BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008232
(573 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RX22|MIP1_ARATH MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1
SV=1
Length = 711
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 313/557 (56%), Positives = 400/557 (71%), Gaps = 26/557 (4%)
Query: 1 MGCTVREKHIRTTRRTRSVKPEFDP-CCYLDKASISKSILESGLKPLSYHLGLNDP-SHN 58
MGCTVREKH++ TRR ++ DP C+++K ++S+SI+E+ L YH GL D S N
Sbjct: 1 MGCTVREKHVKPTRRIKAAAFRSDPPLCWVEKIAMSQSIVEN----LVYHPGLTDSGSVN 56
Query: 59 SNP---NADDHGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDEDVALKAILKNGHC 115
N N +++ W YCTEE LEEILLK+LEFLYN+A+SKL+ LGY+E VALKA+L NGHC
Sbjct: 57 LNSVTENPEENFWAYCTEEHLEEILLKHLEFLYNQAVSKLLELGYEERVALKAVLSNGHC 116
Query: 116 YGGMDVLTNILHNSLAYLNSSSTSGGNGNTSSVNSEDSEPVFNDLRQLEEYSLAGMVCLL 175
YG +DVLTNI++NSL+YLNS G ++ + +E F DLR LEEYSLAGM+ LL
Sbjct: 117 YGELDVLTNIVNNSLSYLNSGGGGG---GSNGNGEDRTETGFTDLRDLEEYSLAGMIYLL 173
Query: 176 QQVRPHLSKGDAMWCLLMSDLHVGRASSIEIP-GTNVCGGTISNNVDSVSNGG---VNGV 231
QQV+P+LSKGDAMWCLLMS+LHVGRAS++++P + C +NV+ V GG + G
Sbjct: 174 QQVKPNLSKGDAMWCLLMSELHVGRASTLDVPTNRSSCCTKEDSNVEDVGTGGTLDIAGF 233
Query: 232 VAPALCRFHGGWGFGSGGNAEFSVNGFFSYSAEMTLPRDIECPKRFNLSPSMKSLLKRNV 291
+APALCRFHGGWGFG+GG EFS NGF AE+ L R+I+CPKRFNLSPSMKSLLKRNV
Sbjct: 234 MAPALCRFHGGWGFGNGGGPEFSGNGFSMKGAELKLQREIDCPKRFNLSPSMKSLLKRNV 293
Query: 292 AMFAAGFRASSKQGHSQPQACVS-VMAGRDASLVAS-GAEVTVENCEDSKNLKDPNGVDS 349
A FAAG+RAS KQ Q + A D ++V S G + E+S V +
Sbjct: 294 AAFAAGYRASMKQKQIQSSDTIGDSKACNDPAIVKSCGQQPRKSGSEES--------VST 345
Query: 350 VLSKMRDLNIDENLETITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSN 409
VL K RDLN+D+NLE++ D KD ++V +LHQ+KD E++VKERKEWA + AMQAA+K+S
Sbjct: 346 VLEKFRDLNLDDNLESVGVDDKDCVIVDLLHQVKDFEKKVKERKEWAQKNAMQAAQKVSE 405
Query: 410 DLTELKMLRMEREETQRLKKGKQTLEDTTMKRLSEMENALRKASGQVDRANAAVRRLETE 469
+L ELK L ERE Q LKKGKQ +E++T KR ++ E LRKA Q DRAN VR+LE +
Sbjct: 406 ELAELKTLSSEREGIQLLKKGKQAVEESTAKRFTDKEIELRKACSQNDRANVIVRKLENQ 465
Query: 470 NAEIRAEMEASKLSAAESVTTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKEL 529
NAEIRAE E SKLSA+ES+ C+E +K+EKKCLK+L+AWEKQ KLQ+EI EKEKIK L
Sbjct: 466 NAEIRAEREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKIKAL 525
Query: 530 QQCLARIQQDQKETEVR 546
+ LA+I + +KE E +
Sbjct: 526 YKTLAQITEYEKEIEAK 542
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 120/180 (66%)
Query: 366 ITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSNDLTELKMLRMEREETQ 425
I +++DE+++ ++ ++KDL++++++ +WA+QK QA +L D ELK LR E+EE +
Sbjct: 459 IPRNKRDELILKLVPRMKDLQKELQDWTDWANQKVKQATVRLLKDQPELKALRKEKEEAE 518
Query: 426 RLKKGKQTLEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIRAEMEASKLSAA 485
+K KQ LE+ T+KR SEME AL A+ Q++R N +RRLE E + ++ E EA+ + A+
Sbjct: 519 EFRKEKQLLEENTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRAS 578
Query: 486 ESVTTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKELQQCLARIQQDQKETEV 545
ES +C E +R ++ LK +WE QK LQEE+ ++++K+ LQQ +A+ + Q + E
Sbjct: 579 ESAESCREAKERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAKTRQNQIEA 638
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 63 ADDHGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDEDVALKAILKNGHCYGGMDVL 122
+D GW LE +L NL L+ A+++++ GY EDV LKAI + GG D++
Sbjct: 81 SDSVGWDDPFACHLEGLLSSNLLTLFRSAMNQIMDCGYSEDVVLKAISSSRFYCGGTDLV 140
Query: 123 TNILHNSLAYLNSSSTSGGNGNTSSVNSEDSEPVFNDLRQLEEYSLAGMVCLLQQVRPHL 182
+NI++++L++L S G+ + VF DL+QL YSL + L+++VRP L
Sbjct: 141 SNIVNDTLSFLKSGKKVAGSRDY----------VFEDLQQLVAYSLVEKISLVREVRPSL 190
Query: 183 SKGDAMWCLLMSDLHVGRASSIEIPG 208
S +AMW LL+ DL+V +A ++ G
Sbjct: 191 STDEAMWRLLICDLNVLKAFEVDADG 216
>sp|Q9ZVT8|RF4_ARATH Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana
GN=RF4 PE=3 SV=1
Length = 823
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 117/182 (64%)
Query: 366 ITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSNDLTELKMLRMEREETQ 425
+ D+KDE+++ ++ ++ DL+ +++ +WA+QK +A +L D ELK LR EREE +
Sbjct: 489 VPRDKKDELILKLVPRVNDLQNELQVWTDWANQKVKEATGRLLKDQPELKALRKEREEAE 548
Query: 426 RLKKGKQTLEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIRAEMEASKLSAA 485
+ KK KQ LE+ T KRLSEM+ AL+ A+ Q+++A RLE E + ++ EMEA+K+ A
Sbjct: 549 QYKKEKQLLEENTRKRLSEMDFALKNATSQLEKAFNTAHRLELEQSILKKEMEAAKIKAV 608
Query: 486 ESVTTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKELQQCLARIQQDQKETEV 545
ES + E +R ++ LK + +WE QK LQEE+ ++EK+ LQ+ + + + Q + E
Sbjct: 609 ESAESFREAKERGERSLKDIHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIEA 668
Query: 546 RL 547
L
Sbjct: 669 AL 670
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 87 LYNEAISKLVALGYDEDVALKAILKNGHCYGGMDVLTNILHNSLAYLNSSSTSGGNGNTS 146
L+ + + +L+ LGY +D LKA+ + GG ++L+NI++N+L+ L + G+G+
Sbjct: 108 LFLDTMKQLIDLGYTDDEVLKAVSRCRLYCGGNNLLSNIVNNTLSALKTGDEGAGSGDY- 166
Query: 147 SVNSEDSEPVFNDLRQLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASSIEI 206
VF DL+QL Y+L M+ L+++VRP LS +AMW LLM DL+V +A E
Sbjct: 167 ---------VFEDLQQLVSYTLVEMISLIKEVRPSLSTVEAMWRLLMCDLNVLQAFEAEG 217
Query: 207 PG 208
G
Sbjct: 218 DG 219
>sp|Q1DUF9|INO80_COCIM Putative DNA helicase INO80 OS=Coccidioides immitis (strain RS)
GN=INO80 PE=3 SV=1
Length = 1662
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 346 GVDSVLSKMRDLNIDENLETITDDQKDEIVVTMLHQIKDLERQVKE----RKEWAHQKAM 401
+ S LSK R L +E ++ I+ E + L QI L+ E +EW ++ M
Sbjct: 259 AMPSPLSKSRKLVDEEEIDKISR----ENIARALEQIDALDNSDVEAPGFEQEW--ERYM 312
Query: 402 QAARKLSNDLTELKMLRMEREETQRLKKGKQTLEDTTMK------RLSE----MENALRK 451
+RK + +L ++ + +R T+ L K + E ++ R+ E ME ++
Sbjct: 313 AKSRKRARELDAIEGRKRKRRRTEFLGKLAKMFEKQALQGIERFNRIHEAEVQMEVQQKE 372
Query: 452 ASGQVDRANAAVRRLETENAEIRAEMEASKLSAAESVTTCLEVAKREKKCLKRLLAWEKQ 511
+ +R R+ EN +R EME KL+AA+ +E E +
Sbjct: 373 IQEEKERKKDMQRKRRRENT-VRHEME--KLNAAQKKANKIED--------------EAE 415
Query: 512 KAKLQEEIANEKEKIKELQQCLARIQQDQKETEV 545
K KL +EIA K+KIK+ L R + Q+ +EV
Sbjct: 416 KQKLAKEIARSKKKIKDTTLALERGEASQEISEV 449
>sp|Q5RD60|CACO1_PONAB Calcium-binding and coiled-coil domain-containing protein 1
OS=Pongo abelii GN=CALCOCO1 PE=2 SV=1
Length = 691
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 348 DSVLSKMRDLN-IDENLETITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARK 406
+ VL+K +L+ + + ++ +T +Q+ +L Q+K+++ KE+ E Q A Q +
Sbjct: 242 EKVLTKEVELDRLRDTVKALTREQE-----KLLGQLKEVQAD-KEQSEAELQVAQQENHR 295
Query: 407 LSNDLTELKMLRMERE-ETQRLKKGKQTLEDT---TMKRLSEMENALRKASGQVDRANAA 462
L+ DL E K + E+ + QRLK ++DT +R++E+E + G + A ++
Sbjct: 296 LNLDLKEAKSWQKEQSAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGAQELATSS 355
Query: 463 VRRLETENAEIRAEMEASKLSAAESVTTCLEVAK------------REKKCLKRLLAWEK 510
++ E+ + A + AE + LEVA+ +E+KC W K
Sbjct: 356 QQKATLLGEELASAAAARDRTIAELHRSRLEVAEVNGRLAELGLHLKEEKC-----QWSK 410
Query: 511 QKAKLQEEIANEKEKIKELQQCLARIQQ 538
++A L + + EK+KI +L + R+++
Sbjct: 411 ERAGLLQSVEAEKDKILKLSAEILRLEK 438
>sp|A7E2Y1|MYH7B_HUMAN Myosin-7B OS=Homo sapiens GN=MYH7B PE=2 SV=3
Length = 1941
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 27/240 (11%)
Query: 306 HSQPQACVSVMAGRDASLVASGAE---VTVENCEDSKNLKDPNGVDSVLSKMRDLNIDEN 362
H Q QA R ASL+A+ E +E E S+ L + +L LN+ +
Sbjct: 1675 HEQAQAL-----ERRASLLAAELEELRAALEQGERSRRLAE----QELLEATERLNLLHS 1725
Query: 363 LETITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSNDLTELKMLRMERE 422
T +QK ++ + ++E +ER+E A +KA +A +++ + L+ E++
Sbjct: 1726 QNTGLLNQKKKLEADLAQLSGEVEEAAQERRE-AEEKAKKA---ITDAAMMAEELKKEQD 1781
Query: 423 ETQRLKKGKQTLEDTTMK---RLSEMENA-LRKASGQVDRANAAVRRLETENAEIRAEME 478
+ L++ K+TLE T + RL E E A LR QV + A VR LE AE++
Sbjct: 1782 TSAHLERMKKTLEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELE-------AELD 1834
Query: 479 ASKLSAAESVTTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKELQQCLARIQQ 538
A + AE++ + +R K+ + K A++Q+ + + K+K ++ +Q
Sbjct: 1835 AEQKKHAEALKGVRKHERRVKELAYQAEEDRKNLARMQDLVDKLQSKVKSYKRQFEEAEQ 1894
>sp|Q9JKY5|HIP1R_MOUSE Huntingtin-interacting protein 1-related protein OS=Mus musculus
GN=Hip1r PE=1 SV=2
Length = 1068
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 33/247 (13%)
Query: 321 ASLVASGAEVTVENCEDSKNLKDPNGVDSVLSKMRDLNIDENLETITDDQKDEI------ 374
+S +G V V + D + PNG + RDL I ENL+ + + E+
Sbjct: 322 SSAPPAGEPVVVADLFD-QTFGPPNGS---MKDDRDLQI-ENLKREVETLRAELEKIKME 376
Query: 375 ----VVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSNDLTELKMLRME-------REE 423
+ + Q+ LE +++E+++ QKA+ +L ++L +LK L++E REE
Sbjct: 377 AQRYISQLKGQVNGLEAELEEQRKQK-QKALVDNEQLRHELAQLKALQLEGARNQGLREE 435
Query: 424 TQRLKKGKQTLEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIRAEMEASKLS 483
+R K + + +L E + L ++ R NA + T + + E+ K
Sbjct: 436 AER----KASATEARYSKLKEKHSELINTHAELLRKNADTAKQLTVTQQSQEEVARVK-- 489
Query: 484 AAESVTTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKELQQCLARIQQDQKET 543
E + +E AKRE + ++ Q KL+ E+A ++ Q+ L+R +Q E
Sbjct: 490 --EQLAFQMEQAKRESEM--KMEEQSDQLEKLKRELAARAGELARAQEALSRTEQSGSEL 545
Query: 544 EVRLICL 550
RL L
Sbjct: 546 SSRLDTL 552
>sp|Q9P1Z2|CACO1_HUMAN Calcium-binding and coiled-coil domain-containing protein 1 OS=Homo
sapiens GN=CALCOCO1 PE=1 SV=2
Length = 691
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 348 DSVLSKMRDLN-IDENLETITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARK 406
+ VL+K +L+ + + ++ +T +Q+ +L Q+K+++ KE+ E Q A Q
Sbjct: 242 EKVLTKEVELDRLRDTVKALTREQE-----KLLGQLKEVQAD-KEQSEAELQVAQQENHH 295
Query: 407 LSNDLTELKMLRMERE-ETQRLKKGKQTLEDT---TMKRLSEMENALRKASGQVDRANAA 462
L+ DL E K + E+ + QRLK ++DT +R++E+E + G + A ++
Sbjct: 296 LNLDLKEAKSWQEEQSAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGAQELAASS 355
Query: 463 VRRLETENAEIRAEMEASKLSAAESVTTCLEVAK------------REKKCLKRLLAWEK 510
++ E+ + A + AE + LEVA+ +E+KC W K
Sbjct: 356 QQKATLLGEELASAAAARDRTIAELHRSRLEVAEVNGRLAELGLHLKEEKC-----QWSK 410
Query: 511 QKAKLQEEIANEKEKIKELQQCLARIQQ 538
++A L + + EK+KI +L + R+++
Sbjct: 411 ERAGLLQSVEAEKDKILKLSAEILRLEK 438
>sp|A2AQP0|MYH7B_MOUSE Myosin-7B OS=Mus musculus GN=Myh7b PE=3 SV=1
Length = 1941
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 369 DQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSNDLTELKMLRMEREETQRLK 428
+QK ++ V + ++E +ER+E A +KA +A +++ + L+ E++ + L+
Sbjct: 1732 NQKKKLEVDLAQLSGEVEEAAQERRE-AEEKAKKA---ITDAAMMAEELKKEQDTSAHLE 1787
Query: 429 KGKQTLEDTTMK---RLSEMENA-LRKASGQVDRANAAVRRLETENAEIRAEMEASKLSA 484
+ K+TLE T + RL E E A LR QV + A VR LE AE++A +
Sbjct: 1788 RMKKTLEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELE-------AELDAEQKKH 1840
Query: 485 AESVTTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKELQQCLARIQQ 538
AE++ + +R K+ + + K A++Q+ + + K+K ++ +Q
Sbjct: 1841 AEALKGVRKHERRVKELVYQTEEDRKNLARMQDLVDKLQSKVKSYKRQFEEAEQ 1894
>sp|P46504|YLX8_CAEEL Uncharacterized protein F23F12.8 OS=Caenorhabditis elegans
GN=F23F12.8 PE=4 SV=2
Length = 980
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 325 ASGAEVTVENCEDSKNLKDPNGVDSVLSKMRDLNIDENLETITDDQKDEIVVTMLHQIKD 384
G T+ E D GV+ + + + + N +T+T++ E + +LH I
Sbjct: 248 VQGMPHTLAPYEKMDRRPDSFGVEELTTMTPEYTVRYNGQTMTEN---EFLNQLLH-IVQ 303
Query: 385 LERQVKERKEWAHQKAMQAARKLSNDLTELKMLRMEREETQRLKKGKQTLEDTTMKRLSE 444
++ V ER++ + M+ R LR E+EE R + ++ LE++ R +E
Sbjct: 304 HQKTVSERQQQEKFEKMEQER-----------LRQEKEEKARELERRRKLEESETARQAE 352
Query: 445 MENALRKASGQVDRANAAVRRLE--------TENAEIRAE---MEASKLSAAESVTTCLE 493
++ + Q A R LE EN +R E ME SK+ E + LE
Sbjct: 353 LDRQATIYAEQERMAMERNRELERIRLEEKKRENERVRQEEIAMEISKIRELERLQ--LE 410
Query: 494 VAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKELQQCLARIQQDQKETEVR 546
++ ++ + L A +K KLQEE E+ +++QQ ++Q +++ E R
Sbjct: 411 RQRKNERVRQELEA--ARKYKLQEE-----ERQRKIQQQKVEMEQIRQQEEAR 456
>sp|P49025|CTRO_MOUSE Citron Rho-interacting kinase OS=Mus musculus GN=Cit PE=1 SV=3
Length = 2055
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 46/220 (20%)
Query: 370 QKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSNDL---------------TEL 414
Q+D+ + +LH I++ R+++E KE +Q ++ R + N L +EL
Sbjct: 529 QEDDKALQLLHDIREQSRKLQEIKEQEYQAQVEEMRLMMNQLEEDLVSARRRSDLYESEL 588
Query: 415 KMLRMEREETQR--------LKKGK-------------QTLEDTTMKRLSEMENALRKAS 453
+ R+ EE +R L K K + + ++ E++ L KA
Sbjct: 589 RESRLAAEEFKRKANECQHKLMKAKDQGKPEVGEYSKLEKINAEQQLKIQELQEKLEKAV 648
Query: 454 GQVDRANAAVRRLETENAEIRAEMEASKL----SAAESVTTCLEVAKREKKCL----KRL 505
A ++ + A+ RAE E KL ++E + L A+ + L KRL
Sbjct: 649 KASTEATELLQNI--RQAKERAERELEKLHNREDSSEGIKKKLVEAEERRHSLENKVKRL 706
Query: 506 LAWEKQKAKLQEEIANEKEKIKELQQCLARIQQDQKETEV 545
E+++ +L+++I + E+I+++ + +++ +E +V
Sbjct: 707 ETMERRENRLKDDIQTKSEQIQQMADKILELEEKHREAQV 746
>sp|Q7TT50|MRCKB_MOUSE Serine/threonine-protein kinase MRCK beta OS=Mus musculus
GN=Cdc42bpb PE=1 SV=2
Length = 1713
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 352 SKMRDLN-IDENLE-TITDDQKDEIVVTMLHQIKDLERQ---VKERKEWAHQKAMQAARK 406
SKM D N ++ LE T+T Q+ E H++K LE+Q ++ KE H++ ++A+ +
Sbjct: 499 SKMADSNRLERQLEDTVTLRQEHE---DSTHRLKGLEKQYRLARQEKEELHKQLVEASER 555
Query: 407 LSNDLTELKMLRMER-----------EETQRLKKGKQTLEDTTMKRLSEMENALRKASGQ 455
L + ELK +R E L+ KQ + + EME A++K
Sbjct: 556 LKSQTKELKDAHQQRKRALQEFSELNERMSELRSLKQKVSRQLRDKEEEMEVAMQK---- 611
Query: 456 VDRANAAVRRLETENAEIRAEMEASKLSAAE 486
+D +R+ E E+ A +E + A++
Sbjct: 612 IDSMRQDLRKSEKSRKELEARLEDAAAEASK 642
>sp|Q8N4C6|NIN_HUMAN Ninein OS=Homo sapiens GN=NIN PE=1 SV=4
Length = 2090
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 31/174 (17%)
Query: 364 ETITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARK-LSNDLTELKMLRMERE 422
ET+ ++ +V+T ER++ E+ H +M R+ L DL +L+ +
Sbjct: 878 ETLKREKTTSLVLTQ-------EREMLEKTYKEHLNSMVVERQQLLQDLEDLRNVS---- 926
Query: 423 ETQRLKKGKQTLE-DTTMKR-LSEMENALRKASGQVDRANAAVRRLETENAEIRAEMEAS 480
ETQ+ Q LE ++ KR L E E L +A A+ + RLE E+ + R EM S
Sbjct: 927 ETQQSLLSDQILELKSSHKRELREREEVLCQAGASEQLASQRLERLEMEHDQERQEM-MS 985
Query: 481 KLSAAESV--TTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIKELQQC 532
KL A E++ TC E A RE +A++ EI+ + KIKE+QQ
Sbjct: 986 KLLAMENIHKATC-ETADRE-------------RAEMSTEISRLQSKIKEMQQA 1025
>sp|Q99323|MYSN_DROME Myosin heavy chain, non-muscle OS=Drosophila melanogaster GN=zip PE=1
SV=2
Length = 2057
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 408 SNDLTELKMLRMEREETQRLKKGKQTLEDTTMKRLSEMENALRKASGQVDRANAAVRRLE 467
+NDL++ L E E+ + L K K E T ++E+E L K Q ++ + R++E
Sbjct: 1092 ANDLSQ--TLAEEEEKAKHLAKLKAKHEAT----ITELEERLHKDQQQRQESDRSKRKIE 1145
Query: 468 TENAEIRAEMEASKLSAAESVTTCLEVAKREKKCLKRLLAWEKQKAKLQEEIANEKEKIK 527
TE A+++ ++ ++ E ++AKRE++ + LL +++ A A ++ +
Sbjct: 1146 TEVADLKEQLNERRVQVDEMQA---QLAKREEELTQTLLRIDEESAT----KATAQKAQR 1198
Query: 528 ELQQCLARIQQD 539
EL+ LA IQ+D
Sbjct: 1199 ELESQLAEIQED 1210
>sp|P51834|SMC_BACSU Chromosome partition protein Smc OS=Bacillus subtilis (strain 168)
GN=smc PE=1 SV=3
Length = 1186
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 434 LEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIRAEMEASKLS---------- 483
LED T KRL+EME +V +++ +E + A++R E +L
Sbjct: 679 LEDVT-KRLAEMEEKTALLEQEVKTLKHSIQDMEKKLADLRETGEGLRLKQQDVKGQLYE 737
Query: 484 ---AAESVTTCLEVAKREKKCLKRLLAWEK-QKAKLQEEIANEKEKIKELQQCLARIQQD 539
A +++ T LE+ +EK L K +K KL+EE++ EK+K+L++ + R+ +
Sbjct: 738 LQVAEKNINTHLELYDQEKSALSESDEERKVRKRKLEEELSAVSEKMKQLEEDIDRLTK- 796
Query: 540 QKETE 544
QK+T+
Sbjct: 797 QKQTQ 801
>sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens
GN=EPS15 PE=1 SV=2
Length = 896
Score = 33.5 bits (75), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 444 EMENALRKASGQVDRANAAVRRLETENAEIRAEMEASKLSAAESVTTCLEVAKREKKCLK 503
E+ + L + Q++ VR+ E A++ + ++A S ++T E + ++ L
Sbjct: 396 ELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELS 455
Query: 504 RLLAWEKQKAKLQEEIANEKEKIKELQQCLARIQQDQKETEVRLI 548
RL +++ A+L+E + + K +++ LQQ L QQ+ +++L+
Sbjct: 456 RL---QQETAELEESVESGKAQLEPLQQHLQDSQQEISSMQMKLM 497
>sp|Q2KJ21|CACO1_BOVIN Calcium-binding and coiled-coil domain-containing protein 1 OS=Bos
taurus GN=CALCOCO1 PE=2 SV=1
Length = 680
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 100/199 (50%), Gaps = 20/199 (10%)
Query: 354 MRDLNID---ENLETITDDQKDEIVVTMLHQIKDLERQVKERKEWAHQKAMQAARKLSND 410
M+++ +D ++++ +T +Q+ +L Q+K+++ KE+ E Q A Q R+L+ +
Sbjct: 246 MKEVELDRVRDSVKALTREQE-----KLLGQLKEVQAD-KEQSEAELQMAQQENRRLNLE 299
Query: 411 LTELKMLRMERE-ETQRLKKGKQTLEDT---TMKRLSEMENALRKASGQVDRANAAVRRL 466
L E K + E+ + QRLK ++DT +R++E+E + G + A ++ ++
Sbjct: 300 LQEAKDRQEEQSAQAQRLKDKVAQMKDTLGQVQQRVAELEPLKEQLRGAQELAASSQQKA 359
Query: 467 ETENAEIRAEMEASKLSAAESVTTCLEVAKREKKCLKRLL-------AWEKQKAKLQEEI 519
E+ + A + AE + LEVA + + L W K++A L + +
Sbjct: 360 ALLGEELASAAGARDRTIAELHRSRLEVAGVNGRLAELSLHLKEEKSQWSKERAGLLQSV 419
Query: 520 ANEKEKIKELQQCLARIQQ 538
EK+KI +L + R+++
Sbjct: 420 EAEKDKILKLSAEILRLEK 438
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 201,259,548
Number of Sequences: 539616
Number of extensions: 8459706
Number of successful extensions: 45393
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 1599
Number of HSP's that attempted gapping in prelim test: 39747
Number of HSP's gapped (non-prelim): 5882
length of query: 573
length of database: 191,569,459
effective HSP length: 123
effective length of query: 450
effective length of database: 125,196,691
effective search space: 56338510950
effective search space used: 56338510950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)