Query 008233
Match_columns 573
No_of_seqs 286 out of 2324
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 21:19:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008233.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008233hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 1.9E-90 6.4E-95 763.2 56.4 485 26-533 2-499 (605)
2 1yuw_A Heat shock cognate 71 k 100.0 4.4E-89 1.5E-93 745.5 59.0 493 26-532 4-500 (554)
3 2kho_A Heat shock protein 70; 100.0 1.4E-87 4.7E-92 740.4 50.6 483 27-532 3-498 (605)
4 3d2f_A Heat shock protein homo 100.0 1.6E-86 5.5E-91 736.8 55.8 491 27-532 3-514 (675)
5 2v7y_A Chaperone protein DNAK; 100.0 9.6E-82 3.3E-86 682.3 53.9 458 27-532 3-467 (509)
6 3i33_A Heat shock-related 70 k 100.0 4.7E-66 1.6E-70 545.8 45.2 379 24-413 21-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 9.5E-65 3.3E-69 534.1 45.4 373 26-412 18-394 (394)
8 4gni_A Putative heat shock pro 100.0 3.3E-64 1.1E-68 532.3 41.5 378 23-413 10-403 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.6E-62 5.6E-67 515.0 40.4 368 27-412 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 1.3E-42 4.5E-47 358.5 22.4 308 26-412 3-327 (344)
11 2fsj_A Hypothetical protein TA 100.0 1E-28 3.4E-33 253.9 12.7 230 139-409 95-343 (346)
12 2ych_A Competence protein PILM 99.9 2.1E-27 7.3E-32 247.8 18.9 305 25-398 12-341 (377)
13 3h1q_A Ethanolamine utilizatio 99.9 3.6E-26 1.2E-30 227.5 23.1 201 143-408 71-272 (272)
14 1k8k_A ARP3, actin-like protei 99.9 1.2E-26 4.1E-31 245.4 17.6 225 164-409 107-386 (418)
15 4a2a_A Cell division protein F 99.9 1.8E-24 6E-29 227.1 25.9 197 178-410 168-393 (419)
16 2fxu_A Alpha-actin-1, actin, a 99.9 2.6E-25 9E-30 231.5 16.7 220 165-409 101-348 (375)
17 2zgy_A Plasmid segregation pro 99.9 1.7E-23 5.8E-28 213.1 13.4 226 138-408 73-319 (320)
18 3dob_A Heat shock 70 kDa prote 99.9 3E-22 1E-26 178.9 14.9 108 425-532 2-109 (152)
19 3dqg_A Heat shock 70 kDa prote 99.9 6.9E-22 2.4E-26 176.3 15.9 108 425-532 2-109 (151)
20 3h0x_A 78 kDa glucose-regulate 99.9 4.1E-22 1.4E-26 178.4 14.0 108 425-532 2-109 (152)
21 3n8e_A Stress-70 protein, mito 99.9 1.3E-21 4.5E-26 179.6 13.9 113 420-532 17-129 (182)
22 4e81_A Chaperone protein DNAK; 99.9 4.8E-21 1.6E-25 181.9 15.3 109 424-532 2-110 (219)
23 2op6_A Heat shock 70 kDa prote 99.8 1.8E-20 6.2E-25 168.6 16.1 108 425-532 2-109 (152)
24 1q5l_A Chaperone protein DNAK; 99.8 6.6E-21 2.3E-25 167.0 9.3 113 420-532 14-126 (135)
25 1k8k_B ARP2, actin-like protei 99.8 3.7E-20 1.3E-24 193.6 5.5 215 165-409 105-363 (394)
26 1u00_A HSC66, chaperone protei 99.8 1.9E-18 6.3E-23 165.7 16.8 107 426-532 1-107 (227)
27 4ehu_A Activator of 2-hydroxyi 99.8 2.7E-19 9.2E-24 178.1 10.0 182 189-412 68-256 (276)
28 3js6_A Uncharacterized PARM pr 99.7 6.2E-18 2.1E-22 173.6 12.2 209 165-413 114-339 (355)
29 4apw_A ALP12; actin-like prote 99.6 2.7E-16 9.1E-21 160.1 4.5 202 165-411 106-325 (329)
30 3qb0_A Actin-related protein 4 99.5 2.5E-13 8.7E-18 143.9 19.7 178 27-275 24-209 (498)
31 3dwl_A Actin-related protein 3 99.5 1E-14 3.4E-19 153.1 5.7 223 165-409 124-395 (427)
32 4fo0_A Actin-related protein 8 99.1 3.4E-09 1.2E-13 116.5 23.6 118 141-276 170-294 (593)
33 2d0o_A DIOL dehydratase-reacti 99.1 4.7E-11 1.6E-15 123.8 4.1 195 178-409 368-603 (610)
34 1nbw_A Glycerol dehydratase re 99.0 6.8E-11 2.3E-15 123.1 4.3 194 179-409 371-605 (607)
35 1hux_A Activator of (R)-2-hydr 98.8 4.1E-07 1.4E-11 89.4 19.2 72 335-411 186-257 (270)
36 2ews_A Pantothenate kinase; PA 98.2 0.0001 3.5E-09 72.3 20.4 76 328-408 207-286 (287)
37 4am6_A Actin-like protein ARP8 97.9 5E-05 1.7E-09 81.5 10.8 95 165-276 222-318 (655)
38 2i7n_A Pantothenate kinase 1; 97.2 0.0041 1.4E-07 62.6 14.1 47 362-408 306-358 (360)
39 3mdq_A Exopolyphosphatase; str 97.1 0.034 1.2E-06 55.3 19.6 81 178-269 90-170 (315)
40 1t6c_A Exopolyphosphatase; alp 96.9 0.0097 3.3E-07 59.3 13.1 80 178-269 98-177 (315)
41 3vgl_A Glucokinase; ROK family 96.6 0.27 9.1E-06 48.9 21.7 44 190-243 96-139 (321)
42 2ivn_A O-sialoglycoprotein end 96.4 0.87 3E-05 45.3 24.9 51 362-412 245-300 (330)
43 3r8e_A Hypothetical sugar kina 96.1 0.63 2.2E-05 46.1 20.8 48 362-409 261-318 (321)
44 2qm1_A Glucokinase; alpha-beta 96.0 0.33 1.1E-05 48.1 18.6 50 362-411 263-322 (326)
45 2itm_A Xylulose kinase, xylulo 96.0 0.0098 3.3E-07 63.2 7.4 80 329-413 357-437 (484)
46 3l0q_A Xylulose kinase; xlylul 95.9 0.014 4.8E-07 63.0 8.3 82 327-413 408-492 (554)
47 3eno_A Putative O-sialoglycopr 95.9 0.46 1.6E-05 47.5 18.7 69 340-413 233-306 (334)
48 2zf5_O Glycerol kinase; hypert 95.9 0.014 4.7E-07 62.2 7.8 79 329-413 365-443 (497)
49 4bc3_A Xylulose kinase; transf 95.8 0.018 6.3E-07 61.9 8.4 78 334-413 407-484 (538)
50 3hz6_A Xylulokinase; xylulose, 95.6 0.02 6.8E-07 61.2 7.8 50 362-413 403-453 (511)
51 4db3_A Glcnac kinase, N-acetyl 95.5 2.1 7.1E-05 42.4 21.7 47 362-408 270-324 (327)
52 3ll3_A Gluconate kinase; xylul 95.4 0.025 8.6E-07 60.3 7.8 79 329-413 364-443 (504)
53 3i8b_A Xylulose kinase; strain 95.4 0.018 6.3E-07 61.5 6.7 79 329-413 395-474 (515)
54 2ch5_A NAGK protein; transfera 95.2 2.7 9.4E-05 41.7 26.1 45 163-207 70-117 (347)
55 3g25_A Glycerol kinase; IDP007 95.1 0.027 9.4E-07 59.9 6.8 81 329-414 374-455 (501)
56 2dpn_A Glycerol kinase; thermu 95.1 0.039 1.3E-06 58.6 7.9 80 329-413 368-448 (495)
57 3vov_A Glucokinase, hexokinase 95.0 2.9 9.8E-05 40.9 22.5 49 362-410 238-295 (302)
58 1u6z_A Exopolyphosphatase; alp 95.0 0.11 3.9E-06 55.2 11.3 77 180-269 99-176 (513)
59 3ezw_A Glycerol kinase; glycer 95.0 0.046 1.6E-06 58.6 8.2 82 328-414 371-453 (526)
60 3ifr_A Carbohydrate kinase, FG 95.0 0.024 8.2E-07 60.5 5.9 79 329-413 371-450 (508)
61 2p3r_A Glycerol kinase; glycer 94.9 0.025 8.4E-07 60.4 5.8 80 329-413 371-451 (510)
62 3jvp_A Ribulokinase; PSI-II, N 94.8 0.026 9.1E-07 61.1 5.8 79 329-413 410-490 (572)
63 3h3n_X Glycerol kinase; ATP-bi 94.8 0.035 1.2E-06 59.2 6.6 80 329-413 373-453 (506)
64 4e1j_A Glycerol kinase; struct 94.7 0.025 8.4E-07 60.6 5.3 81 329-413 393-475 (520)
65 3en9_A Glycoprotease, O-sialog 94.5 2.5 8.4E-05 45.2 20.3 184 163-386 72-273 (540)
66 2d4w_A Glycerol kinase; alpha 94.3 0.085 2.9E-06 56.2 8.2 80 329-413 373-453 (504)
67 2w40_A Glycerol kinase, putati 94.2 0.089 3E-06 56.0 8.0 80 329-413 376-457 (503)
68 1z6r_A MLC protein; transcript 94.1 2.5 8.6E-05 43.2 18.7 50 362-411 335-394 (406)
69 2uyt_A Rhamnulokinase; rhamnos 93.9 0.06 2E-06 57.1 6.1 78 327-410 361-439 (489)
70 1z05_A Transcriptional regulat 92.9 5.6 0.00019 40.9 19.1 44 190-243 208-251 (429)
71 2ap1_A Putative regulator prot 92.9 4.5 0.00015 39.8 17.7 44 190-243 120-163 (327)
72 3cer_A Possible exopolyphospha 92.6 0.21 7.1E-06 50.2 7.3 86 179-269 104-191 (343)
73 3bex_A Type III pantothenate k 92.4 1.6 5.4E-05 41.5 12.9 22 26-47 3-24 (249)
74 3h6e_A Carbohydrate kinase, FG 91.4 0.29 1E-05 51.6 7.0 70 335-410 363-435 (482)
75 3hi0_A Putative exopolyphospha 90.5 1 3.5E-05 47.7 10.2 78 178-268 101-178 (508)
76 3o8m_A Hexokinase; rnaseh-like 87.0 8.4 0.00029 40.2 14.0 58 176-245 184-243 (485)
77 3qbx_A Anhydro-N-acetylmuramic 86.0 2.4 8E-05 42.6 8.8 69 340-411 265-337 (371)
78 2yhx_A Hexokinase B; transfera 83.4 9.6 0.00033 39.5 12.4 55 178-244 164-220 (457)
79 3cqy_A Anhydro-N-acetylmuramic 82.2 3.4 0.00012 41.4 8.0 73 335-411 267-343 (370)
80 2e2o_A Hexokinase; acetate and 79.2 3.5 0.00012 40.0 7.0 49 361-410 239-287 (299)
81 3ttc_A HYPF, transcriptional r 77.5 7 0.00024 42.4 9.2 50 361-410 599-651 (657)
82 4g9i_A Hydrogenase maturation 77.0 5.7 0.0002 44.1 8.5 62 345-411 694-760 (772)
83 3vth_A Hydrogenase maturation 76.4 3.9 0.00013 45.3 6.9 53 361-413 693-750 (761)
84 3hz6_A Xylulokinase; xylulose, 75.3 1.7 5.9E-05 46.0 3.7 22 23-44 2-23 (511)
85 1nu0_A Hypothetical protein YQ 74.0 3.3 0.00011 35.3 4.5 22 25-46 2-23 (138)
86 3hm8_A Hexokinase-3; glucose, 73.3 35 0.0012 35.0 12.7 57 176-244 159-218 (445)
87 3cj1_A Ectonucleoside triphosp 73.2 22 0.00074 36.8 11.3 81 193-274 150-252 (456)
88 3aap_A Ectonucleoside triphosp 72.7 6 0.0002 39.6 6.7 51 191-244 108-158 (353)
89 3l0q_A Xylulose kinase; xlylul 72.4 2 6.9E-05 46.0 3.4 23 22-44 1-23 (554)
90 3i8b_A Xylulose kinase; strain 71.8 2.7 9.3E-05 44.5 4.2 23 22-44 1-23 (515)
91 1iv0_A Hypothetical protein; r 70.6 3.1 0.00011 33.2 3.2 19 27-45 2-20 (98)
92 4e1j_A Glycerol kinase; struct 70.1 2.9 9.9E-05 44.4 3.9 22 23-44 23-44 (520)
93 3epq_A Putative fructokinase; 70.1 27 0.00093 33.8 10.8 51 180-243 90-140 (302)
94 2gup_A ROK family protein; sug 69.0 16 0.00055 35.0 8.8 49 362-410 228-287 (292)
95 3zx3_A Ectonucleoside triphosp 68.1 46 0.0016 34.3 12.3 125 147-273 89-243 (452)
96 3h3n_X Glycerol kinase; ATP-bi 67.8 3.2 0.00011 43.8 3.7 22 24-45 3-24 (506)
97 3ven_A O-carbamoyltransferase 67.4 10 0.00035 40.4 7.3 66 343-413 294-360 (576)
98 1vhx_A Putative holliday junct 67.4 3.4 0.00012 35.8 3.1 20 26-45 3-22 (150)
99 3f9m_A Glucokinase; hexokinase 66.9 31 0.0011 35.7 10.8 57 176-244 183-242 (470)
100 3ifr_A Carbohydrate kinase, FG 66.9 4.1 0.00014 43.1 4.2 23 23-45 4-26 (508)
101 3jvp_A Ribulokinase; PSI-II, N 66.7 3.1 0.00011 44.7 3.3 23 23-45 2-24 (572)
102 1cza_N Hexokinase type I; stru 64.8 72 0.0025 36.1 14.2 57 176-244 630-689 (917)
103 1bdg_A Hexokinase; phosphotran 64.7 1E+02 0.0035 31.7 14.3 63 170-244 165-229 (451)
104 3g25_A Glycerol kinase; IDP007 63.5 4.4 0.00015 42.7 3.7 21 24-44 4-24 (501)
105 3mcp_A Glucokinase; structural 63.2 81 0.0028 31.4 12.8 21 24-44 7-27 (366)
106 3ll3_A Gluconate kinase; xylul 62.1 4.3 0.00015 42.9 3.3 21 25-45 3-23 (504)
107 4htl_A Beta-glucoside kinase; 62.0 16 0.00055 35.2 7.3 50 362-411 238-292 (297)
108 3h6e_A Carbohydrate kinase, FG 62.0 3.5 0.00012 43.2 2.6 20 25-44 5-24 (482)
109 3ezw_A Glycerol kinase; glycer 61.9 4.5 0.00015 42.9 3.4 19 26-44 4-22 (526)
110 2aa4_A Mannac kinase, putative 60.0 13 0.00044 35.6 6.1 48 362-409 234-287 (289)
111 2zf5_O Glycerol kinase; hypert 59.8 5.4 0.00019 41.9 3.6 21 25-45 2-22 (497)
112 4bc3_A Xylulose kinase; transf 58.5 5.6 0.00019 42.3 3.4 21 25-45 9-29 (538)
113 3djc_A Type III pantothenate k 57.0 7.1 0.00024 37.3 3.5 71 328-409 182-254 (266)
114 1hjr_A Holliday junction resol 56.7 13 0.00043 32.5 4.8 18 27-44 2-19 (158)
115 2p3r_A Glycerol kinase; glycer 56.2 6.8 0.00023 41.3 3.6 19 26-44 3-21 (510)
116 2w40_A Glycerol kinase, putati 55.6 6.2 0.00021 41.6 3.2 20 26-45 4-23 (503)
117 2uyt_A Rhamnulokinase; rhamnos 53.8 7.2 0.00025 40.9 3.3 20 25-44 3-22 (489)
118 3cet_A Conserved archaeal prot 53.4 12 0.00041 36.8 4.5 71 329-407 244-321 (334)
119 1zbs_A Hypothetical protein PG 52.2 6 0.00021 38.2 2.2 69 336-411 211-281 (291)
120 1zc6_A Probable N-acetylglucos 51.9 8.8 0.0003 37.3 3.4 65 336-410 227-293 (305)
121 2dpn_A Glycerol kinase; thermu 51.6 7.6 0.00026 40.8 3.0 20 26-45 2-21 (495)
122 4ep4_A Crossover junction endo 50.1 17 0.00058 31.9 4.6 18 27-44 2-19 (166)
123 2hoe_A N-acetylglucosamine kin 47.9 46 0.0016 33.2 8.2 48 362-409 315-370 (380)
124 3htv_A D-allose kinase, alloki 47.2 52 0.0018 31.8 8.2 50 361-410 239-299 (310)
125 3o8m_A Hexokinase; rnaseh-like 46.8 53 0.0018 34.1 8.5 29 225-253 79-108 (485)
126 2d4w_A Glycerol kinase; alpha 44.9 12 0.00042 39.2 3.4 19 27-45 3-21 (504)
127 1saz_A Probable butyrate kinas 41.8 36 0.0012 34.1 6.2 49 361-409 295-347 (381)
128 2itm_A Xylulose kinase, xylulo 41.6 13 0.00046 38.7 3.0 17 28-44 2-18 (484)
129 2yhx_A Hexokinase B; transfera 41.5 86 0.0029 32.3 9.1 51 225-275 60-117 (457)
130 2q2r_A Glucokinase 1, putative 39.2 44 0.0015 33.2 6.4 20 25-44 28-47 (373)
131 3zyy_X Iron-sulfur cluster bin 38.8 52 0.0018 35.4 7.0 58 324-382 498-555 (631)
132 2f9w_A Pantothenate kinase; CO 38.5 23 0.00078 33.8 3.8 24 24-47 21-45 (271)
133 1hnj_A Beta-ketoacyl-acyl carr 36.1 39 0.0013 32.6 5.3 48 336-386 212-259 (317)
134 2h3g_X Biosynthetic protein; p 36.0 24 0.00081 33.6 3.5 73 328-410 180-252 (268)
135 1zxo_A Conserved hypothetical 35.5 4.1 0.00014 39.4 -2.0 68 337-409 210-277 (291)
136 3nuw_A 2-OXO-3-deoxygalactonat 34.8 26 0.00089 33.8 3.6 44 363-409 248-291 (295)
137 2e2o_A Hexokinase; acetate and 33.9 25 0.00087 33.7 3.4 58 164-237 60-118 (299)
138 1msz_A DNA-binding protein smu 33.6 28 0.00096 26.8 2.8 28 167-194 34-61 (86)
139 1nbw_A Glycerol dehydratase re 33.5 18 0.00062 38.1 2.3 34 165-198 131-164 (607)
140 1zbs_A Hypothetical protein PG 32.8 28 0.00096 33.4 3.5 44 163-207 59-104 (291)
141 3epq_A Putative fructokinase; 31.8 70 0.0024 30.8 6.2 50 361-410 224-289 (302)
142 2yhw_A Bifunctional UDP-N-acet 30.5 1.2E+02 0.0041 29.4 7.9 44 190-243 131-174 (343)
143 3t69_A Putative 2-dehydro-3-de 29.9 30 0.001 33.9 3.1 48 363-413 260-307 (330)
144 4htl_A Beta-glucoside kinase; 29.0 31 0.0011 33.1 3.2 44 190-243 97-140 (297)
145 1ub7_A 3-oxoacyl-[acyl-carrier 28.8 54 0.0019 31.7 4.9 46 338-386 216-261 (322)
146 2ebd_A 3-oxoacyl-[acyl-carrier 28.7 56 0.0019 31.3 5.0 45 339-386 207-251 (309)
147 1zxo_A Conserved hypothetical 27.7 27 0.00092 33.5 2.4 44 164-208 58-103 (291)
148 3zyy_X Iron-sulfur cluster bin 26.6 1.8E+02 0.0061 31.2 8.7 98 225-377 205-305 (631)
149 3nq4_A 6,7-dimethyl-8-ribityll 25.7 47 0.0016 28.7 3.2 45 339-384 25-70 (156)
150 3hm8_A Hexokinase-3; glucose, 25.4 1.9E+02 0.0066 29.5 8.3 29 225-254 58-86 (445)
151 4am6_A Actin-like protein ARP8 24.9 30 0.001 37.3 2.2 30 23-52 37-66 (655)
152 3lm2_A Putative kinase; struct 24.0 33 0.0011 31.7 2.1 19 22-40 2-20 (226)
153 3f9m_A Glucokinase; hexokinase 23.9 1E+02 0.0035 31.8 6.0 24 225-248 76-99 (470)
154 1mzj_A Beta-ketoacylsynthase I 23.8 56 0.0019 31.9 3.9 43 340-385 229-271 (339)
155 1zow_A 3-oxoacyl-[acyl-carrier 23.5 62 0.0021 31.1 4.1 46 338-386 208-253 (313)
156 2ap1_A Putative regulator prot 23.5 1.9E+02 0.0064 27.8 7.7 52 224-275 22-73 (327)
157 2gup_A ROK family protein; sug 23.4 41 0.0014 32.0 2.8 42 190-243 94-135 (292)
158 1bdg_A Hexokinase; phosphotran 23.1 2.1E+02 0.0072 29.2 8.2 23 225-247 67-89 (451)
159 1saz_A Probable butyrate kinas 23.0 72 0.0024 31.9 4.6 21 26-46 2-22 (381)
160 2x3e_A 3-oxoacyl-[acyl-carrier 22.8 59 0.002 31.6 3.8 44 339-385 221-264 (331)
161 3cer_A Possible exopolyphospha 22.5 3.4E+02 0.012 26.5 9.4 38 225-262 15-55 (343)
162 1sz2_A Glucokinase, glucose ki 21.7 55 0.0019 31.9 3.4 21 24-44 12-32 (332)
163 2qm1_A Glucokinase; alpha-beta 21.4 1.9E+02 0.0065 27.6 7.3 27 225-251 5-31 (326)
164 1sz2_A Glucokinase, glucose ki 20.1 1.4E+02 0.0049 28.8 6.1 70 162-236 65-149 (332)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.9e-90 Score=763.21 Aligned_cols=485 Identities=29% Similarity=0.480 Sum_probs=459.3
Q ss_pred CeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEe-CCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCC
Q 008233 26 EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFK-DEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDT 103 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~-~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~ 103 (573)
..+||||||||||+||++.+|.++++.|.+|++.+||+|+|. ++++++| ..|+.+ ..+|.++++++|||+|+.++
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG---~~A~~~~~~~p~~ti~~~KrllG~~~~ 78 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVG---QPAKRQAVTNPQNTLFAIKRLIGRRFQ 78 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEES---HHHHHTTTTCGGGEECCGGGTTTCBTT
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEec---HHHHHHHHhCCCcEehhhHHhhCCCCC
Confidence 469999999999999999999999999999999999999996 5689999 999999 99999999999999999999
Q ss_pred Chhhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHH
Q 008233 104 DPVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTR 182 (573)
Q Consensus 104 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~ 182 (573)
++.++. .+.+||+++.. .++.+.+. ++|. .++|+++++++|++|++.|+.+++.++.++|||||++|++.||++
T Consensus 79 d~~v~~~~~~~p~~~~~~-~~g~~~~~--~~~~--~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a 153 (605)
T 4b9q_A 79 DEEVQRDVSIMPFKIIAA-DNGDAWVE--VKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153 (605)
T ss_dssp SHHHHHHHTTCSSEEEEC-TTSBEEEE--ETTE--EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred CHHHHHHhhcCCeEEEEc-CCCceEEE--ECCE--EECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 999999 89999999887 67888887 7765 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeC----CeEEEEEeecc
Q 008233 183 IERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAG----GVSQIKALSGS 258 (573)
Q Consensus 183 l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~----~~~~v~~~~g~ 258 (573)
+++|++.|||+++++++||+|||++|+..... .+.++||||+||||||+|++++.+ +.++++++.|+
T Consensus 154 ~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~---------~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd 224 (605)
T 4b9q_A 154 TKDAGRIAGLEVKRIINEPTAAALAYGLDKGT---------GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGD 224 (605)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCC---------SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEE
T ss_pred HHHHHHHcCCceEEEeCcHHHHHHHhhhhccC---------CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCC
Confidence 99999999999999999999999999877643 268999999999999999999988 89999999999
Q ss_pred c-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecC----CeeEEEEEcHHH
Q 008233 259 A-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGN----GLKVSKNVTREE 332 (573)
Q Consensus 259 ~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~----g~d~~~~itr~~ 332 (573)
. +||++||++|++|+.++|+++++.++..+++.+.+|+.+||++|+.||...++.+.++ +.. +.++.++|||++
T Consensus 225 ~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~ 304 (605)
T 4b9q_A 225 THLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 304 (605)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHH
T ss_pred CCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHH
Confidence 9 9999999999999999999999988889999999999999999999999999999888 433 367899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhc
Q 008233 333 FEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTS 412 (573)
Q Consensus 333 fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~ 412 (573)
|+++++|+++++..+++++|+++++...+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.++
T Consensus 305 ~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~ 383 (605)
T 4b9q_A 305 LESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (605)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999 78888899999999999999999998
Q ss_pred CCCCCCCCCceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEE
Q 008233 413 GINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFK 492 (573)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~ 492 (573)
+. .+++.+.|++|++||+++.+|.+.+||++|++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.
T Consensus 384 ~~-----~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~ 458 (605)
T 4b9q_A 384 GD-----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFN 458 (605)
T ss_dssp TS-----SCSEEEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred CC-----CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEE
Confidence 84 4689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCCCCEEEEEEEEcCCccEEEEEEEcCCCCCCCc
Q 008233 493 ITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPV 533 (573)
Q Consensus 493 i~~~~~~~~g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~~ 533 (573)
+.++||.+.|.++|+|+|++|.||+|+|++.++.+|++.++
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i 499 (605)
T 4b9q_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKI 499 (605)
T ss_dssp EECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECC
T ss_pred EeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEE
Confidence 99999999999999999999999999999999999988663
No 2
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=4.4e-89 Score=745.49 Aligned_cols=493 Identities=36% Similarity=0.579 Sum_probs=463.0
Q ss_pred CeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCCC
Q 008233 26 EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDTD 104 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~~ 104 (573)
..+||||||||||+||++.+|+++++.+++|++++||+|+|.+++++|| .+|+.+ ..+|.++++++|||+|+.+++
T Consensus 4 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG---~~A~~~~~~~p~~ti~~~KrllG~~~~d 80 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIG---DAAKNQVAMNPTNTVFDAKRLIGRRFDD 80 (554)
T ss_dssp CCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEET---HHHHTTTTTCGGGEECCGGGTTTCCSSC
T ss_pred CCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEc---HHHHHhhhhChhhehHhhHHhcCCCCCc
Confidence 3689999999999999999999999999999999999999988899999 999999 999999999999999999999
Q ss_pred hhhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHH
Q 008233 105 PVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRI 183 (573)
Q Consensus 105 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l 183 (573)
+.++. .+.+||.++.. ++.+.+.+...+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++
T Consensus 81 ~~v~~~~~~~p~~v~~~--~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~ 158 (554)
T 1yuw_A 81 AVVQSDMKHWPFMVVND--AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAT 158 (554)
T ss_dssp SHHHHHHTTCSSEEEEE--TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHhhcCCeEEEec--CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 99988 89999999854 7888887555677778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cch
Q 008233 184 ERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGG 262 (573)
Q Consensus 184 ~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG 262 (573)
++|++.||++++++++||+|||++|+...... .+.++||||+||||||+|++++.++.++++++.|+. +||
T Consensus 159 ~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~--------~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG 230 (554)
T 1yuw_A 159 KDAGTIAGLNVLRIINEPTAAAIAYGLDKKVG--------AERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGG 230 (554)
T ss_dssp HHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCS--------SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSH
T ss_pred HHHHHHcCCCeEEEeCcHHHHHHHHHhhccCC--------CCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCH
Confidence 99999999999999999999999998765321 368999999999999999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecCCeeEEEEEcHHHHHHHHHHHH
Q 008233 263 EDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVF 341 (573)
Q Consensus 263 ~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~g~d~~~~itr~~fe~l~~~~~ 341 (573)
++||++|++|+.++|+++++.++..+++.+.+|+.+||++|+.||...++.+.++ +.+|.++..+|+|++|+++++|++
T Consensus 231 ~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~ 310 (554)
T 1yuw_A 231 EDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLF 310 (554)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999988888999999999999999999999999999998 788889999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcCCCCCCCCC
Q 008233 342 EKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL 421 (573)
Q Consensus 342 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~~~~~~~~~ 421 (573)
+++.++++++|+++++.+.+|+.|+|+||+|++|+|++.|++.|++.++....||++|||+|||++|+.+++... ++.+
T Consensus 311 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~-~~~~ 389 (554)
T 1yuw_A 311 RGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS-ENVQ 389 (554)
T ss_dssp HHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCC-CCTT
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCcc-cccc
Confidence 999999999999999999999999999999999999999999997788888999999999999999999887311 3356
Q ss_pred ceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCCCC
Q 008233 422 DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPK 501 (573)
Q Consensus 422 ~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~~~ 501 (573)
++.+.|++|++||+++.++.+.+||++|+++|++++..|++..|+|+.+.|.+|||+.....+|..||+|.+.++|+.+.
T Consensus 390 ~~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~ 469 (554)
T 1yuw_A 390 DLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPR 469 (554)
T ss_dssp SSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCST
T ss_pred ceEEEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 502 GVPEINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 502 g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
|.++|+|+|++|.||+|+|++.++.+|++..
T Consensus 470 g~~~i~v~f~id~~gil~v~a~~~~tg~~~~ 500 (554)
T 1yuw_A 470 GVPQIEVTFDIDANGILNVSAVDKSTGKENK 500 (554)
T ss_dssp TCCCEEEEEEECTTCCEEEEEEETTTCCEEE
T ss_pred cccEEEEEEEEccCceEEEEEEeccCCCcee
Confidence 9999999999999999999999999998644
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.4e-87 Score=740.38 Aligned_cols=483 Identities=30% Similarity=0.486 Sum_probs=452.8
Q ss_pred eEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEE-eCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCCC
Q 008233 27 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTF-KDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDTD 104 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~-~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~~ 104 (573)
.+||||||||||+||++.+|.++++.|++|.+.+||+|+| .+++++|| .+|+.+ ..+|.++++++||++|+.+++
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG---~~A~~~~~~~p~~t~~~~Kr~iG~~~~d 79 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVG---QPAKRQAVTNPQNTLFAIKRLIGRRFQD 79 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEES---HHHHTTTTTCGGGEEECGGGTTTCBSSS
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEEC---HHHHHHhhhCCCCEeehhhHhhCCCCCc
Confidence 5899999999999999999999999999999999999999 45789999 999999 999999999999999999999
Q ss_pred hhhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHH
Q 008233 105 PVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRI 183 (573)
Q Consensus 105 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l 183 (573)
+.++. .+.+||+++.. .++.+.+. ++|. .++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++
T Consensus 80 ~~v~~~~~~~p~~~~~~-~~g~~~i~--~~g~--~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~ 154 (605)
T 2kho_A 80 EEVQRDVSIMPFKIIAA-DNGDAWVE--VKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQAT 154 (605)
T ss_dssp TTHHHHHHHCSSCEEEC-TTSBEEEE--ETTE--EECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHhhcCCeEEEEC-CCCceEEE--ECCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHH
Confidence 88888 78899998776 67888888 6774 5999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEe----CCeEEEEEeeccc
Q 008233 184 ERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATA----GGVSQIKALSGSA 259 (573)
Q Consensus 184 ~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~~~~g~~ 259 (573)
++|++.|||+++++++||+|||++|+..... .+.++||||+||||||+|++++. ++.++++++.|+.
T Consensus 155 ~~A~~~AGl~v~~li~EP~AAAlay~l~~~~---------~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~ 225 (605)
T 2kho_A 155 KDAGRIAGLEVKRIINEPTAAALAYGLDKGT---------GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDT 225 (605)
T ss_dssp HHHHHTTTCEEEEEEEHHHHHHHHTTTTSSS---------SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEES
T ss_pred HHHHHHcCCceEEEecCHHHHHHHhhhcccC---------CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCC
Confidence 9999999999999999999999999876531 27899999999999999999998 7899999999998
Q ss_pred -cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecC---C-eeEEEEEcHHHH
Q 008233 260 -IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGN---G-LKVSKNVTREEF 333 (573)
Q Consensus 260 -lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~---g-~d~~~~itr~~f 333 (573)
+||++||++|++|+.++|+++++.++..+++.+.+|+.+||++|+.||...++.+.++ +.+ | .++.++|||++|
T Consensus 226 ~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~f 305 (605)
T 2kho_A 226 HLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 305 (605)
T ss_dssp SCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHH
Confidence 9999999999999999999999988888999999999999999999999999999988 543 3 567889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcC
Q 008233 334 EEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 334 e~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~ 413 (573)
+++++|+++++.++++++|+++++...+|+.|+||||+|++|+|++.|++.| +..+....||++|||+|||++|+.+++
T Consensus 306 e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~ 384 (605)
T 2kho_A 306 ESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTG 384 (605)
T ss_dssp HTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999899999999999999999999999999 677888999999999999999998887
Q ss_pred CCCCCCCCceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEE
Q 008233 414 INDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKI 493 (573)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i 493 (573)
. .+++.+.|++|++||+++.++.+.+||++|++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.+
T Consensus 385 ~-----~~~~~l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l 459 (605)
T 2kho_A 385 D-----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNL 459 (605)
T ss_dssp S-----CCCCCCSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEE
T ss_pred C-----ccCceEEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEe
Confidence 3 46788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCEEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 494 TGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 494 ~~~~~~~~g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
.++|+.+.|.++|+|+|++|.||+|+|++.+..+|++.+
T Consensus 460 ~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~ 498 (605)
T 2kho_A 460 DGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQK 498 (605)
T ss_dssp ECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEE
T ss_pred cCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceee
Confidence 999999999999999999999999999999999998755
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.6e-86 Score=736.83 Aligned_cols=491 Identities=18% Similarity=0.262 Sum_probs=449.1
Q ss_pred eEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCCCh
Q 008233 27 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDTDP 105 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~~~ 105 (573)
.+||||||||||+||++.+++++++.|.+|++.+||+|+|.+++++|| ++|+.+ ..+|.++++++||+||+.++++
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG---~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 79 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLG---ETGKNKQTSNIKNTVANLKRIIGLDYHHP 79 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEET---HHHHHHHTTCGGGEECCHHHHTTCBTTCT
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEec---HHHHHhhhhChHhHHHHHHHHhCCCCCcH
Confidence 489999999999999999999999999999999999999988899999 999999 9999999999999999999999
Q ss_pred hhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHH
Q 008233 106 VVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIE 184 (573)
Q Consensus 106 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~ 184 (573)
.++. .+++||+++.. .+|.+.+.+...|+.+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||++++
T Consensus 80 ~v~~~~~~~p~~v~~~-~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~ 158 (675)
T 3d2f_A 80 DFEQESKHFTSKLVEL-DDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIA 158 (675)
T ss_dssp THHHHHTTCCSEEEEC-TTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhhCCeeEEEc-CCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHH
Confidence 9988 89999999876 578888775455766779999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchH
Q 008233 185 RACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGE 263 (573)
Q Consensus 185 ~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~ 263 (573)
+|++.|||+++++++||+|||++|+..+.... . ....+.++||||+||||||+|++++.++.++|+++.|+. +||+
T Consensus 159 ~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~--~-~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~ 235 (675)
T 3d2f_A 159 DAARIAGLNPVRIVNDVTAAGVSYGIFKTDLP--E-GEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGR 235 (675)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCC--C-SSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHcCCceEEEEcchHHHHHHHhhhccccc--c-ccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHH
Confidence 99999999999999999999999998653210 0 002378999999999999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecCCeeEEEEEcHHHHHHHHHHHHH
Q 008233 264 DLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFE 342 (573)
Q Consensus 264 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~g~d~~~~itr~~fe~l~~~~~~ 342 (573)
+||++|++|+.++|+++++.++..+++.+.+|+.+||++|+.||...++.+.++ +.+|.++.++|||++|+++++|+++
T Consensus 236 d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~ 315 (675)
T 3d2f_A 236 DFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLE 315 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHH
Confidence 999999999999999999988888999999999999999999999888899998 7788899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcCCCCCCCCCc
Q 008233 343 KCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLD 422 (573)
Q Consensus 343 ~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~~~~~~~~~~ 422 (573)
++..+++++|+++++++.+|+.|+||||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++. ++.++
T Consensus 316 ~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~~---~~v~~ 391 (675)
T 3d2f_A 316 RVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPT---LRVRP 391 (675)
T ss_dssp TTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCSS---CCCCC
T ss_pred HHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCCC---Ccccc
Confidence 9999999999999999999999999999999999999999999 6778889999999999999999999885 45678
Q ss_pred eEEeecccceeEEEecCC----eEEEEEcCCCCCCceeEEEEEeecCCCccEEEEE-EecCCcccc-cCceeEEEEEeCC
Q 008233 423 LLTIQVTPLGIGIRANGN----NFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIV-YEGEGEKVE-ENHLLGYFKITGI 496 (573)
Q Consensus 423 ~~~~~~~~~~igi~~~~~----~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i-~eg~~~~~~-~~~~lg~~~i~~~ 496 (573)
+.+.|++|++||+++.++ .+.+||++|++||++++.+|++..++ .+.+ |+|++..+. +|..||+|.+.++
T Consensus 392 ~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~----~~~~~~~ge~~~~~~~n~~lg~f~l~gi 467 (675)
T 3d2f_A 392 FKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF----SMAASYTDITQLPPNTPEQIANWEITGV 467 (675)
T ss_dssp CEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE----EEEEEESCGGGSCTTCCSEEEEEEEECC
T ss_pred eEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc----eEEEEEcCCcccccccCceeeEEEecCc
Confidence 999999999999999876 49999999999999999999987653 3444 678888887 8999999999999
Q ss_pred CCCCCCCC-EEEEEEEEcCCccEEEEEE----------EcCCCCCCC
Q 008233 497 PPSPKGVP-EINVCMDIDASSVLRVLVG----------VIMPGNPHP 532 (573)
Q Consensus 497 ~~~~~g~~-~i~v~~~id~~g~l~v~~~----------~~~~g~~~~ 532 (573)
|+.+.|.+ +|+|+|++|.||+|+|++. ++.+|++..
T Consensus 468 ~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~ 514 (675)
T 3d2f_A 468 QLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDD 514 (675)
T ss_dssp CCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEE
T ss_pred CCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceee
Confidence 99999975 9999999999999999996 566676544
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=9.6e-82 Score=682.31 Aligned_cols=458 Identities=33% Similarity=0.538 Sum_probs=427.8
Q ss_pred eEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCCCh
Q 008233 27 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDTDP 105 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~~~ 105 (573)
.+||||||||||++|++.++.++++++++|.+.+||+|+|.+++++|| ++|+.. ..+| ++++++||++|+.+
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG---~~A~~~~~~~p-~~~~~~Kr~lg~p~--- 75 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVG---EVAKRQAITNP-NTIISIKRHMGTDY--- 75 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEES---HHHHTTTTTCS-SEEECGGGTTTSCC---
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEEC---HHHHHhHHhCC-CcHHHHHHhcCCCc---
Confidence 689999999999999999999999999999999999999988889999 999998 8899 99999999999733
Q ss_pred hhhhcCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHH
Q 008233 106 VVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIER 185 (573)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~ 185 (573)
. +. ++|. .++|+++++++|++|++.|+.+++.++..+|||||++|++.||+++++
T Consensus 76 ----------~-----------~~--~~g~--~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~ 130 (509)
T 2v7y_A 76 ----------K-----------VE--IEGK--QYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKD 130 (509)
T ss_dssp ----------C-----------EE--ETTE--EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred ----------E-----------EE--ECCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 1 11 4453 489999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchHH
Q 008233 186 ACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 264 (573)
Q Consensus 186 Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~~ 264 (573)
|++.||++++++++||+|||++|+.... .+.++||||+||||||++++++.++.++++++.|+. +||++
T Consensus 131 a~~~AGl~~~~li~Ep~AAAlay~~~~~----------~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d 200 (509)
T 2v7y_A 131 AGRIAGLEVERIINEPTAAALAYGLDKE----------EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDD 200 (509)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTGGGS----------CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHH
T ss_pred HHHHcCCCeEEEecCHHHHHHHHhhccC----------CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHH
Confidence 9999999999999999999999987653 278999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecC---C-eeEEEEEcHHHHHHHHHH
Q 008233 265 LLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGN---G-LKVSKNVTREEFEEVNQK 339 (573)
Q Consensus 265 iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~---g-~d~~~~itr~~fe~l~~~ 339 (573)
||++|++|+.++|+++++.++..+++.+.+|+.+||++|+.||...++.+.++ +.+ | .++.++|||++|+++++|
T Consensus 201 ~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~ 280 (509)
T 2v7y_A 201 FDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAH 280 (509)
T ss_dssp HHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHH
Confidence 99999999999999998888888899999999999999999999998999888 543 3 467889999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcCCCCCCC
Q 008233 340 VFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFG 419 (573)
Q Consensus 340 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~~~~~~~ 419 (573)
+++++.++++++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|+.+++.
T Consensus 281 ~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----- 354 (509)
T 2v7y_A 281 LVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----- 354 (509)
T ss_dssp HHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC-----
Confidence 9999999999999999998889999999999999999999999999 6778889999999999999999999873
Q ss_pred CCceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCC
Q 008233 420 NLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPS 499 (573)
Q Consensus 420 ~~~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~ 499 (573)
.+++.+.|++|++||+++.++.+.+||++|+++|++++..|++..|+|+.+.|.+|||+.....+|..||+|.+.++|+.
T Consensus 355 ~~~~~~~dv~p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~ 434 (509)
T 2v7y_A 355 VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPA 434 (509)
T ss_dssp CCCCCCCCBCSSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCC
T ss_pred ccCceEEEeeccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 500 PKGVPEINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 500 ~~g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
++|.++|+++|++|.||+|+|++.+..+|++.+
T Consensus 435 ~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~ 467 (509)
T 2v7y_A 435 PRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQS 467 (509)
T ss_dssp CTTCSCEEEEEEECTTSCEEEEEEETTTCCEEE
T ss_pred CCcccEEEEEEEEcCCceEEEEEEEcCCCcEEE
Confidence 999999999999999999999999999998765
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=4.7e-66 Score=545.83 Aligned_cols=379 Identities=32% Similarity=0.514 Sum_probs=355.2
Q ss_pred CCCeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCC
Q 008233 24 FPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVD 102 (573)
Q Consensus 24 ~~~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~ 102 (573)
..+.+||||||||||++|++.++.++++.++.|++++||+|+|.++++++| ..|+.. ..+|.++++++||++|+.+
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG---~~A~~~~~~~~~~~~~~~Kr~lg~~~ 97 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIG---DAAKNQVAMNPTNTIFDAKRLIGRKF 97 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEET---HHHHHTTTTCSTTEECCGGGTTTCCT
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEec---HHHHHhhHhChhhhHHHHHHHhCCCC
Confidence 345799999999999999999999999999999999999999988899999 999999 8999999999999999999
Q ss_pred CChhhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHH
Q 008233 103 TDPVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLT 181 (573)
Q Consensus 103 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~ 181 (573)
+++.++. .+.+||.+... ++.+.+.+..+|....++|+++++++|++|++.++.+++..+.++|||||++|++.||+
T Consensus 98 ~~~~~~~~~~~~p~~~~~~--~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~ 175 (404)
T 3i33_A 98 EDATVQSDMKHWPFRVVSE--GGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQ 175 (404)
T ss_dssp TSHHHHHHHTTCSSEEEEE--TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHH
T ss_pred CcHHHHHHHhhCCceEEcc--CCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHH
Confidence 9999998 88999999875 78888886667777789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-c
Q 008233 182 RIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-I 260 (573)
Q Consensus 182 ~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-l 260 (573)
++++|++.||++++.+++||+|||++|+...... ...+..+||||+||||+|++++++.++.+++++..++. +
T Consensus 176 ~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~------~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~l 249 (404)
T 3i33_A 176 ATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGC------AGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL 249 (404)
T ss_dssp HHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCS------SSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTC
T ss_pred HHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccc------cCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCC
Confidence 9999999999999999999999999998765421 11378999999999999999999999999999999988 9
Q ss_pred chHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecCCeeEEEEEcHHHHHHHHHH
Q 008233 261 GGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQK 339 (573)
Q Consensus 261 GG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~g~d~~~~itr~~fe~l~~~ 339 (573)
||.+||++|++++.++|+++++.++..+++.+.+|+.+||++|+.||......+.++ +.+|.++.++|+|++|+++++|
T Consensus 250 GG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~ 329 (404)
T 3i33_A 250 GGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNAD 329 (404)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHH
Confidence 999999999999999999999988888999999999999999999999999999999 8899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcC
Q 008233 340 VFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 340 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~ 413 (573)
+++++.++|.++|+++++...+|+.|+|+||+|++|+|++.|++.|++.++....||++|||+|||++|+.+++
T Consensus 330 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 330 LFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999998999999999999999999999999998888889999999999999999998875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=9.5e-65 Score=534.12 Aligned_cols=373 Identities=32% Similarity=0.520 Sum_probs=353.3
Q ss_pred CeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCCC
Q 008233 26 EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDTD 104 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~~ 104 (573)
..+||||||||||++|++.++.++++.+..|++++||+|+|.++++++| +.|+.. ..+|.++++++|+++|+.+++
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG---~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 94 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIG---DAAKNQVAANPQNTIFDIKRLIGLKYND 94 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEES---HHHHHTGGGCGGGEECCGGGTTTCCTTC
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEec---HHHHHhhHhCcccCHHHHHHHhCCCCCc
Confidence 5789999999999999999999999999999999999999998899999 999999 899999999999999999999
Q ss_pred hhhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHH
Q 008233 105 PVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRI 183 (573)
Q Consensus 105 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l 183 (573)
+.++. .+.+||.+.. .++.+.+.+..++..+.++|+++++++|++|++.++.+++.++..+|||||++|++.||+++
T Consensus 95 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~ 172 (394)
T 3qfu_A 95 RSVQKDIKHLPFNVVN--KDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQAT 172 (394)
T ss_dssp HHHHHHHTTCSSEEEE--ETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHhhcCCeEEEc--CCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHH
Confidence 99998 8999999884 48888888656677788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cch
Q 008233 184 ERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGG 262 (573)
Q Consensus 184 ~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG 262 (573)
++|++.||++++.+++||+|||++|+..... .+..+||||+||||+|++++++.++.+++++..++. +||
T Consensus 173 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~---------~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG 243 (394)
T 3qfu_A 173 KDAGTIAGLNVLRIVNEPTAAAIAYGLDKSD---------KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGG 243 (394)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTTTSCS---------SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSH
T ss_pred HHHHHHcCCceEEEecCHHHHHHHHhhccCC---------CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCCh
Confidence 9999999999999999999999999776543 378999999999999999999999999999999988 999
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecCCeeEEEEEcHHHHHHHHHHHH
Q 008233 263 EDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVF 341 (573)
Q Consensus 263 ~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~g~d~~~~itr~~fe~l~~~~~ 341 (573)
.+||++|++++.++|+++++.++..+++.+.+|+.+||++|+.||......+.++ +.+|.++.++++|++|++++++++
T Consensus 244 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~ 323 (394)
T 3qfu_A 244 EDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLF 323 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999988888999999999999999999999999999999 889999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhc
Q 008233 342 EKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTS 412 (573)
Q Consensus 342 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~ 412 (573)
+++.++|.++|+++++...+|+.|+|+||+|++|+|++.|++.|++.++....||++|||+|||++|+.++
T Consensus 324 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 324 KKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999999999999999889999999999999999999999999888898999999999999999998764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=3.3e-64 Score=532.31 Aligned_cols=378 Identities=24% Similarity=0.323 Sum_probs=337.7
Q ss_pred CCCCeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCC
Q 008233 23 PFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRV 101 (573)
Q Consensus 23 ~~~~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~ 101 (573)
++.+.+||||||||||++|++.+++++++.+..|.+++||+|+|.++++++| .+|+.. .++|.++++++|+++|+.
T Consensus 10 ~m~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G---~~A~~~~~~~~~~~i~~~K~llg~~ 86 (409)
T 4gni_A 10 PGERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYG---QQAKNFLVRNPKNTVAYFRDILGQD 86 (409)
T ss_dssp ---CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEH---HHHHHHHHHCGGGEEESCGGGTTCC
T ss_pred CCCCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEc---HHHHHhhHhChHhhHHHHHHHhCCC
Confidence 3456899999999999999999999999999999999999999999999999 999999 999999999999999999
Q ss_pred CCChhhhhcCCCCeeEEEeeCCCccEEEEEec----CceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCH
Q 008233 102 DTDPVVHASKSLPFLVQTVDIGVRPFIAALVN----NAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSR 177 (573)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~ 177 (573)
++++.++.. ..++.+.. .++.+.+.+... +..+.++|+++++++|++|+++++.+++.++.++|||||++|++
T Consensus 87 ~~~~~~~~~-~~~~~~~~--~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~ 163 (409)
T 4gni_A 87 FKSVDPTHN-HASAHPQE--AGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTE 163 (409)
T ss_dssp GGGCCCGGG-TTSCCCEE--ETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCH
T ss_pred ccchhhhhh-ccccceec--CCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCH
Confidence 887765552 22333333 367777773211 24567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeec
Q 008233 178 FQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG 257 (573)
Q Consensus 178 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g 257 (573)
.||++|++|++.|||+++.+++||+|||++|+...... ..+..+||||+||||+|++++++.++.++++++.+
T Consensus 164 ~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~-------~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~ 236 (409)
T 4gni_A 164 KQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEAT-------ISDKIIVVADLGGSRSDVTVLASRSGMYTILATVH 236 (409)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC-------------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccC-------CCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecC
Confidence 99999999999999999999999999999998764211 24789999999999999999999999999999999
Q ss_pred cc-cchHHHHHHHHHHHHHhhhhhcC--CCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecCCeeEEEEEcHHHH
Q 008233 258 SA-IGGEDLLQNMMRHLMPNSESLFS--SYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEF 333 (573)
Q Consensus 258 ~~-lGG~~iD~~l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~g~d~~~~itr~~f 333 (573)
+. +||++||++|++++.++|..+++ .+...+++.+.+|+.+||++|+.||...++.+.++ +.+|.++.++|||++|
T Consensus 237 ~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~ 316 (409)
T 4gni_A 237 DYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRY 316 (409)
T ss_dssp ESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHH
Confidence 88 99999999999999999998888 77778899999999999999999999999999999 8899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCc-cc------cCCCCCccceehhHHH
Q 008233 334 EEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKV-EL------YEGINPLEAAVSGAAL 406 (573)
Q Consensus 334 e~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~-~i------~~~~~p~~aVA~GAa~ 406 (573)
+++++|+++++.++|+++|+++++...+|+.|+|+||+|++|+|++.|++.|+.. ++ ....||++|||+|||+
T Consensus 317 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~ 396 (409)
T 4gni_A 317 ETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAAL 396 (409)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999889999999999999999999999999654 45 5789999999999999
Q ss_pred HhHHhcC
Q 008233 407 EGAVTSG 413 (573)
Q Consensus 407 ~a~~~~~ 413 (573)
+|+....
T Consensus 397 ~~~~~~~ 403 (409)
T 4gni_A 397 QASLIQE 403 (409)
T ss_dssp HHHHHHC
T ss_pred Hhhhhhh
Confidence 9987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.6e-62 Score=515.05 Aligned_cols=368 Identities=27% Similarity=0.432 Sum_probs=336.6
Q ss_pred eEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEe-CCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCCC
Q 008233 27 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFK-DEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDTD 104 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~-~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~~ 104 (573)
.+||||||||||++|++.+|.++++.+++|.+++||+|+|. +++++|| ++|+.. ..+|.++++++|++||+.+++
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G---~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 79 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVG---QPAKRQAVTNPQNTLFAIKRLIGRRFQD 79 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEES---HHHHTTSTTCGGGEEECGGGTTTCBSCS
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEEC---HHHHHhhhhCccceeehhHHhhCCCCCc
Confidence 58999999999999999999999999999999999999995 5678999 999999 899999999999999999999
Q ss_pred hhhhh-cCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHH
Q 008233 105 PVVHA-SKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRI 183 (573)
Q Consensus 105 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l 183 (573)
+.++. .+.+||.+... .++.+.+. ++|. .++|+++++++|+++++.|+.+++.++.++|||||++|++.||+++
T Consensus 80 ~~~~~~~~~~p~~~~~~-~~~~~~~~--~~g~--~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~ 154 (383)
T 1dkg_D 80 EEVQRDVSIMPFKIIAA-DNGDAWVE--VKGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQAT 154 (383)
T ss_dssp HHHHHHTTTCSSEEEEC-SSSBEEEE--ETTE--EECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHH
T ss_pred HHHHHHhhcCCeEEEEc-CCCcEEEE--ECCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 88887 78899998766 67777777 6764 5999999999999999999999998899999999999999999999
Q ss_pred HHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEe----CCeEEEEEeeccc
Q 008233 184 ERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATA----GGVSQIKALSGSA 259 (573)
Q Consensus 184 ~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~~~~g~~ 259 (573)
++|++.||++++.+++||+|||++|+..... .+.++||||+||||||+++++.. ++.++++++.++.
T Consensus 155 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~---------~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~ 225 (383)
T 1dkg_D 155 KDAGRIAGLEVKRIINEPTAAALAYGLDKGT---------GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDT 225 (383)
T ss_dssp HHHHHHTTCEESCCCBHHHHHHHHHTCCC-C---------CEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEES
T ss_pred HHHHHHcCCceEEEeccHHHHHHHHHhccCC---------CCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCC
Confidence 9999999999999999999999999865431 36899999999999999999998 6788999998988
Q ss_pred -cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecC---C-eeEEEEEcHHHH
Q 008233 260 -IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGN---G-LKVSKNVTREEF 333 (573)
Q Consensus 260 -lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~---g-~d~~~~itr~~f 333 (573)
+||++||+.|++++.++++.+++.++..+++.+.+|+.+||++|+.||...+..+.++ +.+ | .++.++|+|++|
T Consensus 226 ~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~ 305 (383)
T 1dkg_D 226 HLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 305 (383)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHH
Confidence 9999999999999999999988888888899999999999999999999988888887 443 3 456789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhc
Q 008233 334 EEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTS 412 (573)
Q Consensus 334 e~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~ 412 (573)
+++++|+++++.++++++|+++++...+++.|+|+||+|++|+|++.|++.| +.++....||++|||+|||++|+.++
T Consensus 306 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 306 ESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999988889999999999999999999999999 66788899999999999999997653
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.3e-42 Score=358.51 Aligned_cols=308 Identities=17% Similarity=0.205 Sum_probs=236.0
Q ss_pred CeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCC--c-eEEcCChHHHhhh-ccCccchhhHhhHhcCCC
Q 008233 26 EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDE--V-PAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRV 101 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~--~-~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~ 101 (573)
+.+|||||||+||++++..++ .++ .+||+|+|.++ . .++| ++|+.. .++|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG---~~A~~~~~~~~~~~~~~-------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVG---LEAKNMIGKTPATIKAI-------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEES---HHHHTTTTCCCTTEEEE--------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEc---HHHHHhcccCCCCeEEE--------
Confidence 468999999999999875333 232 28999999654 3 3799 999887 6666554210
Q ss_pred CCChhhhhcCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHH
Q 008233 102 DTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLT 181 (573)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~ 181 (573)
.|++ +|. +.. ...+++++++++++++.. ..++ ...+|||||++|++.||+
T Consensus 63 -----------~p~~------~g~------i~~---~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~ 112 (344)
T 1jce_A 63 -----------RPMR------DGV------IAD---YTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERR 112 (344)
T ss_dssp -----------CCEE------TTE------ESS---HHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHH
T ss_pred -----------ecCC------CCe------eCC---hHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHH
Confidence 1111 110 111 013566666666555432 1233 478999999999999999
Q ss_pred HHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-c
Q 008233 182 RIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-I 260 (573)
Q Consensus 182 ~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-l 260 (573)
++++|++.||++++.+++||+|||++|+.... .+.++||||+||||||+++++... +.. .++. +
T Consensus 113 ~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~----------~~~~~lVvDiGggttdvsv~~~~~----~~~-~~~~~l 177 (344)
T 1jce_A 113 AILDAGLEAGASKVFLIEEPMAAAIGSNLNVE----------EPSGNMVVDIGGGTTEVAVISLGS----IVT-WESIRI 177 (344)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT----------SSSCEEEEEECSSCEEEEEEETTE----EEE-EEEESC
T ss_pred HHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC----------CCceEEEEEeCCCeEEEEEEEcCC----EEe-eCCCCc
Confidence 99999999999999999999999999875432 367899999999999999998753 222 3455 9
Q ss_pred chHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCce------EEEEEE---ecCCeeEEEEEcHH
Q 008233 261 GGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETS------VQINVD---LGNGLKVSKNVTRE 331 (573)
Q Consensus 261 GG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~------~~i~i~---l~~g~d~~~~itr~ 331 (573)
||++||+.|++++.++++.. +. ...||++|+.|+.... ..+.++ +.+|.+..++|+|+
T Consensus 178 GG~~id~~l~~~l~~~~~~~----~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 244 (344)
T 1jce_A 178 AGDEMDEAIVQYVRETYRVA----IG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGG 244 (344)
T ss_dssp SHHHHHHHHHHHHHHHHCEE----CC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHH
T ss_pred cChhHHHHHHHHHHHHhCcc----cC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHH
Confidence 99999999999998776422 11 4679999999987542 244444 45788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC--cCCC-CeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHh
Q 008233 332 EFEEVNQKVFEKCGSLITQCLHDAKVE--IEDL-NDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEG 408 (573)
Q Consensus 332 ~fe~l~~~~~~~~~~~i~~~l~~~~~~--~~~i-~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a 408 (573)
+|+++++|.++++.+.|.++|++++.. .+.+ +.|+|+||+|++|.|++.|++.| +.++....||+++||+||+++|
T Consensus 245 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a 323 (344)
T 1jce_A 245 EVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVL 323 (344)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHH
Confidence 999999999999999999999987532 1224 68999999999999999999999 5677778899999999999999
Q ss_pred HHhc
Q 008233 409 AVTS 412 (573)
Q Consensus 409 ~~~~ 412 (573)
..++
T Consensus 324 ~~~~ 327 (344)
T 1jce_A 324 DKVN 327 (344)
T ss_dssp GCHH
T ss_pred hChH
Confidence 8554
No 11
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=1e-28 Score=253.90 Aligned_cols=230 Identities=14% Similarity=0.116 Sum_probs=168.8
Q ss_pred eCHHHHHHHHHHHHHHHHHHHcCCCCCeEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CCeeeeechhH
Q 008233 139 TTPEEVLAIFLVELRAMAETQLKRPIRNVV--LTIPVSFSRFQLTRIERACAMA--------G------LHVLRLMPEPT 202 (573)
Q Consensus 139 ~~~~~l~~~~L~~l~~~a~~~~~~~~~~~V--iTVPa~f~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 202 (573)
+..+...++++..|++.++..... ..++| ++||++|+..||+++++++..+ | +..+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~-~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGS-PVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC----CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCC-ceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 444666777777776654222222 35799 9999999999999999998765 4 34588999999
Q ss_pred HHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhhhc
Q 008233 203 AVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSESLF 281 (573)
Q Consensus 203 AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~~~ 281 (573)
|||++|. ..... .....+++|+|+||||||++++++.++. .+...+++. +||++|++.|++++.++++...
T Consensus 174 AAa~~~l-~~~~~------~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~ 245 (346)
T 2fsj_A 174 GAALYLL-NQGII------EQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETGFVV 245 (346)
T ss_dssp HHHHHHH-HHTSS------CCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHhh-ccccc------cccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhCCCc
Confidence 9999883 22111 0124789999999999999999998776 556556666 9999999999988876653200
Q ss_pred CCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEEecCCeeEEEEEcHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcC
Q 008233 282 SSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVDLGNGLKVSKNVTREEF-EEVNQKVFEKCGSLITQCLHDAKVEIE 360 (573)
Q Consensus 282 ~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~l~~g~d~~~~itr~~f-e~l~~~~~~~~~~~i~~~l~~~~~~~~ 360 (573)
++. ...+| ... .+.+ .|. .++++++ +++++++++++.+.+++.|+++ .+
T Consensus 246 --~i~---------~~~~e-------~~~--~~~~---~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~ 295 (346)
T 2fsj_A 246 --PFD---------LAQEA-------LSH--PVMF---RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VD 295 (346)
T ss_dssp --CHH---------HHHHH-------TTS--CEEE---TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GG
T ss_pred --CCC---------HHHHh-------cCC--eEeE---CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hh
Confidence 111 01122 011 1222 343 2559999 9999999999999999999876 45
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhHcCCccc-cCCCCCccceehhHHHHhH
Q 008233 361 DLNDVILVGGCSYIPKVRNLVQSTCKKVEL-YEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 361 ~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i-~~~~~p~~aVA~GAa~~a~ 409 (573)
.++.|+|+||++++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 296 ~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 296 RVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 67899999999998 99999999964332 2267999999999998764
No 12
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=2.1e-27 Score=247.77 Aligned_cols=305 Identities=17% Similarity=0.151 Sum_probs=195.1
Q ss_pred CCeEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeCCceEEcCChHHHhhh-ccCccchhhHhhHhcCCCCC
Q 008233 25 PEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEH-EMLSGAAIFNMKRLIGRVDT 103 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~~~~A~~~-~~~p~~~i~~~k~~lg~~~~ 103 (573)
...++|||+||+++++++..++++.+. ..|...+||... +.. ..++..+...+|+++++.
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~---------------~~g~i~d~~~~~~~ik~~~~~~-- 72 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL---------------MEGMVAEPAALAQEIKELLLEA-- 72 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE---------------ETTEESCHHHHHHHHHHHHHHH--
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc---------------cCCCcCCHHHHHHHHHHHHHHc--
Confidence 457899999999999998876665542 224444554321 111 346777888888888751
Q ss_pred ChhhhhcCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHH----
Q 008233 104 DPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ---- 179 (573)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~q---- 179 (573)
... .+.. .+.. .+...+...+.. ..++++++... ++..++.+++.++.+++|++|. .+.+
T Consensus 73 ~~~---~~~v---~~~i--~~~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~ 136 (377)
T 2ych_A 73 RTR---KRYV---VTAL--SNLAVILRPIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQ 136 (377)
T ss_dssp TCC---CCEE---EEEE--CGGGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSC
T ss_pred CCC---cceE---EEEe--cCCcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCC
Confidence 000 0000 1111 111111100111 23778887654 3446778888889999999972 3332
Q ss_pred ----------------HHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 180 ----------------LTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 180 ----------------r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
.+.+++|++.|||++..++.||+|||++|+...... .+..++|+|+||||||++++
T Consensus 137 ~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~--------~~~~~~vvDiGggttdi~i~ 208 (377)
T 2ych_A 137 EGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEE--------PDRVFLVLDIGAESTSLVLL 208 (377)
T ss_dssp TTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTS--------TTCEEEEEEECSSCEEEEEE
T ss_pred CcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccc--------cCCeEEEEEECCCcEEEEEE
Confidence 388999999999999999999999999987644321 26789999999999999999
Q ss_pred EEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-ecCC
Q 008233 244 ATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-LGNG 321 (573)
Q Consensus 244 ~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l~~g 321 (573)
+. +.+ .. .++. +||++||+.|++.+ +.+ ...||++|+.++.......... ..+-
T Consensus 209 ~~--g~~--~~-~~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~ 264 (377)
T 2ych_A 209 RG--DKP--LA-VRVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDF 264 (377)
T ss_dssp ET--TEE--EE-EEEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC---------------
T ss_pred EC--CEE--EE-EEeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhccccccccccccccccc
Confidence 73 332 22 3445 99999999998722 221 3678999999876432211111 0011
Q ss_pred eeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCcc
Q 008233 322 LKVSKNVTREEFEEVNQKVFEKCGSLITQCLHD--AKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLE 398 (573)
Q Consensus 322 ~d~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~--~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~ 398 (573)
.+....++|++|++++++.++++...|++.|+. ++.....++.|+|+||+|++|.+++.+++.| +.++... ||++
T Consensus 265 ~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~~-~P~~ 341 (377)
T 2ych_A 265 DAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPV-NPWE 341 (377)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEEC-CGGG
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCeEec-Cchh
Confidence 113568999999999999999999999999985 3555668999999999999999999999999 4444332 4443
No 13
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=3.6e-26 Score=227.52 Aligned_cols=201 Identities=21% Similarity=0.234 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCC
Q 008233 143 EVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGS 222 (573)
Q Consensus 143 ~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~ 222 (573)
+....+|+++++.++...+.....+++|+|++|...+|++++++++.+|+++..++.||+|++++|+.
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~------------ 138 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGI------------ 138 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcC------------
Confidence 45577888999999888888889999999999999999999999999999999999999999987652
Q ss_pred CCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHH
Q 008233 223 GSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQD 301 (573)
Q Consensus 223 ~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 301 (573)
...+|+|+||||+|++++. ++.+ .. .... +||.+||+.|.+++.- + ...+|+
T Consensus 139 ---~~~~viDiGggst~~~~~~--~g~~--~~-~~~~~~Gg~~~~~~l~~~l~~--------~-----------~~~ae~ 191 (272)
T 3h1q_A 139 ---NDGIVVDIGGGTTGIAVIE--KGKI--TA-TFDEPTGGTHLSLVLAGSYKI--------P-----------FEEAET 191 (272)
T ss_dssp ---SSEEEEEECSSCEEEEEEE--TTEE--EE-ECCBSCCHHHHHHHHHHHHTC--------C-----------HHHHHH
T ss_pred ---CCEEEEEECCCcEEEEEEE--CCEE--EE-EecCCCcHHHHHHHHHHHhCC--------C-----------HHHHHH
Confidence 1259999999999999987 3332 23 3444 9999999999988741 1 357888
Q ss_pred hhhhcCCCceEEEEEEecCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHH
Q 008233 302 AIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLV 381 (573)
Q Consensus 302 ~K~~LS~~~~~~i~i~l~~g~d~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l 381 (573)
+|+.++ +++++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|.+++.|
T Consensus 192 ~k~~~~---------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l 246 (272)
T 3h1q_A 192 IKKDFS---------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEF 246 (272)
T ss_dssp HHHSST---------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHH
T ss_pred HHHhcC---------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHH
Confidence 898876 6899999999999999999999998764 477999999999999999999
Q ss_pred HhHcCCccccCCCCCccceehhHHHHh
Q 008233 382 QSTCKKVELYEGINPLEAAVSGAALEG 408 (573)
Q Consensus 382 ~~~f~~~~i~~~~~p~~aVA~GAa~~a 408 (573)
++.| +.++..+.+|++++|+|||++|
T Consensus 247 ~~~l-~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 247 SRFL-GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHh-CCCccccCChHHHHHHHHHhcC
Confidence 9999 7788888999999999999875
No 14
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.94 E-value=1.2e-26 Score=245.38 Aligned_cols=225 Identities=14% Similarity=0.096 Sum_probs=162.6
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeeeeechhHHHHHH-HHHhhcccccccCCCCCccEEEEEecCCceeEEE
Q 008233 164 IRNVVLTIPVSFSRFQLTRIERAC-AMAGLHVLRLMPEPTAVALL-YAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVT 241 (573)
Q Consensus 164 ~~~~ViTVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~-y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvs 241 (573)
...++||+|++|+..+|++|.+++ +.+|++.+.+++||+||+++ |...... .. +.+.||+|+||||||++
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~-------~~-~~~glVvDiG~gtt~v~ 178 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG-------ER-TLTGTVIDSGDGVTHVI 178 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCC-------SC-CCCEEEEEESSSCEEEE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccC-------CC-CCeEEEEEcCCCceEEE
Confidence 357999999999999999999999 88999999999999999876 4211100 01 22679999999999999
Q ss_pred EEEEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCc----------
Q 008233 242 VSATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSET---------- 310 (573)
Q Consensus 242 v~~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~---------- 310 (573)
++. +|. .+....+.. +||++||+.|.++|.+++. ......+ ...+|++|+.++...
T Consensus 179 ~v~--~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~ 245 (418)
T 1k8k_A 179 PVA--EGY-VIGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQS-------LETAKAVKERYSYVCPDLVKEFNKY 245 (418)
T ss_dssp EEE--TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGGH-------HHHHHHHHHHHCCCCSCHHHHHHHH
T ss_pred EeE--CCE-EcccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHHH-------HHHHHHHHHhhchhcccHHHHHHhh
Confidence 985 343 223333455 9999999999999987642 1111111 245677777765321
Q ss_pred -------eEEEEEE-ecCCeeEEEEEcHHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--CcCCCCeEEEEcCC
Q 008233 311 -------SVQINVD-LGNGLKVSKNVTREEF---EEVNQKVF------EKCGSLITQCLHDAKV--EIEDLNDVILVGGC 371 (573)
Q Consensus 311 -------~~~i~i~-l~~g~d~~~~itr~~f---e~l~~~~~------~~~~~~i~~~l~~~~~--~~~~i~~V~LvGG~ 371 (573)
...+.++ ...+.+..+++++++| |.+++|.+ ..+.++|.++|.++.. ....++.|+|+||+
T Consensus 246 ~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~ 325 (418)
T 1k8k_A 246 DTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGS 325 (418)
T ss_dssp HHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGG
T ss_pred cccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCc
Confidence 1355665 4445677899999999 55555532 4688888899887643 34456789999999
Q ss_pred cCcHHHHHHHHhHcCC-----------------------ccccCCCCCccceehhHHHHhH
Q 008233 372 SYIPKVRNLVQSTCKK-----------------------VELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 372 s~~p~v~~~l~~~f~~-----------------------~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
|++|.++++|++.+.. .++..+.+|..++.+||+++|.
T Consensus 326 s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 326 TMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp GCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred cccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 9999999998876521 1233456788999999999986
No 15
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.93 E-value=1.8e-24 Score=227.14 Aligned_cols=197 Identities=14% Similarity=0.140 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeec
Q 008233 178 FQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG 257 (573)
Q Consensus 178 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g 257 (573)
...+.+.+|++.|||++..++.||.|||++|...... +..++|+|+||||||+++++ ++.+. .+ +
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~----------~~gv~vvDiGggttdisi~~--~g~~~--~~-~ 232 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEK----------DRGVVVVNLGYNFTGLIAYK--NGVPI--KI-S 232 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHH----------HHCEEEEEECSSSEEEEEEE--TTEEE--EE-E
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccc----------cCCEEEEEECCCcEEEEEEE--CCEEE--EE-E
Confidence 5668899999999999999999999999988544322 56799999999999999987 45433 22 3
Q ss_pred cc-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCC-----CceEEEEEEecCCeeEEEEEcHH
Q 008233 258 SA-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSS-----ETSVQINVDLGNGLKVSKNVTRE 331 (573)
Q Consensus 258 ~~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~-----~~~~~i~i~l~~g~d~~~~itr~ 331 (573)
+. +||++||+.|++.+.- ....||++|+.++. .....+.++..++ ....+++|+
T Consensus 233 ~i~~GG~~it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~-~~~~~is~~ 292 (419)
T 4a2a_A 233 YVPVGMKHVIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG-NTIKTTTAK 292 (419)
T ss_dssp EESCCHHHHHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS-CSEEEEEHH
T ss_pred ecccHHHHHHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecCC-ccceEEcHH
Confidence 45 9999999999875421 14679999998864 2345677772222 357899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC------cCCCCeEEEEcCCcCcHHHHHHHHhHcCCcccc--C-----C-----
Q 008233 332 EFEEVNQKVFEKCGSLITQCLHDAKVE------IEDLNDVILVGGCSYIPKVRNLVQSTCKKVELY--E-----G----- 393 (573)
Q Consensus 332 ~fe~l~~~~~~~~~~~i~~~l~~~~~~------~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~--~-----~----- 393 (573)
+|+++++|.++++.+.+++.|+.++.+ ...++.|+|+||+|++|.|++.+++.| +.++. . +
T Consensus 293 ~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~ 371 (419)
T 4a2a_A 293 KLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIIN 371 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccC
Confidence 999999999999999999999999873 456899999999999999999999999 43332 2 1
Q ss_pred -----CCCccceehhHHHHhHH
Q 008233 394 -----INPLEAAVSGAALEGAV 410 (573)
Q Consensus 394 -----~~p~~aVA~GAa~~a~~ 410 (573)
.+|..+.|.|.++++..
T Consensus 372 ~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 372 ADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp CHHHHTCGGGHHHHHTTCC---
T ss_pred cccccCCchHHHHHHHHHHHhh
Confidence 47899999999998864
No 16
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.93 E-value=2.6e-25 Score=231.47 Aligned_cols=220 Identities=11% Similarity=0.132 Sum_probs=152.8
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 165 RNVVLTIPVSFSRFQLTRIERAC-AMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 165 ~~~ViTVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
..++||+|++++..+|+++.+++ +.+|++.+.+++||+|||++|+. .+.||+|+|+||||++.+
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~---------------~~~lVvDiG~gtt~v~~v 165 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR---------------TTGIVLDSGDGVTHNVPI 165 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC---------------SSEEEEEECSSCEEEEEE
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC---------------CeEEEEEcCCCceEEeEe
Confidence 46999999999999999888765 77899999999999999998752 458999999999998765
Q ss_pred EEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHH---------HHhhhhcCCCceEE
Q 008233 244 ATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVAT---------QDAIHKLSSETSVQ 313 (573)
Q Consensus 244 ~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~---------e~~K~~LS~~~~~~ 313 (573)
.+|. .+....+.. +||+++|+.|.+++..+. +......+.....+|+..+ +..|..++......
T Consensus 166 --~~G~-~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~ 239 (375)
T 2fxu_A 166 --YEGY-ALPHAIMRLDLAGRDLTDYLMKILTERG---YSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 239 (375)
T ss_dssp --ETTE-ECGGGCEEESCCHHHHHHHHHHHHHHHT---CCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEE
T ss_pred --ECCE-EeccceEEeccCHHHHHHHHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeE
Confidence 4453 233333445 999999999999997751 1111111122233333222 11222233333333
Q ss_pred EEEEecCCeeEEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCC--CcCCCCeEEEEcCCcCcHHHHHHHHh
Q 008233 314 INVDLGNGLKVSKNVTREEFE---EVNQKV-----FEKCGSLITQCLHDAKV--EIEDLNDVILVGGCSYIPKVRNLVQS 383 (573)
Q Consensus 314 i~i~l~~g~d~~~~itr~~fe---~l~~~~-----~~~~~~~i~~~l~~~~~--~~~~i~~V~LvGG~s~~p~v~~~l~~ 383 (573)
+. +.+|. .+++++++|+ .+++|. ...+.++|.++|.++.. ...-++.|+|+||+|++|.++++|++
T Consensus 240 ~~--lpdg~--~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~ 315 (375)
T 2fxu_A 240 YE--LPDGQ--VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQK 315 (375)
T ss_dssp EE--CTTSC--EEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHH
T ss_pred EE--CCCCC--EEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHH
Confidence 33 34553 5788998883 344442 24577788888876532 22345789999999999999999998
Q ss_pred HcCC-------ccccCCCCCccceehhHHHHhH
Q 008233 384 TCKK-------VELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 384 ~f~~-------~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
.+.. .++..+.+|..++++||+++|.
T Consensus 316 el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 316 EITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 7731 3455677999999999999997
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.90 E-value=1.7e-23 Score=213.09 Aligned_cols=226 Identities=17% Similarity=0.234 Sum_probs=149.0
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCCeeeeech
Q 008233 138 STTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVS-FSRF--QL--TRIERA------------CAMAGLHVLRLMPE 200 (573)
Q Consensus 138 ~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~ViTVPa~-f~~~--qr--~~l~~A------------a~~AGl~~~~li~E 200 (573)
.+++..+++.+ +.|++ +.. .+.+ ..+|+++|.. |... || +++.+- ++.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 37777777654 44443 211 1222 4699999987 6541 22 222211 23445677899999
Q ss_pred hHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhh
Q 008233 201 PTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSES 279 (573)
Q Consensus 201 p~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~ 279 (573)
|.||+++|..... ++..++|+|+||||+|+++++ ++...+....++. +||.+||+.|++++.++
T Consensus 149 ~~aa~~~~~~~~~----------~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~--- 213 (320)
T 2zgy_A 149 SIPAGYEVLQELD----------ELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA--- 213 (320)
T ss_dssp SHHHHHHHHHHSC----------TTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC---
T ss_pred cHHHHHhhhcccc----------CCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc---
Confidence 9999998874321 267999999999999999998 4555666677887 99999999999988653
Q ss_pred hcCCCCccCHHHHHHHHHHHHHh-hhhcCCCceEEEEEEecCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008233 280 LFSSYGMNEIKSMALLRVATQDA-IHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVE 358 (573)
Q Consensus 280 ~~~~~~~~~~~~~~~L~~~~e~~-K~~LS~~~~~~i~i~l~~g~d~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~ 358 (573)
+.++. . ..+|++ |..- . ..+....+...-+++++.+++++.++++.+.|.+.+++.
T Consensus 214 --~~~i~--~-------~~ae~~lk~~~-~--------~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~--- 270 (320)
T 2zgy_A 214 --RTKGS--S-------YLADDIIIHRK-D--------NNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF--- 270 (320)
T ss_dssp --SBGGG--H-------HHHHHHHHTTT-C--------HHHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred --CCCCC--H-------HHHHHHHHHhh-h--------hhcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 22221 1 123333 3220 0 000000000001345666777777777777777776652
Q ss_pred cCCCCeEEEEcCCcCcHHHHHHHHhHcCCc--cccCCCCCccceehhHHHHh
Q 008233 359 IEDLNDVILVGGCSYIPKVRNLVQSTCKKV--ELYEGINPLEAAVSGAALEG 408 (573)
Q Consensus 359 ~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~--~i~~~~~p~~aVA~GAa~~a 408 (573)
.+++.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||++++
T Consensus 271 -~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 -SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp -CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred -cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 468999999999987 999999999543 57778899999999999876
No 18
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.88 E-value=3e-22 Score=178.93 Aligned_cols=108 Identities=41% Similarity=0.700 Sum_probs=103.3
Q ss_pred EeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCCCCCCC
Q 008233 425 TIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVP 504 (573)
Q Consensus 425 ~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~~~g~~ 504 (573)
+.|++|++||+++.+|.|.+||++|++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.++|++++|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 505 EINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 505 ~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
+|+|+|++|.||+|+|+|.+..+|++..
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~ 109 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNR 109 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEE
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEE
Confidence 9999999999999999999999999865
No 19
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.88 E-value=6.9e-22 Score=176.34 Aligned_cols=108 Identities=41% Similarity=0.717 Sum_probs=103.3
Q ss_pred EeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCCCCCCC
Q 008233 425 TIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVP 504 (573)
Q Consensus 425 ~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~~~g~~ 504 (573)
+.|++|++||+++.+|.|.+||+||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.++|++++|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 505 EINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 505 ~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
+|+|+|++|.||+|+|+|.+..+|++..
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~ 109 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQ 109 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEE
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeE
Confidence 9999999999999999999999998865
No 20
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.88 E-value=4.1e-22 Score=178.35 Aligned_cols=108 Identities=41% Similarity=0.747 Sum_probs=103.9
Q ss_pred EeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCCCCCCC
Q 008233 425 TIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVP 504 (573)
Q Consensus 425 ~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~~~g~~ 504 (573)
+.|++|++||+++.+|.|.+||+||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.++|++++|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 505 EINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 505 ~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
+|+|+|++|.||+|+|+|.+..+|++..
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~ 109 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSES 109 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEE
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeE
Confidence 9999999999999999999999998755
No 21
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=179.57 Aligned_cols=113 Identities=42% Similarity=0.715 Sum_probs=103.3
Q ss_pred CCceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCC
Q 008233 420 NLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPS 499 (573)
Q Consensus 420 ~~~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~ 499 (573)
...+.+.|++|++||+++.+|.+.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.++||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 500 PKGVPEINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 500 ~~g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
++|.++|+|+|++|.||+|+|+|.++.+|++..
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~ 129 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQ 129 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEE
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEee
Confidence 999999999999999999999999999998765
No 22
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.85 E-value=4.8e-21 Score=181.94 Aligned_cols=109 Identities=39% Similarity=0.695 Sum_probs=105.4
Q ss_pred EEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCCCCCC
Q 008233 424 LTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGV 503 (573)
Q Consensus 424 ~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~~~g~ 503 (573)
++.|++|++|||++.+|.|.+|||||++||++++.+|++..|||+.+.|.||||++..+.+|..||+|.+.++||+++|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 504 PEINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 504 ~~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
++|+|+|++|.||+|+|+|.+..+|++..
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~ 110 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQK 110 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEE
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccce
Confidence 99999999999999999999999999765
No 23
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.85 E-value=1.8e-20 Score=168.64 Aligned_cols=108 Identities=43% Similarity=0.738 Sum_probs=103.1
Q ss_pred EeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCCCCCCC
Q 008233 425 TIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVP 504 (573)
Q Consensus 425 ~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~~~g~~ 504 (573)
+.|++|++||+++.++.+.+||++|++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.+.++|+.++|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 505 EINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 505 ~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
+|+|+|++|.||+|+|++.+..+|++..
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~ 109 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNK 109 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEE
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEE
Confidence 9999999999999999999999998654
No 24
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.83 E-value=6.6e-21 Score=166.97 Aligned_cols=113 Identities=37% Similarity=0.641 Sum_probs=103.0
Q ss_pred CCceEEeecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCC
Q 008233 420 NLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPS 499 (573)
Q Consensus 420 ~~~~~~~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~ 499 (573)
.+++.+.|++|++||+++.++.+.+||+||++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.+.++|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 500 PKGVPEINVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 500 ~~g~~~i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
++|.++|+|+|++|.||+|+|+|.+..+|++..
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~ 126 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQK 126 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEE
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEE
Confidence 999999999999999999999999999999765
No 25
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.79 E-value=3.7e-20 Score=193.61 Aligned_cols=215 Identities=15% Similarity=0.192 Sum_probs=88.5
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 165 RNVVLTIPVSFSRFQLTRIERAC-AMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 165 ~~~ViTVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
..+++|+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++. .+.+|+|+|+|||+++.+
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~---------------~~~lVVDiG~g~T~v~pv 169 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL---------------LTGVVVDSGDGVTHICPV 169 (394)
T ss_dssp ----------------------------------------------------------------CCEEEECSSCEEEECE
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC---------------ceEEEEEcCCCceEeeee
Confidence 45999999999999999888865 77899999999999999988763 356999999999999876
Q ss_pred EEeCCeEEEEEeeccc-cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCc------------
Q 008233 244 ATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSET------------ 310 (573)
Q Consensus 244 ~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~------------ 310 (573)
. +|.. +....... +||+++|+.|.++|..+- +......+.. .+|++|+.+....
T Consensus 170 ~--~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~-------~ae~iK~~~~~v~~d~~~~~~~~~~ 236 (394)
T 1k8k_B 170 Y--EGFS-LPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADFE-------TVRMIKEKLCYVGYNIEQEQKLALE 236 (394)
T ss_dssp E--TTEE-CSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTHH-------HHHHHHHHHCCCCSSHHHHHHHHHH
T ss_pred E--CCEE-cccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHHH-------HHHHHHHhheeEecCHHHHHHhhcc
Confidence 4 3432 22122334 999999999999997651 1111111222 3444444432210
Q ss_pred --eEEEEEEecCCeeEEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--cCCCCeEEEEcCCcCcHHHH
Q 008233 311 --SVQINVDLGNGLKVSKNVTREEFE---EVNQKV-----FEKCGSLITQCLHDAKVE--IEDLNDVILVGGCSYIPKVR 378 (573)
Q Consensus 311 --~~~i~i~l~~g~d~~~~itr~~fe---~l~~~~-----~~~~~~~i~~~l~~~~~~--~~~i~~V~LvGG~s~~p~v~ 378 (573)
.....+++.+|. .++|++++|+ .+++|. ...+.++|.+.|.++..+ ..-.+.|+|+||+|.+|.+.
T Consensus 237 ~~~~~~~~~lpdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~ 314 (394)
T 1k8k_B 237 TTVLVESYTLPDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLP 314 (394)
T ss_dssp CSTTCEEEECTTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHH
T ss_pred CCcCceEEECCCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHH
Confidence 001123345554 5677888874 233331 234777888888876432 22346799999999999999
Q ss_pred HHHHhHcCC------------------ccccCCCCCccceehhHHHHhH
Q 008233 379 NLVQSTCKK------------------VELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 379 ~~l~~~f~~------------------~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
++|++.+.. .++..+.+|..++.+||+++|.
T Consensus 315 ~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 315 SRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 998877631 1233356778999999999986
No 26
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.79 E-value=1.9e-18 Score=165.75 Aligned_cols=107 Identities=35% Similarity=0.538 Sum_probs=102.6
Q ss_pred eecccceeEEEecCCeEEEEEcCCCCCCceeEEEEEeecCCCccEEEEEEecCCcccccCceeEEEEEeCCCCCCCCCCE
Q 008233 426 IQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPE 505 (573)
Q Consensus 426 ~~~~~~~igi~~~~~~~~~li~~g~~iP~~~~~~~~~~~d~q~~~~i~i~eg~~~~~~~~~~lg~~~i~~~~~~~~g~~~ 505 (573)
.|++|++|||++.+|.+.+||++|++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.++|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCccEEEEEEEcCCCCCCC
Q 008233 506 INVCMDIDASSVLRVLVGVIMPGNPHP 532 (573)
Q Consensus 506 i~v~~~id~~g~l~v~~~~~~~g~~~~ 532 (573)
|+|+|++|.||+|+|++.+..+|++..
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~ 107 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEAS 107 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEE
T ss_pred EEEEEEECCCCcEEEEeecccccccce
Confidence 999999999999999999999998654
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.78 E-value=2.7e-19 Score=178.13 Aligned_cols=182 Identities=15% Similarity=0.142 Sum_probs=123.6
Q ss_pred HcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchHHHHH
Q 008233 189 MAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQ 267 (573)
Q Consensus 189 ~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~~iD~ 267 (573)
.++...+..|+||+|+++++.... +....|+|+|||+++++++. .++.+++....+.. .|+.+|++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~------------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d 134 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII------------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLD 134 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS------------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC------------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHH
Confidence 366778899999999998876544 33457899999999999885 56778888888888 99999999
Q ss_pred HHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhh--hcCCCceEEEE---EE-ecCCeeEEEEEcHHHHHHHHHHHH
Q 008233 268 NMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIH--KLSSETSVQIN---VD-LGNGLKVSKNVTREEFEEVNQKVF 341 (573)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~--~LS~~~~~~i~---i~-l~~g~d~~~~itr~~fe~l~~~~~ 341 (573)
.+++++.-.+..... + +..++. .++.....-.. +. ..++ ...++++..+.
T Consensus 135 ~~a~~l~~~~~~~~~------------~---~~~a~~~~~i~~~~~~f~~s~~~~~~~~~---------~~~~di~a~~~ 190 (276)
T 4ehu_A 135 VMAKIIEVDVSELGS------------I---SMNSQNEVSISSTCTVFAESEVISHLSEN---------AKIEDIVAGIH 190 (276)
T ss_dssp HHHHHHTCCGGGHHH------------H---HTTCSSCCCCCCCSHHHHHHHHHHHHHTT---------CCHHHHHHHHH
T ss_pred HHHHHhccChhhhHH------------H---HhcCCCCCCcCCccchhhhhHHHHhhhcc---------ccHHHHHHHHH
Confidence 999988654432110 0 000110 00000000000 00 0111 11345566666
Q ss_pred HHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhc
Q 008233 342 EKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTS 412 (573)
Q Consensus 342 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~ 412 (573)
+.+.+.+.....+. ..++.|+|+||.+++|.||+.|++.| +.++..+.+|++++|+|||++|....
T Consensus 191 ~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 191 TSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 55555554444433 35678999999999999999999999 78888999999999999999997543
No 28
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.74 E-value=6.2e-18 Score=173.58 Aligned_cols=209 Identities=13% Similarity=0.145 Sum_probs=138.7
Q ss_pred CeEEEEeCCCCCHHHH-HHHHHHHHHcCC------------CeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEE
Q 008233 165 RNVVLTIPVSFSRFQL-TRIERACAMAGL------------HVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIF 231 (573)
Q Consensus 165 ~~~ViTVPa~f~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~ 231 (573)
..+++.+|..+...+| +++++++..++- ..+.+++||.||++++..+.... .+. -.+..++|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~-~~~---~~~~~~~vv 189 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKV-FKA---FTEGKYSVL 189 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEE-CHH---HHTCEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCcc-ccc---cccCcEEEE
Confidence 4799999998888887 589998875542 45789999999999887543110 000 027899999
Q ss_pred ecCCceeEEEEEEEeCCeEEEEEeeccccchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCce
Q 008233 232 NMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETS 311 (573)
Q Consensus 232 D~GggT~Dvsv~~~~~~~~~v~~~~g~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~ 311 (573)
|+||||||++++ .++.+....+.+..+||..+++++.+++.+++. +.++. . ...++.+.
T Consensus 190 DiGggTtd~~v~--~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~------- 248 (355)
T 3js6_A 190 DFGSGTTIIDTY--QNMKRVEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE------- 248 (355)
T ss_dssp EECSSCEEEEEE--ETTEECGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC-------
T ss_pred EeCCCcEEEEEE--cCCEEccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-------
Confidence 999999999998 344322112233349999999999999987642 11221 1 11111111
Q ss_pred EEEEEEecCCee--EEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHH--HHHHHHhHcCC
Q 008233 312 VQINVDLGNGLK--VSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPK--VRNLVQSTCKK 387 (573)
Q Consensus 312 ~~i~i~l~~g~d--~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~--v~~~l~~~f~~ 387 (573)
+. ..+.+ -.+.++ +.+++.++++++++.+.|++.+.+ ++.++.|+|+||++.++. |++.|++.||.
T Consensus 249 --~~---~~~~~~~k~~di~-~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~ 318 (355)
T 3js6_A 249 --YK---QCKLNQKTVIDFK-DEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEK 318 (355)
T ss_dssp ------------------CH-HHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEEC
T ss_pred --cc---cccccccccccHH-HHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCC
Confidence 00 00100 012222 356777778888888888777754 356789999999999998 88999999844
Q ss_pred ccccCCCCCccceehhHHHHhHHhcC
Q 008233 388 VELYEGINPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 388 ~~i~~~~~p~~aVA~GAa~~a~~~~~ 413 (573)
. .||..|+|+|+..++..+.+
T Consensus 319 ~-----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 319 A-----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp C-----SSGGGHHHHHHHHHHHHHHH
T ss_pred C-----CCcHHHHHHHHHHHHHHHHh
Confidence 2 89999999999999987654
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.60 E-value=2.7e-16 Score=160.07 Aligned_cols=202 Identities=15% Similarity=0.169 Sum_probs=138.1
Q ss_pred CeEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CCeeeeechhHHHHHHHHHhhcccccccCCCCCccEE
Q 008233 165 RNVVLTIPVSFSR--FQLTRIERACAMA--------G------LHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIA 228 (573)
Q Consensus 165 ~~~ViTVPa~f~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~v 228 (573)
..+++++|..+.. .+|+.+++..+.- | +..+.+++||.+|.+.+. .. .++..+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~--------~~~~~v 174 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---EN--------FKNKNV 174 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CC--------CTTCEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hh--------hccCCE
Confidence 4799999976654 3677787776521 1 123678899888876541 11 137899
Q ss_pred EEEecCCceeEEEEEEEeCCeEEEEEeeccc-cchHHHHHHHHHHHHH-hhhhhcCCCCccCHHHHHHHHHHHHHhhhhc
Q 008233 229 VIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNMMRHLMP-NSESLFSSYGMNEIKSMALLRVATQDAIHKL 306 (573)
Q Consensus 229 lV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~-lGG~~iD~~l~~~l~~-~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L 306 (573)
+|+|+||||||+++++ ++.+ +...++.. +||..+++.+.+++.+ ++. ..+.+ ..+|++|+.
T Consensus 175 ~vvDiGggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g----~~i~~---------~~~e~i~~~- 237 (329)
T 4apw_A 175 AVIDFGGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTDLNNG----NLITN---------EQAESALNN- 237 (329)
T ss_dssp EEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCSSC----SCTTS---------BTTTTCSSS-
T ss_pred EEEEeCCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHhhccC----CCCCH---------HHHHHHHhc-
Confidence 9999999999999998 3433 22233444 9999999999988776 443 22221 123444432
Q ss_pred CCCceEEEEEEecCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcC
Q 008233 307 SSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCK 386 (573)
Q Consensus 307 S~~~~~~i~i~l~~g~d~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~ 386 (573)
.. . .. .. +. ..+..+.+++.++++++++.+.+++. +.+++.++.|+|+||++.+ +.+.|++.|+
T Consensus 238 -g~--~--~~--g~--~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~ 301 (329)
T 4apw_A 238 -GY--M--KK--GG--EI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYP 301 (329)
T ss_dssp -CS--S--CE--EC--TT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHST
T ss_pred -CC--c--cc--CC--cc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcC
Confidence 10 0 00 11 11 13456778888888888877777765 3455568999999999997 6799999994
Q ss_pred CccccCCCCCccceehhHHHHhHHh
Q 008233 387 KVELYEGINPLEAAVSGAALEGAVT 411 (573)
Q Consensus 387 ~~~i~~~~~p~~aVA~GAa~~a~~~ 411 (573)
.++....||..|+|+|+..++...
T Consensus 302 -~~v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 302 -NNSIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp -TCEECCSSGGGHHHHHHHHHHHHH
T ss_pred -CCCEecCCChhhHHHHHHHHHhhh
Confidence 456678899999999999988654
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.53 E-value=2.5e-13 Score=143.93 Aligned_cols=178 Identities=15% Similarity=0.067 Sum_probs=115.3
Q ss_pred eEEEEEcCccceEEEEEeCCcEEEEecCCCCccceEEEEEeC----CceEEcCChHHHhhhccCccchhhHhhHhcCCCC
Q 008233 27 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKD----EVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVD 102 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~~~~~~ii~~~~g~~~~PS~v~~~~----~~~~vG~~~~~A~~~~~~p~~~i~~~k~~lg~~~ 102 (573)
..|+||+||.++++++..++.+.. .+||+|+... ...+|| ++|.... +.. +
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG---~e~~~~~--r~~--------l---- 78 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFS---EQSIGIP--RKD--------Y---- 78 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECC---TTGGGSC--CTT--------E----
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEe---cHHHhcC--cCc--------e----
Confidence 568999999999999875443332 3799998843 245788 6532210 000 0
Q ss_pred CChhhhhcCCCCeeEEEeeCCCccEEEEEecCceeeeCHHHHHHHHHHHHHHHHHHHcCCC--CC-eEEEEeCCCCCHHH
Q 008233 103 TDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRP--IR-NVVLTIPVSFSRFQ 179 (573)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~--~~-~~ViTVPa~f~~~q 179 (573)
.-..|++ +|.. .. =+....+++|+... .++.. -. .+++|.|.......
T Consensus 79 -------~l~~Pi~----------------~GvI--~d-wd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~ 129 (498)
T 3qb0_A 79 -------ELKPIIE----------------NGLV--ID-WDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTEN 129 (498)
T ss_dssp -------EEEESEE----------------TTEE--SC-HHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHH
T ss_pred -------EEeccCc----------------CCEE--cc-HHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHH
Confidence 0001111 1211 11 23334455554432 23321 23 69999999999999
Q ss_pred HHHHHHHH-HHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeecc
Q 008233 180 LTRIERAC-AMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGS 258 (573)
Q Consensus 180 r~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~ 258 (573)
|+.|.+.+ +..|++-+.++.+|.||+++++. .+-||+|+|+|+|+++.+. +|..--.+....
T Consensus 130 Re~~~eilFE~f~vpav~l~~~~vlalya~G~---------------~tglVVDiG~g~T~vvPI~--~G~~l~~ai~rl 192 (498)
T 3qb0_A 130 RKKSLEVLLEGMQFEACYLAPTSTCVSFAAGR---------------PNCLVVDIGHDTCSVSPIV--DGMTLSKSTRRN 192 (498)
T ss_dssp HHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTC---------------SSEEEEEECSSCEEEEEEE--TTEECGGGCEEE
T ss_pred HHHHHHHHHhhcCCCeEeecchHHHHHHHcCC---------------CeEEEEEcCCCcEEEEEEe--CCEEccccceec
Confidence 99998875 77999999999999999976642 1249999999999999875 332211112223
Q ss_pred ccchHHHHHHHHHHHHH
Q 008233 259 AIGGEDLLQNMMRHLMP 275 (573)
Q Consensus 259 ~lGG~~iD~~l~~~l~~ 275 (573)
.+||+++|+.|.++|.+
T Consensus 193 ~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 193 FIAGKFINHLIKKALEP 209 (498)
T ss_dssp SCSHHHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHHHHHh
Confidence 39999999999999975
No 31
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.50 E-value=1e-14 Score=153.12 Aligned_cols=223 Identities=12% Similarity=0.071 Sum_probs=139.7
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 165 RNVVLTIPVSFSRFQLTRIERAC-AMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 165 ~~~ViTVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
..+++|.|...+...|+.+.+.+ +..|++.+.++.+|.+|+++.+...... ....+-||+|+|+|+|+++.+
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~-------~~~~tglVVDiG~g~T~v~PV 196 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVT-------DRSLTGTVVDSGDGVTHIIPV 196 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTC-------SCCCCEEEEEESSSCEEEEEE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccccc-------CCCceEEEEECCCCceEEEEE
Confidence 47999999999999999999987 7899999999999999998766432110 013568999999999999988
Q ss_pred EEeCCeEEEEEeeccccchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCc-----------eE
Q 008233 244 ATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSET-----------SV 312 (573)
Q Consensus 244 ~~~~~~~~v~~~~g~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~-----------~~ 312 (573)
. +|..--.+....++||+++|+.|.++|..+... ..+ ...+|++|+.+.... +.
T Consensus 197 ~--~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~~-------~~~~~~IKe~~cyv~~d~~~e~~~~~~~ 261 (427)
T 3dwl_A 197 A--EGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP------DSS-------LKTAERIKEECCYVCPDIVKEFSRFDRE 261 (427)
T ss_dssp E--TTEECGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-
T ss_pred E--CCEEehhhheeccccHHHHHHHHHHHHHHcCCC------chh-------HHHHHHHHHhcCcccCCHHHHHHHhhcC
Confidence 3 232111112223499999999999988765432 000 133444555443210 00
Q ss_pred EEEEE---e--cCCeeEEEEEcHHHHH---HHHHHH------HHHHHHHHHHHHHHcCCC--cCCCCeEEEEcCCcCcHH
Q 008233 313 QINVD---L--GNGLKVSKNVTREEFE---EVNQKV------FEKCGSLITQCLHDAKVE--IEDLNDVILVGGCSYIPK 376 (573)
Q Consensus 313 ~i~i~---l--~~g~d~~~~itr~~fe---~l~~~~------~~~~~~~i~~~l~~~~~~--~~~i~~V~LvGG~s~~p~ 376 (573)
...+. + .+|....++|..++|. -+++|- ...+.++|.+.|.++..+ ..=...|+|+||+|.+|.
T Consensus 262 ~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G 341 (427)
T 3dwl_A 262 PDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKN 341 (427)
T ss_dssp ----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTT
T ss_pred ccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCC
Confidence 00011 2 3455456778888873 344441 234777778888765321 111246999999999999
Q ss_pred HHHHHHhHcC-------------------C--ccccCCCCCccceehhHHHHhH
Q 008233 377 VRNLVQSTCK-------------------K--VELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 377 v~~~l~~~f~-------------------~--~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
+.++|++.+. . .++..+.++..++=+|++++|.
T Consensus 342 ~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 342 FGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp TTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 9988876541 1 2234455677899999999986
No 32
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.14 E-value=3.4e-09 Score=116.55 Aligned_cols=118 Identities=18% Similarity=0.196 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHHH-HHcCCCC-----CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCeeeeechhHHHHHHHHHhhc
Q 008233 141 PEEVLAIFLVELRAMAE-TQLKRPI-----RNVVLTIPVSFSRFQLTRIERAC-AMAGLHVLRLMPEPTAVALLYAQQQQ 213 (573)
Q Consensus 141 ~~~l~~~~L~~l~~~a~-~~~~~~~-----~~~ViTVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~ 213 (573)
..+.... +..|++++- +.++... ..+++|.|..++...|+.|.+.+ +.-|++.+.++.++.||+++++
T Consensus 170 ~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G---- 244 (593)
T 4fo0_A 170 LTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSG---- 244 (593)
T ss_dssp HHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHT----
T ss_pred hhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCC----
Confidence 3344433 345555553 3565443 34999999999999998887775 5679999999999999998764
Q ss_pred ccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccccchHHHHHHHHHHHHHh
Q 008233 214 QSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPN 276 (573)
Q Consensus 214 ~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~lGG~~iD~~l~~~l~~~ 276 (573)
..+-+|||+|.+.|.++-|. +|..--.+....++||+++++.|.++|..+
T Consensus 245 -----------~~tglVVDiG~~~T~v~PV~--dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 245 -----------LSSTCIVDVGDQKTSVCCVE--DGVSHRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp -----------CSEEEEEEECSSCEEEEEEE--SSCBCGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred -----------CCceEEEEeCCCceeeeeeE--CCEEehhheEEecccHHHHHHHHHHHHHhc
Confidence 34678999999999888765 222111111222399999999999988765
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.07 E-value=4.7e-11 Score=123.76 Aligned_cols=195 Identities=19% Similarity=0.229 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHc-CC--CeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEE
Q 008233 178 FQLTRIERACAMA-GL--HVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKA 254 (573)
Q Consensus 178 ~qr~~l~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~ 254 (573)
.+-+.+.+|.+.+ |+ ++-. -||.||+++...+.. ++-.+.++|+||||||++++.-..-. .
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE----------~eLGvaiIDmGGGTTd~sVf~~G~lv----~ 431 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG----------TTRPLAILDLGAGSTDASIINPKGDI----I 431 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT----------CCSSEEEEEECSSEEEEEEECTTCCE----E
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----------CcCCeEEEEeCCCcceEEEEcCCcEE----E
Confidence 4567888899999 99 6666 999999997665543 36789999999999999998855422 2
Q ss_pred eeccccchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCC----------CceEEEEE--E-ec--
Q 008233 255 LSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSS----------ETSVQINV--D-LG-- 319 (573)
Q Consensus 255 ~~g~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~----------~~~~~i~i--~-l~-- 319 (573)
+.....||+.++..|+.-|.-. + +..||++|. .-. .+...+.+ + +.
T Consensus 432 a~~ip~gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~ 492 (610)
T 2d0o_A 432 ATHLAGAGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPA 492 (610)
T ss_dssp EEEEECSHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGG
T ss_pred EEEeccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcc
Confidence 2223399999999888765321 0 245788887 411 12223444 2 11
Q ss_pred --CC-----eeEEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCCCeEEEEcCCcCcHHHHHHHHh
Q 008233 320 --NG-----LKVSKNVTREE--FEEVNQKVFEKCGSL--ITQCLHDAKV-----EIEDLNDVILVGGCSYIPKVRNLVQS 383 (573)
Q Consensus 320 --~g-----~d~~~~itr~~--fe~l~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~s~~p~v~~~l~~ 383 (573)
.- .+.-..| +.+ +|+ ++-+-+++.+. +.++|++.+. +..+|..|+|+||+|.++.+.++.++
T Consensus 493 ~~~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~ 570 (610)
T 2d0o_A 493 VFARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTD 570 (610)
T ss_dssp GTTCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHH
T ss_pred eeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHH
Confidence 11 0112355 666 777 66555555554 3444555332 23467999999999999999999999
Q ss_pred HcCCccc-------cCCCCCccceehhHHHHhH
Q 008233 384 TCKKVEL-------YEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 384 ~f~~~~i-------~~~~~p~~aVA~GAa~~a~ 409 (573)
.|..-++ .....|..|+|.|.++|..
T Consensus 571 iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 571 ALAHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp HTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred HhCcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 9944122 2245899999999998765
No 34
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.05 E-value=6.8e-11 Score=123.06 Aligned_cols=194 Identities=18% Similarity=0.183 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHc-CC--CeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEe
Q 008233 179 QLTRIERACAMA-GL--HVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKAL 255 (573)
Q Consensus 179 qr~~l~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~ 255 (573)
+-+.+.+|.+.+ |+ ++-. -||.||+++...+.. ++-.+.++|+||||||++++.-..-.+ +
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE----------~elGvaiIDmGgGTTd~sVf~~g~lv~----a 434 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG----------CAAPLAILDLGAGSTDAAIVNAEGQIT----A 434 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT----------CCSSEEEEEECSSEEEEEEECSSSCEE----E
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC----------CcCCeEEEEeCCCcceEEEEcCCcEEE----E
Confidence 345678888888 99 6656 999999997665543 367899999999999999998654222 2
Q ss_pred eccccchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCC----------CceEEEEE--E-ec---
Q 008233 256 SGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSS----------ETSVQINV--D-LG--- 319 (573)
Q Consensus 256 ~g~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~----------~~~~~i~i--~-l~--- 319 (573)
.....||+.++..|+.-|.-. + +..||++|. .-. .+...+.+ + +.
T Consensus 435 ~~ip~gG~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~ 495 (607)
T 1nbw_A 435 VHLAGAGNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAV 495 (607)
T ss_dssp EEEECCHHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGG
T ss_pred EEeccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcce
Confidence 223399999999888765321 0 245788887 411 12223444 2 11
Q ss_pred -CC-----eeEEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----cCCCCeEEEEcCCcCcHHHHHHHHhH
Q 008233 320 -NG-----LKVSKNVTREE--FEEVNQKVFEKCGSL--ITQCLHDAKVE-----IEDLNDVILVGGCSYIPKVRNLVQST 384 (573)
Q Consensus 320 -~g-----~d~~~~itr~~--fe~l~~~~~~~~~~~--i~~~l~~~~~~-----~~~i~~V~LvGG~s~~p~v~~~l~~~ 384 (573)
.- .+.-..| +.+ +|+ ++-+-+++.+. +.++|++.+.. ..+|..|+|+||+|.++.+.++.++.
T Consensus 496 ~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~i 573 (607)
T 1nbw_A 496 FAKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEA 573 (607)
T ss_dssp TTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHH
T ss_pred eeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHH
Confidence 11 0112355 666 777 66665565554 45567776553 34679999999999999999999999
Q ss_pred cCCccc-------cCCCCCccceehhHHHHhH
Q 008233 385 CKKVEL-------YEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 385 f~~~~i-------~~~~~p~~aVA~GAa~~a~ 409 (573)
|..-++ .....|..|+|.|.++|..
T Consensus 574 L~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 574 LSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp HHTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred hCcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 943122 2245899999999998753
No 35
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.76 E-value=4.1e-07 Score=89.41 Aligned_cols=72 Identities=18% Similarity=0.201 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHh
Q 008233 335 EVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVT 411 (573)
Q Consensus 335 ~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~ 411 (573)
+++..+++.+...+.+.++..+. .+.|+++||.+++|.+++.+.+.+ +.++..+.+++.+.|+|||++|...
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 33344444444444444443221 367999999999999999999999 7778778888889999999999764
No 36
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.23 E-value=0.0001 Score=72.26 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=53.5
Q ss_pred EcHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcC-CcCcHHHHHHHHhHc--CCccccCCCCCccceehh
Q 008233 328 VTREEFE-EVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGG-CSYIPKVRNLVQSTC--KKVELYEGINPLEAAVSG 403 (573)
Q Consensus 328 itr~~fe-~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG-~s~~p~v~~~l~~~f--~~~~i~~~~~p~~aVA~G 403 (573)
.+++++. .++.-+.+++..+...+.+..+ ++.|+++|| .+..|.+++.+++.+ .+.++..+.+|+.+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 3455544 2333344444444333333333 557999999 899999999999974 467888899999999999
Q ss_pred HHHHh
Q 008233 404 AALEG 408 (573)
Q Consensus 404 Aa~~a 408 (573)
||+++
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 37
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.86 E-value=5e-05 Score=81.54 Aligned_cols=95 Identities=18% Similarity=0.257 Sum_probs=75.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHH-HcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 165 RNVVLTIPVSFSRFQLTRIERACA-MAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 165 ~~~ViTVPa~f~~~qr~~l~~Aa~-~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
..+++|.|..++...|+.|.+.+- ..|++-+.++.+|.||+++++. ..+-||+|+|+|+|+++.+
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl--------------~ttGLVVDiG~g~T~VvPV 287 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI--------------STSTCVVNIGAAETRIACV 287 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC--------------SSCEEEEEECSSCEEEEEE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC--------------CCceEEEcCCCceEEEEEE
Confidence 479999999999999999998874 5899999999999999876532 2457999999999999987
Q ss_pred EEeCCeEEEEEe-eccccchHHHHHHHHHHHHHh
Q 008233 244 ATAGGVSQIKAL-SGSAIGGEDLLQNMMRHLMPN 276 (573)
Q Consensus 244 ~~~~~~~~v~~~-~g~~lGG~~iD~~l~~~l~~~ 276 (573)
. +|. -+... ....+||+++|+.|.++|..+
T Consensus 288 ~--eG~-vl~~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 288 D--EGT-VLEHSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp E--TTE-ECGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred e--CCE-EEhhheeeecchHHHHHHHHHHHHHHc
Confidence 4 332 11111 123399999999999999775
No 38
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.23 E-value=0.0041 Score=62.60 Aligned_cols=47 Identities=17% Similarity=0.065 Sum_probs=41.0
Q ss_pred CCeEEEEcC-CcCcHHHHHHHHhHc-----CCccccCCCCCccceehhHHHHh
Q 008233 362 LNDVILVGG-CSYIPKVRNLVQSTC-----KKVELYEGINPLEAAVSGAALEG 408 (573)
Q Consensus 362 i~~V~LvGG-~s~~p~v~~~l~~~f-----~~~~i~~~~~p~~aVA~GAa~~a 408 (573)
++.|+++|| .+..|.+++.|++.+ ++.++..+.+|..+-|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 447999999 999999999999986 24677788899999999999975
No 39
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=97.11 E-value=0.034 Score=55.32 Aligned_cols=81 Identities=17% Similarity=0.244 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeec
Q 008233 178 FQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG 257 (573)
Q Consensus 178 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g 257 (573)
+...++.++-+..|+++--+=.|-+|...+.+...... ......||+|+|||+|.+++++- + ++.....
T Consensus 90 N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~-------~~~~~~lviDIGGGStEl~~~~~--~--~~~~~~S 158 (315)
T 3mdq_A 90 NKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVP-------MEDHISLAMDIGGGSVEFIIGNK--N--EILWKQS 158 (315)
T ss_dssp THHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSC-------CTTCCEEEEEECSSCEEEEEECS--S--CEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCC-------CCCCCEEEEEeCCCceEEEEEEC--C--eEeeeEE
Confidence 34456666667789998555556666555444443322 12467999999999999999862 2 2334444
Q ss_pred cccchHHHHHHH
Q 008233 258 SAIGGEDLLQNM 269 (573)
Q Consensus 258 ~~lGG~~iD~~l 269 (573)
-++|.-.+.+.+
T Consensus 159 l~lG~vrl~e~f 170 (315)
T 3mdq_A 159 FEIGGQRLIDRF 170 (315)
T ss_dssp ESCCHHHHHHHS
T ss_pred EechhhHHHHHh
Confidence 458887776643
No 40
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.87 E-value=0.0097 Score=59.28 Aligned_cols=80 Identities=19% Similarity=0.192 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeec
Q 008233 178 FQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG 257 (573)
Q Consensus 178 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g 257 (573)
++...+.++-+..|+++-.+-.|.+|...+.+...... .....+|+|+|||+|.+++++ ++. +.....
T Consensus 98 N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~--------~~~~~lvvDIGGGStEl~~~~--~~~--~~~~~S 165 (315)
T 1t6c_A 98 NAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK--------PEGEVCVVDQGGGSTEYVFGK--GYK--VREVIS 165 (315)
T ss_dssp THHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC--------CCSEEEEEEEETTEEEEEEEE--TTE--EEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc--------cCCCEEEEEeCCCcEEEEEEe--CCc--eeeEEE
Confidence 44556666666789998766677777665555443321 146799999999999999975 333 333444
Q ss_pred cccchHHHHHHH
Q 008233 258 SAIGGEDLLQNM 269 (573)
Q Consensus 258 ~~lGG~~iD~~l 269 (573)
-++|+..+.+.+
T Consensus 166 l~~G~v~l~e~~ 177 (315)
T 1t6c_A 166 LPIGIVNLTETF 177 (315)
T ss_dssp ECCCHHHHHHHH
T ss_pred EeccHHHHHHHh
Confidence 459999888765
No 41
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.63 E-value=0.27 Score=48.86 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=30.1
Q ss_pred cCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 190 AGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 190 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
.|++ +.+.|+..|||++-....... ..++++++-+|.| +=.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~--------~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQ--------GHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT--------TCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCC--------CCCCEEEEEeCcc-eEEEEE
Confidence 4776 689999999999765443221 2567888888887 444444
No 42
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.42 E-value=0.87 Score=45.34 Aligned_cols=51 Identities=14% Similarity=0.203 Sum_probs=38.1
Q ss_pred CCeEEEEcCCcCcHHHHHHHHhHcC--CccccCCC---CCccceehhHHHHhHHhc
Q 008233 362 LNDVILVGGCSYIPKVRNLVQSTCK--KVELYEGI---NPLEAAVSGAALEGAVTS 412 (573)
Q Consensus 362 i~~V~LvGG~s~~p~v~~~l~~~f~--~~~i~~~~---~p~~aVA~GAa~~a~~~~ 412 (573)
++.|+|+||.+....+++.|.+.+. +.++..+. --|.++++|+|.+.....
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 5689999999999999999998773 34554443 346788999887655433
No 43
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.07 E-value=0.63 Score=46.10 Aligned_cols=48 Identities=21% Similarity=0.110 Sum_probs=33.3
Q ss_pred CCeEEEEcCCcCc-HHHHHHHHhHcC---------CccccCCCCCccceehhHHHHhH
Q 008233 362 LNDVILVGGCSYI-PKVRNLVQSTCK---------KVELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 362 i~~V~LvGG~s~~-p~v~~~l~~~f~---------~~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
.+.|+|-||.++. +.+.+.|++.+. ..++......+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 4689999998876 666665555441 22445555667899999999874
No 44
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.04 E-value=0.33 Score=48.08 Aligned_cols=50 Identities=24% Similarity=0.143 Sum_probs=33.6
Q ss_pred CCeEEEEcCCcC-cHHHHHHHHhHcCC---------ccccCCCCCccceehhHHHHhHHh
Q 008233 362 LNDVILVGGCSY-IPKVRNLVQSTCKK---------VELYEGINPLEAAVSGAALEGAVT 411 (573)
Q Consensus 362 i~~V~LvGG~s~-~p~v~~~l~~~f~~---------~~i~~~~~p~~aVA~GAa~~a~~~ 411 (573)
.+.|+|.||.+. .+.+.+.+++.+.. .++......+.+.++|||.++...
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~~ 322 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQF 322 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHHh
Confidence 457999999886 57777777665521 223334445678999999987643
No 45
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.01 E-value=0.0098 Score=63.16 Aligned_cols=80 Identities=16% Similarity=0.106 Sum_probs=55.5
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++ .|++.+ ..++.|.++||.++++.+.+.+.+.+ +.++.....++.+.|+|||+.
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~-~l~~~g---~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMD-VVHACG---IKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTT---CCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcC---CCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHH
Confidence 4555533 33444444433333 233333 34678999999999999999999999 788877655555689999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 432 A~~~~g 437 (484)
T 2itm_A 432 AQIAAN 437 (484)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 986555
No 46
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.94 E-value=0.014 Score=63.03 Aligned_cols=82 Identities=15% Similarity=0.184 Sum_probs=57.9
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehh
Q 008233 327 NVTREEFEEVNQKVFEKCGSLITQC---LHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSG 403 (573)
Q Consensus 327 ~itr~~fe~l~~~~~~~~~~~i~~~---l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~G 403 (573)
.-+|.++-.++.-+++-+.-.+..+ |++.+ ..++.|.++||.++++++.+.+.+.| +.++..+ ...++.|+|
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g---~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alG 482 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNG---YNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLG 482 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---CCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHH
Confidence 3478887433333444333333333 33433 35789999999999999999999999 7777654 456799999
Q ss_pred HHHHhHHhcC
Q 008233 404 AALEGAVTSG 413 (573)
Q Consensus 404 Aa~~a~~~~~ 413 (573)
||+.|+.-.+
T Consensus 483 AA~lA~~a~G 492 (554)
T 3l0q_A 483 SAMMGTVAAG 492 (554)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999987655
No 47
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=95.89 E-value=0.46 Score=47.48 Aligned_cols=69 Identities=14% Similarity=0.213 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcC--CccccCCC---CCccceehhHHHHhHHhcC
Q 008233 340 VFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCK--KVELYEGI---NPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 340 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~--~~~i~~~~---~p~~aVA~GAa~~a~~~~~ 413 (573)
+.+.+.+.+.++++..+ ++.|+|+||.+...++++.|.+.+. +.++..+. --|-++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44445555555555544 4689999999999999999998873 33454432 3578899999876655444
No 48
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.86 E-value=0.014 Score=62.24 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=54.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHh
Q 008233 329 TREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEG 408 (573)
Q Consensus 329 tr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a 408 (573)
+|.++- .-+++.+.-.+..+++...... .++.|.++||.++++++.+.+.+.+ +.++..+ .+.++.|+|||+.|
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHH
Confidence 454443 3333344344444444332222 5789999999999999999999999 7777654 34569999999999
Q ss_pred HHhcC
Q 008233 409 AVTSG 413 (573)
Q Consensus 409 ~~~~~ 413 (573)
+.-.+
T Consensus 439 ~~~~g 443 (497)
T 2zf5_O 439 GLAVD 443 (497)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 86555
No 49
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.78 E-value=0.018 Score=61.85 Aligned_cols=78 Identities=10% Similarity=0.073 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcC
Q 008233 334 EEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 334 e~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~ 413 (573)
..++.-+++.+.-.+..+++..+.....++.|.++||.++++++.+.+.+.| +.++... .+.|+.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 3344444444444445555554444446789999999999999999999999 7777654 4578999999999976443
No 50
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.60 E-value=0.02 Score=61.16 Aligned_cols=50 Identities=18% Similarity=0.159 Sum_probs=44.1
Q ss_pred CCeEEEEcCCcCcHHHHHHHHhHcCCccc-cCCCCCccceehhHHHHhHHhcC
Q 008233 362 LNDVILVGGCSYIPKVRNLVQSTCKKVEL-YEGINPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 362 i~~V~LvGG~s~~p~v~~~l~~~f~~~~i-~~~~~p~~aVA~GAa~~a~~~~~ 413 (573)
++.|.++||.++++++.+.+.+.+ +.++ .. ..+.|+.|+|||+.|+.-.+
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHHHHHHHhC
Confidence 789999999999999999999999 7787 54 35889999999999987655
No 51
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.47 E-value=2.1 Score=42.44 Aligned_cols=47 Identities=21% Similarity=0.183 Sum_probs=32.6
Q ss_pred CCeEEEEcCCcCcHHHHHHHHhHcCC--------ccccCCCCCccceehhHHHHh
Q 008233 362 LNDVILVGGCSYIPKVRNLVQSTCKK--------VELYEGINPLEAAVSGAALEG 408 (573)
Q Consensus 362 i~~V~LvGG~s~~p~v~~~l~~~f~~--------~~i~~~~~p~~aVA~GAa~~a 408 (573)
.+.|+|-||.+..+.+.+.|++.+.. .++....-.+.+.++|||.++
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 45899999998888777777776622 122223334678899999875
No 52
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.44 E-value=0.025 Score=60.27 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=55.4
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++++++.+.+.+.+ +.++... .+.|+.|+|||+.
T Consensus 364 ~~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 437 (504)
T 3ll3_A 364 QKPEMARAVIEGIIFNLYDAAS-NLIKNTK---KPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFL 437 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHH
Confidence 5555543 33333333333333 3344332 5789999999999999999999999 7777654 4567999999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 438 A~~a~G 443 (504)
T 3ll3_A 438 ARQALG 443 (504)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987655
No 53
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.42 E-value=0.018 Score=61.47 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=55.7
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++++++.+.+.+.+ +.++... .+.++.|+|||+.
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~l 468 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQ 468 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHH
Confidence 5665543 33444444444443 3444443 4679999999999999999999999 7777654 4567899999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 469 A~~a~G 474 (515)
T 3i8b_A 469 AAWVLS 474 (515)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 986544
No 54
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.23 E-value=2.7 Score=41.73 Aligned_cols=45 Identities=7% Similarity=-0.034 Sum_probs=33.8
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHc-C--CCeeeeechhHHHHHH
Q 008233 163 PIRNVVLTIPVSFSRFQLTRIERACAMA-G--LHVLRLMPEPTAVALL 207 (573)
Q Consensus 163 ~~~~~ViTVPa~f~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~AAal~ 207 (573)
++..+.|++|...+......+++..+.. | .-.+.+.|+..|||++
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 5788999999998877666666665543 4 1346899999999987
No 55
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.10 E-value=0.027 Score=59.95 Aligned_cols=81 Identities=14% Similarity=0.204 Sum_probs=57.0
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++..-+..+. .++.|.++||.++++++.+.+.+.+ +.++... .+.|+.|+|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHH
Confidence 4555543 3344444444444433333443 4679999999999999999999999 7777554 4678999999999
Q ss_pred hHHhcCC
Q 008233 408 GAVTSGI 414 (573)
Q Consensus 408 a~~~~~~ 414 (573)
|+.-.+.
T Consensus 449 a~~a~G~ 455 (501)
T 3g25_A 449 AGLAVGF 455 (501)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9876653
No 56
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.07 E-value=0.039 Score=58.65 Aligned_cols=80 Identities=19% Similarity=0.150 Sum_probs=55.5
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFE-EVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe-~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++- .+++-+.-.+...++..-+..+. .++.|.++||.++++++.+.+.+.+ +.++... .+.++.|+|||+.
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALM 442 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHH
Confidence 455543 34444444444444433222333 4678999999999999999999999 7777654 4566999999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 976544
No 57
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.03 E-value=2.9 Score=40.88 Aligned_cols=49 Identities=22% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCeEEEEcCCc-Cc-HHHHHHHHhHcCC-------ccccCCCCCccceehhHHHHhHH
Q 008233 362 LNDVILVGGCS-YI-PKVRNLVQSTCKK-------VELYEGINPLEAAVSGAALEGAV 410 (573)
Q Consensus 362 i~~V~LvGG~s-~~-p~v~~~l~~~f~~-------~~i~~~~~p~~aVA~GAa~~a~~ 410 (573)
.+.|+|-||.+ .. +.+.+.|++.+.. ..+....-.+.+.++|||.++..
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 295 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAYL 295 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHHH
Confidence 45888888877 54 6666666555411 12333444567899999998853
No 58
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.01 E-value=0.11 Score=55.17 Aligned_cols=77 Identities=10% Similarity=0.207 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcCCCeeeeechhHHHHHHH-HHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeecc
Q 008233 180 LTRIERACAMAGLHVLRLMPEPTAVALLY-AQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGS 258 (573)
Q Consensus 180 r~~l~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~ 258 (573)
..++.++-+..|+++ .+|+-.+=|.+.| +...... ..+..+|+|+|||+|.+++.+ ++. +.....-
T Consensus 99 ~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~--------~~~~~lviDIGGGStEl~~~~--~~~--~~~~~Sl 165 (513)
T 1u6z_A 99 TDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQP--------EKGRKLVIDIGGGSTELVIGE--NFE--PILVESR 165 (513)
T ss_dssp HHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSC--------CCSCEEEEEECSSCEEEEEEE--TTE--EEEEEEE
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhcc--------CCCCEEEEEECCCcEEEEEEe--CCe--eeEEEEE
Confidence 355566656679988 4555554444444 4433321 123699999999999999874 333 2333444
Q ss_pred ccchHHHHHHH
Q 008233 259 AIGGEDLLQNM 269 (573)
Q Consensus 259 ~lGG~~iD~~l 269 (573)
++|...+.+.+
T Consensus 166 ~lG~vrlte~f 176 (513)
T 1u6z_A 166 RMGCVSFAQLY 176 (513)
T ss_dssp SCCHHHHHHHH
T ss_pred eccHHHHHHHH
Confidence 59988887765
No 59
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.99 E-value=0.046 Score=58.59 Aligned_cols=82 Identities=12% Similarity=0.127 Sum_probs=58.2
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHH
Q 008233 328 VTREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAAL 406 (573)
Q Consensus 328 itr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~ 406 (573)
-+|.++-. +++-+.-.+...++..-+..+. .++.|.++||.++++++.+.+.+.+ +.+|..+ ...|+.|+|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHH
Confidence 35555543 3344444444444444344554 4679999999999999999999999 7887654 456789999999
Q ss_pred HhHHhcCC
Q 008233 407 EGAVTSGI 414 (573)
Q Consensus 407 ~a~~~~~~ 414 (573)
.|+.-.+.
T Consensus 446 lA~~a~G~ 453 (526)
T 3ezw_A 446 LAGLAVGF 453 (526)
T ss_dssp HHHHHTTS
T ss_pred HHHHHhCC
Confidence 99876663
No 60
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.98 E-value=0.024 Score=60.51 Aligned_cols=79 Identities=15% Similarity=0.066 Sum_probs=55.9
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++++++.+.+.+.+ +.++..... .|+.|+|||+.
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~l 444 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWV 444 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHH
Confidence 5666543 33444444444443 3444443 4679999999999999999999999 777766543 56889999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 445 A~~a~G 450 (508)
T 3ifr_A 445 AAIGGG 450 (508)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 987655
No 61
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.92 E-value=0.025 Score=60.44 Aligned_cols=80 Identities=11% Similarity=0.112 Sum_probs=56.1
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++..-+..+. .++.|.++||.++++++.+.+.+.+ +.++... .+.|+.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHH
Confidence 5555543 3344444444444433222343 4678999999999999999999999 7777654 4677999999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 446 A~~a~G 451 (510)
T 2p3r_A 446 AGLAVG 451 (510)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 987655
No 62
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.83 E-value=0.026 Score=61.11 Aligned_cols=79 Identities=15% Similarity=0.220 Sum_probs=55.3
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc-CcHHHHHHHHhHcCCccccCCCCCccceehhHHH
Q 008233 329 TREEFEEV-NQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCS-YIPKVRNLVQSTCKKVELYEGINPLEAAVSGAAL 406 (573)
Q Consensus 329 tr~~fe~l-~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~ 406 (573)
+|.+|-.. ++-+.-.+...++ .|++.+. .++.|.++||.+ +++++.+.+.+.| +.+|... .+.|+.|+|||+
T Consensus 410 t~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~ 483 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIVD-AFHGRGV---EVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAM 483 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHH
Confidence 56665432 3333333333333 3344443 467999999999 9999999999999 7777544 457899999999
Q ss_pred HhHHhcC
Q 008233 407 EGAVTSG 413 (573)
Q Consensus 407 ~a~~~~~ 413 (573)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987555
No 63
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.79 E-value=0.035 Score=59.18 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=56.7
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++..-+..+. .++.|.++||.++++++.+.+.+.+ +.++... .+.|+.|+|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHH
Confidence 5665543 3344444444444433222343 4679999999999999999999999 7777554 4678999999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 448 A~~a~G 453 (506)
T 3h3n_X 448 AGLAVG 453 (506)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987655
No 64
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.74 E-value=0.025 Score=60.58 Aligned_cols=81 Identities=15% Similarity=0.088 Sum_probs=53.7
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCC-CcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKV-EIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAAL 406 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~-~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~ 406 (573)
+|.++-. +++-+.-.+...++. |++.+. .. .++.|.++||.++++++.+.+.+.+ +.++..+ .+.|+.|+|||+
T Consensus 393 ~~~~l~RAvlEgia~~~r~~l~~-l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~ 468 (520)
T 4e1j_A 393 GPAEFARAALEAVCYQTRDLLEA-MHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAW 468 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-HHHHCC------CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCC-CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHH
Confidence 5655543 334444444444433 333200 11 4678999999999999999999999 7777654 457799999999
Q ss_pred HhHHhcC
Q 008233 407 EGAVTSG 413 (573)
Q Consensus 407 ~a~~~~~ 413 (573)
+|+.-.+
T Consensus 469 lA~~a~G 475 (520)
T 4e1j_A 469 LAGSRAG 475 (520)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9987665
No 65
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=94.49 E-value=2.5 Score=45.15 Aligned_cols=184 Identities=12% Similarity=0.120 Sum_probs=93.3
Q ss_pred CCCeEEEEe-CCCCCHHHHHHH--HHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeE
Q 008233 163 PIRNVVLTI-PVSFSRFQLTRI--ERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCD 239 (573)
Q Consensus 163 ~~~~~ViTV-Pa~f~~~qr~~l--~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~D 239 (573)
++..+++|. |..|+....-.. +.-|...|++++. |+.-.|=+++........ .+ +++-+-||++.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~--------~p---~~l~vsGg~t~ 139 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAE--------DP---LTLYVSGGNTQ 139 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCS--------SC---EEEEECSSCEE
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCC--------CC---cEEEEcCCCcE
Confidence 567777777 776665422111 2223445776655 455455443333332221 13 55556677776
Q ss_pred EEEEEEeCCeEEEEEeeccccchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHHhhhhcCCCceEEEEEE-e
Q 008233 240 VTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQDAIHKLSSETSVQINVD-L 318 (573)
Q Consensus 240 vsv~~~~~~~~~v~~~~g~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~LS~~~~~~i~i~-l 318 (573)
+- .+.++.+++++..-+.--|+.||.. +..| +.....-+ . |...|.+.+.. +.++ .
T Consensus 140 ~~--~~~~~~~~~lg~t~d~s~G~~~D~~-a~~l--------gl~~~gg~-~---ie~lA~~g~~~--------~~~p~~ 196 (540)
T 3en9_A 140 VI--AYVSKKYRVFGETLDIAVGNCLDQF-ARYV--------NLPHPGGP-Y---IEELARKGKKL--------VDLPYT 196 (540)
T ss_dssp EE--EEETTEEEEEEEBSSSCHHHHHHHH-HHHT--------TCCSSCHH-H---HHHHHHTCCCC--------CCCCCC
T ss_pred EE--EEeCCceEEEeeccchHhHHHHHHH-HHHc--------CCCCCCHH-H---HHHHHHcCCcc--------CcCCCC
Confidence 54 4446889999887777667888842 3222 22221112 2 22223222110 1111 0
Q ss_pred cCCeeEEEE-------------EcHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhH
Q 008233 319 GNGLKVSKN-------------VTREEFEEVN-QKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQST 384 (573)
Q Consensus 319 ~~g~d~~~~-------------itr~~fe~l~-~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~ 384 (573)
..+.++++. .+..++..-+ +-+++-+.+.+.++++..+ ++.|+|+||.+....+++.|.+.
T Consensus 197 ~~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~ 271 (540)
T 3en9_A 197 VKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAM 271 (540)
T ss_dssp EETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHH
T ss_pred CCCcceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHH
Confidence 112222110 0112222111 1234444455555655554 46899999999999999999997
Q ss_pred cC
Q 008233 385 CK 386 (573)
Q Consensus 385 f~ 386 (573)
..
T Consensus 272 ~~ 273 (540)
T 3en9_A 272 CE 273 (540)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 66
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.32 E-value=0.085 Score=56.16 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=57.3
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+|.++-. +++-+.-.+...++..-+..+. .++.|.++||.++++++.+.+.+.+ +.++... .+.++.|+|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHH
Confidence 5555543 4445555555555543333443 3678999999999999999999999 7777654 4567999999999
Q ss_pred hHHhcC
Q 008233 408 GAVTSG 413 (573)
Q Consensus 408 a~~~~~ 413 (573)
|+.-.+
T Consensus 448 A~~~~G 453 (504)
T 2d4w_A 448 AGIAVG 453 (504)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 986555
No 67
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.16 E-value=0.089 Score=55.97 Aligned_cols=80 Identities=10% Similarity=0.100 Sum_probs=56.2
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCC-CeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHH
Q 008233 329 TREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDL-NDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAAL 406 (573)
Q Consensus 329 tr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i-~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~ 406 (573)
+|.++-. +++-+.-.+...++..-+..+. .+ +.|.++||.++++.+.+.+.+.+ +.++... .+.++.|+|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHH
Confidence 4555543 4445555555555443333343 35 68999999999999999999999 7777654 456699999999
Q ss_pred HhHHhcC
Q 008233 407 EGAVTSG 413 (573)
Q Consensus 407 ~a~~~~~ 413 (573)
.|+.-.+
T Consensus 451 la~~~~G 457 (503)
T 2w40_A 451 LAGLEVK 457 (503)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9986555
No 68
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=94.10 E-value=2.5 Score=43.18 Aligned_cols=50 Identities=10% Similarity=0.110 Sum_probs=32.0
Q ss_pred CCeEEEEcCCcC-cHHHHHHHHhHcC---------CccccCCCCCccceehhHHHHhHHh
Q 008233 362 LNDVILVGGCSY-IPKVRNLVQSTCK---------KVELYEGINPLEAAVSGAALEGAVT 411 (573)
Q Consensus 362 i~~V~LvGG~s~-~p~v~~~l~~~f~---------~~~i~~~~~p~~aVA~GAa~~a~~~ 411 (573)
.+.|+|.||.+. .+.+.+.+++.+. ..++......+.+.++|||+....+
T Consensus 335 P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~~ 394 (406)
T 1z6r_A 335 PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDAM 394 (406)
T ss_dssp CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHHT
T ss_pred CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHHH
Confidence 457898898876 3666666655441 1234444456678999998776543
No 69
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.95 E-value=0.06 Score=57.09 Aligned_cols=78 Identities=14% Similarity=0.206 Sum_probs=53.4
Q ss_pred EEcHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHH
Q 008233 327 NVTREEFEE-VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAA 405 (573)
Q Consensus 327 ~itr~~fe~-l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa 405 (573)
.-+|.++-. +++-+.-.+...++..-+..+. .++.|.++||.++++++.+.+.+.+ +.++.... .++.|.|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHH
Confidence 346666553 3444444444444433222343 4678999999999999999999999 77776443 689999997
Q ss_pred HHhHH
Q 008233 406 LEGAV 410 (573)
Q Consensus 406 ~~a~~ 410 (573)
+.|..
T Consensus 435 ~~A~~ 439 (489)
T 2uyt_A 435 GIQLM 439 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 70
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=92.93 E-value=5.6 Score=40.91 Aligned_cols=44 Identities=16% Similarity=0.168 Sum_probs=29.2
Q ss_pred cCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 190 AGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 190 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
.|++ +.+.|+..|||++-....... ..++++++-+|.| +=.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~--------~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQ--------DVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT--------TCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCC--------CCCcEEEEEECCc-EEEEEE
Confidence 4776 589999999999765443221 2467888888877 334444
No 71
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=92.92 E-value=4.5 Score=39.84 Aligned_cols=44 Identities=16% Similarity=0.159 Sum_probs=28.5
Q ss_pred cCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 190 AGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 190 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
.|++ +.+.|+..|||++-....... ..++++++-+|-| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~--------~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFT--------QYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGG--------GCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCC--------CCCcEEEEEECCc-EEEEEE
Confidence 4666 689999999998754332211 1567888888877 334433
No 72
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=92.62 E-value=0.21 Score=50.17 Aligned_cols=86 Identities=9% Similarity=0.179 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeE--EEEEee
Q 008233 179 QLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVS--QIKALS 256 (573)
Q Consensus 179 qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~--~v~~~~ 256 (573)
...++.++-+..|+++ .+|+-.+=|.+.|.--..... . .......+|+|+|||+|+++++.-..+.. ++....
T Consensus 104 ~~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~--~--~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~ 178 (343)
T 3cer_A 104 REEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVN--R--DDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAF 178 (343)
T ss_dssp HHHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCC--T--TTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEE
T ss_pred HHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCc--c--ccccCCEEEEEeCCCceEEEEeecCccCcccccceeE
Confidence 3456666667789987 555555555554543322211 0 00235699999999999999976411110 112233
Q ss_pred ccccchHHHHHHH
Q 008233 257 GSAIGGEDLLQNM 269 (573)
Q Consensus 257 g~~lGG~~iD~~l 269 (573)
.-++|+..+.+.+
T Consensus 179 SlplG~v~lt~~~ 191 (343)
T 3cer_A 179 SMNIGSVRMTERH 191 (343)
T ss_dssp EESCCHHHHHHHT
T ss_pred EEehhHHHHHHHh
Confidence 4449999888765
No 73
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=92.45 E-value=1.6 Score=41.54 Aligned_cols=22 Identities=9% Similarity=0.308 Sum_probs=18.5
Q ss_pred CeEEEEEcCccceEEEEEeCCc
Q 008233 26 EIAIGIDIGTSQCSIAFWNGSE 47 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~~~ 47 (573)
+..++||.|+|++++|++++++
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSSS
T ss_pred ceEEEEEECCCeEEEEEEECCE
Confidence 3589999999999999986553
No 74
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.40 E-value=0.29 Score=51.59 Aligned_cols=70 Identities=9% Similarity=-0.025 Sum_probs=49.7
Q ss_pred HHHHHHHHH--HHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhH-cCCccccCCCCCccceehhHHHHhHH
Q 008233 335 EVNQKVFEK--CGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQST-CKKVELYEGINPLEAAVSGAALEGAV 410 (573)
Q Consensus 335 ~l~~~~~~~--~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~-f~~~~i~~~~~p~~aVA~GAa~~a~~ 410 (573)
.+..-+++. +.-.+..+++.... .+.|.++||.+++|++.+.+.+. | +.++..+. ..|+.|+|||++|+.
T Consensus 363 ~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 363 WFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 344444442 33334445554331 26899999999999999999999 9 77776654 456889999999974
No 75
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=90.48 E-value=1 Score=47.70 Aligned_cols=78 Identities=17% Similarity=0.081 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEEeCCeEEEEEeec
Q 008233 178 FQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG 257 (573)
Q Consensus 178 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g 257 (573)
+...++.++-+..|+++--+=.|-+|...+.+...... ....||+|+|||+|.+++++ ++ ++.....
T Consensus 101 N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~---------~~~~lvvDIGGGStEl~~~~--~~--~~~~~~S 167 (508)
T 3hi0_A 101 NGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFY---------QPDGIAGDLGGGSLELIDIK--DK--SCGEGIT 167 (508)
T ss_dssp THHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSS---------SCEEEEEEECSSCEEEEEEE--TT--EECCCEE
T ss_pred CHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCC---------CCCeEEEEeCCCceEEEEee--CC--eeeeEEE
Confidence 34456677777789998444444455444444433322 23459999999999999986 33 2333334
Q ss_pred cccchHHHHHH
Q 008233 258 SAIGGEDLLQN 268 (573)
Q Consensus 258 ~~lGG~~iD~~ 268 (573)
-++|.-.+.+.
T Consensus 168 l~lG~vrl~e~ 178 (508)
T 3hi0_A 168 LPLGGLRLSEQ 178 (508)
T ss_dssp ESCCHHHHHHH
T ss_pred ecceEEehhhc
Confidence 44888777753
No 76
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=87.03 E-value=8.4 Score=40.24 Aligned_cols=58 Identities=7% Similarity=0.094 Sum_probs=42.1
Q ss_pred CHHHHHHHHHHHHHcCCCe--eeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEEE
Q 008233 176 SRFQLTRIERACAMAGLHV--LRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSAT 245 (573)
Q Consensus 176 ~~~qr~~l~~Aa~~AGl~~--~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~ 245 (573)
...-.+.+++|.+.-|+++ +.++|..+|++++..+.. .++++-+=+|-|+=-+-+.+.
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~------------~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD------------PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC------------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC------------CCcEEEEEEecCcceEEEeec
Confidence 3567788999998889874 789999999999877652 355666667777554444443
No 77
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=86.04 E-value=2.4 Score=42.55 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccC----CCCCccceehhHHHHhHHh
Q 008233 340 VFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYE----GINPLEAAVSGAALEGAVT 411 (573)
Q Consensus 340 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~----~~~p~~aVA~GAa~~a~~~ 411 (573)
+.+-+...|.+.++... ..++.|+++||+++.|+|.++|++.+++.++.. .++++..=|..-|++|...
T Consensus 265 Lt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~ 337 (371)
T 3qbx_A 265 LLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRF 337 (371)
T ss_dssp HHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHH
Confidence 33344444555554432 135789999999999999999999997655532 3456665566677777654
No 78
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=83.41 E-value=9.6 Score=39.53 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHcCCC--eeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEE
Q 008233 178 FQLTRIERACAMAGLH--VLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSA 244 (573)
Q Consensus 178 ~qr~~l~~Aa~~AGl~--~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 244 (573)
.-++.+.++.+..|++ ++.++|...|++++-.+.. .++++.+=+|-|+==.-+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~------------~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD------------AXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC------------TTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC------------CccEEEEEECcEEEEEEEEC
Confidence 5677888888766775 4899999999999877722 45666666777754444443
No 79
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=82.15 E-value=3.4 Score=41.42 Aligned_cols=73 Identities=11% Similarity=0.146 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccC----CCCCccceehhHHHHhHH
Q 008233 335 EVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYE----GINPLEAAVSGAALEGAV 410 (573)
Q Consensus 335 ~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~----~~~p~~aVA~GAa~~a~~ 410 (573)
++..-+.+-+...|.+.++... ..+.|+++||+++.|+|.++|++.+++.++.. .++|+..=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 3334444445555556665432 35589999999999999999999997655422 345665555555777755
Q ss_pred h
Q 008233 411 T 411 (573)
Q Consensus 411 ~ 411 (573)
.
T Consensus 343 ~ 343 (370)
T 3cqy_A 343 Y 343 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 80
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=79.23 E-value=3.5 Score=40.05 Aligned_cols=49 Identities=16% Similarity=0.104 Sum_probs=37.9
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHH
Q 008233 361 DLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAV 410 (573)
Q Consensus 361 ~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ 410 (573)
+.+.|+|.||.+..+.+.+.|++.++..++.... .+.+.+.||+.++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 3458999999887788888888888544555555 668899999998864
No 81
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=77.45 E-value=7 Score=42.40 Aligned_cols=50 Identities=12% Similarity=0.045 Sum_probs=39.3
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhHcCCccccC---CCCCccceehhHHHHhHH
Q 008233 361 DLNDVILVGGCSYIPKVRNLVQSTCKKVELYE---GINPLEAAVSGAALEGAV 410 (573)
Q Consensus 361 ~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~---~~~p~~aVA~GAa~~a~~ 410 (573)
.++.|+|+||.+...+|++.|.+.+.+.++.. ..--|-++|.|.|++|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 35699999999999999999999884444433 223478999999998854
No 82
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=76.99 E-value=5.7 Score=44.12 Aligned_cols=62 Identities=13% Similarity=0.236 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCC--ccccCCC---CCccceehhHHHHhHHh
Q 008233 345 GSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKK--VELYEGI---NPLEAAVSGAALEGAVT 411 (573)
Q Consensus 345 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~--~~i~~~~---~p~~aVA~GAa~~a~~~ 411 (573)
.+.+.++.++. .++.|+|.||.+....+++.|.+.+.. .++..+. --|..+|.|+|++|+..
T Consensus 694 ~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 694 AHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 34444444443 366899999999999999999998843 3344332 23788999999888654
No 83
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=76.36 E-value=3.9 Score=45.32 Aligned_cols=53 Identities=17% Similarity=0.118 Sum_probs=40.1
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhHcC--CccccCC---CCCccceehhHHHHhHHhcC
Q 008233 361 DLNDVILVGGCSYIPKVRNLVQSTCK--KVELYEG---INPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 361 ~i~~V~LvGG~s~~p~v~~~l~~~f~--~~~i~~~---~~p~~aVA~GAa~~a~~~~~ 413 (573)
.++.|+|+||.+...+|++.|.+.+. +.++..+ .--|-++|+|+|++|.....
T Consensus 693 g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 693 GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 35689999999999999999998872 3344332 22478999999999875544
No 84
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=75.26 E-value=1.7 Score=46.00 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=19.3
Q ss_pred CCCCeEEEEEcCccceEEEEEe
Q 008233 23 PFPEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 23 ~~~~~vvGIDfGTt~s~va~~~ 44 (573)
+|+..++|||+|||++++++++
T Consensus 2 ~mm~~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 2 SLAFYIATFDIGTTEVKAALAD 23 (511)
T ss_dssp CCCCEEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeCCCceEEEEEC
Confidence 4567999999999999999984
No 85
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=74.03 E-value=3.3 Score=35.31 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEeCC
Q 008233 25 PEIAIGIDIGTSQCSIAFWNGS 46 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~~~ 46 (573)
+..++|||+|+..+++|+.+..
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETT
T ss_pred CCeEEEEEeCCCEEEEEEEcCC
Confidence 3469999999999999998654
No 86
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=73.31 E-value=35 Score=35.04 Aligned_cols=57 Identities=9% Similarity=0.159 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHcC---CCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEE
Q 008233 176 SRFQLTRIERACAMAG---LHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSA 244 (573)
Q Consensus 176 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 244 (573)
...-.+.+++|.+.-| ++++.++|..+|+.++.++.. +.+.+-+=+|-||=-+-+-+
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~------------~~~~iglIlGTGtNa~y~e~ 218 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED------------PRCEIGLIVGTGTNACYMEE 218 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC------------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC------------CCceEEEEEeCCceEEEEEe
Confidence 3456788888887753 567999999999999876543 34555555677754433333
No 87
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=73.16 E-value=22 Score=36.82 Aligned_cols=81 Identities=9% Similarity=0.095 Sum_probs=46.0
Q ss_pred CeeeeechhHHHHHHHHHhhcccc-c-------ccCCCCCccEEEEEecCCceeEEEEEEEeC--------------CeE
Q 008233 193 HVLRLMPEPTAVALLYAQQQQQSV-H-------ENLGSGSEKIAVIFNMGAGYCDVTVSATAG--------------GVS 250 (573)
Q Consensus 193 ~~~~li~Ep~AAal~y~~~~~~~~-~-------~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~--------------~~~ 250 (573)
..+++|+-.+=|.+.|..-..... . ... ....++++|+|+|||++.++...-.. ..+
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~-~~~~~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g~~y 228 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWI-RPRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHY 228 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEEC-SSCCCCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETTEEE
T ss_pred CceEEcCchHHhhhhHHHHHhhhccccccccccccc-ccCCCceEEEEcCCCceEEEeccCCccCCCCceEEEEeCCeeE
Confidence 356888877766666533221110 0 000 00145689999999999999874321 134
Q ss_pred EEEEeeccccchHHHHHHHHHHHH
Q 008233 251 QIKALSGSAIGGEDLLQNMMRHLM 274 (573)
Q Consensus 251 ~v~~~~g~~lGG~~iD~~l~~~l~ 274 (573)
.+-..+.-.+|-+..=+++...+.
T Consensus 229 ~lY~hS~LgyG~~~Ar~~~l~~l~ 252 (456)
T 3cj1_A 229 RVYTHSFLCYGRDQILLRLLASAL 252 (456)
T ss_dssp EEEEEEEETCSHHHHHHHHHHHHH
T ss_pred EEEEEecccchHHHHHHHHHHHHh
Confidence 555555555787666555554443
No 88
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=72.72 E-value=6 Score=39.59 Aligned_cols=51 Identities=10% Similarity=0.099 Sum_probs=29.9
Q ss_pred CCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEE
Q 008233 191 GLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSA 244 (573)
Q Consensus 191 Gl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 244 (573)
|+. +++|+-.+=|.+.|.--..... .......++++|+|+|||++.+++..
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~--~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLD--TLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTT--CSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhh--hccccccccEEEEEeCCCceEEEEec
Confidence 544 4667666555555543221110 00001245799999999999999873
No 89
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=72.40 E-value=2 Score=45.97 Aligned_cols=23 Identities=22% Similarity=0.517 Sum_probs=18.3
Q ss_pred CCCCCeEEEEEcCccceEEEEEe
Q 008233 22 SPFPEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 22 ~~~~~~vvGIDfGTt~s~va~~~ 44 (573)
|+.+..++|||+|||++++++++
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 1 MSLASYFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp ---CCEEEEEEECSSEEEEEEEE
T ss_pred CCCCcEEEEEEECcccEEEEEEC
Confidence 34456899999999999999985
No 90
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=71.76 E-value=2.7 Score=44.51 Aligned_cols=23 Identities=17% Similarity=0.466 Sum_probs=19.5
Q ss_pred CCCCCeEEEEEcCccceEEEEEe
Q 008233 22 SPFPEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 22 ~~~~~~vvGIDfGTt~s~va~~~ 44 (573)
|+.+..++|||+|||++++++++
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 1 MSLRTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp -CCSCEEEEEEECSSEEEEEEEE
T ss_pred CCCCcEEEEEEeccccEEEEEEE
Confidence 34566899999999999999997
No 91
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=70.60 E-value=3.1 Score=33.21 Aligned_cols=19 Identities=16% Similarity=0.249 Sum_probs=16.7
Q ss_pred eEEEEEcCccceEEEEEeC
Q 008233 27 IAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~~ 45 (573)
.++|||+|+..+++|+.+.
T Consensus 2 riLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CEEEEEESSSEEEEEEECS
T ss_pred cEEEEEeCCCEEEEEEEeC
Confidence 4899999999999999754
No 92
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=70.12 E-value=2.9 Score=44.35 Aligned_cols=22 Identities=18% Similarity=0.301 Sum_probs=18.9
Q ss_pred CCCCeEEEEEcCccceEEEEEe
Q 008233 23 PFPEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 23 ~~~~~vvGIDfGTt~s~va~~~ 44 (573)
+|...++|||+|||++++++++
T Consensus 23 MM~~~~lgIDiGtts~k~~l~d 44 (520)
T 4e1j_A 23 MMGGYILAIDQGTTSTRAIVFD 44 (520)
T ss_dssp CCSCEEEEEEECSSEEEEEEEC
T ss_pred HhhCeEEEEEeCCcceEEEEEC
Confidence 3446899999999999999984
No 93
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=70.10 E-value=27 Score=33.77 Aligned_cols=51 Identities=12% Similarity=0.128 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 180 LTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 180 r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
++.+.+. .|++ +.+.|+..|||++-....... ..++++++-+|-| +=.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~~--------~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEAX--------GLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTTT--------TCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCCC--------CCCcEEEEEECCc-eEEEEE
Confidence 3444443 4776 589999999999765543221 2467788888765 334443
No 94
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=68.98 E-value=16 Score=34.99 Aligned_cols=49 Identities=16% Similarity=0.069 Sum_probs=33.0
Q ss_pred CCeEEEEcCCcCcHHHHHHHHhHcCC-----------ccccCCCCCccceehhHHHHhHH
Q 008233 362 LNDVILVGGCSYIPKVRNLVQSTCKK-----------VELYEGINPLEAAVSGAALEGAV 410 (573)
Q Consensus 362 i~~V~LvGG~s~~p~v~~~l~~~f~~-----------~~i~~~~~p~~aVA~GAa~~a~~ 410 (573)
.+.|+|.||.+..+.+.+.+++.+.. .++......+.+.++||+.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 45899999988777777666655411 22333334567899999998764
No 95
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=68.07 E-value=46 Score=34.28 Aligned_cols=125 Identities=10% Similarity=0.073 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHcC---CCCCeEEEEeCCCCC------HHHHHHHHHHHHH-c---CC--CeeeeechhHHHHHHHHHh
Q 008233 147 IFLVELRAMAETQLK---RPIRNVVLTIPVSFS------RFQLTRIERACAM-A---GL--HVLRLMPEPTAVALLYAQQ 211 (573)
Q Consensus 147 ~~L~~l~~~a~~~~~---~~~~~~ViTVPa~f~------~~qr~~l~~Aa~~-A---Gl--~~~~li~Ep~AAal~y~~~ 211 (573)
..|+.|.+.|..... ...+.+.+-.-|..- ..+++.+.++++. . +| ..+++|+--+=|.++|..-
T Consensus 89 ~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~v 168 (452)
T 3zx3_A 89 AYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITI 168 (452)
T ss_dssp HHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHH
Confidence 456666666665422 123455554444331 1234444444433 2 44 3478888777666655443
Q ss_pred hcccccccCCCCCccEEEEEecCCceeEEEEEEEe---------------CCeEEEEEeeccccchHHHHHHHHHHH
Q 008233 212 QQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSATA---------------GGVSQIKALSGSAIGGEDLLQNMMRHL 273 (573)
Q Consensus 212 ~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~---------------~~~~~v~~~~g~~lGG~~iD~~l~~~l 273 (573)
..... .+......++.++|+|||++.++...-. +..+.+-..+.-.+|-+..-+++...+
T Consensus 169 nyllg--~l~~~~~~t~g~lDlGGgStQi~f~~~~~~~~~~~~~~~l~l~g~~y~lYthSyLgyG~~~Ar~r~l~~l 243 (452)
T 3zx3_A 169 NYLLG--RFKTPGGSTFGALDLGGASTQITFVPLNSTLEAPETSLQFRLYGTDYTVYTHSFLCYGKDQALWQKLAQD 243 (452)
T ss_dssp HHHTT--TTC---CCCCEEEEECSSEEEEEECCSSCCSSSGGGEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHH
T ss_pred Hhhhc--cccCCCCCceEEEecCCCceEEEeccCCCccCCCCceEEEEECCEEEEEEEEehhhccHHHHHHHHHHHH
Confidence 21110 0000013678899999999999876432 223455555555577666555544444
No 96
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=67.83 E-value=3.2 Score=43.82 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=18.9
Q ss_pred CCCeEEEEEcCccceEEEEEeC
Q 008233 24 FPEIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 24 ~~~~vvGIDfGTt~s~va~~~~ 45 (573)
.+..++|||+|||++++++++.
T Consensus 3 ~~~~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 3 EKNYVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp CCCEEEEEEECSSEEEEEEEET
T ss_pred CCCEEEEEEcCCCceEEEEECC
Confidence 3568999999999999999853
No 97
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=67.39 E-value=10 Score=40.42 Aligned_cols=66 Identities=15% Similarity=0.144 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccC-CCCCccceehhHHHHhHHhcC
Q 008233 343 KCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYE-GINPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 343 ~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~-~~~p~~aVA~GAa~~a~~~~~ 413 (573)
-+.+.+..+++..+ ++.|.|.||.+....+++.|.+..+-..+.. +..-|..+++|+|+++....+
T Consensus 294 ~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g 360 (576)
T 3ven_A 294 AVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELG 360 (576)
T ss_dssp HHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 33444445555443 6699999999999999999987653224433 334578899999999977655
No 98
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=67.37 E-value=3.4 Score=35.80 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=17.4
Q ss_pred CeEEEEEcCccceEEEEEeC
Q 008233 26 EIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~ 45 (573)
+.++|||+|+..+++|+.+.
T Consensus 3 mriLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEEccCCEEEEEEEEC
Confidence 46999999999999999753
No 99
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=66.90 E-value=31 Score=35.67 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHHHcC---CCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEE
Q 008233 176 SRFQLTRIERACAMAG---LHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSA 244 (573)
Q Consensus 176 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 244 (573)
...-.+.+++|.+.-| ++++.++|..+|.-++.++.. +.+.+-+=+|-||=-+-+-+
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~------------~~~~iGlI~GTGtNa~Y~E~ 242 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED------------HQCEVGMIVGTGCNACYMEE 242 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC------------TTEEEEEEESSSEEEEEEEE
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC------------CCceEEEEEecCCceEEeee
Confidence 3466788999998887 457899999999988776643 34566566787765433333
No 100
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=66.87 E-value=4.1 Score=43.06 Aligned_cols=23 Identities=26% Similarity=0.277 Sum_probs=18.1
Q ss_pred CCCCeEEEEEcCccceEEEEEeC
Q 008233 23 PFPEIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 23 ~~~~~vvGIDfGTt~s~va~~~~ 45 (573)
+.+..++|||+|||++++++++.
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEET
T ss_pred ccCCEEEEEEecCcceEEEEECC
Confidence 34568999999999999999853
No 101
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=66.66 E-value=3.1 Score=44.73 Aligned_cols=23 Identities=22% Similarity=0.377 Sum_probs=18.1
Q ss_pred CCCCeEEEEEcCccceEEEEEeC
Q 008233 23 PFPEIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 23 ~~~~~vvGIDfGTt~s~va~~~~ 45 (573)
+.+..++|||+|||++++++.+.
T Consensus 2 ~~~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 2 SLTKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp ---CEEEEEEECSSEEEEEEEET
T ss_pred CCCCEEEEEecCCcceEEEEEEC
Confidence 34568999999999999999853
No 102
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=64.80 E-value=72 Score=36.15 Aligned_cols=57 Identities=12% Similarity=0.136 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHc-CC--CeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEE
Q 008233 176 SRFQLTRIERACAMA-GL--HVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSA 244 (573)
Q Consensus 176 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 244 (573)
...-.+.+++|...- ++ +++.++|...|++++.++.. ..+++-+=+|-|+=-.-+.+
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~------------~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE------------PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC------------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC------------CCcEEEEEEeCCeeEEEEEc
Confidence 556778888888654 55 58999999999998777652 35666666777755444443
No 103
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=64.69 E-value=1e+02 Score=31.65 Aligned_cols=63 Identities=13% Similarity=0.058 Sum_probs=43.4
Q ss_pred EeCCCCCHHHHHHHHHHHHHcCCCe--eeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEEE
Q 008233 170 TIPVSFSRFQLTRIERACAMAGLHV--LRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVSA 244 (573)
Q Consensus 170 TVPa~f~~~qr~~l~~Aa~~AGl~~--~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 244 (573)
.+|..-...-.+.+++|.+.-|+++ +.++|...|++++-++.. .++++-+=+|-|+=-.-+.+
T Consensus 165 ~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~------------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 165 SADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED------------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp CCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC------------TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC------------CCcEEEEEEeCCcceEEEEc
Confidence 3343335577888999988778874 599999999998777652 35666666787754433433
No 104
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=63.52 E-value=4.4 Score=42.71 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=18.4
Q ss_pred CCCeEEEEEcCccceEEEEEe
Q 008233 24 FPEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 24 ~~~~vvGIDfGTt~s~va~~~ 44 (573)
|+..++|||+|||++++++++
T Consensus 4 M~~~~lgIDiGtts~k~~l~d 24 (501)
T 3g25_A 4 MEKYILSIDQGTTSSRAILFN 24 (501)
T ss_dssp CCCEEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeCccceEEEEEc
Confidence 345899999999999999984
No 105
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=63.16 E-value=81 Score=31.41 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=18.2
Q ss_pred CCCeEEEEEcCccceEEEEEe
Q 008233 24 FPEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 24 ~~~~vvGIDfGTt~s~va~~~ 44 (573)
....++|||+|.|++.+++.+
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d 27 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ 27 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE
T ss_pred CCCEEEEEEECcceEEEEEEE
Confidence 345899999999999999876
No 106
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=62.06 E-value=4.3 Score=42.86 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEeC
Q 008233 25 PEIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~~ 45 (573)
+..++|||+|||++++++++.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCCceEEEEEcC
Confidence 358999999999999999853
No 107
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=62.00 E-value=16 Score=35.23 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=36.5
Q ss_pred CCeEEEEcCCcCcHHHHHHHHhHcCC-----ccccCCCCCccceehhHHHHhHHh
Q 008233 362 LNDVILVGGCSYIPKVRNLVQSTCKK-----VELYEGINPLEAAVSGAALEGAVT 411 (573)
Q Consensus 362 i~~V~LvGG~s~~p~v~~~l~~~f~~-----~~i~~~~~p~~aVA~GAa~~a~~~ 411 (573)
.+.|+|-||.+..+.+.+.|++.+.. .++......+.+.++||+.++...
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 46899999999887777777777632 134444556789999999888643
No 108
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=61.96 E-value=3.5 Score=43.22 Aligned_cols=20 Identities=25% Similarity=0.679 Sum_probs=16.1
Q ss_pred CCeEEEEEcCccceEEEEEe
Q 008233 25 PEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~ 44 (573)
+..++|||+|||++++++++
T Consensus 5 m~~~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp ---CEEEEECSSEEEEEEEC
T ss_pred hceEEEEEcCCCCeEEEEEE
Confidence 45899999999999999985
No 109
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=61.88 E-value=4.5 Score=42.91 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=17.4
Q ss_pred CeEEEEEcCccceEEEEEe
Q 008233 26 EIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~ 44 (573)
..++|||+|||.+++++++
T Consensus 4 kYvlgID~GTss~Ka~l~d 22 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMD 22 (526)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEccccceeeeEEc
Confidence 4899999999999999884
No 110
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=60.00 E-value=13 Score=35.62 Aligned_cols=48 Identities=21% Similarity=0.195 Sum_probs=33.2
Q ss_pred CCeEEEEcCCcCcHHHHHHHHhHcCCc------cccCCCCCccceehhHHHHhH
Q 008233 362 LNDVILVGGCSYIPKVRNLVQSTCKKV------ELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 362 i~~V~LvGG~s~~p~v~~~l~~~f~~~------~i~~~~~p~~aVA~GAa~~a~ 409 (573)
.+.|+|.||.+..+.+.+.+++.+... ++......+.+.++|||.++.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 457888998877777888887766321 233344456788999998764
No 111
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=59.80 E-value=5.4 Score=41.92 Aligned_cols=21 Identities=14% Similarity=0.400 Sum_probs=18.1
Q ss_pred CCeEEEEEcCccceEEEEEeC
Q 008233 25 PEIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~~ 45 (573)
+..++|||+|||++++++++.
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEecCCchhEEEEECC
Confidence 347999999999999999853
No 112
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=58.45 E-value=5.6 Score=42.30 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=18.2
Q ss_pred CCeEEEEEcCccceEEEEEeC
Q 008233 25 PEIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~~ 45 (573)
+..++|||+|||.+++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 358999999999999999853
No 113
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=56.96 E-value=7.1 Score=37.33 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=39.3
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--cCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHH
Q 008233 328 VTREEFEEVNQKVFEKCGSLITQCLHDAKVE--IEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAA 405 (573)
Q Consensus 328 itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~--~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa 405 (573)
+-++.-+.+-.-++.-....|+..+++.... ...--.|+++||.+.+ +... +.....+|+ .+-.|..
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~--l~~~--------~~~~~~~~~-LvL~GL~ 250 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASL--FDKQ--------GLYDHLVPD-LVLQGIR 250 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGG--GTTT--------TCCSEECTT-HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHH--hccC--------CCCCEECcC-hHHHHHH
Confidence 4556667776667766666666666543211 1111269999998862 2222 111123444 5677877
Q ss_pred HHhH
Q 008233 406 LEGA 409 (573)
Q Consensus 406 ~~a~ 409 (573)
+...
T Consensus 251 ~i~~ 254 (266)
T 3djc_A 251 LAAM 254 (266)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 114
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=56.65 E-value=13 Score=32.48 Aligned_cols=18 Identities=28% Similarity=0.434 Sum_probs=16.2
Q ss_pred eEEEEEcCccceEEEEEe
Q 008233 27 IAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~ 44 (573)
.++|||-|++++..++..
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999883
No 115
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=56.16 E-value=6.8 Score=41.33 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=17.4
Q ss_pred CeEEEEEcCccceEEEEEe
Q 008233 26 EIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~ 44 (573)
..++|||+|||++++++++
T Consensus 3 ~~~lgIDiGtts~k~~l~d 21 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMD 21 (510)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEcCCcceEEEEEC
Confidence 4899999999999999984
No 116
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=55.64 E-value=6.2 Score=41.56 Aligned_cols=20 Identities=20% Similarity=0.491 Sum_probs=17.7
Q ss_pred CeEEEEEcCccceEEEEEeC
Q 008233 26 EIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~ 45 (573)
..++|||+|||++++++++.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET
T ss_pred cEEEEEEeCCcceEEEEECC
Confidence 47899999999999999853
No 117
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=53.76 E-value=7.2 Score=40.85 Aligned_cols=20 Identities=15% Similarity=0.285 Sum_probs=17.5
Q ss_pred CCeEEEEEcCccceEEEEEe
Q 008233 25 PEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~ 44 (573)
+..++|||+|||++++++.+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 44689999999999999984
No 118
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=53.44 E-value=12 Score=36.82 Aligned_cols=71 Identities=13% Similarity=0.122 Sum_probs=40.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHH----HHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccc---cCCCCCcccee
Q 008233 329 TREEFEEVNQKVFEKCGSLIT----QCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVEL---YEGINPLEAAV 401 (573)
Q Consensus 329 tr~~fe~l~~~~~~~~~~~i~----~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i---~~~~~p~~aVA 401 (573)
+.++.+++.+.+.++..+.|. +++++.+ ++.|+.+||. ++|-..+.+.++-..+ ..+.+.+.+-|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 567777776666555555554 4444443 3378999977 4666665544311110 11223556788
Q ss_pred hhHHHH
Q 008233 402 SGAALE 407 (573)
Q Consensus 402 ~GAa~~ 407 (573)
.|+|++
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 899855
No 119
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=52.22 E-value=6 Score=38.22 Aligned_cols=69 Identities=6% Similarity=-0.010 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCc--HHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHh
Q 008233 336 VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYI--PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVT 411 (573)
Q Consensus 336 l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~--p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~ 411 (573)
....++++..+.+-..+ ..... .+.+.|+|.||.++. +.+++.+++... ++ ..|..+...||+.++...
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~~-~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRYN-RPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGGC-CTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH-hcccC-CCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHhh
Confidence 44455555555555555 22211 145689999998876 666666666431 22 235588999999998653
No 120
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=51.91 E-value=8.8 Score=37.27 Aligned_cols=65 Identities=15% Similarity=0.083 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcC--cHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHH
Q 008233 336 VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSY--IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAV 410 (573)
Q Consensus 336 l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~--~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~ 410 (573)
.+..++++..+.+-..+...-.. +.+.|+|.||.+. .|++.+.+++.+ ..|+.+.+.||+++|..
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i--------~~~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRL--------VAPQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHC--------CCCSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhc--------cCCCCCHHHHHHHHHhh
Confidence 34455566666565555553222 5568999999764 456666666643 12567889999998753
No 121
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=51.56 E-value=7.6 Score=40.76 Aligned_cols=20 Identities=15% Similarity=0.326 Sum_probs=17.1
Q ss_pred CeEEEEEcCccceEEEEEeC
Q 008233 26 EIAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~ 45 (573)
..++|||+|||++++++++.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT
T ss_pred cEEEEEeeCCcceEEEEECC
Confidence 36899999999999999843
No 122
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=50.14 E-value=17 Score=31.93 Aligned_cols=18 Identities=22% Similarity=0.431 Sum_probs=16.3
Q ss_pred eEEEEEcCccceEEEEEe
Q 008233 27 IAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~ 44 (573)
.++|||-|++++++++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 689999999999999873
No 123
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=47.89 E-value=46 Score=33.21 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=31.5
Q ss_pred CCeEEEEcCCcCc-HHHHHHHHhHcCC-------ccccCCCCCccceehhHHHHhH
Q 008233 362 LNDVILVGGCSYI-PKVRNLVQSTCKK-------VELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 362 i~~V~LvGG~s~~-p~v~~~l~~~f~~-------~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
.+.|+|.||.+.. +.+.+.+++.+.. .++......+.+.+.|||.++.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4579999998764 6676666655421 2233333455689999998875
No 124
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=47.16 E-value=52 Score=31.79 Aligned_cols=50 Identities=22% Similarity=0.225 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCcCc-----HHHHHHHHhHcC------CccccCCCCCccceehhHHHHhHH
Q 008233 361 DLNDVILVGGCSYI-----PKVRNLVQSTCK------KVELYEGINPLEAAVSGAALEGAV 410 (573)
Q Consensus 361 ~i~~V~LvGG~s~~-----p~v~~~l~~~f~------~~~i~~~~~p~~aVA~GAa~~a~~ 410 (573)
+.+.|+|-||.++. +.+++.+++.+. ..++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 35689999988765 467777777652 123333444578899999998854
No 125
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=46.83 E-value=53 Score=34.13 Aligned_cols=29 Identities=10% Similarity=0.097 Sum_probs=23.8
Q ss_pred ccEEEEEecCCceeEEEEEEEeCC-eEEEE
Q 008233 225 EKIAVIFNMGAGYCDVTVSATAGG-VSQIK 253 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~~~-~~~v~ 253 (573)
.+.+|.+|+||.++-+.+++..++ .+++.
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 578999999999999999999765 34443
No 126
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=44.94 E-value=12 Score=39.23 Aligned_cols=19 Identities=21% Similarity=0.406 Sum_probs=17.1
Q ss_pred eEEEEEcCccceEEEEEeC
Q 008233 27 IAIGIDIGTSQCSIAFWNG 45 (573)
Q Consensus 27 ~vvGIDfGTt~s~va~~~~ 45 (573)
.++|||+|||++++++++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCcceEEEEECC
Confidence 6899999999999999853
No 127
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=41.81 E-value=36 Score=34.13 Aligned_cols=49 Identities=14% Similarity=0.164 Sum_probs=32.9
Q ss_pred CCCeEEEEcCCcCcHH-HHHHHHhHcCCc---cccCCCCCccceehhHHHHhH
Q 008233 361 DLNDVILVGGCSYIPK-VRNLVQSTCKKV---ELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 361 ~i~~V~LvGG~s~~p~-v~~~l~~~f~~~---~i~~~~~p~~aVA~GAa~~a~ 409 (573)
+++.|+|.||.+..+. +.+.|++.+... .+......+.+.++||+.++.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 4679999999887544 777777777321 233233334589999998764
No 128
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=41.64 E-value=13 Score=38.68 Aligned_cols=17 Identities=47% Similarity=0.739 Sum_probs=15.7
Q ss_pred EEEEEcCccceEEEEEe
Q 008233 28 AIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 28 vvGIDfGTt~s~va~~~ 44 (573)
++|||+|||++++++.+
T Consensus 2 ~lgiDiGtt~~k~~l~d 18 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLN 18 (484)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEecCcccEEEEEC
Confidence 69999999999999985
No 129
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=41.47 E-value=86 Score=32.28 Aligned_cols=51 Identities=20% Similarity=0.087 Sum_probs=33.2
Q ss_pred ccEEEEEecCCceeEEEEEEEeCCe---EEEEEeeccc-c---chHHHHHHHHHHHHH
Q 008233 225 EKIAVIFNMGAGYCDVTVSATAGGV---SQIKALSGSA-I---GGEDLLQNMMRHLMP 275 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~~~~---~~v~~~~g~~-l---GG~~iD~~l~~~l~~ 275 (573)
.+.++.+|+||.++-+.++...++. ++.....-.. + ++.++=..|++.+.+
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999998765 2222111111 2 566665555555544
No 130
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=39.25 E-value=44 Score=33.23 Aligned_cols=20 Identities=15% Similarity=0.325 Sum_probs=17.7
Q ss_pred CCeEEEEEcCccceEEEEEe
Q 008233 25 PEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 25 ~~~vvGIDfGTt~s~va~~~ 44 (573)
+..++|||+|.|++.+++.+
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d 47 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVR 47 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEe
Confidence 45899999999999999885
No 131
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=38.85 E-value=52 Score=35.40 Aligned_cols=58 Identities=12% Similarity=0.216 Sum_probs=44.3
Q ss_pred EEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHH
Q 008233 324 VSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQ 382 (573)
Q Consensus 324 ~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~ 382 (573)
-.+.||..+.+++..- -.-+..-++-.|+.++++.++|+.|+|.||++.-=-+.+.+.
T Consensus 498 ~~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 498 KDIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp SCEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred CcEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 3588999999986542 233455677888899999999999999999988555555554
No 132
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=38.53 E-value=23 Score=33.84 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=19.1
Q ss_pred CCCeEEEEEcCccceEEEEEe-CCc
Q 008233 24 FPEIAIGIDIGTSQCSIAFWN-GSE 47 (573)
Q Consensus 24 ~~~~vvGIDfGTt~s~va~~~-~~~ 47 (573)
+....+.||.|+|++++++++ +++
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEETTTE
T ss_pred ccCcEEEEEeCCCeeEEEEEeCCCE
Confidence 445789999999999999987 543
No 133
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=36.10 E-value=39 Score=32.64 Aligned_cols=48 Identities=8% Similarity=0.058 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcC
Q 008233 336 VNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCK 386 (573)
Q Consensus 336 l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~ 386 (573)
+.+...+.+.+.++++|+++++++++|++|+.-|++.++ -+.+.+.|+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 344456677889999999999999999999999987653 456788884
No 134
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=36.03 E-value=24 Score=33.64 Aligned_cols=73 Identities=12% Similarity=0.196 Sum_probs=39.9
Q ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHH
Q 008233 328 VTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALE 407 (573)
Q Consensus 328 itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~ 407 (573)
+-++.-+.+-.-++.-....|+..+++.......--.|+++||.+. .+.+ .++ .....+|+ .+-.|..+.
T Consensus 180 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~--~l~~----~~~---~~~~~~~~-LvL~GL~~i 249 (268)
T 2h3g_X 180 VGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK--LISE----ESN---VIDVVDPF-LTLKGLYML 249 (268)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH--HHHH----HCS---SCSEECTT-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH--HHHh----hCC---CCCEECcc-hHHHHHHHH
Confidence 4455666666666666666666555543211111227999999865 4433 331 11233444 466788776
Q ss_pred hHH
Q 008233 408 GAV 410 (573)
Q Consensus 408 a~~ 410 (573)
...
T Consensus 250 ~~~ 252 (268)
T 2h3g_X 250 YER 252 (268)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 135
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=35.46 E-value=4.1 Score=39.43 Aligned_cols=68 Identities=9% Similarity=0.063 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhH
Q 008233 337 NQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 337 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
...++++..+.+-..+ .... ..+.+.|+|.||.+.. +.+.|++.+....+ ....++.+.+.||++++.
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~-~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGI-QIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTC-CEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCc-EEeecCCCHHHHHHHHHH
Confidence 3345555555555555 2222 1145689999998765 66666666632111 111345788899998874
No 136
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=34.84 E-value=26 Score=33.83 Aligned_cols=44 Identities=16% Similarity=0.151 Sum_probs=30.8
Q ss_pred CeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhH
Q 008233 363 NDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGA 409 (573)
Q Consensus 363 ~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~ 409 (573)
..|.|+|........+..|+. + +.++ ...++++++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~-G~~~-~~~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-I-GREV-SAVAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-T-TCCE-EEEEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCc-eecCHHHHHHHHHHHHHH
Confidence 469999999888888888875 4 3332 223778888788665443
No 137
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=33.86 E-value=25 Score=33.69 Aligned_cols=58 Identities=7% Similarity=0.017 Sum_probs=37.2
Q ss_pred CCeEEEEeCCCCCHH-HHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCce
Q 008233 164 IRNVVLTIPVSFSRF-QLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGY 237 (573)
Q Consensus 164 ~~~~ViTVPa~f~~~-qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT 237 (573)
+..+.|++|.. +.. ....+.+..+..|+ .+.+.|+..|||++-.. .++++++-+|-|.
T Consensus 60 ~~~igi~~~G~-~~~~~~~~l~~~l~~~~~-pv~v~ND~~aaa~~e~~--------------~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 60 ADVVGMGVAGL-DSKFDWENFTPLASLIAP-KVIIQHDGVIALFAETL--------------GEPGVVVIAGTGS 118 (299)
T ss_dssp CSEEEEEETTC-CSHHHHHHHHHHHTTSSS-EEEEEEHHHHHHHHHHT--------------TSCEEEEEESSSE
T ss_pred CCEEEEEcCCC-CchhHHHHHHHHHHhCCC-CEEEeCcHHHHHhhccC--------------CCCeEEEEecCCE
Confidence 56899999988 532 33344444433343 46788999999886431 2456677788883
No 138
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=33.57 E-value=28 Score=26.79 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=25.3
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCe
Q 008233 167 VVLTIPVSFSRFQLTRIERACAMAGLHV 194 (573)
Q Consensus 167 ~ViTVPa~f~~~qr~~l~~Aa~~AGl~~ 194 (573)
-.++.|+.++..+|..+.+.|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4688899999999999999999999854
No 139
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=33.45 E-value=18 Score=38.12 Aligned_cols=34 Identities=9% Similarity=0.088 Sum_probs=28.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCeeeee
Q 008233 165 RNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLM 198 (573)
Q Consensus 165 ~~~ViTVPa~f~~~qr~~l~~Aa~~AGl~~~~li 198 (573)
..++.-+|..++...-.++.+++...|+++...|
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i 164 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAI 164 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEE
Confidence 4455559999999999999999999999876544
No 140
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=32.84 E-value=28 Score=33.35 Aligned_cols=44 Identities=14% Similarity=0.011 Sum_probs=28.8
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHH-HcCC-CeeeeechhHHHHHH
Q 008233 163 PIRNVVLTIPVSFSRFQLTRIERACA-MAGL-HVLRLMPEPTAVALL 207 (573)
Q Consensus 163 ~~~~~ViTVPa~f~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~AAal~ 207 (573)
++..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~g 104 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARA 104 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHH
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHh
Confidence 4677899999764 222224444443 3465 468899999999986
No 141
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=31.75 E-value=70 Score=30.77 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCcCcH----HHHHHHHhHcCC------------ccccCCCCCccceehhHHHHhHH
Q 008233 361 DLNDVILVGGCSYIP----KVRNLVQSTCKK------------VELYEGINPLEAAVSGAALEGAV 410 (573)
Q Consensus 361 ~i~~V~LvGG~s~~p----~v~~~l~~~f~~------------~~i~~~~~p~~aVA~GAa~~a~~ 410 (573)
+.+.|+|-||.++.+ .+++.+++.... ..+....-.+.|.++|||.++..
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~ 289 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQ 289 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHHH
Confidence 356899999988754 455555554311 12333444567899999988753
No 142
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=30.51 E-value=1.2e+02 Score=29.45 Aligned_cols=44 Identities=16% Similarity=0.055 Sum_probs=28.8
Q ss_pred cCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 190 AGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 190 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
.|++ +.+.|+..|||++........ ..++++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~--------~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGK--------GLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTT--------TCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCC--------CCCcEEEEEECCC-EEEEEE
Confidence 3776 588999999998765432211 2467788888877 444444
No 143
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=29.93 E-value=30 Score=33.94 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=35.9
Q ss_pred CeEEEEcCCcCcHHHHHHHHhHcCCccccCCCCCccceehhHHHHhHHhcC
Q 008233 363 NDVILVGGCSYIPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSG 413 (573)
Q Consensus 363 ~~V~LvGG~s~~p~v~~~l~~~f~~~~i~~~~~p~~aVA~GAa~~a~~~~~ 413 (573)
..|.|+|........+..|+. + +..+ ...+++.++..|....+..+..
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~-~-G~~~-~~~d~d~a~~~GL~~~a~~~~~ 307 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALES-Q-GLNV-RAVDADEAVRAGLSAAARAIWP 307 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-T-TCEE-EEEEHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCc-eeeCHHHHHHHHHHHHHHHHHH
Confidence 479999999888888888876 4 3332 2347889999998877766554
No 144
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=29.01 E-value=31 Score=33.12 Aligned_cols=44 Identities=11% Similarity=0.121 Sum_probs=29.1
Q ss_pred cCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 190 AGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 190 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
.|++ +.+.|+..|||++-....... ..++++++-+|.| +=.+++
T Consensus 97 ~~~p-V~v~NDa~aaal~E~~~g~~~--------~~~~~~~l~~GtG-iG~giv 140 (297)
T 4htl_A 97 TGLP-VAIENDANCALLAEKWLGKGQ--------DLDDFLCLTIGTG-IGGGIF 140 (297)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT--------TCSSEEEEEESSS-EEEEEE
T ss_pred HCcC-EEEecHHHHHHHHHHHhCCCC--------CCCcEEEEEECcc-eEEEEE
Confidence 4776 589999999999765433221 2466888888876 334444
No 145
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=28.80 E-value=54 Score=31.67 Aligned_cols=46 Identities=9% Similarity=0.024 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcC
Q 008233 338 QKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCK 386 (573)
Q Consensus 338 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~ 386 (573)
+-..+.+.+.++++|+++++++++||+++.-|++.++ -+.+.+.|+
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3445677788999999999999999999999987653 456777773
No 146
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=28.72 E-value=56 Score=31.30 Aligned_cols=45 Identities=18% Similarity=0.123 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcC
Q 008233 339 KVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCK 386 (573)
Q Consensus 339 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~ 386 (573)
...+.+.+.++++|+++++++++||.+++-|+++++ -+.+.+.|+
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 345577788999999999999999999999987663 345777773
No 147
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=27.67 E-value=27 Score=33.46 Aligned_cols=44 Identities=14% Similarity=-0.050 Sum_probs=25.2
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHH-HcCC-CeeeeechhHHHHHHH
Q 008233 164 IRNVVLTIPVSFSRFQLTRIERACA-MAGL-HVLRLMPEPTAVALLY 208 (573)
Q Consensus 164 ~~~~ViTVPa~f~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~AAal~y 208 (573)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge 103 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGL 103 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHT
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhh
Confidence 456788888753 211123444333 3464 3678999999998853
No 148
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=26.59 E-value=1.8e+02 Score=31.22 Aligned_cols=98 Identities=13% Similarity=0.168 Sum_probs=64.1
Q ss_pred ccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccc---cchHHHHHHHHHHHHHhhhhhcCCCCccCHHHHHHHHHHHHH
Q 008233 225 EKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA---IGGEDLLQNMMRHLMPNSESLFSSYGMNEIKSMALLRVATQD 301 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~---lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 301 (573)
..+=+.+|+|-.|+-..++.+..|..--..+..++ +|.+-+++.-+ ..+. .
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~--a~~~---~--------------------- 258 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIY--VDEN---P--------------------- 258 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHH--HHHC---T---------------------
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHH--HhcC---c---------------------
Confidence 34568999999999999999887755434444444 66655554321 1100 0
Q ss_pred hhhhcCCCceEEEEEEecCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHH
Q 008233 302 AIHKLSSETSVQINVDLGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKV 377 (573)
Q Consensus 302 ~K~~LS~~~~~~i~i~l~~g~d~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v 377 (573)
+-++++-+-+++.+.++|.++++++++++++|..+.++|-.+-.-++
T Consensus 259 -----------------------------~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLl 305 (631)
T 3zyy_X 259 -----------------------------DGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLF 305 (631)
T ss_dssp -----------------------------THHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHH
T ss_pred -----------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHH
Confidence 11233334456777888899999999999999999999966444333
No 149
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=25.72 E-value=47 Score=28.71 Aligned_cols=45 Identities=13% Similarity=0.165 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHcC-CCcCCCCeEEEEcCCcCcHHHHHHHHhH
Q 008233 339 KVFEKCGSLITQCLHDAK-VEIEDLNDVILVGGCSYIPKVRNLVQST 384 (573)
Q Consensus 339 ~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~s~~p~v~~~l~~~ 384 (573)
.+.+++.+-..+.|.+.+ ...++|+ ++-|=|+-.+|+.-+.+.+.
T Consensus 25 ~I~~~Ll~gA~~~l~~~G~v~~~~i~-v~~VPGafEiP~aa~~la~~ 70 (156)
T 3nq4_A 25 FINDSLLDGAVDALTRIGQVKDDNIT-VVWVPGAYELPLATEALAKS 70 (156)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTSEE-EEEESSTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceE-EEEcCcHHHHHHHHHHHHhc
Confidence 344555555667777888 7777775 77789999999999988654
No 150
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=25.37 E-value=1.9e+02 Score=29.49 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=24.5
Q ss_pred ccEEEEEecCCceeEEEEEEEeCCeEEEEE
Q 008233 225 EKIAVIFNMGAGYCDVTVSATAGGVSQIKA 254 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~ 254 (573)
.+.+|++|+||.++-+.++++.++ +++..
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 578999999999999999999776 55444
No 151
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=24.93 E-value=30 Score=37.29 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=23.5
Q ss_pred CCCCeEEEEEcCccceEEEEEeCCcEEEEe
Q 008233 23 PFPEIAIGIDIGTSQCSIAFWNGSEVELIK 52 (573)
Q Consensus 23 ~~~~~vvGIDfGTt~s~va~~~~~~~~ii~ 52 (573)
..+..+|-|.=|+.|.+|+.+.+-.|..|+
T Consensus 37 ~~~~~~IVIHpGS~~lRIG~AsD~~P~~ip 66 (655)
T 4am6_A 37 NDPTATIVIHPGSNSIKIGFPKDDHPVVVP 66 (655)
T ss_dssp CCGGGEEEEECCSSEEEEECTTSSSCEEEE
T ss_pred cCCCCeEEEcCCCcceeeeecCCCCCcccc
Confidence 344689999999999999998776665443
No 152
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=23.95 E-value=33 Score=31.72 Aligned_cols=19 Identities=32% Similarity=0.431 Sum_probs=16.0
Q ss_pred CCCCCeEEEEEcCccceEE
Q 008233 22 SPFPEIAIGIDIGTSQCSI 40 (573)
Q Consensus 22 ~~~~~~vvGIDfGTt~s~v 40 (573)
|+++..++|||+|.|++++
T Consensus 2 m~~~~~~lgiDIGGT~i~~ 20 (226)
T 3lm2_A 2 MAEDQTVLAIDIGGSHVKI 20 (226)
T ss_dssp CGGGCCEEEEEECSSEEEE
T ss_pred CCcCCEEEEEEECCCEEEE
Confidence 4556689999999999994
No 153
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=23.86 E-value=1e+02 Score=31.80 Aligned_cols=24 Identities=13% Similarity=0.153 Sum_probs=21.4
Q ss_pred ccEEEEEecCCceeEEEEEEEeCC
Q 008233 225 EKIAVIFNMGAGYCDVTVSATAGG 248 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~~~ 248 (573)
.+.+|.+|+||.+|-|.++++.++
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC-
T ss_pred ceEEEEEEecCceEEEEEEEECCC
Confidence 578999999999999999999764
No 154
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=23.84 E-value=56 Score=31.95 Aligned_cols=43 Identities=9% Similarity=0.059 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHc
Q 008233 340 VFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTC 385 (573)
Q Consensus 340 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f 385 (573)
..+.+.+.++++|+++++++++||+++.-|++.+ +-+.+.+.|
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~l 271 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLR---IIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH---HHHHHHHHh
Confidence 4567778899999999999999999999988765 344567777
No 155
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=23.51 E-value=62 Score=31.08 Aligned_cols=46 Identities=11% Similarity=0.083 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHcC
Q 008233 338 QKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTCK 386 (573)
Q Consensus 338 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~ 386 (573)
+...+.+...++++|+++++++++||.+++-+++.+ +-+.+.+.|+
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~---~~d~~~~~lg 253 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIR---IMESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhC
Confidence 344567778899999999999999999999988765 3345666773
No 156
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=23.46 E-value=1.9e+02 Score=27.78 Aligned_cols=52 Identities=12% Similarity=0.088 Sum_probs=33.7
Q ss_pred CccEEEEEecCCceeEEEEEEEeCCeEEEEEeeccccchHHHHHHHHHHHHH
Q 008233 224 SEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSAIGGEDLLQNMMRHLMP 275 (573)
Q Consensus 224 ~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~lGG~~iD~~l~~~l~~ 275 (573)
....++.+|+||..+.+.++...+..+..........+...+-+.+.+.+.+
T Consensus 22 ~~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~~~~~~~~~~i~~~i~~ 73 (327)
T 2ap1_A 22 SNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVEE 73 (327)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCEEEEEEEeCCCCEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 3567999999999999999987765543322222223555666666666543
No 157
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=23.41 E-value=41 Score=32.02 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=28.3
Q ss_pred cCCCeeeeechhHHHHHHHHHhhcccccccCCCCCccEEEEEecCCceeEEEEE
Q 008233 190 AGLHVLRLMPEPTAVALLYAQQQQQSVHENLGSGSEKIAVIFNMGAGYCDVTVS 243 (573)
Q Consensus 190 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~vlV~D~GggT~Dvsv~ 243 (573)
.|++ +.+.|+..|||++... ... ..++++++-+|.| +-.+++
T Consensus 94 ~~~p-v~v~NDa~aaa~~e~~-~~~---------~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 94 YQLP-VHLENDANCVGLSELL-AHP---------ELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GCCC-EEEEEHHHHHHHHHHH-HCT---------TCSSEEEEEESSS-EEEEEE
T ss_pred cCCC-EEEechHHHHHHHHHH-hcC---------CCCeEEEEEECCc-eEEEEE
Confidence 4665 5889999999997655 211 2467888888877 334444
No 158
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=23.06 E-value=2.1e+02 Score=29.25 Aligned_cols=23 Identities=13% Similarity=0.169 Sum_probs=21.2
Q ss_pred ccEEEEEecCCceeEEEEEEEeC
Q 008233 225 EKIAVIFNMGAGYCDVTVSATAG 247 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~~ 247 (573)
.+.+|.+|+||.++-+.+++..+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 57799999999999999999976
No 159
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=22.96 E-value=72 Score=31.90 Aligned_cols=21 Identities=10% Similarity=0.276 Sum_probs=18.5
Q ss_pred CeEEEEEcCccceEEEEEeCC
Q 008233 26 EIAIGIDIGTSQCSIAFWNGS 46 (573)
Q Consensus 26 ~~vvGIDfGTt~s~va~~~~~ 46 (573)
+.++|||+|.|++++++.+.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 368999999999999998754
No 160
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=22.78 E-value=59 Score=31.64 Aligned_cols=44 Identities=11% Similarity=0.137 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhHc
Q 008233 339 KVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLVQSTC 385 (573)
Q Consensus 339 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f 385 (573)
-..+.+.+.++++|+++++++++||++++-+++.++ -+.+.+.|
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~l 264 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 345677788999999999999999999998887653 34566676
No 161
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=22.45 E-value=3.4e+02 Score=26.47 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=29.6
Q ss_pred ccEEEEEecCCceeEEEEEEEe-CCeEEEEEeeccc--cch
Q 008233 225 EKIAVIFNMGAGYCDVTVSATA-GGVSQIKALSGSA--IGG 262 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~-~~~~~v~~~~g~~--lGG 262 (573)
...+.++|+|.-++-+.|+++. ++.++++...... +|-
T Consensus 15 ~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~ 55 (343)
T 3cer_A 15 SVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQ 55 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTT
T ss_pred CCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCC
Confidence 5679999999999999999998 4567776654443 653
No 162
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=21.68 E-value=55 Score=31.91 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=17.6
Q ss_pred CCCeEEEEEcCccceEEEEEe
Q 008233 24 FPEIAIGIDIGTSQCSIAFWN 44 (573)
Q Consensus 24 ~~~~vvGIDfGTt~s~va~~~ 44 (573)
.+..++|||+|.|++++++.+
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~d 32 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCD 32 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEechhheEEEEEE
Confidence 356899999999999999986
No 163
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=21.37 E-value=1.9e+02 Score=27.58 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=22.2
Q ss_pred ccEEEEEecCCceeEEEEEEEeCCeEE
Q 008233 225 EKIAVIFNMGAGYCDVTVSATAGGVSQ 251 (573)
Q Consensus 225 ~~~vlV~D~GggT~Dvsv~~~~~~~~~ 251 (573)
..+++.+|+|+..+.+.++...+..+.
T Consensus 5 ~~~~lgiDiggt~~~~~l~d~~g~il~ 31 (326)
T 2qm1_A 5 DKKIIGIDLGGTTIKFAILTTDGVVQQ 31 (326)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEE
T ss_pred ccEEEEEEECCCEEEEEEECCCCCEEE
Confidence 358999999999999999987765443
No 164
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=20.06 E-value=1.4e+02 Score=28.81 Aligned_cols=70 Identities=14% Similarity=0.315 Sum_probs=40.2
Q ss_pred CCCCeEEEEeCCC------------CCHHHHHHHHHHHHHcCCCeeeeechhHHHHHHHHHhhcccccccCCC---CCcc
Q 008233 162 RPIRNVVLTIPVS------------FSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSVHENLGS---GSEK 226 (573)
Q Consensus 162 ~~~~~~ViTVPa~------------f~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~---~~~~ 226 (573)
.++..+.|++|.. |... ++.+. +..|++.+.+.|+-.|+|++-........ ..+.. ...+
T Consensus 65 ~~i~gigi~~pG~vd~~~~~~~nl~w~~~-~~~l~---~~~~~p~V~v~NDanaaalgE~~~~~~~~-~~~g~g~~~~~~ 139 (332)
T 1sz2_A 65 VEVKDGCIAIACPITGDWVAMTNHTWAFS-IAEMK---KNLGFSHLEIINDFTAVSMAIPMLKKEHL-IQFGGAEPVEGK 139 (332)
T ss_dssp CCCCEEEEEESSCCCSSEECCSSSCCCEE-HHHHH---HHHTCSEEEEEEHHHHHHHHGGGCCGGGE-EECSSCCCCTTC
T ss_pred CCccEEEEEEeCceeCCEEeeeCCCCcCC-HHHHH---HHhCCCcEEEEeCHhHHhccccccChhhh-eecCCCCCCCCC
Confidence 3567788888763 3311 33333 34588867999999999986543210000 00000 1246
Q ss_pred EEEEEecCCc
Q 008233 227 IAVIFNMGAG 236 (573)
Q Consensus 227 ~vlV~D~Ggg 236 (573)
+++++-+|-|
T Consensus 140 ~~~~v~~GTG 149 (332)
T 1sz2_A 140 PIAVYGAGTG 149 (332)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEcCcc
Confidence 7888888887
Done!