh
Q 008231 279 LLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCILFWTVYSQMTTFTVE 357 (573)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 357 (573)
..+. .. ...+..+.+..... ...++........+...+.+. .
T Consensus 191 -----------~~~~--------------------~~-----~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ 233 (382)
T PRK11128 191 -----------ESAG--------------------WP-----AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYW-Q 233 (382)
T ss_pred -----------cccc--------------------cc-----hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHH-H
Confidence 0000 00 00011111222221 111121222212222122111 1
Q ss_pred hhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 358 QATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRR 437 (573)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~ 437 (573)
+ .+.+ ....+.+..+..+..++...+.+++.+|.. ..+.+..+.++.+++++.+...+
T Consensus 234 ~-~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-----------~~~~l~~~~~~~~~~~~~~~~~~---- 291 (382)
T PRK11128 234 A-AGYS------ASTIGYLWSLGVVAEVLIFAFSNRLFRRWS-----------ARDLLLLSAICGVVRWGLMGSTT---- 291 (382)
T ss_pred H-CCCC------HhHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------HHHHHHHHHHHHHHHHHHHHhhh----
Confidence 1 1111 111233333444444555555555543332 22336667777777666554431
Q ss_pred hhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhh
Q 008231 438 ETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFL-SAISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 438 ~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~-~~~~lg~~ig~~~~~~i~~~ 511 (573)
+.+++++..++.|++++...+....++.+. +++.+++.+++.+ ....+|..+|+.+.|.+.+.
T Consensus 292 ----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 292 ----------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445566677888999998888888888887 4555788999886 55678889999999999864
No 83
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.87 E-value=1.5e-19 Score=189.09 Aligned_cols=355 Identities=12% Similarity=0.024 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC--CCchhhhHHHHHH--H---HHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 008231 44 SERICAMGISMNLVTYLVGDLH--LSSAKSATIVTNF--M---GTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGL 116 (573)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~~~~--~s~~~~~~~~~~~--~---~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 116 (573)
.+.++.+.+. +...++.++.. .++++.+.+.+.. . +...+++++.|+++||+ |||+++..+.++..++..+
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 4 VEWFDFYLYG-FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred hhHHHHHHHH-HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHH
Confidence 3444544333 45556665543 4456665555432 2 23346789999999998 9999999999999999999
Q ss_pred HHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHH
Q 008231 117 LTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRF 196 (573)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 196 (573)
++++.+.... .......++++|+++|++.+...+...+++.|++|+++ |++..++.
T Consensus 82 ~~~~~~~~~~------------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 137 (394)
T TIGR00883 82 IGLLPSYATI------------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQ 137 (394)
T ss_pred HhhCCChhhh------------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHH
Confidence 8886532200 00112357889999999999999999999999999988 99999999
Q ss_pred HHHHHhhhHHHHHHhhhhh--------cccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhc
Q 008231 197 YFAISIGSLFAVIVLVYVQ--------DNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKK 268 (573)
Q Consensus 197 ~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
+.+..+|..+++.++..+. +.++||++|.+.++..+++.+.... .++.++.+++ ++
T Consensus 138 ~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------~~ 201 (394)
T TIGR00883 138 QVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRN-LEETPVFEKA---------------QE 201 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHh-cCCChhHHHH---------------Hh
Confidence 9999999999998876653 3578999998776655444332221 1211100000 00
Q ss_pred cCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHH-HHHhHHH-HHHHHHHHHH
Q 008231 269 RSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVK-MVLKLLP-IWATCILFWT 346 (573)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-~~~~~~~~~~ 346 (573)
+ . .+ + ..++ . ...++.+ ....... .+......+.
T Consensus 202 ~-~-~~-----------------~---------------------~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T TIGR00883 202 K-H-KK-----------------K---------------------RGPI---R-ETLTKHRKPFLLGLGLVIATTTTFYL 237 (394)
T ss_pred c-c-cc-----------------c---------------------cCCH---H-HHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 0 0000 0 0011111 1211111 1111111111
Q ss_pred HhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHH
Q 008231 347 VYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAM 426 (573)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~ 426 (573)
.....+.+.. +..+.+ ....+.......+..++..++.+++.+|+.+|+.. +..+.+....+.
T Consensus 238 ~~~~~~~~~~-~~~g~~------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~ 300 (394)
T TIGR00883 238 ITTYLPTYLT-QTLGLS------ANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL----------IIFTVLAALLAV 300 (394)
T ss_pred HHHHHHHHHH-HhcCCC------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH----------HHHHHHHHHHHH
Confidence 1111211111 111111 11223334445556666677777777665544211 222222222222
Q ss_pred HHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHH-HHHHHHHHHHHHHHH
Q 008231 427 IVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLF-LSAISMGMFVSSMLV 505 (573)
Q Consensus 427 i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~-~~~~~lg~~ig~~~~ 505 (573)
....... . ..+.+......++.+++.+...+..++++.|.+|++.|+++.++. +....+|..++|.+.
T Consensus 301 ~~~~~~~----------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 301 PLLMALL----------D-SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHh----------c-CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 2211110 0 113444455567777777778888899999999999999999984 566778888999999
Q ss_pred HHHhhhh
Q 008231 506 SIVDKIT 512 (573)
Q Consensus 506 ~~i~~~~ 512 (573)
|.+.+..
T Consensus 370 g~l~~~~ 376 (394)
T TIGR00883 370 AALVAMT 376 (394)
T ss_pred HHHHHHc
Confidence 9987653
No 84
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=8.4e-20 Score=189.47 Aligned_cols=327 Identities=13% Similarity=0.080 Sum_probs=208.1
Q ss_pred HHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 008231 54 MNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDD 133 (573)
Q Consensus 54 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (573)
..+.+.+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++..+..++.+.+ .+
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~------------- 84 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA------------- 84 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh-------------
Confidence 3344567779999999999999999999999999999999998 99999999988887777666 33
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhh
Q 008231 134 YRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVY 213 (573)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~ 213 (573)
.+.+.+++.|++.|++.+...+....++.|.+| ++ |+++.++++.+.++|..+++.+++.
T Consensus 85 -------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~ 144 (355)
T TIGR00896 85 -------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVP 144 (355)
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 256688899999999999888888888888876 45 9999999999999999999999998
Q ss_pred hhccc--chhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCC
Q 008231 214 VQDNV--GRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHT 291 (573)
Q Consensus 214 l~~~~--g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (573)
+.+.. +||+.|.+.++..++....+ . ++.++++++.++ .
T Consensus 145 l~~~~~~~w~~~f~~~~~~~~~~~~~~-~--~~~~~~~~~~~~--------------------~---------------- 185 (355)
T TIGR00896 145 LAQHSGGHWQQALAWWALPALLALLAW-I--PQVRRRVAANQT--------------------T---------------- 185 (355)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHH-h--hhhccccCCCCC--------------------C----------------
Confidence 87765 38988876655433332221 1 211111000000 0
Q ss_pred CccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhcccccccccee
Q 008231 292 EKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTV 371 (573)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (573)
. ....++ ..++++.....+...+....++....+.+.++.. .+.+ ..
T Consensus 186 ~--------------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~g~~------~~ 232 (355)
T TIGR00896 186 T--------------------RLTPVR-----IWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS--HGAS------AA 232 (355)
T ss_pred C--------------------CCCCch-----hhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCC------HH
Confidence 0 000000 0011111111111111122222222222222211 1111 11
Q ss_pred cccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Q 008231 372 PSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFW 451 (573)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 451 (573)
..+.+.+...++.++..++.+++.||+.+|+ +.+..+.++.+++.+.+.... . ...+
T Consensus 233 ~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----------~~~~~~~~~~~~~~~~~~~~~----------~---~~~~ 289 (355)
T TIGR00896 233 TAGSLLALMQLAQAASALLIPALARRVKDQR----------GIVAVLAVLQLVGLCGLLFAP----------M---HGLW 289 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhccch----------HHHHHHHHHHHHHHHHHHHhh----------h---hHHH
Confidence 2334555566667777777777765553221 124556666666665555431 0 1111
Q ss_pred HHHHHHHHHHHHHhhhhhhhheeeccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008231 452 LVPQYFLVGAGEAFVYVGQLEFFIREG-PERMKSMSTGLFLSAISMGMFVSSMLVSIVDKIT 512 (573)
Q Consensus 452 lv~~~~l~g~~~~~~~~~~~~~~~~~~-p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~ 512 (573)
...++.|++.+...|...+.+.+.. +++.++...++.+...++++.++|.+.|++.+..
T Consensus 290 --~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 290 --AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred --HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1346678888888887777665444 4677899999999999999999999999998754
No 85
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.85 E-value=1.5e-18 Score=183.47 Aligned_cols=171 Identities=14% Similarity=0.090 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
++.++...+...+.+ ++...+.+.+++++|+|..+.+++.+.+.+++.++.++.|++.||+ |||+++.++..+.+++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 344444444444444 4555555677999999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHH
Q 008231 115 GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFN 194 (573)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 194 (573)
.++..+... .+++.++++|++.|+|.+...+...+++.+..|+++ |++..+
T Consensus 83 ~l~~~~~~~-----------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~ 133 (410)
T TIGR00885 83 FLFWPAAEI-----------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLN 133 (410)
T ss_pred HHHHHHHhh-----------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHH
Confidence 886543211 267789999999999999999999999999988887 899999
Q ss_pred HHHHHHHhhhHHHHHHhhhhhcc--------------------------cchhHHHHHHHHHHHHHHH
Q 008231 195 RFYFAISIGSLFAVIVLVYVQDN--------------------------VGRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 195 ~~~~~~~ig~~~~~~~~~~l~~~--------------------------~g~~~~f~~~~~~~~~~~~ 236 (573)
+.+...++|..+||.+++.+... .+||++|.+.++..++..+
T Consensus 134 ~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~ 201 (410)
T TIGR00885 134 LAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVAL 201 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998877422 3699999877765554433
No 86
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.84 E-value=9e-18 Score=177.40 Aligned_cols=163 Identities=13% Similarity=0.051 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhcc----chhH-HHHHHHHHHHHHHHH
Q 008231 42 ELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKL----GRYL-TVAIFASVTALVVGL 116 (573)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~----Grr~-~~~~~~~~~~~~~~~ 116 (573)
-+.+.+.+.....-+|.|+.+ .|+|.+|.|++..+... .+..+++|+++||+. |||| .+.++..+.+++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH
Confidence 344445555566678888885 59999999999766654 699999999999972 5655 677878888877777
Q ss_pred HHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHH
Q 008231 117 LTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRF 196 (573)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 196 (573)
+++... ..+.+.+++..++.+.+.+...+...+++.|++|+++ |+++.++.
T Consensus 85 l~~~~~-----------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~ 135 (402)
T PRK11902 85 MAFCPP-----------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVK 135 (402)
T ss_pred HHhcCc-----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHH
Confidence 776421 0246667777777788888888999999999999988 99999999
Q ss_pred HHHHHhhhHHHHHHhhhhhcc-cchhHHHHHHHHHHHHHHH
Q 008231 197 YFAISIGSLFAVIVLVYVQDN-VGRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 197 ~~~~~ig~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~~ 236 (573)
..+.++|..+++.+++++.+. .|||.+|++.++..++..+
T Consensus 136 ~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 136 VLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998875 5999999987776655444
No 87
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.83 E-value=9.8e-19 Score=181.48 Aligned_cols=161 Identities=12% Similarity=0.081 Sum_probs=122.6
Q ss_pred HHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc----cchhHHH-HHHHHHHHHHHHHHHhhccCCCC
Q 008231 52 ISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK----LGRYLTV-AIFASVTALVVGLLTSATSIPSM 126 (573)
Q Consensus 52 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~~ 126 (573)
+...+.+.+.+++|+|.++.++.... .+...+ .+++|+++||+ .||||.+ +.+..+.++....+++..+.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~--- 80 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS--- 80 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc---
Confidence 33444455566889999999999655 444444 89999999996 3898874 56666677766666654311
Q ss_pred CCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHH
Q 008231 127 RPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLF 206 (573)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 206 (573)
.+.+.+....++.+++.+...+...+++.|++|+++ |+++.++...+.++|.++
T Consensus 81 --------------------~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~ 134 (356)
T TIGR00901 81 --------------------TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLL 134 (356)
T ss_pred --------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHH
Confidence 245566666677788888888999999999999888 999999999999999999
Q ss_pred HHHHhhhhhcccc--------hhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 207 AVIVLVYVQDNVG--------RGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 207 ~~~~~~~l~~~~g--------~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
++.+++++.+..| ||.+|++.++..+++.+..++..+
T Consensus 135 ~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~ 179 (356)
T TIGR00901 135 SGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAK 179 (356)
T ss_pred HHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999988888 999999888766665544443333
No 88
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.83 E-value=3.2e-20 Score=193.84 Aligned_cols=362 Identities=34% Similarity=0.518 Sum_probs=230.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCC
Q 008231 101 LTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDT 180 (573)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~ 180 (573)
|+++++.++..+|.+++.+++..+.. +.+.+...++++.+++++|.|++.|+..++++|++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~-----------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~ 64 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL-----------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDE 64 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC-----------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSST
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh-----------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcc
Confidence 78999999999999998776543321 1223456899999999999999999999999999998
Q ss_pred CCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCcccccc-CCCCCchhH-H
Q 008231 181 SDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFK-KPRGSPLTV-I 258 (573)
Q Consensus 181 ~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 258 (573)
++++ +|.++++++|++.|+|+.+++.+.+++.+++||.+.|.++.+.++++.+.++..++.++.. ++.+.+... .
T Consensus 65 ~~~~---~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~ 141 (372)
T PF00854_consen 65 DDDS---RRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFI 141 (372)
T ss_dssp TTTT---HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--S
T ss_pred cchh---hhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhH
Confidence 7322 2999999999999999999999999999999999999999999999999888888888776 555655555 2
Q ss_pred HHHHHHHHhccCCCCCCCCCcchhccc--ccCCCCCccchhhhhhhhhhhhhhccccCCcccc-cchhhHHHHHHHHhHH
Q 008231 259 WRVLLLAWKKRSHPYPDHPSLLNEYQN--AKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIV-STVTEVEEVKMVLKLL 335 (573)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 335 (573)
........+++....|....+...... ..................... ...|.. +...+++..+.+...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~k~~~~~~ 214 (372)
T PF00854_consen 142 KLVLVAAFKKRKLAVPKGSSWLDWALFQYSERSIFGIIVFIRAAVIFFPE-------IFFWALFCQVQRVEELKALIRFL 214 (372)
T ss_dssp HHHHHHHHHHHCCCH-HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC-------HHHHTTTSSTTTHHHCCHHHCHH
T ss_pred HHHHHHHHHHhhcccccchHHHHHhhhhhhhhhhhhhhhhccchhhhhhh-------hhhcccCCccceeeeeeeeeecc
Confidence 333333344444433322222221111 111111111111111110000 000100 1223334445556666
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhcccccccc-ceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHH
Q 008231 336 PIWATCILFWTVYSQMTTFTVEQATFMNRKIGS-FTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQR 414 (573)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 414 (573)
+.+.+.+.+.+...+.+.+...+...++...++ +.+|+++++.++.+..+++.|+.++++.|+.|+.. ..+.+.+
T Consensus 215 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~----~~~~~~k 290 (372)
T PF00854_consen 215 PIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGI----QPSPPQK 290 (372)
T ss_dssp HCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHH
T ss_pred ccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcc----cchhhhh
Confidence 666677777787777777777777777766776 88999999999999999999999999999887322 3678889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHH
Q 008231 415 VGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAI 494 (573)
Q Consensus 415 ~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~ 494 (573)
+..|++++.++++.....+..+..... .....+.+|.++.++++.+++.+..+...+...|.+|++..+...|++....
T Consensus 291 ~~~G~~~~~~~~~~~~~v~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 291 FGIGMVFAILAMFVAAIVEIRRLCYAQ-PCGKVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALS 369 (372)
T ss_dssp HHHH-HHHHHHHHTTTHHHH---HH-----TT--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhhccc-ccCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHh
Confidence 999999999999888776542111111 2223344777799999999999999999997777777777777777666543
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.82 E-value=3.4e-17 Score=176.11 Aligned_cols=149 Identities=13% Similarity=0.048 Sum_probs=122.2
Q ss_pred HHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 008231 54 MNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDD 133 (573)
Q Consensus 54 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (573)
.....++..++|-+ .+..|+.+...+...+..++.|+|+|.+ |||+.++.+.++..+|.++++.+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 34456888999975 5677899999999999999999999998 999999999999999999999874
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhh
Q 008231 134 YRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVY 213 (573)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~ 213 (573)
+...++++..+.|+|.|... .....++|..|.+. |..+..+.....-+....+|.++..
T Consensus 130 --------------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~ 188 (599)
T PF06609_consen 130 --------------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQL 188 (599)
T ss_pred --------------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHH
Confidence 67789999999999977765 44556899999887 8888877766666666677777777
Q ss_pred hhcccchhHHHHHHHHHHHHHHHH
Q 008231 214 VQDNVGRGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 214 l~~~~g~~~~f~~~~~~~~~~~~~ 237 (573)
+....+|||.|++..+...++++.
T Consensus 189 ~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 189 FAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred hccCCCcchHHHHHHHHHHHHHHH
Confidence 766678999999888766665543
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.80 E-value=1.2e-17 Score=173.04 Aligned_cols=170 Identities=12% Similarity=-0.080 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchh-hhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAK-SATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..++|+-.|+.. +-...+++.+|+.+++|++..| .|.+.+++..++.++.+++|+++||+ |.|+++.++++.+.+.
T Consensus 29 ~~~lC~fGF~~e--~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~ 105 (511)
T TIGR00806 29 VLYLCFYGFMAQ--FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCV 105 (511)
T ss_pred HHHHHHHHHHHH--hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 333444444333 3345677888999999999999 99999999999999999999999998 9999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.++.++++ ++..+.+.|++.|++.|... ....++..++|+++ |+++.
T Consensus 106 t~L~~fa~--------------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~rat 152 (511)
T TIGR00806 106 WLLLLLGT--------------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAA 152 (511)
T ss_pred HHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHH
Confidence 99999873 67799999999999999999 99999999999988 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHH---HHHHHHHHHHHHHHHhc
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGY---GISAGTMVVAAAILLIG 241 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f---~~~~~~~~~~~~~~~~~ 241 (573)
++.+.+..+|.++++++++++ ..+||++-+ +++.....+++++.++.
T Consensus 153 si~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 153 AYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999994 568998743 45555555555544443
No 91
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.80 E-value=9.6e-17 Score=170.26 Aligned_cols=436 Identities=13% Similarity=0.060 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhh----ccchhHHHHHH-HH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADA----KLGRYLTVAIF-AS 108 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~~~~~~-~~ 108 (573)
.++.++...+.-++++-...+++++|+ +++|.+..+.+++..+..+...+.+|+.|+++|| + ||||.++++ ..
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 456666677777777777777888876 5899999999999999999999999999999995 7 999998875 55
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
..+++..+++++.++..... ++ .+.. ..........++..+..++.....+...++++|.+|+++++
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~---~~---~~~~---~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~---- 149 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFG---DN---LDKK---TKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR---- 149 (477)
T ss_pred HHHHHHHHHHhCchhhhhcc---cc---cccc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----
Confidence 66666677766543211000 00 0000 00011223344444555677777778889999999988621
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhh--hccc-------------chhHHHHHHHHHHHHHHHHHHhcCccccccCCCCC
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYV--QDNV-------------GRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGS 253 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l--~~~~-------------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (573)
++.+.++.+...++|+++|+.++++. .+.. +.++.|++.++..++..++..+..+|.+..++++.
T Consensus 150 ~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~ 229 (477)
T TIGR01301 150 TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc
Confidence 46899999999999999999998865 2111 56788998888777776665555555332111100
Q ss_pred chhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHH-HHHH
Q 008231 254 PLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEV-KMVL 332 (573)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 332 (573)
... +. +..++.+.... .+.. + +..++. +.+.
T Consensus 230 ~~~-------------------------~~--~~~~~~~~~~~---~~~i-------------~-----~~~~~mP~~m~ 261 (477)
T TIGR01301 230 INS-------------------------EA--APPSKHGEEAF---FGEL-------------F-----GAFKYLPRPVW 261 (477)
T ss_pred hhh-------------------------hc--ccccccchhhh---HHHH-------------H-----HHHHHCCHHHH
Confidence 000 00 00000000000 0000 0 000000 1122
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhhhcc-ccc---cccceec-ccccchhhHHHHHHHHHhhhhhhhhhhcccccccC
Q 008231 333 KLLPIWATCILFWTVYSQMTTFTVEQATFM-NRK---IGSFTVP-SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQ 407 (573)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~ 407 (573)
+++.+-++.-.-|..+..+.+.+.-+..+- +.. .+..++. ..+...++.+...+ .+.+..++.||...
T Consensus 262 ~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i----~s~~l~~l~~~~g~--- 334 (477)
T TIGR01301 262 ILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGI----TSIGMEKLCRGWGA--- 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcc---
Confidence 222222222222233333333222211110 100 0000000 01112222222222 33333333444321
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--h-ccc---CCcccc-hhHHHHHHHHHHHHHHhhhhhhhheeecccCc
Q 008231 408 GMTSLQRVGTGLIFSVIAMIVSAVIEQQRRE--T-SVQ---KHIQIS-AFWLVPQYFLVGAGEAFVYVGQLEFFIREGPE 480 (573)
Q Consensus 408 ~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~--~-~~~---~~~~~~-~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~ 480 (573)
.......+.++.+++++...+......+ + +++ -..... .+..+..+.+.|+..+..+...++++++..|+
T Consensus 335 ---~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 335 ---GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred ---chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 1122467777777787777654321000 0 000 000011 25566778889999999999999999999994
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008231 481 --RMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQ 552 (573)
Q Consensus 481 --~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 552 (573)
+..|..+|+.|++..+...+.....|.+.+..+ ++....+.+-++..+++++..++..|+.+
T Consensus 412 ~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g----------~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 412 LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG----------GGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC----------CCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 556999999999999999999988887554322 12234566667777788887777777643
No 92
>PRK09669 putative symporter YagG; Provisional
Probab=99.79 E-value=8.1e-17 Score=172.40 Aligned_cols=357 Identities=12% Similarity=0.017 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhh----ccchhH-HHHHHHHHHHH
Q 008231 38 ILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADA----KLGRYL-TVAIFASVTAL 112 (573)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~-~~~~~~~~~~~ 112 (573)
-.++.+..++.+..+..+++.|+++.+|+|..++|.+..+..+.-.+..|+.|+++|| + |||| .++++....++
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i 92 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGV 92 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHH
Confidence 3445566666666778889999999999999999999999999999999999999999 5 7754 45566666666
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..++......+ .......+++...+.+++......+..++.+|+.++.++ |.+.
T Consensus 93 ~~~l~f~~p~~~--------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e-----R~~l 147 (444)
T PRK09669 93 VCLLTFYTPDFG--------------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE-----RHSL 147 (444)
T ss_pred HHHHHHhCCCCC--------------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH-----HHHH
Confidence 665544332111 012344455555555666666777777899998754321 8888
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhc-------ccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQD-------NVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLA 265 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (573)
.++.....++|..+++.+...+.. ..||+..+.+.++..++..+..++..++... +++.++
T Consensus 148 ~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~-~~~~~~----------- 215 (444)
T PRK09669 148 QSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYT-PEVDNS----------- 215 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecC-CCCcCC-----------
Confidence 888777788887777665443332 2467766666655544443333333222111 000000
Q ss_pred HhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHH
Q 008231 266 WKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFW 345 (573)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 345 (573)
.+..+.. ....+.|.....+...+......
T Consensus 216 ----------------------------~~~~~~~----------------------~~~~~n~~~~~l~~~~~~~~~~~ 245 (444)
T PRK09669 216 ----------------------------SSVWKDL----------------------KLLLGNSQWRIMFIFNVVLLTAV 245 (444)
T ss_pred ----------------------------CCHHHHH----------------------HHHhCCchHHHHHHHHHHHHHHH
Confidence 0000000 00001111111111111111111
Q ss_pred HHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHH
Q 008231 346 TVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIA 425 (573)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~ 425 (573)
........++.... +... . ....+.....+..++..++.+++.+|+.+|. .+..+.++..++
T Consensus 246 ~~~~~~~~y~~~~~--~~~~----~-~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~-----------~~~~~~~~~~~~ 307 (444)
T PRK09669 246 VTRGGATLYYVNYV--LLRP----D-LATLFLVTGMIAGLFGALLSERLLGKFDRVR-----------AFKWTIVAFVIL 307 (444)
T ss_pred HHHhhhhheeeeee--cCCH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----------HHHHHHHHHHHH
Confidence 11111111211111 1100 1 0112222333444555666667765544332 234444443333
Q ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccC-------chhHHHHHHHHHHHHHHHH
Q 008231 426 MIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGP-------ERMKSMSTGLFLSAISMGM 498 (573)
Q Consensus 426 ~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p-------~~~rg~~~gi~~~~~~lg~ 498 (573)
.+..... . ..+.+.+.+..++.+++.+...+..++++.|..+ ++..|...|++++...+|.
T Consensus 308 ~~~~~~~----------~--~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~ 375 (444)
T PRK09669 308 SALIFFI----------P--PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGL 375 (444)
T ss_pred HHHHHHh----------C--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHH
Confidence 3222221 1 1134445556678899999999999999988875 3556788999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 008231 499 FVSSMLVSIVDKIT 512 (573)
Q Consensus 499 ~ig~~~~~~i~~~~ 512 (573)
.+++.+.+.+.+..
T Consensus 376 alg~~i~g~ll~~~ 389 (444)
T PRK09669 376 AIGGAVVGWILAWV 389 (444)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999988754
No 93
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.78 E-value=2.2e-16 Score=167.81 Aligned_cols=153 Identities=18% Similarity=0.160 Sum_probs=130.4
Q ss_pred HhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccccccc
Q 008231 60 LVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHH 139 (573)
Q Consensus 60 l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (573)
+.+++++...+.+.+.++|.+++.++.+++|.|.||+ .-.+.+....+++.+..++....
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~------------------- 131 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV------------------- 131 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 3478889999999999999999999999999999998 87777777766666655555443
Q ss_pred ccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh----
Q 008231 140 QCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ---- 215 (573)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~---- 215 (573)
++++.+++.|++.|+.++...|....+++.++.+++ |+..+++++...++|.++|.++...+.
T Consensus 132 -------~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 132 -------HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred -------hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 478899999999999999999999999999999999 999999999999999999999987752
Q ss_pred --cccchhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 216 --DNVGRGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 216 --~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
...||||.|.+.+++.++..++.++..|..
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 356899999999988777666666666643
No 94
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=3.2e-16 Score=167.98 Aligned_cols=358 Identities=8% Similarity=0.017 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHHH-HHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK---LGRYLTV-AIFASVTA 111 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~-~~~~~~~~ 111 (573)
+.-..+.+..+..+....++++.|+++.+|++..++|.+.+...+...+..++.|+++||. +||||.+ .++.+...
T Consensus 11 ~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~ 90 (448)
T PRK09848 11 VGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLM 90 (448)
T ss_pred HhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHH
Confidence 3334466667777777778899999999999999999999999999999999999999994 2667654 55555444
Q ss_pred HHHHHHHhhc-cCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 112 LVVGLLTSAT-SIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 112 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+...++.... ..+ .......+++...+.+++.+...++..++..++.++.++ |.
T Consensus 91 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~ 145 (448)
T PRK09848 91 IFSVLVFWVPTDWS--------------------HSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RA 145 (448)
T ss_pred HHHHHHHhCcCCCC--------------------cchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HH
Confidence 4443332111 000 001223334445567788888887777877777665331 66
Q ss_pred HHHHHHHHH-----HHhhhHHHHHHhhhhhcccchhHHHH--HHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHH
Q 008231 191 FFFNRFYFA-----ISIGSLFAVIVLVYVQDNVGRGWGYG--ISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLL 263 (573)
Q Consensus 191 ~~~~~~~~~-----~~ig~~~~~~~~~~l~~~~g~~~~f~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (573)
+..++-..+ .+++..++|++.+.........+..+ +.++..++..++.....+|....+.++.
T Consensus 146 ~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~---------- 215 (448)
T PRK09848 146 RLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQP---------- 215 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccCC----------
Confidence 665554433 34556666666654322111111111 1111111111111111221110000000
Q ss_pred HHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHH-HHHHHHH
Q 008231 264 LAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLL-PIWATCI 342 (573)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~ 342 (573)
+..+. .....+.|...... ..++...
T Consensus 216 -------------------------------~~~~~----------------------~~~l~~n~~f~~~~~~~~~~~~ 242 (448)
T PRK09848 216 -------------------------------SLKIS----------------------LQTLKRNRPLFMLCIGALCVLI 242 (448)
T ss_pred -------------------------------CHHHH----------------------HHHHhCCchHHHHHHHHHHHHH
Confidence 00000 00011111222111 1111111
Q ss_pred HHHHHhhcccchhhhhhhccccccccceecccccchh-hHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHH
Q 008231 343 LFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAF-LFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIF 421 (573)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~ 421 (573)
.+.. ......++.....+.+ .. .+.+... ..+..++..++.+++.+|+.+| +.+..|.++
T Consensus 243 ~~~~-~~~~~~~~~~~~~g~~------~~-~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----------~~~~~g~~~ 303 (448)
T PRK09848 243 STFA-VSASSLFYVRYVLNDT------GL-FTVLVLVQNLVGTVASAPLVPGMVARIGKK-----------NTFLIGALL 303 (448)
T ss_pred HHHH-HhhhheeeEeeecCCh------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHH
Confidence 1111 1111122221111111 10 1111122 2344455666666665444332 336667777
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCch-------hHHHHHHHHHHHH
Q 008231 422 SVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPER-------MKSMSTGLFLSAI 494 (573)
Q Consensus 422 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~-------~rg~~~gi~~~~~ 494 (573)
..++++.+.+.. ..+.+.+....++.++|++...+..++...+..|.+ .+|.+.|++++.+
T Consensus 304 ~~i~~~~~~~~~------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~ 371 (448)
T PRK09848 304 GTCGYLLFFWVS------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTR 371 (448)
T ss_pred HHHHHHHHHHcC------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHH
Confidence 777766554421 123444555677889999999999999988888753 4699999999999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 008231 495 SMGMFVSSMLVSIVDKIT 512 (573)
Q Consensus 495 ~lg~~ig~~~~~~i~~~~ 512 (573)
.+|..+++.+.+.+.+..
T Consensus 372 klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 372 KCGQAIGGSIPAFILGLS 389 (448)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999887654
No 95
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.77 E-value=3.2e-16 Score=169.13 Aligned_cols=364 Identities=12% Similarity=0.024 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhh----hccch-hHHHHHHHHHHHH
Q 008231 38 ILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLAD----AKLGR-YLTVAIFASVTAL 112 (573)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr-r~~~~~~~~~~~~ 112 (573)
-.++.+..++.+..+.++++.|+++.+|++...+|.+..+.-+.-.+..|+.|+++| |+ || |+-++++....++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i 89 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSV 89 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHH
Confidence 445566667777778889999999999999999999999999999999999999999 66 88 5556667777777
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCC-CCCchHHHhHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFD-TSDPKEEKAMIF 191 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~ 191 (573)
+..++......+ .......+++.-.+.+++......+..++..|+.+ +++ |.+
T Consensus 90 ~~~llf~~p~~~--------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~~ 143 (473)
T PRK10429 90 VLFLLFSAHLFE--------------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------REQ 143 (473)
T ss_pred HHHHHHcCCCCC--------------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HHH
Confidence 765554321111 00123334444556677788888888899999885 444 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhc-------ccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHH
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQD-------NVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLL 264 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (573)
..++.+...++|+.+.+.+...+.+ ..||+....+.++..++..+..++..+|.... ++.++
T Consensus 144 l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~-~~~~~---------- 212 (473)
T PRK10429 144 LVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSS-DNQVS---------- 212 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCc-ccccc----------
Confidence 8888777778876666555443322 12455555544444444333333323321100 00000
Q ss_pred HHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHH
Q 008231 265 AWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILF 344 (573)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 344 (573)
.++++.+..+.. ....+.|.+...+...+.....
T Consensus 213 ------------------------~~~~~~~~~~~~----------------------~~~~~n~~~~~ll~~~~~~~~~ 246 (473)
T PRK10429 213 ------------------------AEGSHLTLKDIV----------------------ALIYKNDQLSCLLGMALAYNIA 246 (473)
T ss_pred ------------------------ccccCCCHHHHH----------------------HHHhcCHHHHHHHHHHHHHHHH
Confidence 000000000000 0011112222222111111122
Q ss_pred HHHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHH
Q 008231 345 WTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVI 424 (573)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i 424 (573)
.........++.....+ +. . ..+.+..+..+..++..++.+++.+|+.+|. .+..+.++..+
T Consensus 247 ~~~~~~~~~y~~~y~~~-~~-----~-~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~-----------~~~~~~~~~~~ 308 (473)
T PRK10429 247 SNIINGFAIYYFTYVIG-DA-----D-LFPYYLSYAGAANLVTLILFPRLVKSLSRRI-----------LWAGASIFPVL 308 (473)
T ss_pred HHHHhhheeeEEEEECC-CH-----H-HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----------HHHHHHHHHHH
Confidence 22222222222211101 00 0 1122333444556666777777765554442 24445555444
Q ss_pred HHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccC-------chhHHHHHHHHHHHHHHH
Q 008231 425 AMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGP-------ERMKSMSTGLFLSAISMG 497 (573)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p-------~~~rg~~~gi~~~~~~lg 497 (573)
+.+...... .......+.+++..++.+++.+...+..+++..|..+ +|..|...|...+...+|
T Consensus 309 ~~~~~~~~~---------~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~ 379 (473)
T PRK10429 309 SCGVLLLMG---------LAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGG 379 (473)
T ss_pred HHHHHHHHh---------ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHH
Confidence 444332210 0011234445556677888888888888888988866 566788999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 008231 498 MFVSSMLVSIVDKIT 512 (573)
Q Consensus 498 ~~ig~~~~~~i~~~~ 512 (573)
..+++.+.|.+.+..
T Consensus 380 ~al~~~i~g~~l~~~ 394 (473)
T PRK10429 380 SAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999988654
No 96
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=2.1e-16 Score=172.75 Aligned_cols=141 Identities=15% Similarity=0.017 Sum_probs=126.8
Q ss_pred hhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccc
Q 008231 61 VGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQ 140 (573)
Q Consensus 61 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (573)
.+..+.+.....+..+++.++..++++++|+++||+ |||+++++++++.+++.++.+++
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a-------------------- 168 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA-------------------- 168 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh--------------------
Confidence 356677888889999999999999999999999997 99999999999999999999987
Q ss_pred cccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 141 CIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
+++..+++.|++.|++.++...+...+++|+++++. |+.+..+ ......++.+++.+++++.. +|
T Consensus 169 ------~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~W 233 (521)
T KOG0255|consen 169 ------PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DW 233 (521)
T ss_pred ------CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hH
Confidence 478899999999999999999999999999999999 9999999 77888888899999999887 89
Q ss_pred hHHHHHHHHHHHHHHHH
Q 008231 221 GWGYGISAGTMVVAAAI 237 (573)
Q Consensus 221 ~~~f~~~~~~~~~~~~~ 237 (573)
|+.+++..+..++.++.
T Consensus 234 r~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 234 RWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999877766555444
No 97
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.77 E-value=6.4e-16 Score=152.71 Aligned_cols=351 Identities=14% Similarity=0.139 Sum_probs=245.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
+..+..+.++.+--+-..-++- .+..-+.+++|+|.+.+|.+.++-.+...+..++..+++.|+ |.++.+..++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvg-PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVG-PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhh-hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHH
Confidence 3344444445554455554443 345677889999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
+|..+=... +...++.+-.+.|.|.+..+...++++-+.||++ .+.
T Consensus 89 ~G~~iR~~~---------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~ 134 (395)
T COG2807 89 AGILIRSLG---------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGL 134 (395)
T ss_pred HHHHHHhcc---------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhh
Confidence 998887763 4568899999999999999999999999999976 588
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhccc-chhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccC
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNV-GRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRS 270 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (573)
.+++|..+.++|+.+++.+...+.+.. |||....+-+...+++++.++....+.+....+...
T Consensus 135 mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~---------------- 198 (395)
T COG2807 135 MTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIATKL---------------- 198 (395)
T ss_pred HHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccccccccccc----------------
Confidence 899999999999999999999998877 799988877777777777665432211100000000
Q ss_pred CCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhc
Q 008231 271 HPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQ 350 (573)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 350 (573)
. +..+-|+ +...+...+-+-..+..+|..+.+
T Consensus 199 --------------------~--------------------~~~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~W 230 (395)
T COG2807 199 --------------------V--------------------SVRKVWR--------SPLAWQVTLFMGLQSLLYYIVIGW 230 (395)
T ss_pred --------------------c--------------------ccccccc--------CchhHHHHHHHHhhHHHHHHHHHH
Confidence 0 0011221 111222223345667788888888
Q ss_pred ccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHH
Q 008231 351 MTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSA 430 (573)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~ 430 (573)
++.++.++. ++. ...+.+.++..+..+....+.-.+..|..++ .........++.++++.+.
T Consensus 231 LP~ili~~G--~sa------~~aG~llsl~~l~~~~~~ll~P~la~R~~n~----------r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 231 LPAILIDRG--LSA------AEAGSLLSLMQLAQLPTALLIPLLARRSKNQ----------RPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred HHHHHHHcC--CCH------HHhhhHHHHHHHHHHHHHHHHHHHHHHhccc----------chHHHHHHHHHHHHHHHHH
Confidence 888776653 221 1345555555555555555555554332111 1225556666667777666
Q ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008231 431 VIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGP-ERMKSMSTGLFLSAISMGMFVSSMLVSIVD 509 (573)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~ 509 (573)
+.. .+..++| .++.|+|.+..+|...+++....+ ++..+.-.|+.....++=..+||.+.|++.
T Consensus 293 ~~P-----------~~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lh 357 (395)
T COG2807 293 LAP-----------GQLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLH 357 (395)
T ss_pred Hhh-----------hhHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHH
Confidence 542 1223333 377888888888888888877764 566777788888888888889999999999
Q ss_pred hhhccCc
Q 008231 510 KITNKHW 516 (573)
Q Consensus 510 ~~~~~~w 516 (573)
|.++ +|
T Consensus 358 Da~g-sw 363 (395)
T COG2807 358 DATG-SW 363 (395)
T ss_pred HhcC-Ch
Confidence 8764 44
No 98
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=1.1e-16 Score=158.31 Aligned_cols=342 Identities=15% Similarity=0.135 Sum_probs=203.9
Q ss_pred hcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccc
Q 008231 63 DLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCI 142 (573)
Q Consensus 63 ~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (573)
..+.+..-.|.+-+.|++..++.++.+|.++||+ |||.+++++.+..++...+.+.+
T Consensus 62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S---------------------- 118 (451)
T KOG2615|consen 62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS---------------------- 118 (451)
T ss_pred cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 3445667789999999999999999999999999 99999999999999988888886
Q ss_pred cchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhc---ccc
Q 008231 143 EANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQD---NVG 219 (573)
Q Consensus 143 ~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~---~~g 219 (573)
.++..+.++|++.|+.-|-. ..+.++++|.+++++ |+.+++....+..+|.++||.++|++.+ ..|
T Consensus 119 ----~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g 187 (451)
T KOG2615|consen 119 ----RNFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG 187 (451)
T ss_pred ----HHHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHhhHhhhc
Confidence 36766777799999999887 467799999999988 9999999999999999999999999987 222
Q ss_pred hhHHHHHHHHH-HHHH---HHHHHhcCccccccCCCC-CchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCcc
Q 008231 220 RGWGYGISAGT-MVVA---AAILLIGTPWYRFKKPRG-SPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKF 294 (573)
Q Consensus 220 ~~~~f~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (573)
..+|..+... .+.+ ...+.+..||.-+.+++. ++. .+.+..++. ......
T Consensus 188 -~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~-----------------------~~~~~~~~~-~~~~~~ 242 (451)
T KOG2615|consen 188 -SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHS-----------------------TLQEAADDR-LALLKF 242 (451)
T ss_pred -cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhccccc-----------------------chhhhhhhh-hhhcch
Confidence 2233332221 1111 222333344432211111 000 000000000 000001
Q ss_pred chhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhcc-ccccccceecc
Q 008231 295 KCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFM-NRKIGSFTVPS 373 (573)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 373 (573)
++..+.... ...|.+ +.....+.+ ...+..|......+-.....+ ...++-...+.
T Consensus 243 ~~~~~v~~l---------rn~p~~----~~i~~~~i~----------~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~ 299 (451)
T KOG2615|consen 243 ARIFKVAAL---------RNPPLL----DFISVLRIF----------GLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQ 299 (451)
T ss_pred hhhhhhhhh---------cCcccc----chHHHHHHH----------HHHHHHHHHHHHHHHhhHHHhhcCccCCChhhh
Confidence 111111110 001110 000111111 111111111111000000001 01111113345
Q ss_pred cccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Q 008231 374 GSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLV 453 (573)
Q Consensus 374 ~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv 453 (573)
+.+.+...+..++.+... .|..+|..+ .....+...++++...++++.... ....+.
T Consensus 300 G~vl~~tGl~m~~~ql~~----~~~l~~~~~-----~~~a~l~~~l~~~vP~~llls~~~--------------~~~~l~ 356 (451)
T KOG2615|consen 300 GKVLSTTGLLMLVIQLAL----VPILPRYKG-----NIKAVLLFSLLLIVPAFLLLSLAR--------------TPVVLY 356 (451)
T ss_pred eeeeehhhHHHHHHHHhc----ccccccccc-----chhhHHHHHHHHHHHHHHHHhccc--------------cchhhh
Confidence 555555555555544333 222333221 133345556666666665555431 223456
Q ss_pred HHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008231 454 PQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVD 509 (573)
Q Consensus 454 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~ 509 (573)
....+..+..+...+....++....|++.||+..|+......++-++||.+.|.+.
T Consensus 357 ~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 357 LGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF 412 (451)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeE
Confidence 67778888888888888999999999999999999999999999999999998886
No 99
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=3.7e-16 Score=153.48 Aligned_cols=437 Identities=14% Similarity=0.076 Sum_probs=244.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+|....+.-+..+.+.+ .....+.+.+-+....|++..|..++......+..+++..+|.++|++ ||||...+...+.
T Consensus 76 q~yl~~~ag~gwmad~m-~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t 153 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAM-EMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVT 153 (528)
T ss_pred hhhHHHHhhhHHHHHHH-HHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHH
Confidence 33444555555555543 345667777778888999999999999999999999999999999998 9999999888877
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.+..++...+ +++..+++.|.+.|+|.|+ .|...++-.|..|... |.
T Consensus 154 ~v~~~is~~s--------------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~ 200 (528)
T KOG0253|consen 154 GVFGVISGAS--------------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RW 200 (528)
T ss_pred HHHHHhhcCC--------------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CC
Confidence 7777766665 4778999999999999999 7888888899888887 77
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccc-cCCCCCchhHHHHHHHHHHhcc
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRF-KKPRGSPLTVIWRVLLLAWKKR 269 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
.-.-.. ..+.+|.++...+.-.+..+.||||-...+.....++....+ ..++.++ .-.++++.+.+ ..+-+..+..
T Consensus 201 ~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~-w~~ESpRf~~~~G~~~kAl-etL~kiArmN 277 (528)
T KOG0253|consen 201 LLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLV-WVYESPRFYLAKGDDYKAL-ETLHKIARMN 277 (528)
T ss_pred cchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHh-hcccCcchhhhcCChHHHH-HHHHHHHHhc
Confidence 666555 678999999988887777889999987766654444443333 3333322 22233333322 2222333333
Q ss_pred CCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhh
Q 008231 270 SHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYS 349 (573)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 349 (573)
+...|......+.+ ++ .+++....++.+.. . ..+.......+-. -+-+|+.+.+...++.+...|...-
T Consensus 278 g~qlplgvl~~s~~-~~---~e~e~~~~~~~~~~--a---~ke~rg~~~nLls--p~lrkttlllw~iwfgnafsyyg~V 346 (528)
T KOG0253|consen 278 GKQLPLGVLESSAI-DR---QEQEESDLDDSKSS--A---AKEVRGGTTNLLS--PKLRKTTLLLWRIWFGNAFSYYGSV 346 (528)
T ss_pred CCCCCcceeeeehh-hh---hhhhhhchhhhhhc--c---ccccccchHhhcC--hHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 33333222111111 00 00001111111100 0 0000001100000 0112333333334433333222222
Q ss_pred cccchhhh-----------hhhccccccc-cceeccccc-chhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHH
Q 008231 350 QMTTFTVE-----------QATFMNRKIG-SFTVPSGSL-SAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVG 416 (573)
Q Consensus 350 ~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 416 (573)
..++-+.. ...++..+.. ......... ..+.++.-.....+..+++++++||.. +.
T Consensus 347 Llttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT-----------Ma 415 (528)
T KOG0253|consen 347 LLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT-----------MA 415 (528)
T ss_pred HHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH-----------HH
Confidence 22211110 0001111000 000000000 001111111112233455555577643 66
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHH
Q 008231 417 TGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISM 496 (573)
Q Consensus 417 ~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~l 496 (573)
..+++..+..+.+.... +......++..+ -+.....+...|.|..|++|...|+++.|....+..+
T Consensus 416 l~l~~f~iflfll~~c~----------~rn~~tvllf~a----rafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRI 481 (528)
T KOG0253|consen 416 LSLILFGIFLFLLTTCK----------TRNAYTVLLFTA----RAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARI 481 (528)
T ss_pred HHHHHHHHHHHHHHHhc----------CcchhHHHHHHH----HHHHhchheEEEEecCcccchhhhhcchhhhhhHHhh
Confidence 66666655554443321 111122222222 2333344577899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 008231 497 GMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNV 555 (573)
Q Consensus 497 g~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 555 (573)
|+++.|++. +..+.+ ......+.+++++++++...++.-++|+|.
T Consensus 482 ggI~~p~iA-~~~e~s-------------~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 482 GGIFSPVIA-MRAELS-------------TSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hhhhhhHHH-HHhccc-------------eeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 999999998 444321 123345677788888887777777777664
No 100
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=1.9e-17 Score=167.48 Aligned_cols=439 Identities=13% Similarity=0.022 Sum_probs=235.6
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchh
Q 008231 28 KTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDL-------HLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRY 100 (573)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~-------~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr 100 (573)
.+++.+.+.+.-++-+.+.++.+.+..+.+.+-.-.. |.++...+.+..+..++..+++++.|+++||+ |||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cch
Confidence 3445566777777777888887766555544322222 35667788888999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCC
Q 008231 101 LTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDT 180 (573)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~ 180 (573)
+++...++++.+++++++++...+ +.-.-++.++..|++.|+|.|+-+|...+..+|...+
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~-------------------~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~ 175 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTT-------------------SPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANK 175 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCC-------------------CCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhh
Confidence 999999999999999777753222 1113567788999999999999999999999998887
Q ss_pred CCchHHHhHHHHHHH----HHHHHHhhhHHHHHHhhhhhccc-----------chhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 181 SDPKEEKAMIFFFNR----FYFAISIGSLFAVIVLVYVQDNV-----------GRGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 181 ~~~~~~~~r~~~~~~----~~~~~~ig~~~~~~~~~~l~~~~-----------g~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
+. ||...+. +.++.-.|++++.++.+-.-... =||..|.+.++..++.. .+-+..|+.
T Consensus 176 ~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l-y~Rl~M~Et 248 (538)
T KOG0252|consen 176 KT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL-YFRLKMPET 248 (538)
T ss_pred cc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhhcCCcc
Confidence 77 7776654 45555555555555444332211 27777765554332211 111222222
Q ss_pred cccCC-CCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhh
Q 008231 246 RFKKP-RGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTE 324 (573)
Q Consensus 246 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (573)
++-.. ...... .+.++ ..+. .+ ...+++.....+. ..+..+.-+....
T Consensus 249 ~~Y~al~~~~~~-------~a~~d-~~k~-~~----~~~~~~~~~~~~~------------------~~~~~~~~~F~~~ 297 (538)
T KOG0252|consen 249 ARYTALVSKKLK-------QAAGD-MKKV-LS----VDIEAESTAESDV------------------PPPSNSFGLFSRL 297 (538)
T ss_pred hhHHHHhhcCHh-------hhhhc-cccc-cc----cccchhhccccCC------------------CCcccccchHHHH
Confidence 11110 000000 00000 0000 00 0000000000000 0000010000001
Q ss_pred HHHH--HHHHhHHHHHHHHHHHHHHhhcccchhhhhhhcccccccccee-cccc----cchhhHHHHHHHHHh-----hh
Q 008231 325 VEEV--KMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTV-PSGS----LSAFLFITILLFTSL-----NE 392 (573)
Q Consensus 325 ~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~~~-----~~ 392 (573)
...+ +.++ ..+..++..-...++.-..+..-++ .. ++.- .... -.+........++.+ ..
T Consensus 298 f~~~hg~~Ll------gt~~~WFllDiafy~~nL~~s~I~~-~i-g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv 369 (538)
T KOG0252|consen 298 FLRWHGKHLL------GTAGTWFLLDIAFYGQNLFQSVIFS-AI-GVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTV 369 (538)
T ss_pred HHHHHHHHHH------HHHHHHHhhhhhhhccccHHHHHHH-hh-ccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEE
Confidence 1111 1222 1122222211111111111110000 00 0000 0000 011111111122211 22
Q ss_pred hhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccc-hhHHHHHHHHHHHHHHhhhhhhh
Q 008231 393 KVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQIS-AFWLVPQYFLVGAGEAFVYVGQL 471 (573)
Q Consensus 393 ~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~lv~~~~l~g~~~~~~~~~~~ 471 (573)
.++|.++|++ .-+.|++++.+.+++++... .+... ...++...+.+.++...-+....
T Consensus 370 ~~id~iGRk~-----------iq~~GF~~~~i~~~~~~~~y----------~~~~~~~Gf~v~y~l~~ff~NFGPn~ttf 428 (538)
T KOG0252|consen 370 YFIDIIGRKY-----------IQLMGFFIMTIFFFVIAGPY----------NQLENTIGFVVLYSLTFFFGNFGPNATTF 428 (538)
T ss_pred EEeehhhhHH-----------HHHhhHHHHHHHHHHHcCCc----------ccccccCceeehHHHHHHHHhcCCCceeE
Confidence 3344445543 25778888888877776542 10111 11122222333344444456667
Q ss_pred heeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 008231 472 EFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKH 551 (573)
Q Consensus 472 ~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 551 (573)
.+..|.+|.+.||+..|+...+.-+|.+++.....+..+. . .+. ..+....++++++++.++.++++++ +++
T Consensus 429 ivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~---~-yp~---~~g~~~v~~i~~~~~~~gi~~T~l~-pEt 500 (538)
T KOG0252|consen 429 IVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH---N-YPP---NIGVRNVFIILAGCMLLGILFTLLI-PET 500 (538)
T ss_pred EeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc---c-CCc---cccchHHHHHHHHHHHHhHheeEEe-ecc
Confidence 7889999999999999999999999999999998877652 1 111 2334578899999999888777665 488
Q ss_pred chhhhccccC
Q 008231 552 QYNVQHRVKG 561 (573)
Q Consensus 552 ~~~~~~~~~~ 561 (573)
++++.++...
T Consensus 501 k~~~leei~~ 510 (538)
T KOG0252|consen 501 KGKSLEEISN 510 (538)
T ss_pred cccCHHHhcC
Confidence 8887766543
No 101
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.76 E-value=6.5e-16 Score=161.78 Aligned_cols=384 Identities=13% Similarity=0.086 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 008231 38 ILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLL 117 (573)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 117 (573)
+....++..+.+-...++++.|+++ .|+|..|.|.+.++..+...+.++++|.++||+..+||.+.+..++.++...+.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555667889999985 689999999999999999999999999999998456777777766666655444
Q ss_pred HhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHH
Q 008231 118 TSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFY 197 (573)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 197 (573)
.... +++.+++..++..+......|...++..+...+ ++.-+|..+
T Consensus 86 ~~~~--------------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iR 131 (400)
T PF03825_consen 86 AFSS--------------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIR 131 (400)
T ss_pred HHhc--------------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcch
Confidence 4432 455666666667777676677777776666553 334456666
Q ss_pred HHHHhhhHHHHHH-hhhhhcccc---hhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCC
Q 008231 198 FAISIGSLFAVIV-LVYVQDNVG---RGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPY 273 (573)
Q Consensus 198 ~~~~ig~~~~~~~-~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (573)
...++|.+++... ++++....+ ..+.+++.+...++.... .+..|+.+.++..+++.+
T Consensus 132 lwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~-~l~lp~~~~~~~~~~~~~----------------- 193 (400)
T PF03825_consen 132 LWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGF-ALFLPKTPPKRSAKESVK----------------- 193 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHH-HHhCCCCccccccCCCcc-----------------
Confidence 6666776666443 233332222 224455554433222222 222333221110000000
Q ss_pred CCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccc
Q 008231 274 PDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTT 353 (573)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 353 (573)
+....+ .+ ...++++....++..++........+. +..
T Consensus 194 -------------------~~~~~~-----------------~~-----~llk~~~~~~Fll~~~l~~~~~~~~~~-f~~ 231 (400)
T PF03825_consen 194 -------------------KLLGLD-----------------AL-----KLLKNPRFLVFLLAAFLIGISHAAYYT-FFS 231 (400)
T ss_pred -------------------cccchH-----------------HH-----HHhcCccHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 000000 00 011111122222222222222212211 111
Q ss_pred hhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 008231 354 FTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIE 433 (573)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~ 433 (573)
.+..+..... ....+.+.++..+.-++.....+++ .+|. +..+.+..+.+..++-..+++...
T Consensus 232 ~yl~~~gg~~------~~~~g~~~~l~~~aEi~~f~~~~~~----~~r~-------g~~~ll~~a~~~~~vR~~l~a~~~ 294 (400)
T PF03825_consen 232 IYLQELGGYS------GSTIGILWALGVVAEIPFFFFSGRF----LKRF-------GIKWLLLLALVAYAVRWLLYAYFS 294 (400)
T ss_pred HHHHHcccch------hhHHHHHHHHHHHHHHHHHHHHHHH----HHhc-------CHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111110000 0011222334444444444444554 4543 344558888888888888777651
Q ss_pred HHHHhhcccCCccc-chhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhh
Q 008231 434 QQRRETSVQKHIQI-SAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSA-ISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 434 ~~~~~~~~~~~~~~-~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~-~~lg~~ig~~~~~~i~~~ 511 (573)
++.. .+....+...++|+..++.......|+.+.+|++.|++++++++.. .++|+.+|..+.|++.|.
T Consensus 295 ----------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 295 ----------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred ----------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 1111 1112233346799999999999999999999999999999998854 789999999999999875
Q ss_pred hccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 008231 512 TNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAM 549 (573)
Q Consensus 512 ~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 549 (573)
.+.+. .......+.+.+++.++..++++++.|
T Consensus 365 ~g~~~------~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 365 FGARG------MFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred hcchh------hhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 43111 011223455556666666666665544
No 102
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.76 E-value=1.8e-17 Score=164.76 Aligned_cols=150 Identities=15% Similarity=0.059 Sum_probs=136.2
Q ss_pred hhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccccccccc
Q 008231 62 GDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQC 141 (573)
Q Consensus 62 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (573)
.+++-++++.|++.+.+.+.+.+..++.|.+.||+ |+|-.+++|+.++...++++++..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~-------------------- 157 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN-------------------- 157 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc--------------------
Confidence 35667788999999999999999999999999998 999999999999999999999975
Q ss_pred ccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchh
Q 008231 142 IEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRG 221 (573)
Q Consensus 142 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~ 221 (573)
++++++++|.++|+|.++...+..++++|.+|++++ |++++|+.-....+|-.+||.++|.+.+..|.+
T Consensus 158 ------sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~ 226 (464)
T KOG3764|consen 158 ------SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKS 226 (464)
T ss_pred ------hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCc
Confidence 456999999999999999999999999999998763 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCc
Q 008231 222 WGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 222 ~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
.+|.+.++.+++...+-++..+
T Consensus 227 aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 227 APFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred CcHHHHHHHHHHHHHHHHheeC
Confidence 9999998888877665555444
No 103
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.76 E-value=1.2e-16 Score=177.11 Aligned_cols=206 Identities=13% Similarity=0.119 Sum_probs=152.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
..+++.+.+.+....+....+.++.+...+.++++++++.++.|++.+.+.+++.++.++.|+++||+ |||+.+.++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~l 106 (633)
T TIGR00805 28 FSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCA 106 (633)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHH
Confidence 34455444444444555555567777788889999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhccCC----------------CCCCCCCcccccc-------ccccccch--hhHHHHHHHHHHHHHhcC
Q 008231 109 VTALVVGLLTSATSIP----------------SMRPPQCDDYRRK-------HHQCIEAN--GKQLAMLYAALYTIALGG 163 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~l~g~g~ 163 (573)
+++++.+++++...+. ......|.+.... +..|.... ...+..++++|+++|+|.
T Consensus 107 l~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 107 IMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 9999999988753110 0001123211000 00111111 113567889999999999
Q ss_pred ccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhccc----------------------chh
Q 008231 164 GGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNV----------------------GRG 221 (573)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~----------------------g~~ 221 (573)
+...+...+++.|++|+++ |+..+++++.+..+|..+|+++++++.+.+ +|+
T Consensus 187 ~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred CcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 9999999999999999998 999999999999999999999999887532 266
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 008231 222 WGYGISAGTMVVAAAILLIG 241 (573)
Q Consensus 222 ~~f~~~~~~~~~~~~~~~~~ 241 (573)
..|++.+++.++..+.+++.
T Consensus 261 l~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 67777766655544444433
No 104
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.76 E-value=1.8e-16 Score=163.44 Aligned_cols=391 Identities=11% Similarity=0.016 Sum_probs=223.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..|......+.-.+.+-...++.+.++++..|+|.+|.|.+.++..+...+.+|+.|.++||. |.||-++....+..+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 4566666666776777777889999999999999999999999999999999999999999998 866655544332221
Q ss_pred --HH-HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 113 --VV-GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 113 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
+- ....+..- --.-++++.++.++..+.......... |..-++.+ .+.
T Consensus 86 l~~pff~~v~~pl-------------------------l~~n~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~s---r~~ 136 (412)
T PF01306_consen 86 LFGPFFIYVFGPL-------------------------LQSNFWLGAIIGGIYLGLVFNAGVPLS-EAYAERVS---RRN 136 (412)
T ss_dssp TCHHHHHHTHHHH-------------------------HHTT-HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHcccchHH-HHHHHHHH---HHh
Confidence 22 22122100 001123333344444444433333322 32222111 114
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhcc
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKR 269 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
+.=+|-.+..+++|.+++..++|.+.+ .+.+..||+.....++..++....+++..++.+..+.
T Consensus 137 ~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~--------------- 200 (412)
T PF01306_consen 137 GFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA--------------- 200 (412)
T ss_dssp SS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT---------------
T ss_pred cCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc---------------
Confidence 455677888899999999999999986 5667788876665544444444443322111110000
Q ss_pred CCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHH-HHHHHh
Q 008231 270 SHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCI-LFWTVY 348 (573)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 348 (573)
...+.+.. ..+ ....+.+.|+............ .+....
T Consensus 201 -----------------~~~~~~~~---------------------~~~--~~~~l~k~~~fw~~~l~v~g~~~~Y~vfd 240 (412)
T PF01306_consen 201 -----------------LGAKKDKV---------------------SLK--DVLSLFKMRNFWFFVLFVIGVAAIYDVFD 240 (412)
T ss_dssp -----------------SSS---------------------------HH--HHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------cccCCCCC---------------------cHH--HHHHHhcchhHHHHHHHHHHHHHHHHHHH
Confidence 00000000 000 0011112223333322333333 344444
Q ss_pred hcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 008231 349 SQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIV 428 (573)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~ 428 (573)
+|.+.++.......... ..-.+.+.++..+.-.+...+..+++.|++ .++.+.++..++.+-.+.
T Consensus 241 qqf~~y~~~~f~~~~~g----~~~~G~l~s~~v~~E~~~m~~~p~li~rig-----------~k~~Lllag~i~~iRi~~ 305 (412)
T PF01306_consen 241 QQFPIYFASFFQSAGQG----NQMYGYLWSVQVFLEALMMFFSPWLINRIG-----------AKNLLLLAGVIMAIRIIG 305 (412)
T ss_dssp HHHHHHHHHTSSSHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccC----hhHHhHHHHHHHHHHHHHHHHHHHHHHhcC-----------hHhHHHHHHHHHHHHHHH
Confidence 55444443321111000 001222333334444444455555543333 334467777777788777
Q ss_pred HHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 008231 429 SAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLF-LSAISMGMFVSSMLVSI 507 (573)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~-~~~~~lg~~ig~~~~~~ 507 (573)
.++.+ +.+++++.-.++++-..+......-|+.+.+|+|..++...+. ++..++|.++.+.+.|.
T Consensus 306 ~~~~~--------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 306 SGFAT--------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HHT----------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred Hhhhc--------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 76652 5667788889999999999999999999999999999999986 58899999999999999
Q ss_pred HhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 508 VDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMK 550 (573)
Q Consensus 508 i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 550 (573)
+.|..+ +...|++++.+.++..++..+..++
T Consensus 372 lyd~~G------------~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 372 LYDRIG------------FQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHH------------HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hHhhcC------------cHHHHHHHHHHHHHHHHHheeeecC
Confidence 987532 3457888888777777766666544
No 105
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.6e-15 Score=152.07 Aligned_cols=151 Identities=16% Similarity=0.124 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
.+++..-|+.+.......-.+.+.+++.++++..|++.+...+..++.+++++.|++.+|+ |+|+.++.|+.++++|+.
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 3333333433333445566778889999999999999999999999999999999999998 999999999999999998
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
+..=+++. .++..++++.++.|.|.+.......++++.+.|+++ -.+-+++
T Consensus 94 lF~pAa~~-----------------------~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl 144 (422)
T COG0738 94 LFWPAASS-----------------------KSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNL 144 (422)
T ss_pred HHhhhhhh-----------------------hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHH
Confidence 88644321 477899999999999999999999999999999876 5566777
Q ss_pred HHHHHHhhhHHHHHHhhhhhc
Q 008231 196 FYFAISIGSLFAVIVLVYVQD 216 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~ 216 (573)
.+....+|+.+||++++++..
T Consensus 145 ~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 145 AQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHhhhhHHHHHHHHHHHHHH
Confidence 778889999999999998876
No 106
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.76 E-value=4.3e-22 Score=213.47 Aligned_cols=394 Identities=16% Similarity=0.073 Sum_probs=218.9
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHH
Q 008231 70 KSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQL 149 (573)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (573)
+.++..+...++..++.+++|+++||+ |||+++.++..+..++.++.++++.. .+.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-----------------------~~~ 102 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-----------------------NNF 102 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-----------------------ccc
Confidence 467889999999999999999999999 99999999999999999999987411 156
Q ss_pred HHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcc---cchhHHHHH
Q 008231 150 AMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDN---VGRGWGYGI 226 (573)
Q Consensus 150 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~---~g~~~~f~~ 226 (573)
+.+.++|++.|++.|+..+....++.|..|++. |++..++.+....+|..++..+.-.+... .+||..+.+
T Consensus 103 ~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~ 176 (451)
T PF00083_consen 103 WMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIF 176 (451)
T ss_pred ccccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccc
Confidence 789999999999999999999999999999998 99999999999999998887776544332 359998887
Q ss_pred HHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhh
Q 008231 227 SAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDN 306 (573)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (573)
..+..++..+.. ...||.++---.+.+.++..+.+.. .++. +...++..+..++....
T Consensus 177 ~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~~l~~-~~~~----~~~~~~~~~~~~~~~~~---------------- 234 (451)
T PF00083_consen 177 GAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEKVLRK-LRGK----EIEDEEIEEIKAEKKES---------------- 234 (451)
T ss_pred cccccccccccc-cccccccceeccccccccccccccc-cccc----ccccccccccccccccc----------------
Confidence 776554433332 2333322110000000000000000 0000 00000000000000000
Q ss_pred hhhccccCCcccccchhhHHHHHHHHhHHHHHHHH-HHHHHHhhcccchhhhhhhccccccccceeccc-ccchhhHHHH
Q 008231 307 AVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATC-ILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSG-SLSAFLFITI 384 (573)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 384 (573)
++....|+....... .+++.+..+.+.... ...+.....+.+.+... . +.... .......+..
T Consensus 235 ----~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~---------~~~~~~~~~~~~~~~~ 299 (451)
T PF00083_consen 235 ----QESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-A---------GISNSFLATLILGLVN 299 (451)
T ss_pred ----cccceeeeecccccc-ccccccccccccccccccccccccccccccccc-c---------cccccccccccccccc
Confidence 000011211111110 111222211111111 00000011111111110 0 11111 1111111222
Q ss_pred HHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcccCCcc--cchhHHHHHHHHHHH
Q 008231 385 LLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSA-VIEQQRRETSVQKHIQ--ISAFWLVPQYFLVGA 461 (573)
Q Consensus 385 l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~-~~~~~~~~~~~~~~~~--~~~~~lv~~~~l~g~ 461 (573)
++...+...+.++++||.. +..+.+++.++.+.++ ..... ...+ .....++........
T Consensus 300 ~~~~~~~~~~~~~~GRr~~-----------~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~~l~~~~ 361 (451)
T PF00083_consen 300 FLGTLLAIFLIDRFGRRKL-----------LIIGLLLMAICSLILGIIFFLG-------VSSSSWWSILSIVFLALFFAF 361 (451)
T ss_pred ccccccccccccccccccc-----------cccccccccccccccccccccc-------cccccccccccceeeeecccc
Confidence 2222333355555566532 4555666555555553 11000 0110 122222222222222
Q ss_pred HHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHH
Q 008231 462 GEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNF 541 (573)
Q Consensus 462 ~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~ 541 (573)
......+..+.+..|.+|.+.|+++.|+......+++++++.+.+.+.+..+ ....+++.++++++..
T Consensus 362 ~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~------------~~~~~~i~~~~~~i~~ 429 (451)
T PF00083_consen 362 FSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG------------GWGVFLIFAGVCLIAI 429 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc------------ccccchhhHHHHHHHH
Confidence 2224457777899999999999999999999999999999888777654211 1245677788888888
Q ss_pred HHHHHHHhhcchhhhcccc
Q 008231 542 MVFLFFAMKHQYNVQHRVK 560 (573)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~ 560 (573)
++.+++.||+|+++.+|.+
T Consensus 430 i~~~~~lpET~g~~l~ei~ 448 (451)
T PF00083_consen 430 IFVYFFLPETKGKTLEEIQ 448 (451)
T ss_pred hheeEEEeeCCCCCHHHHH
Confidence 8888889999988766554
No 107
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.75 E-value=2.9e-15 Score=157.55 Aligned_cols=176 Identities=13% Similarity=-0.038 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHH--HHHHHHHHHHHHhHH-HHHhhhccchhHHHHHHHHHH-H
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATI--VTNFMGTLNLLGLLG-GFLADAKLGRYLTVAIFASVT-A 111 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Grr~~~~~~~~~~-~ 111 (573)
..+...-+.+.+.+....+.+|.|++ +.|.|..+.|.. .+.......+.+|+. ++.+||+ ||||.+++...+. +
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHHH
Confidence 44555556777777677788888887 569999999997 456677777777777 5579998 9999976665332 2
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
+....++... +. ......++....+.++..+...+...++..|..++++ ++.
T Consensus 82 ~~~~~~~~~~--~~--------------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~ 133 (390)
T TIGR02718 82 ACLASLALVG--PD--------------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAK 133 (390)
T ss_pred HHHHHHHcCC--cc--------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhH
Confidence 2222222110 10 0112223334444556666666777777777776666 788
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhc
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIG 241 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 241 (573)
..+....+..+|..+|+.+.+++.+.+|||.+|++.++..++..+..++.
T Consensus 134 ~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 134 GNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888899999999999999999999999998887766555544443
No 108
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=4e-16 Score=167.46 Aligned_cols=418 Identities=15% Similarity=0.101 Sum_probs=251.9
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISM---NLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~---~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
|+..++.|+.++..+++.. .+-..+.++++.+..+.+|+.++......+..|+.+.+.||+ |.|.+.++|.++.++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 6666666666666555543 344567789999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHH-HHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAAL-YTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
|.++.++++ +++.+++.- ++.|+|.++........+..+|+++ |+.
T Consensus 124 g~~lssF~~--------------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~l 170 (509)
T KOG2504|consen 124 GLLLSSFAT--------------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RAL 170 (509)
T ss_pred HHHHHHHHh--------------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHH
Confidence 999999985 566666654 5689999999999889999887754 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCC
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSH 271 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (573)
+.|+...+..+|.++-|.+..++.+.+|||+.+++.....+-..+.....+|.....++..+ .+ .+....
T Consensus 171 A~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~--~~--------~~~~~~ 240 (509)
T KOG2504|consen 171 ATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEE--KD--------LRNSAA 240 (509)
T ss_pred HHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhh--hh--------hccccc
Confidence 99999999999999999999999999999999987777665555555555553332222200 00 000000
Q ss_pred CCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCccc-----c-cc---hhhHHHHHHHHhHHHHHHHHH
Q 008231 272 PYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWI-----V-ST---VTEVEEVKMVLKLLPIWATCI 342 (573)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~---~~~~~~~~~~l~~~~~~~~~~ 342 (573)
..+........ ...+... ...+ ......... ++....++ . +. ....+++..+...+...+...
T Consensus 241 ~~~~~~~~~~~---~~~~~~~--~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~ 312 (509)
T KOG2504|consen 241 SVESTPKPVEL---RISERDS--GLKK-LSLSNLATL--KRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYL 312 (509)
T ss_pred ccccccccccc---ccccCCC--CCCc-ccccchhhh--hhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHH
Confidence 00000000000 0000000 0000 000000000 00000010 0 00 111111111111111111111
Q ss_pred HHHHHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHH
Q 008231 343 LFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFS 422 (573)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~ 422 (573)
.++..+. ++.... . ..+........+.++..+..+++-++.+++.|+.. ........++++..
T Consensus 313 g~~~p~~----~l~~~~---~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~---------~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 313 GFNVPFV----YLPSYA---K-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG---------IRALVLFLLTLLIA 375 (509)
T ss_pred HHHHHHH----HHHHHH---h-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc---------cchHHHHHHHHHHH
Confidence 1111111 111111 1 11111123344455555556666666666654432 12233356666666
Q ss_pred HHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHH
Q 008231 423 VIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSS 502 (573)
Q Consensus 423 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~ 502 (573)
+++.+..... ...+.++...+++|++.+.........+.+..+.+.-..+.|+..++..++..+|+
T Consensus 376 gl~~~~~p~~--------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp 441 (509)
T KOG2504|consen 376 GLARLFLPFA--------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP 441 (509)
T ss_pred HHHHHHHHHh--------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence 6666544443 24566777788889888888877777888999999999999999999999999999
Q ss_pred HHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 008231 503 MLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFF 547 (573)
Q Consensus 503 ~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 547 (573)
.+.|++.+.++ ++...|...+...++++...++.
T Consensus 442 Piag~~~d~tg-----------~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 442 PIAGLLYDITG-----------NYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred ccceeeeeccC-----------CeeeehhhcChHHHHHHHHHHHh
Confidence 99997776542 23445555565555555444333
No 109
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.74 E-value=1.7e-15 Score=162.86 Aligned_cols=380 Identities=13% Similarity=0.106 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccc-----hhHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLG-----RYLTVAIFAS 108 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~~~~~~~ 108 (573)
...++...-+.+.+. +.+...+++++.+++|+|.++.+...+...+...+-++ +|+++||+ + ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHH
Confidence 444555566777777 77777888999999999999999999999988888655 99999998 7 7777777766
Q ss_pred HHH-HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 109 VTA-LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 109 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
+.. ++...++... .......+.+++.+++.+.......++..|..+ ++++
T Consensus 104 l~~~~~~~~l~~~~-------------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~--- 154 (468)
T TIGR00788 104 LGSAILYGLLPGKV-------------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS--- 154 (468)
T ss_pred HHHHHHHHhccccc-------------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---
Confidence 552 3222222111 123333446788999999999999999999998 4321
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccc-cCCCCCchhHHHHHHHHHH
Q 008231 188 AMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRF-KKPRGSPLTVIWRVLLLAW 266 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (573)
.++...+..+...++|..+|+.++|++.+.+||+..|++.++..++..+...+ .+|.+. ..++.....
T Consensus 155 ~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~-~~E~~~~~~~~~~~~~---------- 223 (468)
T TIGR00788 155 AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL-SKERRAFVRPRIGTYL---------- 223 (468)
T ss_pred cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh-cccccccccccccccc----------
Confidence 13445556666678999999999999999999999999887766665333333 233210 011000000
Q ss_pred hccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHH-HH
Q 008231 267 KKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCIL-FW 345 (573)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 345 (573)
..+. .. ......+..+. .++ ........+.+...+ ++... +.
T Consensus 224 ------------~~~~------~~-~~~~~~~~~~~-------------~~~--~l~~~l~~~~i~~~l---~fifl~~~ 266 (468)
T TIGR00788 224 ------------EMNM------AL-LTLGVLANVKV-------------QIL--GLRGAIQLLEIAKPL---IFIFLSYA 266 (468)
T ss_pred ------------hhhh------hh-hhhhHHHHHHH-------------HHH--HHHHHHhcHHHHHHH---HHHHHHHh
Confidence 0000 00 00000000000 000 000000111111111 11111 11
Q ss_pred HHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHH
Q 008231 346 TVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIA 425 (573)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~ 425 (573)
.........+.... ..++......+.+.....++.++...+.+++. +|. +..+.+..+.++.+++
T Consensus 267 ~~~~~~~~~f~~~~----~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~----~~~-------~~r~~l~~~~~l~~~~ 331 (468)
T TIGR00788 267 NLPGASGSVFCATT----QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFL----KTF-------PYRLLFGVTTLLYTLS 331 (468)
T ss_pred hcCCCCceeEEEEc----ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHH----hhC-------CHHHHHHHHHHHHHHH
Confidence 11111111111111 11111122233444445555556666655553 332 3334466666666665
Q ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 426 MIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLV 505 (573)
Q Consensus 426 ~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~ 505 (573)
.+........ .+. .......+++....++.+++.++...+...++.+..|++.+|+..|+.++..++|..+++.++
T Consensus 332 ~~~~~~l~~~-~~~---~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~g 407 (468)
T TIGR00788 332 SLFDLILVKR-WNL---AFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLG 407 (468)
T ss_pred HhCceeeeec-ccc---ccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHH
Confidence 5433211000 000 000012233444567778888888888899999999999999999999999999999999998
Q ss_pred HHHhhhh
Q 008231 506 SIVDKIT 512 (573)
Q Consensus 506 ~~i~~~~ 512 (573)
+.+.+..
T Consensus 408 g~l~~~~ 414 (468)
T TIGR00788 408 VLLMETI 414 (468)
T ss_pred HHHHHHc
Confidence 8887643
No 110
>PTZ00207 hypothetical protein; Provisional
Probab=99.73 E-value=1.4e-14 Score=156.93 Aligned_cols=175 Identities=13% Similarity=-0.021 Sum_probs=130.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
.++|..+...+....+.... |++ +.....+++++|+|..+.+++.++.. ...++.++.|+++||+ |+|+++.++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~-y~f-sv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFM-YAF-NLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 45665555555555544433 344 35556789999999999999987743 4456777899999998 99999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
++.++.++++++.+-. ...+++.+++.|++.|+|.+...+.....+.++|| ++
T Consensus 100 l~~iG~ll~ala~~~~--------------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------ 152 (591)
T PTZ00207 100 VFCLGTLLFALTFQEV--------------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------ 152 (591)
T ss_pred HHHHHHHHHHHHhccc--------------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------
Confidence 9999999999862100 01367889999999999999888888888999997 45
Q ss_pred HHHHHHHHHHHHHhhhHH-HHHHhhhhhcccchhHHHHHHHHHHHHHHH
Q 008231 189 MIFFFNRFYFAISIGSLF-AVIVLVYVQDNVGRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~-~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 236 (573)
||++.|+...+.++|+.+ +++..+++. .+|++.|++.++..++..+
T Consensus 153 RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 153 RGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHH
Confidence 999999999999999975 555555554 3577777766555444333
No 111
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.71 E-value=4.1e-15 Score=158.49 Aligned_cols=357 Identities=16% Similarity=0.085 Sum_probs=226.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhh----hccchhHHH-HHHHHHHHHHHHH
Q 008231 42 ELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLAD----AKLGRYLTV-AIFASVTALVVGL 116 (573)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~~~-~~~~~~~~~~~~~ 116 (573)
.+...+.++....+++.|+++.+|+++...|.+..+..+...+..|+.|+++| |+ ||||.. +++..+.+++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 34555555566778899999999999999999999999999999999999999 77 877654 4677777777766
Q ss_pred HHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHH
Q 008231 117 LTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRF 196 (573)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 196 (573)
+.... |. ..........+++..++..++......+..++..|..++.++ |.+..+..
T Consensus 89 lf~~~--p~----------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~ 145 (428)
T PF13347_consen 89 LFSPP--PA----------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWR 145 (428)
T ss_pred hhccc--cc----------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHH
Confidence 66431 10 000001233345666667888899988999999999986532 99999998
Q ss_pred HHHHHhhhHHHHHHhhhhhccc-------chhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhcc
Q 008231 197 YFAISIGSLFAVIVLVYVQDNV-------GRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKR 269 (573)
Q Consensus 197 ~~~~~ig~~~~~~~~~~l~~~~-------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (573)
.....+|..+...+.+.+.+.. +|++...+.++..++..++..+..+|.+.+.++.++
T Consensus 146 ~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~--------------- 210 (428)
T PF13347_consen 146 MIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK--------------- 210 (428)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc---------------
Confidence 8888888876666666554322 578777777666665555545544441111100000
Q ss_pred CCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhh
Q 008231 270 SHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYS 349 (573)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 349 (573)
..+..+ .+ ....+.|.....+.........+....
T Consensus 211 -----------------------~~~~~~-----------------~~-----~~~~~nr~~~~l~~~~~~~~~~~~~~~ 245 (428)
T PF13347_consen 211 -----------------------KISLRD-----------------SL-----RSLFRNRPFRILLLAFFLQWLAFALMN 245 (428)
T ss_pred -----------------------cccccc-----------------ch-----hhhcccchHHHHHHHHHHHHhhhhhhh
Confidence 000000 00 000111111111111111111111111
Q ss_pred cccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHH
Q 008231 350 QMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVS 429 (573)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~ 429 (573)
....++.....+.+ -..+.+..+..+..++..++..++.+|+.+|+. +..+.++.+++.+++
T Consensus 246 ~~~~y~~~~vl~~~-------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~-----------~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 246 TFLPYYFTYVLGNE-------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV-----------YIIGLLLAALGFLLL 307 (428)
T ss_pred hHHHHHHHHHhcCc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee-----------hhhhHHHHHHHHHHH
Confidence 11122222211111 112334445566677778888888766655532 677777777777776
Q ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccC-------chhHHHHHHHHHHHHHHHHHHHH
Q 008231 430 AVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGP-------ERMKSMSTGLFLSAISMGMFVSS 502 (573)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p-------~~~rg~~~gi~~~~~~lg~~ig~ 502 (573)
.+... .+.+++.+..++.|++.+..++..+++..|..+ ++..|...|++++...++..+++
T Consensus 308 ~~~~~------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~ 375 (428)
T PF13347_consen 308 FFLGP------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAG 375 (428)
T ss_pred HHHHh------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHH
Confidence 66521 356677888899999999999999999999886 35579999999999999999999
Q ss_pred HHHHHHhhhh
Q 008231 503 MLVSIVDKIT 512 (573)
Q Consensus 503 ~~~~~i~~~~ 512 (573)
.+.+.+.+..
T Consensus 376 ~i~g~~l~~~ 385 (428)
T PF13347_consen 376 AIVGLLLALV 385 (428)
T ss_pred HHHHHHHHHh
Confidence 9999887654
No 112
>PRK11462 putative transporter; Provisional
Probab=99.68 E-value=9.3e-14 Score=149.15 Aligned_cols=174 Identities=10% Similarity=0.068 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHHHH-HHHHHHHH
Q 008231 37 LILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK---LGRYLTVA-IFASVTAL 112 (573)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~-~~~~~~~~ 112 (573)
.-.++.+..++.+..+..+++.|+++.+|+++..+|.+..+.-+.-.+.-|+.|+++||. +||||..+ ++....++
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 334556666677777778899999999999999999999999999999999999999972 38876655 56566777
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+.+++......+ .. .....+++.-.+..++......+..++.+|+.++.++ |.+.
T Consensus 93 ~~~llf~~p~~s-------------------~~-~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l 147 (460)
T PRK11462 93 VCVLAYSTPDLS-------------------MN-GKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISL 147 (460)
T ss_pred HHHHHHhCCCCC-------------------cc-hHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHH
Confidence 766655432100 00 1223344444456777788888888999998875432 9999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhccc-------chhHHHHHHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNV-------GRGWGYGISAGTMVVAA 235 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~-------g~~~~f~~~~~~~~~~~ 235 (573)
.++...+.++|..+++.+...+.+.. ||+....+.++..++..
T Consensus 148 ~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 148 QSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 99999999999888877765544332 45555444444333333
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.64 E-value=6.2e-13 Score=138.64 Aligned_cols=366 Identities=12% Similarity=0.065 Sum_probs=226.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHH-HHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK---LGRYLT-VAIFASVT 110 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~-~~~~~~~~ 110 (573)
-.--..+.+..+..+-.+..++..|+++..|+|...+|.+..+.=+.=++.-|+.|.+.||. +||+|- ++++.+.+
T Consensus 14 ki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~ 93 (467)
T COG2211 14 KIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF 93 (467)
T ss_pred HHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH
Confidence 34445566667777777888999999999999999999999999999999999999999983 366555 55666778
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
++.+.++..+.... +. ......++.-.+.+++......+..++.+++.++.++ |.
T Consensus 94 ~i~~~l~F~~p~~~-~~-------------------~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E-----R~ 148 (467)
T COG2211 94 AIVAVLLFITPDFS-MT-------------------GKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE-----RA 148 (467)
T ss_pred HHHHHHHHcCCCcc-cC-------------------cchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----HH
Confidence 88877777653211 11 2333445556678899999999999999999876542 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhc-------ccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQD-------NVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLL 263 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (573)
+..++-....++|..+...+.+.+.. ..||+..-.+..+...+..++.++..+|...+..+.++
T Consensus 149 ~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~--------- 219 (467)
T COG2211 149 SLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT--------- 219 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc---------
Confidence 99999888889997777666655543 23566555544444444444444433332211110000
Q ss_pred HHHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHH
Q 008231 264 LAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCIL 343 (573)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 343 (573)
+...+..+... ...+.|..+..+...++...
T Consensus 220 ---------------------------~~~~~~~~~~~----------------------~~~~Nrp~~~~l~~~l~~~~ 250 (467)
T COG2211 220 ---------------------------GVKLKLKDSFL----------------------LIFKNRPLLLLLLMNLLLFI 250 (467)
T ss_pred ---------------------------cccccHHHHHH----------------------HHHccchHHHHHHHHHHHHH
Confidence 00001100000 01112222222222233322
Q ss_pred HHHHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHH
Q 008231 344 FWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSV 423 (573)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~ 423 (573)
..........++.... ++.. .............+.++..++..++..++++| +.+..+.++..
T Consensus 251 ~~~i~~s~~~yy~~y~--lg~~----~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----------~~~~~~~~~~~ 313 (467)
T COG2211 251 AFNIRGSIMVYYVTYV--LGDP----ELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----------KLFLIGLLLLA 313 (467)
T ss_pred HHHHHhhhhheeEEEE--cCCh----HHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----------HHHHHHHHHHH
Confidence 2222222222232221 1111 21222223333334444455555554444433 33677788888
Q ss_pred HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccC-------chhHHHHHHHHHHHHHH
Q 008231 424 IAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGP-------ERMKSMSTGLFLSAISM 496 (573)
Q Consensus 424 i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p-------~~~rg~~~gi~~~~~~l 496 (573)
++.+.+.+.. ..+.++++...++.+++.+..++..++++.|... .|..|...|.+.++.-+
T Consensus 314 i~~~~~~f~~------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~ 381 (467)
T COG2211 314 VGYLLLYFTP------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL 381 (467)
T ss_pred HHHHHHHhhc------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH
Confidence 8877776652 2345566667788899999999999999998764 46789999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 008231 497 GMFVSSMLVSIVDKIT 512 (573)
Q Consensus 497 g~~ig~~~~~~i~~~~ 512 (573)
|.+++..+.|++....
T Consensus 382 g~ala~~~~g~~L~~~ 397 (467)
T COG2211 382 GLALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999988653
No 114
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=9.2e-16 Score=145.53 Aligned_cols=356 Identities=13% Similarity=0.171 Sum_probs=217.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
+...++..|...++| --..-+..+.+.+.+++.++..++.++|+....+.+.++|++.||..|-|..-++-+.+..+|-
T Consensus 46 lv~mc~lgfgsyfcy-d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~Gq 124 (459)
T KOG4686|consen 46 LVFMCLLGFGSYFCY-DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQ 124 (459)
T ss_pred HHHHHHhcccceeec-CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHH
Confidence 333333333333333 2334466788888999999999999999999999999999999997798877666666667777
Q ss_pred HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHH
Q 008231 115 GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFN 194 (573)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 194 (573)
++.+.-. +-+.++++..+|++.|+|.-.......++..-+|+.+| .+.++|
T Consensus 125 liFa~Gg-----------------------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfG 175 (459)
T KOG4686|consen 125 LIFAAGG-----------------------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFG 175 (459)
T ss_pred HHHHhch-----------------------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhh
Confidence 6666421 11578899999999999998888899999999999999 999999
Q ss_pred HHHHHHHhhhHHHHHHhhhhhcccchhH------HHHH----HHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHH
Q 008231 195 RFYFAISIGSLFAVIVLVYVQDNVGRGW------GYGI----SAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLL 264 (573)
Q Consensus 195 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~------~f~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (573)
++.....+|+..-..+.+++.+..+--. ...+ ....+...++.... .-.. ++... .
T Consensus 176 lqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~-lg~~------D~rAe-------r 241 (459)
T KOG4686|consen 176 LQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALS-LGLS------DDRAE-------R 241 (459)
T ss_pred HHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH-hhhh------hhHHH-------H
Confidence 9999999999988888888887654211 1110 01111111110000 0000 00000 0
Q ss_pred HHhccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHH
Q 008231 265 AWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILF 344 (573)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 344 (573)
.++..+.+..+.|+ . +.+.+.+.- ...+...+..+
T Consensus 242 ilh~e~g~~Ge~pk--------------------------------------L-----tdv~~f~pp--fw~~~iicv~y 276 (459)
T KOG4686|consen 242 ILHLEEGFLGEEPK--------------------------------------L-----TDVNTFYPP--FWVLVIICVLY 276 (459)
T ss_pred HHhhhcCcccCCcc--------------------------------------c-----ccccccCcc--HHHHHHHHHHH
Confidence 00000000000000 0 000000000 00112222333
Q ss_pred HHHhhcccc----hhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHH
Q 008231 345 WTVYSQMTT----FTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLI 420 (573)
Q Consensus 345 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ 420 (573)
+.....+.+ ++.... .++ ...++.+.+.--....+..|+++.+.|+.+++... +..+.+
T Consensus 277 yva~fPFi~lg~~fF~~rf-GlS------~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~w----------v~~a~~ 339 (459)
T KOG4686|consen 277 YVAWFPFITLGPMFFQKRF-GLS------AVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWW----------VASACI 339 (459)
T ss_pred HHHHHHHhhhhHHHHHHhh-CCC------hhhccchhhhhhhhhhhhhhhHHHhHhhhcceehh----------HHHHHH
Confidence 332222211 222211 111 22333344444455567788889998888777543 444544
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHH
Q 008231 421 FSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFV 500 (573)
Q Consensus 421 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~i 500 (573)
....+-..+.+. .+-....+.+.|+...+.....|..+..++|++..|++.|...+.+++|-.+
T Consensus 340 ~tl~~H~~l~Ft----------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~ 403 (459)
T KOG4686|consen 340 LTLLGHSGLFFT----------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAF 403 (459)
T ss_pred HHHHHhhhHHhh----------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhH
Confidence 444444433332 2222345677788888877888999999999999999999999999999999
Q ss_pred HHHHHHHHhhhh
Q 008231 501 SSMLVSIVDKIT 512 (573)
Q Consensus 501 g~~~~~~i~~~~ 512 (573)
.+.+++.+.+..
T Consensus 404 i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 404 IPIIAGFIADGD 415 (459)
T ss_pred HhhhhheeecCC
Confidence 999999987643
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.55 E-value=1.3e-11 Score=131.96 Aligned_cols=361 Identities=14% Similarity=0.063 Sum_probs=189.5
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHH-HHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHH
Q 008231 71 SATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIF-ASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQL 149 (573)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (573)
.++..++..+...+..|+.|-++|+. |+||-++.. ..+..+.+.++.+.. | .+.
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--~----------------------~~~ 126 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--P----------------------GQW 126 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--c----------------------chH
Confidence 35667888889999999999999997 666655544 455556666666642 1 233
Q ss_pred HHHHHHHHHHHhcCccccccccccccCCCCCCCch--------------------HHHhHHHHHHHHHHHHHhhhHHHHH
Q 008231 150 AMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK--------------------EEKAMIFFFNRFYFAISIGSLFAVI 209 (573)
Q Consensus 150 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~r~~~~~~~~~~~~ig~~~~~~ 209 (573)
+...+...+.-++.+.......+++.|..++++.. +...|++..+.-....++|+++.-+
T Consensus 127 ~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~ 206 (477)
T PF11700_consen 127 WLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALL 206 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHH
Confidence 33333334444556666677788888988877620 0001277777777778888887766
Q ss_pred Hhhhhhcc--------cchhHHHHHHHHHHHHHHHHHHhcCccccc--cCCCC-CchhHHHHHHHHHHhccCCCCCCCCC
Q 008231 210 VLVYVQDN--------VGRGWGYGISAGTMVVAAAILLIGTPWYRF--KKPRG-SPLTVIWRVLLLAWKKRSHPYPDHPS 278 (573)
Q Consensus 210 ~~~~l~~~--------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (573)
+.-.+... .+.|.++.+.++..++..+-+++..|+.+. ..+.. +......+.+...+|+
T Consensus 207 i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~---------- 276 (477)
T PF11700_consen 207 ISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKE---------- 276 (477)
T ss_pred HHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHH----------
Confidence 65443221 234667777666655554444444443322 11111 1112222222222211
Q ss_pred cchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhH-HHHHHHHHHHHHHhhcccchhhh
Q 008231 279 LLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKL-LPIWATCILFWTVYSQMTTFTVE 357 (573)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 357 (573)
..+.|.+... +..++..-..... ..+...+..
T Consensus 277 ----------------------------------------------~~~~~~~~~fLia~~l~~dg~~ti-~~~~~i~a~ 309 (477)
T PF11700_consen 277 ----------------------------------------------IRKLRQLFLFLIAYFLYSDGVNTI-ISFAGIYAT 309 (477)
T ss_pred ----------------------------------------------HHhChHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 1111111111 1111111111111 111111111
Q ss_pred hhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 358 QATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRR 437 (573)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~ 437 (573)
...+++.. ....+..+..+..+++..+.+++. +|... +..+.+..++++..+..+. +.......
T Consensus 310 ~~lg~s~~------~l~~~~l~~~i~a~~Ga~~~g~l~----~r~g~-----k~~~~l~~~l~~~~~i~~~-g~~G~~~~ 373 (477)
T PF11700_consen 310 EVLGMSTT------QLIVFGLVVQIVAIIGALLFGWLQ----DRFGP-----KTKRTLLISLILWIIIPLY-GLFGFWPS 373 (477)
T ss_pred HhcCcCHH------HHHHHHHHHHHHHHHHHHHHHHHH----HHhCC-----chhHHHHHHHHHHHHHHHH-HHHHhhhc
Confidence 11122211 111122233333444444555553 33321 2112234444333222221 11100000
Q ss_pred hhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcc
Q 008231 438 ETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWL 517 (573)
Q Consensus 438 ~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~ 517 (573)
.....+-+.+.+..++.|+..+...+..-++..++.|++..+...|++.+......++||++.+.+.+.++
T Consensus 374 -----~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg---- 444 (477)
T PF11700_consen 374 -----FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG---- 444 (477)
T ss_pred -----ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 00011223344455778999999999999999999999999999999999999999999999999987653
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHH
Q 008231 518 RSNLNKGKLNNFYWLLAVLGLLNFMVFL 545 (573)
Q Consensus 518 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 545 (573)
+....+..+.++.++++++++
T Consensus 445 -------~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 445 -------SQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred -------CchhHHHHHHHHHHHHHHHHh
Confidence 233456666666666665553
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.49 E-value=6.9e-13 Score=143.87 Aligned_cols=178 Identities=12% Similarity=0.086 Sum_probs=128.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
++.........++....+|++..++|.|+++.+|++..+.+.+.....++..++.+++|+++||+ |||+++.++.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~ 327 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 34444344444556678899999999999999999998888888888888999999999999998 99999888776544
Q ss_pred HHHHH-HHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 112 LVVGL-LTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 112 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
++... .....+ .+...+++++++.+++.+...+....++.|.+|++. |+
T Consensus 328 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg 377 (490)
T PRK10642 328 VLAIPAFILINS------------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RY 377 (490)
T ss_pred HHHHHHHHHHhC------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------ch
Confidence 43332 221110 134566778888887766666667788889999999 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHHh
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 240 (573)
++.++.+....+++.++|.+.+++.+..+ |+.++++..+..++..+..++
T Consensus 378 ~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 378 SALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 99998544456667889999999887654 676666555444444444333
No 117
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.47 E-value=1.8e-12 Score=136.59 Aligned_cols=171 Identities=13% Similarity=0.023 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
+..+...+.....++....++|.|+++++|++..+.+.+.+...+...++.+++|+++||+ |||+.+..+.....+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~ 297 (393)
T PRK15011 219 LLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYA 297 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHH
Confidence 3333333444445555667889999999999999999998888888888999999999998 999988777655554443
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
.+... .+...+++.+++.+++.+...+....+..|.+|+ + |+++.++
T Consensus 298 ~~~~~--------------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~ 344 (393)
T PRK15011 298 GMLMA--------------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTL 344 (393)
T ss_pred HHHHH--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHH
Confidence 33332 2445566677777776666656666777888774 4 8999999
Q ss_pred HHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 196 FYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
++...++|..++|.++|++.+.+||+.+|++..+..+++.+.++.
T Consensus 345 ~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 345 YTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 988899999999999999999899999998877776666655444
No 118
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.47 E-value=8.2e-13 Score=142.42 Aligned_cols=176 Identities=14% Similarity=0.054 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.+|.+.+..++....+++...++|.|+++++|+|..++++..+.+.++..++.+++|+++||+ |||+.+.+...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4678888888888888888889999999999999999999999999999999999999999998 999887665544444
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..+..+.. . .+.....+.+++.|++.............|.+|++. |+++
T Consensus 337 ~~~~~~~~~--~----------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a 386 (467)
T PRK09556 337 IFTLGVYQH--A----------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVA 386 (467)
T ss_pred HHHHHHHHh--c----------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHH
Confidence 332222211 0 133445566666775433322222356679999888 9999
Q ss_pred HHHHHHHHHh-hhHHHHHHhhhhhc------------ccchhHHHHHHHHHHHHHHHHHH
Q 008231 193 FNRFYFAISI-GSLFAVIVLVYVQD------------NVGRGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 193 ~~~~~~~~~i-g~~~~~~~~~~l~~------------~~g~~~~f~~~~~~~~~~~~~~~ 239 (573)
.|+.+...++ |..++|.+.|++.+ ..||+..|++..+..+++.+..+
T Consensus 387 ~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 387 NGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 9999999886 77999999999999 56899999887777766655444
No 119
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.47 E-value=9e-11 Score=119.36 Aligned_cols=347 Identities=13% Similarity=0.106 Sum_probs=200.5
Q ss_pred hhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccc-----hhHH-HHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 008231 61 VGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLG-----RYLT-VAIFASVTALVVGLLTSATSIPSMRPPQCDDY 134 (573)
Q Consensus 61 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (573)
..+++++..-.+..++...+... ..+..|+.||+. + ||-- ++.|..+.+.+..+..++.-.-...
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~------- 77 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAES------- 77 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccc-------
Confidence 45788888888888888777655 588889999997 6 5544 4455666666666666543111000
Q ss_pred cccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 008231 135 RRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l 214 (573)
..+...+.........++-++.|+|.+....+..++++|..|+++ |+++.++.+.+.-+|.+++.++.+.+
T Consensus 78 ---~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 78 ---GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred ---ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001111122234445566899999999999999999999998 99999999999999999999999988
Q ss_pred hcccchhHHHH----HHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhcccccCCC
Q 008231 215 QDNVGRGWGYG----ISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPH 290 (573)
Q Consensus 215 ~~~~g~~~~f~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (573)
.+.++-.-..- ...+..++..+..+-..++.++..+. ..
T Consensus 149 L~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~-------------------------------------~~ 191 (403)
T PF03209_consen 149 LDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAA-------------------------------------AE 191 (403)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccC-------------------------------------CC
Confidence 88776332221 22222222232222222222111100 00
Q ss_pred CCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccccccce
Q 008231 291 TEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFT 370 (573)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (573)
+++.++.+..... | .+ .+.++.+.. +++....+++-..-+.+ |- .+.++..
T Consensus 192 ~~~~~f~~a~~~~-------------~---~~---~~a~~f~~f--l~l~t~a~~~QD~iLEP-yg-------g~Vfgms 242 (403)
T PF03209_consen 192 RPRPPFREAWRQV-------------W---AS---PQARRFFVF--LFLGTLAFFMQDVILEP-YG-------GEVFGMS 242 (403)
T ss_pred CCCccHHHHHHHH-------------H---hC---CChhHHHHH--HHHHHHHHHhhHHHcCC-ch-------hHHcCCC
Confidence 0011111111000 0 00 001121111 22222222211111111 10 0111111
Q ss_pred e-cccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Q 008231 371 V-PSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISA 449 (573)
Q Consensus 371 ~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 449 (573)
+ ....++..-..+.++...+.+++..| |. ++.+....|.....+++........ ..+.
T Consensus 243 v~eTT~Lta~~~~G~L~G~~~~g~~l~~---~~-------~~~~~a~~G~~~~~~~f~lii~a~~-----------~~~~ 301 (403)
T PF03209_consen 243 VGETTRLTAFWGGGTLLGMLLAGFLLSR---RL-------GKKRTAALGCLLGALAFALIILAGP-----------LGSP 301 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC-------CchHHHHHHHHHHHHHHHHHHHHHh-----------cccc
Confidence 1 23345555556666666666666432 21 1122244555666666655554421 1235
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008231 450 FWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKIT 512 (573)
Q Consensus 450 ~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~ 512 (573)
+.+.+..++.|++.+.......+...+..+++..|..+|.+...+.++..++.++.+.+.|..
T Consensus 302 ~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 302 WLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778899999999999999999999999999999999999999999999999999988765
No 120
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.47 E-value=2e-11 Score=124.39 Aligned_cols=382 Identities=10% Similarity=0.001 Sum_probs=216.6
Q ss_pred HHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccc
Q 008231 56 LVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYR 135 (573)
Q Consensus 56 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (573)
+..|..+.+| |...+-|...+|++.+....+++-|+.|++ |-|...+++..+..+|..+=.++.. |...
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss~-p~v~-------- 135 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISSL-PFVP-------- 135 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhccC-cccc--------
Confidence 4456666777 777788999999999999999999999998 9999999999999999988877642 2111
Q ss_pred ccccccccchhhHHH--HHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhh
Q 008231 136 RKHHQCIEANGKQLA--MLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVY 213 (573)
Q Consensus 136 ~~~~~~~~~~~~~~~--~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~ 213 (573)
+.++ ..+.+..+.+..+-++......+...||++++ |..+..+-.++..+|..+|.++...
T Consensus 136 -----------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppi 198 (480)
T KOG2563|consen 136 -----------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPI 198 (480)
T ss_pred -----------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccce
Confidence 2333 67788888888888887777778888999999 9999888777777777777666655
Q ss_pred hhccc------chhH--HHHHHHHHHHHHHHHHHhcCccccccCCCCCchhHHHHHHHHHHhccCCCCCCCCCcchhccc
Q 008231 214 VQDNV------GRGW--GYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQN 285 (573)
Q Consensus 214 l~~~~------g~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (573)
+..+- .|.. .|....+...+.++...+.+++.++.||..+...
T Consensus 199 lV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~----------------------------- 249 (480)
T KOG2563|consen 199 LVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA----------------------------- 249 (480)
T ss_pred ecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh-----------------------------
Confidence 54332 3543 2332333333333333333333333332211100
Q ss_pred ccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhcccchhhhhhhccccc
Q 008231 286 AKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRK 365 (573)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (573)
.++.++... -....+++..++..+.......+++..+..+...+ ..+
T Consensus 250 -----~~~~~f~~s---------------------i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l-------~~s 296 (480)
T KOG2563|consen 250 -----LQDASFPKS---------------------IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL-------CPS 296 (480)
T ss_pred -----hhcCcHHHH---------------------HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc-------ccc
Confidence 000000000 00111122222222222222222333222222111 111
Q ss_pred cccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcccCC
Q 008231 366 IGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIA-MIVSAVIEQQRRETSVQKH 444 (573)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~-~i~~~~~~~~~~~~~~~~~ 444 (573)
+-.+...+.......+..++.+...+.+.||. |+. +.. +.+......++ +.+.... .
T Consensus 297 -gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~f-------k~~--~~v~~~~~~v~~~~l~~~t-----------~ 354 (480)
T KOG2563|consen 297 -GYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKF-------KLT--TLVLYLFALVGTLMLLTCT-----------L 354 (480)
T ss_pred -cCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhH-------HHH--HHHHHHHHHHHHHHHHHhh-----------c
Confidence 00023455556666666666666666666543 221 111 22222222223 2222111 1
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cCcccccccc
Q 008231 445 IQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITN-KHWLRSNLNK 523 (573)
Q Consensus 445 ~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~-~~w~~~~~~~ 523 (573)
.....+++.....+.|.+.....|...++..|..=+...|+..|+.+....+-+++-.++.+...+..+ .+|
T Consensus 355 ~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~------- 427 (480)
T KOG2563|consen 355 FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGN------- 427 (480)
T ss_pred cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCC-------
Confidence 122333445556777888888889999999999877889999999988777777776767666654321 111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhcchhhhcc
Q 008231 524 GKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNVQHR 558 (573)
Q Consensus 524 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 558 (573)
....-+.++..+++.+++..++.+.++++..+.
T Consensus 428 --~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 428 --TFPANIFLTVSALLGAILVAFFRPDYRRLRAEA 460 (480)
T ss_pred --CccchhHhHHHHHHHHHHHhhhhhhHHhHhhhh
Confidence 111123445556666666677767666555443
No 121
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.46 E-value=1.3e-12 Score=136.58 Aligned_cols=194 Identities=11% Similarity=0.040 Sum_probs=148.8
Q ss_pred CcccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccch-h
Q 008231 23 PVDRSKTGGWLAAGLILGTELSERICAMGISMNLVTYLVG-DLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGR-Y 100 (573)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r 100 (573)
.++...+.+||.+++.....++..+.++.+.+-.-+|+++ |.+-+.+..|+++++..++..+..++.|++..|. ++ |
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k 102 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVK 102 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcc
Confidence 3444557799999999999999999988887778889885 5778888999999999999999999999999997 65 8
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCC
Q 008231 101 LTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDT 180 (573)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~ 180 (573)
+-++.+.++.++|.++.......|. ...+.++++|++.|+|.+.. +..-+++++....
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~~---------------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~ 160 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVPN---------------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTV 160 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc---------------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCc
Confidence 8888899999999988844332231 26788999999999998886 4567899998887
Q ss_pred CCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh----ccc---------chhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 181 SDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ----DNV---------GRGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 181 ~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~----~~~---------g~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
++ |.++++....+..+|..+||.+...+. ..+ -+..+-|+.+++.++..+++.+..+|.
T Consensus 161 ~d------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 161 ED------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred cc------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 88 999999887777777777777664432 111 123455667776666666655555543
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.45 E-value=1.4e-12 Score=135.54 Aligned_cols=169 Identities=14% Similarity=0.099 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+.+....++..........+.++|. +++|.+..+.+.+.+.+.+...++.++.|+++||+ |||+.+.++..+.+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344444444444455445555666665 56899999999999999999999999999999998 9999999998888888
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
..++.+..+ .....+++..++.+++.+...+..+.++.|.+|+++ |+++.
T Consensus 284 ~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~ 333 (377)
T TIGR00890 284 MAAMLFIPM------------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANY 333 (377)
T ss_pred HHHHHHccc------------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHh
Confidence 777665421 112234455677788888877778889999999988 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVA 234 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 234 (573)
++.+...++|..++|.+.|++.+..||++.|.+.++..+++
T Consensus 334 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 334 GFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999998877665544
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.43 E-value=1.5e-12 Score=138.29 Aligned_cols=178 Identities=11% Similarity=-0.018 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--------chhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLS--------SAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFA 107 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 107 (573)
+..++..++..........+.+.|+.+ .|.+ ..+.+.+.++..+...++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 344444444444444555667778764 4443 46678999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 108 SVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
++..++..++......+ .+.+.+++.+++.|++.+...+....++.|.+|+++
T Consensus 289 ~~~~v~~~l~~~~~~~~----------------------~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~----- 341 (418)
T TIGR00889 289 VAWALRFGFFAYGDPEY----------------------FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI----- 341 (418)
T ss_pred HHHHHHHHHHHHcCcch----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-----
Confidence 98888776666531100 134567778899999998888888899999999888
Q ss_pred hHHHHHHHHH-HHHHhhhHHHHHHhhhhhcc------cchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 188 AMIFFFNRFY-FAISIGSLFAVIVLVYVQDN------VGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 188 ~r~~~~~~~~-~~~~ig~~~~~~~~~~l~~~------~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
|++++++.+ ...++|..+||+++|++.+. +||+.+|.+.++..+++.+.+.+..+
T Consensus 342 -~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 342 -RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999997 56789999999999999887 46999998877766666555544444
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.41 E-value=5.7e-12 Score=132.84 Aligned_cols=165 Identities=13% Similarity=-0.039 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhcc
Q 008231 43 LSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATS 122 (573)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 122 (573)
.+..++++....+++.|+.+ .|+ .+.++..+.+.++..++.++.|++.||+ |||+.+..+..+.+++..+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~- 300 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 34455666677788888764 465 3456667788888899999999999998 999999988888888777666542
Q ss_pred CCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHh
Q 008231 123 IPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISI 202 (573)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 202 (573)
+.+.+++.+++.|++.+...+.......|.+|++. |+++.++++...++
T Consensus 301 -------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~ 349 (399)
T PRK05122 301 -------------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDL 349 (399)
T ss_pred -------------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHH
Confidence 44566777888999998888877777888888877 99999999999999
Q ss_pred hhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 203 GSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 203 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
|..+++.+.|++.+..||++.|++.++..+++.+......+
T Consensus 350 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 350 SLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999899999999888777776665554444
No 125
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.41 E-value=6.3e-12 Score=131.03 Aligned_cols=166 Identities=15% Similarity=0.019 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHh
Q 008231 40 GTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTS 119 (573)
Q Consensus 40 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 119 (573)
...++.....+.....+|.|+++++|.++.+.+++.+...+...++.+++|+++||+ |||+++.++..+..++.....+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 206 VACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHH
Confidence 333343344444556788899999999999999988888777888889999999998 9999988877665554444433
Q ss_pred hccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHH
Q 008231 120 ATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFA 199 (573)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 199 (573)
. .+.+.+++.+.+.|++.+...+....+..|..|+ + ++++.++++..
T Consensus 285 ~--------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ 331 (375)
T TIGR00899 285 D--------------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNT 331 (375)
T ss_pred H--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHH
Confidence 2 2455666777888888888777777888888764 3 67999999999
Q ss_pred HHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008231 200 ISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 200 ~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 239 (573)
.++|..++|.+.|++.+..||+..|++.++..+++.+...
T Consensus 332 ~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 332 GRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988877766665543
No 126
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.39 E-value=1.9e-12 Score=135.30 Aligned_cols=168 Identities=21% Similarity=0.138 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..+......++....++....++|.|+++++|.+..+.+.+.....+...++.+++|+++||+ |||+.+..+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3466666777777788888889999999999999999999999999999999999999999998 999987765544433
Q ss_pred HH-HH-HHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 113 VV-GL-LTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 113 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.. .. ..+... .+.+.++...++.+++.+...+...+++.|.+|+++ |+
T Consensus 298 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~ 347 (394)
T TIGR00883 298 LAVPLLMALLDS------------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RY 347 (394)
T ss_pred HHHHHHHHHhcC------------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------ee
Confidence 32 12 222110 134455666777888888888889999999999988 99
Q ss_pred HHHHH-HHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHH
Q 008231 191 FFFNR-FYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTM 231 (573)
Q Consensus 191 ~~~~~-~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~ 231 (573)
++.++ ++.+..+|..++|.++|++.+..| |++.++..++..
T Consensus 348 ~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 348 TGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 99998 556677899999999999999888 887766555433
No 127
>PRK09952 shikimate transporter; Provisional
Probab=99.39 E-value=7.2e-12 Score=133.91 Aligned_cols=181 Identities=14% Similarity=-0.032 Sum_probs=130.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+++.........++..+.+|....+++.|+++.+|++......+.........++.++.|+++||+ |||+++..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 333333334455666778888899999999999999988766666666777788889999999998 9999988887665
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.++...+....... .....+++..++.+++.+...+...+++.|.+|++. |+
T Consensus 327 ~~~~~~~~~~~~~~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~ 378 (438)
T PRK09952 327 TLSAFPFFMALEAQ----------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RY 378 (438)
T ss_pred HHHHHHHHHHHHcC----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hH
Confidence 55443332211000 123344445566677777777778899999999987 99
Q ss_pred HHHHHH-HHHHHhhhHHHHHHhhhhhccc--chhHHHHHHHHHHHHHHHHHHh
Q 008231 191 FFFNRF-YFAISIGSLFAVIVLVYVQDNV--GRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 191 ~~~~~~-~~~~~ig~~~~~~~~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
.+.++. +.+..+|+.++|.+.+++.+.. +|..++.+.++..+++.+..+.
T Consensus 379 tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 379 SGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999984 4455689999999999998744 4788777776666666665444
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=1.2e-11 Score=126.94 Aligned_cols=172 Identities=26% Similarity=0.178 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-HHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYL-TVAIFASVTAL 112 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~~ 112 (573)
..+...+..++..........+.+.++.+.+|.+..+.+.+.+...+...++.++.|++.||+ |||+ .+..+..+..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 344455556666677777788888998888899999999999999999999999999999998 9999 99999998888
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+...+.... +.+.+++..++.|++.+...+...+++.|..|+++ |++.
T Consensus 255 ~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 302 (352)
T cd06174 255 GLLLLALAP--------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTA 302 (352)
T ss_pred HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHH
Confidence 888877652 45677788899999999999999999999999887 9999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAIL 238 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 238 (573)
+++.+...++|..++|.+.+++.+..||++.+.+.++..+++.+..
T Consensus 303 ~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 303 SGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998999999998887776665543
No 129
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.38 E-value=2.8e-12 Score=129.68 Aligned_cols=179 Identities=17% Similarity=0.068 Sum_probs=144.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhcc-chhHHHHHH-HH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKL-GRYLTVAIF-AS 108 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~~~~-~~ 108 (573)
+.|.+|.++++.++-.+.-|++..+.|.|+.+..|+|..++++..+.|-.++..+++++|+++||+. |||..+.+. ++
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 4468999999999999999999999999999999999999999999999999999999999999975 777665544 44
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
...++.+..-++.+ .+..+..+..+++|+..-+..-.+.....|..|++.
T Consensus 330 ~i~~~~~~~w~~~~------------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------ 379 (448)
T COG2271 330 LITASLVLYWLAPN------------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------ 379 (448)
T ss_pred HHHHHHHHHHcCCC------------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------
Confidence 44455555554421 245666667777777666655555566788889887
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008231 189 MIFFFNRFYFAISI-GSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 189 r~~~~~~~~~~~~i-g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 239 (573)
-|++.|+......+ |+.++....|++.|.+||...|.+..+.++++.+.+.
T Consensus 380 aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 380 AGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred ccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 99999998887777 9999999999999999999999877776666655443
No 130
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=9.6e-12 Score=131.04 Aligned_cols=171 Identities=13% Similarity=0.132 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.++...+..++....++++..++|.|+++.+|+|..+.+.+.+.+.++..++.+++|+++||+ +||+.+.....+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3556666666676677788889999999999999999999999999999999999999999998 999998887776666
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
...+..... +...+.+..++.|++.+...+...++..+..|+ + +++.
T Consensus 284 ~~~~~~~~~--------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~------~~~~ 330 (394)
T PRK03699 284 LMYLFVNTD--------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-A------SPKL 330 (394)
T ss_pred HHHHHHHcC--------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C------CHHH
Confidence 555554432 233444556677777777777777777776653 3 5566
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 237 (573)
.+......++|..++|.+.|++.+..|++..+++.++..+++.+.
T Consensus 331 ~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 331 VNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 788888889999999999999999999999988777766655443
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.37 E-value=1.1e-11 Score=131.03 Aligned_cols=170 Identities=19% Similarity=0.014 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
+.+....++....++....++|.|+.+ .|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+..+.....++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 334444445555666777888888874 799999999999999999999999999999998 999998887666666555
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
+..+.. +.+.+.+..++.|++.+...+...++..|.+|+++ |+++.++
T Consensus 301 ~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~ 348 (406)
T PRK11551 301 ALAAAP--------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGA 348 (406)
T ss_pred HHHhcC--------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhH
Confidence 554432 33445555667777777777888889999999988 9999999
Q ss_pred HHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHH
Q 008231 196 FYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 239 (573)
.+....+|..++|.+.|++.+..+ |...+++.....+++.+..+
T Consensus 349 ~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 349 AVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988654 55566655555444444333
No 132
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.36 E-value=3.2e-11 Score=127.00 Aligned_cols=178 Identities=13% Similarity=-0.089 Sum_probs=136.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..+.+.+..++...+++++..++|.|+.+ +|++..+.+...+.+.++..++.++.|+++||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345666666667778888899999999985 799999999999999999999999999999998 999999888877777
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCC-CCchHHHhHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDT-SDPKEEKAMIF 191 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~ 191 (573)
+..++.... .+...+. .++.|++.+...+.......+..++ ++ |++
T Consensus 283 ~~~~~~~~~-------------------------~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~ 329 (393)
T PRK09705 283 GFCGFIWLP-------------------------LQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAI------AGK 329 (393)
T ss_pred HHHHHHHcc-------------------------chHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHH------HHH
Confidence 665554321 1111121 2356777777777776666777753 34 899
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
.+++.+...+++..++|.+.|++.+..| |...|.+.++.+++..+......++.
T Consensus 330 ~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 330 LVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999886 77778877776666666655555543
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.36 E-value=2.2e-11 Score=127.81 Aligned_cols=169 Identities=7% Similarity=-0.102 Sum_probs=144.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
|.++..+...++....++...++.++|+++ +|.+..+.|.+.+...+...+..++.|++.||+ |+|+.+.++.++..+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 556777777777777888888899999974 899999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
...+++++ ++.+.+++...+.|+..+...+....++.+. |+++ |+++
T Consensus 283 ~~~~~~~~--------------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~ 329 (382)
T TIGR00902 283 RWAIIGAI--------------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKL 329 (382)
T ss_pred HHHHHHhH--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHH
Confidence 98888765 3677888899999999999999999999987 8777 8999
Q ss_pred HHHHH-HHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHH
Q 008231 193 FNRFY-FAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 193 ~~~~~-~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 237 (573)
.++++ .+..+|..+||.++|++.+.+|+ ..|++.++..++++++
T Consensus 330 q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 330 QALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99976 46789999999999999999986 5677666666555443
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.35 E-value=1.4e-11 Score=137.73 Aligned_cols=132 Identities=8% Similarity=-0.007 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHH
Q 008231 75 VTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYA 154 (573)
Q Consensus 75 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (573)
..+..++..++.+++|+++||+ |||+++++++++.+++.++++++. +...+++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~--------------------------s~~~ll~ 653 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN--------------------------SESAMIA 653 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc--------------------------cHHHHHH
Confidence 4455678889999999999998 999999999999999888887753 2345566
Q ss_pred HHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHH
Q 008231 155 ALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVA 234 (573)
Q Consensus 155 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 234 (573)
.+++.+++.++..+...++++|++|++. |++++|+.+....+|+++||++++.+.+. +...+|++.+++.+++
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~ 726 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACG 726 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 6777777777777888899999999988 99999999999999999999999988763 4566777776666665
Q ss_pred HHHHHh
Q 008231 235 AAILLI 240 (573)
Q Consensus 235 ~~~~~~ 240 (573)
.++..+
T Consensus 727 ~ll~~~ 732 (742)
T TIGR01299 727 GLLALK 732 (742)
T ss_pred HHHHHh
Confidence 554443
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.35 E-value=3.7e-12 Score=135.38 Aligned_cols=160 Identities=13% Similarity=0.055 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHhhh---cCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCC
Q 008231 48 CAMGISMNLVTYLVGD---LHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIP 124 (573)
Q Consensus 48 ~~~~~~~~l~~yl~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 124 (573)
.+.......+.|+.+. .+.+..+.+.+.++..+...++.+++|+++||+ |||+.+..+..+.+++..++.++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~--- 313 (420)
T PRK09528 238 FYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT--- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc---
Confidence 3333444566666643 366777889999999999999999999999998 999999998888888887777653
Q ss_pred CCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH-HHHHHHhh
Q 008231 125 SMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR-FYFAISIG 203 (573)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig 203 (573)
+.+.+++.+++.+++.+...+....++.|.+|++. |++..+. ++...++|
T Consensus 314 -----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg 364 (420)
T PRK09528 314 -----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLG 364 (420)
T ss_pred -----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHH
Confidence 45667778888888887777777788899999887 8877665 67788999
Q ss_pred hHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 204 SLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 204 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
.+++|.+.|++.+..||+.+|.+.++..++..++..+
T Consensus 365 ~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 365 AVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999877766555544443
No 136
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.34 E-value=1.2e-11 Score=130.56 Aligned_cols=165 Identities=15% Similarity=0.006 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCch---hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHh
Q 008231 43 LSERICAMGISMNLVTYLVGDLHLSSA---KSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTS 119 (573)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 119 (573)
+........+.+.++.|+.+..+.... ..+.+.++..+...++.++.|+++||+ |||+.+..+..+..++.++..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSF 307 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 333444445667778887765442221 234555666777788889999999998 9999999988877776666655
Q ss_pred hccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHH
Q 008231 120 ATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFA 199 (573)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 199 (573)
.. +.+.+++.+++.|++.+...+...+++.+..|++. |++.+++++..
T Consensus 308 ~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 355 (408)
T PRK09874 308 VQ--------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSF 355 (408)
T ss_pred hc--------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHH
Confidence 32 45567778889999999998888888888888887 99999999999
Q ss_pred HHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 200 ISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 200 ~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
.++|..+||.++|++.+..||++.|++.++..+++.+..++
T Consensus 356 ~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 356 RDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888877776665443
No 137
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.33 E-value=3.8e-11 Score=125.24 Aligned_cols=176 Identities=16% Similarity=-0.023 Sum_probs=129.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHH-HHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLT-VAIFASVTA 111 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-~~~~~~~~~ 111 (573)
+..+..+...++....++....+.+.|+++.+|.+..+.+++.+...+...++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4567777777888888888889999999999999999999999999999999999999999998 88861 111111111
Q ss_pred HH---HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 112 LV---VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 112 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
++ ..+..+..... .+.........+.+.+.+ ..+...+++.|.+|+++
T Consensus 294 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 344 (399)
T TIGR00893 294 IAGLVLSLLMFATNYV----------------------NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------ 344 (399)
T ss_pred HHHHHHHHHHHHhccc----------------------hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------
Confidence 11 11111111000 122333333333444444 67888999999999988
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHH
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAIL 238 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~ 238 (573)
|++++++.+...++|..++|.+.|++.+..| |++.|.+.++..+++.+..
T Consensus 345 ~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 345 AGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888 9999887777666655443
No 138
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.33 E-value=1.8e-10 Score=117.06 Aligned_cols=83 Identities=14% Similarity=0.023 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcc---------
Q 008231 147 KQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDN--------- 217 (573)
Q Consensus 147 ~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~--------- 217 (573)
.++..++++.++.|.|.+...+...+++++..++++ +.+.+++.+....+|..++|++++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 367789999999999999999999999999999888 99999999999999999999999987732
Q ss_pred -------cchhHHHHHHHHHHHHHH
Q 008231 218 -------VGRGWGYGISAGTMVVAA 235 (573)
Q Consensus 218 -------~g~~~~f~~~~~~~~~~~ 235 (573)
.+|+++|++.++..++..
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~ 106 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLA 106 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 368899885555443333
No 139
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.33 E-value=3.9e-12 Score=112.16 Aligned_cols=133 Identities=14% Similarity=0.126 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHH
Q 008231 75 VTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYA 154 (573)
Q Consensus 75 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (573)
.+.+.++..++.++.|+++||+ |||+.+..+..+..++..++.... +.+.+.+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~ 56 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS--------------------------NITVLII 56 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc--------------------------cHHHHHH
Confidence 3456677888999999999998 999999999888888877776642 5667788
Q ss_pred HHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHH
Q 008231 155 ALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVA 234 (573)
Q Consensus 155 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 234 (573)
.+++.|++.+...+...+++.|.+|+++ |+++.++.+...++|..++|.+.+++.+..+|++.|++..+..++.
T Consensus 57 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 57 ARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 8999999999988999999999999988 9999999999999999999999999999889999998877666655
Q ss_pred HHHHHh
Q 008231 235 AAILLI 240 (573)
Q Consensus 235 ~~~~~~ 240 (573)
.+...+
T Consensus 131 ~~~~~~ 136 (141)
T TIGR00880 131 FILLAF 136 (141)
T ss_pred HHHHhh
Confidence 554444
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=99.33 E-value=7.5e-11 Score=124.03 Aligned_cols=174 Identities=11% Similarity=-0.087 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
.+......++....+++...++++|+.+..|.|..+.+++.+.+.++..++.++.|+++||+ |||+.. .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 34444444555555666677888899888999999999999999999999999999999998 887654 4444444443
Q ss_pred HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHH
Q 008231 115 GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFN 194 (573)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 194 (573)
.+..... .+.+.+++..++.|++.+...+.....+.+..| ++ |+++++
T Consensus 285 ~~l~~~~-------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g 332 (390)
T PRK03545 285 LLLLPAA-------------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMA 332 (390)
T ss_pred HHHHHHh-------------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHH
Confidence 3332211 245566677778888887777777777777765 45 899999
Q ss_pred HHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcC
Q 008231 195 RFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGT 242 (573)
Q Consensus 195 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 242 (573)
+++...++|..+||+++|++.+.+|++..|++.+...+++.+......
T Consensus 333 ~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 333 LFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999988877777666554433
No 141
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.33 E-value=4.5e-11 Score=129.79 Aligned_cols=149 Identities=19% Similarity=0.130 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 008231 51 GISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQ 130 (573)
Q Consensus 51 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (573)
....++|.|+++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++..+..++.++......
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~-------- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG-------- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc--------
Confidence 4567889999989999999999999999999999999999999998 9999988887666655544333211
Q ss_pred CccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 008231 131 CDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIV 210 (573)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~ 210 (573)
.+.+.+.+..++.+.......+..++++.|.+|+++ |++++++++...++|..+||.+
T Consensus 364 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l 421 (496)
T PRK03893 364 ----------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPIL 421 (496)
T ss_pred ----------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHH
Confidence 123333344444333333345667778899999888 9999999999999999999999
Q ss_pred hhhhhcccchhHHHHHHHHH
Q 008231 211 LVYVQDNVGRGWGYGISAGT 230 (573)
Q Consensus 211 ~~~l~~~~g~~~~f~~~~~~ 230 (573)
+|++.+.+||+..+.+.+..
T Consensus 422 ~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 422 GALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHHhccCChHHHHHHHHHH
Confidence 99999999999887655443
No 142
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.32 E-value=3.8e-11 Score=128.21 Aligned_cols=178 Identities=16% Similarity=0.000 Sum_probs=121.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhcc--chhHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKL--GRYLTVAIFASVT 110 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~--Grr~~~~~~~~~~ 110 (573)
+.++.+.+..++....++++..++|.|+.+++|++..+.+...+.+.++..++.+++|+++||+. +||+.........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 34666666666777777788889999999899999999999999999999999999999999972 2233222221111
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.+.......... .+.....+..+..|++............+|.+|++. |+
T Consensus 323 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g 372 (434)
T PRK11663 323 LLSVGSLWLMPF------------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AG 372 (434)
T ss_pred HHHHHHHHHccc------------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HH
Confidence 111111111110 011222222333343322222223456678888777 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
++.|+.+...++|..++|.+.|++.+..||+..|++.++..+++.+..+.
T Consensus 373 ~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 373 AATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998887776666554443
No 143
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.32 E-value=1.6e-11 Score=130.35 Aligned_cols=163 Identities=12% Similarity=-0.033 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008231 49 AMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRP 128 (573)
Q Consensus 49 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (573)
..++..++|.|+++.+|.+..+.+++.+.+.++..++.++.|++.||. ++++.+..+..+.+++.++..+.
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 345667788999988999999999999999999999999999999997 88888888887777777666553
Q ss_pred CCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHH
Q 008231 129 PQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAV 208 (573)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~ 208 (573)
.+.....++.++.|++.+...+...+++.|..|++. |++++++++...++|..+||
T Consensus 310 ------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~ 365 (417)
T PRK10489 310 ------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGA 365 (417)
T ss_pred ------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHH
Confidence 244556677778888888777777788999999887 99999999999999999999
Q ss_pred HHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 008231 209 IVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPW 244 (573)
Q Consensus 209 ~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 244 (573)
.+.|++.+.+|++..+.+.++..++..++.....++
T Consensus 366 ~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 366 ALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999998888876666555444444443343
No 144
>PRK12382 putative transporter; Provisional
Probab=99.31 E-value=3.2e-11 Score=126.84 Aligned_cols=162 Identities=13% Similarity=0.019 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhcc
Q 008231 43 LSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATS 122 (573)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 122 (573)
++....+..+..+.+.|+++ .|++. .+.....+.++..++.++.|++.||+ ||||.+..+..+.+++..+..+..
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~- 300 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP- 300 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc-
Confidence 34445555666777888764 46553 45666777788889999999999998 999999999888888877766542
Q ss_pred CCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHh
Q 008231 123 IPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISI 202 (573)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 202 (573)
+.+.+++..++.|++.+...+...+.+.|.+|+++ |+++.++++...++
T Consensus 301 -------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~ 349 (392)
T PRK12382 301 -------------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDI 349 (392)
T ss_pred -------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHH
Confidence 44566777888999988888888888889888887 99999999999999
Q ss_pred hhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 203 GSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 203 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
|..++|.+.|++.+..||++.|.+.++..+++.+..+.
T Consensus 350 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 350 AYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888777766655443
No 145
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.31 E-value=2.7e-11 Score=130.04 Aligned_cols=177 Identities=15% Similarity=0.040 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhcc-chhHHH-HHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKL-GRYLTV-AIFASVT 110 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~-~~~~~~~ 110 (573)
+.+|...+..++....+++...++|.|+++..|++..+++.+...+.++..++.+++|+++||+. |||+.. .....+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 45777777777777788888899999999999999999999999999999999999999999971 334332 2222333
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.++.++..+... .+.....+..++.|.+..........+..|.+|++. |+
T Consensus 333 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g 382 (452)
T PRK11273 333 TIATIVYWLNPA------------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AG 382 (452)
T ss_pred HHHHHHHHHhcc------------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hh
Confidence 333333222110 122233334444444322222223345679999988 99
Q ss_pred HHHHHHHHHHHhhhHH-HHHHhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008231 191 FFFNRFYFAISIGSLF-AVIVLVYVQDNVGRGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~-~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 239 (573)
++.|+.+...++|+.+ +|.+.|++.+..||+..|++.++.++++.+...
T Consensus 383 ~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 383 TAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9999999888888654 799999999999999999877776666655433
No 146
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.29 E-value=8.7e-11 Score=123.17 Aligned_cols=157 Identities=16% Similarity=0.144 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccC
Q 008231 44 SERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSI 123 (573)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 123 (573)
.....+.....++|.|+++ .|.+..+.+++.+...+...++.++.|+++||+ |+|+++..+..+..++..... .
T Consensus 211 ~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~--- 284 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S--- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h---
Confidence 3333444455678888875 699999999999999999999999999999998 999999888777776654432 1
Q ss_pred CCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhh
Q 008231 124 PSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIG 203 (573)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 203 (573)
. ......+++.|++.+...|...+.+.|..|+++ ++...+.++...++|
T Consensus 285 ------------------------~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG 333 (381)
T PRK03633 285 ------------------------Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVG 333 (381)
T ss_pred ------------------------h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHH
Confidence 0 123345566777666777888888889888766 777888888889999
Q ss_pred hHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHH
Q 008231 204 SLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 204 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 237 (573)
..+||.++|++.+.+||++.|.+.+...++..+.
T Consensus 334 ~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 334 SLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998877666554433
No 147
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=6.3e-10 Score=113.01 Aligned_cols=362 Identities=15% Similarity=0.059 Sum_probs=194.4
Q ss_pred HHHHHHHhhhcCC---Cc----hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-HHHHHHHHHHHHHHHHHhhccCCC
Q 008231 54 MNLVTYLVGDLHL---SS----AKSATIVTNFMGTLNLLGLLGGFLADAKLGRYL-TVAIFASVTALVVGLLTSATSIPS 125 (573)
Q Consensus 54 ~~l~~yl~~~~~~---s~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~~~~~~~~~~~~~~~ 125 (573)
.+.|+|+++..+- +. +-.+...++..+...+..|+-|.++|+. |+|| .+.....+..+.+.++.++.+
T Consensus 36 ~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~--- 111 (438)
T COG2270 36 FIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP--- 111 (438)
T ss_pred ehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC---
Confidence 4567788766544 33 3456667788888999999999999998 6555 455556666677777776531
Q ss_pred CCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhH
Q 008231 126 MRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSL 205 (573)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 205 (573)
+...+...+...+..++.........+++.|..++++ .++..+.-+....+|+.
T Consensus 112 --------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~ 165 (438)
T COG2270 112 --------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSV 165 (438)
T ss_pred --------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccch
Confidence 0245556666677888888888888999999999887 66666666666677776
Q ss_pred HHHHHh--hhh-h---------------cccchhHHHHHHHHHHHHHHHHHHhcCccccccC-CCCCchhHHHHHHHHHH
Q 008231 206 FAVIVL--VYV-Q---------------DNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKK-PRGSPLTVIWRVLLLAW 266 (573)
Q Consensus 206 ~~~~~~--~~l-~---------------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 266 (573)
+.-++. ..+ . +...-|.++.+.++..++..+=.+...++..+.. +....+..-.+.+...+
T Consensus 166 i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~ 245 (438)
T COG2270 166 ILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTF 245 (438)
T ss_pred HHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHH
Confidence 665543 111 1 1112345555555544433332222222211110 11111111111111111
Q ss_pred hccCCCCCCCCCcchhcccccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHh-HHHHHHHHHHHH
Q 008231 267 KKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLK-LLPIWATCILFW 345 (573)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~ 345 (573)
|+ ...++.+.. ++..++..-...
T Consensus 246 k~--------------------------------------------------------i~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 246 KE--------------------------------------------------------IRGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred HH--------------------------------------------------------HhcccchHHHHHHHHHHHhhHH
Confidence 10 011111111 111111111111
Q ss_pred HHhhcccchhhhhhhccccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHH
Q 008231 346 TVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIA 425 (573)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~ 425 (573)
....... .+-....+++ ..+...+.....+..+++..+.+++-+|+..| +.+..+++...+.
T Consensus 270 til~~~~-~fg~~~~gls------~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----------~vl~~~lvi~~~~ 331 (438)
T COG2270 270 TILAMGG-VFGAADLGLS------STELLLIGIALSVVAALGAIIAGFLDERFGSK-----------PVLMIGLVILSIA 331 (438)
T ss_pred HHHHHHH-HHHHHHcCcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----------eeehHHHHHHHHH
Confidence 1110000 0000000111 00111222233334444445555554444333 2256666665555
Q ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 426 MIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLV 505 (573)
Q Consensus 426 ~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~ 505 (573)
.+.....+ ....+ .+...+.|...+......=+|..+.+|++..+...|++++....+.++||++.
T Consensus 332 ~~~~~~~~-----------~~~~f---~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 332 ALYLIFLE-----------GELDF---WILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHcc-----------ccHHH---HHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 44443331 11222 33346677888888888888999999999999999999999999999999999
Q ss_pred HHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHH
Q 008231 506 SIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVF 544 (573)
Q Consensus 506 ~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 544 (573)
+.+-+.++ +....+..+.++..++.+++
T Consensus 398 ~v~t~iTg-----------~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 398 AVITQITG-----------SSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHhc-----------chhhHHHHHHHHHHhhHhhE
Confidence 99987653 22234444555555554443
No 148
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.28 E-value=7.8e-10 Score=117.60 Aligned_cols=163 Identities=17% Similarity=0.087 Sum_probs=118.6
Q ss_pred HHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc--cc--hhHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 008231 55 NLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK--LG--RYLTVAIFASVTALVVGLLTSATSIPSMRPPQ 130 (573)
Q Consensus 55 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (573)
....|+++++|+++.+.....+...+...+ .++.|.++|-+ .| ||+-++++.++.+++...++......
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~------ 83 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE------ 83 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc------
Confidence 345688999999999998877777666554 46779999995 23 44455566666655555555432111
Q ss_pred CccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 008231 131 CDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIV 210 (573)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~ 210 (573)
.+.....+..++..+|.+.......+++.|...++..+ |+...+..+....+|++++..+
T Consensus 84 ----------------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l 143 (433)
T PF03092_consen 84 ----------------SSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLL 143 (433)
T ss_pred ----------------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHh
Confidence 23345556667788999999999999999988665432 7888888888999999999999
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 008231 211 LVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPW 244 (573)
Q Consensus 211 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 244 (573)
+|.+.+..+++..|.+.++..++..+..++..++
T Consensus 144 ~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 144 SGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999988877666655544444443
No 149
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.27 E-value=5.5e-11 Score=127.71 Aligned_cols=171 Identities=12% Similarity=-0.022 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc-cchhHHHHHHH--HH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK-LGRYLTVAIFA--SV 109 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Grr~~~~~~~--~~ 109 (573)
+.++..+...++..++++....+++.|++ ++|++..+.+++.+...++..++.+++|+++||. .++|+...++. .+
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 45666677777777888888888999986 5799999999999999999999999999999983 13444443333 33
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
.+++.+++.+. ++.+.+++.+++.|++.+...+...+++.|.+|+++ +
T Consensus 320 ~~l~~ll~~~~--------------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~ 367 (455)
T TIGR00892 320 NGLTHLLCALA--------------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------F 367 (455)
T ss_pred HHHHHHHHHHh--------------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------H
Confidence 33333344333 255677788899999999998999999999999887 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhccc-chhHHHHHHHHHHHHHHH
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQDNV-GRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~ 236 (573)
++.+++++...++|..+||.++|++.+.. +|++.|++.++..+++.+
T Consensus 368 g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 368 SSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999877 499999888776655544
No 150
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.27 E-value=6.1e-11 Score=124.68 Aligned_cols=159 Identities=21% Similarity=0.117 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
..+.....+.....+....++|.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++..+..+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 319 (405)
T TIGR00891 241 VYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLII 319 (405)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHH
Confidence 3333444444555556777889999999999999999999999999999999999999998 999998888765533322
Q ss_pred HHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 116 LLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
...... .+.+.+.++.++.+.+.+...+...+++.|.+|+++ |++++|+
T Consensus 320 ~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~ 368 (405)
T TIGR00891 320 PVFAIG-------------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGF 368 (405)
T ss_pred HHHHhC-------------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhH
Confidence 221111 133455555566666666667778889999999988 9999999
Q ss_pred HHHHHHhhhHHHHHHhhhhhcccc-hhHHHHH
Q 008231 196 FYFAISIGSLFAVIVLVYVQDNVG-RGWGYGI 226 (573)
Q Consensus 196 ~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~ 226 (573)
.+...++|..++|++.|++.+..| |+..+..
T Consensus 369 ~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 369 TYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 999999999999999999999888 8776654
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=1.5e-10 Score=122.30 Aligned_cols=177 Identities=15% Similarity=0.048 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHH-HHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVA-IFASVTA 111 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~ 111 (573)
|.++...+..++....+++...++|.|++ ++|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+. .+....+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 45566667777777888888899998885 5899999999999999999999999999999998 9888764 3333333
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++...+....... .++.+..++..++.|++.+...+. ...+.|..| ++ |++
T Consensus 300 ~~~~~l~~~~~~~---------------------~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g~ 350 (402)
T TIGR00897 300 IFTLALYYIPQHF---------------------GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KGA 350 (402)
T ss_pred HHHHHHHHHHHcc---------------------CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hHH
Confidence 3332322211000 013445556677777777765443 455666544 46 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
++|+.+...++|..++|.+.+++.+..||..+|++.++..+++.+...+
T Consensus 351 ~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 351 AMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888776666554433
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=3.2e-10 Score=116.10 Aligned_cols=179 Identities=16% Similarity=0.038 Sum_probs=144.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
+.+.++......++...++|+..+++.+++++..|+|....+++.-.|.++..++..++|+++|| +.|+++.....+.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL 286 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence 33567888888888889999999999999999999999999999999999999999999999999 6888888887777
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
++....+.+.. .+....++..++.|+...........-+++. -++. +.
T Consensus 287 a~~~l~l~~~~-------------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~-~p~~------~~ 334 (394)
T COG2814 287 ALALLALTFTG-------------------------ASPALALALLFLWGFAFSPALQGLQTRLARL-APDA------AD 334 (394)
T ss_pred HHHHHHHHHhc-------------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhccc-CCCc------hH
Confidence 77776666643 2444555555666665555544444555552 2445 89
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
.+.+++....|+|..+|..++|.+.+.+|+....++.++..++++++.+...+
T Consensus 335 ~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 335 LAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999888887776555433
No 153
>PRK15075 citrate-proton symporter; Provisional
Probab=99.23 E-value=1.1e-10 Score=124.76 Aligned_cols=153 Identities=17% Similarity=0.085 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH-HH
Q 008231 39 LGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG-LL 117 (573)
Q Consensus 39 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~-~~ 117 (573)
+...++....++.+..++|.|+++.+|++..+.++....+.++..++.+++|+++||+ |||+++.++..+.++... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444455667778888999999988999999999888888899999999999999998 999988776544333221 11
Q ss_pred HhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHH
Q 008231 118 TSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFY 197 (573)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 197 (573)
...... .+.....+..++.+++.+...+....++.|.+|++. |+.++++.+
T Consensus 323 ~~~~~~-----------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~ 373 (434)
T PRK15075 323 SWLVAA-----------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAY 373 (434)
T ss_pred HHHHcC-----------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHH
Confidence 111100 122223333444555566666666678899999998 999999854
Q ss_pred H-HHHhhhHHHHHHhhhhhcccchh
Q 008231 198 F-AISIGSLFAVIVLVYVQDNVGRG 221 (573)
Q Consensus 198 ~-~~~ig~~~~~~~~~~l~~~~g~~ 221 (573)
. +..+++.++|.+.+++.+..|+.
T Consensus 374 ~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 374 SLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 4 44456788999999999988854
No 154
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.22 E-value=1.9e-10 Score=122.73 Aligned_cols=175 Identities=17% Similarity=0.104 Sum_probs=112.3
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 35 AGLILGTEL-SERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 35 ~~~~~~~~~-~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+......+ .....+|++..++|.|+.+++|++..+.+...++..+...++.++.|+++||+ |||+.+.++..+.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 322 (432)
T PRK10406 244 AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALF 322 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344433333 34677888999999999999999999999988888888889999999999998 9999887765544333
Q ss_pred HHHHHh-hccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 114 VGLLTS-ATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 114 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
...... ... . .+....+....+...+.+...+....+.+|.+|++. |+++
T Consensus 323 ~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~ 373 (432)
T PRK10406 323 TVPILSALQN-V----------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALG 373 (432)
T ss_pred HHHHHHHHHc-C----------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchh
Confidence 222211 110 0 011111111122222223333456678899999999 9999
Q ss_pred HHHHHHHHH-hhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHHh
Q 008231 193 FNRFYFAIS-IGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 193 ~~~~~~~~~-ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 240 (573)
+|+.+...+ +++...|.+.+++. ..| |...+++.++..+++.+..++
T Consensus 374 ~g~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 374 VGLSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred hhHHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 999776544 44555888888664 445 555565555555555544443
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.22 E-value=3.4e-10 Score=118.76 Aligned_cols=166 Identities=10% Similarity=-0.076 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
|.++..+...++....+....++++.|++ +.|.+..+.+.+.+...+...+..++.|++.||+ |+|+.+..+..+.++
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 45566666666666666667788888986 5899999999999988888899999999999998 999999999888888
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..+++.+ ++.+.+++..++.|++.+...+....++.+. ++++ +++.
T Consensus 283 ~~~~~~~~--------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~ 329 (382)
T PRK11128 283 RWGLMGST--------------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRL 329 (382)
T ss_pred HHHHHHhh--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHH
Confidence 77666654 3567778888999999888888888887775 5444 7788
Q ss_pred HHHHH-HHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHH
Q 008231 193 FNRFY-FAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVA 234 (573)
Q Consensus 193 ~~~~~-~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 234 (573)
.+.++ ....+|..+||.++|++.+.+|+ ..|+..++..+++
T Consensus 330 ~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 330 QALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 88765 55678889999999999999887 4565555544443
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.21 E-value=3.1e-10 Score=121.77 Aligned_cols=171 Identities=14% Similarity=0.000 Sum_probs=120.5
Q ss_pred HHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 008231 51 GISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQ 130 (573)
Q Consensus 51 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (573)
.+..+. +++.+++|++..+.++......+...++.+++|+++||+ |||+.+.++..+.+++..++.+.......
T Consensus 302 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 375 (481)
T TIGR00879 302 AIMYYS-PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVT---- 375 (481)
T ss_pred ehHHHH-HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccC----
Confidence 333344 445567899998888999999999999999999999998 99999999988877777666632100000
Q ss_pred CccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 008231 131 CDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIV 210 (573)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~ 210 (573)
+. +.......+....+..+.......+....+..|.+|+++ |+++.++.+...++|.+++|.+
T Consensus 376 -------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~ 438 (481)
T TIGR00879 376 -------GS----SKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFL 438 (481)
T ss_pred -------Cc----ccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000012222222222222223334666777899999888 9999999999999999999999
Q ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 008231 211 LVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPW 244 (573)
Q Consensus 211 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 244 (573)
.+++.+..||++.|++.+++++++.+...+..++
T Consensus 439 ~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 439 FPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHHHhcCccceehhHHHHHHHHHHHHheeccc
Confidence 9999988899999988777766666655554443
No 157
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.21 E-value=9.5e-09 Score=109.01 Aligned_cols=341 Identities=15% Similarity=0.079 Sum_probs=199.0
Q ss_pred HHHHHHHhhhcCCCch-hhhHHHHHH----HHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008231 54 MNLVTYLVGDLHLSSA-KSATIVTNF----MGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRP 128 (573)
Q Consensus 54 ~~l~~yl~~~~~~s~~-~~~~~~~~~----~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (573)
.....+.....+.+.. ..+...... .+...+..+..|.++||| |||..+........+......+.
T Consensus 42 ~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~-------- 112 (463)
T KOG2816|consen 42 TNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQ-------- 112 (463)
T ss_pred hhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHH--------
Confidence 4445555555544433 223333333 567788899999999999 99999999998888887777763
Q ss_pred CCCccccccccccccchhhHHHHHHHHHHHHHhc--CccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHH
Q 008231 129 PQCDDYRRKHHQCIEANGKQLAMLYAALYTIALG--GGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLF 206 (573)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g--~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 206 (573)
. +.+++ +.++. .+...+...++++|....++ |...+++.+.....+..+
T Consensus 113 -------------------~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~~gll~~~~~~~~~~ 163 (463)
T KOG2816|consen 113 -------------------G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSSIGLLSGTFGAGLVI 163 (463)
T ss_pred -------------------H-HHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHHHHHHHHHHHHHHhH
Confidence 2 22222 33333 23455777889999999887 999999999999999999
Q ss_pred HHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccCCCCC-chhHHHHHHHHHHhccCCCCCCCCCcchhccc
Q 008231 207 AVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGS-PLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQN 285 (573)
Q Consensus 207 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (573)
+|.+++.+....|.-.+|.++.+..++..+...+..|+...++.++. +.. +..
T Consensus 164 ~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~-----------------~~~--------- 217 (463)
T KOG2816|consen 164 GPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLR-----------------ELT--------- 217 (463)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccc-----------------ccC---------
Confidence 99999999999999999999998888887776666666544332210 000 000
Q ss_pred ccCCCCCccchhhhhhhhhhhhhhccccCCcccccchhhHHHHHHHHhHHHHHHHHHHHHHHhhccc---chhhhhhhcc
Q 008231 286 AKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMT---TFTVEQATFM 362 (573)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 362 (573)
.++... . +...+++.... ....|..+.+... ............. .++.......
T Consensus 218 ----~~~~~~-~--------------~~~~~~~~~~~--~~~~r~~l~l~l~--~~~~~~~~~~~~~~~~~~yl~~~f~w 274 (463)
T KOG2816|consen 218 ----PGSLDS-S--------------HVADAFQSLTK--VGPDRLLLLLLLV--AFLSSLPEAGGASDVLLLYLKAKFGW 274 (463)
T ss_pred ----CCcccc-h--------------hhhhhhhhhcc--cCCCccchHHHHH--HHHHHHHHhcCceeEEEEEEeeecCc
Confidence 000000 0 00001100000 1111222221111 1111111111111 1111111111
Q ss_pred ccccccceecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008231 363 NRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQ 442 (573)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~ 442 (573)
+... +..-....+....+..++..|+..... ..| +.+..|+..-.+.....++..
T Consensus 275 ~~~~--~s~~~~~~~~~~~i~~l~~~~~l~~~l---~~~-----------~~i~lGl~~~~~~~~~~af~~--------- 329 (463)
T KOG2816|consen 275 NKKE--FSDLLSLVSILGIISQLLLLPLLSSIL---GEK-----------RLISLGLLSEFLQLLLFAFAT--------- 329 (463)
T ss_pred CHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH---hhh-----------hHhhHHHHHHHHHHHHHHHhc---------
Confidence 1110 000011112223333444443332221 111 137888888888888888762
Q ss_pred CCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008231 443 KHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKIT 512 (573)
Q Consensus 443 ~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~ 512 (573)
..| +...............|...+.++....++.+|+.+++......+.+.+++.+.+.+...+
T Consensus 330 -----~~w-~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 330 -----ETW-MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred -----cch-hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 222 2223334444455667888899999999999999999999999999999999999887654
No 158
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.21 E-value=3.4e-10 Score=122.67 Aligned_cols=176 Identities=16% Similarity=0.087 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHH-HHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVT-NFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
+......++.....+....+.++|+.+++|+|..+.+++.. ...++..++.+++|+++||+ |||+.+.++..+.+++.
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33333334445555566677888988889999999999875 55678999999999999998 99988877666555544
Q ss_pred HHHHh-hccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 115 GLLTS-ATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 115 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.+... +.. . .+...+.+..++..++.+...+...++..+..+++. +++.+
T Consensus 304 l~~~~l~~~-~----------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~ 354 (491)
T PRK11010 304 AGYWLLSIT-D----------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQF 354 (491)
T ss_pred HHHHHHHhc-c----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHH
Confidence 33221 110 0 123333444455444445444556788888888888 88899
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhc
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIG 241 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 241 (573)
++.+...++|..+++.+.|++.+..||+..|.+.+++.+++.+.....
T Consensus 355 gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 355 ALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988888777776655443
No 159
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.21 E-value=8.2e-11 Score=122.25 Aligned_cols=162 Identities=15% Similarity=0.043 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH-H-H
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS-V-T 110 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~-~-~ 110 (573)
+.++.+.+..++.....+++..+.+.|+.+.+|++..+.+.+.+.+.+...++.++.|+++||+.+||+....... . .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4566677777777777778888999999999999999999999999999999999999999985234433222211 1 1
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.++....... + ..+....++..++.|.......+....+..|.+|++. |+
T Consensus 296 ~~~~~~~~~~---~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g 345 (379)
T TIGR00881 296 IVSLLVYWLN---P---------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AG 345 (379)
T ss_pred HHHHHHHhcC---c---------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hH
Confidence 1221221111 0 0133344455556666555555556678899999988 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGY 224 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f 224 (573)
++.++++...++|..++|.+.|.+.+.+||++.|
T Consensus 346 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 346 TAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 9999999999999999999999999999998754
No 160
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.20 E-value=5.3e-10 Score=119.66 Aligned_cols=183 Identities=16% Similarity=0.051 Sum_probs=150.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchh--HHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRY--LTVAIFAS 108 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~ 108 (573)
+.|.+...+++.++-+-+..++......|.++++|++..+...+..+.++...++.+++|++.||+ |.| +++.+++.
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 446777788888888888889999999999999999999999999999999999999999999998 998 88888877
Q ss_pred HHHHHHHHHHh--hccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHH
Q 008231 109 VTALVVGLLTS--ATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEE 186 (573)
Q Consensus 109 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (573)
++.+..+...+ ..+.. ...+.+.+++.-++.|+..|..++..-++.+++.|+++
T Consensus 358 ~~~~i~~~g~~G~~~~~~--------------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~---- 413 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFF--------------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR---- 413 (477)
T ss_pred HHHHHHHHHHHHhhhccc--------------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch----
Confidence 76443322222 11100 00356678888889999999999999999999999988
Q ss_pred HhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHHh
Q 008231 187 KAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 187 ~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 240 (573)
.+..||++....-..+.+||++.|.+.+..| -|+.+....++.+++++++..
T Consensus 414 --e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 414 --EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999998887 788887666666666666544
No 161
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=6e-10 Score=113.11 Aligned_cols=181 Identities=19% Similarity=0.086 Sum_probs=143.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.+..|.++..-+...-++-++..++|.|++++++++..+++.+...+.+...+..+.+|+|+||+ |.+|++.+.....+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 45788888888888888889999999999999999999999999999999999999999999999 88888888888888
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++..+..+..+.. . + +.+....++..+..++..|.-+.....++..++|++ -+.
T Consensus 296 ~~~~~l~~~~~~~--~-----------~------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~ 349 (417)
T COG2223 296 LAAALLSLFLTGF--G-----------H------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGA 349 (417)
T ss_pred HHHHHHHcccccc--c-----------c------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhH
Confidence 8777776642100 0 0 123334444444455555555666778888888863 789
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHH
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 239 (573)
+.|+.....++|++.-|...+...+..| +...|++.....+++.+..+
T Consensus 350 v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 350 VTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988887 88888887777766665433
No 162
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.16 E-value=7.4e-10 Score=112.63 Aligned_cols=163 Identities=10% Similarity=0.003 Sum_probs=123.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGD--LHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
.+..+...+..++-...-.++..+++.|+.+. +|+++.+.+...+.+..+..++.++++++.||+ |+||++.++..+
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 34455555554544445557788899999853 799999999999999999999999999999998 999998888877
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 110 TALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
.+++..+..... ... ...+.++.|++.+...|...+...+.+|++.
T Consensus 218 ~~~~~~l~~~~~--------------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~------- 263 (310)
T TIGR01272 218 AVLLSIGAALTH--------------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT------- 263 (310)
T ss_pred HHHHHHHHHHcC--------------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------
Confidence 777665554421 111 1234557899999999999999988887642
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHH
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGT 230 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~ 230 (573)
+.+.++. ....+|+.++|.+.|.+.|..|.+.+|++..++
T Consensus 264 ~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 264 SQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3344454 456799999999999999999998888865543
No 163
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.16 E-value=1.9e-08 Score=101.00 Aligned_cols=153 Identities=18% Similarity=0.135 Sum_probs=109.9
Q ss_pred hhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccccccccc
Q 008231 62 GDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQC 141 (573)
Q Consensus 62 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (573)
++.|++..|++.+.........+..++.|.++||+ |||+..+...++.+++++.--.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~---------------------- 118 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS---------------------- 118 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc----------------------
Confidence 57899999999999999999999999999999999 9999999999998888765443
Q ss_pred ccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCC-chHHHhHHHHHHHHH-HHHHhhhHHHHHHhhhhhcccc
Q 008231 142 IEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSD-PKEEKAMIFFFNRFY-FAISIGSLFAVIVLVYVQDNVG 219 (573)
Q Consensus 142 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~-~~~~ig~~~~~~~~~~l~~~~g 219 (573)
+++..++++|++.|++.....++.-++....+.++. +++- .+.-++... ....+-++.+.+++-++.+..|
T Consensus 119 -----~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~--L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~ 191 (354)
T PF05631_consen 119 -----SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW--LSDTFSLATFFGNGVVAIGAGVVANVLADWFG 191 (354)
T ss_pred -----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH--HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC
Confidence 367899999999999999988877775443333322 2221 344444333 2233344455555666666555
Q ss_pred h--hHHHHHHHHHHHHHHHHHHhcCcc
Q 008231 220 R--GWGYGISAGTMVVAAAILLIGTPW 244 (573)
Q Consensus 220 ~--~~~f~~~~~~~~~~~~~~~~~~~~ 244 (573)
. .++|..++...+++.+++....+|
T Consensus 192 ~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 192 FGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred CCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 4 788988887777766655544443
No 164
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.15 E-value=1.6e-10 Score=119.45 Aligned_cols=155 Identities=14% Similarity=0.037 Sum_probs=127.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGIS-MNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
+.++..+...++....+++.. ...|.|.++.+|.+..+.+.+.+...++..++.++.|++.||+ |||+.+..+..+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 345555555666666666665 6677777777999999999999999999999999999999998 99999988877777
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++..+..+.. .+.+.+++..++.|++.+...+...+++.|..|+++ |++
T Consensus 289 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 337 (365)
T TIGR00900 289 LAILVVGLTP-------------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGR 337 (365)
T ss_pred HHHHHHHhhc-------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHH
Confidence 7666665532 125567778888999999998999999999999887 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccc
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVG 219 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g 219 (573)
+.++++...++|..++|.++|++.+.+|
T Consensus 338 ~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 338 VFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999987654
No 165
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=8.7e-10 Score=118.99 Aligned_cols=158 Identities=11% Similarity=-0.021 Sum_probs=124.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.....+...++...++.......|.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++.++..+.++
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3455566666666666655566677888888999999999999888888888889999999998 999999999887777
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..++.+... . .+...+.+..++.|++.+...+....+..+..|+++ ++.+
T Consensus 340 ~~~~~~~~~~-~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 390 (471)
T PRK10504 340 VSLLFMLVAL-L----------------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSG 390 (471)
T ss_pred HHHHHHhccc-c----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccch
Confidence 7666655321 0 123334445667788888877888888889999887 9999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
++++++...+|..+|+.++|.+.+..|+
T Consensus 391 ~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 391 NSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999998776665
No 166
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.14 E-value=4.1e-10 Score=120.39 Aligned_cols=180 Identities=14% Similarity=-0.027 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.+|......++.....+++..++|.|+++..|+|..+.+++...+.+...++.+++|+++||+ ++++....+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 3566666666676777788889999999998999999999999999999999999999999998 654322233322221
Q ss_pred ---HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 113 ---VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 113 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
+..++..... .+.+......++.|.+.............|.+|+++ |
T Consensus 330 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 379 (438)
T TIGR00712 330 VTIAVIVYWMNPA------------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------A 379 (438)
T ss_pred HHHHHHHHHhcCC------------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------e
Confidence 1111111100 112223333344444322222222345678899888 9
Q ss_pred HHHHHHHHHHHHhhh-HHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 190 IFFFNRFYFAISIGS-LFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~-~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
+++.|+.+...++|+ .++|.+.|.+.+..||.+.|++..+..+++.+..++..+
T Consensus 380 g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 380 GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred eeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999988888774 689999999999999999988777666666555444443
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.13 E-value=4.5e-10 Score=118.40 Aligned_cols=171 Identities=11% Similarity=0.010 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDL---HLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
.++..++..+.....+.......+.|+.+.+ +.+....+.+.+...+...++.++.|++.||+ |||+.+.++..+.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 3444444444444444445556778887665 55666778888888888899999999999998 9999999998888
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++..+...+. +.+.+++.+++.|++..........+..+..+++. ++
T Consensus 295 ~l~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a 342 (396)
T TIGR00882 295 SVRIIGSSFAT--------------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SA 342 (396)
T ss_pred HHHHHHHHhcC--------------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EE
Confidence 88776666542 45566777888888766555555556666667666 66
Q ss_pred HHHHH-HHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHH
Q 008231 191 FFFNR-FYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 191 ~~~~~-~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 237 (573)
...+. ++....+|.++++.++|++.+..||+.+|.+.++..++..++
T Consensus 343 t~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 343 TIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred EeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 66666 678899999999999999999999999999877766555443
No 168
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.12 E-value=1.4e-09 Score=117.48 Aligned_cols=172 Identities=10% Similarity=0.057 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-------HHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYL-------TVAIFA 107 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-------~~~~~~ 107 (573)
.|.+....++.....+++.+++|.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ ...+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 44444444444555566777899999989999999999999999999999999999999998 8762 222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 108 SVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.+.+++..+.... .+.....+..++.+++.+...+...++..+..| +.
T Consensus 333 ~l~~i~~~~~~~~--------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~----- 380 (476)
T PLN00028 333 TLGGVFCIWLGRA--------------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS----- 380 (476)
T ss_pred HHHHHHHHHhccc--------------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh-----
Confidence 2222222222221 123333444445555544444455556666544 45
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhc
Q 008231 188 AMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIG 241 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 241 (573)
|+...++.+.+.++|+.++|.+.+ ..+..+|+..|++.++..+++.++.++.
T Consensus 381 -~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 381 -LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred -chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 899999987777788877776654 2234569999988877777776655544
No 169
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=8.9e-10 Score=116.41 Aligned_cols=173 Identities=15% Similarity=0.126 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHH-HHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFM-GTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+..+...++..........+.+.|+.+++|++..+.+++.+... .+..++.+++|++.||+ |||+.+.++..+..+.
T Consensus 211 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~ 289 (402)
T PRK11902 211 AWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 333344334433333333344556788889999999999887654 45788999999999998 9999887777666555
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHH----HHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAAL----YTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
.+.+......+ .+.+.+++.. +..|++.+...+....++.+.+|.++ +
T Consensus 290 ~l~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 341 (402)
T PRK11902 290 NLGYWVLAVTP----------------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y 341 (402)
T ss_pred HHHHHHHHhcC----------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H
Confidence 43332211001 1233333333 34566666667777778888777544 3
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
++++...++|..++..++|++.+.+||+..|.+.+++.+++.++...
T Consensus 342 ----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 342 ----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 44444456777766778999999999999999888777666555433
No 170
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.10 E-value=2.4e-09 Score=112.37 Aligned_cols=171 Identities=12% Similarity=-0.035 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
.+......++...+.+....++++|+.+.+|++..+.+++.+.+.++..++.++.|++.||+ |+|+.+..+..+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 44444444444555555667778899888999999999999999999999999999999998 99999998888777776
Q ss_pred HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCcccccccc-ccccCCCCCCCchHHHhHHHHH
Q 008231 115 GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVS-GFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.+..... .+.+..++..++.+.+.....+... ....+..+++. ++.+
T Consensus 280 ~~~~~~~-------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~- 327 (382)
T PRK10091 280 LMLFFFG-------------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA- 327 (382)
T ss_pred HHHHHHH-------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH-
Confidence 5554321 1223344444455555444333333 23333333333 4443
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcc-cchhHHHHHHHHHHHHHHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDN-VGRGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~ 239 (573)
..+...++|..+||.++|++.+. .+|++++.+.++..+++...+.
T Consensus 328 -~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 328 -GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred -HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 34567789999999999999885 6899999888766655544433
No 171
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.10 E-value=2.6e-09 Score=113.58 Aligned_cols=146 Identities=19% Similarity=0.126 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 008231 48 CAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMR 127 (573)
Q Consensus 48 ~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (573)
..+.+..++|.|+++ .|.+..+.+.+.+.+.++..++.++.|+++||+ |||+.+..+..+..+...+......
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQ----- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHcc-----
Confidence 344566788888875 699999999999999999999999999999998 9999998888776655544433211
Q ss_pred CCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHH
Q 008231 128 PPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFA 207 (573)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 207 (573)
.....+.+..+..+.+..+..+..+.++.|.+|++. |++++|+.+...++|+.++
T Consensus 319 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~g 373 (426)
T PRK12307 319 -------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFN 373 (426)
T ss_pred -------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHH
Confidence 011111122222222333334556678899999888 9999999999999999999
Q ss_pred HHHhhhhhcccchhHHHH
Q 008231 208 VIVLVYVQDNVGRGWGYG 225 (573)
Q Consensus 208 ~~~~~~l~~~~g~~~~f~ 225 (573)
|++.|++.+.+|+....+
T Consensus 374 p~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 374 SMAATWLGITMGLGAALT 391 (426)
T ss_pred HHHHHHHHHcccHHHHHH
Confidence 999999999888765433
No 172
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.10 E-value=8.4e-10 Score=117.75 Aligned_cols=162 Identities=14% Similarity=-0.011 Sum_probs=122.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.|.++..+...++...+++......+.|.+..++ +..+.+++.++..++..++.+++|+++||+ |||+++.++..+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~ 298 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMV 298 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 3456666777777777776665555556555566 566777788888899999999999999998 99999999988888
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCch-HHHhHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK-EEKAMI 190 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~-~~~~r~ 190 (573)
++.++..+.. .+.+.+++..++.|++.+...+...++++|..+.++.+ .+..+|
T Consensus 299 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 353 (437)
T TIGR00792 299 LGYLIFFFAG-------------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEG 353 (437)
T ss_pred HHHHHHHHcc-------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchH
Confidence 8776665531 13455666777888999888888889999887633210 011278
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
..++++++...+|..+++.+.|++.+..||
T Consensus 354 ~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 354 LVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999877666
No 173
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.09 E-value=1.8e-09 Score=114.45 Aligned_cols=165 Identities=12% Similarity=-0.069 Sum_probs=115.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHH-HHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVG-DLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLT-VAIFASVT 110 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-~~~~~~~~ 110 (573)
+..|......++....++++..++|.|+++ ..|.+..+++.......++..++.+++|+++||+ +||+. +.....+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 356667777777788888999999999987 3578888999999999999999999999999998 87764 33333333
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.++..+ .... . +....+.+..+.+.|.....+.......|.+|+++ |+
T Consensus 321 ~~~~~~-~~~~--~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~ 368 (412)
T TIGR02332 321 AAGWLL-ASAT--D-----------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RA 368 (412)
T ss_pred HHHHHH-HHhc--C-----------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HH
Confidence 333222 2111 0 11111112222233332222333445567788777 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGT 230 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~ 230 (573)
.++|+.+...++|+.++|.+.|.+.+..| |++.|++.++.
T Consensus 369 ~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 369 IAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 99999999999999999999999999875 99988766553
No 174
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.08 E-value=1.6e-07 Score=102.75 Aligned_cols=206 Identities=12% Similarity=0.133 Sum_probs=146.6
Q ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 33 LAAGLI-LGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 33 ~~~~~~-~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
+.+.++ ....+...+. .+..+...+-+++.++++.++.|++.+.+-++..+...+-.+.+-|. -|-+.+-+|.++++
T Consensus 96 k~fl~~l~~~~~~q~l~-~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLY-VGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMG 173 (735)
T ss_pred chHHHHHHHHHHHHHhh-hhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHH
Confidence 334444 4444444444 47777788889999999999999999999999999999999999997 88889999999999
Q ss_pred HHHHHHHhhccC-------------CCCCC------CCCcccccccc----ccc--cchhh-HHHHHHHHHHHHHhcCcc
Q 008231 112 LVVGLLTSATSI-------------PSMRP------PQCDDYRRKHH----QCI--EANGK-QLAMLYAALYTIALGGGG 165 (573)
Q Consensus 112 ~~~~~~~~~~~~-------------~~~~~------~~~~~~~~~~~----~~~--~~~~~-~~~~~~~~~~l~g~g~~~ 165 (573)
++.+++++=..+ +...+ ++|++.....+ .+- ..... -...++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 999998862100 00000 00110001111 110 01111 233677899999999999
Q ss_pred ccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhccc------------------c-hhHHHHH
Q 008231 166 IKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNV------------------G-RGWGYGI 226 (573)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~------------------g-~~~~f~~ 226 (573)
..+...+|+-|...+++ -...+|+.+....+|.++|.++++++...+ | |+.-|.+
T Consensus 254 i~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi 327 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLI 327 (735)
T ss_pred CccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHH
Confidence 99999999999988887 889999999999999999999998875321 3 5556777
Q ss_pred HHHHHHHHHHHHHhcCcccc
Q 008231 227 SAGTMVVAAAILLIGTPWYR 246 (573)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~ 246 (573)
.+.+.++..+.++++.++.+
T Consensus 328 ~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 328 CGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHhCcccCc
Confidence 77776666666666555443
No 175
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.08 E-value=5e-09 Score=112.89 Aligned_cols=178 Identities=13% Similarity=-0.063 Sum_probs=123.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHH--------
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLT-------- 102 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-------- 102 (573)
+++.+|...+..+.....++.+..++|.|+.+.+|.+..+.++..+...++..++.+++|+++||+ ++|+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~ 337 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARK 337 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHH
Confidence 445778888888999999999999999999999999999999999999999999999999999997 54421
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCC
Q 008231 103 VAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSD 182 (573)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~ 182 (573)
+..+......+..+..... .. .+....++...+.+.+.++..+.......|..|+ .
T Consensus 338 ~~~~~~~~~~~~~~~~~~~-~~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~ 393 (465)
T TIGR00894 338 IFNGIGGLGPGIFAYALPY-LS----------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F 393 (465)
T ss_pred HHHHHHHHHHHHHHHHHHH-cC----------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H
Confidence 1111111111111111110 00 1222333344444555555445554555566554 5
Q ss_pred chHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhccc---chhHHHHHHHHHHHHHHHHHH
Q 008231 183 PKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNV---GRGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 183 ~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~---g~~~~f~~~~~~~~~~~~~~~ 239 (573)
++.+.++.+...++|+.++|.+.|++.+.. +|...|.+.++..+++.++..
T Consensus 394 ------~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 394 ------LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 999999999999999999999999987643 388888887777666655443
No 176
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.08 E-value=2.5e-09 Score=102.24 Aligned_cols=168 Identities=13% Similarity=0.049 Sum_probs=135.0
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 008231 28 KTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFA 107 (573)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 107 (573)
.....+.+|++.+.+++-.++.+=....-+.+.++.+|+|+..++.+.++......+.+++.|.++|++ ||+-..+.+.
T Consensus 259 v~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a 337 (459)
T KOG4686|consen 259 VNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASA 337 (459)
T ss_pred ccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHH
Confidence 355667889999999888888777777778999999999999999999999999999999999999999 9997776665
Q ss_pred H-HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHH
Q 008231 108 S-VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEE 186 (573)
Q Consensus 108 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (573)
. .+.++..++.++ .+.-+++..+.|+.........+.+++-..|++.
T Consensus 338 ~~~tl~~H~~l~Ft----------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q---- 385 (459)
T KOG4686|consen 338 CILTLLGHSGLFFT----------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ---- 385 (459)
T ss_pred HHHHHHHhhhHHhh----------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH----
Confidence 4 445556666653 2234556667788877776667788888889888
Q ss_pred HhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc---hhHHHHHHHHH
Q 008231 187 KAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG---RGWGYGISAGT 230 (573)
Q Consensus 187 ~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g---~~~~f~~~~~~ 230 (573)
.|++++..+...|+|-.+-|+++|.+.+.-| |--+|++....
T Consensus 386 --LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 386 --LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred --hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999998655 33455544443
No 177
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.07 E-value=7e-09 Score=109.68 Aligned_cols=169 Identities=12% Similarity=-0.122 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.++...+...+.....+......|.|+.+++|++..+.++......++..++.++.|+++||+ |+|+.+.++..+.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 445555555555555556666778888889999999999888877788889999999999998 9999999988877777
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
..+..+..... ..+...++++.++.|+|.+...+........ .++++ |++..
T Consensus 295 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~------~g~~~ 346 (406)
T PRK15402 295 LLLAALATVIS---------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVS------KGTVS 346 (406)
T ss_pred HHHHHHHHHcc---------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hcccc------ccHHH
Confidence 77666532100 0234456677788888888776665554433 33456 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTM 231 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~ 231 (573)
+.+++...+|..+|+.+.+++.+..++....+..++..
T Consensus 347 ~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 384 (406)
T PRK15402 347 AAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANG 384 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Confidence 99999999999999999999988877665444444333
No 178
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.07 E-value=3.4e-09 Score=111.48 Aligned_cols=174 Identities=15% Similarity=-0.003 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHH-HHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMG-TLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+..+...++...+.....++.++|+.+ .|++..+.+++...... ...++.+++|++.||+ |+|+.+..+..+.++.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4444445555556666666778888875 79999999999888764 5667789999999998 9999998877665333
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCC-CCchHHHhHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDT-SDPKEEKAMIFF 192 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~ 192 (573)
............ ..+...++....+.+++.+...+...+...+..++ +. +++.
T Consensus 288 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~ 341 (390)
T TIGR02718 288 ALLWFAQAAFWL--------------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTD 341 (390)
T ss_pred HHHHHHHHHccc--------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHH
Confidence 322221110000 01222333444455556666666666776676665 55 8999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 236 (573)
++..+...++|..+||.++|++.+..|++..|.+.++..+++.+
T Consensus 342 ~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 342 VTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999877766555443
No 179
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.07 E-value=1.8e-09 Score=116.90 Aligned_cols=172 Identities=14% Similarity=0.029 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+...+...++.++....+...+|.+..+.+|.+....|++.+.+.++..++.++.+++.+|+ ++++.+..+.++++++
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~ 297 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALA 297 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHH
Confidence 333344444444555555667788888899999999999999999999999999999999998 9999999998888888
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.+.++++ .+.+..++..++.|++.........+.+.+..|++. ||+++
T Consensus 298 ~~~lal~--------------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~ 345 (524)
T PF05977_consen 298 LLLLALS--------------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVF 345 (524)
T ss_pred HHHHhcc--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHH
Confidence 8888776 356777788888999998888888899999999998 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAIL 238 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 238 (573)
+++++....+..+|.++.|.+.+.+|.+.++.++++..+++.++.
T Consensus 346 si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 346 SIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988887776655554443
No 180
>TIGR00895 2A0115 benzoate transport.
Probab=99.06 E-value=1.4e-09 Score=113.99 Aligned_cols=147 Identities=15% Similarity=-0.012 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+.+....++....++....++| ++.+++|.+..+.+.+.+...++..++.+++|+++||+ |||+.+.........+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 344445555566667777777777 66778999999999999999999999999999999998 9985544443333333
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
..+.... .+...+++..++.|++.+...+...+++.|.+|+++ |++++
T Consensus 329 ~~~~~~~--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 376 (398)
T TIGR00895 329 VLVGSTL--------------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGV 376 (398)
T ss_pred HHHHHHh--------------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHH
Confidence 2222211 134456667788899999888999999999999888 99999
Q ss_pred HHHHHHHHhhhHHHHHHhhhh
Q 008231 194 NRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l 214 (573)
++.+....+|..+||.++|++
T Consensus 377 g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 377 GWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999876
No 181
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.04 E-value=2.9e-11 Score=131.16 Aligned_cols=202 Identities=13% Similarity=0.101 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 008231 37 LILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGL 116 (573)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 116 (573)
.+++..+.+ ....+......+-+++.++++.+++|++.+.+-++..+..++-.++++|. .|-|-+-+|.++.++|.++
T Consensus 7 ~~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 7 FLCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHH
Confidence 344444555 66667777777889999999999999999999999999999999999996 7888888999999999988
Q ss_pred HHhhccC-CCC--------------CCCCC--------cccccccccc-ccchhhHHHHHHHHHHHHHhcCccccccccc
Q 008231 117 LTSATSI-PSM--------------RPPQC--------DDYRRKHHQC-IEANGKQLAMLYAALYTIALGGGGIKSNVSG 172 (573)
Q Consensus 117 ~~~~~~~-~~~--------------~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~ 172 (573)
+++=..+ +.+ ...-| .+......++ +.....-+..++++.++.|+|....++...+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 8762110 000 00111 0000000111 1222223567888999999999999999999
Q ss_pred cccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcc---------------------cc-hhHHHHHHHHH
Q 008231 173 FGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDN---------------------VG-RGWGYGISAGT 230 (573)
Q Consensus 173 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~---------------------~g-~~~~f~~~~~~ 230 (573)
|+-|..+++. -+...|+.+....+|.++|.++++.+... .| |..-|.+.++.
T Consensus 165 YiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 165 YIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999988 88999999999999999999988876531 12 55556555555
Q ss_pred HHHHHHHHHhcCcccc
Q 008231 231 MVVAAAILLIGTPWYR 246 (573)
Q Consensus 231 ~~~~~~~~~~~~~~~~ 246 (573)
.++..+-++.++++.+
T Consensus 239 ~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 239 LFLSAIPLFFFPKKLP 254 (539)
T ss_dssp ----------------
T ss_pred HHHHHHHHHcCCccCC
Confidence 5555544444444433
No 182
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.04 E-value=4.3e-09 Score=109.12 Aligned_cols=156 Identities=13% Similarity=-0.060 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..+......++....+++...++|.|+++ .|++..+.+.+.+.+.++..++.++.|+++||+.+||+.+.++..+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 445555555566667778888899999875 7999999999999999999999999999999983456677777777777
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..++.+..+ .. .. ...++.|++.+...+...+.+.+..++++ .++..
T Consensus 276 ~~~~~~~~~~------------------------~~--~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~ 323 (355)
T TIGR00896 276 GLCGLLFAPM------------------------HG--LW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAAL 323 (355)
T ss_pred HHHHHHHhhh------------------------hH--HH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHH
Confidence 7766655321 11 11 13457789998888877776665554332 17888
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccc-hh
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVG-RG 221 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~ 221 (573)
.++.+...++|..++|.+.|++.+..| |.
T Consensus 324 ~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 324 SAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 898888889999999999999998776 44
No 183
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.04 E-value=1.8e-08 Score=104.82 Aligned_cols=140 Identities=16% Similarity=0.289 Sum_probs=103.4
Q ss_pred cccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Q 008231 374 GSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLV 453 (573)
Q Consensus 374 ~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv 453 (573)
+...+.+-.+-+++-++..+++ +|.. +.+.+..|+.+..+-++.+..+. +.|..+
T Consensus 409 Gv~~a~~~~gEI~~~ffs~klI----~kiG-------Hv~v~~lgLa~~~~Rf~~~S~L~--------------n~W~vL 463 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSFKLI----EKIG-------HVNVMYLGLACNVGRFLYYSYLQ--------------NPWMVL 463 (618)
T ss_pred eehhhhhccchHHHHHHHHHHH----HHhc-------ccceeeehhhHHHHHHHHHHHhc--------------Cchhee
Confidence 3445556566666666666665 4432 23347788888888888777763 567778
Q ss_pred HHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHH
Q 008231 454 PQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFL-SAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWL 532 (573)
Q Consensus 454 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~-~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~ 532 (573)
+.-++.|+..+.++....+|++..+|++.+++++++.. ....+|-.+|++++|.+.+.. +....|+.
T Consensus 464 Pieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f------------g~~ttf~~ 531 (618)
T KOG3762|consen 464 PIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF------------GARTTFRI 531 (618)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee------------hhHHHHHH
Confidence 88899999999999999999999999999999999987 557888889999988876532 23356777
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 008231 533 LAVLGLLNFMVFLFFAMK 550 (573)
Q Consensus 533 ~a~~~~l~~~~~~~~~~~ 550 (573)
+++.+++..+.+...-+.
T Consensus 532 ~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 532 FGIACLVTLALFISIQLL 549 (618)
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 777777776666554443
No 184
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.03 E-value=2.1e-09 Score=116.29 Aligned_cols=157 Identities=11% Similarity=-0.013 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.++......++..+.+++...++|.|+++.+|.+..+.+++.....++..++.++.|++.||+ |||+.+.++..+.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3455566667777778888888999999999999999999999999999999999999999998 999999999888888
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..++.+... + ..+.+.+....++.|+|.+...+.......+..|+++ |+.+
T Consensus 334 ~~~~~~~~~~-~---------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~ 385 (485)
T TIGR00711 334 GFYWRAFTFT-P---------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARG 385 (485)
T ss_pred HHHHHhccCC-C---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHH
Confidence 8777663211 0 0134455566778899988877777777778888877 9999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhccc
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNV 218 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~ 218 (573)
.++++...++|+.+|+.+.+.+.+..
T Consensus 386 ~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 386 SSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887643
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.02 E-value=9.4e-09 Score=111.09 Aligned_cols=158 Identities=15% Similarity=-0.048 Sum_probs=111.8
Q ss_pred HHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccccc
Q 008231 58 TYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRK 137 (573)
Q Consensus 58 ~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (573)
+++.++.|.+..+..+......+...++.+++|+++||+ |||+.++.+..+.+++.++++.......
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~~------------ 361 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQA------------ 361 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcCc------------
Confidence 344457898888777777778888899999999999998 9999999999988888777764321000
Q ss_pred ccccccchhhHHHHHHHHHHHHHhcCcc-ccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhh---
Q 008231 138 HHQCIEANGKQLAMLYAALYTIALGGGG-IKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVY--- 213 (573)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~g~g~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~--- 213 (573)
... ....+..+.+.+.+. ..|....+++|.+|+++ |++++++.+...++|.++++.+.+.
T Consensus 362 ---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~ 425 (479)
T PRK10077 362 ---------PGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDK 425 (479)
T ss_pred ---------ccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 111 122233333333332 34677899999999888 9999999999888888888665544
Q ss_pred ---hhcccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 008231 214 ---VQDNVGRGWGYGISAGTMVVAAAILLIGTPW 244 (573)
Q Consensus 214 ---l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 244 (573)
+.+.++|++.|++.++..+++.+..++..|+
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 426 NSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred ccchhhhccCccHHHHHHHHHHHHHHHHHhcccc
Confidence 4457788888888776666665554444443
No 186
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.01 E-value=5.4e-09 Score=113.81 Aligned_cols=174 Identities=13% Similarity=0.022 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhH------------HHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 41 TELSERICAMGISMNLVTYLVGDLHLSSAKSAT------------IVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 41 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
..+...+.+|++..+.|.+++ +.|++..+.+. ...+..++..++.+++++++||+ |||++++++..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 344455677888777888875 67887553321 12223344556778889999998 99999988887
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+.+++..+..+..... . .+ ..+....+....+..+..+....+.+|.+|++.
T Consensus 374 ~~~~~~~~l~~~~~~~--------------------~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------ 425 (502)
T TIGR00887 374 ILTVLFFVLGFAYNHL--------------------S-TH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------ 425 (502)
T ss_pred HHHHHHHHHHHHHHhc--------------------c-hh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------
Confidence 7777766555432100 0 01 111111111222222334556677899999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcc----------cchhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDN----------VGRGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
|+++.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.+ +..||.
T Consensus 426 R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt 491 (502)
T TIGR00887 426 RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPET 491 (502)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccC
Confidence 99999999999999999999999998873 344556776666655554443 344543
No 187
>PRK10054 putative transporter; Provisional
Probab=99.00 E-value=3.6e-09 Score=111.55 Aligned_cols=171 Identities=9% Similarity=-0.064 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVG--DLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.++......++..+.+.....+.+.|+.. +.+.+....+.+.+..........++.|++.||+ ++|+.+..++.+..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 44444444555555554455566666653 4455666777777777777777788889999998 99999999988888
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++..+..++. .+.+.+.++..+.++|.+...|...+++.+..|++. |++
T Consensus 286 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~ 334 (395)
T PRK10054 286 IGLVGFIFSG-------------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KAS 334 (395)
T ss_pred HHHHHHHHcc-------------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------cee
Confidence 8776666532 245566677788999988888888888999999887 888
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHH
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 237 (573)
.++..+ ...+|..+||.++|++.+..|....|++.+.+..+++++
T Consensus 335 ~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 335 YFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred hHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHH
Confidence 888765 566999999999999999999888887765555444443
No 188
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.99 E-value=3.9e-09 Score=114.71 Aligned_cols=154 Identities=11% Similarity=0.003 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
|.+.......++....+++...++|.|+++.+|.|..+++.....+.++..++.++.|++.||+ |+|+.+..+..+.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3455566666677777778888899999999999999999999999999999999999999998 999999989888888
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..++.+... . .+.+...+..++.|+|.|...+.......+..|+++ ++.+
T Consensus 338 ~~~~l~~~~~-~----------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~ 388 (495)
T PRK14995 338 SFYGLAMTDF-S----------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAA 388 (495)
T ss_pred HHHHHHHhcC-C----------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchH
Confidence 7766654321 0 133445567788899999988888888888889888 9999
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhc
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQD 216 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~ 216 (573)
.++++...++|..+|+.+.+.+.+
T Consensus 389 ~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 389 GAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998865
No 189
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.99 E-value=2.1e-08 Score=105.67 Aligned_cols=168 Identities=8% Similarity=-0.076 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.++..+...++....+++...++++++.+++|++..+.+.+...+.++..++.++.|++.||. +|+..+.........
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~ 294 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHH
Confidence 3445554445555556666666765555668899999999999999999999999999999996 554444433332333
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
...+.... .+.+.+.+..++.|++.+...+...+++.+..|+ + +++.
T Consensus 295 ~~~l~~~~--------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~ 341 (394)
T PRK10213 295 ALVLTLWG--------------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKA 341 (394)
T ss_pred HHHHHHHh--------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHH
Confidence 33333322 2455666777888999998888888888888773 3 5666
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVA 234 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 234 (573)
.+.+....++|..+||.++|++.+..|++..+...++..++.
T Consensus 342 ~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 342 GSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 777777889999999999999999999888887766544433
No 190
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.99 E-value=5.2e-07 Score=94.67 Aligned_cols=103 Identities=12% Similarity=0.051 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHH
Q 008231 75 VTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYA 154 (573)
Q Consensus 75 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (573)
.++......+.+++++.+.|+. |.|+.+.++...+....+..-+ .|-+.++.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~---------------------------~N~y~~yf 107 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF---------------------------PNSYYLYF 107 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh---------------------------cchHHHHH
Confidence 5667778889999999999998 9999999999988877666655 36678899
Q ss_pred HHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHh
Q 008231 155 ALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVL 211 (573)
Q Consensus 155 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~ 211 (573)
+-++.|+|.+..+.....++++..+++. +.+..++.......+.++|.++.
T Consensus 108 ssallG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 108 SSALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HHHHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 9999999999999999999999988877 88888887666777776664443
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.96 E-value=1.1e-08 Score=106.91 Aligned_cols=162 Identities=10% Similarity=-0.003 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+...+...+....++....+.|.|+++++|.++.+.+.+.+...++..++.++.|++.||+ |||+.+..+..+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444444455556666777788899989999999999999999999999999999999998 9999998888777777
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
..++....... ......++...++.|++.+...+.......|..| ++ |+++.
T Consensus 286 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 337 (385)
T TIGR00710 286 AVLLEITAILG---------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTAS 337 (385)
T ss_pred HHHHHHHHHhc---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHH
Confidence 66665432100 0123344555667888888888888888888776 45 89999
Q ss_pred HHHHHHHH-hhhHHHHHHhhhhhcccchhHHHH
Q 008231 194 NRFYFAIS-IGSLFAVIVLVYVQDNVGRGWGYG 225 (573)
Q Consensus 194 ~~~~~~~~-ig~~~~~~~~~~l~~~~g~~~~f~ 225 (573)
++.+.... +|++.+|+ .+.+.+..+|...+.
T Consensus 338 ~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 338 ALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHHHH-HHhccccChHHHHHH
Confidence 98776665 45555554 455555445544443
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.95 E-value=1.3e-08 Score=121.98 Aligned_cols=164 Identities=14% Similarity=0.044 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCch-hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSA-KSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
+.++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++++.++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 3445555555555555566777889999999999999 999999999999999999999999998 99999888888777
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++.+++.+. .+.+.+++..++.|++.++..+...+++.+..|++. |++
T Consensus 311 ~~~~~~~~~--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~ 358 (1146)
T PRK08633 311 LSLFLLPTA--------------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGK 358 (1146)
T ss_pred HHHHHHHHh--------------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhh
Confidence 777666654 245566777888999999988888999999999998 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhc-ccchhHHHHHHHH
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQD-NVGRGWGYGISAG 229 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~ 229 (573)
++++.++..++|.++++.+++.+.. .+++...|++.+.
T Consensus 359 ~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 359 VLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999999999888888776653 2345555554443
No 193
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.94 E-value=7.2e-09 Score=105.39 Aligned_cols=171 Identities=13% Similarity=0.059 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+..-++..++-+=+.-++......|-..++|++..+...+-...++...++++++|+|.||+ |-|+++.+++++..+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 555556666655555557888888999999999999999999999999999999999999998 9999999999887777
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
++...+.. ....+++.-.+.|+..|..++..-++.++..|+++ -++.|
T Consensus 332 ~~~~~~~~--------------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fF 379 (438)
T COG2270 332 ALYLIFLE--------------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFF 379 (438)
T ss_pred HHHHHHcc--------------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------cccee
Confidence 66665532 22345555567899999999999999999999998 89999
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~ 237 (573)
|+++.....++.+||.+.+.+.+..| -|..+....+..+++++.
T Consensus 380 glyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 380 GLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred ehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 99999999999999999999988766 455554444444444443
No 194
>PRK10133 L-fucose transporter; Provisional
Probab=98.94 E-value=1.5e-08 Score=108.19 Aligned_cols=164 Identities=13% Similarity=0.011 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYL-VGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
+......++.....++...+++.|+ ++.+|+++.+.+.....+.++..++.+++|++.||+ |||+++..+..+.+++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 3344444555566666677888886 567899999999999999999999999999999998 99999988877766665
Q ss_pred HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHH
Q 008231 115 GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFN 194 (573)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 194 (573)
.+..+.. +. ..+....+.|+|.+...|+..+...+.+|++ .+.+.+
T Consensus 340 ~~~~~~~--------------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~ 385 (438)
T PRK10133 340 LISAFAG--------------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSS 385 (438)
T ss_pred HHHHHcC--------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchh
Confidence 5544431 11 1234556789999999999999999987753 344555
Q ss_pred HHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHH
Q 008231 195 RFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAA 235 (573)
Q Consensus 195 ~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~ 235 (573)
+... ..+|+.++|.+.|++.+..| -+..|++..+..+...
T Consensus 386 l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 386 FIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 5443 34688889999999999887 7888887666544433
No 195
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.93 E-value=3.7e-08 Score=104.42 Aligned_cols=182 Identities=13% Similarity=0.024 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..|.+++..++..-.|.+...++|.|+++.+. .........+..+...+..+++|+++||+ |+||++.++..+..+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 456888887777777777777789999887653 33333334445778889999999999998 999999998887777
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCC----------
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSD---------- 182 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~---------- 182 (573)
+........ |.. ...+++.+.++.+...++.|.-+.....++.+++|++.
T Consensus 329 ~~~~~~l~l--p~~------------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~ 388 (462)
T PRK15034 329 FSALLFLTL--PGT------------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGS 388 (462)
T ss_pred HHHHHHHHh--ccc------------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccc
Confidence 664433321 100 00245555555555556666666667778888777410
Q ss_pred -----chHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHH
Q 008231 183 -----PKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 183 -----~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~ 237 (573)
...+++-+.+.|+......+|+++-|.+.|...+..| +...|++..+..++..++
T Consensus 389 ~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 449 (462)
T PRK15034 389 DEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLL 449 (462)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 0112237788888889999999999988887776655 777787776665554443
No 196
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.92 E-value=2.2e-08 Score=105.80 Aligned_cols=151 Identities=7% Similarity=-0.056 Sum_probs=109.9
Q ss_pred HHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 008231 52 ISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQC 131 (573)
Q Consensus 52 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (573)
...++|.|+++..+ ++.+.+++.+...+....+..+.+++.||..+.++.+..+..+.+++..+++++.
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 44567888876655 7788888887777766655555566666532667777777777777776666542
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHh
Q 008231 132 DDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVL 211 (573)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~ 211 (573)
+.+.+.+...+.+++.+...|...+++.+..|+++ |++++++++...++|..+||.++
T Consensus 296 ----------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~ 353 (400)
T PRK11646 296 ----------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGG 353 (400)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccch
Confidence 34455566677888888888888999999999988 99999999999999999999999
Q ss_pred hhhhccc---c-hhHHHHHHHHHHHHHH
Q 008231 212 VYVQDNV---G-RGWGYGISAGTMVVAA 235 (573)
Q Consensus 212 ~~l~~~~---g-~~~~f~~~~~~~~~~~ 235 (573)
|++.+.. + ...++++..+..++..
T Consensus 354 G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (400)
T PRK11646 354 GWLFDLGKALNQPELPWMMLGIIGLITL 381 (400)
T ss_pred HHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 9998764 2 2344544444444433
No 197
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.91 E-value=3.2e-09 Score=109.29 Aligned_cols=144 Identities=20% Similarity=0.082 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-chhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLS-SAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
+|......+.....++....++|.|+.+.+|++ ..+.+.+.+...+...++.++.|+++||+ |+|+...+......++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHH
Confidence 344555555556677778889999999999999 79999999999999999999999999998 9888888777777776
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
...+.+.... .+....++..++.|++.+...+...+++.|.+|+++ |+++.
T Consensus 287 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 337 (352)
T PF07690_consen 287 ALGLLLLPFS-----------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAF 337 (352)
T ss_dssp HHHHCCSHHH-----------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHH
T ss_pred HHHHHHHHHh-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHH
Confidence 6666553210 134556667778899999999999999999999988 99999
Q ss_pred HHHHHHHHhhhHHHH
Q 008231 194 NRFYFAISIGSLFAV 208 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~ 208 (573)
++.+...++|..+||
T Consensus 338 g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 338 GLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC
Confidence 999999999999987
No 198
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.90 E-value=1.5e-08 Score=121.43 Aligned_cols=184 Identities=13% Similarity=-0.045 Sum_probs=133.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.+.++..++..++.++.++++..++|.|+.+.+|.+..+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~ 302 (1140)
T PRK06814 224 DKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMG 302 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHH
Confidence 34566777777777777777888999999999999999999999999999999999999999987 77766666665555
Q ss_pred HHHHHHHhhcc--CCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 112 LVVGLLTSATS--IPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 112 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
++.+.+.+... .+......+ .-+.. ...+.+.++++.++.|++.+...+...+++.+.+|++. |
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~ 368 (1140)
T PRK06814 303 LFGLDLAFASSSVPAEPAQLKS-------ILVFL-SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------R 368 (1140)
T ss_pred HHHHHHHhcccccccccccccc-------hhhhh-cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------c
Confidence 55444433200 000000000 00000 00134566777888899999999899999999999999 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhhhc-ccchhHHHHHHHHH
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYVQD-NVGRGWGYGISAGT 230 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~~ 230 (573)
|+++|..++..++|..+++++++.+.+ ..++...+++.++.
T Consensus 369 G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 369 ARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999999999998873 44666666544443
No 199
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.89 E-value=4.6e-08 Score=101.97 Aligned_cols=167 Identities=13% Similarity=-0.109 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccch---hHHHHH-HHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGR---YLTVAI-FAS 108 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr---r~~~~~-~~~ 108 (573)
+.+|.+....++....+|++..++|.|+++ .|++.. .+....+..+.+.++ .++++||. .| |+.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 567888888899999999999999999964 678764 555555555544444 47778876 44 333332 333
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
+.+++....++.. +....++...+.+++.....+...++.+|.+|++.
T Consensus 266 ~~a~~~~~~~~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------ 313 (368)
T TIGR00903 266 LIAAFFLALAFEL--------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------ 313 (368)
T ss_pred HHHHHHHHHHHcc--------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------
Confidence 3333333333321 12233334455666666666777889999999998
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILL 239 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 239 (573)
|+++.|+.+...++|++.+|++.+.+.. |.+..|.+.++..+++.+...
T Consensus 314 rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 314 HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988774 666777766666666555443
No 200
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.87 E-value=8.3e-08 Score=101.11 Aligned_cols=159 Identities=13% Similarity=0.002 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 008231 46 RICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPS 125 (573)
Q Consensus 46 ~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (573)
..........++.|+++.+|.++.+.|.+.+...++..++.++.+++.||+ ++|+++..+..+ ++...+..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~----- 290 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ----- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH-----
Confidence 344445555667888889999999999999999999999999999999998 888888777533 3333333332
Q ss_pred CCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhH
Q 008231 126 MRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSL 205 (573)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 205 (573)
.+.+...+..++.|++.+...+...+.+.+..|++. . ++++.++.+...++|..
T Consensus 291 ---------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-~----~g~~~a~~~~~~~~~~~ 344 (393)
T PRK11195 291 ---------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-G----AGHSIAVQNFNENLAML 344 (393)
T ss_pred ---------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-c----chhHHHHHhHHHHHHHH
Confidence 244555666778899988888888888877644331 1 69999999999999999
Q ss_pred HHHHHhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 008231 206 FAVIVLVYVQDNVGRGWGYGISAGTMVVAAAIL 238 (573)
Q Consensus 206 ~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 238 (573)
++..+.+.+ +..|-++.+.+..+..++.....
T Consensus 345 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 345 LMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 999998866 56787777776655555444433
No 201
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.84 E-value=1.3e-07 Score=100.87 Aligned_cols=163 Identities=17% Similarity=0.041 Sum_probs=133.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.|....++...++...+.....+..+.|.+..+|.+ ...+.+..+..+...++.+++++++||+ |+|+++..+..+.+
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAA 301 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHH
Confidence 356677777777777777777777777777778877 5667778888999999999999999998 99999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCch-HHHhHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK-EEKAMI 190 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~-~~~~r~ 190 (573)
++.++..+... .+.+.+++..++.|++.+...+...++++|..+.++.+ .+...|
T Consensus 302 ~~~~~~~~~~~------------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g 357 (428)
T PF13347_consen 302 LGFLLLFFLGP------------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREG 357 (428)
T ss_pred HHHHHHHHHHh------------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchH
Confidence 99888877521 36778888889999999999999999999998855321 112268
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
..++.++....+|..+++.+.+.+.+..|+
T Consensus 358 ~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 358 MYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 888999999999999999999988766554
No 202
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.83 E-value=7.4e-08 Score=100.56 Aligned_cols=149 Identities=8% Similarity=-0.106 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+..++..++...+.+....+.|.++.+.+|++..+.+.+.+...+...++.+++|++.||+ |||+++.++..+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 195 RVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344444455555555666666777888888999999999999999999999999999999998 9999998887664443
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.+........+ .+.+.+.++..+.+.+.+...+.....+.|..| +. ++++.
T Consensus 274 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 324 (377)
T PRK11102 274 GIWLVVSALLD----------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTAS 324 (377)
T ss_pred HHHHHHHHHHh----------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHH
Confidence 32222110000 123333444444444455555555566777666 55 88888
Q ss_pred HHHHHH-HHhhhHHHHHHhh
Q 008231 194 NRFYFA-ISIGSLFAVIVLV 212 (573)
Q Consensus 194 ~~~~~~-~~ig~~~~~~~~~ 212 (573)
++.+.. ..+|..+++++++
T Consensus 325 ~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 325 SLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 886543 4567777766654
No 203
>PRK09848 glucuronide transporter; Provisional
Probab=98.83 E-value=4.2e-08 Score=105.24 Aligned_cols=163 Identities=13% Similarity=0.040 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
|.++..+...++...+++......+.|+++.+|.+....++......+...++.++.++++||+ |+|+++.++..+.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4556666666666677666666677788888888776655555544666788899999999998 999999999988888
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchH-HHhHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKE-EKAMIF 191 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~ 191 (573)
+.+++.+... .+.+.+++..++.|+|.+...+...++.+|..|.++.+. +..+|.
T Consensus 307 ~~~~~~~~~~------------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~ 362 (448)
T PRK09848 307 GYLLFFWVSV------------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGL 362 (448)
T ss_pred HHHHHHHcCc------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhH
Confidence 8776665321 245566677788899999999999999999877553110 011588
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
.++.+++...+|..+|+.+.+.+.+..|+
T Consensus 363 ~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 363 TYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88999999999999999999988765554
No 204
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.82 E-value=3.3e-08 Score=105.35 Aligned_cols=179 Identities=14% Similarity=0.067 Sum_probs=123.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccc-------hhHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLG-------RYLTV 103 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-------rr~~~ 103 (573)
..+.+|.+.+..+.++++++.+..++|.|+.+.+|++..+.|+..++-.+...+..+++|.++||... +||.+
T Consensus 256 ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 256 TSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999722 12222
Q ss_pred H-HHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCC
Q 008231 104 A-IFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSD 182 (573)
Q Consensus 104 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~ 182 (573)
- ++....+++.+.+++...-. .......+.++..+.|+..+++. .-..|..| +.
T Consensus 336 n~i~~~~~ai~l~~l~~~~~~~--------------------~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~ap-q~ 390 (466)
T KOG2532|consen 336 NTIAFGGPAVFLLVLAFTSDEH--------------------RLLAVILLTIAIGLSGFNISGFY----KNHQDIAP-QH 390 (466)
T ss_pred HhHHHHHHHHHHHeeeecCCCc--------------------chHHHHHHHHHHHHcccchhhhH----hhhhhccc-hH
Confidence 2 23333333333333321100 00011222222222333333322 22233333 33
Q ss_pred chHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcc---cchhHHHHHHHHHHHHHHHHHHh
Q 008231 183 PKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDN---VGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 183 ~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
-+..+++.+...++.++++|.+.+.+... ..|+++|.+.++..+++.+.+.+
T Consensus 391 ------a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 391 ------AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 79999999999999999999999999842 36999999998887777655443
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.80 E-value=5.4e-08 Score=100.85 Aligned_cols=145 Identities=17% Similarity=0.086 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHH-HHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFM-GTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
..+.+.+..++....++...++++.|+++ +|++..+.+.+.++.. +...++.+++|+++||+ |||+.+.++.++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 35666666677778888888999999987 9999999998888766 56789999999999998 999999888887777
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
+..+..+..+... +++ .+..+.+.+..+.++.+++.+...+...+++.|.+|++. |++.
T Consensus 288 ~~~~~~~~~~~~~------------~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~ 346 (356)
T TIGR00901 288 TNAGFVWLASNGH------------HDG---ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQ 346 (356)
T ss_pred HHHHHHHHHhcCc------------ccc---cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHH
Confidence 6665544211000 000 000134566777888899999999999999999999999 9999
Q ss_pred HHHHHHHHH
Q 008231 193 FNRFYFAIS 201 (573)
Q Consensus 193 ~~~~~~~~~ 201 (573)
+++++...+
T Consensus 347 ~g~~~~~~~ 355 (356)
T TIGR00901 347 MALLSSLSA 355 (356)
T ss_pred HHHHHHHHh
Confidence 999877654
No 206
>TIGR00898 2A0119 cation transport protein.
Probab=98.78 E-value=5.9e-08 Score=105.70 Aligned_cols=142 Identities=14% Similarity=-0.018 Sum_probs=100.6
Q ss_pred hhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccccccccc
Q 008231 62 GDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQC 141 (573)
Q Consensus 62 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (573)
+.++.+... ......+....+.++.+++.||+ |||+++.++.++.+++.+++.+..+
T Consensus 351 ~~~~~~~~~---~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~------------------- 407 (505)
T TIGR00898 351 GNLGGNIYL---DLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV------------------- 407 (505)
T ss_pred cccCCChHH---HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC-------------------
Confidence 344554332 23344566677888899999998 9999999998888888777666421
Q ss_pred ccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchh
Q 008231 142 IEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRG 221 (573)
Q Consensus 142 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~ 221 (573)
...+...+..++.+.+.+...+....+.+|.+|++. |++++++.+....+|++++|.+.+ + ...++.
T Consensus 408 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~ 474 (505)
T TIGR00898 408 -----DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-L-GEKWLF 474 (505)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHh
Confidence 111233333445555556666777889999999988 999999999999999999999998 4 345666
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008231 222 WGYGISAGTMVVAAAILL 239 (573)
Q Consensus 222 ~~f~~~~~~~~~~~~~~~ 239 (573)
.++++.++..+++.+..+
T Consensus 475 ~~~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 475 LPLVLFGGLALLAGILTL 492 (505)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 777766665555544433
No 207
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.77 E-value=2.4e-07 Score=97.36 Aligned_cols=177 Identities=10% Similarity=-0.045 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
+.+.+...++....+-....+.+.|+++.-|.+....+.+.++..++-.+.-.+.+++..|+ |-|+++.++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44445555566666666677888898865557888888877877888888888999999998 99999999999988887
Q ss_pred HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHH
Q 008231 115 GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFN 194 (573)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 194 (573)
.+.+..++ | .+......+.+..+.|+..+.+......++.+..|++. |+++.+
T Consensus 288 ~l~a~~~~-~--------------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~ 340 (400)
T PF03825_consen 288 LLYAYFSD-P--------------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQG 340 (400)
T ss_pred HHHHHhcC-C--------------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHH
Confidence 77777521 0 00112223444567999999999999999999999999 999999
Q ss_pred HHHH-HHHhhhHHHHHHhhhhhcccchhH------HHHHHHHHHHHHHHHHH
Q 008231 195 RFYF-AISIGSLFAVIVLVYVQDNVGRGW------GYGISAGTMVVAAAILL 239 (573)
Q Consensus 195 ~~~~-~~~ig~~~~~~~~~~l~~~~g~~~------~f~~~~~~~~~~~~~~~ 239 (573)
+++. ...+|..+|..++|++.+.+|-+. .+.+.++..++..+.+.
T Consensus 341 l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 341 LYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9776 468999999999999999877543 34444444444444333
No 208
>PRK11043 putative transporter; Provisional
Probab=98.75 E-value=2.7e-07 Score=97.40 Aligned_cols=149 Identities=11% Similarity=-0.098 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccC
Q 008231 44 SERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSI 123 (573)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 123 (573)
+....++....+.|.|++ +.|++..+.++......++..++.++.+++.||+ |+|+.+.......+++...+......
T Consensus 214 ~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333445556667777775 5799999999888888888889999999999998 99987766655555544333221100
Q ss_pred CCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhh
Q 008231 124 PSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIG 203 (573)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 203 (573)
. ..+...+++...+.|++.+...+...+...+..| ++ ++++.++++.....+
T Consensus 292 ~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~~ 343 (401)
T PRK11043 292 S---------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLGL 343 (401)
T ss_pred c---------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHHH
Confidence 0 0123344455566788888888887777777665 45 899999999888888
Q ss_pred hHHHHHHhhhhhcccchhH
Q 008231 204 SLFAVIVLVYVQDNVGRGW 222 (573)
Q Consensus 204 ~~~~~~~~~~l~~~~g~~~ 222 (573)
+..++.+.+.+.+......
T Consensus 344 ~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 344 CFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHccCCChhHH
Confidence 8889999998876443333
No 209
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.75 E-value=2.3e-07 Score=97.59 Aligned_cols=71 Identities=10% Similarity=-0.042 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhh
Q 008231 49 AMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSA 120 (573)
Q Consensus 49 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~ 120 (573)
......+.|.|+.+++|++..+.+.+.+...+...++.++.|++.||+ |||+.+.++..+..++..++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 219 ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455567788889999999999999999999999999999999998 99999999988888877776664
No 210
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=8.2e-08 Score=103.57 Aligned_cols=176 Identities=18% Similarity=0.102 Sum_probs=147.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccc--hhHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLG--RYLTVAIFASVT 110 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~~~~~~~~~ 110 (573)
+..+.+.+...+..++++.-..+++.|.. +++.+..+++.++++..+...++.++.|+++|+. . ++.+..+++++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 46777888888888888888888888877 8999999999999999999999999999999997 6 444555666666
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+++...+.+++ +++.++..-.+.|++.|.+.+..+..+.|..+.++ -.
T Consensus 376 gl~~~~~p~~~--------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~ 423 (509)
T KOG2504|consen 376 GLARLFLPFAT--------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LS 423 (509)
T ss_pred HHHHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cc
Confidence 66666666653 45677777788999999998888889999999988 99
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGTMVVAAAILLIGT 242 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 242 (573)
.++|+......++..+||++.|++.+..| |...|+...+..+++.+.+++..
T Consensus 424 ~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 424 NAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999999999999888 99999988888877776655544
No 211
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.72 E-value=2e-07 Score=98.65 Aligned_cols=192 Identities=12% Similarity=0.029 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.+.+.+...+...+.--.....-.+.+-++-|++..++.++.........+..+++.++.||+ |||+.++++..+..+
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHH
Confidence 3455555555555554322233334455567899999999999999999999999999999998 999999999999888
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCc-cccccccccccCCCCCCCchHHHhHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGG-GIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
...++.....+-.. ....-.+..+++.++..++.+ +..|..+-+.+|.+|++. |..
T Consensus 348 ~~~~~~~~~~l~~~-----------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~a 404 (485)
T KOG0569|consen 348 ALLLMSIALFLSNS-----------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSA 404 (485)
T ss_pred HHHHHHHHHHHHHH-----------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHH
Confidence 88777765321100 000001122333333333222 235777889999999998 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccccC
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKK 249 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (573)
++++......+..++-......+.+.+|- ..|.+.++.+.+..+.+++..||.+.+.
T Consensus 405 a~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 405 AQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 99998888877777776777777777775 5666666666677777777777765443
No 212
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.72 E-value=6.9e-07 Score=89.27 Aligned_cols=165 Identities=15% Similarity=-0.003 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..|.+..-.-+++..+|.+..++|.++. +.|+|..++|...+..++......+..-.+++|...+|+..+....+..+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 35677777777899999999999999988 67999999999999999999999999999999876888988888888899
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFF 192 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 192 (573)
|.+.+.+... +...+. .+++|+|.|...|....++.+..++.+. -++.
T Consensus 287 G~~G~~~~P~-------------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~L 334 (395)
T COG2807 287 GLVGLLLAPG-------------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAI-----AAAL 334 (395)
T ss_pred HHHHHHHhhh-------------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHH-----HHHH
Confidence 8888877531 222222 4789999999999999999997765541 4555
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccc-hhHHHHHHHHH
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVG-RGWGYGISAGT 230 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~ 230 (573)
.++.+....+=+.+||.+.|++-|..| |+.+...-+..
T Consensus 335 SgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~ 373 (395)
T COG2807 335 SGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALA 373 (395)
T ss_pred HHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHH
Confidence 666666666667789999999988775 88776654443
No 213
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.72 E-value=2.2e-07 Score=92.52 Aligned_cols=172 Identities=13% Similarity=0.078 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCc----hhh------------hH-HHHHHHHHHHHHHhHHHHHhh
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGD--LHLSS----AKS------------AT-IVTNFMGTLNLLGLLGGFLAD 94 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~----~~~------------~~-~~~~~~~~~~~~~~~~G~laD 94 (573)
....+-...|.+.+.||+..-..+...+.. .|+.. .+. .. =.-+.++..+-+.++.+++.|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 445556667778888888765444333321 11111 111 11 122345667778899999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccc
Q 008231 95 AKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFG 174 (573)
Q Consensus 95 r~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~ 174 (573)
|+ |||++|....++++++.+++....+- + .....++.+|+.+. +...+++.|.
T Consensus 407 rl-GRKkTMal~l~~f~iflfll~~c~~r---------------------n-~~tvllf~arafis----g~fqvaYvYt 459 (528)
T KOG0253|consen 407 RL-GRKKTMALSLILFGIFLFLLTTCKTR---------------------N-AYTVLLFTARAFIS----GAFQVAYVYT 459 (528)
T ss_pred Hh-cchhHHHHHHHHHHHHHHHHHHhcCc---------------------c-hhHHHHHHHHHHHh----chheEEEEec
Confidence 97 99999999999999988887765320 0 12235666777653 3345678899
Q ss_pred cCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 175 SDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 175 ~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
.|.+|... |+.+.|.-..+..||+++.|.+. ...+ .+-..+..+...+++++.+...+
T Consensus 460 PEVyPTav------RatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 460 PEVYPTAV------RATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred Ccccchhh------hhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHhee
Confidence 99999999 99999999999999999999998 3333 33333444444455555544333
No 214
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.69 E-value=4.5e-07 Score=98.02 Aligned_cols=166 Identities=14% Similarity=0.027 Sum_probs=117.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
.|.++.++...++.....+......+.|.+..++ +....+.+.+...++..++.++.++++||+ |+|+++.++..+.+
T Consensus 230 n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~ 307 (473)
T PRK10429 230 NDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPV 307 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHH
Confidence 3666666777777777766666655544443443 556666777777788889999999999998 99999998887766
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCch-HHHhHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK-EEKAMI 190 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~-~~~~r~ 190 (573)
++.+...+..-.+ ..+.+.+++.-++.|++.+...+...++++|..+.++-+ .+...|
T Consensus 308 ~~~~~~~~~~~~~---------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G 366 (473)
T PRK10429 308 LSCGVLLLMGLAA---------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCES 366 (473)
T ss_pred HHHHHHHHHhccC---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchh
Confidence 6655543321000 024556666677788999988888899999987744211 011145
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
..++.+.+...+|..+|+.+.|++.+..|+
T Consensus 367 ~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 367 IAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 578889999999999999999998876665
No 215
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.7e-08 Score=103.59 Aligned_cols=146 Identities=20% Similarity=0.256 Sum_probs=119.2
Q ss_pred cccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Q 008231 372 PSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFW 451 (573)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 451 (573)
..+.++....+...++.|+++.+.+|.=|++. +.+|..+..++.+..++.. .+|.
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v-----------~~vG~~iW~~Av~~~~fs~--------------~Fwq 123 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYNRKRV-----------IAVGIFIWTLAVFASGFSN--------------HFWQ 123 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcCcceE-----------EeeHHHHHHHHHHHHHHHH--------------HHHH
Confidence 45677888888889999999999766544432 7889999999988877753 6788
Q ss_pred HHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHH
Q 008231 452 LVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYW 531 (573)
Q Consensus 452 lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~ 531 (573)
+++.-.+.|+|++.+.|...+++.|.+|+..|++..++++++..+|+.+|....+++.+.+. .| .+.|+
T Consensus 124 ~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-~W----------r~af~ 192 (493)
T KOG1330|consen 124 VLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-WW----------RWAFR 192 (493)
T ss_pred HHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-ce----------EEEEE
Confidence 88899999999999999999999999999999999999999999999999888888765442 13 24567
Q ss_pred HHHHHHHHHHHHHHHHHhhcch
Q 008231 532 LLAVLGLLNFMVFLFFAMKHQY 553 (573)
Q Consensus 532 ~~a~~~~l~~~~~~~~~~~~~~ 553 (573)
+.++++++.+++..++.++..+
T Consensus 193 ~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 193 GSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred eehHHHHHHHHHHHhhccCccc
Confidence 7788888888877777766544
No 216
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.64 E-value=9.8e-07 Score=84.08 Aligned_cols=93 Identities=16% Similarity=0.148 Sum_probs=68.0
Q ss_pred HHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccccc
Q 008231 58 TYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRK 137 (573)
Q Consensus 58 ~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (573)
.|+-+..++...+.|.+...-.....+...+.|-|+|+- |||+..+.-.+.+ +++.+....
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitY----iLsCiTKhS-------------- 121 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITY----ILSCITKHS-------------- 121 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHH----HHHHHhhcC--------------
Confidence 466678899999999888777778888888999999997 9999766554444 444443221
Q ss_pred ccccccchhhHHHHHHHHHHHHHhcCccccccccc-cccCCC
Q 008231 138 HHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSG-FGSDQF 178 (573)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~-~~~~~~ 178 (573)
+++-.++++|.+.|+..+...+..-+ ++.|.-
T Consensus 122 ---------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 122 ---------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred ---------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 24557899999999988887766655 445544
No 217
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.63 E-value=2.1e-07 Score=96.62 Aligned_cols=141 Identities=13% Similarity=0.012 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+.+.+..++.....+++..+.+.|+++.+|++..+.+.+.+.+.+...++.+++|+++||+ |||+.+..+..+.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 345555555555566677888899999999999999999999999999999999999999998 9998888777766666
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
..+..+....+ .+.....+...+.+++.+...+...+++++..| ++ ++.+.
T Consensus 305 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~ 355 (366)
T TIGR00886 305 AFLVVLGLVSP----------------------LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVS 355 (366)
T ss_pred HHHHHhcCCCc----------------------chHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHH
Confidence 65555432100 033344444444555555555666677788776 35 89999
Q ss_pred HHHHHHHHhhh
Q 008231 194 NRFYFAISIGS 204 (573)
Q Consensus 194 ~~~~~~~~ig~ 204 (573)
|+.+...++|+
T Consensus 356 g~~~~~~~~g~ 366 (366)
T TIGR00886 356 GLVGAIGNLGG 366 (366)
T ss_pred HHHHHhccCCC
Confidence 99888877763
No 218
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.63 E-value=2.8e-07 Score=95.67 Aligned_cols=180 Identities=12% Similarity=0.006 Sum_probs=139.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---CCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLH---LSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFA 107 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 107 (573)
+.|.+|.+.+........|+..-.-.+.|.+..++ .+....|.+.++..+.-.+.-.+..++.+|+ |.|+.++++.
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag 296 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAG 296 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHH
Confidence 33566666555555444455544456777775443 3445678888888888899999999999998 9999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 108 SVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
.+.++=..++++++ +.+.+.+.+.+.|+-.+........++++.+|++.
T Consensus 297 ~i~~iRi~~~~~~~--------------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl----- 345 (412)
T PF01306_consen 297 VIMAIRIIGSGFAT--------------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL----- 345 (412)
T ss_dssp HHHHHHHHHHHT----------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG-----
T ss_pred HHHHHHHHHHhhhc--------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH-----
Confidence 99999888988874 57788999999999999999999999999999887
Q ss_pred hHHHHHHH-HHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 188 AMIFFFNR-FYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 188 ~r~~~~~~-~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
.++...+ .+.+..+|..+.+.++|++.|..|.+..|++.+.++++..++-.+..+
T Consensus 346 -sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 346 -SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp -HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 7788887 567889999999999999999999999998877776666555555444
No 219
>PRK09669 putative symporter YagG; Provisional
Probab=98.55 E-value=1.1e-06 Score=94.20 Aligned_cols=161 Identities=13% Similarity=0.051 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
..+.++...++...+..... .+..|+.++.--+....+.+.....+...++.+++++++||+ |||+.+.++..+.+++
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 230 QWRIMFIFNVVLLTAVVTRG-GATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVIL 307 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHh-hhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 34444444444444443333 344454433222333344455556677778889999999998 9999999887766554
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCch-HHHhHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK-EEKAMIFF 192 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~ 192 (573)
.....+.. + .+.+.+++..++.|++.+...+...++++|..+.++.+ -+...+..
T Consensus 308 ~~~~~~~~--~----------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~ 363 (444)
T PRK09669 308 SALIFFIP--P----------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLV 363 (444)
T ss_pred HHHHHHhC--c----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHH
Confidence 43333221 1 35566777778899999999999999999988744311 01124667
Q ss_pred HHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 193 FNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 193 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
++.+++...+|..+|+.++|++.+..|+
T Consensus 364 ~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 364 FSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8889999999999999999998877666
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.51 E-value=5e-06 Score=87.44 Aligned_cols=139 Identities=11% Similarity=-0.109 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHH---HHhhccCCC
Q 008231 49 AMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGL---LTSATSIPS 125 (573)
Q Consensus 49 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~---~~~~~~~~~ 125 (573)
........+.|+++.+|.+..+.+++......+..++.++.+++.||+ +++... +.....++.+. ..... .
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~--~- 296 (394)
T PRK11652 223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG--V- 296 (394)
T ss_pred HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc--c-
Confidence 333345567788888999999999988888888888889999999998 743332 22222222221 11110 0
Q ss_pred CCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhH
Q 008231 126 MRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSL 205 (573)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 205 (573)
.+.+.++++..+.++|.+...|...++..|.+|+ + ++...++.+...++|+.
T Consensus 297 ---------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~ 348 (394)
T PRK11652 297 ---------------------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSG 348 (394)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHH
Confidence 1344566677888999998889999988888873 4 78889999989999999
Q ss_pred HHHHHhhhhhcccchh
Q 008231 206 FAVIVLVYVQDNVGRG 221 (573)
Q Consensus 206 ~~~~~~~~l~~~~g~~ 221 (573)
+++.+++++.+...+.
T Consensus 349 ~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 349 LAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHccCCchHH
Confidence 9999999887654343
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.51 E-value=2e-06 Score=91.11 Aligned_cols=162 Identities=9% Similarity=-0.080 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGD-LHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+......++-.....+..++++.|+.+. .+.+....+...+.+.....++.+++|++.||+ ++|+++.++..+.++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 34444455554444446778889998753 245555556667777788899999999999998 9999988888877777
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.++..+.. +. .......+.|++.+..+|+..++..+..+++. +....
T Consensus 313 ~ll~~~~~--------------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s~ 359 (410)
T TIGR00885 313 CLGSIFAG--------------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGAA 359 (410)
T ss_pred HHHHHHcC--------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHH
Confidence 77766642 11 12345566778888888999999999888654 32233
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhccc------chhHHHHHHHHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNV------GRGWGYGISAGTMV 232 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~------g~~~~f~~~~~~~~ 232 (573)
.+ .++ .+|+.+.|.+.|++.|.. |.+..|.++..+.+
T Consensus 360 ~l-~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 360 GL-VMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HH-HHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 33 223 399999999999999954 47788887766544
No 222
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.50 E-value=2.1e-06 Score=75.21 Aligned_cols=133 Identities=22% Similarity=0.328 Sum_probs=93.1
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHH
Q 008231 378 AFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYF 457 (573)
Q Consensus 378 ~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 457 (573)
....++.++..+..+++.|+..||+ .+..+..+..++.+..... .+.+.+....+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~-----------~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 59 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKP-----------VLLVGLFIFVLSTAMFALS--------------SNITVLIIARF 59 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhH-----------HHHHHHHHHHHHHHHHHHh--------------ccHHHHHHHHH
Confidence 3445666677778888776655442 2455555555665554432 13455566778
Q ss_pred HHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHH
Q 008231 458 LVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLG 537 (573)
Q Consensus 458 l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~ 537 (573)
+.+++.....+....++.|..|++.|++..++.++...+|..+++.+.+.+.+.. + ....+++.+.+.
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~ 127 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL--G----------WRAPFLFLAILA 127 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc--c----------hHHHHHHHHHHH
Confidence 8889888888999999999999999999999999999999999999999886432 1 234555666665
Q ss_pred HHHHHHHHHH
Q 008231 538 LLNFMVFLFF 547 (573)
Q Consensus 538 ~l~~~~~~~~ 547 (573)
++..+..+.+
T Consensus 128 ~~~~~~~~~~ 137 (141)
T TIGR00880 128 LAAFILLAFL 137 (141)
T ss_pred HHHHHHHhhc
Confidence 5555544443
No 223
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.50 E-value=1.6e-06 Score=88.97 Aligned_cols=166 Identities=13% Similarity=0.080 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHHHHHH-HH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAK---LGRYLTVAIF-AS 108 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~~-~~ 108 (573)
+.++......+.-.+++-.=.+++++|++ .+|++.+..+.+-..-.+.+.+.+|+-|..+||. +||||-++.. ..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56666667777777776666778888877 8899999999888888899999999999999983 3888776655 45
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA 188 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
..+++.++..++.. +...-||+-+++ ..+.....++++.-+.=+..-.....+-+++.|....++
T Consensus 111 ~i~~~l~Lig~aaD---ig~~lgd~~~~~------~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~------ 175 (498)
T KOG0637|consen 111 LIAVSLFLIGYAAD---IGLLLGDNERKP------VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA------ 175 (498)
T ss_pred HHHHHHhhhhhHhh---hhHHhcCCcccc------cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh------
Confidence 56667777777643 223334443321 112345566777777777777888888999999987666
Q ss_pred HHH-HHHHHHHHHHhhhHHHHHHhhhh
Q 008231 189 MIF-FFNRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 189 r~~-~~~~~~~~~~ig~~~~~~~~~~l 214 (573)
+-+ +.+++.....+|+.+|...++++
T Consensus 176 ~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 176 KKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhhccchhHHHHHHhcceeeeeccccc
Confidence 333 88888889999999998887744
No 224
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.43 E-value=2.8e-06 Score=91.83 Aligned_cols=186 Identities=8% Similarity=-0.057 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchh----hhHHHHHHHHHHHHHHhHHH----HHhhhccchhHH--HH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVGDLHLSSAK----SATIVTNFMGTLNLLGLLGG----FLADAKLGRYLT--VA 104 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~----~~~~~~~~~~~~~~~~~~~G----~laDr~~Grr~~--~~ 104 (573)
+..++....+.+..+.-..+.++.|..+..+.+... .+++.+...+...+.+++.. ++.||..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 344444445555666666677788877765554322 56777777777777766644 455542133333 36
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCch
Q 008231 105 IFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPK 184 (573)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
+|+++.+++.+.++++.... +.....+.+.+.+..++.++|.....|...+++.+..|++.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~-----------------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~-- 414 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA-----------------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL-- 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc-----------------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH--
Confidence 78888888877776531110 00112477888999999999999999999999999999988
Q ss_pred HHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCc
Q 008231 185 EEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTP 243 (573)
Q Consensus 185 ~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 243 (573)
|++.+|++..+..+|..+++.+.....+..+|...|...++.+++..++.++..|
T Consensus 415 ----~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 ----MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888777677887777666655555444444333
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.40 E-value=5.8e-06 Score=86.88 Aligned_cols=162 Identities=15% Similarity=0.029 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
|.+..++...++...++....+....|.+..+|.++.+..+..........++.++..++++|+ |+|+++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 4455555556666666555555566677778888888888888888888888899999999998 999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHh--HH
Q 008231 113 VVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKA--MI 190 (573)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~--r~ 190 (573)
+.++..+... .+...+++...+.++|.+...+..+++++|..+-.| -+.+. -|
T Consensus 315 ~~~~~~f~~~------------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge-~~TG~R~eG 369 (467)
T COG2211 315 GYLLLYFTPA------------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGE-WKTGVRREG 369 (467)
T ss_pred HHHHHHhhcC------------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHH-HHhCCCchh
Confidence 9999888631 467788888899999999999999999999876543 22222 35
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
..++.+.+..=+|..++..+.|++.+..|+
T Consensus 370 i~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 370 IVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 566778888888999888888887766554
No 226
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.36 E-value=2e-05 Score=76.73 Aligned_cols=154 Identities=15% Similarity=0.051 Sum_probs=107.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 008231 32 WLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 111 (573)
|-.+...+....... ..|.. +.-.+.+++.+|+|.+|...+...-.++..+ .++.|.+.|++ |.+.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcC-cccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHH
Confidence 444333344433332 33443 4455688999999999999999888888886 48889999998 99999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
+|..++.++-+-. -.....+.+.+..++.+.+...+.........+.||+ + ||.
T Consensus 78 ~GY~~~~l~~~~~-------------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~ 131 (250)
T PF06813_consen 78 VGYGLLWLAVSGR-------------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGT 131 (250)
T ss_pred HHHHHHHHHHhCc-------------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCc
Confidence 9998887753211 0113556677777777777666655555555678884 5 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhh
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQ 215 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~ 215 (573)
+.++.-....+++.+-..+-..+.
T Consensus 132 vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 132 VVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred eehhhhHHHHhHHHHHHHHHHHHc
Confidence 999977777776665544444333
No 227
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.36 E-value=0.00014 Score=75.34 Aligned_cols=157 Identities=14% Similarity=0.009 Sum_probs=110.9
Q ss_pred HHHHHHHHHhhh-cCCCchhhh-HHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 008231 52 ISMNLVTYLVGD-LHLSSAKSA-TIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPP 129 (573)
Q Consensus 52 ~~~~l~~yl~~~-~~~s~~~~~-~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (573)
.-+++.+|+.+. .|++..|.. -+.-+..-.+....++...+.|.. +.|++++++.+...+...++.+..
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~-------- 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT-------- 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC--------
Confidence 346788999876 999999886 455556667777888889999997 999999999888887777777653
Q ss_pred CCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHH
Q 008231 130 QCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVI 209 (573)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 209 (573)
+...+-+.-++.|++.+.. .+..+++-...|+++ --++.+....+.-+|-.++.+
T Consensus 93 ------------------sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~ 147 (412)
T PF01770_consen 93 ------------------SVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSL 147 (412)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 5567777788888877774 445566666666655 566666667777777777766
Q ss_pred Hhhhhhc--ccchhHHHHHHHHHHHHHHHHHHhcC
Q 008231 210 VLVYVQD--NVGRGWGYGISAGTMVVAAAILLIGT 242 (573)
Q Consensus 210 ~~~~l~~--~~g~~~~f~~~~~~~~~~~~~~~~~~ 242 (573)
++-.+.. ..++....+++.....+++++.++.+
T Consensus 148 lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 148 LGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6655443 33466677777766666665544433
No 228
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.35 E-value=1.1e-05 Score=79.90 Aligned_cols=152 Identities=22% Similarity=0.176 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCc--hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCC
Q 008231 47 ICAMGISMNLVTYLVGDLHLSS--AKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIP 124 (573)
Q Consensus 47 ~~~~~~~~~l~~yl~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 124 (573)
..........+.+ ..+++.+. .+.+++.+.+.+...++.++.|+++||+ |||+.+..+.....++.+++.+..+
T Consensus 16 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-- 91 (338)
T COG0477 16 LDLGLLSPALPLL-LSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN-- 91 (338)
T ss_pred HhcchHHHHHHHH-HHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc--
Confidence 3333333344444 33555555 5789999999999999999999999998 9998888888765666566665431
Q ss_pred CCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCC-CCchHHHhHHHHHHHHHH-HHHh
Q 008231 125 SMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDT-SDPKEEKAMIFFFNRFYF-AISI 202 (573)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~i 202 (573)
.....+++.|++.|++.+...+...+++.|..|+ +. |+...+.... ...+
T Consensus 92 ----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 143 (338)
T COG0477 92 ----------------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGAL 143 (338)
T ss_pred ----------------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHH
Confidence 2467888899999999999999999999999987 44 8998888777 5888
Q ss_pred hhHHHHHHhhhhhcc--cchhHHHHHHHHH
Q 008231 203 GSLFAVIVLVYVQDN--VGRGWGYGISAGT 230 (573)
Q Consensus 203 g~~~~~~~~~~l~~~--~g~~~~f~~~~~~ 230 (573)
|..++|.+++.+... .+|++.|.+....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 144 GLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 888898777766543 5688866555443
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.34 E-value=1.1e-06 Score=88.74 Aligned_cols=148 Identities=22% Similarity=0.241 Sum_probs=122.6
Q ss_pred eecccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Q 008231 370 TVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISA 449 (573)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 449 (573)
+...+++.+.-.+..++..|+++.+.++++.|.- +.+|+..+..+.+++++.+ +.
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip-----------m~~Gl~vmf~sTilFafg~--------------sy 159 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP-----------MVAGLFVMFLSTILFAFGN--------------SY 159 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccccH-----------HHHHHHHHHHHHHHHHHcc--------------hh
Confidence 5566778888889999999999999887776642 8999999999999998864 45
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhheeecccCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhH
Q 008231 450 FWLVPQYFLVGAGEAFVYVGQLEFFIREGPERM-KSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNN 528 (573)
Q Consensus 450 ~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~-rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~ 528 (573)
+.+++.-.++|+|.++......+++.+.+|++. ||+++|+...+.++|..+||.++|.+++..+ ...
T Consensus 160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G------------k~a 227 (464)
T KOG3764|consen 160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG------------KSA 227 (464)
T ss_pred HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC------------CcC
Confidence 578889999999999999999999999999765 6999999999999999999999999988643 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchh
Q 008231 529 FYWLLAVLGLLNFMVFLFFAMKHQYN 554 (573)
Q Consensus 529 ~~~~~a~~~~l~~~~~~~~~~~~~~~ 554 (573)
.|.+++.++++-..+-++..+.++..
T Consensus 228 PFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 228 PFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred cHHHHHHHHHHHHHHHHheeCccccC
Confidence 68888888888877766665544433
No 230
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.32 E-value=1.6e-05 Score=84.40 Aligned_cols=169 Identities=12% Similarity=-0.026 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.++......++....++......|.++++.+|.+..+.++.......+..++..+.+++.++. ++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4566666666667777777777889999999999999999998878888888888888876554 444444333333344
Q ss_pred HHHHHHhhcc-CCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 113 VVGLLTSATS-IPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 113 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
+..++..... .+ .+....+++.++.++|.+...|+..+..- .+.+.+ +++
T Consensus 297 g~~l~~~~~~~~~----------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~ 347 (413)
T PRK15403 297 GLALLIVGNLLWP----------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGT 347 (413)
T ss_pred HHHHHHHHHHHcc----------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcH
Confidence 4433332210 01 12333566777888888888777764322 222211 677
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHH
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMV 232 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~ 232 (573)
+.++++.....+...++..++++.+. +-.++|....+...
T Consensus 348 a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 348 VSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 88888888888888888888888664 55666665544433
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.28 E-value=1.8e-05 Score=81.11 Aligned_cols=171 Identities=18% Similarity=0.176 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 008231 39 LGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLT 118 (573)
Q Consensus 39 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 118 (573)
+...++..+++++==..+-+|--+.+|++..|...+.+.+..+..++-...|++..|..+++++..+++.+.+++..+..
T Consensus 214 ~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 214 FVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII 293 (403)
T ss_pred HHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 33333444454444456777888899999999999999999999999999999988655888888899988888887776
Q ss_pred hhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHH
Q 008231 119 SATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYF 198 (573)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 198 (573)
++... .+.+.+..+.++.|++.|.+.....+...|+..+++ .|..+|.+..
T Consensus 294 ~a~~~-----------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGa 344 (403)
T PF03209_consen 294 LAGPL-----------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGA 344 (403)
T ss_pred HHHhc-----------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHH
Confidence 65422 256788999999999999999888899999998887 8999999999
Q ss_pred HHHhhhHHHHHHhhhhhcc----------cchhHHHHHHHHHHHHHHHHH
Q 008231 199 AISIGSLFAVIVLVYVQDN----------VGRGWGYGISAGTMVVAAAIL 238 (573)
Q Consensus 199 ~~~ig~~~~~~~~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~ 238 (573)
+..+...+|..++|.+.|. .+|..+|.+-++..+++.++.
T Consensus 345 aQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 345 AQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888876542 246677777777666655543
No 232
>PRK11462 putative transporter; Provisional
Probab=98.24 E-value=3e-05 Score=83.41 Aligned_cols=160 Identities=11% Similarity=0.014 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
....++...++..............|.+..+| +....+.+...+.+...++.+++++++||+ |+|+++..+..+..+.
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~ 306 (460)
T PRK11462 229 QWRIVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVI 306 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 33444444444444443333333333333344 333445667778888889999999999998 9998877555544443
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH--HH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM--IF 191 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~ 191 (573)
..+..+... .+...+++..++.|++.+...+...++++|..+.++ -+.+.| +.
T Consensus 307 ~~~~~~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e-~~tG~r~~g~ 361 (460)
T PRK11462 307 SLAMFFVPM------------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGE-WCNGKRLTGI 361 (460)
T ss_pred HHHHHHhch------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH-HhcCCCchHH
Confidence 333322210 122233444456677777777766778888766332 222224 34
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhcccch
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQDNVGR 220 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 220 (573)
.++.+.+...+|..+|+.++|++.+..|+
T Consensus 362 ~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 362 SFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45667788899999999998887765554
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.20 E-value=2.3e-05 Score=83.86 Aligned_cols=206 Identities=11% Similarity=-0.073 Sum_probs=142.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCCch------h----hhHHHHHHHHHHHHHHhHHHHHhhhcc
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVG-DLHLSSA------K----SATIVTNFMGTLNLLGLLGGFLADAKL 97 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~------~----~~~~~~~~~~~~~~~~~~~G~laDr~~ 97 (573)
+.-.+.++.++.+.++.+++++.+..+.+.|+.+ .+|-++. + ..+....+.+...+.+++--++.+|+
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3455688999999999999999999999999875 3443321 1 12333444555556666777889888
Q ss_pred c-hhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccccccccc-ccchhhHHHHHHHHHHHHHhcCcccccccccccc
Q 008231 98 G-RYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQC-IEANGKQLAMLYAALYTIALGGGGIKSNVSGFGS 175 (573)
Q Consensus 98 G-rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~ 175 (573)
| ||++..++.++.+++.....+.++.+.-. ++ ...++. ..++....+..++...+.|+..+.....-.++++
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s 406 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNS-----RY-YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALAS 406 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhcc-----cc-ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHH
Confidence 8 47777889888888887776543211000 00 000000 1111122466777778899999999999999999
Q ss_pred CCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc--hhHHHHHHHHHHHHHHHHHHhcCccc
Q 008231 176 DQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG--RGWGYGISAGTMVVAAAILLIGTPWY 245 (573)
Q Consensus 176 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~~ 245 (573)
+..+++..+ .|..+|+.|.++.+...+..+..|.+.+..| -.+++.+.++.++++.+..++..|+.
T Consensus 407 ~~~~~~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 407 IRSSNLGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred HHccccCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999965422 6999999999999999999988888666555 45677888888888887777766643
No 234
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.18 E-value=4.8e-05 Score=80.02 Aligned_cols=111 Identities=13% Similarity=0.014 Sum_probs=92.4
Q ss_pred ccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Q 008231 373 SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWL 452 (573)
Q Consensus 373 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l 452 (573)
.+.+......+..++....+++.|+++-|+ .+..+++..++..+++++.. +++.+
T Consensus 64 ~G~I~s~F~ysYal~qIp~GlLaDrlG~K~-----------vL~l~~l~Wsl~t~L~~fa~--------------Sl~~L 118 (511)
T TIGR00806 64 TNEIIPVLPYSHLAVLVPVFLLTDYLRYKP-----------VLVLQALSFVCVWLLLLLGT--------------SVWHM 118 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCchH-----------HHHHHHHHHHHHHHHHHHHH--------------HHHHH
Confidence 556677777888888888888877765553 36777777777777777653 56778
Q ss_pred HHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008231 453 VPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVD 509 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~ 509 (573)
.+.-++.|++++... ..+.++...+|++.|++++|+.+....+|.++++.+++.+.
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999 99999999999999999999999999999999999999843
No 235
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.17 E-value=3.1e-05 Score=78.81 Aligned_cols=156 Identities=14% Similarity=0.088 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.++...++.|+-.-.--.+.++++.|+.+..|++..+++..++.+..+..++..++-++..|+ ...|.+.+..++..+-
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill 315 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILL 315 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344444454544433445668899999988999999999999999999999999999999998 7788877776655555
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
++..+++. +. .-+.+.++.|+..+...|+..+...+..|++.+ .+
T Consensus 316 ~~~~~l~~--------------------------g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~~--- 360 (422)
T COG0738 316 LLAVALIG--------------------------GV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----VG--- 360 (422)
T ss_pred HHHHHHhc--------------------------Ch-HHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----cc---
Confidence 55555542 22 233345678999999999999999999984431 22
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccchhHHHH
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVGRGWGYG 225 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~ 225 (573)
|..-....+|+.+-|.+-|++.|..|-...+.
T Consensus 361 s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 361 SGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred ceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 22223456889999999999999999887766
No 236
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.16 E-value=0.004 Score=64.65 Aligned_cols=61 Identities=20% Similarity=0.224 Sum_probs=50.5
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 448 SAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 448 ~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
+.|.+++..+..|+..+..+...+..+.+..|++.|..++|.....-++|..+++.+.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4566666777888888888888888899999999999999999999888888887775444
No 237
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.16 E-value=3.1e-05 Score=84.23 Aligned_cols=173 Identities=13% Similarity=-0.030 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHhh--hcCCCc------hhhhHHHHHHHHHHHHHHhHH----HHHhhhccchhHHHHHHHHHHH
Q 008231 44 SERICAMGISMNLVTYLVG--DLHLSS------AKSATIVTNFMGTLNLLGLLG----GFLADAKLGRYLTVAIFASVTA 111 (573)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~--~~~~s~------~~~~~~~~~~~~~~~~~~~~~----G~laDr~~Grr~~~~~~~~~~~ 111 (573)
+....+|.+..-.+.++.. ..+.+. ...+++.+...+...++.++. +++.||+ +..+.+.+++++.+
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~ 361 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHH
Confidence 4445566666666666543 111111 224555566665555565555 6667776 77788999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHH
Q 008231 112 LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIF 191 (573)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 191 (573)
++.+.++++..... .....+.+.+.+..++.|+|.....|...+++.+..|++. |++
T Consensus 362 l~f~~l~~~~~~~~-----------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~ 418 (500)
T PRK09584 362 GAFLVLPLGAKFAN-----------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGF 418 (500)
T ss_pred HHHHHHHHHHHhcC-----------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHH
Confidence 99888877643210 0011345578888999999999999999999999999988 999
Q ss_pred HHHHHHHHHHhhhHHHHHHhhhhhc----------ccchhHHHHHHHHHHHHHHHHHHh
Q 008231 192 FFNRFYFAISIGSLFAVIVLVYVQD----------NVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 192 ~~~~~~~~~~ig~~~~~~~~~~l~~----------~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
.+|.+..+..+|..++..+.+.... ..++.+.|...++..++..++++.
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888887877777666643221 123566776555544433333333
No 238
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.11 E-value=2.2e-05 Score=84.99 Aligned_cols=149 Identities=9% Similarity=-0.034 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCc----hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-------HHHHHHHHH
Q 008231 42 ELSERICAMGISMNLVTYLVGDLHLSS----AKSATIVTNFMGTLNLLGLLGGFLADAKLGRYL-------TVAIFASVT 110 (573)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~~~~s~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-------~~~~~~~~~ 110 (573)
..+....+......++.|.++..+.+. ...+++.+...+...+..++.|++.||+ |+|+ -+.+|+++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 334445555555677777775333321 1234555556666778888899999998 8887 377777777
Q ss_pred HHHHHHHHhhcc-CCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhH
Q 008231 111 ALVVGLLTSATS-IPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAM 189 (573)
Q Consensus 111 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 189 (573)
+++.+.++.... ... .....+.+.+...-++.|+|.+...|...+++.+..|++. +
T Consensus 357 ~~~~~~~~~~~~~~~~-----------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~ 413 (489)
T PRK10207 357 SLGFLTAAAAGMWFAD-----------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------M 413 (489)
T ss_pred HHHHHHHHHHHHhhcC-----------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------H
Confidence 777654432110 000 0001245666777888999999999999999999999988 9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhh
Q 008231 190 IFFFNRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 190 ~~~~~~~~~~~~ig~~~~~~~~~~l 214 (573)
+.++++++...++|..+|..++...
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998887655
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.06 E-value=2.7e-05 Score=61.20 Aligned_cols=66 Identities=21% Similarity=0.045 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 008231 42 ELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 109 (573)
-++...+...+.++++.|++ +.|+|..|.|.+.++..+...++++++|+++||+ ||++.++....+
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 34444555567888999988 5899999999999999999999999999999998 888887766544
No 240
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.05 E-value=0.027 Score=59.56 Aligned_cols=188 Identities=14% Similarity=-0.028 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+..+.+....++..++--+..-..+.|+.+-+.-+-.-.+..--.-.+...+..+.-|.+.||. .|.+++..+..+--+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNL 80 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHH
Confidence 3456677777777777666666677788766443333333333334556667778889999998 899887776554332
Q ss_pred HH----HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHH-HHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 113 VV----GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYA-ALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 113 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
+. .+....-..+.. ..+ +. .....+++ ..++..+..=.......+.=.||...-..+++.
T Consensus 81 sv~~s~~~~~~l~~~~~~-----------~~~---~~-~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~ 145 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSS-----------SSQ---SS-WLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPG 145 (432)
T ss_pred HHHHHHHHHHHHHhCCcc-----------ccc---cc-hHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChh
Confidence 22 222211111100 000 01 11222222 222222222222222333334443221111112
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHH
Q 008231 188 AMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAA 236 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 236 (573)
.+.+..+...-.--+.-++||++.|.+....|.+....+.++..++++.
T Consensus 146 ~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 146 ALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVF 194 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 2677777777777888999999999999888888776666655555544
No 241
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.04 E-value=7.1e-05 Score=80.45 Aligned_cols=134 Identities=13% Similarity=0.114 Sum_probs=86.7
Q ss_pred ccchhhHHHHHHHHHhhhhhhhhh-hcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Q 008231 375 SLSAFLFITILLFTSLNEKVFVPL-ARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLV 453 (573)
Q Consensus 375 ~~~~~~~~~~l~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv 453 (573)
.+.........+...+.+++.||+ +||+ .+..|.++..++.+++.... . ....+.
T Consensus 49 ~i~~~~~~~~~l~~ligG~LaDRilGrrr-----------~iliG~il~~lg~lll~~~~------------~-~~~~~~ 104 (493)
T PRK15462 49 ELFSAYCSLVYVTPILGGFLADKVLGNRM-----------AVMLGALLMAIGHVVLGASE------------I-HPSFLY 104 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHH-----------HHHHHHHHHHHHHHHHHHhh------------c-chhHHH
Confidence 344444455556667788888887 5553 26778777777766554321 0 111223
Q ss_pred HHHHHHHHHHHhhhhhhhheeecccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHH
Q 008231 454 PQYFLVGAGEAFVYVGQLEFFIREGPER--MKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYW 531 (573)
Q Consensus 454 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~--~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~ 531 (573)
....+..+|.++..+...+++.|.+|++ .|.++.++.....++|+.++|.+.+++.+.. +| ...|.
T Consensus 105 l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~--Gw----------~~~F~ 172 (493)
T PRK15462 105 LSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY--SW----------AMGFG 172 (493)
T ss_pred HHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh--Ch----------HHHHH
Confidence 3344455666666677778899999875 7999999999999999999999999987532 23 34565
Q ss_pred HHHHHHHHHHHHH
Q 008231 532 LLAVLGLLNFMVF 544 (573)
Q Consensus 532 ~~a~~~~l~~~~~ 544 (573)
+.++..+++.+.+
T Consensus 173 iaaigm~l~li~~ 185 (493)
T PRK15462 173 LAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 5555444444443
No 242
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.03 E-value=1.9e-05 Score=82.75 Aligned_cols=169 Identities=9% Similarity=-0.070 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 008231 38 ILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLL 117 (573)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 117 (573)
.++..+....+.-.+.+++--+++ +++-.+.-.|.....-..+-.+.-++.+++..++ |+-+++..++++.++=....
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHH
Confidence 344555555555556666654544 6676666677555555666677778889999998 99999999999999888888
Q ss_pred HhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHH
Q 008231 118 TSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFY 197 (573)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 197 (573)
+... |.|+.+..-+++|+..+.++.++.++++...|++. |..+.++..
T Consensus 454 S~L~--------------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~ 501 (618)
T KOG3762|consen 454 SYLQ--------------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQ 501 (618)
T ss_pred HHhc--------------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHH
Confidence 8763 67888889999999999999999999999999999 899998855
Q ss_pred H-HHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHh
Q 008231 198 F-AISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 198 ~-~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
. -..+|-.+|.+++|.+.+.+|-+..|.+.++.+++.++....
T Consensus 502 g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 502 GIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 5 448899999999999999999888888777766665554333
No 243
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.03 E-value=1.4e-05 Score=86.19 Aligned_cols=136 Identities=7% Similarity=-0.216 Sum_probs=107.0
Q ss_pred hhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccc
Q 008231 61 VGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQ 140 (573)
Q Consensus 61 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (573)
.+.+|+++.+.|.+.+...++..++..+.+++.+|+ +.|+++.++.++.+++........+......
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~------------ 346 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAF------------ 346 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccccc------------
Confidence 457999999999999999999999999999999998 9999999999888887755432211010000
Q ss_pred cccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc
Q 008231 141 CIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG 219 (573)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g 219 (573)
+ ..+.+.++...++.+++.+........++.+..|++. +++.+++++...++|..+++.+++++.+..|
T Consensus 347 g----i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 347 G----ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred C----CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 0112234444567777778877888999999999998 9999999999999999999999999988777
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.01 E-value=3.4e-05 Score=82.80 Aligned_cols=165 Identities=16% Similarity=0.082 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhh----ccchhHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADA----KLGRYLTVAIFAS 108 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~~~~~~~~ 108 (573)
+.+|..++..++.....|++..++|.|+.+..|+|..+++.+...+.+++.++.++.|+++|| . .+|......+.
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~ 351 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLC 351 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHH
Confidence 467889999999999999999999999998778999999999999999999999999999999 5 67777666665
Q ss_pred HHHHHH-HHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 109 VTALVV-GLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 109 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
++.+.. ..+..... ......+.+....+.....+......++....+. +
T Consensus 352 ~~~~~g~~~l~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-k--- 401 (495)
T KOG2533|consen 352 LYAIIGAISLLAAAV--------------------------LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-K--- 401 (495)
T ss_pred HHHHHHHHHHHhhcc--------------------------chHHhHHHHhcchhhHHHHHHHHhhccccccchH-H---
Confidence 554433 33333211 1122222223333344444555666666665443 1
Q ss_pred hHHHHHHHHHH-HHHhhhHHHHHHhhhhhcccchhHHHHHHHH
Q 008231 188 AMIFFFNRFYF-AISIGSLFAVIVLVYVQDNVGRGWGYGISAG 229 (573)
Q Consensus 188 ~r~~~~~~~~~-~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~ 229 (573)
|-...+.+.. ....|.+.+++.-+.....++|.+.|.....
T Consensus 402 -~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 402 -ALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred -hHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 4444444333 3444555555555666666788888854433
No 245
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.99 E-value=7.1e-08 Score=103.43 Aligned_cols=186 Identities=16% Similarity=0.020 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVG 115 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 115 (573)
...+.......+..+....+..+++.+..+.+.. -.......+...++.+++.++.||+ |||++++.+..+.+++..
T Consensus 255 ~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~~~ 331 (451)
T PF00083_consen 255 LIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAICSL 331 (451)
T ss_pred cccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccccc
Confidence 3333333333333333333444555566677766 2222334455666777778999998 999999999888777776
Q ss_pred HHH-hhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHH
Q 008231 116 LLT-SATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFN 194 (573)
Q Consensus 116 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 194 (573)
.++ .....+.. +...+...+............+..+....+.+|.+|.+. |+++.+
T Consensus 332 ~~~~~~~~~~~~-----------------~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~ 388 (451)
T PF00083_consen 332 ILGIIFFLGVSS-----------------SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIG 388 (451)
T ss_pred cccccccccccc-----------------ccccccccceeeeeccccccccccccccccccccccccc------cccccc
Confidence 664 11000000 000011111111111122222444666688899999999 999999
Q ss_pred HHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHhcCccccc
Q 008231 195 RFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRF 247 (573)
Q Consensus 195 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 247 (573)
+.+....+++++++.+...+.+..+-...+.+.+..+++..+..++..||.+.
T Consensus 389 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 389 LSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred cccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 99888899999999888888877763445555555555556555666665543
No 246
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.95 E-value=9.4e-05 Score=82.66 Aligned_cols=129 Identities=15% Similarity=0.146 Sum_probs=95.9
Q ss_pred cccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHH----Hh---------
Q 008231 372 PSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQR----RE--------- 438 (573)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~----~~--------- 438 (573)
..+++.+...++.++...+.+++.+|..||+. +..|.++++++.++.++..... ..
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~-----------i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV-----------IGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcceE-----------EEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 45677778888888888888888766555433 6778888888887776642110 00
Q ss_pred ----hccc-----------------CC-c--ccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHH
Q 008231 439 ----TSVQ-----------------KH-I--QISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAI 494 (573)
Q Consensus 439 ----~~~~-----------------~~-~--~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~ 494 (573)
...+ .. . ...+..+++.-++.|+|.+...+...+++.|.+|++.|+.+.|+++...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 0000 00 0 1134556678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 008231 495 SMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 495 ~lg~~ig~~~~~~i~~~ 511 (573)
.+|..+|+.+++++.+.
T Consensus 218 ~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQI 234 (633)
T ss_pred HhhhHHHHHHHHHHHhc
Confidence 99999999999988753
No 247
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.94 E-value=0.0023 Score=64.57 Aligned_cols=158 Identities=14% Similarity=0.022 Sum_probs=93.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhh-----hccchhHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLAD-----AKLGRYLTV 103 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD-----r~~Grr~~~ 103 (573)
+...+++..+++.-..+.+=+ +....+|..++ .-|.|-++.+...-+ .--+..-+++.++.| |+ ||||..
T Consensus 27 ~~d~~~illLl~LYllQGiP~-GL~~~iP~lL~-ak~vSyt~~a~fS~a--y~P~sLKllWaPiVDs~y~k~~-GrrksW 101 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQ-AKGVSYTSQAIFSFA--YWPFSLKLLWAPIVDSVYSKRF-GRRKSW 101 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCch-hHhhhhHHHhc-CCCcchhhhhhhhhh--hhHHHHHHHHHhhhHHHHHHhh-ccccce
Confidence 444557777777777776554 55565554444 668888776543222 223456788999999 88 999986
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCc
Q 008231 104 AIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDP 183 (573)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~ 183 (573)
++-. -+.+|.++..++...+. .+.+|...+ +...+....++.-+..+.-..++....-.+..+++
T Consensus 102 vvp~-q~llG~~mllLs~~v~~------------~~g~ng~~p-~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~- 166 (510)
T KOG3574|consen 102 VVPC-QYLLGLFMLLLSYLVDR------------GLGGNGGLP-NVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN- 166 (510)
T ss_pred eeeh-HHHHHHHHHHHhhCCCc------------ccccCCCCc-chHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh-
Confidence 6432 12334444444321111 011111121 22233333344445556666666777777777777
Q ss_pred hHHHhHHHHHHHHHHHHHhhhHHHHHHh
Q 008231 184 KEEKAMIFFFNRFYFAISIGSLFAVIVL 211 (573)
Q Consensus 184 ~~~~~r~~~~~~~~~~~~ig~~~~~~~~ 211 (573)
.+-+......+.+.|.+++..+.
T Consensus 167 -----lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 167 -----LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred -----cCchhHHHHHHHhhhHHhhccee
Confidence 88888888889999998886554
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.84 E-value=0.00049 Score=75.48 Aligned_cols=129 Identities=11% Similarity=0.080 Sum_probs=89.0
Q ss_pred HHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhh
Q 008231 388 TSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVY 467 (573)
Q Consensus 388 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~ 467 (573)
....+++.|++++|. .+.+|.++..++.++.++... .....+.+.+.+..++.|+|.+...
T Consensus 78 ~lp~G~L~Dr~G~R~-----------vllig~ll~~iG~ll~ala~~--------~~i~~s~~~l~l~r~l~G~G~~~~~ 138 (591)
T PTZ00207 78 LLPYSFIYDYLGPRP-----------IFVLSMTVFCLGTLLFALTFQ--------EVIEGSVVRLSVYNGLMTLGCMLFD 138 (591)
T ss_pred HHHHHHHHHHhCcHH-----------HHHHHHHHHHHHHHHHHHHhc--------ccccCcHHHHHHHHHHHHHHHHHHH
Confidence 334577777666553 378888888889888776421 1112356677778889999998888
Q ss_pred hhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 008231 468 VGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFF 547 (573)
Q Consensus 468 ~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 547 (573)
+.....+.+.+| +.||.+.|+......+|+.+.+.+...+... + ...++++++++.++..++.+.+
T Consensus 139 ~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~---~----------~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 139 LGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD---N----------TSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----------HHHHHHHHHHHHHHHHHHHHhh
Confidence 888888888887 6699999999999999998655544443321 1 2345666677766666655555
Q ss_pred Hh
Q 008231 548 AM 549 (573)
Q Consensus 548 ~~ 549 (573)
.+
T Consensus 205 vr 206 (591)
T PTZ00207 205 MR 206 (591)
T ss_pred ee
Confidence 44
No 249
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.83 E-value=4.4e-05 Score=78.73 Aligned_cols=179 Identities=12% Similarity=0.028 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhH----HHHHH----HHHHH-HHHhHHHHHhhhccchhHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSAT----IVTNF----MGTLN-LLGLLGGFLADAKLGRYLTV 103 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~----~~~~~----~~~~~-~~~~~~G~laDr~~Grr~~~ 103 (573)
+.+.-.+..+|+-.+++|+...+...-+ +..|+.+.+... -++.. ...+. .+..+..++.|+. |||+..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~-~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIF-SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHH-HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 4455667777888888888765554443 355665554433 11211 11222 2455667789998 999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHH-HHHHhcCccccccccccccCCCCCCC
Q 008231 104 AIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAAL-YTIALGGGGIKSNVSGFGSDQFDTSD 182 (573)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~~~~~~~~~~~~~~~~~~~~ 182 (573)
+-+++++++..+.++..-+... +...+++.- +.+-++.-+...+...+.+|.||.+.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~~~----------------------~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQLE----------------------NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCccccc----------------------ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH
Confidence 9999999988877776432110 111222211 22333444455566677899999998
Q ss_pred chHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhc-----ccchhHHHHHHHHHHHHHHHHHHhc
Q 008231 183 PKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQD-----NVGRGWGYGISAGTMVVAAAILLIG 241 (573)
Q Consensus 183 ~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~-----~~g~~~~f~~~~~~~~~~~~~~~~~ 241 (573)
|+...|+.....-+|+++|.....++.+ ..|.+++|++.+.+++++.+..++.
T Consensus 440 ------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 440 ------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred ------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 9999999999999999999999999998 7789999999988888777654443
No 250
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.82 E-value=0.047 Score=58.43 Aligned_cols=165 Identities=12% Similarity=0.045 Sum_probs=100.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----chhhhHHHHHHHHHHHHH-HhHHHHHhhhccchhHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLS-----SAKSATIVTNFMGTLNLL-GLLGGFLADAKLGRYLTVA 104 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-----~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Grr~~~~ 104 (573)
.++.++.+...-|+-.++|+.+.+ +.+.+..+ .....++-+...+...+. .++-+++++|+ +|++.+.
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~ 78 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFY 78 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHH
Confidence 345566666666676677766654 56666653 346667766665655555 78889999998 9999988
Q ss_pred HHHHHHHHHHHHHHhhccCCC--CC--CCCCccccccccccccch---------hhHHHHHHHHHHHHHhcCccccc-cc
Q 008231 105 IFASVTALVVGLLTSATSIPS--MR--PPQCDDYRRKHHQCIEAN---------GKQLAMLYAALYTIALGGGGIKS-NV 170 (573)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~g~g~~~~~~-~~ 170 (573)
+....+.....++++.- .|. .. ...||+ ........ ......+++ ...+-.....+ ..
T Consensus 79 ~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~----~~~~~~~~~~~~i~~~~~W~~~~FYv---~~elw~~~vvS~lF 150 (472)
T TIGR00769 79 TVISPFLGFFALFAFVI-YPLSDLLHPTALADK----LLSLLPPGFMGFIAILRIWSFALFYV---MAELWGSVVLSLLF 150 (472)
T ss_pred HHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHH----HHhhcchhhHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHH
Confidence 87777777666666541 110 00 000000 00000000 001111111 12222233333 66
Q ss_pred cccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhh
Q 008231 171 SGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQ 215 (573)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~ 215 (573)
+++..|.++.++ -.|.++++..+.|+|..+++.+..++.
T Consensus 151 W~fandi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 151 WGFANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999887 889999999999999999999988876
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.78 E-value=0.00056 Score=74.68 Aligned_cols=138 Identities=11% Similarity=0.211 Sum_probs=95.3
Q ss_pred ccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Q 008231 373 SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWL 452 (573)
Q Consensus 373 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l 452 (573)
..++.....+......|+.+++.|.++||.. ++.|.++..+|.++.+... +.-.+
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~-----------~i~g~~l~vvG~Iv~atA~--------------~~~~~ 134 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRLSDLFGRRYF-----------FIIGSLLGVVGSIVCATAQ--------------NMNTF 134 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHhcchHH-----------HHHHHHHHHhHHHHhhcCC--------------cHHHH
Confidence 4567777778888888999999999988864 6788888888888776542 44556
Q ss_pred HHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHH
Q 008231 453 VPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWL 532 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~ 532 (573)
+.+.++.|+|.+.... ....+.|..|.+.|+.+.++.....-+...+++.+...+... .+| .+.|++
T Consensus 135 iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~--~~W----------Rw~~~~ 201 (599)
T PF06609_consen 135 IAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH--SGW----------RWIFYI 201 (599)
T ss_pred HHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC--CCc----------chHHHH
Confidence 7788888888666553 345589999999999888877665555555666665554432 244 234555
Q ss_pred HHHHHHHHHHHHHHHH
Q 008231 533 LAVLGLLNFMVFLFFA 548 (573)
Q Consensus 533 ~a~~~~l~~~~~~~~~ 548 (573)
.++...++++...+++
T Consensus 202 ~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 202 FIIWSGIALVLIFFFY 217 (599)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5556555555544444
No 252
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.75 E-value=0.00049 Score=75.22 Aligned_cols=195 Identities=11% Similarity=-0.020 Sum_probs=106.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVT 110 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 110 (573)
.++.....+....+..++.+....+....+-+..|.+... .+...+..+...++..++.++.||+ |||+.++.+...+
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m 369 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGM 369 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHH
Confidence 4444444444445544443222222233334455666443 4445556667777788889999998 9999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 111 ALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
.++.++++......... ...... .....+....+.......+..|..+.+.+|.+|.+. |+
T Consensus 370 ~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~ 430 (513)
T KOG0254|consen 370 SICLVILAVVGVFALYY------------PNSSKG-AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RS 430 (513)
T ss_pred HHHHHHHHHHHHHhccC------------CCcccc-hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------Hh
Confidence 99988887653211000 000000 011122222222333344444666678899999998 88
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHHHHHHHHHHHH-HHHhcCcccc
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAA-ILLIGTPWYR 246 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~ 246 (573)
++.++......+...+-......+.+..++...|......+.+... ..++..||.+
T Consensus 431 ~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 431 KGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 8888855544444333322323333333334555555555545544 4555556543
No 253
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.75 E-value=8.6e-05 Score=74.88 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=91.5
Q ss_pred cccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Q 008231 372 PSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFW 451 (573)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 451 (573)
-.+.+.+...+...+..+..+.+.|+.+||.. +..|.+..++.+.+.+... ++..
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpv-----------ll~c~~~va~s~ll~~~S~--------------~F~a 123 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPV-----------LLACLIGVALSYLLWALSR--------------NFAA 123 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHH-----------HHHHHHHHHHHHHHHHHHH--------------HHHH
Confidence 45666777788888999999999998888853 6778888888777766642 4545
Q ss_pred HHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 452 LVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 452 lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~ 510 (573)
++..-++.|+..+..++ .-++++|+++++.|+.+++......++|-++||.+++++..
T Consensus 124 fv~aR~l~Gi~kgnl~v-~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 124 FVLARFLGGIFKGNLSV-IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHhhhhccCchHH-HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 56667788887766544 46899999999999999999999999999999999999875
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.60 E-value=0.0008 Score=71.22 Aligned_cols=161 Identities=12% Similarity=0.130 Sum_probs=99.5
Q ss_pred ccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Q 008231 373 SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWL 452 (573)
Q Consensus 373 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l 452 (573)
.+++.+...++.++..+.+++...+..+ ..+.++.|.+.+.++.+++...+.. .+...+++
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~----------~k~Pli~s~ii~~~g~llY~~l~~~---------~~~~~y~m 133 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGS----------VKKPLIVSFLIAIIGNLLYLALAYV---------PNGVKYLM 133 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCC----------cccCHHHHHHHHHHHHHHHHHHHhc---------ccchHHHH
Confidence 4556667788888888888877432211 1233889999999998888555431 12256778
Q ss_pred HHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--CccccccccchhhHHH
Q 008231 453 VPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNK--HWLRSNLNKGKLNNFY 530 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~--~w~~~~~~~~~~~~~~ 530 (573)
..+.++.|+|.+..... =+|+++..-.+.|-++++..+....+|.++||.+...+.-.... .|.++ ..-+.+...-
T Consensus 134 L~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~-~~~n~YTap~ 211 (488)
T KOG2325|consen 134 LVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPG-LIFNMYTAPA 211 (488)
T ss_pred HHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCc-ceEEecchHH
Confidence 88899999986554433 34666654445566666666655566666666655444332222 23331 2223344556
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchh
Q 008231 531 WLLAVLGLLNFMVFLFFAMKHQYN 554 (573)
Q Consensus 531 ~~~a~~~~l~~~~~~~~~~~~~~~ 554 (573)
|+.+++.++..++..++++|..+.
T Consensus 212 w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 212 WLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHHHHHHHHhheeecccC
Confidence 778888888888887777765443
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.44 E-value=0.0043 Score=55.85 Aligned_cols=108 Identities=10% Similarity=0.115 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHH
Q 008231 73 TIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAML 152 (573)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (573)
.-.++......+.+++...+.+++ |.|++++++.+.+.+-.+.... ++.+.+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~---------------------------~~~~~l 92 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY---------------------------PNSYTL 92 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh---------------------------hhHHHH
Confidence 335556667778888888899997 9999999999888765444332 356788
Q ss_pred HHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 008231 153 YAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 153 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l 214 (573)
+.+-++.|++.+..+.....++.+..++++ |++..+++....+.+.++|.++.-.+
T Consensus 93 ~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 93 YPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999887766 88888887777777777776555433
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.35 E-value=0.0011 Score=72.56 Aligned_cols=133 Identities=13% Similarity=0.199 Sum_probs=99.3
Q ss_pred ccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Q 008231 375 SLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVP 454 (573)
Q Consensus 375 ~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~ 454 (573)
..+++..++.+++..+.+.+.|+++||.. +..++++..++-+..++. .+++.+.+
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~-----------~~~~~~~~~i~~~~~a~a--------------~~~~~~~~ 176 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPV-----------LLVSLLLFIIFGILTAFA--------------PNYWMFLI 176 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHH-----------HHHHHHHHHHHHHHHHHh--------------CcHHHHHH
Confidence 34556667777777777778777676643 666777766666655554 36778888
Q ss_pred HHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHH
Q 008231 455 QYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLA 534 (573)
Q Consensus 455 ~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a 534 (573)
.-++.|++........+.++.|..+++.|+.+..+ ....+.++.+++...+++.. +| ...+++..
T Consensus 177 ~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~----~W----------r~~~~~~~ 241 (521)
T KOG0255|consen 177 FRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR----DW----------RWLFWIIS 241 (521)
T ss_pred HHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh----hH----------HHHHHHHH
Confidence 99999999999999999999999999999999999 88888889999999888874 34 24556656
Q ss_pred HHHHHHHHHHHHHH
Q 008231 535 VLGLLNFMVFLFFA 548 (573)
Q Consensus 535 ~~~~l~~~~~~~~~ 548 (573)
+...+..+. +++.
T Consensus 242 ~~~~~~~~~-~~l~ 254 (521)
T KOG0255|consen 242 IPSGLFLLL-WFLP 254 (521)
T ss_pred HHHHHHHHH-HHcc
Confidence 555555444 3443
No 257
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.19 E-value=0.0011 Score=70.63 Aligned_cols=153 Identities=15% Similarity=0.047 Sum_probs=117.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHH-HHhhhccchhHHHHHHH
Q 008231 30 GGWLAAGLILGTELSERICAMGISM-NLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGG-FLADAKLGRYLTVAIFA 107 (573)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G-~laDr~~Grr~~~~~~~ 107 (573)
+..|..+.+++..++...--.+-.. .++.|+...++++..+.+...+..+....++.++.. .+.-.+ |-|+++..|+
T Consensus 237 ~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl 315 (463)
T KOG2816|consen 237 GPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGL 315 (463)
T ss_pred CCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHH
Confidence 3444455555544443333222112 446788889999999999999999999999999988 555555 9999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 108 SVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
..-.+.....++++ +.++.+....+.+ ......|...++++.+.++++
T Consensus 316 ~~~~~~~~~~af~~--------------------------~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~e----- 363 (463)
T KOG2816|consen 316 LSEFLQLLLFAFAT--------------------------ETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPEE----- 363 (463)
T ss_pred HHHHHHHHHHHHhc--------------------------cchhhhHHHHHHH-hhcchhHHHHhHHHhhccccc-----
Confidence 99999999999985 4556676666544 445566888999999999999
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhhhhc
Q 008231 188 AMIFFFNRFYFAISIGSLFAVIVLVYVQD 216 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~~~~~l~~ 216 (573)
+|+++++......+.++++|.+-+.+..
T Consensus 364 -~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 364 -QGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred -ccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 9999999999999999999998877653
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.19 E-value=0.0027 Score=65.74 Aligned_cols=185 Identities=12% Similarity=-0.024 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.+.+++++..+....+|++...+-.-+ ..-|.+...+|.+.......+.++..+.|.++||..+-|.++++......++
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 445555555555555665555443233 3457777889999999999999999999999999845566666666665555
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
.......+..+ ...+.++..-.+.|.+.....|...-+..|..-|.. -+...
T Consensus 346 ~~~l~~~t~~~----------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSs 397 (480)
T KOG2563|consen 346 TLMLLTCTLFL----------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSS 397 (480)
T ss_pred HHHHHHhhccC----------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------Ccccc
Confidence 42222211111 122345555667788888888888888887654433 24455
Q ss_pred HHHHHHHHhhhHHHHHHhhhhhcccc----hhHHHHHHHHHHHHHHHHHHhcCccccc
Q 008231 194 NRFYFAISIGSLFAVIVLVYVQDNVG----RGWGYGISAGTMVVAAAILLIGTPWYRF 247 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~~~l~~~~g----~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 247 (573)
|+.+...++-+++=..+-+...+..+ +...-+.....+++..++..+.++.+++
T Consensus 398 Gll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 398 GLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred eeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 66555555555555556666666665 3333333334444455555566665544
No 259
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.98 E-value=0.0069 Score=48.15 Aligned_cols=68 Identities=13% Similarity=0.012 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhc
Q 008231 52 ISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSAT 121 (573)
Q Consensus 52 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 121 (573)
..+ +.+.++++.++|..+.+++.+...+++.++.+...++.++. .+++.+..+++...+.++.+++..
T Consensus 11 yTp-lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 11 YTP-LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHh-HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344 44577889999999999999999999999999999999986 888999999999999999998864
No 260
>PRK03612 spermidine synthase; Provisional
Probab=96.72 E-value=0.06 Score=58.67 Aligned_cols=173 Identities=13% Similarity=0.023 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHH-HHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVA-IFASVTA 111 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~ 111 (573)
+.+..+.+..-+..+.+. ....-.+...+|-+..+.+.+++++.++..++..++|+++++. -|+...+ ++..+.+
T Consensus 17 ~~l~~~~f~sg~~~L~yE---v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~ 92 (521)
T PRK03612 17 ALLLAAVFVCAACGLVYE---LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHH
Confidence 334444444444444444 3344455667788999999999999999999999999887553 3332211 1111111
Q ss_pred -HHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHH
Q 008231 112 -LVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMI 190 (573)
Q Consensus 112 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 190 (573)
+...+...+... .......++...++.++..|+..|....+..+... ++ -+
T Consensus 93 ~~~~~ll~~~~~~---------------------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g 144 (521)
T PRK03612 93 GLSALILYAAFAF---------------------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LG 144 (521)
T ss_pred HHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hh
Confidence 111111111000 00111122333445677777777776666554322 12 45
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhc-ccchh-HHHHHHHHHHHHHHHH
Q 008231 191 FFFNRFYFAISIGSLFAVIVLVYVQD-NVGRG-WGYGISAGTMVVAAAI 237 (573)
Q Consensus 191 ~~~~~~~~~~~ig~~~~~~~~~~l~~-~~g~~-~~f~~~~~~~~~~~~~ 237 (573)
+..|..+....+|+++|.++.+++.- ..|-. ..+.+..+..+++++.
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 56777788888999999888887654 56744 4444443333344333
No 261
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.70 E-value=0.016 Score=56.57 Aligned_cols=118 Identities=14% Similarity=0.197 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHH
Q 008231 411 SLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLF 490 (573)
Q Consensus 411 ~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~ 490 (573)
+...+.+|.++..+++..+...... .....+.|.+.....+.+.+....+........+.+|+ .||++.|+.
T Consensus 65 p~~~l~iG~~~~~~GY~~~~l~~~~-------~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgil 136 (250)
T PF06813_consen 65 PWVVLLIGAVLGFVGYGLLWLAVSG-------RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGIL 136 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhC-------ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhh
Confidence 3344778888888888776554321 11224566666666666677666666666667788985 699999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 008231 491 LSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAM 549 (573)
Q Consensus 491 ~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 549 (573)
.....+++.+-..+...+.+. +...+...++....+..++...+.+
T Consensus 137 k~~~GLSaai~t~i~~~~f~~-------------~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 137 KGFFGLSAAIFTQIYSAFFGD-------------DPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred hHHHHhHHHHHHHHHHHHcCC-------------ChHHHHHHHHHHHHHHHHHHhhhee
Confidence 999999888877776666531 2234455555555544444434443
No 262
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.42 E-value=0.022 Score=63.23 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHH-HHHHHhHHHHHhhhc-cchhHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGT-LNLLGLLGGFLADAK-LGRYLTVAIFASVTA 111 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~G~laDr~-~Grr~~~~~~~~~~~ 111 (573)
.....+++..++...+-+..+++|-|+++++|.+...+..+.+...+. ..++.+++|++.-|+ ...|.+..+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 455667788888899999999999999999999999999999777654 668899999999886 344555554444444
Q ss_pred HHHHH---HHhh--c------------cCC--------------------CCCCCCCcccccc-----cc----------
Q 008231 112 LVVGL---LTSA--T------------SIP--------------------SMRPPQCDDYRRK-----HH---------- 139 (573)
Q Consensus 112 ~~~~~---~~~~--~------------~~~--------------------~~~~~~~~~~~~~-----~~---------- 139 (573)
+..+. ..+. . +.+ +.-.|.|++.+-+ ||
T Consensus 473 l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~ 552 (735)
T KOG3626|consen 473 LSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSD 552 (735)
T ss_pred HHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCC
Confidence 33333 1110 0 000 1223445443211 11
Q ss_pred --------cccc----------------chhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 140 --------QCIE----------------ANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 140 --------~~~~----------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
+|.+ +-...+..+++..++.-+..+...+....++-+.+|+++ |..++|+
T Consensus 553 ~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG~ 626 (735)
T KOG3626|consen 553 GNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALGF 626 (735)
T ss_pred CceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhHH
Confidence 2222 112233444444444444444444556677778889888 9999999
Q ss_pred HHHH-HHhhhHHHHHHhhhhhcc
Q 008231 196 FYFA-ISIGSLFAVIVLVYVQDN 217 (573)
Q Consensus 196 ~~~~-~~ig~~~~~~~~~~l~~~ 217 (573)
..+. .-+|.+-+|++.|+++|.
T Consensus 627 ~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 627 QWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHHhcCCchHhhhhhHhh
Confidence 6654 478889999999999874
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.14 E-value=0.0014 Score=71.65 Aligned_cols=179 Identities=15% Similarity=0.118 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHH-HHHHHHhHHHHHhhhc-cchhHHHHHHHHHH
Q 008231 33 LAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMG-TLNLLGLLGGFLADAK-LGRYLTVAIFASVT 110 (573)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~-~Grr~~~~~~~~~~ 110 (573)
+......++...+.....++..++|-|++.++++++++++.+.+...+ +..++.+++|++..|+ .+.|+.+....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 345566777778888888999999999999999999999999988766 5668899999999986 34455555444443
Q ss_pred HHHHHH---HHhh--cc-------CCC----------CCCCCCccc------cccccccccchhhHHHHHHHHHHHHHhc
Q 008231 111 ALVVGL---LTSA--TS-------IPS----------MRPPQCDDY------RRKHHQCIEANGKQLAMLYAALYTIALG 162 (573)
Q Consensus 111 ~~~~~~---~~~~--~~-------~~~----------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~g~g 162 (573)
.++.++ ..+. .+ .+. ...+.|+.. .-++-.|...-...+..+++..++..+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 333332 1110 00 000 000111110 0011133333122444555555555555
Q ss_pred CccccccccccccCCCCCCCchHHHhHHHHHHHHHH-HHHhhhHHHHHHhhhhhcc
Q 008231 163 GGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYF-AISIGSLFAVIVLVYVQDN 217 (573)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ig~~~~~~~~~~l~~~ 217 (573)
.+..........-+..|+++ |+.+.|+... ..-+|.+=||++.|.+.|.
T Consensus 465 ~~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 465 TFMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------------------
T ss_pred HHhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 55555555566668889888 9999999655 4477889999999999874
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.01 E-value=0.17 Score=53.53 Aligned_cols=154 Identities=10% Similarity=-0.101 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALV 113 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 113 (573)
.++...++-.+-+++.-+.-..+..|+..+ |+|+...|..-+.-.+.+..+.....++.+|+ |..|+=+++...-..+
T Consensus 259 ~vflas~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~ 336 (432)
T PF06963_consen 259 PVFLASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVC 336 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHH
Confidence 344444444444444444556678898866 99999999999999999999999999999998 9999888887766665
Q ss_pred HHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHH
Q 008231 114 VGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFF 193 (573)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 193 (573)
..++..+-..+. +.....+...++.+..+.-+|.-++.-+..-++.|..|+++ |+...
T Consensus 337 L~~~v~~~~~~~----------------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~ 394 (432)
T PF06963_consen 337 LALCVVSFWAPG----------------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVS 394 (432)
T ss_pred HHHHHHHHhcCC----------------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHH
Confidence 555544322121 00012456677778888888889999999999999999888 99999
Q ss_pred HHHHHHHHhhhHHHHHHh
Q 008231 194 NRFYFAISIGSLFAVIVL 211 (573)
Q Consensus 194 ~~~~~~~~ig~~~~~~~~ 211 (573)
|..+...++--.+-..++
T Consensus 395 gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 395 GVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888888887765544
No 265
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.77 E-value=0.073 Score=56.27 Aligned_cols=181 Identities=12% Similarity=-0.025 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC----chhhhHHHHHHHHHHHHHHhHHHHHhhhccchh-------HH
Q 008231 34 AAGLILGTELSERICAMGISMNLVTYLVGDLHLS----SAKSATIVTNFMGTLNLLGLLGGFLADAKLGRY-------LT 102 (573)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s----~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-------~~ 102 (573)
....+++...+.+..+.-..+.+..|..+..+.+ +-..++..+...+...+..|+..++--+. +++ .-
T Consensus 285 ~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~K 363 (498)
T COG3104 285 AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIK 363 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchH
Confidence 3344444444444444445556666666433222 12345666666666666766666666553 332 22
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCC
Q 008231 103 VAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSD 182 (573)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~ 182 (573)
+.+++.+...+.+++..... ..+++....+++.++..-+++++|.=+..|...+++....|+.-
T Consensus 364 FalGl~l~g~~fl~l~~~~~----------------~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~ 427 (498)
T COG3104 364 FALGLILAGLGFLILLLAGI----------------WFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL 427 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHH----------------hhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH
Confidence 44566666666655554310 01222223467788889999999999999999999999999887
Q ss_pred chHHHhHHHHHHHHHHHHHhhhHHHHHHhhhh------hcccchhHHHHHHHHHHHHHHHH
Q 008231 183 PKEEKAMIFFFNRFYFAISIGSLFAVIVLVYV------QDNVGRGWGYGISAGTMVVAAAI 237 (573)
Q Consensus 183 ~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l------~~~~g~~~~f~~~~~~~~~~~~~ 237 (573)
.+..++.+......|..++..+.+.- .+.......|+..+...++..+.
T Consensus 428 ------~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 428 ------KSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGIL 482 (498)
T ss_pred ------HHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 89999998888888888776666531 12223445566555544433333
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.74 E-value=0.06 Score=60.24 Aligned_cols=93 Identities=27% Similarity=0.486 Sum_probs=74.1
Q ss_pred CCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccc
Q 008231 443 KHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLN 522 (573)
Q Consensus 443 ~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~ 522 (573)
.....+.+|.++.+++.++++.+.....+.+..+.+|++++....+++.+...+|+.+...+...-...
T Consensus 559 ~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~----------- 627 (654)
T TIGR00926 559 SVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFS----------- 627 (654)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCh-----------
Confidence 345578899999999999999999999999999999999999999999999999999988876543221
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHH
Q 008231 523 KGKLNNFYWLLAVLGLLNFMVFLFFA 548 (573)
Q Consensus 523 ~~~~~~~~~~~a~~~~l~~~~~~~~~ 548 (573)
+...-|..++.+.++..+++..+.
T Consensus 628 --~~~~~~~~~~~~~~~~~~~f~~~a 651 (654)
T TIGR00926 628 --VQAAEFFLFASLMLVVMAIFSILA 651 (654)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122456666766666666665554
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.97 E-value=0.27 Score=52.40 Aligned_cols=113 Identities=23% Similarity=0.287 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeeccc---CchhHHHHHHHHH
Q 008231 415 VGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREG---PERMKSMSTGLFL 491 (573)
Q Consensus 415 ~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~---p~~~rg~~~gi~~ 491 (573)
+.++.++..++.+.++... ....+.......+++..+|..+.....-+...|.. |.+ +|..++...
T Consensus 62 ~~i~~~~~~~~~~~~~~~~----------~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~ 130 (433)
T PF03092_consen 62 MIIGWLLGAVSALVLALLP----------ASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVW 130 (433)
T ss_pred HHHHHHHHHHHHHHHHhcc----------cccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHH
Confidence 6666666655555555442 21223444555667778888888888777777776 444 889999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 492 SAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMK 550 (573)
Q Consensus 492 ~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 550 (573)
....+|+.++..+.|...+..+ ....|.+.+.+..+..+..+++.++
T Consensus 131 ~~~~~G~lv~~~l~G~l~~~~~------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 131 GVRSVGSLVGSLLSGPLLDSFG------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHhhhhhhhcCC------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999988765432 1234555666666665555555554
No 268
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.81 E-value=0.15 Score=53.12 Aligned_cols=116 Identities=16% Similarity=0.083 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCch---hHHHHHHHHH
Q 008231 415 VGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPER---MKSMSTGLFL 491 (573)
Q Consensus 415 ~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~---~rg~~~gi~~ 491 (573)
+..|.++..+|++++.+...... ..+..+...+.+++.+.++|.++.=|...++..|+++++ .|.+....+.
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~-----~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY 78 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPS-----LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFY 78 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSS-----C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcch-----hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHH
Confidence 67788888889888666531000 011223456777888899999999999999999998754 5677777888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 008231 492 SAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFF 547 (573)
Q Consensus 492 ~~~~lg~~ig~~~~~~i~~~~~~~w~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 547 (573)
...++|..++..+.+++.+.. +....|++.++..+++.+.++.-
T Consensus 79 ~~in~G~~~~~~~~~~i~~~~------------~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 79 WGINIGSLFSPTLVPYIQQNY------------GWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHHCCCHHHHCS-------------HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhhhhHhhcccchhhcccc------------chhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999987532 23456777777777666655443
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.62 E-value=6.7 Score=40.91 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=43.0
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008231 448 SAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSML 504 (573)
Q Consensus 448 ~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~ 504 (573)
+-+|.+....+.|+..+-.....+.+..+.+|++.+..+..++.++...|-..|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 345667777888998888888899999999999888888777666665555555444
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.57 E-value=0.16 Score=52.92 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhh
Q 008231 148 QLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYV 214 (573)
Q Consensus 148 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l 214 (573)
+.+.+++..+..|+..|..+.+....+.|..|+++ |..+++....+-++|..++.+++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67777788888999999999999999999888877 99999999999999998887776554
No 271
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.47 E-value=0.55 Score=47.06 Aligned_cols=116 Identities=16% Similarity=0.069 Sum_probs=72.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFAS 108 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 108 (573)
+..-|.++.+....++....|-+... +...+..++| ..+ .+.........+++.+.+..++ |-|+++.++..
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~gl~n-lq~~vn~~lg----~~s--l~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLGLQN-LQTSVNYDLG----TVS--LGALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHH-HHHHHhcCcc----cch--hhhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 34445677777766666666655543 3333333332 222 1223444455556666777776 99999998877
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCC
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFD 179 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~ 179 (573)
.+.... ++++. +.+..++.+-...|.|.+..+..-.++++++-.
T Consensus 97 ~Y~lyi-----A~Nl~----------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 97 PYALYI-----AANLE----------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHH-----Hhhcc----------------------hhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 665532 22222 466677788888999999999988888887643
No 272
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.81 E-value=1.1 Score=47.72 Aligned_cols=158 Identities=15% Similarity=-0.009 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCCchhhhHHHHHH-HHHHHHHHhHHHHHhhh---ccchhHHHHHHHH
Q 008231 35 AGLILGTELSERICAMGISMNLVTYLVG--DLHLSSAKSATIVTNF-MGTLNLLGLLGGFLADA---KLGRYLTVAIFAS 108 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~~~~s~~~~~~~~~~~-~~~~~~~~~~~G~laDr---~~Grr~~~~~~~~ 108 (573)
+..+....+..++......+..|..+.- .++.+....-.+.+.. ..+..++.++.+.+++| + ||++++.++..
T Consensus 242 ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~ 320 (461)
T KOG3098|consen 242 MLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGF-GRKPTVLIGII 320 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhc-ccCcchhHHHH
Confidence 3334443344333333334444444442 3444443332222222 23333445555666544 5 89999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCcccc-ccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHH
Q 008231 109 VTALVVGLLTSATSIPSMRPPQCDDYR-RKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEK 187 (573)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
+..++.++.-+.. | .|.. |.+.+-....+++....++.-++.|++.+........++++.+| ++
T Consensus 321 ~~~~~~~li~l~~--p-------~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~----- 385 (461)
T KOG3098|consen 321 IHLIGFLLIHLSF--P-------NDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DD----- 385 (461)
T ss_pred HHHHHHHHHhccc--c-------ccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-Cc-----
Confidence 8888877776643 2 1221 11123333444566666777788999999999999999999994 44
Q ss_pred hHHHHHHHHHHHHHhhhHHHHH
Q 008231 188 AMIFFFNRFYFAISIGSLFAVI 209 (573)
Q Consensus 188 ~r~~~~~~~~~~~~ig~~~~~~ 209 (573)
|..+++++..-..++..++-.
T Consensus 386 -~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 386 -RAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred -hHHHHHHHHHHHHHHHHHHhh
Confidence 788888776666666655433
No 273
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.43 E-value=1.2 Score=40.13 Aligned_cols=62 Identities=18% Similarity=0.365 Sum_probs=52.6
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008231 448 SAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVD 509 (573)
Q Consensus 448 ~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~ 509 (573)
..+.+++..++.|++.+..+...-.++.+...++.+++..+++-.....+.++|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999988888888888877755443
No 274
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.37 E-value=13 Score=39.81 Aligned_cols=63 Identities=13% Similarity=0.112 Sum_probs=51.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008231 449 AFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 449 ~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~ 511 (573)
+..++...++..+.....+....++-.+++.|..-|+++.+.|...++|+--...++-+..|.
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 344556678888888888899999999999999999999999999999998777666655543
No 275
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=92.85 E-value=0.96 Score=45.78 Aligned_cols=153 Identities=12% Similarity=0.015 Sum_probs=80.3
Q ss_pred HHHHHHHh-hhcCCCchhhh-HHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 008231 54 MNLVTYLV-GDLHLSSAKSA-TIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQC 131 (573)
Q Consensus 54 ~~l~~yl~-~~~~~s~~~~~-~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (573)
+++.+|+. .+.+++..|.. -+.-...-.+.+.-++.=.+.|.. --|++++.-.+...+.-.++-+..+
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~l-rYKPvivlq~ls~v~~w~~lv~g~s--------- 94 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYL-RYKPVVVLQALSGVPVWIMLVFGPS--------- 94 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhh-hcceeeeeeccchhHHHHHHHhcCC---------
Confidence 45666766 56677776654 222233334444444444688976 4566665554444444455555432
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHh
Q 008231 132 DDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVL 211 (573)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~ 211 (573)
.+.+=+.-+..|...+.. .+-++++-+..++++ +-++.+....+.-.|-..|..++
T Consensus 95 -----------------V~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~------Yqrvt~y~RaA~L~g~~~g~vla 150 (433)
T KOG3810|consen 95 -----------------VKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEM------YKRVTGYCRAAFLVGKFVGSVLA 150 (433)
T ss_pred -----------------chheeeehhhcChHHHHH-HhhhheeeeecCHHH------HHHHHHHhHHHHHHHhHHHhHHH
Confidence 222223333444433332 234455555556555 77777777777777777666665
Q ss_pred hhhhc--ccchhHHHHHHHHHHHHHHHHHHh
Q 008231 212 VYVQD--NVGRGWGYGISAGTMVVAAAILLI 240 (573)
Q Consensus 212 ~~l~~--~~g~~~~f~~~~~~~~~~~~~~~~ 240 (573)
-.+.. ..++...=.++.....++.++.++
T Consensus 151 QlLvs~~~~sy~~LN~ISL~~~~ia~~~A~f 181 (433)
T KOG3810|consen 151 QLLVSLETLSYTTLNYISLAEVTIAVLLALF 181 (433)
T ss_pred HHHhhhcccchhhhchhhHHHHHHHHHHHhh
Confidence 55543 233443334555555555544433
No 276
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.84 E-value=15 Score=39.12 Aligned_cols=57 Identities=11% Similarity=0.207 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 449 AFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLV 505 (573)
Q Consensus 449 ~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~ 505 (573)
-++.++..++.|+..+......+.+..+.++++.|..+..++.++..+|-.+|+.+.
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566688999999999999999999999999999999988888888887777663
No 277
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.44 E-value=16 Score=39.62 Aligned_cols=166 Identities=13% Similarity=-0.006 Sum_probs=90.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---CchhhhHHHHHHHH-HHHHHHhHHHHHhhhccchhHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHL---SSAKSATIVTNFMG-TLNLLGLLGGFLADAKLGRYLTVAIF 106 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~---s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~ 106 (573)
.++.++.+.+.-++-.+.|..+.. +++.+=. ++....++-....+ ...+...+-.+++|++ +|.+++.+.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR~-----~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~ 95 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILRD-----LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYII 95 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHH
Confidence 445666666666666555533322 2332211 33444444443333 3445567779999998 999998877
Q ss_pred HHHHHHHHHHHHhhccCCC--CC--CCCCccccccccccccchhhHHHHH---------HHHHHHHHhcCccccc-cccc
Q 008231 107 ASVTALVVGLLTSATSIPS--MR--PPQCDDYRRKHHQCIEANGKQLAML---------YAALYTIALGGGGIKS-NVSG 172 (573)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~g~g~~~~~~-~~~~ 172 (573)
...+.....+.++.- +|. .. ...|++ .+ ...+..+..+ .+.-...-+-.....+ .-++
T Consensus 96 ~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~----~~---~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~ 167 (491)
T PF03219_consen 96 IIPFLGFFALFAFVL-YPNRDILHPDAFADK----LL---AILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWG 167 (491)
T ss_pred HHHHHHHHHHHHHHH-hhchhhcCCCHHHHH----hh---hhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666666665532 120 00 000100 00 0000111110 0000111111112222 3467
Q ss_pred cccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhc
Q 008231 173 FGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQD 216 (573)
Q Consensus 173 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~ 216 (573)
+..|.++.++ -.+.++.+..+.|+|.+++..+..++.+
T Consensus 168 fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 168 FANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889888887 8899999999999999999888888876
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.20 E-value=15 Score=39.45 Aligned_cols=58 Identities=12% Similarity=0.001 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhhhh-hhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 453 VPQYFLVGAGEAFVYV-GQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~-~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~ 510 (573)
.++++...+-...+.. ..|+++.|....+...+-.++.....++|..+++.+..++.+
T Consensus 132 ~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 132 ALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555544444444 889999999999999999999999999999999999888764
No 279
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=92.14 E-value=14 Score=37.88 Aligned_cols=111 Identities=12% Similarity=0.046 Sum_probs=62.7
Q ss_pred ccccchhhHHHHHHHHHhhhhhhhhhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Q 008231 373 SGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWL 452 (573)
Q Consensus 373 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~l 452 (573)
.+.+........++++++.+.+.|+.+||+. -+...++.+++.+ .. +....+.+
T Consensus 71 Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-----------cl~~cily~~scl----~k-----------~~~~~~~L 124 (354)
T PF05631_consen 71 IAILFVAGFASSAIFGTFVGSLADRYGRKKA-----------CLLFCILYSLSCL----TK-----------HSSNYPVL 124 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHH-----------HHHHHHHHHHHHH----HH-----------hccccHHH
Confidence 4556667778888889999999888887742 1222222222222 11 12356777
Q ss_pred HHHHHHHHHHHHhhhhhhhhee-e----cccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHh
Q 008231 453 VPQYFLVGAGEAFVYVGQLEFF-I----REGPERMKSMSTGLFL-SAISMGMFVSSMLVSIVD 509 (573)
Q Consensus 453 v~~~~l~g~~~~~~~~~~~~~~-~----~~~p~~~rg~~~gi~~-~~~~lg~~ig~~~~~~i~ 509 (573)
++.-++.|++..+.....-++. . +-.|++..+...+... ..+.+-.++++.+.....
T Consensus 125 ~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~ 187 (354)
T PF05631_consen 125 LLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLA 187 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 8888888888877766544432 2 3356665555555444 223333344444444433
No 280
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=90.19 E-value=0.46 Score=49.77 Aligned_cols=181 Identities=12% Similarity=-0.100 Sum_probs=91.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-CCCc---------------hhhhHHHHHHHHHHHHHHhHHHH
Q 008231 29 TGGWLAAGLILGTELSERICAMGISMNLVTYLVGD-L-HLSS---------------AKSATIVTNFMGTLNLLGLLGGF 91 (573)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~-~~s~---------------~~~~~~~~~~~~~~~~~~~~~G~ 91 (573)
...+|..+.++...++.+++.+...-+-+.++-+. + |-+. ..-.|=..++.+...+.+..--+
T Consensus 275 ~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~ 354 (498)
T KOG0637|consen 275 KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEK 354 (498)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence 44667889999999999999877776666666542 1 1111 11123456677888888999999
Q ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCcccccccc
Q 008231 92 LADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVS 171 (573)
Q Consensus 92 laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~ 171 (573)
+.||+ |-|+.++.+...+.++..+..+..+..... ..++..-....+.....+.+...-...++-.+.......
T Consensus 355 l~~~~-g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~-----~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf 428 (498)
T KOG0637|consen 355 LSRKF-GTRKRYWGGVNAFGLATGLAGLVLNTYVVL-----SHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPF 428 (498)
T ss_pred HHHhc-CcceEEeehhHHHHHHHHHHhhhhhHHHHH-----HHHhhcceeecchhcccHHHHHHHHHhCCcccccccccc
Confidence 99998 856555555443444444443321000000 000000000000001111122212223333333333333
Q ss_pred ccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccc
Q 008231 172 GFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVG 219 (573)
Q Consensus 172 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g 219 (573)
+..+....... ++ +|.-.++.+..+.+..++.....|.+.+..|
T Consensus 429 ~~~s~~~~~sg---~g-~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 429 ALASIEIGNSG---LG-QGLDLGVLNCAIVIPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred ccccccccCcc---CC-CCceeeeeeeeeeehhheeeccccchhhhcC
Confidence 33332222222 11 3566667787888888877777777766665
No 281
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=89.44 E-value=4.9 Score=39.18 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhh---hc--ccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 008231 189 MIFFFNRFYFAISIGSLFAVIVLVYV---QD--NVGRGWGYGISAGTMVVAAAILLIGTPW 244 (573)
Q Consensus 189 r~~~~~~~~~~~~ig~~~~~~~~~~l---~~--~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 244 (573)
|+....+..++.++|+++.-+..-.- .+ .-.|++++.+.+++.++-++.+.+..++
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66777777788899998874432211 11 2259998888877777666666555444
No 282
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.12 E-value=3.2 Score=40.56 Aligned_cols=140 Identities=16% Similarity=0.047 Sum_probs=85.5
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHhhhccchh--HHHHHHHHHHHHHHHHHHhhcc-CCCCCCCCCccccccccccccchh
Q 008231 70 KSATIVTNFMGTLNLLGLLGGFLADAKLGRY--LTVAIFASVTALVVGLLTSATS-IPSMRPPQCDDYRRKHHQCIEANG 146 (573)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 146 (573)
--|.+.+.|+++..+++-+..++..|- ..| ..+.+..++......+..+..+ .|+ .
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~--------------------k 341 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVSPS--------------------K 341 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccCCC--------------------c
Confidence 458899999999888888887877664 222 3344444443333322222111 111 1
Q ss_pred hHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhcccchhHHHHH
Q 008231 147 KQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGI 226 (573)
Q Consensus 147 ~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~ 226 (573)
.+...-+++-.+.-.+.|.++|....+=+++.|+++ |...++++..-.|+-.-++-..--.=....+-|..|.+
T Consensus 342 es~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~i 415 (454)
T KOG4332|consen 342 ESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGI 415 (454)
T ss_pred CCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhh
Confidence 122333555556677889999999999999999988 99999998887777554432110000112345677877
Q ss_pred HHHHHHHHHH
Q 008231 227 SAGTMVVAAA 236 (573)
Q Consensus 227 ~~~~~~~~~~ 236 (573)
+.+...++.+
T Consensus 416 cS~~~~~a~i 425 (454)
T KOG4332|consen 416 CSAFLFVASI 425 (454)
T ss_pred hHHHHHHHHH
Confidence 7776665544
No 283
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.03 E-value=3.6 Score=41.08 Aligned_cols=57 Identities=14% Similarity=0.261 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 449 AFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLV 505 (573)
Q Consensus 449 ~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~ 505 (573)
.+.+....++-|+-.+..+...+--+.+..+++.|-.+++...+.-++|-.+++.+.
T Consensus 342 i~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 342 IWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 333333334445544455566666677778888999999988887777777766664
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.01 E-value=4.2 Score=43.40 Aligned_cols=57 Identities=11% Similarity=0.082 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 008231 148 QLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIV 210 (573)
Q Consensus 148 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~ 210 (573)
+-+..++..++.|+..|-..+....+..+..++++ |..+-.+...+.++|-..|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 33455666788999999988888888888877655 7777777777777777777554
No 285
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=82.16 E-value=11 Score=36.36 Aligned_cols=63 Identities=17% Similarity=0.193 Sum_probs=48.0
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhheeecccCc-hhHHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Q 008231 448 SAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPE-RMKSMSTGLFLS-AISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 448 ~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~-~~rg~~~gi~~~-~~~lg~~ig~~~~~~i~~ 510 (573)
..+.++......|++.+...+....++.+..|+ +.|+...+.... ...+|..+++.+.+.+..
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555557888888889999999999998 678888888887 577788888866666654
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=79.19 E-value=89 Score=32.93 Aligned_cols=81 Identities=16% Similarity=0.118 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHH
Q 008231 415 VGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAI 494 (573)
Q Consensus 415 ~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~ 494 (573)
++.+.+...+..+++.+.. +.+++-+.-++.|++.+. -..-++|+...+|++.--++++....+.
T Consensus 74 iil~~~~~i~t~~lll~~~--------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~ 138 (412)
T PF01770_consen 74 IILQALSYIITWLLLLFGT--------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAAT 138 (412)
T ss_pred HHHHHHHHHHHHHHHHHHC--------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHH
Confidence 5555555555555554432 555666666777777554 4667789999999988888888888888
Q ss_pred HHHHHHHHHHHHHHhh
Q 008231 495 SMGMFVSSMLVSIVDK 510 (573)
Q Consensus 495 ~lg~~ig~~~~~~i~~ 510 (573)
-+|..+++.++..+..
T Consensus 139 l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 139 LVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888887776553
No 287
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=78.36 E-value=1e+02 Score=33.15 Aligned_cols=170 Identities=12% Similarity=0.015 Sum_probs=96.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC---chhhhHHHHHHHH-HHHHHHhHHHHHhhhccchhHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLS---SAKSATIVTNFMG-TLNLLGLLGGFLADAKLGRYLTVAIF 106 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s---~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~ 106 (573)
.++.+..+.+..++-.+.++.+.+ +.+.+..+ +....++-....+ +..+..++-+++.+++ .|.+++.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 445555566655666555544433 45555444 4455566666655 5667788889999998 999999988
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCc-cccc-----cc-c---ccccchhhHHHHHHHHHHHHHhcCccccc-ccccccc
Q 008231 107 ASVTALVVGLLTSATSIPSMRPPQCD-DYRR-----KH-H---QCIEANGKQLAMLYAALYTIALGGGGIKS-NVSGFGS 175 (573)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~-~---~~~~~~~~~~~~~~~~~~l~g~g~~~~~~-~~~~~~~ 175 (573)
...+....+++++.- +|.-..-+-| +.+| .+ + .-......+...+++.- -+-.....+ ....+..
T Consensus 99 ~~~F~~fF~LFa~Vi-~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~a---ELWgslV~S~lFw~faN 174 (509)
T COG3202 99 LGFFLGFFALFAFVI-YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMA---ELWGSLVLSLLFWQFAN 174 (509)
T ss_pred HHHHHHHHHHHHHHH-hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 888888888888753 2210000001 1111 00 0 00000001111222111 110111111 2345567
Q ss_pred CCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhc
Q 008231 176 DQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQD 216 (573)
Q Consensus 176 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~ 216 (573)
|.++.++ -.|.++.++.+.|++..++..+..++..
T Consensus 175 eitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 175 EITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777777 8899999999999999999888888765
No 288
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=76.72 E-value=18 Score=37.56 Aligned_cols=112 Identities=12% Similarity=0.116 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHhhhhhhh-hhhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHH
Q 008231 379 FLFITILLFTSLNEKVFV-PLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYF 457 (573)
Q Consensus 379 ~~~~~~l~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~g~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~ 457 (573)
.+...-++..|++|.+.. +++||+.. -.+.....|..+..++..+-..... .+...+.......++
T Consensus 75 ~P~sLKllWaPiVDs~y~k~~GrrksW-----vvp~q~llG~~mllLs~~v~~~~g~--------ng~~p~v~~lt~~f~ 141 (510)
T KOG3574|consen 75 WPFSLKLLWAPIVDSVYSKRFGRRKSW-----VVPCQYLLGLFMLLLSYLVDRGLGG--------NGGLPNVVALTLLFL 141 (510)
T ss_pred hHHHHHHHHHhhhHHHHHHhhccccce-----eeehHHHHHHHHHHHhhCCCccccc--------CCCCcchHHHHHHHH
Confidence 344556788899886643 33443322 2222345555554444332221110 111122222222333
Q ss_pred HHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHH
Q 008231 458 LVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSM 503 (573)
Q Consensus 458 l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~ 503 (573)
+..+..+.-....-.....+..++..|-+..........|.+++..
T Consensus 142 LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 142 LLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 3333333333333344445555666666655555455555544443
No 289
>PRK03612 spermidine synthase; Provisional
Probab=75.53 E-value=46 Score=36.45 Aligned_cols=52 Identities=13% Similarity=0.117 Sum_probs=32.8
Q ss_pred HHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 458 LVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 458 l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~ 510 (573)
+.++-.+...|....+..+.. .+.-|...|-....+.+|+++|+++.+.+.-
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 344555555555444333321 2224566777788899999999999988763
No 290
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=70.46 E-value=59 Score=35.07 Aligned_cols=33 Identities=9% Similarity=-0.010 Sum_probs=20.2
Q ss_pred eecccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 474 FIREGPERMKSMSTGLFLSAISMGMFVSSMLVS 506 (573)
Q Consensus 474 ~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~ 506 (573)
+..+..++.++.+......-+++|.+++-.+.-
T Consensus 143 ALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFl 175 (544)
T PF13000_consen 143 ALTMLSPENVGYASTCQTVGQTAGYFLSFTVFL 175 (544)
T ss_pred hhhhcChhhcchHHHHHHhHhhhhHHHHHHHHH
Confidence 334456677777777666666666666554443
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.37 E-value=45 Score=27.65 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=27.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008231 479 PERMKSMSTGLFLSAISMGMFVSSMLVSIVDKI 511 (573)
Q Consensus 479 p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~~ 511 (573)
.++.++.++++-...-.+++++.+...||+.+.
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888888888899999999999988764
No 292
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=66.34 E-value=62 Score=31.66 Aligned_cols=28 Identities=11% Similarity=0.017 Sum_probs=15.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008231 481 RMKSMSTGLFLSAISMGMFVSSMLVSIV 508 (573)
Q Consensus 481 ~~rg~~~gi~~~~~~lg~~ig~~~~~~i 508 (573)
-.|..+.|+.....+..+.+.+...+..
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~grf 102 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWASGRF 102 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 3455555555555555555555665544
No 293
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=66.20 E-value=16 Score=38.10 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHH
Q 008231 148 QLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFA 207 (573)
Q Consensus 148 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 207 (573)
+-+.++....+.|+..|-..+....+..+..|+++ +..+-.+.......|-..|
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHh
Confidence 34566667778899999988888888888877766 5555555544455555444
No 294
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=64.84 E-value=1.8 Score=43.88 Aligned_cols=57 Identities=9% Similarity=0.131 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 008231 148 QLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIV 210 (573)
Q Consensus 148 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~ 210 (573)
+-+..++..++.|+..|-..+....+..+..++++ |..+-.+.....++|-.+|..+
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --------------------HHHH---------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 33455666788999999999988889999888777 7777777777777777766544
No 295
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=64.82 E-value=9.2 Score=37.26 Aligned_cols=66 Identities=18% Similarity=0.084 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHH---------hhhccchhHHH
Q 008231 36 GLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFL---------ADAKLGRYLTV 103 (573)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr~~Grr~~~ 103 (573)
+.--.+.+.+..+....++++..|++ +.|.++...+.++.+-+..-++..++.|.. .||+ |||+..
T Consensus 20 f~yGvGHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 20 FAYGVGHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred eeechhHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 44566788899999899999999988 568888888888888888899998888733 6787 888754
No 296
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.22 E-value=30 Score=28.67 Aligned_cols=39 Identities=18% Similarity=-0.009 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 008231 76 TNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVV 114 (573)
Q Consensus 76 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 114 (573)
+.=.+++.+.....||+-|||.|.++--++.+++...+.
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~A 87 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 334455566667779999999888877666655544443
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=58.69 E-value=3.3 Score=41.93 Aligned_cols=55 Identities=15% Similarity=0.360 Sum_probs=3.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008231 450 FWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSML 504 (573)
Q Consensus 450 ~~lv~~~~l~g~~~~~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~ 504 (573)
++.++..++.|+..+......+.+..+.++++.|..+..++.++-.+|-.+|..+
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ------------------HHHH---------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677889999999999999999999999989888888888777777777665
No 298
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=55.28 E-value=48 Score=23.74 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 76 TNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 76 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
+.......+.....|+..|++++.++...+...+..+
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3445556667778899999987886655554444443
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=54.61 E-value=2.8e+02 Score=29.07 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=27.2
Q ss_pred hhhhhhhheeecccCchhHHHHHHHHHHHHHHHHHHHH
Q 008231 465 FVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSS 502 (573)
Q Consensus 465 ~~~~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~ 502 (573)
+..+...-..+|..|++.|....|+-|..+..-..+--
T Consensus 402 ~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ 439 (503)
T KOG2601|consen 402 MFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKD 439 (503)
T ss_pred hccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHH
Confidence 33445455678889999999999998887765444433
No 300
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=49.84 E-value=54 Score=26.99 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=20.3
Q ss_pred HHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 008231 79 MGTLNLLGLLGGFLADAKLGRYLTVAIFASVTAL 112 (573)
Q Consensus 79 ~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 112 (573)
.+...+...+.|..-|+.++-++.+.+.+++..+
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 3344455567788888876776655554444433
No 301
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=48.18 E-value=1.1e+02 Score=34.04 Aligned_cols=67 Identities=12% Similarity=0.048 Sum_probs=57.2
Q ss_pred chhhHHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHHHHHhhhHHHHHHhhhhhc
Q 008231 144 ANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQD 216 (573)
Q Consensus 144 ~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~~~~~l~~ 216 (573)
..+.+...++.--+++|++..+......=+.-+++|++. |+.+.+++.....+|..+...+...+..
T Consensus 453 ~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 453 TNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred CCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677778888889999999998888888888999999 9999999999999999999888865543
No 302
>PF12832 MFS_1_like: MFS_1 like family
Probab=47.78 E-value=38 Score=26.29 Aligned_cols=31 Identities=19% Similarity=0.094 Sum_probs=24.7
Q ss_pred cccccchhhHHHHHHHHHhhhhhhhhhhccc
Q 008231 372 PSGSLSAFLFITILLFTSLNEKVFVPLARKI 402 (573)
Q Consensus 372 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~r~ 402 (573)
..+.+.++..+..++..|+.+++.|+..+++
T Consensus 36 ~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 36 QIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 4566777888888999999999988876653
No 303
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=38.13 E-value=5.6e+02 Score=27.84 Aligned_cols=43 Identities=16% Similarity=0.049 Sum_probs=39.0
Q ss_pred hhhhheeecccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008231 468 VGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDK 510 (573)
Q Consensus 468 ~~~~~~~~~~~p~~~rg~~~gi~~~~~~lg~~ig~~~~~~i~~ 510 (573)
-..|.++.|..+.+...+..++.....++|.++++.+..++.+
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999888875
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=35.28 E-value=5.3e+02 Score=26.76 Aligned_cols=107 Identities=17% Similarity=0.083 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHH----HHHHHHHHHHHHH-HH
Q 008231 44 SERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTV----AIFASVTALVVGL-LT 118 (573)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~----~~~~~~~~~~~~~-~~ 118 (573)
.....+--....+..|+. |=+..|.+.+++.|.+...+++...-++.|.- ---+-+ +.|++...-..++ ..
T Consensus 21 a~GlvyElal~tLatyLl---G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~ 96 (508)
T COG4262 21 ACGLVYELALGTLATYLL---GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLL 96 (508)
T ss_pred HhHHHHHHHHHHHHHHhc---CCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHH
Confidence 333444434444555654 66778889999999999999988888777653 111111 1222211111111 12
Q ss_pred hhccCCCCCCCCCccccccccccccchhhHHHHHHHHHHHHHhcCccccccccccccC
Q 008231 119 SATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSD 176 (573)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~ 176 (573)
|+.... +..+.++++-+++|.-.|...|....+...
T Consensus 97 FA~~~~----------------------~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 97 FALESA----------------------PSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhccc----------------------hHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 332100 355678888889999999999998888766
No 305
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=27.98 E-value=3.3e+02 Score=26.85 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHH
Q 008231 148 QLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNR 195 (573)
Q Consensus 148 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 195 (573)
....+++.-++.|.+.-+..++.--+--| +++.+|++ -|..+|+
T Consensus 203 ~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhE-yK~~~pk~---ig~~Fg~ 246 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFFLWGIQGVILNLPHE-YKGYNPKK---IGIQFGL 246 (267)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhcChhh-hcCCCcce---ehhHHHH
Confidence 46667788888888887777665444444 44444332 4555544
No 306
>PRK11469 hypothetical protein; Provisional
Probab=27.03 E-value=5.1e+02 Score=23.99 Aligned_cols=78 Identities=14% Similarity=0.186 Sum_probs=45.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHHHHHHHHHHHh-HHHHHhhhccchhHHHHHHHHH
Q 008231 31 GWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGL-LGGFLADAKLGRYLTVAIFASV 109 (573)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~-~~G~laDr~~Grr~~~~~~~~~ 109 (573)
.++....+.++.-++.++. ++.. .-.|.+.-....+.++..+....... ++.++++++ |||.-++-|.++
T Consensus 104 ~~~~~l~LaiAtSiDAlav-Gi~~-------~~~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~-g~~a~~lgG~iL 174 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAV-GVGL-------AFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSII-GKKAEILGGLVL 174 (188)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHH-------HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 4456666666666665553 1211 11344555555666666555554444 444556665 888888888887
Q ss_pred HHHHHHHH
Q 008231 110 TALVVGLL 117 (573)
Q Consensus 110 ~~~~~~~~ 117 (573)
..+|.-.+
T Consensus 175 I~iGi~il 182 (188)
T PRK11469 175 IGIGVQIL 182 (188)
T ss_pred HHHHHHHH
Confidence 77776443
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=25.70 E-value=1.9e+02 Score=29.85 Aligned_cols=98 Identities=10% Similarity=-0.013 Sum_probs=60.1
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccccccccccchhhHH
Q 008231 70 KSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQL 149 (573)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (573)
-.|.+-++..+.++++.+..|++--++ .|+.-++++..-...+..+.-.+.+ .+.
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~t------------------------~~I 326 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQT------------------------QHI 326 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhcc------------------------cce
Confidence 345666778888999999999998776 6664444443322222222222211 355
Q ss_pred HHHHHHHHHHHhcCccccccccccccCCCCCCCchHHHhHHHHHHHHHH
Q 008231 150 AMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYF 198 (573)
Q Consensus 150 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 198 (573)
+..+++-.+...-.....+.+..-+++....+. -|-.||+..+
T Consensus 327 w~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNTF 369 (433)
T KOG3810|consen 327 WVCYAGYVLFRVIYQLTITIATFQIARNLSSEL------FGLVFGINTF 369 (433)
T ss_pred ehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHHH
Confidence 666666666666566666666666666666555 6777777644
No 308
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=24.97 E-value=4.9e+02 Score=23.60 Aligned_cols=40 Identities=30% Similarity=0.293 Sum_probs=23.3
Q ss_pred HHHHHHHHhhhcCCC------chhhhHHHHHHHHHHHHHHhHHHHH
Q 008231 53 SMNLVTYLVGDLHLS------SAKSATIVTNFMGTLNLLGLLGGFL 92 (573)
Q Consensus 53 ~~~l~~yl~~~~~~s------~~~~~~~~~~~~~~~~~~~~~~G~l 92 (573)
.++.|.-+++-.|++ .....|.-....+.....+++.|..
T Consensus 39 ~PNApY~lTDliHL~~~~~~~~~~~~W~~~~~l~~~~~~gll~G~~ 84 (168)
T PF07099_consen 39 LPNAPYMLTDLIHLSFNGIYRQNPPIWFDFLLLLSFALFGLLLGFL 84 (168)
T ss_pred cCCchHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 466655555556666 3344455555666666666666644
No 309
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=23.31 E-value=1.5e+02 Score=24.65 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=37.8
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHh
Q 008231 69 AKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTS 119 (573)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 119 (573)
...|-+.+.|...+.+.++++++..|+. -.-+-=.+|..+..+|..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 6678899999999999999999999997 5555555666555555554443
No 310
>PRK10263 DNA translocase FtsK; Provisional
Probab=22.66 E-value=5.9e+02 Score=31.22 Aligned_cols=17 Identities=12% Similarity=0.219 Sum_probs=7.9
Q ss_pred hhHHHHHHhhhhhcccc
Q 008231 203 GSLFAVIVLVYVQDNVG 219 (573)
Q Consensus 203 g~~~~~~~~~~l~~~~g 219 (573)
|+++|..+..++...+|
T Consensus 143 GGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cchHHHHHHHHHHHHHh
Confidence 44444444444444444
No 311
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=22.42 E-value=4.5e+02 Score=30.06 Aligned_cols=32 Identities=16% Similarity=0.011 Sum_probs=22.9
Q ss_pred HHHhh---hccchhHHHHHHHHHHHHHHHHHHhhc
Q 008231 90 GFLAD---AKLGRYLTVAIFASVTALVVGLLTSAT 121 (573)
Q Consensus 90 G~laD---r~~Grr~~~~~~~~~~~~~~~~~~~~~ 121 (573)
+-++| ++.||.+-++++.++++++++...+..
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~ 78 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF 78 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555 455788888888888888877766653
No 312
>PRK02237 hypothetical protein; Provisional
Probab=22.19 E-value=2.1e+02 Score=23.90 Aligned_cols=50 Identities=14% Similarity=0.007 Sum_probs=36.9
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHh
Q 008231 69 AKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTS 119 (573)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 119 (573)
+..|-+.+.|...+.+.++++++..|+. -.-+-=.+|..+..+|..+..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhee
Confidence 4588999999999999999999999987 4444445565555555544433
Done!