BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008235
(573 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449441810|ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Cucumis sativus]
gi|449517699|ref|XP_004165882.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Cucumis sativus]
Length = 562
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 309/573 (53%), Positives = 399/573 (69%), Gaps = 22/573 (3%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNT-SSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLP 59
M KGDDA+ R+RNKA KKL +K+ SS VSARVA++IAAKKRR SGKRRQCQGMCFSLP
Sbjct: 1 MAKGDDALTRKRNKASRKKLRSKSGDSSAVSARVASIIAAKKRRMSGKRRQCQGMCFSLP 60
Query: 60 TLDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQ 119
T DDP+NDR K++T+ K +K +K F K KS + T RD
Sbjct: 61 TPDDPYNDRNGKKDTKVKPSKS--------SKREFPKEKSTSAPNGTLRD---------V 103
Query: 120 TKEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFL 179
E A + K +L ++ + ER + + N K G + E PSKFL
Sbjct: 104 CFENARSSKEGSGGTLPSGRVAKRSKTDPERTKEYGNAKGSVQGFQEEDSESSVAPSKFL 163
Query: 180 ILCLNAIENAMRHDGVEQDN-PLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVA 238
ILCL+AIENA+ HD ++ N PLF ++WGIEFWKCYSS KDIL+TSG SST +IAW+V+
Sbjct: 164 ILCLSAIENALYHDSIKSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVS 223
Query: 239 TAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQ 298
+AADSIARKEKEG SF+ PFLLFLV +QEKA ++RS+CKPLKA G+HTVS+HPGA++ HQ
Sbjct: 224 SAADSIARKEKEGSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQ 283
Query: 299 ITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL---IRQSI 355
I GL+SCEPEFLVSTPERLL+LV+++AID+SGVSLLVVD L+SLS+G L + IR+SI
Sbjct: 284 IQGLKSCEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSI 343
Query: 356 SGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL 415
S K HT+VF+D + VP +Q+LL G I RLSLN SVA QSACIIQS+N S++EK+
Sbjct: 344 SSKLHTIVFSDSFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLS 403
Query: 416 KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSV 475
K IQ LD A G +PLK+L+I+GK+ +L + LK KG+ I G+ C V IKN++
Sbjct: 404 KVIQALDRANGSQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKNNL 463
Query: 476 EADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ DG+ RP V+ D + I+T +L YE + + + YVEILT MARHT +G+LHSF
Sbjct: 464 KVDGKLRPVVAKTDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSF 523
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+K++A+ AG ++EILEQCGQ VP +R+L T
Sbjct: 524 ISKEEASVAGSLVEILEQCGQDVPKTVRNLSLT 556
>gi|224109924|ref|XP_002315356.1| predicted protein [Populus trichocarpa]
gi|222864396|gb|EEF01527.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/581 (50%), Positives = 366/581 (62%), Gaps = 99/581 (17%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDAV +++NK + KK+ + +S VSARVA++IAAKKRR SGKRR CQGMCFSLPT
Sbjct: 1 MAKGDDAVAKKKNKERRKKMQKEGSS--VSARVASIIAAKKRRLSGKRRMCQGMCFSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
LDDPFN D+N GK KKETK KP +
Sbjct: 59 LDDPFN---------------------DRN------GKLEFQKKETKN----KPS--ARK 85
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
EKA A E +DCPSKFL+
Sbjct: 86 NEKAF------------------------------------------ARENMDCPSKFLM 103
Query: 181 LCLNAIENAMRHDGV---EQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIV 237
LN IE A+RH+G ++D LFV+ WG+EF KCYS+ KDILETSGSS T QIAW+V
Sbjct: 104 YSLNEIEKALRHEGTYNDDEDESLFVSPWGVEFLKCYSTGKDILETSGSSCTTEQIAWVV 163
Query: 238 ATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH 297
+ AAD I RKE+E S P LFLV SQE+A KVR VCKPLKA GIHTVS+HPG++IDH
Sbjct: 164 SMAADIIVRKEEEDLSVPSPSFLFLVPSQEEAVKVRMVCKPLKALGIHTVSVHPGSSIDH 223
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKG---DTLSLIRQS 354
QI GL SCEPEFLVSTP+RLL+LVSLKAID+SGVS LVVD ++SL G + L IRQS
Sbjct: 224 QIHGLASCEPEFLVSTPDRLLELVSLKAIDISGVSFLVVDGVESLYNGGCLNALKSIRQS 283
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKI 414
ISG TVVFN+ + VP +QNLLLGSI RLS++QS+ QSACI+Q++N+C S+EE++
Sbjct: 284 ISGSLRTVVFNNFFSGACVPVLQNLLLGSICRLSIDQSIPIQSACIVQTINLCTSEEERL 343
Query: 415 LKGI--QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIK 472
LK Q LD+ + L VLY+VG D+ NLV L+ GY++S SN +S+
Sbjct: 344 LKVCTSQYLDNCF--------LLVLYVVGNDNSSFNLVKMLEINGYTVSVESNRSISN-- 393
Query: 473 NSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGIL 532
D R +P VS+I+ + IST L YE VI+P+F S+ NYV+ILT MARH++ G
Sbjct: 394 ----DDNRMKPVVSVINVERISTTNLAFYETVILPNFGPSIDNYVQILTRMARHSIKGNF 449
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTSPMLE 573
HSF TK+DA A ++ ILEQCGQ VP+ALR+L TS + E
Sbjct: 450 HSFLTKEDALIARPLMGILEQCGQAVPEALRNLHLTSSVPE 490
>gi|255580126|ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 493
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/429 (59%), Positives = 315/429 (73%), Gaps = 25/429 (5%)
Query: 150 RAEVHLNGKSCANGHHGQACEKLDCPSKFLILCLNAIENAMRHDGV--EQDNPLFVNSWG 207
R +V LNG H QAC+ D PSKF ILCLNAIE A+RHDG +++ PL VN WG
Sbjct: 85 REKVQLNGNDL--NHQEQACDYSDGPSKFFILCLNAIEKALRHDGTYNDEEKPLLVNPWG 142
Query: 208 IEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
+EF K S KDILETSGSS TI QIAWIV+ AAD+IARKEKEG SF+ PFLLFLV SQE
Sbjct: 143 LEFLKFCSIGKDILETSGSSCTIEQIAWIVSIAADAIARKEKEGLSFSSPFLLFLVPSQE 202
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
KAAKVR VCKPLK G+HTVSLH GA++DHQI GL+SCEPEFLVSTPERL++L+SLKAID
Sbjct: 203 KAAKVRMVCKPLKDLGVHTVSLHAGASLDHQIRGLKSCEPEFLVSTPERLMELISLKAID 262
Query: 328 VSGVSLLVVDRLDSLSKGDTL-SL--IRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSI 384
++GVS LVVD LDSL + +L SL IRQSISG PHTV FN+ + VPA+QNL +GSI
Sbjct: 263 ITGVSFLVVDGLDSLYQDGSLGSLKSIRQSISGNPHTVAFNNLFNHACVPALQNLFVGSI 322
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
NRLSL+ S+ SQSACI Q++ VC S+++K+ K S LK+L+IV +
Sbjct: 323 NRLSLSDSICSQSACIFQTIEVCTSEQKKLSK------------LCSHRLKLLFIVENNK 370
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVV 504
K +LV LK GYS+ST SNC VS++ D R +P VS+I+ +HISTA+L YE++
Sbjct: 371 KAASLVKILKSNGYSVSTESNCEVSNV------DTRMKPVVSVINAEHISTADLGVYEII 424
Query: 505 IVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRD 564
I+P+F++S+ NY++ILT MARHT GILHSF T++DA AG +IEILEQCGQ VP+ LR
Sbjct: 425 ILPNFVLSIDNYIQILTRMARHTTHGILHSFMTEEDALLAGPLIEILEQCGQAVPETLRT 484
Query: 565 LCHTSPMLE 573
L S M E
Sbjct: 485 LHLRSSMSE 493
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDD V ++RNKAK KKLN +N SSNVSARVA++IAAKKRR SGKRR CQGMCFSLPT
Sbjct: 1 MAKGDDTVTKKRNKAKRKKLNREN-SSNVSARVASIIAAKKRRLSGKRRMCQGMCFSLPT 59
Query: 61 LDDPFNDRYDKRETET----KATKKRNSLQLDKN 90
LDDPFN+R+ + + K R +QL+ N
Sbjct: 60 LDDPFNERHGRMDINVKDKKKKVNTREKVQLNGN 93
>gi|356500419|ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Glycine max]
Length = 563
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/534 (49%), Positives = 356/534 (66%), Gaps = 31/534 (5%)
Query: 51 CQGMCFSLPTLDDPFNDRYDKRETETKATKKRNSLQ----LDKNKNAFVKGK-SAVSKKE 105
CQGMCFSLPTLDDPFNDR K ET+TK KK++ + +D GK AV ++
Sbjct: 49 CQGMCFSLPTLDDPFNDRGGKEETKTKGPKKKSHSKPKDKMDHLNGKSADGKKGAVGGRK 108
Query: 106 TKRDNNEKPGHLEQTKEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHH 165
R+ N+ L++ E N K ++ N ER + + + G
Sbjct: 109 IARELND----LQRENESVTASNNLTHKCII----------NSERKNIDMTEMAHLCGTK 154
Query: 166 GQACEKLDCPSKFLILCLNAIENAMRHDGVEQD---NPLFVNSWGIEFWKCYSSAKDILE 222
+ C+ + PSKF+ CL++IENA+RH D N F+N WG+EF KCYS+ KD++E
Sbjct: 155 QRDCDISEFPSKFIFWCLSSIENALRHGDAYTDGEGNSFFLNPWGLEFLKCYSTGKDLIE 214
Query: 223 TSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF 282
TSG+S+T QIAW+V+ AAD+ RKEKEG SF GPFLLFLV SQEK+ +VR+VCKPLK+
Sbjct: 215 TSGTSATAEQIAWMVSGAADTFVRKEKEGLSFPGPFLLFLVPSQEKSTQVRTVCKPLKSV 274
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GIHTVS+HPGA++DHQI GL++CEPEFLVSTPERLL+LVS KAID+SGVS+LV+D L+++
Sbjct: 275 GIHTVSIHPGASLDHQIQGLKTCEPEFLVSTPERLLELVSTKAIDISGVSMLVIDGLNTI 334
Query: 343 ---SKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSAC 399
DT+ I+ ISG P V+FNDC+++ S+P V+ LL GSI R+SLN S+ S S+
Sbjct: 335 CSAGHADTVKSIKNCISGNPRVVIFNDCVSHMSIPMVRYLLTGSICRVSLNNSINSLSSY 394
Query: 400 IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYS 459
IIQSV VC S+E+K++ I+ LD + + +LYI+ KD K LV TLK KGYS
Sbjct: 395 IIQSVEVCTSEEDKVVMSIEALDQFQSNSTQNS--NMLYILSKDVKCHKLVKTLKSKGYS 452
Query: 460 ISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEI 519
+S S+ ++I + V++D +R AVS+ID IST ++ Y+VV++P F+ S+ YV I
Sbjct: 453 VSLDSD--AANINDRVDSD--RRAAVSLIDLVQISTTDIGTYDVVVLPSFVPSIDTYVHI 508
Query: 520 LTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTSPMLE 573
LT MAR +V+G+LHSF TK D A +I +LEQCGQ VP L+DL HTS MLE
Sbjct: 509 LTKMARTSVNGVLHSFLTKRDTELAAPLIAVLEQCGQEVPQTLQDLNHTSNMLE 562
>gi|357439969|ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355479310|gb|AES60513.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 532
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 286/571 (50%), Positives = 374/571 (65%), Gaps = 57/571 (9%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDD+V+++ NK KK N+KN+ VSA++AAVIA+KKRRK+GKRR C+GMCFSLP+
Sbjct: 1 MAKGDDSVLKKHNKKLRKKQNSKNS---VSAKIAAVIASKKRRKAGKRRICEGMCFSLPS 57
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
LDDPFNDR K E + K KK+ S Q K K VKGKS +K T
Sbjct: 58 LDDPFNDRQGKPEFKKKDPKKKTSSQ--KEKTTPVKGKSVPGEKGT-------------- 101
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
A+ + +KS E EV C H E D PSKF+
Sbjct: 102 ---AVGRNGANNKS--------------EMVEV------CCGEQHDN--EVSDFPSKFVF 136
Query: 181 LCLNAIENAMRHDGVEQD---NPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIV 237
CL+AIENA+RHD D N F+N WG+EF K +S+ KD+++T G+ +T QIAW+V
Sbjct: 137 WCLSAIENALRHDDAYTDGEGNSFFLNPWGLEFSKHFSTGKDLIDTGGTFATTEQIAWMV 196
Query: 238 ATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH 297
+ AAD RKEK+G S PFLLFLV S++KA +VR+VCKPLK+ GIHTVS+HPGA++DH
Sbjct: 197 SAAADIFVRKEKQGLSLDTPFLLFLVPSEKKAGQVRTVCKPLKSVGIHTVSVHPGASLDH 256
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK---GDTLSLIRQS 354
QI GL+SCEPEFL+STPERLL+LVSLKAID+SG+S+LV+D D++ K D + I++
Sbjct: 257 QIQGLKSCEPEFLISTPERLLELVSLKAIDISGISMLVIDGFDAICKAGHADAIKSIKKF 316
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKI 414
ISG P VVFND +TS+P V++LL G I R+S+N S+AS S+CI+QSV VC SDE+K+
Sbjct: 317 ISGNPSLVVFNDSFNHTSIPVVRHLLTGPICRISINNSIASLSSCIVQSVQVCTSDEDKL 376
Query: 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS 474
+K I+VL HS L LYI+ KD K LV TLK G S S S+ + I +S
Sbjct: 377 VKSIEVLRQFRSSQTHSSNL--LYILRKDVKCHKLVKTLKSMGCSTSLDSD--AATINDS 432
Query: 475 VEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHS 534
V+++ R V+MID + IST ++ Y+V+++P + SM Y ILT+MAR +V+GILH
Sbjct: 433 VDSNRR---LVTMIDLEDISTLDIGMYDVIVLPSLVPSMDTYEHILTNMARQSVNGILHG 489
Query: 535 FFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
F TK D HAG +I ILEQCGQ VP+ L+DL
Sbjct: 490 FLTKSDTEHAGPLISILEQCGQEVPETLKDL 520
>gi|15226904|ref|NP_180427.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
gi|4580397|gb|AAD24375.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|29824179|gb|AAP04050.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|330253053|gb|AEC08147.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
Length = 502
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/579 (44%), Positives = 353/579 (60%), Gaps = 97/579 (16%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDD V R++NK KK++ KN ++ VSAR+AA+IAAKKRRKSGKR CQGMCF+LPT
Sbjct: 1 MAKGDDNVQRKKNKVTRKKMSRKNDTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLPT 60
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
L+DPFN+R K + K K K +++ D P
Sbjct: 61 LEDPFNERQGKAD--------------------ITKKKKKKKKVKSREDKKPSP------ 94
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
+ I+GVEK G + ++LN
Sbjct: 95 ---------------MSIEGVEKMDGPPKFLMLNLN------------------------ 115
Query: 181 LCLNAIENAMRHD---GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIV 237
IE++ R D + D LF +SWGIEFWKCYSS DIL+TSG SST+ QIAWIV
Sbjct: 116 ----EIESSFRKDITYSEQHDKSLFTSSWGIEFWKCYSSGNDILDTSGMSSTVEQIAWIV 171
Query: 238 ATAADSIARKEKEGFSF------TGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHP 291
+TAAD+IAR+EK+ PFLL+LV SQ KA++VRSVCK LK GIHTVSLH
Sbjct: 172 STAADAIARREKDEVEEEEELLGNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQ 231
Query: 292 GAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL- 350
GA +DHQI+GL+S EPEF+V+TPERLL++V+LK +D+S VSLLV+D L SL G L+
Sbjct: 232 GAPLDHQISGLKSVEPEFIVATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAV 291
Query: 351 --IRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCA 408
I+Q+IS K T+VFN+ + + +PAVQ+ L GS+NR+++N+SVASQ +CI Q+V+VCA
Sbjct: 292 KSIKQAISSKHQTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCA 351
Query: 409 SDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIV 468
S+E+K+ K + H S K++YIV K+ F+ +++ LK KG S+ST S+ +
Sbjct: 352 SEEKKLQK--------FAKHLDSSSSKLIYIVTKEESFKKIMAILKLKGISVSTSSDSKL 403
Query: 469 SHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTV 528
S +K S ++P +ID + + T + + E V++PDF S++ Y +ILTSMAR +
Sbjct: 404 SEVKKS------RKPVAHLIDFEQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESA 457
Query: 529 SGILHSFFTKDDAA--HAGQMIEILEQCGQVVPDALRDL 565
G+LHS+ T+ DAA AG ++ +LE CGQ VPD R++
Sbjct: 458 HGVLHSYITEKDAASYQAGPLVNVLENCGQNVPDRWRNM 496
>gi|20259502|gb|AAM13871.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 522
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/576 (44%), Positives = 353/576 (61%), Gaps = 91/576 (15%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDD V R++NK KK++ KN ++ VSAR+AA+IAAKKRRKSGKR CQGMCF+LPT
Sbjct: 21 MAKGDDNVQRKKNKVTRKKMSRKNDTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLPT 80
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
L+DPFN+R K + K K K +++ D P
Sbjct: 81 LEDPFNERQGKAD--------------------ITKKKKKKKKVKSREDKKPSP------ 114
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
+ I+GVEK G + ++LN + S F
Sbjct: 115 ---------------MSIEGVEKMDGPPKFLMLNLN----------------EIESSF-- 141
Query: 181 LCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATA 240
I + +HD LF +SWGIEFWKCYSS DIL+TSG SST+ QIAWIV+TA
Sbjct: 142 --RKDITYSEQHD-----KSLFTSSWGIEFWKCYSSGNDILDTSGMSSTVEQIAWIVSTA 194
Query: 241 ADSIARKEKEGFSF------TGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAA 294
AD+IAR+EK+ PFLL+LV SQ KA++VRSVCK LK GIHTVSLH GA
Sbjct: 195 ADAIARREKDEVEEEEELLGNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQGAP 254
Query: 295 IDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL---I 351
+DHQI+GL+S EPEF+V+TPERLL++V+LK +D+S VSLLV+D L SL G L+ I
Sbjct: 255 LDHQISGLKSVEPEFIVATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSI 314
Query: 352 RQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE 411
+Q+IS K T+VFN+ + + +PAVQ+ L GS+NR+++N+SVASQ +CI Q+V+VCAS+E
Sbjct: 315 KQAISSKHQTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEE 374
Query: 412 EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI 471
+K+ K + H S K++YIV K+ F+ +++ LK KG S+ST S+ +S +
Sbjct: 375 KKLQK--------FAKHLDSSSSKLIYIVTKEESFKKIMAILKLKGISVSTSSDSKLSEV 426
Query: 472 KNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
K S ++P +ID + + T + + E V++PDF S++ Y +ILTSMAR + G+
Sbjct: 427 KKS------RKPVAHLIDFEQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGV 480
Query: 532 LHSFFTKDDAA--HAGQMIEILEQCGQVVPDALRDL 565
LHS+ T+ DAA AG ++ +LE CGQ VPD R++
Sbjct: 481 LHSYITEKDAASYQAGPLVNVLENCGQNVPDRWRNM 516
>gi|225449714|ref|XP_002268926.1| PREDICTED: uncharacterized protein LOC100260841 isoform 2 [Vitis
vinifera]
Length = 407
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/412 (57%), Positives = 305/412 (74%), Gaps = 13/412 (3%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R++NK+ KKL+ ++SS VSARVAA+IA+KKRRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDAIQRKKNKSNRKKLHKDSSSSAVSARVAAIIASKKRRKSGKRRICEGMCFSLPT 60
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
+DPFN+R++K++++ + TKK + D ++ G + T N+ H ++
Sbjct: 61 PEDPFNERHEKKDSKRQKTKKLVPSRQDGGLSS--NGTNTALTNGTLDGNHVNVDH-QEL 117
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKS-CANGHHGQACEKLDCPSKFL 179
K N+KN Q + L ID V G E+ ++ L GK +G Q+CE DCPSKFL
Sbjct: 118 KRHVKNIKNEQKEVLPSIDNV---GGKSEKGKIPLPGKGRIVHGQQQQSCENSDCPSKFL 174
Query: 180 ILCLNAIENAMRHDGV---EQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWI 236
ILCL +I++A++ D + ++D PLFVN WG+EFWKCYSS +ILETSG+ ST+ QIAW+
Sbjct: 175 ILCLKSIQSALQQDVIFNFKEDKPLFVNEWGVEFWKCYSSGINILETSGACSTLEQIAWM 234
Query: 237 VATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAID 296
++TAAD+IARKEKEG T PFLLFLV SQEKAAKVR+VCKPLKA GIHTVSLHPGA++D
Sbjct: 235 ISTAADTIARKEKEGLFLTSPFLLFLVPSQEKAAKVRAVCKPLKALGIHTVSLHPGASLD 294
Query: 297 HQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL---IRQ 353
HQI GL+SCEPEFLV+TPERLL+L+SLKAID+SGVSLLVVD LD+L KG L + IRQ
Sbjct: 295 HQIHGLKSCEPEFLVATPERLLELISLKAIDISGVSLLVVDGLDTLCKGGYLDMIKSIRQ 354
Query: 354 SISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN 405
SISG PH VVF++ + TSVP V++LL GS RL L S+ +QSACI QS++
Sbjct: 355 SISGNPHAVVFSERSSCTSVPGVEDLLRGSYCRLPLKGSINNQSACIAQSIH 406
>gi|297822571|ref|XP_002879168.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297325007|gb|EFH55427.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/412 (49%), Positives = 289/412 (70%), Gaps = 30/412 (7%)
Query: 170 EKLDCPSKFLILCLNAIENAMRHDGV---EQDNPLFVNSWGIEFWKCYSSAKDILETSGS 226
+K+D P KFL+L LN IE++ R D + D LF ++WGIEFWKC+SS KDILETSG
Sbjct: 102 KKMDGPPKFLMLNLNEIESSFRKDSTYSEQHDKSLFTSTWGIEFWKCFSSGKDILETSGM 161
Query: 227 SSTIVQIAWIVATAADSIARKEKEGFSFT--------GPFLLFLVSSQEKAAKVRSVCKP 278
SST+ QIAWIV++AAD+IAR+EK+ PFLL+LV SQ KA++VRSVCK
Sbjct: 162 SSTVEQIAWIVSSAADAIARREKDEEEEEEEEEEVGNSPFLLYLVPSQSKASQVRSVCKA 221
Query: 279 LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDR 338
LK GIHTVSLH GA++DHQI+GL+S EPEF+V+TPERLL++V+LK +D+S VSLLV+D
Sbjct: 222 LKGIGIHTVSLHQGASLDHQISGLKSVEPEFIVATPERLLEIVNLKGVDISSVSLLVIDE 281
Query: 339 LDSLSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVAS 395
L SL G D + I+Q+IS K ++VFND + +++PAVQ+LL SINR++++ SVAS
Sbjct: 282 LGSLCTGGYLDAVKSIKQAISSKHQSIVFNDSFSDSTIPAVQSLLGRSINRVTVSDSVAS 341
Query: 396 QSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKC 455
Q +CIIQ+VNVCAS+E+K+ K + +H S K+++IV K+ F+ + + LK
Sbjct: 342 QGSCIIQTVNVCASEEQKLQK--------FAEHLDSSSSKIIHIVTKEESFKKIKALLKL 393
Query: 456 KGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKN 515
KG S+S S+ +S +K S ++P +ID + + T + ++E V++PDF S++
Sbjct: 394 KGLSVSINSDSKISEVKKS------RKPVAHLIDIEQLDTTVMRDFETVLLPDFFPSIEI 447
Query: 516 YVEILTSMARHTVSGILHSFFTKDDAA--HAGQMIEILEQCGQVVPDALRDL 565
Y +ILTSMAR +V G+LHSF T+ +AA AG ++ ILE CGQ +PD R++
Sbjct: 448 YTQILTSMARESVHGVLHSFITEKEAASYRAGPLVTILEDCGQNIPDPWRNM 499
>gi|296090406|emb|CBI40225.3| unnamed protein product [Vitis vinifera]
Length = 370
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/412 (54%), Positives = 289/412 (70%), Gaps = 50/412 (12%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R++NK+ KKL+ ++SS VSARVAA+IA+KKRRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDAIQRKKNKSNRKKLHKDSSSSAVSARVAAIIASKKRRKSGKRRICEGMCFSLPT 60
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
+DPFN+R++K++++ + TKK L +
Sbjct: 61 PEDPFNERHEKKDSKRQKTKK-----------------------------------LVPS 85
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKS-CANGHHGQACEKLDCPSKFL 179
++ N + +L G ++ + L GK +G Q+CE DCPSKFL
Sbjct: 86 RQDGGLSSNGTNTAL--------TNGTLDGNHIPLPGKGRIVHGQQQQSCENSDCPSKFL 137
Query: 180 ILCLNAIENAMRHDGV---EQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWI 236
ILCL +I++A++ D + ++D PLFVN WG+EFWKCYSS +ILETSG+ ST+ QIAW+
Sbjct: 138 ILCLKSIQSALQQDVIFNFKEDKPLFVNEWGVEFWKCYSSGINILETSGACSTLEQIAWM 197
Query: 237 VATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAID 296
++TAAD+IARKEKEG T PFLLFLV SQEKAAKVR+VCKPLKA GIHTVSLHPGA++D
Sbjct: 198 ISTAADTIARKEKEGLFLTSPFLLFLVPSQEKAAKVRAVCKPLKALGIHTVSLHPGASLD 257
Query: 297 HQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL---IRQ 353
HQI GL+SCEPEFLV+TPERLL+L+SLKAID+SGVSLLVVD LD+L KG L + IRQ
Sbjct: 258 HQIHGLKSCEPEFLVATPERLLELISLKAIDISGVSLLVVDGLDTLCKGGYLDMIKSIRQ 317
Query: 354 SISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN 405
SISG PH VVF++ + TSVP V++LL GS RL L S+ +QSACI QS++
Sbjct: 318 SISGNPHAVVFSERSSCTSVPGVEDLLRGSYCRLPLKGSINNQSACIAQSIH 369
>gi|414882116|tpg|DAA59247.1| TPA: ATP-dependent RNA helicase [Zea mays]
Length = 525
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 231/576 (40%), Positives = 334/576 (57%), Gaps = 65/576 (11%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R+RN+ + K+L + + VSARVAA+IA+K RRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDALARKRNRVRRKRLRSSENA--VSARVAAIIASKHRRKSGKRRACEGMCFSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
DDPFN+R+ R+ + ++ + K K A +KK+ + +
Sbjct: 59 PDDPFNERHG-RKHKLDDEPADDTAADAAEDSGNPKKKGANTKKQ-----QPVAKYGAEA 112
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
K KA+ + + G E G+ +R PSKFL+
Sbjct: 113 KSKAVRERET---------GAEVVRGDFDR------------------------PSKFLV 139
Query: 181 LCLNAIENAMRHDGVEQDNPLF-VNSWGIEFWKCYSS--AKDILETSGSSSTIVQIAWIV 237
+CLNAI +A+ + E + WG+E W+C S+ D+L+ SG+ +T+ Q AW+V
Sbjct: 140 VCLNAIRDAVAPE--EGGGSIHGAGDWGVELWRCCSAQAPSDVLDASGACATVAQTAWLV 197
Query: 238 ATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH 297
+TA D +ARKE+ G + PFLL+LVSSQ+KAA+VRS+CKPLK GIH+VSLHPGA+I+H
Sbjct: 198 STACDIVARKERHGMVVSCPFLLYLVSSQDKAAQVRSICKPLKPLGIHSVSLHPGASIEH 257
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQS 354
QI+GL++CEPEFL++TPERLL+LVSLKAID+SGVS+LV+D L + D + IR +
Sbjct: 258 QISGLKTCEPEFLIATPERLLELVSLKAIDISGVSMLVIDGLKCFVDHNVSDKIFSIRDA 317
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKI 414
IS +F D +NLL G I +LS+N SV+S+SA I Q V+ C S+E K
Sbjct: 318 ISNNLQITIFTDPSDKNIATMAKNLLRGRITKLSINDSVSSRSAFIAQHVHFCPSEELKT 377
Query: 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS 474
K ++L+ DH + KVL + D K + + +LK + NC V I +S
Sbjct: 378 TKVKEILEQILQDH-PKKTSKVLLVAASDKKARLMSLSLKLE--------NCTV--IDDS 426
Query: 475 VEADGRKRPAVSMI-----DKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVS 529
+V ++ D++++S ++E +E V+V D S+ Y+EILT A H +
Sbjct: 427 CGNSFTICSSVGLMNVIVKDRENMSVTDVEAFETVLVVDLPPSVDEYIEILTGAALHVIG 486
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
G +HS F DA+ A + ++L CGQVVP+ L+ L
Sbjct: 487 GEVHSIFCNTDASVAKPLAQLLADCGQVVPEFLKSL 522
>gi|226496141|ref|NP_001150848.1| ATP-dependent RNA helicase [Zea mays]
gi|195642358|gb|ACG40647.1| ATP-dependent RNA helicase [Zea mays]
Length = 525
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 230/576 (39%), Positives = 334/576 (57%), Gaps = 65/576 (11%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R+RN+ + K+L + + VSARVAA+IA+K RRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDALARKRNRVRRKRLRSSENA--VSARVAAIIASKHRRKSGKRRACEGMCFSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
DDPFN+R+ R+ + ++ + K K A +KK+ + +
Sbjct: 59 PDDPFNERHG-RKHKLDDEPADDTAADAAEDSGNPKKKGANTKKQ-----QPVAKYGAEA 112
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
K KA+ + + G E G+ +R PSKFL+
Sbjct: 113 KSKAVRERET---------GAEVVRGDFDR------------------------PSKFLV 139
Query: 181 LCLNAIENAMRHDGVEQDNPLF-VNSWGIEFWKCYSS--AKDILETSGSSSTIVQIAWIV 237
+CLNAI +A+ + E + WG+E W+C S+ D+L+ SG+ +T+ Q AW+V
Sbjct: 140 VCLNAIRDAVAPE--EGGGSIHGAGDWGVELWRCCSAQAPSDVLDASGACATVAQTAWLV 197
Query: 238 ATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH 297
+TA D +ARKE+ G + PFLL+LVSSQ+KAA+V+S+CKPLK GIH+VSLHPGA+I+H
Sbjct: 198 STACDIVARKERHGMVVSCPFLLYLVSSQDKAAQVQSICKPLKPLGIHSVSLHPGASIEH 257
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQS 354
QI+GL++CEPEFL++TPERLL+LVSLKAID+SGVS+LV+D L + D + IR +
Sbjct: 258 QISGLKTCEPEFLIATPERLLELVSLKAIDISGVSMLVIDGLKCFVDHNVSDKIFSIRDA 317
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKI 414
IS +F D +NLL G I +LS+N SV+S+SA I Q V+ C S+E K
Sbjct: 318 ISNNLQITIFTDPSDKNIATMAKNLLRGRITKLSINDSVSSRSAFIAQHVHFCPSEELKT 377
Query: 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS 474
K ++L+ DH + KVL + D K + + +LK + NC V I +S
Sbjct: 378 TKVKEILEQILQDH-PKKTSKVLLVAASDKKARLMSLSLKLE--------NCTV--IDDS 426
Query: 475 VEADGRKRPAVSMI-----DKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVS 529
+V ++ D++++S ++E +E V+V D S+ Y+EILT A H +
Sbjct: 427 CGNSFTICSSVGLMNVIVKDRENMSVTDVEAFETVLVVDLPPSVDEYIEILTGAALHVIG 486
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
G +HS F DA+ A + ++L CGQVVP+ L+ L
Sbjct: 487 GEVHSIFCNTDASVAKPLAQLLADCGQVVPEFLKSL 522
>gi|242082802|ref|XP_002441826.1| hypothetical protein SORBIDRAFT_08g002960 [Sorghum bicolor]
gi|241942519|gb|EES15664.1| hypothetical protein SORBIDRAFT_08g002960 [Sorghum bicolor]
Length = 529
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 235/574 (40%), Positives = 329/574 (57%), Gaps = 57/574 (9%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R+RN+ + K+L + + VSARVAA+IA+K+RRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDALARKRNRVRRKRLRSSENA--VSARVAAIIASKRRRKSGKRRGCEGMCFSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
DDPFN+R+ K K V + T+ K G +
Sbjct: 59 PDDPFNERHGK--------------------------KRKVDDEPTEDTAAAKDG--DDP 90
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
K+K N K Q + + K + G G+ LD PSKFL+
Sbjct: 91 KKKGANTKKEQPVAKAGAEAKAKAKAKSKAVRERATG-----ADEGRV--DLDRPSKFLV 143
Query: 181 LCLNAIENAMR-HDGVEQDNPLFVNSWGIEFWKCYSS--AKDILETSGSSSTIVQIAWIV 237
+CLNAI + + DG + WG+E W+C S+ D+L+ SG+ +T+ Q AW+V
Sbjct: 144 VCLNAIRDTLAPEDGGGSIH--GAGDWGVELWRCCSAQAPSDVLDASGACATVDQTAWLV 201
Query: 238 ATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH 297
+TA D +ARKE+ G + PFLL+LV SQEKAA+VRS+CKPLK GIH+VSLHPGA+I+H
Sbjct: 202 STACDIVARKERLGMVVSCPFLLYLVPSQEKAAQVRSICKPLKPLGIHSVSLHPGASIEH 261
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQS 354
QI+GL++CEPEFL++TPERLL+LVSLKAID+S VS+LV+D L + D + IR +
Sbjct: 262 QISGLKTCEPEFLIATPERLLELVSLKAIDISSVSMLVIDGLKCFVDHNASDKIFSIRDA 321
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKI 414
IS P +F D ++LL G I +LS+N SV+S+SA I Q V+ C S+E K
Sbjct: 322 ISNNPQITIFTDPSDKKVAAMAKSLLRGRITKLSINDSVSSRSAFIAQHVHFCPSEELKT 381
Query: 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIV---SHI 471
K ++L+ H + KVL +V D K + + S+LK K NC V SH
Sbjct: 382 SKVKEILEGILQSH-PKKTSKVLLVVANDQKARYMSSSLKLK--------NCTVIDDSHG 432
Query: 472 KNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
+ V + D+++++ + EE+E V+V D S+ YVEILT +A H + G
Sbjct: 433 SSFTICSSLGLMNVIVKDRENMAVTDAEEFETVLVVDLPPSVDEYVEILTGVALHVIGGE 492
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
+HS F DA+ A + E+L C QVVP+ ++L
Sbjct: 493 VHSIFCNADASIAKPLAELLADCRQVVPEFFKNL 526
>gi|346703300|emb|CBX25398.1| hypothetical_protein [Oryza brachyantha]
Length = 509
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 321/573 (56%), Gaps = 75/573 (13%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R+R++ + K++ + + VSARVA +IA+K+RRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDALARKRSRVRRKRMRSSENA--VSARVAGIIASKRRRKSGKRRGCEGMCFSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLD---KNKNAFVKGKSAVSKKETKRDN--NEKPG 115
+DPFNDR+ K+ + D K KN K +++KK+ RD N K
Sbjct: 59 PEDPFNDRHGKKRKGDDDDDDVDGPAGDASAKKKN----KKDSIAKKKPARDAAANGKSK 114
Query: 116 HLEQTKEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCP 175
L +T+ + DG E D P
Sbjct: 115 PLPETEREK--------------DGAE-----------------------------YDRP 131
Query: 176 SKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAK--DILETSGSSSTIVQI 233
SKFL++CLNAI +A + SWG+E W C S+A D+L+TSG +T Q
Sbjct: 132 SKFLVVCLNAIRDAAASEDGGGGGIHDTGSWGVELWNCCSAAPPTDVLDTSGLCATREQT 191
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGA 293
AW+V+TA D +ARKEK G + PFLL+LV SQE A +VRS+CKPLK+ GIH+VSLHPGA
Sbjct: 192 AWLVSTACDIVARKEKLGVVVSCPFLLYLVPSQENAVQVRSICKPLKSLGIHSVSLHPGA 251
Query: 294 AIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ 353
+I+HQ++GL+SCEPEFL+STPERLL+LV+LKAID+SGVS+L L++ GD L IR
Sbjct: 252 SIEHQMSGLKSCEPEFLISTPERLLELVALKAIDISGVSMLCFMDLNA---GDKLCSIRD 308
Query: 354 SISGKPHTVVFNDCLTYTSVPAVQNLLLG-SINRLSLNQSVASQSACIIQSVNVCASDEE 412
+I P +F+D + LL G I RL N SV S+SA + Q +++C ++
Sbjct: 309 AILSSPQITIFSDPSDRSVAALATKLLHGRKIRRLCTNDSVTSRSAFVTQKIHICPRKDQ 368
Query: 413 KILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIK 472
K K Q+L+ +H + KVL + + + Q+L S+LK + +++ S+
Sbjct: 369 KAPKVKQILEQILTNH-AKKTAKVLLVAASNHEAQHLSSSLKLQNCTVTDDSH------D 421
Query: 473 NSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGIL 532
NS R D + ++ E+++ V+V D S+ Y ++LT +RH V G +
Sbjct: 422 NSFTICSR--------DWESMTATNFEDFDTVLVADLPPSVDEYTDVLTGASRHVVVGEV 473
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
H F+ DA A + ++L CGQVVP+ LR L
Sbjct: 474 HCIFSSADAPLAKPLSQVLTSCGQVVPEFLRKL 506
>gi|346703794|emb|CBX24462.1| hypothetical_protein [Oryza glaberrima]
Length = 525
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 229/577 (39%), Positives = 331/577 (57%), Gaps = 67/577 (11%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R+RNK + K++ + + VSARVA +IA+K+RRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDALARKRNKVRRKRMRSSENA--VSARVAGIIASKRRRKSGKRRACEGMCFSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
+ D ++ R + K++ + + A G+ KK+ K+ ++ +
Sbjct: 59 PE----DPFNDRHGK----KRKGDDEPTGDAPAAAAGRDESKKKKKKKKDSSAKKQPARE 110
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
A S++K DG E D PSKFL+
Sbjct: 111 AAAAAANAKSREK-----DGAE-----------------------------YDRPSKFLV 136
Query: 181 LCLNAIENAMRHD---GVEQDNPLFVNSWGIEFWKCYSSAKD--ILETSGSSSTIVQIAW 235
+CLNAI +A + G D SWG+E W C S+A +L+TSG +T + AW
Sbjct: 137 VCLNAIRDAAASEDGGGGIHDT----GSWGVELWNCCSAAPPTHVLDTSGECATREKTAW 192
Query: 236 IVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAI 295
+V+TA D +ARKEK G + PFLL+LV SQEKA +VRS+CKPLK+ GIH+VSLHPGA+I
Sbjct: 193 LVSTACDIVARKEKLGVVVSCPFLLYLVPSQEKAVQVRSICKPLKSLGIHSVSLHPGASI 252
Query: 296 DHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLV-VDRL---DSLSKGDTLSLI 351
+HQI+GL+SCEPEFL+STPERLL+L++LKAID+SGVS+LV +D L L+ D L I
Sbjct: 253 EHQISGLKSCEPEFLISTPERLLELIALKAIDISGVSMLVMIDGLKCFTDLNVSDKLCSI 312
Query: 352 RQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS--INRLSLNQSVASQSACIIQSVNVCAS 409
R +I P +F+D + V A+ L+G I RL N SV S+SA I Q +++C S
Sbjct: 313 RDAILSNPQITIFSD-PSDRRVAALATKLVGGKKITRLCTNDSVTSRSAFITQKIHICPS 371
Query: 410 DEEKILKGI-QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIV 468
++K K + ++L+ DH + KVL + D + Q+L S+LK + +++ S+
Sbjct: 372 KDQKAPKVVKEILEQILNDHAR-KTAKVLLVTASDHEAQHLSSSLKLQNCTVTNDSHGNS 430
Query: 469 SHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTV 528
I +SV V + D ++I+TA E+++ V+V D S+ Y+EIL + H +
Sbjct: 431 FTICSSVGLIN-----VLVKDWENITTANFEDFDTVLVADLPPSVDEYIEILAGASCHVL 485
Query: 529 SGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
G +H F+ DA A + E+L CGQVVP+ LR L
Sbjct: 486 VGEVHCIFSSADALLAKPLSEVLTSCGQVVPEFLRKL 522
>gi|357157722|ref|XP_003577892.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Brachypodium
distachyon]
Length = 521
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/403 (42%), Positives = 256/403 (63%), Gaps = 13/403 (3%)
Query: 170 EKLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAK--DILETSGSS 227
EK D PSKFL++CLNAI +A GV+ D SWG+EFWKC S++ D+L
Sbjct: 125 EKYDRPSKFLVVCLNAIRDAAAA-GVDGDLVHEDASWGLEFWKCCSASPPSDVLHAGEGC 183
Query: 228 STIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTV 287
+ AW+++ A D +ARKEK G PFLL++V SQE+A +VR +CKPLK+ GIH+V
Sbjct: 184 APPGLAAWLISAACDIVARKEKLGVVVPCPFLLYIVPSQERALEVRLICKPLKSLGIHSV 243
Query: 288 SLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS---LSK 344
SLHPGA+++HQI+GL+SCEPEFL+STPERLL+LVS KAID+S VS++ +D L + L+
Sbjct: 244 SLHPGASVEHQISGLKSCEPEFLISTPERLLELVSRKAIDISNVSMMAIDGLKTFMDLNI 303
Query: 345 GDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQ-SVASQSACIIQS 403
D L I+ +IS +FND ++VP V++LL G I +LS+N S+ +SA I Q
Sbjct: 304 SDKLYSIKGAISSDAQITIFNDTCDQSAVPVVKSLLRGRITKLSVNDCSLNHRSAFIAQH 363
Query: 404 VNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
++ C S+E+K + ++L+H D S+ KVL + D + QNL S+LK + ++
Sbjct: 364 IHFCPSEEKKATQVKEILEHVL-DSSASKTAKVLLVAADDHEAQNLASSLKLQTCAVIDD 422
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSM 523
+H + V + +D ++ +++EE+E+V+V D S+ +Y EI++ M
Sbjct: 423 -----THRGTFTICSSKGLINVLVKGQDSLAKSDIEEFEIVVVSDLPRSIDDYKEIISGM 477
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+RH VSG +H F+ DDAA A + ++L +CGQ+VP +R LC
Sbjct: 478 SRHAVSGEVHVIFSNDDAALADPLADVLSKCGQMVPKFVRKLC 520
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R+R K + K++ + + VS RVAA+IA+K+RRK+GKRR C+GMCFSLP+
Sbjct: 1 MAKGDDALARKRGKVRRKRMRSSENA--VSTRVAAIIASKRRRKTGKRRGCEGMCFSLPS 58
Query: 61 LDDPFNDRYDKRETE 75
+DPFNDR+ K++ +
Sbjct: 59 PEDPFNDRHGKKKKD 73
>gi|218186436|gb|EEC68863.1| hypothetical protein OsI_37464 [Oryza sativa Indica Group]
Length = 524
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 250/402 (62%), Gaps = 14/402 (3%)
Query: 171 KLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKD--ILETSGSSS 228
+ D PSKFL++CLNAI +A + SWG+E W C S+A +L+TSG +
Sbjct: 127 EYDRPSKFLVVCLNAIRDAAASEDGGGGGIHDTGSWGVELWNCCSAAPPTHVLDTSGECA 186
Query: 229 TIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVS 288
T + AW+V+TA D +ARKEK G + PFLL+LV SQEKA +VRS+CKPLK+ GIH+VS
Sbjct: 187 TREKTAWLVSTACDIVARKEKLGVVVSCPFLLYLVPSQEKAVQVRSICKPLKSLGIHSVS 246
Query: 289 LHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL---DSLSKG 345
LHPGA+I+HQI+GL+SCEPEFL+STPERLL+L++LKAID+SGVS+LV+D L L+
Sbjct: 247 LHPGASIEHQISGLKSCEPEFLISTPERLLELIALKAIDISGVSMLVIDGLKCFTDLNVS 306
Query: 346 DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS--INRLSLNQSVASQSACIIQS 403
D L IR +I P +F+D + V A+ L+G I RL N SV S+ A I Q
Sbjct: 307 DKLCSIRDAILSNPQITIFSD-PSDRRVAALATKLVGGKKITRLCTNDSVTSRGAFITQK 365
Query: 404 VNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
+++C S ++K K ++L+ DH + KVL + D + Q+L S+LK + +++
Sbjct: 366 IHICPSKDQKAPKVKEILEQILNDHAR-KTAKVLLVTASDHEAQHLSSSLKLQNCTVTND 424
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSM 523
S+ I +SV V + D ++I+TA E+++ V+V D S+ Y+EIL
Sbjct: 425 SHGNSFTICSSVGLIN-----VLVKDWENITTANFEDFDTVLVADLPPSVDEYIEILAGA 479
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
+ H + G +H F+ DA A + E+L CGQVVP+ LR L
Sbjct: 480 SCHVLVGEVHCIFSSADALLAKPLSEVLTSCGQVVPEFLRKL 521
>gi|222616637|gb|EEE52769.1| hypothetical protein OsJ_35218 [Oryza sativa Japonica Group]
Length = 517
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/402 (43%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 171 KLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKD--ILETSGSSS 228
+ D PSKFL++CLNAI +A + SWG+E W C S+A +L+TSG +
Sbjct: 120 EYDRPSKFLVVCLNAIRDAAASEDGGGGGIHDTGSWGVELWNCCSAAPPTHVLDTSGECA 179
Query: 229 TIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVS 288
T + AW+V+TA D +ARKEK + PFLL+LV SQEKA +VRS+CKPLK+ GIH+VS
Sbjct: 180 TREKTAWLVSTACDIVARKEKLAVVVSCPFLLYLVPSQEKAVQVRSICKPLKSLGIHSVS 239
Query: 289 LHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL---DSLSKG 345
LHPGA+I+HQI+GL+SCEPEFL+STPERLL+L++LKAID+SGVS+LV+D L L+
Sbjct: 240 LHPGASIEHQISGLKSCEPEFLISTPERLLELIALKAIDISGVSMLVIDGLKCFTDLNVS 299
Query: 346 DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS--INRLSLNQSVASQSACIIQS 403
D L IR +I P +F+D + V A+ L+G I RL N SV S+ A I Q
Sbjct: 300 DKLCSIRDAILSNPQITIFSD-PSDRRVAALATKLVGGKKITRLCTNDSVTSRGAFITQK 358
Query: 404 VNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
+++C S ++K K ++L+ DH + KVL + D + Q+L S+LK + +++
Sbjct: 359 IHICPSKDQKAPKVKEILEQILNDHAR-KTAKVLLVTASDHEAQHLSSSLKLQNCTVTND 417
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSM 523
S+ I +SV V + D ++I+TA E+++ V+V D S+ Y+EIL
Sbjct: 418 SHGNSFTICSSVGLIN-----VLVKDWENITTANFEDFDTVLVADLPPSVDEYIEILAGA 472
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
+ H + G +H F+ DA A + E+L CGQVVP+ LR L
Sbjct: 473 SCHVLVGEVHCIFSSADALLAKPLSEVLTSCGQVVPEFLRKL 514
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R+RNK + K++ + + VSARVA +IA+K+RRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDALARKRNKVRRKRMRSSENA--VSARVAGIIASKRRRKSGKRRACEGMCFSLPT 58
Query: 61 LDDPFNDRYDKR 72
+DPFNDR+ K+
Sbjct: 59 PEDPFNDRHGKK 70
>gi|115487334|ref|NP_001066154.1| Os12g0147500 [Oryza sativa Japonica Group]
gi|77552995|gb|ABA95791.1| ATP-dependent RNA helicase, putative, expressed [Oryza sativa
Japonica Group]
gi|113648661|dbj|BAF29173.1| Os12g0147500 [Oryza sativa Japonica Group]
gi|215694938|dbj|BAG90129.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 528
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/402 (43%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 171 KLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKD--ILETSGSSS 228
+ D PSKFL++CLNAI +A + SWG+E W C S+A +L+TSG +
Sbjct: 131 EYDRPSKFLVVCLNAIRDAAASEDGGGGGIHDTGSWGVELWNCCSAAPPTHVLDTSGECA 190
Query: 229 TIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVS 288
T + AW+V+TA D +ARKEK + PFLL+LV SQEKA +VRS+CKPLK+ GIH+VS
Sbjct: 191 TREKTAWLVSTACDIVARKEKLAVVVSCPFLLYLVPSQEKAVQVRSICKPLKSLGIHSVS 250
Query: 289 LHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL---DSLSKG 345
LHPGA+I+HQI+GL+SCEPEFL+STPERLL+L++LKAID+SGVS+LV+D L L+
Sbjct: 251 LHPGASIEHQISGLKSCEPEFLISTPERLLELIALKAIDISGVSMLVIDGLKCFTDLNVS 310
Query: 346 DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS--INRLSLNQSVASQSACIIQS 403
D L IR +I P +F+D + V A+ L+G I RL N SV S+ A I Q
Sbjct: 311 DKLCSIRDAILSNPQITIFSD-PSDRRVAALATKLVGGKKITRLCTNDSVTSRGAFITQK 369
Query: 404 VNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
+++C S ++K K ++L+ DH + KVL + D + Q+L S+LK + +++
Sbjct: 370 IHICPSKDQKAPKVKEILEQILNDHAR-KTAKVLLVTASDHEAQHLSSSLKLQNCTVTND 428
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSM 523
S+ I +SV V + D ++I+TA E+++ V+V D S+ Y+EIL
Sbjct: 429 SHGNSFTICSSVGLIN-----VLVKDWENITTANFEDFDTVLVADLPPSVDEYIEILAGA 483
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
+ H + G +H F+ DA A + E+L CGQVVP+ LR L
Sbjct: 484 SCHVLVGEVHCIFSSADALLAKPLSEVLTSCGQVVPEFLRKL 525
>gi|147818848|emb|CAN62967.1| hypothetical protein VITISV_032271 [Vitis vinifera]
Length = 299
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/309 (54%), Positives = 217/309 (70%), Gaps = 18/309 (5%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R++NK+ KKL+ ++SS VSARVAA+IA+KKRRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDAIQRKKNKSNRKKLHKDSSSSAVSARVAAIIASKKRRKSGKRRICEGMCFSLPT 60
Query: 61 LDDPFNDRYDKRETETKATKK----RNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGH 116
+DPFN+R++K++++ + TKK R L N + D+ E H
Sbjct: 61 PEDPFNERHEKKDSKRQKTKKLVPSRQDGGLSSNGTNTALTNGTLDGNHVNVDHQELKRH 120
Query: 117 LEQTKEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKS-CANGHHGQACEKLDCP 175
++ N+KN Q + L ID V G E+ ++ L GK +G Q+CE DCP
Sbjct: 121 VK-------NIKNEQKEVLPSIDNV---GGKSEKGKIPLPGKGRIVHGQQQQSCENSDCP 170
Query: 176 SKFLILCLNAIENAMRHDGV---EQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQ 232
SKFLILCL +I++A++ D + ++D PLFVN WG+EFWKCYSS +ILETSG+ ST+ Q
Sbjct: 171 SKFLILCLKSIQSALQQDVIFNFKEDKPLFVNEWGVEFWKCYSSGINILETSGACSTLEQ 230
Query: 233 IAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPG 292
IAW+++TAAD+IARKEKEG T PFLLFLV SQEKAAKVR+VCKPLKA GIHTVSLHPG
Sbjct: 231 IAWMISTAADTIARKEKEGLFLTSPFLLFLVPSQEKAAKVRAVCKPLKALGIHTVSLHPG 290
Query: 293 AAIDHQITG 301
A++DHQI G
Sbjct: 291 ASLDHQIHG 299
>gi|414882117|tpg|DAA59248.1| TPA: hypothetical protein ZEAMMB73_455537 [Zea mays]
Length = 265
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 179/304 (58%), Gaps = 46/304 (15%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ R + ++++ +++ + VSARVAA+IA+K RRKSGKRR C+GMCFSLPT
Sbjct: 1 MAKGDDALAR--KRNRVRRKRLRSSENAVSARVAAIIASKHRRKSGKRRACEGMCFSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
DDPFN+R+ R+ + ++ + K K A +KK+ + +
Sbjct: 59 PDDPFNERHG-RKHKLDDEPADDTAADAAEDSGNPKKKGANTKKQQPVAK-----YGAEA 112
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHHGQACEKLDCPSKFLI 180
K KA+ + + G E G+ +R PSKFL+
Sbjct: 113 KSKAVRERET---------GAEVVRGDFDR------------------------PSKFLV 139
Query: 181 LCLNAIENAMRHDGVEQDNPLF-VNSWGIEFWKCYSS--AKDILETSGSSSTIVQIAWIV 237
+CLNAI +A+ + E + WG+E W+C S+ D+L+ SG+ +T+ Q AW+V
Sbjct: 140 VCLNAIRDAVAPE--EGGGSIHGAGDWGVELWRCCSAQAPSDVLDASGACATVAQTAWLV 197
Query: 238 ATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDH 297
+TA D +ARKE+ G + PFLL+LVSSQ+KAA+VRS+CKPLK GIH+VSLHPGA+I+H
Sbjct: 198 STACDIVARKERHGMVVSCPFLLYLVSSQDKAAQVRSICKPLKPLGIHSVSLHPGASIEH 257
Query: 298 QITG 301
QI+G
Sbjct: 258 QISG 261
>gi|168006735|ref|XP_001756064.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692574|gb|EDQ78930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 275/581 (47%), Gaps = 61/581 (10%)
Query: 1 MTKGDDAVMRRRNKAKIKKLNNKNTSSNVSARVAAVIAAKKRRKSGKRRQCQGMCFSLPT 60
M KGDDA+ +++NKA K+ N+ +N + + V + K+RRK+G RR C+ MC+SLPT
Sbjct: 1 MAKGDDALAKKKNKAIRKR--NRRAGANTTEAIEGVQSHKRRRKAGTRRVCESMCYSLPT 58
Query: 61 LDDPFNDRYDKRETETKATKKRNSLQLDKNKNAFVKGKSAVSKKETKRDNNEKPGHLEQT 120
DDPF DR R KN ++F SA K E +R + E+ E++
Sbjct: 59 PDDPFLDRKIHR----------------KNHDSFQTNGSANWKVEERRSDTER--KHEKS 100
Query: 121 KEKAINLKNSQDKSLLFIDGVEKRTGNVERAEVHLNGKSCANGHH---GQACEKLDCPSK 177
E ++ K EK N R E +N + A C++ K
Sbjct: 101 TENVMSRSTDVVKP-------EKVQANGSRKE-DINKFTSAPLKKVVWDPNCDRKSSEPK 152
Query: 178 FLI---LCL--NAIENAM------RHDGVEQDNPLFVNSWGIE--FWKCYSSAKDILETS 224
I LC NA + A+ R+ P + E +W+ + D+L T
Sbjct: 153 AGISDALCTANNAFQLAVSALFEDRYSEGSSSKPRAAAATNFEQQWWQACAQGVDVLGTG 212
Query: 225 GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLK-AFG 283
+ I A+ V A +K+ G + GPF L LV S+++A VR +CK LK
Sbjct: 213 CGTPCIK--AYTVGAAPHVAVQKKVSGLA-QGPFALILVKSKDQAQSVRQICKLLKKVLN 269
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL- 342
IHTVSLH +I+ Q+ GL P +V+TP+RL +L++L +S VS +VVD LD L
Sbjct: 270 IHTVSLHSEKSIELQVNGLAMQTPGIVVATPDRLCQLLTLSVFSLSSVSYVVVDSLDDLI 329
Query: 343 SKG--DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACI 400
++G + L I+Q + V + + V A N L + R L+++V + SACI
Sbjct: 330 NEGYREQLDNIKQQLQKGVQVGVISKTFSADVVSAAGNWLQHPVARAVLDKNVPASSACI 389
Query: 401 IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI 460
+QSV+V ++E K+ K ++L+ + + L + I+ K S+ +
Sbjct: 390 LQSVSVTTTEESKLTKFNKILEQIRKNLEDNHILGSVLILIKGSE--------QFPVLKE 441
Query: 461 STGSNCIVSHIKNSVEADGRKRPAVSMIDK--DHISTAELEEYEVVIVPDFIISMKNYVE 518
+ + H N RK+ M+ K D I + L + EV I DF + +Y +
Sbjct: 442 LLLKHKLTPHFINESAGVPRKQKRSIMVAKFDDKIEPSVLSKVEVAINYDFSWPIHHYTQ 501
Query: 519 ILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
ILT MAR +V G + + + A HA ++EILE CGQ VP
Sbjct: 502 ILTGMARSSVKGRIETLCSGAAALHADSLVEILETCGQSVP 542
>gi|414587749|tpg|DAA38320.1| TPA: hypothetical protein ZEAMMB73_360846 [Zea mays]
Length = 376
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 114/148 (77%), Gaps = 5/148 (3%)
Query: 176 SKFLILCLNAIENAMRHDGVEQDNPLF-VNSWGIEFWKCYSS--AKDILETSGSSSTIVQ 232
SKFL++CLNAI +A+ + E N + WG+EFW+C S+ + D+L+ SG+ +T+ Q
Sbjct: 229 SKFLVVCLNAIRDAVAPE--EGGNSIHGTGDWGVEFWRCCSAQASSDVLDASGACATVTQ 286
Query: 233 IAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPG 292
AW+V+TA D IARKE+ G + PFLL+LVSSQ+KAA+VRS+CKPLK GIH+VSLHPG
Sbjct: 287 TAWLVSTACDIIARKERHGMVVSCPFLLYLVSSQDKAAQVRSICKPLKPLGIHSVSLHPG 346
Query: 293 AAIDHQITGLRSCEPEFLVSTPERLLKL 320
A+I+HQI+GL +CEPEFL++TPE L L
Sbjct: 347 ASIEHQISGLETCEPEFLIATPESFLIL 374
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 93/107 (86%)
Query: 224 SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG 283
S S+T+ Q AW+V+TA D IARKE+ G + PFLL+LVSSQ+KAA+VRS+CKPLK G
Sbjct: 61 SWWSATVTQTAWLVSTACDIIARKERHGMVVSCPFLLYLVSSQDKAAQVRSICKPLKPLG 120
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSG 330
IH+VSLHPGA+I+HQI+GL++CEPEFL++TPERLL LVSLKAID+SG
Sbjct: 121 IHSVSLHPGASIEHQISGLKTCEPEFLIATPERLLNLVSLKAIDISG 167
>gi|147820970|emb|CAN74595.1| hypothetical protein VITISV_003477 [Vitis vinifera]
Length = 823
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 110/134 (82%), Gaps = 3/134 (2%)
Query: 167 QACEKLDCPSKFLILCLNAIENAMRHDGV---EQDNPLFVNSWGIEFWKCYSSAKDILET 223
Q+CE DCPSKFLILCL +I++A++ D + ++D PLFVN WG+EFWKCYSS D+LET
Sbjct: 482 QSCENSDCPSKFLILCLKSIQSALQQDVIFNFKEDKPLFVNEWGVEFWKCYSSGIDVLET 541
Query: 224 SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG 283
SG+ ST+ +IAW+++TAAD+IARKEKEG TG FLLFLV SQE+AAK R+VCKPLKA
Sbjct: 542 SGACSTLERIAWMISTAADTIARKEKEGIFLTGLFLLFLVPSQEEAAKARAVCKPLKALR 601
Query: 284 IHTVSLHPGAAIDH 297
IHT+SLH GA++D
Sbjct: 602 IHTMSLHHGASLDQ 615
>gi|147782354|emb|CAN61306.1| hypothetical protein VITISV_035680 [Vitis vinifera]
Length = 244
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 3/111 (2%)
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL---IRQS 354
I L+S EPEFLV+TPERLL+L+SLKAID+SGVSLLVVD LD+L KG L + IRQS
Sbjct: 133 HIHRLKSREPEFLVATPERLLELISLKAIDISGVSLLVVDGLDTLCKGGYLDMIKSIRQS 192
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN 405
IS PH VVF++ + TSVP V++LL GS RL L S+ +QSACI QS++
Sbjct: 193 ISRNPHAVVFSERSSCTSVPGVEDLLRGSYCRLPLKGSINNQSACIAQSIH 243
>gi|296090407|emb|CBI40226.3| unnamed protein product [Vitis vinifera]
Length = 130
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 83/107 (77%), Gaps = 3/107 (2%)
Query: 302 LRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL---IRQSISGK 358
L+S EPEFLV+TPERLL+L+SLKAID+SGVSLLVVD LD+L KG L + IRQSIS
Sbjct: 23 LKSREPEFLVATPERLLELISLKAIDISGVSLLVVDGLDTLCKGGYLDMIKSIRQSISRN 82
Query: 359 PHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN 405
PH VVF++ + TSVP V++LL GS RL L S+ +QSACI QS++
Sbjct: 83 PHAVVFSERSSCTSVPGVEDLLRGSYCRLPLKGSINNQSACIAQSIH 129
>gi|224100685|ref|XP_002311973.1| predicted protein [Populus trichocarpa]
gi|222851793|gb|EEE89340.1| predicted protein [Populus trichocarpa]
Length = 122
Score = 101 bits (251), Expect = 1e-18, Method: Composition-based stats.
Identities = 63/158 (39%), Positives = 81/158 (51%), Gaps = 39/158 (24%)
Query: 416 KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSV 475
+GIQVL+HA S+PLK Y K++ G G++
Sbjct: 3 QGIQVLNHACDSQLASQPLKPGYECQKETS-----------GLRDQCGAH---------- 41
Query: 476 EADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
T +L YE VI P+F+ S+ NYV+ LT MARHT++G+ HSF
Sbjct: 42 ------------------PTTDLAFYETVIFPNFVQSIDNYVQTLTRMARHTINGVSHSF 83
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTSPMLE 573
T +DA AG I+ILEQCGQ VPDALR+L TS MLE
Sbjct: 84 LTTEDAPIAGPRIKILEQCGQAVPDALRNLHLTSSMLE 121
>gi|414589495|tpg|DAA40066.1| TPA: hypothetical protein ZEAMMB73_834377 [Zea mays]
Length = 277
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 29/129 (22%)
Query: 204 NSWGIEFWKCYSS--AKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261
++WG+E W+C S+ + D+L + +T++Q W+V+ D+++RKEK + PFLL+
Sbjct: 22 DNWGMELWRCCSAQASSDVLNAIDTCATVLQTVWLVSKTCDNVSRKEKHEMIVSCPFLLY 81
Query: 262 LVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV 321
LVSSQ+KA QI GL++CE EFL++T +RLL LV
Sbjct: 82 LVSSQDKAV---------------------------QIFGLKTCEREFLIATTKRLLNLV 114
Query: 322 SLKAIDVSG 330
SLKAID+SG
Sbjct: 115 SLKAIDISG 123
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 204 NSWGIEFWKCYSS--AKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLF 261
++WG+E W+C S+ + D+L + +T++Q W+V+ D+++RKEK + PFLL+
Sbjct: 193 DNWGMELWRCCSAQASSDVLNAIDTCATVLQTVWLVSKTCDNVSRKEKHEMIVSCPFLLY 252
Query: 262 LVSSQEKAAKVRSVCKPLKAF 282
L+SSQ+KA +VRS+ KPLK
Sbjct: 253 LISSQDKAVQVRSISKPLKPL 273
>gi|19173435|ref|NP_597238.1| P68-LIKE PROTEIN (DEAD BOX FAMILY OF RNA HELICASES)
[Encephalitozoon cuniculi GB-M1]
gi|74664187|sp|Q8SRB2.1|DBP2_ENCCU RecName: Full=ATP-dependent RNA helicase DBP2
gi|19171024|emb|CAD26414.1| P68-LIKE PROTEIN (DEAD BOX FAMILY OF RNA HELICASES)
[Encephalitozoon cuniculi GB-M1]
gi|449328762|gb|AGE95038.1| p68-like protein [Encephalitozoon cuniculi]
Length = 495
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 163/371 (43%), Gaps = 31/371 (8%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + A D + +G P +L L ++E
Sbjct: 118 WPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDG-----PIVLVLAPTREL 172
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
+++ V F + + +++ GA+ QI L E +++TP RL+ L
Sbjct: 173 VMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGA-EVVIATPGRLIDLHDQGHAP 231
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV--PAVQNLLLGSIN 385
+S V+ LV+D D + +R+ I P T L +++ V+ L +N
Sbjct: 232 LSRVTFLVLDEADRMLDMGFEPQLRKII---PKTNANRQTLMWSATWPREVRGLAESYMN 288
Query: 386 R----LSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
+ N+ + + S I Q V VC S EK K I VLD+ GD KV+
Sbjct: 289 EYIQVVVGNEELKTNSK-IKQIVEVC-SGREKEDKLIGVLDNFKGD-------KVIVFCN 339
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR--KRPAVSMIDKDHISTAELE 499
+L L GY + +I++ V D R +RP + + + ++
Sbjct: 340 MKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRP-ILIATEVAGRGLDVN 398
Query: 500 EYEVVIVPDFIISMKNYVEILTSMAR-HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
+ ++VI DF S ++YV + AR +T GI H+FFT D A+A ++I +L + Q V
Sbjct: 399 DVKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTFFTVGDKANARELIRMLREANQTV 458
Query: 559 PDALRDLCHTS 569
P L D+ S
Sbjct: 459 PSDLEDMVRVS 469
>gi|303390338|ref|XP_003073400.1| DEAD box RNA helicase-like protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302546|gb|ADM12040.1| DEAD box RNA helicase-like protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 493
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 162/368 (44%), Gaps = 25/368 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + A D + +G P L L ++E
Sbjct: 118 WPMALSGRDMVGIAQTGSGKTLSFILPGLVHAKDQQPLRRGDG-----PIALVLAPTREL 172
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
+++ V FG+ + +++ GA+ QI L E +++TP RL+ L
Sbjct: 173 VMQIKKVADEFCGMFGLRSTAVYGGASSQPQIKALHEGV-EIVIATPGRLIDLHEQGHAP 231
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSI---SGKPHTVVFNDCLTYTSVPAVQNLLLGSI 384
+S V+ LV+D D + +R+ I +G T++++ ++ + I
Sbjct: 232 LSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNGNRQTLMWSATWPREVRGLAESYMNDYI 291
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
+ N+ + + S I Q + VC S EK K + VLD GD KV+
Sbjct: 292 QVVVGNEELKTNSK-IKQVIEVC-SGREKEDKLLGVLDKFKGD-------KVIVFCNMKR 342
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR--KRPAVSMIDKDHISTAELEEYE 502
+L L GY + +I++ V D R +RP + + + ++ + +
Sbjct: 343 TCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRP-ILIATEVAGRGLDVNDVK 401
Query: 503 VVIVPDFIISMKNYVEILTSMAR-HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+VI DF + ++YV + AR +T GI H+FFT +D +A ++I +L + Q VP
Sbjct: 402 LVINFDFPGTCEDYVHRIGRTARGNTKEGISHTFFTINDKGNARELIRMLREANQTVPSD 461
Query: 562 LRDLCHTS 569
L D+ S
Sbjct: 462 LEDMVRVS 469
>gi|401827392|ref|XP_003887788.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998795|gb|AFM98807.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 493
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 167/385 (43%), Gaps = 30/385 (7%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G E P+ W + S +D+ + +GS T+ I + A D + +G
Sbjct: 106 GFEGPTPIQAQGWPMAL-----SGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDG 160
Query: 252 FSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFL 310
P +L L ++E +++ V F + + +++ GA+ QI L E +
Sbjct: 161 -----PIVLVLAPTRELVMQIKKVADEFCGMFNLRSTAVYGGASSQPQIRALHEGA-EVV 214
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI---SGKPHTVVFNDC 367
++TP RL+ L + V+ LV+D D + +R+ I +G T++++
Sbjct: 215 IATPGRLIDLHDQGHAPLGRVTFLVLDEADRMLDMGFEPQLRKIIPKTNGSRQTLMWSAT 274
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
++ + I + N+ + + S I Q + VC S EK K + VLD GD
Sbjct: 275 WPREVRGLAESYMSDYIQVVIGNEELKTNSK-IKQVIEVC-SGREKEDKLLGVLDKFKGD 332
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR--KRPAV 485
KV+ +L L GY + +I++ V D R +RP +
Sbjct: 333 -------KVIVFCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVLDDFRSGRRP-I 384
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMAR-HTVSGILHSFFTKDDAAHA 544
+ + ++ + ++VI DF + ++YV + AR +T GI H+FFT +D +A
Sbjct: 385 LIATEVAGRGLDVNDIKLVINFDFPGTCEDYVHRIGRTARGNTKEGISHTFFTINDKGNA 444
Query: 545 GQMIEILEQCGQVVPDALRDLCHTS 569
++I +L + QVVP L D+ S
Sbjct: 445 RELIRMLREAKQVVPSDLEDMVRPS 469
>gi|346473033|gb|AEO36361.1| hypothetical protein [Amblyomma maculatum]
Length = 523
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 187/433 (43%), Gaps = 36/433 (8%)
Query: 147 NVERAEVHLNGKSCANGHHGQACEKLD-CPSKFLILCLNAIENAMRHDGVEQDNPLFVNS 205
N RAE + + G + LD C F + C E + Q +P+ +
Sbjct: 74 NAFRAEHEITVQGHGQGRVPKPVLTLDEC--NFPVQCRALFER----KNITQPSPIQAQA 127
Query: 206 WGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLV 263
W I S +D+ + +GS T+ V +A I+R+++ S GP + L
Sbjct: 128 WPIVM-----SGRDLVGIAQTGSGKTLA----YVLPSAIHISRQQRPSRSGEGPIGVVLA 178
Query: 264 SSQEKAAKVRSVCKPL--KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV 321
++E ++ V AF + ++ G + QI L+ V+TP RLL ++
Sbjct: 179 PTRELVQQISQVAYEWCEGAFDLTGTPVYGGVSKAPQIERLQRGA-HMCVATPGRLLDIL 237
Query: 322 SLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYTSVPAVQN 378
A+++ + LV+D D + IR+ I +P TV+++ Q
Sbjct: 238 ETGAVNLLRCTFLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTVMWSATWPNEVRSLAQE 297
Query: 379 LLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYGDHFHSEPLKV 436
L+ ++++ + + I Q +++C E K+L +Q + A G+ +
Sbjct: 298 FLVPDHMQVTVGSADLCANHNIKQVIHICDEFEKEHKLLNVLQDI-MAEGEQ------RT 350
Query: 437 LYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA 496
L + S+ +L+ TL+ KG+ + ++ +S K V D + A S++ ++
Sbjct: 351 LIFAARKSRVVHLLQTLQKKGFR-AVATHGDLSQSKRDVALDRFRSGATSIMVATDVAAR 409
Query: 497 ELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQC 554
L+ + + V+ D+ + ++YV + R G +FFT D+AA A Q+I +L++
Sbjct: 410 GLDVTDIKYVVNYDYPDTSESYVHRIGRTGRRDQEGTAITFFTPDNAAQAKQLIAVLQEA 469
Query: 555 GQVVPDALRDLCH 567
Q VP L L +
Sbjct: 470 DQEVPQELWQLVN 482
>gi|396081911|gb|AFN83525.1| DEAD box RNA helicase-like protein [Encephalitozoon romaleae
SJ-2008]
Length = 493
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 173/396 (43%), Gaps = 37/396 (9%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
+E+ +R G E P+ W + S +D+ + +GS T+ I + A D
Sbjct: 99 VEDLVRK-GFEGPTPIQAQGWPMAL-----SGRDMVGIAQTGSGKTLSFILPALVHAKDQ 152
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL 302
+ +G P +L L ++E +++ V + F + + +++ GA+ QI L
Sbjct: 153 PPLRRGDG-----PIVLVLAPTRELVMQIKKVADEFCEMFDLRSTAVYGGASSQPQIRAL 207
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTV 362
E +++TP RL+ L + V+ LV+D D + +R+ I P T
Sbjct: 208 HEGA-EVVIATPGRLIDLHEQGHAPLGRVTFLVLDEADRMLDMGFEPQLRKII---PKTN 263
Query: 363 VFNDCLTYTSV--PAVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVC-ASDEEKILK 416
L +++ V+ L +N ++ + ++ I Q + VC D+E L
Sbjct: 264 PNRQTLMWSATWPKEVRGLAESYMNDYIQVVIGNEELKTNSKIKQVIEVCNGRDKEDKLL 323
Query: 417 GIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
G VLD GD +++ +L L GY + +I++ V
Sbjct: 324 G--VLDKFKGD-------RIIVFCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVL 374
Query: 477 ADGR--KRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMAR-HTVSGILH 533
D R +RP + + + ++ + ++VI DF S ++YV + AR +T GI H
Sbjct: 375 DDFRSGRRP-ILIATEVAGRGLDVNDIKLVINFDFPGSCEDYVHRIGRTARGNTKEGISH 433
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+FFT +D +A ++I +L++ QVVP L D+ S
Sbjct: 434 TFFTINDKGNARELIRMLKEAKQVVPSDLEDMVRAS 469
>gi|281209475|gb|EFA83643.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 665
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 211 WKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W C + D+L S GS T + ++ D I + E P +L LV ++E
Sbjct: 253 WPCVLTGHDVLGISLPGSGKTAGFLLPMIPHCQDRI---KNETIIPNSPSILILVPTREL 309
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ S+ L K FGIH++ ++ G A + QI L+ P L++TP RL+ L+ + ++
Sbjct: 310 ARQIYSISSKLRKHFGIHSLPIYGGVAKEPQIQSLQGGIPHILIATPGRLVDLIDMGVLN 369
Query: 328 VSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVF 364
++GV++LVVD D LS G D L I+ I T+ F
Sbjct: 370 LNGVTMLVVDEADKMLSMGLIDQLEQIKSQIRPDVQTLFF 409
>gi|427789303|gb|JAA60103.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 521
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 167/384 (43%), Gaps = 31/384 (8%)
Query: 195 VEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGF 252
+ Q +P+ +W I S +D+ + +GS T+ A+++ A ++ G
Sbjct: 117 ITQPSPIQAQAWPIVM-----SGRDLVGIAQTGSGKTL---AYVLPAAIHMSHQQRPRG- 167
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKPL--KAFGIHTVSLHPGAAIDHQITGLRSCEPEFL 310
GP + L ++E ++ V AFG+ ++ G + QI LR
Sbjct: 168 --EGPISVVLAPTRELVQQISQVAYEWCEGAFGLSGTPVYGGVSKGPQIERLRRGV-HMC 224
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDC 367
V+TP RLL ++ A+++ + LV+D D + IR+ I +P TV+++
Sbjct: 225 VATPGRLLDILETGAVNLLRCTFLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTVMWSAT 284
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAY 425
Q L+ ++++ + + I Q V+VC E K+L +Q
Sbjct: 285 WPAEVRSLAQEFLIPDHMQVTVGSTELCANHNIKQVVHVCDEFEKENKLLGILQ------ 338
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
D + L V + S +L+ L+ KG+ + ++ +S K + D + A
Sbjct: 339 -DIMEEGEQRTLIFVARKSSVVHLLQKLQSKGFR-AVATHGDLSQSKRDIALDRFRSGAT 396
Query: 486 SMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ +V VI D+ + + YV + R G + FT D+AA
Sbjct: 397 PIMVATDVAARGLDVSDVKYVINYDYPDTSEGYVHRIGRTGRSDREGTSITLFTPDNAAQ 456
Query: 544 AGQMIEILEQCGQVVPDALRDLCH 567
A Q+I +L++ GQ VP+ L+ L +
Sbjct: 457 AKQLIAVLQEAGQDVPEELQQLVN 480
>gi|115471651|ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group]
gi|75325214|sp|Q6YS30.1|RH5_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 5
gi|34394349|dbj|BAC84904.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113610960|dbj|BAF21338.1| Os07g0301200 [Oryza sativa Japonica Group]
Length = 512
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 43/387 (11%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G E+ +P+ +W +D + +GS TI A + RK E
Sbjct: 111 GFERPSPIQAYAWPYLL-----DGRDFIGIAATGSGKTIA----FGVPALMHVRRKMGEK 161
Query: 252 FSFTG-PFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEF 309
+ G P +L L ++E A ++ V C+ GI +V L+ G + QI+ L+S +
Sbjct: 162 SAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGV-DI 220
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFN 365
++ TP R+ L+ + ++ VS +V+D D + + + +++ Q+ S + TV+F
Sbjct: 221 VIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVR-QTVMF- 278
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-- 423
+ T PAV L ++ + +I S ++ A+ + +++ ++VLD
Sbjct: 279 ---SATWPPAVHQLAQEFMDPNPIK--------VVIGSEDLAANHD--VMQIVEVLDDRS 325
Query: 424 ------AYGDHFH-SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
A D +H ++ +VL V + + + L+ +G+S + H +
Sbjct: 326 RDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKAL 385
Query: 477 ADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ ++ MI D S ++ + EVVI + ++ ++YV + R G+ H+F
Sbjct: 386 SLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTF 445
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDAL 562
FT+++ AG+++ +L + GQVVP AL
Sbjct: 446 FTQENKGLAGELVNVLREAGQVVPPAL 472
>gi|32352202|dbj|BAC78594.1| RNA helicase [Oryza sativa Japonica Group]
Length = 408
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 43/387 (11%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G E+ +P+ +W +D + +GS TI A + RK E
Sbjct: 7 GFERPSPIQAYAWPYLL-----DGRDFIGIAATGSGKTIA----FGVPALMHVRRKMGEK 57
Query: 252 FSFTG-PFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEF 309
+ G P +L L ++E A ++ V C+ GI +V L+ G + QI+ L+S +
Sbjct: 58 SAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGV-DI 116
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFN 365
++ TP R+ L+ + ++ VS +V+D D + + + +++ Q+ S + TV+F
Sbjct: 117 VIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVR-QTVMF- 174
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-- 423
+ T PAV L ++ + +I S ++ A+ + +++ ++VLD
Sbjct: 175 ---SATWPPAVHQLAQEFMDPNPIK--------VVIGSEDLAANHD--VMQIVEVLDDRS 221
Query: 424 ------AYGDHFH-SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
A D +H ++ +VL V + + + L+ +G+S + H +
Sbjct: 222 RDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKAL 281
Query: 477 ADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ ++ MI D S ++ + EVVI + ++ ++YV + R G+ H+F
Sbjct: 282 SLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTF 341
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDAL 562
FT+++ AG+++ +L + GQVVP AL
Sbjct: 342 FTQENKGLAGELVNVLREAGQVVPPAL 368
>gi|330795215|ref|XP_003285670.1| hypothetical protein DICPUDRAFT_149527 [Dictyostelium purpureum]
gi|325084396|gb|EGC37825.1| hypothetical protein DICPUDRAFT_149527 [Dictyostelium purpureum]
Length = 757
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 53/343 (15%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L +V ++E A +V S CKPL++ F IH+V+++ G Q L E +++TP
Sbjct: 364 GPLVLIIVPTRELAQQVESSCKPLRSKFNIHSVAIYGGVEAQQQKEILSQEHNEIVIATP 423
Query: 315 ERLLKLVSLKAIDV----SGVSLLV---VDRLDSLSKGDTLSLIRQSISGKPHTVVFNDC 367
RL+ L+ ++ D+ GV +LV DR+ L GD L I + I T++F+
Sbjct: 424 GRLVDLIQ-RSEDIVGLLGGVGMLVFDEADRMLQLGFGDQLQKISEQIRPDRQTLMFSAT 482
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ A + L + ++ + S A+Q + I S NV ++++K I LD
Sbjct: 483 FPHAMQEAAKKWLNNPL-KIRVKSSSANQESSAIVSKNV-----KQVVKPIVDLDRP--- 533
Query: 428 HFHSEPLKVLYIVGKDSKFQN------LVSTLK------------CKGYSISTGS----N 465
+ + LK I+ K+ +N V+T+K C Y TG +
Sbjct: 534 QYLTNFLK--SIMDKELNLRNRSLILVFVNTIKQAMPVLNIIDKLCVSY---TGRKYKCS 588
Query: 466 CIVSHIK----NSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEIL 520
CI +K ++V D + ++ D + + VI DF S++ Y+ +
Sbjct: 589 CIHGDMKQIERDAVINDFKSGKLTIIVATDILGRGIHINNLRFVINYDFPTSLEQYIHRV 648
Query: 521 TSMARHTVSGILHSFFTK--DDAAHAGQMIEILEQC-GQVVPD 560
R G + FT+ + A +I+ILE+C QV PD
Sbjct: 649 GRTGRQGNKGHALTLFTETVQNVPMARGLIKILEECKQQVSPD 691
>gi|242012227|ref|XP_002426835.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212511048|gb|EEB14097.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 678
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 160/387 (41%), Gaps = 22/387 (5%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
I N +R G P+ W I S KDI + +GS TI + + +
Sbjct: 138 IMNVIRKQGFTVPTPIQAQGWPIAL-----SGKDIVGIAKTGSGKTIAYMLPAIVHIHNQ 192
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL 302
+ +G P L L ++E A +++SV +A I + GA Q L
Sbjct: 193 PPLELNDG-----PIALILAPTRELAQQIQSVANDFGEATRIRNSCIFGGAPKGPQFRDL 247
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHT 361
S E +++TP RL+ + ++ + LV+D D + IR+ + +P
Sbjct: 248 ESGV-EIVIATPGRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDR 306
Query: 362 VVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQV 420
V T+ V A+ L +L++ S + I+Q V+VC E++ ++
Sbjct: 307 QVLMWSATWPKEVRALAEDYLTDYIQLNIGSLQLSANHNILQIVDVCQEHEKE--NKLRQ 364
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
L H G + K + V K N+ L+ G+ + ++ V R
Sbjct: 365 LLHEIGSEKEN---KTIIFVETKRKVDNITQILRKDGWPALSIHGDKNQQERDHVLTQFR 421
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
A ++ D + ++E+ + VI+ D+ S+++Y+ + R +G ++FFT
Sbjct: 422 NGRASILVATDVAARGLDVEDVKFVIIFDYPSSLEDYIHRIGRTGRSEQTGTAYAFFTPH 481
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLC 566
+ HA +I +LE+ Q+V L ++
Sbjct: 482 NVKHANALINVLEEADQIVNPKLVEMA 508
>gi|218188023|gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indica Group]
Length = 512
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G E+ +P+ +W +D + +GS TI A + RK E
Sbjct: 111 GFERPSPIQAYAWPYLL-----DGRDFIGIAATGSGKTIA----FGVPALMHVRRKMGEK 161
Query: 252 FSFTG-PFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEF 309
+ G P +L L ++E A ++ V C+ GI +V L+ G + QI+ L+S +
Sbjct: 162 SAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGV-DI 220
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFN 365
++ TP R+ L+ + ++ VS +V+D D + + + +++ Q+ S + V+F
Sbjct: 221 VIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVR-QMVMF- 278
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-- 423
+ T PAV L ++ + +I S ++ A+ + +++ ++VLD
Sbjct: 279 ---SATWPPAVHQLAQEFMDPNPIK--------VVIGSEDLAANHD--VMQIVEVLDDRS 325
Query: 424 ------AYGDHFH-SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
A D +H ++ +VL V + + + L+ +G+S + H +
Sbjct: 326 RDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKAL 385
Query: 477 ADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ ++ MI D S ++ + EVVI + ++ ++YV + R G+ H+F
Sbjct: 386 SLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTF 445
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDAL 562
FT+++ AG+++ +L + GQVVP AL
Sbjct: 446 FTQENKGLAGELVNVLREAGQVVPPAL 472
>gi|195565659|ref|XP_002106416.1| GD16140 [Drosophila simulans]
gi|194203792|gb|EDX17368.1| GD16140 [Drosophila simulans]
Length = 800
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 164/380 (43%), Gaps = 38/380 (10%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS--IARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ + + + I R E GP L L ++
Sbjct: 269 WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGE-------GPIALVLAPTR 321
Query: 267 EKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTPERLL 318
E A +++SV CKP I + G++ Q L R E +++TP RL+
Sbjct: 322 ELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLDRGVE--VIIATPGRLI 375
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAV 376
+ + ++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 376 DFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQAL 435
Query: 377 QNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK-----ILKGIQVLDHAYGDHFHS 431
L ++++ S + I Q V +C E+ +L I + ++ S
Sbjct: 436 AGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNS-----GS 490
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K++ V K ++++ ++ +GY+ ++ + ++SV D R + +I D
Sbjct: 491 NGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATD 550
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S +NYV + R G ++FFT D+A A ++I +
Sbjct: 551 VASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISV 610
Query: 551 LEQCGQVVPDALRDLCHTSP 570
LE+ GQ AL DL + P
Sbjct: 611 LEEAGQTPSQALLDLARSMP 630
>gi|255555929|ref|XP_002519000.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223541987|gb|EEF43533.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 534
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 170/378 (44%), Gaps = 54/378 (14%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W +D + +GS T+ A+ + +++++ + P L L ++E
Sbjct: 145 WPFLLDGRDFIGIAKTGSGKTL---AYGIPAVMHVLSKRKGASANSVNPLCLVLAPTREL 201
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ V + + G+ +V L+ G + QI+ L+S + +++TP RL L+ +
Sbjct: 202 ADQISVVLRDAGEPCGVRSVCLYGGTSKGPQISSLKSG-VDIVIATPGRLKDLIEMNICH 260
Query: 328 VSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS 383
+ VS LV+D D + + + S++ ++ S + ++F + T V NL
Sbjct: 261 LMEVSFLVLDEADRMLDMGFRQEVRSILSKTCSAR-QMIMF----SATWPLDVHNLAEEY 315
Query: 384 INRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD 443
++R + V S+ + +++ ++VLD DH + ++L ++ K
Sbjct: 316 MDRNPIKVVVGSEDT----------AANHDVMQIVEVLD----DHLRDK--RLLALLEKY 359
Query: 444 SKFQN---LVSTL------KCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH-- 492
K Q LV L + G +G N + H + E ++ A+S+ K
Sbjct: 360 HKTQRNRVLVFALYQKEAERLDGMLHRSGWNVVSIHGNKAQE---QRTKALSLFKKGSCP 416
Query: 493 --IST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++T ++ + EVVI F ++ ++YV + R G+ H+FFT + A
Sbjct: 417 LMVATDVAARGLDVPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTHHNKGLA 476
Query: 545 GQMIEILEQCGQVVPDAL 562
G+++ +L + GQVVPDAL
Sbjct: 477 GELVNVLREAGQVVPDAL 494
>gi|194897089|ref|XP_001978588.1| GG17597 [Drosophila erecta]
gi|190650237|gb|EDV47515.1| GG17597 [Drosophila erecta]
Length = 955
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 172/387 (44%), Gaps = 33/387 (8%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + + + I R E
Sbjct: 264 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGE------- 313
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEP 307
GP L L ++E A +++SV CKP I + G++ Q L R E
Sbjct: 314 GPIALVLAPTRELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLDRGVE- 368
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFND 366
+++TP RL+ + + ++ + LV+D D + IR+ I +P V
Sbjct: 369 -VIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMW 427
Query: 367 CLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-A 424
T+ V A+ L ++++ S + I Q V +C ++ EK + +++L+ A
Sbjct: 428 SATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEIC-TEMEKPQRLVRLLNEIA 486
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ + K++ V K ++++ ++ +GY+ ++ + ++SV D R +
Sbjct: 487 PTKNSANNGNKIIIFVETKIKVEDILQIIRTEGYTATSIHGDKTQNERDSVLKDFRNGKS 546
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
+I D S ++E+ + VI D+ S +NYV + R G ++FFT D+A
Sbjct: 547 NILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQ 606
Query: 544 AGQMIEILEQCGQVVPDALRDLCHTSP 570
A ++I +LE+ GQ AL DL + P
Sbjct: 607 ARELISVLEEAGQTPSQALLDLARSMP 633
>gi|195480298|ref|XP_002101215.1| GE17497 [Drosophila yakuba]
gi|194188739|gb|EDX02323.1| GE17497 [Drosophila yakuba]
Length = 962
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 172/387 (44%), Gaps = 33/387 (8%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + + + I R E
Sbjct: 262 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPILRGE------- 311
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEP 307
GP L L ++E A +++SV CKP I + G++ Q L R E
Sbjct: 312 GPIALVLAPTRELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLDRGVE- 366
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFND 366
+++TP RL+ + + ++ + LV+D D + IR+ I +P V
Sbjct: 367 -VIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMW 425
Query: 367 CLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-A 424
T+ V A+ L ++++ S + I Q V +C ++ EK + +++L+ A
Sbjct: 426 SATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEIC-TEMEKPQRLVRLLNEIA 484
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ + K++ V K ++++ ++ +GY+ ++ + ++SV D R +
Sbjct: 485 PTKNSANNGNKIIIFVETKIKVEDILQIIRTEGYTATSIHGDKTQNERDSVLKDFRNGKS 544
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
+I D S ++E+ + VI D+ S +NYV + R G ++FFT D+A
Sbjct: 545 NILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQ 604
Query: 544 AGQMIEILEQCGQVVPDALRDLCHTSP 570
A ++I +LE+ GQ AL DL + P
Sbjct: 605 ARELISVLEEAGQTPSQALLDLARSMP 631
>gi|194763631|ref|XP_001963936.1| GF20995 [Drosophila ananassae]
gi|190618861|gb|EDV34385.1| GF20995 [Drosophila ananassae]
Length = 996
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 170/387 (43%), Gaps = 32/387 (8%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + + + I R E
Sbjct: 268 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPILRGE------- 317
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPE 308
GP L L ++E A +++SV CKP I + G++ Q L E
Sbjct: 318 GPVALVLAPTRELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLERGV-E 372
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDC 367
+++TP RL+ + + ++ + LV+D D + IR+ I +P V
Sbjct: 373 VIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWS 432
Query: 368 LTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH--A 424
T+ V A+ L ++++ S + I Q V +C ++ EK + +++L
Sbjct: 433 ATWPKEVQALAGDFLNDYIQINIGSMSLSANHNIRQIVEIC-TEMEKPQRMVRLLKEIAP 491
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
++ + K++ V K ++++ ++ +GY+ ++ + ++SV D R +
Sbjct: 492 TTNNAANNGNKIIIFVETKIKVEDILQIIRTEGYTATSIHGDKTQNERDSVLKDFRNGKS 551
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
+I D S ++E+ + VI D+ S +NYV + R G ++FFT D+A
Sbjct: 552 NILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQ 611
Query: 544 AGQMIEILEQCGQVVPDALRDLCHTSP 570
A ++I +LE+ GQ AL DL + P
Sbjct: 612 ARELISVLEEAGQTPSQALLDLARSIP 638
>gi|296083374|emb|CBI23263.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 162/358 (45%), Gaps = 36/358 (10%)
Query: 221 LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSV-CKPL 279
+ +GS T+ A+ V +++++ + P L L ++E A ++ V C+
Sbjct: 251 IAATGSGKTL---AFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDVLCEAG 307
Query: 280 KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL 339
K G+ +V L+ G + QI+ L+S + ++ TP RL L+ + ++ VS +V+D
Sbjct: 308 KHCGVKSVCLYGGTSKGPQISSLKS-GVDIVIGTPGRLKDLIEMGVCCLTEVSFVVLDEA 366
Query: 340 DSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSV-----A 394
D + +R +S + PA Q ++ + L ++Q
Sbjct: 367 DRMLDMGFEPEVRSILS--------------QTCPARQMVMFSATWPLPVHQLAQEFMDP 412
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDH---------AYGDHFHSEPLKVLYIVGKDSK 445
+ +I S ++ A+ + +++ ++VLD G + S+ +VL V +
Sbjct: 413 NPVKVVIGSEDLAANHD--VMQIVEVLDDRSRDERLLTLLGKYHKSQRNRVLVFVLYKKE 470
Query: 446 FQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVV 504
+ + L+ +G+++ + + + + +K MI D + ++ + EVV
Sbjct: 471 AARVENMLQRRGWNVVSIHGDKAQQARTAALSLFKKGSCPLMIATDVAARGLDIPDVEVV 530
Query: 505 IVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
I F ++ ++YV + R G+ H+FF +++ AG+++ +L++ GQ+VP L
Sbjct: 531 INYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLKEAGQIVPADL 588
>gi|198470572|ref|XP_001355346.2| GA10556 [Drosophila pseudoobscura pseudoobscura]
gi|198145515|gb|EAL32403.2| GA10556 [Drosophila pseudoobscura pseudoobscura]
Length = 939
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 31/386 (8%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + A + I R E
Sbjct: 261 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGKQPPILRGE------- 310
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPE 308
GP L L ++E A +++SV C+P I + G++ Q L E
Sbjct: 311 GPIALVLAPTRELAQQIQSVVRDYGHLCQPE----IRHTCIFGGSSKVPQARDLERGV-E 365
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDC 367
+++TP RL+ + + +++ + LV+D D + IR+ I +P V
Sbjct: 366 VIIATPGRLIDFLENRNTNLARCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWS 425
Query: 368 LTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-AY 425
T+ V A+ L ++++ S + I Q V +C ++ EK + +++L A
Sbjct: 426 ATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEIC-TEMEKPQRMVRLLKEIAP 484
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
++ + K++ V K ++++ ++ +GY ++ + ++SV D R +
Sbjct: 485 TNNSANNGNKIIIFVETKIKVEDILQIIRTEGYIATSIHGDKTQNERDSVLKDFRNGKSN 544
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+I D S ++E+ + VI D+ S +NYV + R G ++FFT D+A A
Sbjct: 545 ILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQA 604
Query: 545 GQMIEILEQCGQVVPDALRDLCHTSP 570
++I +LE+ GQ AL DL + P
Sbjct: 605 RELISVLEEAGQTPSQALLDLARSMP 630
>gi|357484805|ref|XP_003612690.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355514025|gb|AES95648.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 523
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 158/380 (41%), Gaps = 28/380 (7%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFS 253
G E+ +P+ +W +D++ + + S I A RK K
Sbjct: 120 GFEKPSPIQSRAWPFLL-----DGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSSK 174
Query: 254 FTGPFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
P L L ++E A ++ V C K+ G+ +V L+ G QI+ L+S + ++
Sbjct: 175 GRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKGAQISALKSG-IDIVIG 233
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS 372
TP R+ LV + + VS +V+D D + ++R SI G+ + + T
Sbjct: 234 TPGRIQDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIVR-SILGQTCSARQMVMFSATW 292
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD----- 427
AV +L ++ + V S+ S +++ ++VLD D
Sbjct: 293 PLAVHHLAQEFMDPNPVKVVVGSEDL----------SANHDVMQIVEVLDERLRDKRLLA 342
Query: 428 ----HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
+ S+ +VL V + + L+ G+ + S H + + +
Sbjct: 343 LLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGS 402
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
MI D + ++ + EVVI F +++++YV + R G+ H+FFT +
Sbjct: 403 CPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFTHLNKG 462
Query: 543 HAGQMIEILEQCGQVVPDAL 562
AG+++ +L + GQVVPD L
Sbjct: 463 LAGELVNVLREAGQVVPDDL 482
>gi|195169451|ref|XP_002025535.1| GL15249 [Drosophila persimilis]
gi|194109014|gb|EDW31057.1| GL15249 [Drosophila persimilis]
Length = 688
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 31/386 (8%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + A + I R E
Sbjct: 9 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGKQPPILRGE------- 58
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPE 308
GP L L ++E A +++SV C+P I + G++ Q L E
Sbjct: 59 GPIALVLAPTRELAQQIQSVVRDYGHLCQPE----IRHTCIFGGSSKVPQARDLERGV-E 113
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDC 367
+++TP RL+ + + +++ + LV+D D + IR+ I +P V
Sbjct: 114 VIIATPGRLIDFLENRNTNLARCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWS 173
Query: 368 LTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-AY 425
T+ V A+ L ++++ S + I Q V +C ++ EK + +++L A
Sbjct: 174 ATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEIC-TEMEKPQRMVRLLKEIAP 232
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
++ + K++ V K ++++ ++ +GY ++ + ++SV D R +
Sbjct: 233 TNNSANNGSKIIIFVETKIKVEDILQIIRTEGYIATSIHGDKTQNERDSVLKDFRNGKSN 292
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+I D S ++E+ + VI D+ S +NYV + R G ++FFT D+A A
Sbjct: 293 ILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQA 352
Query: 545 GQMIEILEQCGQVVPDALRDLCHTSP 570
++I +LE+ GQ AL DL + P
Sbjct: 353 RELISVLEEAGQTPSQALLDLARSMP 378
>gi|18857967|ref|NP_572424.1| CG10777 [Drosophila melanogaster]
gi|7290853|gb|AAF46295.1| CG10777 [Drosophila melanogaster]
gi|16648356|gb|AAL25443.1| LD32873p [Drosophila melanogaster]
gi|220947598|gb|ACL86342.1| CG10777-PB [synthetic construct]
Length = 945
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 171/391 (43%), Gaps = 41/391 (10%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + + + I R E
Sbjct: 260 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGE------- 309
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEP 307
GP L L ++E A +++SV CKP I + G++ Q L R E
Sbjct: 310 GPIALVLAPTRELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLDRGVE- 364
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFND 366
+++TP RL+ + + ++ + LV+D D + IR+ I +P V
Sbjct: 365 -VIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMW 423
Query: 367 CLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK-----ILKGIQV 420
T+ V A+ L ++++ S + I Q V +C E+ +L I
Sbjct: 424 SATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISP 483
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
+ ++ G++ + K++ V K ++++ ++ +GY+ ++ + ++SV D R
Sbjct: 484 IKNS-GNNGN----KIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFR 538
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ +I D S ++E+ + VI D+ S +NYV + R G ++FFT D
Sbjct: 539 NGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPD 598
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTSP 570
+A A ++I +LE+ GQ AL DL + P
Sbjct: 599 NAKQARELISVLEEAGQTPSQALLDLARSMP 629
>gi|281211187|gb|EFA85353.1| hypothetical protein PPL_02356 [Polysphondylium pallidum PN500]
Length = 771
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 179/424 (42%), Gaps = 55/424 (12%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILE--TSGSSSTI----VQIAWIVAT--AA 241
++H + + P+ + SW S D+L +GS T+ I I+A AA
Sbjct: 283 IKHKSIREPTPVQMQSWS-----AVLSGNDVLTIAQTGSGKTLGYLLPTIPHIMAQMRAA 337
Query: 242 DSIARKEKEGF------SFTGPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAA 294
+ + +G S GP +L +V ++E A +V SVCKPL+ FGIH+++++ G
Sbjct: 338 KNQQKTAPDGTPIESLSSVKGPIVLVIVPTRELAQQVESVCKPLRTKFGIHSLAVYGGIK 397
Query: 295 IDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSG----VSLLVVDRLDSLSK---GDT 347
Q L E +++TP RL+ L+ ++ V+G V++L+ D D + + GD
Sbjct: 398 AHEQKEILSEEHNEIVIATPGRLVDLIE-RSHQVAGLLSRVTMLIFDEADRMLQMGFGDQ 456
Query: 348 LSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQ------SACII 401
L I + I T++F+ A L + ++ + S A+Q + +
Sbjct: 457 LQKISEQIRPDRQTLMFSATFPKPMQEAAGKWLKRHL-KIRVKSSTANQENTSVITKNVK 515
Query: 402 QSVNVCASDEEK---ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNL-------VS 451
Q V + EEK LK I+ ++ + L +L V + K + L ++
Sbjct: 516 QVVTIVDKAEEKYEHFLKFIKSVNDRE-QSMRNRSL-ILVFVNQIRKVEPLQKRLEKSLA 573
Query: 452 TLKCKGYSISTGSNCIVSHIK----NSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIV 506
T K K G C+ +K + D + +I D + + +I
Sbjct: 574 TDKSKKRPTKIG--CMHGDMKQEERDQTIKDFKSGKTTVLISTDILGRGIHINNLRFIIN 631
Query: 507 PDFIISMKNYVEILTSMARHTVSGILHSFFTKD-DAAHAGQMIEILEQCGQVVPDALRDL 565
DF +S+ Y+ + R G S+F D A ++ IL++C Q V L +L
Sbjct: 632 YDFPLSLDQYIHRVGRTGRQGNKGHSVSYFDPTIDKTMATGLVNILKECDQTVKPDLIEL 691
Query: 566 CHTS 569
+S
Sbjct: 692 ASSS 695
>gi|195355988|ref|XP_002044465.1| GM11962 [Drosophila sechellia]
gi|194131630|gb|EDW53672.1| GM11962 [Drosophila sechellia]
Length = 946
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 167/391 (42%), Gaps = 41/391 (10%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + + + I R E
Sbjct: 261 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGE------- 310
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEP 307
GP L L ++E A +++SV CKP I + G++ Q L R E
Sbjct: 311 GPIALVLAPTRELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLDRGVE- 365
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFND 366
+++TP RL+ + + ++ + LV+D D + IR+ I +P V
Sbjct: 366 -VIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMW 424
Query: 367 CLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK-----ILKGIQV 420
T+ V A+ L ++++ S + I Q V +C E+ +L I
Sbjct: 425 SATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISP 484
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
+ + S K++ V K ++++ ++ +GY+ ++ + ++SV D R
Sbjct: 485 IKKS-----GSNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFR 539
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ +I D S ++E+ + VI D+ S +NYV + R G ++FFT D
Sbjct: 540 NGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPD 599
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTSP 570
+A A ++I +LE+ GQ AL DL + P
Sbjct: 600 NAKQARELISVLEEAGQTPSQALLDLARSMP 630
>gi|328868773|gb|EGG17151.1| hypothetical protein DFA_08133 [Dictyostelium fasciculatum]
Length = 640
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 38/375 (10%)
Query: 211 WKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W + +D+L S GS T+ ++ + +A+K+ + F GP +L + ++E
Sbjct: 219 WPSSLAGRDLLGISQTGSGKTL---SFGIPAIMHILAQKQVKYF---GPQVLVVAPTREL 272
Query: 269 AAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
+ ++ P LKA G+ +L+ G QI +R +P+F+V TP R+L L + +
Sbjct: 273 SVQIAQEMAPYLKACGLKFATLYGGDPKIKQIEQMR-YKPQFVVGTPGRILDLANDGYLS 331
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP-HTVVFNDCLTYTSVPAVQNLLLGSIN 385
+ S +V+D D + + IRQ S +P H +++ V A+ N + +
Sbjct: 332 LKRTSYVVLDEADRMLEMGFEDQIRQIFSNVRPDHQLLYWTATWPKKVEALANEFIKTPI 391
Query: 386 RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSK 445
R+ + S + I Q+ +C ++ +K K I VL+ + + + KVL
Sbjct: 392 RVQVGNGELSANPNITQNFTICETEADKTSKLIDVLEGIFTERPTA---KVLIFTMTKGG 448
Query: 446 FQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR-------KRPAVSMIDKDHISTAEL 498
L ++ G N + I + R KR + ++ +++ L
Sbjct: 449 ADKLADYIRSNG-------NARIDSIHGDKQQSRRIAIINAFKRDQLDILVATDVASRGL 501
Query: 499 EEYEVVIVPDFIISMKN----YVEILTSMARHTVSGILHSFFTK---DDAAHAGQMIEIL 551
+ + V +F SM N YV + AR SG HS +K +D +I++L
Sbjct: 502 DIRTITDVINF--SMPNQSESYVHRIGRTARAGASGYSHSLISKTSSNDIELIPDVIDLL 559
Query: 552 EQCGQVVPDALRDLC 566
E+ Q +P+ L+ L
Sbjct: 560 ERANQPIPEDLKALA 574
>gi|225463253|ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Vitis vinifera]
Length = 549
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 166/370 (44%), Gaps = 38/370 (10%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W +D + +GS T+ A+ V +++++ + P L L ++E
Sbjct: 160 WPFLLDHRDFIGIAATGSGKTL---AFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTREL 216
Query: 269 AAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ V C+ K G+ +V L+ G + QI+ L+S + ++ TP RL L+ +
Sbjct: 217 AQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSGV-DIVIGTPGRLKDLIEMGVCC 275
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRL 387
++ VS +V+D D + + + +++ C PA Q ++ + L
Sbjct: 276 LTEVSFVVLDEADRM--------LDMGFEPEVRSILSQTC------PARQMVMFSATWPL 321
Query: 388 SLNQSV-----ASQSACIIQSVNVCASDEEKILKGIQVLDH---------AYGDHFHSEP 433
++Q + +I S ++ A+ + +++ ++VLD G + S+
Sbjct: 322 PVHQLAQEFMDPNPVKVVIGSEDLAANHD--VMQIVEVLDDRSRDERLLTLLGKYHKSQR 379
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
+VL V + + + L+ +G+++ + + + + +K MI D
Sbjct: 380 NRVLVFVLYKKEAARVENMLQRRGWNVVSIHGDKAQQARTAALSLFKKGSCPLMIATDVA 439
Query: 494 STA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILE 552
+ ++ + EVVI F ++ ++YV + R G+ H+FF +++ AG+++ +L+
Sbjct: 440 ARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLK 499
Query: 553 QCGQVVPDAL 562
+ GQ+VP L
Sbjct: 500 EAGQIVPADL 509
>gi|147777235|emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera]
Length = 539
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 166/370 (44%), Gaps = 38/370 (10%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W +D + +GS T+ A+ V +++++ + P L L ++E
Sbjct: 150 WPFLLDHRDFIGIAATGSGKTL---AFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTREL 206
Query: 269 AAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ V C+ K G+ +V L+ G + QI+ L+S + ++ TP RL L+ +
Sbjct: 207 AQQISDVLCEAGKHCGVKSVCLYGGTSKGPQISSLKSG-VDIVIGTPGRLKDLIEMGVCC 265
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRL 387
++ VS +V+D D + + + +++ C PA Q ++ + L
Sbjct: 266 LTEVSFVVLDEADRM--------LDMGFEPEVRSILSQTC------PARQMVMFSATWPL 311
Query: 388 SLNQSV-----ASQSACIIQSVNVCASDEEKILKGIQVLDH---------AYGDHFHSEP 433
++Q + +I S ++ A+ + +++ ++VLD G + S+
Sbjct: 312 PVHQLAQEFMDPNPVKVVIGSEDLAANHD--VMQIVEVLDDRSRDERLLTLLGKYHKSQR 369
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
+VL V + + + L+ +G+++ + + + + +K MI D
Sbjct: 370 NRVLVFVLYKKEAARVENMLQRRGWNVVSIHGDKAQQARTAALSLFKKGSCPLMIATDVA 429
Query: 494 STA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILE 552
+ ++ + EVVI F ++ ++YV + R G+ H+FF +++ AG+++ +L+
Sbjct: 430 ARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLK 489
Query: 553 QCGQVVPDAL 562
+ GQ+VP L
Sbjct: 490 EAGQIVPADL 499
>gi|221131953|ref|XP_002164829.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Hydra
magnipapillata]
Length = 674
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 142/317 (44%), Gaps = 16/317 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT----VSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +V+SV FG+ T ++ GA+ QI L E +V
Sbjct: 179 GPICLVLCPTRELAIQVQSVAG---QFGLTTRVRSTCIYGGASKGPQIRDLERGS-EIVV 234
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ L+ ++ I + V+ LV+D D + IR+ I +P V T+
Sbjct: 235 ATPGRLIDLIEIRKISLKRVTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQVLMWSATW 294
Query: 371 T-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
V + L ++++ S + I+Q V+VC + EK K +++L+ G+
Sbjct: 295 PKEVRKLAEDFLTDYIQINIGSSDIHANHNILQIVDVC-EEYEKDRKLVKLLEEIMGEKE 353
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
+ K + K ++ L+ G+ + V + R A +I
Sbjct: 354 N----KTIIFCETKRKTDDITRRLRKDGWPAMCIHGDKSQPEREWVLKEFRSGKAPILIA 409
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D S ++ + V+ D+ S ++Y+ + AR +G ++FFT + +A +++
Sbjct: 410 TDVASRGLDIPDINFVVNYDYPNSGEDYIHRIGRTARAGNTGTAYTFFTSANGKYAAELL 469
Query: 549 EILEQCGQVVPDALRDL 565
+++E+ Q +P L +L
Sbjct: 470 KVMEEANQTIPPKLAEL 486
>gi|67521618|ref|XP_658870.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|74657573|sp|Q5BDW4.1|PRP5_EMENI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|40746703|gb|EAA65859.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|259488412|tpe|CBF87827.1| TPA: Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BDW4]
[Aspergillus nidulans FGSC A4]
Length = 1173
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 151/327 (46%), Gaps = 25/327 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 614 GPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 672
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 673 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATF 732
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V VC ++E+K ++ +++L + Y
Sbjct: 733 PRNMEALARKTLTKPIEIVVGGRSVVAPE--ITQIVEVC-NEEKKFVRLLELLGNLYSTD 789
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 790 -ENEDARSLIFVDRQEAADTLLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 842
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 843 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 902
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+A++ L +
Sbjct: 903 RYSVDIAKALKQSGQEVPEAVQKLVDS 929
>gi|378755949|gb|EHY65974.1| ATP-dependent RNA helicase DBP2 [Nematocida sp. 1 ERTm2]
Length = 517
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 175/411 (42%), Gaps = 45/411 (10%)
Query: 176 SKFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET----SGSSSTI 230
+KF A + A + G + P+ W + S +D++ SG + +
Sbjct: 93 TKFEYFGFPASVMAAFKSAGYSEPTPIQAQGWPLAL-----SGRDMVGVANTGSGKTLSF 147
Query: 231 VQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSL 289
+ A I A A + + + GP +L L ++E +++ CK K FG+ TV++
Sbjct: 148 ILPALIHAKAQKPLRQGD-------GPIVLVLAPTRELVSQIEEEACKYAKYFGLRTVAV 200
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLS 349
GA Q +R E L++TP RL+ L KA+ +S VS LV+D D +
Sbjct: 201 FGGAPAGPQKGAIRRGA-EILIATPGRLIDLYEQKAVFMSRVSFLVLDEADRMLDMGFEP 259
Query: 350 LIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCAS 409
+++ I P T L +++ + L N + + SA ++ +V
Sbjct: 260 QLKKII---PETNPNKQTLMWSATWPKEVRSLAR-NYMKDYIQIKIGSAELVANV----- 310
Query: 410 DEEKILKGIQVLDHAYGDHFHSEPL-----------KVLYIVGKDSKFQNLVSTLKCKGY 458
KI + ++DH D S+ L K++ + + +LV ++ G+
Sbjct: 311 ---KITQKTFIVDHWEKDKMLSDVLADVAGDEKLNPKIIIFCNQKRRCDDLVEKMQEYGW 367
Query: 459 SISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYV 517
+ ++ + D + ++ D + ++++ + VI DF + ++Y+
Sbjct: 368 PAEALHGDKPQNQRDRIIQDFKSGKRSILVATDVAARGLDVKDVKAVINYDFPTNCEDYI 427
Query: 518 EILTSMAR-HTVSGILHSFFT-KDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ AR ++ G+ +FF+ KDD ++A + +EIL+ Q VP L L
Sbjct: 428 HRIGRTARGNSEEGLALTFFSPKDDRSNARKYVEILKDSNQEVPQDLAALA 478
>gi|406862855|gb|EKD15904.1| dead box ATP-dependent rna helicase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1208
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 148/325 (45%), Gaps = 29/325 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA G+ V + GA I QI L+ E +V TP
Sbjct: 649 GPVGLIVTPTRELATQIHKECKPFLKAMGLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 707
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 708 GRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANIRPDRQTILFS--- 764
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + + +V +S I Q V V +++K + +++L Y
Sbjct: 765 --ATMPRIMDALAKKTLQSPVEITVGGRSVVAPEITQLVEV-REEKQKFHRLLELLGELY 821
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
+ E + L V + K +L+ L KGY SI G + I D K
Sbjct: 822 N---NDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKD----QIDRDSTIDDFKA 874
Query: 483 PAVSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDD 540
V ++ ++ L+ ++ +V +F +++YV R G +F T+D
Sbjct: 875 GVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGAKGTAVTFITEDQ 934
Query: 541 AAHAGQMIEILEQCGQVVPDALRDL 565
++ + + LEQ GQ VP+ L ++
Sbjct: 935 EQYSVGIAKALEQSGQPVPERLNEM 959
>gi|334310946|ref|XP_001370541.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Monodelphis domestica]
Length = 1179
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 174/415 (41%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 512 GKGCPK---PIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAI-----PAIMSGRDLIGI 563
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D A +E EG P + + ++E A ++ CK K
Sbjct: 564 AKTGSGKTIAFLLPMFRHIMDQRALEEGEG-----PIAVIMTPTRELALQITKECKKFSK 618
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 619 TLGLRVVCVYGGTGISEQIAELKRGA-EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 677
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 678 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 732
Query: 395 SQSACI--IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S ++ + +E K LK +++L H + E V+ V K L+
Sbjct: 733 GRSVVCSDVEQQVIVIEEENKFLKLLELLGH------YQESGSVIIFVDKQEHADGLLKD 786
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 787 LMRASYPCMSLHGGIDQYDRDSIINDF-KNGTCKLLVATSVAARGLDVKHLILVVNYSCP 845
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 846 NHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPHDLEKL 900
>gi|429848197|gb|ELA23711.1| pre-mRNA-processing atp-dependent rna helicase prp5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1165
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA G+ V + GA I QI L+ E +V TP
Sbjct: 640 GPIGLIMTPTRELAVQIHRDCKPFLKAMGLRAVCAYGGAPIRDQIAELKRGA-EIVVCTP 698
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ VS +V+D D + G +++ + +P T++F+
Sbjct: 699 GRMIDLLAANQGRVTNLRRVSYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 755
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + + + +V +S I Q V V D K + + +L Y
Sbjct: 756 --ATMPRIIDSLTKKVLKSPVEITVGGRSVVAPDITQKVEVIPEDA-KFVHLLGLLGELY 812
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
+ E + L V + K +L+ L KGY SI G + I ++S AD +K
Sbjct: 813 DE---DEDARTLIFVERQEKADDLLKELMVKGYPCMSIHGGKDQI---DRDSTIADFKKG 866
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I + ++++ ++V+ D +++YV R G +F T++
Sbjct: 867 IVPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNKGTAVTFITEEQE 926
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ +PD L ++
Sbjct: 927 NCAPGIAKALEQSGQPIPDRLNEM 950
>gi|223993165|ref|XP_002286266.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977581|gb|EED95907.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 480
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 168/404 (41%), Gaps = 45/404 (11%)
Query: 184 NAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAA 241
++I+ ++ G E+ P F+ S + W + D++ +GS T +++ +
Sbjct: 55 DSIQKTLKSAGFER--PTFIQS---QAWPIAINGSDMICVAKTGSGKTC---GFLLPSFH 106
Query: 242 DSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQIT 300
K GP +L L ++E A ++ + + GI +V + G+ QI
Sbjct: 107 QYFQSKATANKGGKGPIMLVLAPTRELACQILDETQKFGRPIGIRSVCCYGGSPKYAQIA 166
Query: 301 GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPH 360
L E +++TP RL L+ +K ++S V +V+D D + IR + P
Sbjct: 167 ALERGV-ECVIATPGRLNDLIEMKKANLSNVKFVVLDEADRMLDMGFEPQIRSIMGSVPD 225
Query: 361 TVVFNDCLTYTSVP-AVQNLLL-----------GSINRLSLNQSVASQSACIIQSVNVCA 408
+ L + P +Q L G IN L+ N+ I Q + +C+
Sbjct: 226 STNRQTLLFSATWPKEIQRLAFDFLSDPIQINVGEINVLNANKD-------ITQKIMMCS 278
Query: 409 SDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIV 468
D++ I L D HS KV+ VGK L + L +G+++ +
Sbjct: 279 EDDK-----IDRLKEILTDLKHS---KVIVFVGKKYVAHELANQLWDEGFAVDSLHGDRE 330
Query: 469 SHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISM-----KNYVEILTSM 523
+ V + K+ + ++ ++ L+ +V +V ++ + + ++Y+ +
Sbjct: 331 QWERTKV-INAFKQGTLRLLIATDVAARGLDVKDVGVVVNYDMPVGVNGAEDYIHRIGRT 389
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
R GI ++ FT D A Q++EILE+ Q VP L+ +
Sbjct: 390 GRAGAKGIAYTMFTPGDKKLATQLVEILEKAEQEVPAELKAMAR 433
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ NA++ G E+ P+ + S +D++
Sbjct: 353 GKGCPK---PIKTWVQCGVSMKILNALKKHGYEKPTPIQAQAI-----PAIMSGRDLIGI 404
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D +E EG P + + ++E A ++ CK K
Sbjct: 405 AKTGSGKTIAFLLPMFRHIMDQRPLEESEG-----PISVIMTPTRELALQITKECKKFSK 459
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 460 PLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLD 518
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I L V
Sbjct: 519 EADRMFDMGFEPQVMRIIDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPLEIQVG 573
Query: 395 SQSA-CIIQSVNVCASDEEK-ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S C +V DE+K LK +++L H + E V+ V K L+
Sbjct: 574 GRSVVCSDVEQHVLVIDEDKKFLKLLEILGH------YQEKGSVIIFVDKQEHADGLLKD 627
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K A ++ ++ L+ ++++V ++
Sbjct: 628 LMKASYPCMSLHGGIDQYDRDSIIND-FKNGACRLMVATSVAARGLDVKQLILVVNYNCP 686
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D +AG +I+ LE G VP L L
Sbjct: 687 NHYEDYVHRAGRTGRAGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPPELEQL 741
>gi|256074311|ref|XP_002573469.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228919|emb|CCD75090.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 879
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 159/384 (41%), Gaps = 49/384 (12%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL----ETSGSSSTIVQIAWIVATAADSIARKEKEGFS 253
D+P + G W S +D++ SG +++ + A + A A S+ R +
Sbjct: 98 DSPTPIQCQG---WPVALSGRDLVGIAQTGSGKTASFLLPAIVHAKAQPSLKRGD----- 149
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
GP +L LV ++E A +V V + + G + L+ GA+ Q L PE +++
Sbjct: 150 --GPIVLILVPTRELAQQVEKVAEDFCYSAGFKSACLYGGASRTGQAEAL-GQSPEVVIA 206
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT 371
TP RLL + + ++ + LV+D D + IR+ +S +P T+
Sbjct: 207 TPGRLLDFLESRHTNMRRCTYLVLDEADRMLDMGFEPSIRRVVSQVRPDRQTLMWSATWP 266
Query: 372 -SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGDH 428
V A+ L ++++ + S + I Q V + E+ ++L + D+A
Sbjct: 267 REVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNESEKFKRLLSLLNSFDNA---- 322
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+VL + L L+ KG+ + + K+ E D A+ M
Sbjct: 323 ------RVLVFTETKKRTDELCQKLQDKGFDATA-----MHGDKHQKERDR----ALDMF 367
Query: 489 DKDHISTA----------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ HIS ++ + +I D+ ++Y+ + R G ++FF+
Sbjct: 368 REGHISVLVATDVASRGLDINDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFSA 427
Query: 539 DDAAHAGQMIEILEQCGQVVPDAL 562
A ++IE+L++ Q +PD L
Sbjct: 428 KQPRLARELIEVLKEARQTIPDEL 451
>gi|198462622|ref|XP_002135340.1| GA28491 [Drosophila pseudoobscura pseudoobscura]
gi|198150906|gb|EDY73967.1| GA28491 [Drosophila pseudoobscura pseudoobscura]
Length = 537
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 10/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL--KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
GP L L ++E A +++SV AF + + GA Q + L+ E +++T
Sbjct: 176 GPIALVLAPTRELAQQIQSVANDFGSSAF-VRNTCVFGGAPRSKQASDLKRGV-EIIIAT 233
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT- 371
P RLL + A ++ + LV+D D + IR+ + +P + T+
Sbjct: 234 PGRLLDFLQSGATNLRRCTYLVLDEADRMLDMGFEPQIRKVLGQIRPDRQILMWSATWPK 293
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V + LGS ++++ S + I Q V VC + EK K +L H Y D H+
Sbjct: 294 EVRQLAEDFLGSYIQINIGSLELSANHNIRQYVEVCG-EHEKSAKLKDLLSHIY-DQAHA 351
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
P K++ V K L + G S+ + ++SV D R A ++ D
Sbjct: 352 -PGKIIIFVATKKKTDELARFINAFGVSVGSIHGDKSQMDRDSVLNDFRSGRANILVATD 410
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ +++ + VI D+ S ++Y+ + R G ++FFT+ +A A +I+I
Sbjct: 411 VAARGLDVDGIKYVINFDYPQSSEDYIHRIGRTGRKLSKGTSYAFFTRKNARCARALIDI 470
Query: 551 LEQCGQVVPDALRDL 565
L + Q V L +L
Sbjct: 471 LREANQNVNPELENL 485
>gi|384251941|gb|EIE25418.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 589
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 160/364 (43%), Gaps = 26/364 (7%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S D+ + +GS T+ A+ + +A+K + GP +L L ++E
Sbjct: 202 WPIIQSGSDLVGIAATGSGKTL---AFGLPGLKHILAQKAAGVSTGKGPSMLVLAPTREL 258
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ +V + ++ G+ T+ + G Q LR + +V+TP RL L++ A
Sbjct: 259 AQQIAAVLEEAGQSAGLRTLCAYGGVPKPPQTAALRQGV-DVVVATPGRLEDLINDGACR 317
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---LLGSI 384
+SGV+ LV+D D + IR +I+G + T PA+Q L SI
Sbjct: 318 LSGVTYLVLDEADRMLDLGFEPHIR-AIAGATRADRQTLMFSATWPPAIQKLASEFQASI 376
Query: 385 NRLSLNQSVASQSACIIQSVNV---CASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
R+++ S S + Q V V A D L+ + S +VL V
Sbjct: 377 ARVTIGSQDLSASHSVRQIVEVIDPAARDRR--------LEELLRKYHSSRKNRVLVFVL 428
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE-- 499
+ + + L +G+++ + ++ + S + K V ++ ++ L+
Sbjct: 429 YKKEAARVEAQLSKRGWNVRA-IHGDINQRQRSEAVEQFKSGKVPLLIATDVAARGLDIP 487
Query: 500 EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT-KDDAAHAGQMIEILEQCGQVV 558
+ E VI F ++ ++YV + R SG+ H+FF+ D AG++I +L++ Q V
Sbjct: 488 DVEAVINYSFPLTTEDYVHRIGRTGRAGKSGLSHTFFSGASDKPRAGELINVLKEANQEV 547
Query: 559 PDAL 562
P+ L
Sbjct: 548 PEEL 551
>gi|222623996|gb|EEE58128.1| hypothetical protein OsJ_09027 [Oryza sativa Japonica Group]
Length = 575
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 145/302 (48%), Gaps = 30/302 (9%)
Query: 275 VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLL 334
+C+ GI +V L+ G + QI+ L+S + ++ TP R+ L+ + ++ VS +
Sbjct: 250 LCEAGAPCGISSVCLYGGTSKGPQISALKSGV-DIVIGTPGRMKDLIEMGICRLNDVSFV 308
Query: 335 VVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLN 390
V+D D + + + +++ Q+ S + TV+F + T PAV L ++ +
Sbjct: 309 VLDEADRMLDMGFEPEVRAILSQTASVR-QTVMF----SATWPPAVHQLAQEFMDPNPIK 363
Query: 391 QSVASQSACIIQSVNVCASDEEKILKGIQVLDH--------AYGDHFH-SEPLKVLYIVG 441
+I S ++ A+ + +++ ++VLD A D +H ++ +VL V
Sbjct: 364 --------VVIGSEDLAANHD--VMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVL 413
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
+ + + L+ +G+S + H + + ++ MI D S ++ +
Sbjct: 414 YKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPD 473
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
EVVI + ++ ++YV + R G+ H+FFT+++ AG+++ +L + GQVVP
Sbjct: 474 VEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPP 533
Query: 561 AL 562
AL
Sbjct: 534 AL 535
>gi|195131547|ref|XP_002010212.1| GI14822 [Drosophila mojavensis]
gi|193908662|gb|EDW07529.1| GI14822 [Drosophila mojavensis]
Length = 963
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 162/379 (42%), Gaps = 37/379 (9%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ + A + + + R E GP L L ++
Sbjct: 267 WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHISNQPPLMRGE-------GPIALVLAPTR 319
Query: 267 EKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLK 319
E A +++SV CKP I + G++ Q L E +++TP RL+
Sbjct: 320 ELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLERGV-EVIIATPGRLID 374
Query: 320 LVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQ 377
+ + ++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 375 FLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALA 434
Query: 378 NLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVLDHAYGDHFHSE 432
L ++++ S + I Q V +C +E+ ++LK I + G +
Sbjct: 435 GDFLNDYIQINIGSMNLSANHNIRQIVEICNENEKPQLLVRLLKEITSPSNNGGSN---- 490
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K++ V K ++++ ++ +GY ++ ++SV D R + +I D
Sbjct: 491 --KIIIFVETKIKVEDILQIIRNEGYVATSIHGDKSQSERDSVLKDFRNGKSNILIATDV 548
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S +NYV + R G ++FFT D+A A ++I +L
Sbjct: 549 ASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVL 608
Query: 552 EQCGQVVPDALRDLCHTSP 570
E+ GQ L DL P
Sbjct: 609 EEAGQTPSQELLDLARAMP 627
>gi|154315049|ref|XP_001556848.1| hypothetical protein BC1G_04866 [Botryotinia fuckeliana B05.10]
gi|160419161|sp|A6RW79.1|PRP5_BOTFB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1151
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 23/322 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA G+ V + GA I QI L+ E +V TP
Sbjct: 627 GPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGA-EIIVCTP 685
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCL 368
R+++L+ S + ++ V+ +V+D D + G +++ +I T++F+ +
Sbjct: 686 GRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATM 745
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V ++EK + +++L Y
Sbjct: 746 PRIMDALAKKTLQSPVEIVVGGRSVVAPE--ITQIVEV-REEKEKFHRLLELLGELYN-- 800
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAV 485
E + L V + K +L+ L KGY SI G + + D K V
Sbjct: 801 -TDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKD----QVDRDSTIDDFKAGVV 855
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ ++ +V +F +++YV R +G +F T++ +
Sbjct: 856 PIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQY 915
Query: 544 AGQMIEILEQCGQVVPDALRDL 565
+ + + LEQ GQ VPD L ++
Sbjct: 916 SVGIAKALEQSGQEVPDRLNEM 937
>gi|195438679|ref|XP_002067260.1| GK16276 [Drosophila willistoni]
gi|194163345|gb|EDW78246.1| GK16276 [Drosophila willistoni]
Length = 950
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 166/376 (44%), Gaps = 29/376 (7%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ + + + I R E GP L L ++
Sbjct: 272 WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPILRGE-------GPVALVLAPTR 324
Query: 267 EKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLK 319
E A +++SV C+P I + G++ Q L E +++TP RL+
Sbjct: 325 ELAQQIQSVVRDYGHLCQPE----IRHTCIFGGSSKVPQARDLERGV-EVIIATPGRLID 379
Query: 320 LVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQ 377
+ + ++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 380 FLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALA 439
Query: 378 NLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH--AYGDHFHSEPLK 435
L ++++ S + I Q V +C ++ EK + +++L ++ + K
Sbjct: 440 GDFLNDYIQINIGSMNLSANHNIRQIVEIC-TEMEKPQRMMRLLKEIVPTTNNAANNLNK 498
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHIST 495
++ V K ++++ ++ +GY+ ++ + ++SV D R + +I D S
Sbjct: 499 IIIFVETKIKVEDILQIIRTEGYTATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASR 558
Query: 496 A-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQC 554
++E+ + VI D+ S +NYV + R G ++FFT D+A A ++I +LE+
Sbjct: 559 GLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEA 618
Query: 555 GQVVPDALRDLCHTSP 570
GQ AL DL + P
Sbjct: 619 GQTPSQALLDLARSMP 634
>gi|361130681|gb|EHL02431.1| putative Pre-mRNA-processing ATP-dependent RNA helicase prp5
[Glarea lozoyensis 74030]
Length = 1084
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 146/325 (44%), Gaps = 29/325 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP L+A G+ V + GA I QI L+ E +V TP
Sbjct: 527 GPIGLIMTPTRELATQIHKECKPFLRAMGLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 585
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 586 GRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANIRPDRQTILFS--- 642
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + +V +S I Q V V ++EK + +++L Y
Sbjct: 643 --ATMPRIMDALAKKTLNSPVEITVGGRSVVAPEITQIVEV-REEKEKFHRLLELLGELY 699
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
E + L V + K +L+ L KGY SI G + I D K
Sbjct: 700 D---KDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKD----QIDRDSTIDDFKA 752
Query: 483 PAVSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDD 540
+ ++ ++ L+ ++ +V +F +++YV R +G +F T+D
Sbjct: 753 GVIPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEDQ 812
Query: 541 AAHAGQMIEILEQCGQVVPDALRDL 565
+ + + LEQ GQ VPD L ++
Sbjct: 813 EQFSVGIAKALEQSGQPVPDRLNEM 837
>gi|347841781|emb|CCD56353.1| similar to pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Botryotinia fuckeliana]
Length = 1179
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 23/322 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA G+ V + GA I QI L+ E +V TP
Sbjct: 627 GPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGA-EIIVCTP 685
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCL 368
R+++L+ S + ++ V+ +V+D D + G +++ +I T++F+ +
Sbjct: 686 GRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATM 745
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V ++EK + +++L Y
Sbjct: 746 PRIMDALAKKTLQSPVEIVVGGRSVVAPE--ITQIVEV-REEKEKFHRLLELLGELYN-- 800
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAV 485
E + L V + K +L+ L KGY SI G + + D K V
Sbjct: 801 -TDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKD----QVDRDSTIDDFKAGVV 855
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ ++ +V +F +++YV R +G +F T++ +
Sbjct: 856 PIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQY 915
Query: 544 AGQMIEILEQCGQVVPDALRDL 565
+ + + LEQ GQ VPD L ++
Sbjct: 916 SVGIAKALEQSGQEVPDRLNEM 937
>gi|425774421|gb|EKV12728.1| DEAD/DEAH box RNA helicase [Penicillium digitatum PHI26]
gi|425783591|gb|EKV21433.1| DEAD/DEAH box RNA helicase [Penicillium digitatum Pd1]
Length = 1076
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 154/335 (45%), Gaps = 39/335 (11%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
S GP + L ++E A ++ CKP LKA G+ V + GA I QI L+ E +V
Sbjct: 503 STDGPIGMILSPTRELATQIHKDCKPFLKALGLRAVCAYGGAPIKDQIAELKRGA-EIIV 561
Query: 312 STPERLLKLVSL---KAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFN 365
T RL+ L++ + +++ ++ +V+ DR+ + G + I SI TV+F+
Sbjct: 562 CTAGRLIDLLAANQGRVLNLRRITYVVLDEGDRMFDMGFGPQVVKIMASIRPDRQTVLFS 621
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQ----SVASQSAC---IIQSVNVCASDEEKILKGI 418
+ + ++ R +LN+ +V +S I Q V V +D +K + +
Sbjct: 622 ATFPKS---------MEALARKTLNEPVEITVGGKSVVAPEITQIVEVRNND-QKFFRLL 671
Query: 419 QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEA 477
++L + Y D + E + L V + +L+ L KGY C+ H K+ ++
Sbjct: 672 ELLGNLYEDDAN-EDYRTLIFVDRQEAADDLLKQLMYKGYP------CMSIHGGKDQIDR 724
Query: 478 DGRKRPAVSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
D + + I ++T+ ++++ ++V+ D +++YV R +G
Sbjct: 725 DSTIQEFKAGIFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGT 784
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+F T++ +A + + L Q GQ VP+ L+ L
Sbjct: 785 AVTFVTEEQDRYALDIAKALRQSGQEVPEPLQKLV 819
>gi|302685145|ref|XP_003032253.1| hypothetical protein SCHCODRAFT_82297 [Schizophyllum commune H4-8]
gi|300105946|gb|EFI97350.1| hypothetical protein SCHCODRAFT_82297 [Schizophyllum commune H4-8]
Length = 488
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 19/319 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALVLAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EVVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 190 ATPGRLIDMLETGKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L ++++ + + I Q VC SD EK K I+ LD
Sbjct: 250 P-KDVQKLANDFLKDFIQVNIGSMELAANHNITQITEVC-SDFEKRNKLIKHLDQ----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
SE KVL VG ++ L+ G+ ++ V + + + +I
Sbjct: 303 ISSENAKVLIFVGTKRVADDITRYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R G +++FT ++A A ++
Sbjct: 363 ATDVASRGLDVKDIGYVINYDFPNNCEDYIHRIGRTGRAGAKGTAYTYFTTENAKSAREL 422
Query: 548 IEILEQCGQVVPDALRDLC 566
+ IL + QVVP L+++
Sbjct: 423 VSILTEAKQVVPPELQEMA 441
>gi|347971748|ref|XP_001688456.2| AGAP004351-PA [Anopheles gambiae str. PEST]
gi|333469011|gb|EDO64138.2| AGAP004351-PA [Anopheles gambiae str. PEST]
Length = 713
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 41/329 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A ++ + GI V L+ G QI +R+ E L++TP
Sbjct: 380 GPNVLVLAPTRELALQIEKEVAKYQFRGIKAVCLYGGGDRRAQINVVRNG-VEILIATPG 438
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVV----FNDCL 368
RL LV +DVS ++ L++D D + IR+ + TV+ + D +
Sbjct: 439 RLNDLVQEGVVDVSTITYLILDEADRMLDMGFEPQIRKVLLDVRPDRQTVMTSATWPDGV 498
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ--VLDHAYG 426
+ + + + I L L + + + Q + V DEE + I V D
Sbjct: 499 RRLAQSYMHDPIQVYIGTLDL-----AATHTVTQVIEVM--DEEDKFQRINEFVRDMQPT 551
Query: 427 DHFHSEPLKVLYIVGKDSKFQNL-----VSTLKCK---GYSISTGSNCIVSHIKNSVEAD 478
D KV+ GK ++ +L +S + C+ G + + IKN
Sbjct: 552 D-------KVIIFCGKKTRADDLSSEFILSNISCQAIHGNREQSDREQALEDIKNGT--- 601
Query: 479 GRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
+I D S ++E+ V+ DF +++ YV + R +GI SF T
Sbjct: 602 -----VKILIATDVASRGLDIEDITHVVNYDFPRNIEEYVHRVGRTGRAGRTGISLSFMT 656
Query: 538 KDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ D AG++I+IL++ Q VPD +RD+
Sbjct: 657 RSDWGVAGELIKILKEADQEVPDEVRDMA 685
>gi|167525611|ref|XP_001747140.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774435|gb|EDQ88064.1| predicted protein [Monosiga brevicollis MX1]
Length = 545
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 150/314 (47%), Gaps = 17/314 (5%)
Query: 257 PFLLFLVSSQEKAAKVRSVCK-PLKAFG-IHTVSLHPGAAIDHQITGLR-SCEPEFLVST 313
P +L L ++E A ++ V + +K+ I V ++ GA+ Q+T LR CE +++T
Sbjct: 200 PRVLVLSPTRELALQINKVAQDAVKSLNQISAVCVYGGASKRDQLTALRQGCE--LVIAT 257
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCLTY 370
P RL+ ++ +D+S VS LV+D D L G + LI ++ + T++F+
Sbjct: 258 PGRLVDFLNDGKLDLSHVSYLVLDEADRMLDMGFERDIKLILGAVGTQRQTLMFSATWP- 316
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
V A+ + + R+++ S + + Q V+V E + K ++LD H
Sbjct: 317 EEVRAIAANYMKNPLRVTVGSEELSANRNVKQVVDVV----EPMEKDRRLLD-VLRKHPA 371
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
S+ KVL + L S L+ K Y++ G + ++ + K ++
Sbjct: 372 SKNAKVLIFALYKKEAARLESFLQRKSYNV-VGMHGDLNQGQREAALRAYKSGDSHILIA 430
Query: 491 DHISTAELEEYEVVIVPD--FIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
++ L+ V +V + F +++++YV + R +GI ++FFT+ D AHAG +
Sbjct: 431 TDVAARGLDVKGVAVVINYTFPLTIEDYVHRIGRTGRAGATGIAYTFFTQHDKAHAGALG 490
Query: 549 EILEQCGQVVPDAL 562
+L + VP+AL
Sbjct: 491 NVLREADVEVPEAL 504
>gi|357119040|ref|XP_003561254.1| PREDICTED: uncharacterized protein LOC100821068 [Brachypodium
distachyon]
Length = 961
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 143/312 (45%), Gaps = 13/312 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V A GI++V L+ G + QI+ L+S E ++ TP
Sbjct: 617 PRCLMLAPTRELAQQIADVLTEAGAPCGINSVCLYGGTSKGPQISALKSGV-EIVIGTPG 675
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
R+ L+ + ++ VS +V+D D + + + +++ Q+ S + V+F+ +
Sbjct: 676 RMKDLIEMGVCRLNEVSFVVLDEADRMLDMGFEPEVRAILSQTSSIR-QMVMFSATWPFA 734
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
Q + + ++ + + + ++Q V V D + + + +LD + +
Sbjct: 735 VHQLAQEFMDPNPIKVVVGSEDLAANHDVMQIVEVL-DDRARDSRLVALLDK----YHRA 789
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
+ +VL V + + + L +G+ + H + + ++ MI D
Sbjct: 790 QSNRVLVFVLYKKEAGRVEAMLNKRGWKAVSVHGDKAQHDRTKALSLFKEGKCPLMIATD 849
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++ + EVVI F ++ ++YV + R G+ H+FFT+ D AG+++ +
Sbjct: 850 VASRGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQADKGLAGELVNV 909
Query: 551 LEQCGQVVPDAL 562
L + QVVP AL
Sbjct: 910 LREADQVVPPAL 921
>gi|255940232|ref|XP_002560885.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585508|emb|CAP93214.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1162
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 151/328 (46%), Gaps = 25/328 (7%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
S GP + L ++E A ++ CKP L+A G+ V + GA I QI L+ E +V
Sbjct: 590 STDGPISMILAPTRELATQIHKDCKPFLRALGLRAVCAYGGAPIKDQIAELKRGA-EIIV 648
Query: 312 STPERLLKLVSL---KAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFN 365
T RL+ L++ + +++ ++ +V+ DR+ + G + I SI TV+F+
Sbjct: 649 CTAGRLIDLLAANQGRVLNLRRITYVVLDEGDRMFDMGFGPQVVKIMASIRPDRQTVLFS 708
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ + L + +SV ++ I Q V V +D +K + +++L + Y
Sbjct: 709 ATFPKSMEALARKTLNDPVEITVGGKSVVARE--ITQIVEVRNND-QKFFRLLELLGNLY 765
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPA 484
D + E + L V + +L+ L KGY C+ H K+ ++ D +
Sbjct: 766 EDDAN-EDYRTLIFVDRQEAADDLLKQLMYKGYP------CMSIHGGKDQIDRDSTIQEF 818
Query: 485 VSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ + ++T+ ++++ ++V+ D +++YV R +G +F T+
Sbjct: 819 KAGVFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 878
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ +A + + L+Q GQ VP+ L+ L
Sbjct: 879 EQDRYALDIAKALKQSGQEVPEPLQKLV 906
>gi|195394063|ref|XP_002055665.1| GJ19487 [Drosophila virilis]
gi|194150175|gb|EDW65866.1| GJ19487 [Drosophila virilis]
Length = 953
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 162/379 (42%), Gaps = 35/379 (9%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ + + + I R E GP L L ++
Sbjct: 268 WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIMRGE-------GPIALVLAPTR 320
Query: 267 EKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLK 319
E A +++SV CKP I + G++ Q L E +++TP RL+
Sbjct: 321 ELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQARDLERGV-EVIIATPGRLID 375
Query: 320 LVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQ 377
+ + ++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 376 FLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALA 435
Query: 378 NLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVLDHAYGDHFHSE 432
L ++++ S + I Q V +C +E+ ++LK I + +
Sbjct: 436 GDFLNDYIQINIGSMNLSANHNIRQIVEICNENEKPQRMVRLLKDIAPTTNN----AANN 491
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K++ V K ++++ ++ +GY+ ++ ++SV D R + +I D
Sbjct: 492 GNKIIIFVETKIKVEDILQIIRSEGYTATSIHGDKSQSERDSVLKDFRNGKSNILIATDV 551
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S +NYV + R G ++FFT D+A A ++I +L
Sbjct: 552 ASRGLDVEDLQFVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVL 611
Query: 552 EQCGQVVPDALRDLCHTSP 570
E+ GQ AL +L P
Sbjct: 612 EEAGQTPSQALLELARAMP 630
>gi|403417986|emb|CCM04686.1| predicted protein [Fibroporia radiculosa]
Length = 755
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 35/393 (8%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTI--VQIAWIVATAA 241
I + +R G P+ +W + S +D+ + +GS TI A + A
Sbjct: 338 IMSTIRAQGFPAPTPIQCQAWPMAL-----SGRDVVAIAQTGSGKTISFALPAMLHINAQ 392
Query: 242 DSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDH 297
+A S GP L L ++E A +++ C FG I +++ GA
Sbjct: 393 PLLA-------SGDGPIALILAPTRELAVQIQQECT---KFGSNSKIRNTAIYGGAPKGP 442
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---S 354
QI L+ E +++TP RL+ ++ + ++ V+ LV+D D + IR+
Sbjct: 443 QIRDLQRGV-EIVIATPGRLIDMLETQKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVGQ 501
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKI 414
I T++F+ V + N L ++++ + + I Q V VC SD EK
Sbjct: 502 IRPDRQTLMFSATWP-KDVQKLANDFLKDFIQVNIGSMELTANHNIAQIVEVC-SDFEKR 559
Query: 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS 474
K I+ LD E KVL VG ++ L+ G+ ++
Sbjct: 560 SKLIKHLDQ-----ISQENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDW 614
Query: 475 VEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
V ++ + + +I D S ++++ VI DF + ++Y+ + R + G +
Sbjct: 615 VLSEFKAGRSPILIATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSY 674
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
++FT D+A A ++I IL + +VP L ++
Sbjct: 675 TYFTTDNAKSARELISILREAKAIVPPQLEEMA 707
>gi|322708721|gb|EFZ00298.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
anisopliae ARSEF 23]
Length = 1245
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 147/326 (45%), Gaps = 31/326 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK+ G+ V + GA I QI L+ E +V TP
Sbjct: 691 GPVGLIMTPTRELATQIHRDCKPFLKSMGLRAVCAYGGAPIRDQIAELKRGA-EIIVCTP 749
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + + + +G +P T++F+
Sbjct: 750 GRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFAGMRPDKQTILFS--- 806
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYG 426
++P + + L + + + +V +S + + EE K L+ +++L Y
Sbjct: 807 --ATMPRIIDSLTKKVLKSPVEITVGGRSVVAKEIEQIVEVREENTKFLRVLELLGELYD 864
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR----K 481
E + L V + K +L+ L KGY C+ H K+ V+ D K
Sbjct: 865 ---RDEDARALIFVDRQEKADDLLKELMVKGYP------CMSIHGGKDQVDRDSTISDFK 915
Query: 482 RPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ V ++ ++ L+ + ++VI D +++YV R +G+ +F T D
Sbjct: 916 KGVVPLLVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPD 975
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ Q VP+ L ++
Sbjct: 976 QENCAPGIAKALEQSEQPVPERLNEM 1001
>gi|307109457|gb|EFN57695.1| hypothetical protein CHLNCDRAFT_34665 [Chlorella variabilis]
Length = 422
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 35/373 (9%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT-GPFLLFLVSSQE 267
W + +D+ + GS T+ A+++ AA +A K G + GP L L+ ++E
Sbjct: 17 WPVLLAGRDVEAISEPGSGKTL---AYMLP-AAVLLATKGHGGSTLPDGPLALILLPTRE 72
Query: 268 KAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
A +V S C+ L+ + G+ T + G Q+ L S +P LV+TP RLL V A+
Sbjct: 73 LAQQVASACRDLRKYCGLRTCCITGGIDKQQQVEAL-SKQPHLLVATPGRLLDHVQDGAL 131
Query: 327 DVSGVSLLVVDRLD---SLSKGDTLSLIRQSI-----------SGKPHTVVFNDCLTYTS 372
++ VS LV+D D L + ++Q + K V T T
Sbjct: 132 KLAQVSYLVLDEADKMLGLGFQPQIEQLKQHLLPPAEQEGIAKKQKKMRRVQVALFTATM 191
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSAC----IIQSVNVCASDEE--KILKGIQ-VLDHAY 425
++Q L + + + + VA+ +AC I Q V VCA ++ K++K ++ + A
Sbjct: 192 PESLQELAAAWLQQPEVIR-VATSAACISSSITQVVQVCAEHKKSHKLIKHLEKITASAQ 250
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
G +VL + + + ++ GY + + D R A
Sbjct: 251 GARVRP---RVLIFTNRIKTCRFVHRLVQEAGYRATLLHGERGQEEREVAMLDFRSGKAQ 307
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
M+ D + + V+ D +M+ Y+ + R G SFFT++ A A
Sbjct: 308 IMVATDVAARGLHIRGLPHVVNWDLATNMEQYIHRVGRTGRLATDGHAFSFFTREMARLA 367
Query: 545 GQMIEILEQCGQV 557
G M+++L+Q GQV
Sbjct: 368 GAMVDLLQQHGQV 380
>gi|195048170|ref|XP_001992482.1| GH24775 [Drosophila grimshawi]
gi|193893323|gb|EDV92189.1| GH24775 [Drosophila grimshawi]
Length = 977
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 167/390 (42%), Gaps = 39/390 (10%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAAD--SIARKEKEGFSFT 255
P + S G W S +D+ + +GS T+ + + + I R E
Sbjct: 262 PTAIQSQG---WPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIMRGE------- 311
Query: 256 GPFLLFLVSSQEKAAKVRSV-------CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPE 308
GP L L ++E A +++SV CKP I + G++ Q+ L E
Sbjct: 312 GPIALVLAPTRELAQQIQSVVRDYGHLCKPE----IRHTCIFGGSSKVPQVRDLERGV-E 366
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDC 367
+++TP RL+ + + ++ + LV+D D + IR+ I +P V
Sbjct: 367 VIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWS 426
Query: 368 LTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVL 421
T+ V A+ L ++++ S + I Q V +C +E+ ++LK I
Sbjct: 427 ATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICNENEKPQRMMRLLKEITPS 486
Query: 422 DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRK 481
++A + K++ V K ++++ ++ +GY+ ++ ++SV D R
Sbjct: 487 NNA-----ANAGNKIIIFVETKIKVEDILQIIRNEGYTATSIHGDKSQSERDSVLRDFRN 541
Query: 482 RPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
+ +I D S ++E+ + VI D+ S +NYV + R G ++FFT D+
Sbjct: 542 GKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDN 601
Query: 541 AAHAGQMIEILEQCGQVVPDALRDLCHTSP 570
A A ++I +LE+ Q L DL P
Sbjct: 602 AKQARELISVLEEAEQTPSQELLDLARAMP 631
>gi|410516921|sp|Q4IP34.2|PRP5_GIBZE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
Length = 1207
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ V + GA I QI L+ E +V TP
Sbjct: 650 GPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGA-EIIVCTP 708
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 709 GRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 765
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
++P + + L + + + +V +S A I+ + + K + +++L Y
Sbjct: 766 --ATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGELYD 823
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
E + L V + K +L+ L KGY SI G + I ++S +D +K
Sbjct: 824 ---RDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQI---DRDSTISDFKKG- 876
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ + ++VI D +++YV R +G+ +F T +
Sbjct: 877 VVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQE 936
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ +PD L ++
Sbjct: 937 NCAPGIAKALEQSGQPIPDRLNEM 960
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 174/415 (41%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N++R G E+ P+ + S +D++
Sbjct: 306 GKGCPK---PIKSWVQCGISMKILNSLRKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 357
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 358 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 412
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
A G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 413 ALGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 471
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 472 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILNKPVEVQVG 526
Query: 395 SQSACI--IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S ++ + +E K LK +++L H + E V+ V K L+
Sbjct: 527 GRSVVCSDVEQQVIVIEEENKFLKLLELLGH------YQESGSVIIFVDKQEHADGLLKD 580
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 581 LMRASYPCMSLHGGIDQYDRDSIINDF-KSGTCKLLVATSVAARGLDVKHLILVVNYSCP 639
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G +F T+D A +AG +I+ LE G VP L L
Sbjct: 640 NHYEDYVHRAGRTGRAGNKGHAFTFITEDQARYAGDIIKALELSGTAVPADLEKL 694
>gi|328697410|ref|XP_001948642.2| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Acyrthosiphon pisum]
Length = 718
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 166/367 (45%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKE--KEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ A+++ AA I+ +E + G GP L L ++
Sbjct: 138 WPIALSGRDLVGIAQTGSGKTL---AYMLP-AAVHISNQEPLQRG---DGPIALVLAPTR 190
Query: 267 EKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
E A +++SV K + + I + G Q L++ E +++TP RL+ + +
Sbjct: 191 ELAQQIQSVAK-MFSSSIRNTCIFGGTPKGPQAHDLQNGV-EIVIATPGRLIDFLERGST 248
Query: 327 DVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSI 384
++ V+ LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 249 NLKRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAADFLVDY 308
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEP-LKVLYIVGKD 443
++++ + + I Q + VC D EK K +L +EP K + V K
Sbjct: 309 IQINVGSLELAANHNIQQLIEVC-EDHEKDYKLFDLLMK-----ISNEPGFKAIIFVEKK 362
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYE 502
K L +K +GY ++ ++ V + R + ++ D + ++++ +
Sbjct: 363 KKVDELTRQIKNEGYIATSMHGDKSQQDRDHVLNEFRNGKSPILVATDVAARGLDVDDVK 422
Query: 503 VVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
VI D+ S ++YV + R +GI ++FF+ ++ A +I ILE+ QVVP+ L
Sbjct: 423 YVINFDYPNSSEDYVHRIGRTGRSKQAGIAYTFFSTNNMRQAKDLISILEEAHQVVPEEL 482
Query: 563 RDLCHTS 569
++ + +
Sbjct: 483 IEMANMA 489
>gi|46108284|ref|XP_381200.1| hypothetical protein FG01024.1 [Gibberella zeae PH-1]
Length = 1227
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ V + GA I QI L+ E +V TP
Sbjct: 670 GPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGA-EIIVCTP 728
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 729 GRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 785
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
++P + + L + + + +V +S A I+ + + K + +++L Y
Sbjct: 786 --ATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGELYD 843
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
E + L V + K +L+ L KGY SI G + I ++S +D +K
Sbjct: 844 ---RDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQI---DRDSTISDFKKG- 896
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ + ++VI D +++YV R +G+ +F T +
Sbjct: 897 VVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQE 956
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ +PD L ++
Sbjct: 957 NCAPGIAKALEQSGQPIPDRLNEM 980
>gi|408391854|gb|EKJ71221.1| hypothetical protein FPSE_08584 [Fusarium pseudograminearum CS3096]
Length = 1192
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ V + GA I QI L+ E +V TP
Sbjct: 635 GPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGA-EIIVCTP 693
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 694 GRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 750
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
++P + + L + + + +V +S A I+ + + K + +++L Y
Sbjct: 751 --ATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGELYD 808
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
E + L V + K +L+ L KGY SI G + I ++S +D +K
Sbjct: 809 ---RDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQI---DRDSTISDFKKG- 861
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ + ++VI D +++YV R +G+ +F T +
Sbjct: 862 VVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQE 921
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ +PD L ++
Sbjct: 922 NCAPGIAKALEQSGQPIPDRLNEM 945
>gi|356531475|ref|XP_003534303.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Glycine max]
Length = 537
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 158/360 (43%), Gaps = 18/360 (5%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W +D++ +GS T+ A+ + + +++ + P L L ++E
Sbjct: 148 WPFLLDGRDLIGIAATGSGKTL---AFGLPAVMHVLGKRKGKSSKGRNPLGLVLSPTREL 204
Query: 269 AAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ V C ++ G+ ++ L+ G + QI+ L+S + ++ TP R+ L+ +
Sbjct: 205 AQQISDVMCDAGRSCGVQSICLYGGTSKGPQISSLKSG-IDIIIGTPGRIQDLIEMGICC 263
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP----HTVVFNDCLTYTSVPAVQNLLLGS 383
+ VS +V+D D + ++R SI G+ V+F+ Q + +
Sbjct: 264 LKEVSFVVLDEADRMLDMGFEQIVR-SILGQTCSDRQMVMFSATWPLPVHYLAQEFMDPN 322
Query: 384 INRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD 443
++ + + + ++Q V V D+ K + L Y S+ +VL V
Sbjct: 323 PVKVVVGSEDLAANHDVMQIVEVL--DDRSRDKRLAALLEKY---HKSQRNRVLVFVLYK 377
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYE 502
+ + + + L+ G+ + + H + + + MI D + ++ + E
Sbjct: 378 LEAKRVENMLQEGGWKVVSIHGDKAQHDRTKALSLFKNGSCPLMIATDVAARGLDIPDVE 437
Query: 503 VVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
VVI F ++ ++YV + R G+ H+FF + + AG+++ +L + GQ+VPDAL
Sbjct: 438 VVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAGQIVPDAL 497
>gi|156053343|ref|XP_001592598.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980]
gi|160419162|sp|A7ENE0.1|PRP5_SCLS1 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|154704617|gb|EDO04356.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1114
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 23/322 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA G+ V + GA I QI L+ E +V TP
Sbjct: 556 GPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGA-EIIVCTP 614
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCL 368
R+++L+ S + ++ V+ +V+D D + G +++ +I T++F+ +
Sbjct: 615 GRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATM 674
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V ++EK + +++L Y
Sbjct: 675 PRIMDALAKKTLQSPVEIVVGGRSVVAPE--ITQIVEV-REEKEKFHRLLELLGELYN-- 729
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAV 485
E + L V + K +L+ L KGY SI G + + D K V
Sbjct: 730 -ADEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKD----QVDRDSTIDDFKAGVV 784
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ ++ +V +F +++YV R +G +F T++ +
Sbjct: 785 PIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQY 844
Query: 544 AGQMIEILEQCGQVVPDALRDL 565
+ + + LEQ GQ VP+ L ++
Sbjct: 845 SVGIAKALEQSGQEVPERLNEM 866
>gi|119173770|ref|XP_001239279.1| DEAD/DEAH box RNA helicase [Coccidioides immitis RS]
gi|118597491|sp|Q1DHB2.1|PRP5_COCIM RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|392869485|gb|EJB11830.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
immitis RS]
Length = 1197
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 149/327 (45%), Gaps = 25/327 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 632 GPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 690
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + + IS +P TV+F+
Sbjct: 691 GRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIISNIRPSRQTVLFSATF 750
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV +Q I Q V V + K ++ +++L + Y D
Sbjct: 751 PRNMEALARKTLTKPVEIIVGGRSVVAQE--ITQIVEV-RPENTKFVRLLELLGNLYSDD 807
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
++E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 808 -NNEDARALIFVDRQEAADGLLRDLMRKGYP------CMSIHGGKDQVDRDSTIDDFKAG 860
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++VI D +++YV R +G +F T++
Sbjct: 861 IFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQE 920
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+A++ + +
Sbjct: 921 RYSVDIAKALKQSGQSVPEAVQKMVDS 947
>gi|291225668|ref|XP_002732809.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 795
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEP--EFLVS 312
GP L ++E + ++ CK KA+ IHTV + G + Q ++C+ E LV+
Sbjct: 330 GPIGLICAPTRELSQQIHQECKKFGKAYNIHTVCAYGGGNMWEQT---KACQAGCEILVA 386
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCL 368
TP RL+ LV KA ++ V+ LV+D D + +R SI+ +P T++F+
Sbjct: 387 TPGRLIDLVKRKATNLERVTFLVLDEADRMFDMGFEPQVR-SIANHVRPDRQTLLFSATF 445
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+++L I + + A++ ++Q V + K I+ L
Sbjct: 446 RKKVERLARDILTDPIRVIQGDLGEANED--VVQIVECLSDGPAKWPWLIKRLVS----- 498
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
F +E VL V K + + L S LK + + + +N V + +K+ ++
Sbjct: 499 FTTEG-SVLIFVTKKANSEELASNLKTHDFDLGLLHGDMDQSERNKVITNFKKQQMPILV 557
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D + ++ + V+ D + + + R + G ++ T+ D AG +
Sbjct: 558 ATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGIKGTAYTLVTQKDVNFAGDL 617
Query: 548 IEILEQCGQVVPDALRDLC 566
+ LE GQ VP+ L DL
Sbjct: 618 VRNLEGAGQRVPEKLMDLA 636
>gi|322695045|gb|EFY86860.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
acridum CQMa 102]
Length = 1161
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 31/326 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK+ G+ V + GA I QI L+ E +V TP
Sbjct: 607 GPIGLIMTPTRELATQIHRDCKPFLKSMGLRAVCAYGGAPIRDQIAELKRGA-EIIVCTP 665
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + + + +G +P T++F+
Sbjct: 666 GRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFAGMRPDKQTILFS--- 722
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYG 426
++P + + L + + + +V +S + + EE K + +++L Y
Sbjct: 723 --ATMPRIIDSLTKKVLKSPVEITVGGRSVVAKEIEQIVEVREESTKFFRVLELLGELYD 780
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR----K 481
E + L V + K +L+ L KGY C+ H K+ V+ D K
Sbjct: 781 ---RDEDARALIFVDRQEKADDLLKELMVKGYP------CMSIHGGKDQVDRDSTISDFK 831
Query: 482 RPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ V ++ ++ L+ + ++VI D +++YV R +G+ +F T D
Sbjct: 832 KGVVPLLVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPD 891
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ Q VP+ L ++
Sbjct: 892 QENCAPGIAKALEQSEQPVPERLNEM 917
>gi|66801681|ref|XP_629765.1| hypothetical protein DDB_G0292010 [Dictyostelium discoideum AX4]
gi|60463168|gb|EAL61361.1| hypothetical protein DDB_G0292010 [Dictyostelium discoideum AX4]
Length = 777
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L +V ++E A +V S CKPL++ F IH+++++ G + Q L E +++TP
Sbjct: 386 GPMVLIIVPTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQKDILGQEHNEIIIATP 445
Query: 315 ERLLKLVSLKAIDV---SGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
RL+ L+ V GV +L++ DR+ L GD L I + I T++F+
Sbjct: 446 GRLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLGFGDQLQKISEQIRPDRQTLMFSATF 505
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNV 406
T A + L + ++ + S +Q + I S NV
Sbjct: 506 PQTMQDAAKKWLTNPL-KIRVKSSSTNQGSTSIISKNV 542
>gi|320037247|gb|EFW19185.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
posadasii str. Silveira]
Length = 853
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 174/397 (43%), Gaps = 37/397 (9%)
Query: 188 NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIA 245
+ +R G EQ P + S I S +D++ +GS TI + + D
Sbjct: 228 DVIRKLGYEQ--PTSIQSQAI---PAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRP 282
Query: 246 RKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRS 304
+ EG P L + ++E A ++ CKP LKA + V + GA I QI L+
Sbjct: 283 LENMEG-----PVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKR 337
Query: 305 CEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP- 359
E +V TP R++ L+ S + ++ V+ +V+D D + + + IS +P
Sbjct: 338 GA-EIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIISNIRPS 396
Query: 360 -HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGI 418
TV+F+ + L + + +SV +Q I Q V V + K ++ +
Sbjct: 397 RQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAQE--ITQIVEV-RPENTKFVRLL 453
Query: 419 QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEA 477
++L + Y D ++E + L V + L+ L KGY C+ H K+ V+
Sbjct: 454 ELLGNLYSDD-NNEDARALIFVDRQEAADGLLRDLMRKGYP------CMSIHGGKDQVDR 506
Query: 478 DGRKRPAVSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
D + I I+T+ ++++ ++VI D +++YV R +G
Sbjct: 507 DSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGT 566
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+F T++ ++ + + L+Q GQ VP+A++ + +
Sbjct: 567 AVTFLTEEQERYSVDIAKALKQSGQSVPEAVQKMVDS 603
>gi|328873292|gb|EGG21659.1| hypothetical protein DFA_01545 [Dictyostelium fasciculatum]
Length = 1285
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 161/396 (40%), Gaps = 49/396 (12%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIAR-KEKEGFS------FTGPFLLF 261
W + D+L +GS T+ +++ +A+ K++ G GP +L
Sbjct: 784 WSAVMTGNDVLTIAQTGSGKTL---GYLLPAIPHVLAQMKQRSGLQVKGMPPIRGPIVLI 840
Query: 262 LVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKL 320
+V ++E A +V +VCKPL++ GIH+++++ G Q L E +++TP RL+ L
Sbjct: 841 IVPTRELAQQVDAVCKPLRSKLGIHSLAIYGGVKSYEQKEILSQEHNEIVIATPGRLVDL 900
Query: 321 VSLKAIDVSG----VSLLV---VDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV 373
+ ++ +V G VSLL+ DR+ L GD L I + I T++F+ T
Sbjct: 901 IQ-RSEEVVGLLSRVSLLIFDEADRMLQLGFGDQLQKISEQIRPDRQTLMFSATFAKTMQ 959
Query: 374 PAVQNLLLGSINRLSLNQSVASQSACII-----QSVNVCASDEEKILKGIQVLDHAYGDH 428
A L + + S ++ +I Q V V D+ + + LD +
Sbjct: 960 EASTKWLKNPLKIRVKSSSANEENTAVITKNVKQVVKVIKEDQRQDYL-FKFLDSIFTKE 1018
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-------STGSNC------IVSHIKNSV 475
++ I F N V ++K +I S C + H ++ V
Sbjct: 1019 TTMRNRSLILI------FVNHVRSVKPLSLAIEKMLTKQSRKYKCGAIHGDLKQHERDQV 1072
Query: 476 EADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHS 534
D + ++ D + + VI DF S++ Y+ + R G +
Sbjct: 1073 INDFKAGKMTVLVATDILGRGIHINNLRFVINYDFPTSLEQYIHRVGRTGRQGNKGHALT 1132
Query: 535 FF--TKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+ + A ++ ILE+C Q V LR L +
Sbjct: 1133 LYCDIPQNQTFAKGLVRILEECSQQVDPQLRVLAES 1168
>gi|219114457|ref|XP_002176399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402645|gb|EEC42635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 575
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 22/325 (6%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
FT P LL L ++E + ++ + + GI +V + GA+ QI L+ E ++
Sbjct: 209 GFTKPILLVLAPTRELSVQILEEAQKFGRPLGIRSVCCYGGASKHPQIAALQRGV-ECVI 267
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP----HTVVFNDC 367
+TP RL L+ ++ D+S V LV+D D + IR I P T++F+
Sbjct: 268 ATPGRLNDLIEMRKADLSKVQYLVLDEADRMLDMGFEPQIRSIILNIPPENRQTLLFSAT 327
Query: 368 LTYTSVPAVQNLLLG--SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ L IN +N VA++ IQ V S+ EK+ K Q+L
Sbjct: 328 WPKEIQALAHDFLKNPIQINVGEVNALVANKD---IQQTIVMCSESEKLDKLEQILR--- 381
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
D H K++ V K +L + L G+++ + + V +
Sbjct: 382 -DLMHG---KIIVFVAKKISCNDLANRLWEDGFAVDSLHGDRPQWERTRVMQAFKGGQLR 437
Query: 486 SMIDKDHISTA-ELEEYEVVI---VPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I D + ++++ VV+ +P + +++YV + R G ++FFT+ D
Sbjct: 438 VLIATDVAARGLDVKDVGVVVNYDMPSGVNGVEDYVHRIGRTGRAGNKGKAYTFFTQGDR 497
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
+A Q++++L + Q +P L+ +
Sbjct: 498 KNATQLVQVLTKAQQEIPPELQAMA 522
>gi|303324443|ref|XP_003072209.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240111919|gb|EER30064.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 1197
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 149/327 (45%), Gaps = 25/327 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 632 GPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 690
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + + IS +P TV+F+
Sbjct: 691 GRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIISNIRPSRQTVLFSATF 750
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV +Q I Q V V + K ++ +++L + Y D
Sbjct: 751 PRNMEALARKTLTKPVEIIVGGRSVVAQE--ITQIVEVRPENT-KFVRLLELLGNLYSDD 807
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
++E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 808 -NNEDARALIFVDRQEAADGLLRDLMRKGYP------CMSIHGGKDQVDRDSTIDDFKAG 860
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++VI D +++YV R +G +F T++
Sbjct: 861 IFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQE 920
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+A++ + +
Sbjct: 921 RYSVDIAKALKQSGQSVPEAVQKMVDS 947
>gi|71006426|ref|XP_757879.1| hypothetical protein UM01732.1 [Ustilago maydis 521]
gi|74703402|sp|Q4PDT1.1|DBP3_USTMA RecName: Full=ATP-dependent RNA helicase DBP3
gi|46097315|gb|EAK82548.1| hypothetical protein UM01732.1 [Ustilago maydis 521]
Length = 585
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 259 LLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEP-EFLVSTPER 316
+L + ++E A + ++ K K+ GI + L+ G + Q+ L P +V TP R
Sbjct: 242 VLVIAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGR 301
Query: 317 LLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLI---RQSISGKPHTVVFNDCLT 369
+L + ++D+SGV+ LV+D D L KG D ++I + G+ HT +F +
Sbjct: 302 VLDMARDGSLDLSGVTYLVLDEADRMLDKGFEPDIRAIIGMCKSREEGR-HTSMF----S 356
Query: 370 YTSVPAVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
T PAV+ L +N R+++ S + + Q+V V A + K ++ D
Sbjct: 357 ATWPPAVRGLAESFMNGPVRVTVGSDELSANRRVEQTVEVLA---DGYAKERRLNDFLRS 413
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS-----TGSNCIVSHIKNSVEADGRK 481
+ K+L + Q + TL+ G+ +S G N ++ ++ A+
Sbjct: 414 VNAQRSKDKILIFALYKKEAQRIEQTLRRGGFKVSGIHGDLGQNERIASLERFKSAETPL 473
Query: 482 RPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
A + + ++ E V+ F +++++YV + R +G +FFT+ D
Sbjct: 474 LVATDVAARG----LDIPNVEHVVNYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTEMDK 529
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
AHAG++I +L+ Q VPDAL T
Sbjct: 530 AHAGELIRVLKDADQKVPDALTKFPTT 556
>gi|387594137|gb|EIJ89161.1| ATP-dependent RNA helicase DBP2 [Nematocida parisii ERTm3]
gi|387595665|gb|EIJ93288.1| ATP-dependent RNA helicase DBP2 [Nematocida parisii ERTm1]
Length = 511
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 179/406 (44%), Gaps = 40/406 (9%)
Query: 182 CLN--------AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIV 231
CLN ++ A + G P+ W + S +D++ +GS T+
Sbjct: 92 CLNFEYFGFPSSVMAAFKSAGYSAPTPIQAQGWPMAL-----SGRDMVGVANTGSGKTL- 145
Query: 232 QIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLH 290
++I+ + A+K S GP +L L ++E +++ K K FG+ TV+++
Sbjct: 146 --SFILPALIHAKAQKPLR--SGDGPIVLVLAPTRELVSQIEEEASKYAKYFGLRTVAVY 201
Query: 291 PGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL 350
GA Q +R E L++TP RL+ L KA+ +S VS LV+D D +
Sbjct: 202 GGAPAGPQKGAIRRGA-EILIATPGRLIDLFDQKAVFMSRVSFLVLDEADRMLDMGFEPQ 260
Query: 351 IRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCAS- 409
+++ I P T L +++ + L N ++ V SA ++ +V +
Sbjct: 261 LKKII---PETNPKRQTLMWSATWPKEVRSLAR-NYMTDYIQVKIGSADLVANVKITQKT 316
Query: 410 ------DEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
+++K+L VL GD + P K++ + + +LV ++ G+
Sbjct: 317 FMVDHWEKDKMLS--DVLTDVAGDE-KANP-KIIIFCNQKRRCDDLVDKMQEYGWPAEAL 372
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTS 522
+ ++ + D + ++ D + ++++ + VI DF + ++Y+ +
Sbjct: 373 HGDKPQNQRDRIIQDFKSGKRSILVATDVAARGLDVKDVKAVINYDFPTNCEDYIHRIGR 432
Query: 523 MAR-HTVSGILHSFFT-KDDAAHAGQMIEILEQCGQVVPDALRDLC 566
AR ++V G+ +FF+ KDD ++A + EIL+ Q +P L L
Sbjct: 433 TARGNSVEGLSITFFSPKDDRSNARKYTEILKDSNQEIPQDLAALA 478
>gi|242023201|ref|XP_002432024.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212517382|gb|EEB19286.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 610
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 141/322 (43%), Gaps = 22/322 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E + ++V P +A GI +V+++ G+ Q LR+ E V+TP
Sbjct: 274 GPIALVLAPTRELVQQTQNVAIPFARASGIRSVAVYGGSDKYGQDRHLRNGT-EICVATP 332
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RLL ++ ++ + LV+D D + IR I +P V T+
Sbjct: 333 GRLLDFLNSGTTNLERCTYLVLDEADRMFDMGFEPQIRSIIDQIRPDRQVLMWSATWPKE 392
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
+ + L +L++ + + I Q V+VC S+ +K K +Q + G+ +
Sbjct: 393 IKRLAEEYLKDYIQLNVGSQELTANPNINQIVHVCQSERDK--KKLQNVLKEIGEQ---D 447
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
+K L K ++ L+ GY S+ G K D R + ++
Sbjct: 448 EIKTLIFTATKQKSDSIAFWLQDLGYRCDSLHGG--------KTQKNRDFILRGRIKILV 499
Query: 490 KDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
++ L+ + VI D+ +M++Y+ + RH +G ++F T +DA+ AG +
Sbjct: 500 ATDVAARGLDVSDIRYVINYDYPNNMEDYIHRIGRTGRHNATGTSYTFLTDEDASKAGDL 559
Query: 548 IEILEQCGQVVPDALRDLCHTS 569
I +L + Q V L +L ++
Sbjct: 560 ISVLREANQNVDPDLENLAMSA 581
>gi|351725777|ref|NP_001237872.1| DEAD-box RNA helicase [Glycine max]
gi|229893773|gb|ACQ90244.1| DEAD-box RNA helicase [Glycine max]
Length = 537
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 166/377 (44%), Gaps = 23/377 (6%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G E+ +P+ +W +D++ +GS T+ A+ + + +++ +
Sbjct: 136 GFEKPSPIQSRAWPFLL-----DGRDLIGIAATGSGKTL---AFGIPAVMHVLGKRKGKS 187
Query: 252 FSFTGPFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFL 310
P L L ++E A ++ V C ++ G+ ++ L+ G + QI+ L+S + +
Sbjct: 188 SKGRNPLGLVLSPTRELAQQISDVMCDAGRSCGVQSICLYGGTSKGPQISSLKSG-IDIV 246
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP----HTVVFND 366
+ TP R+ L+ + + VS +V+D D + ++R SI G+ V+F+
Sbjct: 247 IGTPGRIQDLIEMGICCLKEVSFVVLDEADRMLDMGFEQIVR-SILGQTCSDRQMVMFSA 305
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
Q + + ++ + + + ++Q V V D + + + +L+
Sbjct: 306 TWPLPVHYLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVL-DDRSRDKRLVALLEK--- 361
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ S+ +VL V + + + + L+ G+ + + H + + +
Sbjct: 362 -YHKSQRNRVLVFVLYKLEAKRVENMLQEGGWKVVSIHGDKAQHDRTKALSLFKNASCPL 420
Query: 487 MIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG 545
MI D + ++ + EVVI F ++ ++YV + R G+ H+FF + + AG
Sbjct: 421 MIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAG 480
Query: 546 QMIEILEQCGQVVPDAL 562
+++ +L + GQ VPDAL
Sbjct: 481 ELVNVLREAGQTVPDAL 497
>gi|388581859|gb|EIM22166.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 419
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 153/362 (42%), Gaps = 25/362 (6%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W C KD + +GS T+ A A ++R S +L + ++E
Sbjct: 41 WPCLLQGKDTIGIAETGSGKTL-------AFAIPGLSRHVLSDASNKTASILVIAPTREL 93
Query: 269 AAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
A + L ++ L+ G + D Q ++ +P +V TP RLL L + +D
Sbjct: 94 AVQTYDNIDKLNI--TQSICLYGGVSKDEQKRTIKKNKPRVIVGTPGRLLDLANDGGVDF 151
Query: 329 SGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNLLLGSIN 385
S V LV+D D + I IS P T +F+ SV A+ +
Sbjct: 152 SNVKYLVLDEADRMLDQGFEKDITAIISKTPKERQTAMFSATWP-QSVRALAATFMKDPV 210
Query: 386 RLSLNQ---SVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
R+++ + + +I++++ E+++ ++ + G+ +VL
Sbjct: 211 RVTVGSEELTANKRVDQVIETLDNGRMKEQRLNAHLKSIRKDMGNA------RVLVFALY 264
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
+ + +TL+ G+++ + + + AD + ++ D + ++
Sbjct: 265 KKEASRIENTLRRGGHAVGSIHGDLSQQQRMKALADFKDGSVPLLVATDVAARGLDIPNV 324
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
EVVI F +++++YV + R G +FFT DD +HAG+++++L + G +P+
Sbjct: 325 EVVINVTFPLTIEDYVHRIGRTGRGGAYGKSITFFTDDDKSHAGELMKVLREGGYEIPEG 384
Query: 562 LR 563
L+
Sbjct: 385 LK 386
>gi|336383448|gb|EGO24597.1| hypothetical protein SERLADRAFT_449372 [Serpula lacrymans var.
lacrymans S7.9]
Length = 487
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 143/319 (44%), Gaps = 19/319 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALVLAPTRELAVQIQQECT---KFGSSSRIRNTAIYGGAPKGPQIRDLQRGV-EVVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ + ++ ++ LV+D D + IR+ +S +P T++F+
Sbjct: 190 ATPGRLIDMLETQKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L + ++++ + + I Q V VC SD EK K I+ LD
Sbjct: 250 P-KDVQKLANDFLKDMIQVNIGSMELTANHNIQQIVEVC-SDFEKRAKLIKHLDQ----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL VG ++ L+ G+ ++ V + + + +I
Sbjct: 303 ISAENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R + G +++FT D+A A ++
Sbjct: 363 ATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSAREL 422
Query: 548 IEILEQCGQVVPDALRDLC 566
I IL + VP L ++
Sbjct: 423 IGILREAKANVPPQLEEMA 441
>gi|170099095|ref|XP_001880766.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644291|gb|EDR08541.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 498
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 19/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALVLAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ + ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 190 ATPGRLIDMLETQKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L + ++++ + + I Q V VC SD EK K I+ LD
Sbjct: 250 P-KDVQKLANDFLRDMIQVNIGSMELTANHNIQQIVEVC-SDFEKRNKLIKHLDQ----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL V ++ L+ G+ ++ V + + + +I
Sbjct: 303 ISAENAKVLIFVATKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R + GI +++FT D+A A ++
Sbjct: 363 ATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGISYTYFTTDNAKSAREL 422
Query: 548 IEILEQCGQVVPDALRDL 565
I IL + VP L ++
Sbjct: 423 IGILREAKATVPPQLEEM 440
>gi|256074313|ref|XP_002573470.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228918|emb|CCD75089.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 875
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 159/376 (42%), Gaps = 37/376 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL----ETSGSSSTIVQIAWIVATAADSIARKEKEGFS 253
D+P + G W S +D++ SG +++ + A + A A S+ R +
Sbjct: 98 DSPTPIQCQG---WPVALSGRDLVGIAQTGSGKTASFLLPAIVHAKAQPSLKRGD----- 149
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
GP +L LV ++E A +V V + + G + L+ GA+ Q L PE +++
Sbjct: 150 --GPIVLILVPTRELAQQVEKVAEDFCYSAGFKSACLYGGASRTGQAEAL-GQSPEVVIA 206
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT 371
TP RLL + + ++ + LV+D D + IR+ +S +P T+
Sbjct: 207 TPGRLLDFLESRHTNMRRCTYLVLDEADRMLDMGFEPSIRRVVSQVRPDRQTLMWSATWP 266
Query: 372 -SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGDH 428
V A+ L ++++ + S + I Q V + E+ ++L + D+A
Sbjct: 267 REVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNESEKFKRLLSLLNSFDNA---- 322
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+VL + L L+ KG+ + + K+ E D +S++
Sbjct: 323 ------RVLVFTETKKRTDELCQKLQDKGFDATA-----MHGDKHQKERDRALDSHISVL 371
Query: 489 DKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+++ L+ + +I D+ ++Y+ + R G ++FF+ A +
Sbjct: 372 VATDVASRGLDINDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFSAKQPRLARE 431
Query: 547 MIEILEQCGQVVPDAL 562
+IE+L++ Q +PD L
Sbjct: 432 LIEVLKEARQTIPDEL 447
>gi|193678797|ref|XP_001952274.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Acyrthosiphon pisum]
Length = 621
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 134/326 (41%), Gaps = 35/326 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E ++ S K GI +S++ GA+ Q LR E +++TP
Sbjct: 272 GPSILVLAPTRELVLQIESEVKKYSYKGIKAMSIYGGASSGKQKEVLRKGV-EIVIATPG 330
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI-SGKPHTVVFNDCLTYTSVP 374
RL V AID+S V+ L++D D + IR S+ +P T+ P
Sbjct: 331 RLNDFVGSGAIDLSDVTFLILDEADRMLDLGFEPQIRVSLLRVRPDRQTIMTSATWP--P 388
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFH-- 430
V+ L S + V S + +V ++ DEE+ + D F
Sbjct: 389 GVKRLA-KSYTTNPIQVMVGSLDLTTVNTVKQDILIMDEEE--------KEVWLDDFLKS 439
Query: 431 -SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM-- 487
S K++ V + L S L KGY IV I E R+ S+
Sbjct: 440 CSADDKIIIFVNRKVTVDQLSSDLCMKGY--------IVESIHGGREQCDREMALESLRN 491
Query: 488 ------IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
I D S ++ + VVI DF ++ YV + R +G+ + T+ D
Sbjct: 492 GEVNILIATDVASRGIDINDITVVINYDFTKDIEEYVHRVGRTGRAGKTGLAITLMTRRD 551
Query: 541 AAHAGQMIEILEQCGQVVPDALRDLC 566
A ++E++E+ GQ VP L+++
Sbjct: 552 WGKAKDLVEVMEKSGQDVPPELQEMA 577
>gi|47221754|emb|CAG08808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1046
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 174/416 (41%), Gaps = 43/416 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ +A++ E+ P+ + S +D++
Sbjct: 335 GKGCPK---PIKTWVQCGVSMKILSALKKHTYEKPTPIQAQAI-----PAVMSGRDLIGI 386
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D +E EG P + + ++E A ++ CK K
Sbjct: 387 AKTGSGKTIAFLLPMFRHIMDQRPLEESEG-----PIAVIMTPTRELALQITKECKKFSK 441
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 442 PLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLD 500
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R S +P TV+F+ + P L I + V
Sbjct: 501 EADRMFDMGFEPQVMRIVDSVRPDRQTVMFS-----ATFPRAMEALARRILNKPIEVQVG 555
Query: 395 SQSAC---IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+S + Q V V D K LK +++L H + E V+ V K L+
Sbjct: 556 GRSVVCSDVEQHVLVIEEDN-KFLKLLELLGH------YQERGSVIIFVDKQEHADGLLK 608
Query: 452 TLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFII 511
L Y + I + ++S+ D K A ++ ++ L+ ++++V ++
Sbjct: 609 DLMKASYPCMSLHGGIDQYDRDSIIND-FKSGACRLMVATSVAARGLDVKQLILVVNYNC 667
Query: 512 S--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 668 PNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYAGDIIKALELSGSSVPPELEQL 723
>gi|395504324|ref|XP_003756504.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Sarcophilus
harrisii]
Length = 1030
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 173/415 (41%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ E+ P+ + S +D++
Sbjct: 363 GKGCPK---PIKTWVQCGISMKILNSLKKHCYEKPTPIQAQAI-----PAIMSGRDLIGI 414
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D A +E EG P + + ++E A ++ CK K
Sbjct: 415 AKTGSGKTIAFLLPMFRHIMDQRALEEGEG-----PIAVIMTPTRELALQITKECKKFSK 469
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 470 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 528
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 529 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 583
Query: 395 SQSACI--IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S ++ + +E K LK +++L H + E V+ V K L+
Sbjct: 584 GRSVVCSDVEQQVIVIEEENKFLKLLELLGH------YQESGSVIIFVDKQEHADGLLKD 637
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 638 LMRASYPCMSLHGGIDQYDRDSIINDF-KNGTCKLLVATSVAARGLDVKHLILVVNYSCP 696
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 697 NHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 751
>gi|357620337|gb|EHJ72567.1| hypothetical protein KGM_14750 [Danaus plexippus]
Length = 516
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 171/392 (43%), Gaps = 31/392 (7%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
I+N ++ G + P + S G W + K+ + +G+ T+ A+++
Sbjct: 98 IKNFLQEQGFTK--PTLIQSQG---WPIAMAGKNFVGIAQTGTGKTL---AYLLPAV--- 146
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL 302
I KE +G GP L L ++E A ++ V K + I + ++ G + +Q L
Sbjct: 147 IQLKENKGRRGKGPRALVLAPTRELARQIEEVAKDFERLLNIRCLCIYGGVSRSNQAQQL 206
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTV 362
+ + L++TP RL ++ + +S + +V+D D + IRQ++ P+
Sbjct: 207 QR-GVDILIATPGRLNDFLNSRVTTLSRCTYVVLDEADRMLDMGFEPQIRQALEDVPYE- 264
Query: 363 VFNDCLTYTSV--PAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKG 417
L +++ VQ+L LG ++++ + + + I Q + VC D +K+ K
Sbjct: 265 --RQILMFSATWPKEVQHLAKDYLGEFVQVNVGSTELTANHNIKQCIYVCEQD-QKMDKF 321
Query: 418 IQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEA 477
++ G+ F KVL +L L+ G+ + G + + ++ +
Sbjct: 322 KSIMHEISGNGFG----KVLVFTNTKKFVDSLTLALQRNGWP-AVGIHGDKTQLQRDIII 376
Query: 478 DGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ + +++ ++ L+ V V+ DF + ++Y+ + R G+ H+
Sbjct: 377 NKFRSGKTNILVATDVAARGLDVDGVTHVVNYDFPNTSEDYIHRIGRTGRSDNKGVAHTI 436
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
T ++A A +I++L++ Q VP L LC
Sbjct: 437 LTSENARQARSLIQVLKEAKQEVPHELEQLCR 468
>gi|328717963|ref|XP_001951743.2| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Acyrthosiphon pisum]
Length = 556
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 154/352 (43%), Gaps = 19/352 (5%)
Query: 221 LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL- 279
+ ++GS T+ I + A S RK G GP +L L ++E A ++++VC
Sbjct: 144 IASTGSGKTLSYI--VPALIHISHQRKLSRG---DGPIVLVLSPTRELAQQIQTVCDDFG 198
Query: 280 KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL 339
AFG+ + L GA Q + L S E +++TP RLL + + ++ + LV+D
Sbjct: 199 DAFGVSSTCLFGGAPKGGQASDL-SRGVELVIATPGRLLDFLESERTNMCRCTYLVLDEA 257
Query: 340 DSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVAS 395
D + IR+ I +P V T+ V+NL L ++++ +
Sbjct: 258 DRMLDMGFEPQIRKIIDQIRPDRQVLMWSATWPK--EVKNLAEEFLDEYIQINIGSLTLA 315
Query: 396 QSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKC 455
+ I Q V VC + +K K I +L + + K + + + + +K
Sbjct: 316 ANHNIQQIVEVC-QEYDKETKLISLLKKIMDEDEN----KTIVFIETKRRVDEITRKIKR 370
Query: 456 KGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMK 514
GYS + +++V D R ++ D + ++E+ + VI D+ + +
Sbjct: 371 HGYSAVCIHGDKSQYERDNVLKDFRDSRYPILVATDVAARGLDVEDVKFVINFDYPNNSE 430
Query: 515 NYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+YV + R +G ++FFT+ +A A ++ +L + Q + L+D+
Sbjct: 431 DYVHRIGRTGRSHKTGTAYTFFTQSNAKQAADLVSVLTEANQTISPKLKDIA 482
>gi|326928709|ref|XP_003210518.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Meleagris gallopavo]
Length = 1027
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 175/415 (42%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ A++ G E+ P + S I + +D++
Sbjct: 360 GKGCPK---PIKTWVQCGISMKILTALKKHGYEKPTP--IQSQAI---PAIMNGRDLIGI 411
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D A +E EG P + + ++E A ++ CK K
Sbjct: 412 AKTGSGKTIAFLLPMFRHIMDQRALEEGEG-----PIAVIMTPTRELALQITKECKKFSK 466
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ +++ + ++ V+ +V+D
Sbjct: 467 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLD 525
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 526 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 580
Query: 395 SQSACI--IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S ++ + +E K LK +++L H + E V+ V K L+
Sbjct: 581 GRSVVCSDVEQHVIVIEEENKFLKLLELLGH------YQEKGSVIIFVDKQEHADGLLKD 634
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ ++++V ++
Sbjct: 635 LMRASYPCLSLHGGIDQYDRDSIINDF-KNGTCKLLVATSVAARGLDVKQLMLVVNYSCP 693
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G +P L L
Sbjct: 694 NHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYAGDIIKALELSGNPIPADLEKL 748
>gi|164657065|ref|XP_001729659.1| hypothetical protein MGL_3203 [Malassezia globosa CBS 7966]
gi|159103552|gb|EDP42445.1| hypothetical protein MGL_3203 [Malassezia globosa CBS 7966]
Length = 560
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 139/324 (42%), Gaps = 23/324 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++++ C+ A + T S++ G QI L+ E +++TP
Sbjct: 208 GPIALILAPTRELAVQIQNECQRFGSACRVRTTSVYGGVPKGQQIRSLQRGA-EIVIATP 266
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYT 371
RL+ ++ + ++ V+ LV+D D + IR + I T++F+
Sbjct: 267 GRLIDMMEIGKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVEQIRPDRQTLMFSATWP-K 325
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V + + L ++++ + + + Q + VC +++ +++ H +H
Sbjct: 326 EVQRMASDFLNDYVQVNIGSMELAANHNVKQVIEVCTEFDKRG----RLIKHL--EHISQ 379
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
E KV+ G +L L+ G+ + K E D R S
Sbjct: 380 ENGKVIIFTGTKRAADDLTKFLRQDGWP-----GLAIHGDKQQDERDWVLREFKSGNSPI 434
Query: 492 HISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG 545
++TA ++++ VI DF + ++Y+ + R G+ +FFT +++ A
Sbjct: 435 MVATAVASRGLDVKDISYVINSDFPTNTEDYIHQIGRTGRAGRKGVAITFFTSENSKSAR 494
Query: 546 QMIEILEQCGQVVPDALRDLCHTS 569
++ IL + Q VP L+D+ S
Sbjct: 495 DLVGILREANQEVPPELQDMVRYS 518
>gi|342887883|gb|EGU87311.1| hypothetical protein FOXB_02187 [Fusarium oxysporum Fo5176]
Length = 1214
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 151/324 (46%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ +V + GA I QI L+ E +V TP
Sbjct: 657 GPIGLIMTPTRELAVQIHRDCKPFLKMMGLRSVCAYGGAPIRDQIAELKRGA-EIIVCTP 715
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 716 GRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 772
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
++P + + L + + + +V +S A I + + K L+ +++L Y
Sbjct: 773 --ATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIDQIVEVRDEPSKFLRVLELLGELYD 830
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
E + L V + K +L+ L KGY SI G + I ++S +D +K
Sbjct: 831 ---RDEDARTLIFVERQEKADDLLKELMIKGYPCMSIHGGKDQI---DRDSTISDFKKG- 883
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ + ++VI D +++YV R +G+ +F T +
Sbjct: 884 VVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQE 943
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
+ + + LEQ GQ VP+ L ++
Sbjct: 944 NCSVGIAKALEQSGQPVPERLDEM 967
>gi|336370677|gb|EGN99017.1| hypothetical protein SERLA73DRAFT_137127 [Serpula lacrymans var.
lacrymans S7.3]
Length = 332
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 19/322 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 15 GPIALVLAPTRELAVQIQQECT---KFGSSSRIRNTAIYGGAPKGPQIRDLQRGV-EVVI 70
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ + ++ ++ LV+D D + IR+ +S +P T++F+
Sbjct: 71 ATPGRLIDMLETQKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 130
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L + ++++ + + I Q V VC SD EK K I+ LD
Sbjct: 131 P-KDVQKLANDFLKDMIQVNIGSMELTANHNIQQIVEVC-SDFEKRAKLIKHLDQ----- 183
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL VG ++ L+ G+ ++ V + + + +I
Sbjct: 184 ISAENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILI 243
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R + G +++FT D+A A ++
Sbjct: 244 ATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSAREL 303
Query: 548 IEILEQCGQVVPDALRDLCHTS 569
I IL + VP L ++ S
Sbjct: 304 IGILREAKANVPPQLEEMAMFS 325
>gi|350629482|gb|EHA17855.1| hypothetical protein ASPNIDRAFT_55865 [Aspergillus niger ATCC 1015]
Length = 1198
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 25/325 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 638 GPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 696
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 697 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 756
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D++K ++ +++L + Y
Sbjct: 757 PRNMEALARKTLTKPIEIVVGGKSVVAPE--ITQIVEV-RNDDQKFVRLLELLGNLYSSD 813
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 814 -ENEDARALIFVDRQEAADALLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 866
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 867 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 926
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
++ + + L+Q GQ VP+ ++ L
Sbjct: 927 RYSVDIAKALKQSGQKVPEPVQKLV 951
>gi|363739175|ref|XP_414629.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Gallus
gallus]
Length = 1028
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 175/415 (42%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ A++ G E+ P + S I + +D++
Sbjct: 361 GKGCPK---PIKTWVQCGISMKILTALKKHGYEKPTP--IQSQAI---PAIMNGRDLIGI 412
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D A +E EG P + + ++E A ++ CK K
Sbjct: 413 AKTGSGKTIAFLLPMFRHIMDQRALEEGEG-----PIAVIMTPTRELALQITKECKKFSK 467
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ +++ + ++ V+ +V+D
Sbjct: 468 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLD 526
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 527 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 581
Query: 395 SQSACI--IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S ++ + +E K LK +++L H + E V+ V K L+
Sbjct: 582 GRSVVCSDVEQHVIVIEEENKFLKLLELLGH------YQEKGSVIIFVDKQEHADGLLKD 635
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ ++++V ++
Sbjct: 636 LMRASYPCLSLHGGIDQYDRDSIINDF-KNGTCKLLVATSVAARGLDVKQLMLVVNYSCP 694
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G +P L L
Sbjct: 695 NHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYAGDIIKALELSGNPIPADLEKL 749
>gi|66800715|ref|XP_629283.1| hypothetical protein DDB_G0293036 [Dictyostelium discoideum AX4]
gi|74896762|sp|Q54CD6.1|DDX5_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx5; AltName:
Full=DEAD box protein 5
gi|60462668|gb|EAL60870.1| hypothetical protein DDB_G0293036 [Dictyostelium discoideum AX4]
Length = 697
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 211 WKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARK-------EKEGFSFTGPFLLF 261
W + DI+ TS GS T+ +A ++ + R EK +TG +L
Sbjct: 237 WPAILTGHDIIGTSLPGSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLV 296
Query: 262 LVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKL 320
LV ++E +V S + + FGI T ++ G + + QI L +P+ L+STP RL+++
Sbjct: 297 LVPTRELGLQVHSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEM 356
Query: 321 VSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVF 364
+ +D+S V++LV+D D LSKG L IR I ++F
Sbjct: 357 IENGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILF 403
>gi|327351907|gb|EGE80764.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1205
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ + ++ E +
Sbjct: 593 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLLPMFRHIMDQRPLE--NME 644
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 645 GPIGLIMTPTRELATQIHKECKPFLKALSLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 703
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKPH--TVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G ++R + +P TV+F+
Sbjct: 704 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATF 763
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 764 PRNMEALARKTLTKPVEIIVGGRSVVAPE--ITQVVEVRNEDT-KFVRLLALLGDLYADD 820
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 821 -KNEDARALIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRDSTIDDFKAG 873
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 874 VFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 933
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+ ++ L ++
Sbjct: 934 RYSVDISKALKQSGQPVPEPVQKLVNS 960
>gi|170038849|ref|XP_001847260.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167862451|gb|EDS25834.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 709
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 27/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L + ++E A ++ + + GI + L+ G QI + E ++ TP
Sbjct: 366 GPNVLVMAPTRELALQIEKEVQKYQFKGIKAICLYGGGDRRQQIKKVGEGV-EIIICTPG 424
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL LVS ID++ ++ LV+D D L G + + + +P T+ P
Sbjct: 425 RLNDLVSANVIDITSITYLVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSATWP--P 482
Query: 375 AVQNLLLGSI-NRLSLNQSVASQSAC--IIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V+ L + N + + +A + Q + V +E+K ++ + + + +
Sbjct: 483 GVRRLAQSYMKNPVQVYVGTLDLAATHTVTQQIEVI-DEEDKYVRVMGFVKNMGKND--- 538
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH------IKNSVEADGRKRPAV 485
K + G+ ++ +L S + +G NC H + D +
Sbjct: 539 ---KAIIFCGRKTRADDLSSEF------VLSGINCQSIHGDRDQADREQALEDIKSGDVR 589
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+I D S ++E+ V+ DF +++ YV + R +GI SFFT+ D A A
Sbjct: 590 VLIATDVASRGLDIEDITHVVNYDFPRNIEEYVHRVGRTGRAGRTGISLSFFTRSDWAIA 649
Query: 545 GQMIEILEQCGQVVPDALRDLCH 567
++I+ILE+ Q VPD +R +
Sbjct: 650 AELIKILEEAEQDVPDEIRAMAE 672
>gi|258617566|gb|ACV83780.1| DEAD box ATP-dependent RNA helicase-like protein [Heliconius
melpomene]
Length = 646
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 164/387 (42%), Gaps = 22/387 (5%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
I N ++ G E+ P + + G W S +D+ + ++GS T+ A+++ A
Sbjct: 246 IMNTIKEQGWEE--PTGIQAQG---WPIALSGRDMVGIASTGSGKTL---AYMLPAAVHI 297
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGL 302
+ ++ + GP L L ++E A +++SV + A G I L G+ Q L
Sbjct: 298 VHQQRIQ--RGDGPIALILAPTRELAQQIQSVAQAYSAHGCIRNTCLFGGSPKGPQARDL 355
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHT 361
E +++TP RL+ + ++ + LV+D D + IR+ I +P
Sbjct: 356 ERGV-EIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 414
Query: 362 VVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQV 420
V T+ + A+ L ++++ S + I Q + VC + EK +K +
Sbjct: 415 QVLMWSATWPKEIQALAEDFLTDYVKVNIGSLNLSANNNIKQIIEVC-EEHEKEVKLTNL 473
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
L + + KV+ V K ++ ++ G+ +++V + R
Sbjct: 474 LKEIASEKDN----KVIVFVETKKKVDDIARAVRRNGHKALAIHGDKSQQERDAVLTEFR 529
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+I D + ++E+ + V+ D+ + ++Y+ + R SG +++FT
Sbjct: 530 NGATTILIATDVAARGLDVEDVKFVVNFDYPNTSEDYIHRIGRTGRCQQSGTAYTYFTSG 589
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLC 566
DA A ++ +L + GQ P L D+
Sbjct: 590 DARQARSLLAVLRETGQNPPAKLNDMA 616
>gi|255089334|ref|XP_002506589.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226521861|gb|ACO67847.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 576
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 140/336 (41%), Gaps = 32/336 (9%)
Query: 247 KEKEGFSF---TGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGL 302
+ ++G SF GP + L ++E A +++ K +A G+++V L+ GA HQ+ L
Sbjct: 188 RGRQGPSFPRPVGPTVTVLAPTRELATQIQDETAKFGRAIGMYSVCLYGGAPKGHQLREL 247
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--- 359
R P+ ++TP RL + A+++ + +V+D D + IR+ + P
Sbjct: 248 RHG-PQIAIATPGRLNDFLESGAVNLGSSTYVVLDEADRMLDMGFEPQIRKILQRAPAQR 306
Query: 360 HTVVFNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDEEKILKG 417
T+ F V +L I N + VA++ I Q V VC +K +
Sbjct: 307 QTLFFTATWPRAVVRVATAILTNPIQVNIGDTDTLVANKD--ITQVVEVCGG-FQKQQRL 363
Query: 418 IQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEA 477
++VL + ++PLK + G + ++ G ++ K E
Sbjct: 364 MEVLRNP-----PTQPLKAIVFCGTKKMCDQIGRSMG--------GMGAVIHGDKEQRER 410
Query: 478 DG-----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
D R ++ D + +++E +V+ DF +++YV + R G
Sbjct: 411 DWILNQFRSGRVPVLVATDVAARGLDIKEVNMVVNFDFPNQIEDYVHRIGRTGRAGNKGW 470
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
HSF + A ++I IL GQ VP L D+
Sbjct: 471 AHSFIEPGEGNMARKLIPILRDAGQDVPAELDDMAR 506
>gi|224068070|ref|XP_002188600.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Taeniopygia
guttata]
Length = 1031
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 174/415 (41%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ A++ G E+ P+ + + +D++
Sbjct: 364 GKGCPK---PIKTWVQCGISMKILTALKKHGYEKPTPIQTQAI-----PAIMNGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D A +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRALEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ +++ + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACI--IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S ++ + +E K LK +++L H + E V+ V K L+
Sbjct: 585 GRSVVCSDVEQHVIVIEEENKFLKLLELLGH------YQEKGSVIIFVDKQEHADGLLKD 638
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ ++++V ++
Sbjct: 639 LMRASYPCLSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKQLMLVVNYSCP 697
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G +P L L
Sbjct: 698 NHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGNPIPPDLEKL 752
>gi|402224487|gb|EJU04549.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 486
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 19/317 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALVLAPTRELAVQIQQECT---KFGSNSRIRNTAVYGGAPKGQQIRDLQRGV-EVVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCL 368
+TP RL+ ++ ++ V+ LV+D D + IR+ I T++F+
Sbjct: 190 ATPGRLIDMLESGKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
Q+ L I ++++ S + I Q V VC SD EK +G ++L H D
Sbjct: 250 PKEVQRLAQDFLKDFI-QVNIGSMDLSANPNIEQIVEVC-SDFEK--RG-KLLKHL--DK 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL VG ++ L+ G+ ++ V ++ + + +I
Sbjct: 303 ISNENAKVLIFVGTKRTADDITKYLRQDGWPALAIHGDKEQRERDWVLSEFKASRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF ++++Y+ + R +G+ +++FT D+A A ++
Sbjct: 363 ATDVASRGLDVKDVGYVINYDFPNNIEDYIHRIGRTGRAGNTGVSYTYFTTDNAKQAREL 422
Query: 548 IEILEQCGQVVPDALRD 564
I+IL VP L +
Sbjct: 423 IKILRDAQMNVPPQLEE 439
>gi|261194749|ref|XP_002623779.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
gi|239588317|gb|EEQ70960.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
Length = 1197
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 172/394 (43%), Gaps = 49/394 (12%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ + ++ E +
Sbjct: 585 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLLPMFRHIMDQRPLE--NME 636
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 637 GPIGLIMTPTRELATQIHKECKPFLKALSLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 695
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G ++R ++ + TV+F+
Sbjct: 696 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATF 755
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 756 PRNMEALARKTLTKPVEIIVGGRSVVAPE--ITQVVEVRNEDT-KFVRLLALLGDLYADD 812
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ V+ D S
Sbjct: 813 -KNEDARALIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRD-------ST 858
Query: 488 IDKDH-------ISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHS 534
ID I+T+ ++++ ++V+ D +++YV R +G +
Sbjct: 859 IDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVT 918
Query: 535 FFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
F T+D ++ + + L+Q GQ VP+ ++ L ++
Sbjct: 919 FLTEDQERYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|317030312|ref|XP_001392304.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
niger CBS 513.88]
gi|143359932|sp|A2QQA8.2|PRP5_ASPNC RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1180
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 25/325 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 620 GPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 678
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 679 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 738
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D++K ++ +++L + Y
Sbjct: 739 PRNMEALARKTLTKPIEIVVGGKSVVAPE--ITQIVEV-RNDDQKFVRLLELLGNLYSSD 795
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 796 -ENEDARALIFVDRQEAADALLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 848
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 849 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 908
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
++ + + L+Q GQ VP+ ++ L
Sbjct: 909 RYSVDIAKALKQSGQKVPEPVQKLV 933
>gi|325089715|gb|EGC43025.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H88]
Length = 1199
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ + ++ E +
Sbjct: 585 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLLPMFRHIMDQRPLE--NME 636
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 637 GPIGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 695
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKPH--TVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G ++R + +P TV+F+
Sbjct: 696 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATF 755
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 756 PRNMEALARKTLAKPVEIIVGGKSVVAPE--ITQIVEVRNQDT-KFVRLLALLGELYADD 812
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 813 -KNEDARALIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRDSTIDDFKAG 865
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 866 VFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 925
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+ ++ L ++
Sbjct: 926 RYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|239613405|gb|EEQ90392.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ER-3]
Length = 1197
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 171/387 (44%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ + ++ E +
Sbjct: 585 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLLPMFRHIMDQRPLE--NME 636
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 637 GPIGLIMTPTRELATQIHKECKPFLKALSLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 695
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G ++R ++ + TV+F+
Sbjct: 696 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATF 755
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 756 PRNMEALARKTLTKPVEIIVGGRSVVAPE--ITQVVEVRNEDT-KFVRLLALLGDLYADD 812
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 813 -KNEDARALIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRDSTIDDFKAG 865
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 866 VFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 925
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+ ++ L ++
Sbjct: 926 RYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|328852836|gb|EGG01979.1| hypothetical protein MELLADRAFT_78893 [Melampsora larici-populina
98AG31]
Length = 537
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 39/390 (10%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIV--QIAWIVATAADSIA 245
+R G + +P+ +W + S +D++ S GS TI A I A +A
Sbjct: 122 IRKAGFTEPSPIQCQAWPMAL-----SGRDVVAISATGSGKTIAFSLPAMIHINAQPLLA 176
Query: 246 RKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRS 304
+ GP +L L ++E A +++ C A I ++ G QI L S
Sbjct: 177 PGD-------GPIVLILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDL-S 228
Query: 305 CEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHT 361
E +++TP RL+ ++ + ++ V+ LV+D D L G + I + I T
Sbjct: 229 RGAEIVIATPGRLIDMLESRRTNLQRVTYLVMDEADRMLDMGFEPQIKKILEQIRPDRQT 288
Query: 362 VVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVL 421
++F+ + + N L ++++ + + I Q V VC SD EK K I+ L
Sbjct: 289 LMFSATWP-KEIQRLANEYLKDFIQVNVGSLELTANVNITQIVEVC-SDFEKKGKLIKHL 346
Query: 422 DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD--- 478
+ +E KVL VG +L L+ G+ + + K E D
Sbjct: 347 -----EKISAESAKVLIFVGTKRVADDLTKYLRQDGW-----PSLAIHGDKQQTERDWVL 396
Query: 479 GRKRPAVS--MIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
G + S MI D S ++++ VI D +++Y+ + R +G +S+
Sbjct: 397 GEFKSGRSPIMIATDVASRGLDVKDVAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSY 456
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
+ D A ++++IL+ QVVP AL +L
Sbjct: 457 ISADQGKLARELVKILQDAKQVVPPALVEL 486
>gi|134076811|emb|CAK39865.1| unnamed protein product [Aspergillus niger]
Length = 1191
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 25/325 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 631 GPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 689
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 690 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 749
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D++K ++ +++L + Y
Sbjct: 750 PRNMEALARKTLTKPIEIVVGGKSVVAPE--ITQIVEV-RNDDQKFVRLLELLGNLYSSD 806
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 807 -ENEDARALIFVDRQEAADALLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 859
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 860 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 919
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
++ + + L+Q GQ VP+ ++ L
Sbjct: 920 RYSVDIAKALKQSGQKVPEPVQKLV 944
>gi|358372963|dbj|GAA89564.1| pre-mRNA-processing ATP-dependent RNA helicase Prp5 [Aspergillus
kawachii IFO 4308]
Length = 1178
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 25/325 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 618 GPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 676
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 677 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 736
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D++K ++ +++L + Y
Sbjct: 737 PRNMEALARKTLTKPIEIVVGGKSVVAPE--ITQIVEV-RNDDQKFVRLLELLGNLYSSD 793
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 794 -ENEDARALIFVDRQEAADALLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 846
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 847 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 906
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
++ + + L+Q GQ VP+ ++ L
Sbjct: 907 RYSVDIAKALKQSGQKVPEPVQKLV 931
>gi|147818849|emb|CAN62968.1| hypothetical protein VITISV_032272 [Vitis vinifera]
Length = 62
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 42/52 (80%)
Query: 294 AIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKG 345
A+ + L+SCEPEFLV+TPERLL+L+SLKAID+SGVSLL R+ + ++G
Sbjct: 11 AVSMEAPCLKSCEPEFLVATPERLLELISLKAIDISGVSLLDNPRMVAYTQG 62
>gi|299471751|emb|CBN76972.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1339
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 144/319 (45%), Gaps = 26/319 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ + + KA G+ +++ GA + QI L+ E +V TP
Sbjct: 765 GPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGA-EIVVCTP 823
Query: 315 ERLLKLVSLKA---IDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ +++++A + + VS +V+D D + + +I Q++ T +F+
Sbjct: 824 GRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATF 883
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
T + +L + + +S+AS I Q V + D++K ++ +Q+L Y
Sbjct: 884 PRTVETLAKRVLKMPLEIIVGGRSIASSD--ITQHVEI-RDDDDKFMRLLQLLGVWY--- 937
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAV 485
E +L V SK L L GY S+ G + ++ AD + + A
Sbjct: 938 ---EKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKD---QTDRDFTIADFKNKSAT 991
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
M+ ++ L+ ++V V ++ +++YV + R G ++F + ++ H
Sbjct: 992 LMV-ATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTGRAGRKGTAYTFISAEEEKH 1050
Query: 544 AGQMIEILEQCGQVVPDAL 562
A +I+ L Q Q +P L
Sbjct: 1051 APTLIKALTQSKQKIPPEL 1069
>gi|123455589|ref|XP_001315537.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121898217|gb|EAY03314.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 598
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 15/320 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++ V K I L GA Q LR P +V+TP
Sbjct: 198 GPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQANDLRHL-PSLVVATP 256
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ V+ LV+D D + IR+ IS T++F+
Sbjct: 257 GRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQTMMFSATWPKE 316
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
+ L+ ++ + N+ + + S I Q + C + EK+ K ++VL+ D
Sbjct: 317 IQQLAADFLVDPVHMIIGNKDLTTNSN-IKQVITKC-EEFEKLSKCLEVLNEHKDD---- 370
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K++ +L L KG+ + + ++ V R ++ D
Sbjct: 371 ---KIIIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLGKFRSCKKGILVATD 427
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ ++ + ++VI DF ++ YV + AR G+ +FFT ++ + ++ +I
Sbjct: 428 VAARGLDVNDIDIVINYDFPGDIETYVHRIGRTARGNKEGLAVTFFTDENKNMSRKLAKI 487
Query: 551 LEQCGQVVPDALRDLCHTSP 570
+ Q Q +PD L+ L +P
Sbjct: 488 MTQAKQELPDWLKALADVTP 507
>gi|240280856|gb|EER44360.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H143]
Length = 1200
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ + ++ E +
Sbjct: 585 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLLPMFRHIMDQRPLE--NME 636
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 637 GPIGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 695
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKPH--TVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G ++R + +P TV+F+
Sbjct: 696 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATF 755
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 756 PRNMEALARKTLAKPVEIIVGGKSVVAPE--ITQIVEVRNQDT-KFVRLLALLGELYADD 812
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 813 -KNEDARALIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRDSTIDDFKAG 865
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 866 VFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 925
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+ ++ L ++
Sbjct: 926 RYSVDISKALKQSGQPVPEPVQKLVNS 952
>gi|225559706|gb|EEH07988.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
capsulatus G186AR]
Length = 1201
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ + ++ E +
Sbjct: 587 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLLPMFRHIMDQRPLE--NME 638
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 639 GPIGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 697
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKPH--TVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G ++R + +P TV+F+
Sbjct: 698 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATF 757
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 758 PRNMEALARKTLAKPVEIIVGGKSVVAPE--ITQIVEVRNQDT-KFVRLLALLGELYADD 814
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 815 -KNEDARALIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRDSTIDDFKAG 867
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 868 VFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 927
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+ ++ L ++
Sbjct: 928 RYSVDISKALKQSGQPVPEPVQKLVNS 954
>gi|195403478|ref|XP_002060316.1| GJ16043 [Drosophila virilis]
gi|194140655|gb|EDW57129.1| GJ16043 [Drosophila virilis]
Length = 605
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++SV + + + G+ Q + L+ E +++TP
Sbjct: 194 GPIALVLAPTRELAQQIQSVANDFGSSSSVRNTCIFGGSPRTKQASDLQRGV-EIVIATP 252
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG--KPHTVVFNDCLTYT- 371
RLL + ++ + LV+D D + IR+ I G +P T+
Sbjct: 253 GRLLDFLQAGTTNLRRCTYLVLDEADRMMDMGFEPQIRK-IFGQIRPDRQTLMWSATWPK 311
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V + LG+ +++ S + I Q V VCA + EK K +L H Y +
Sbjct: 312 EVRQLAEDFLGNYIHINIGSMELSANHNIRQYVEVCA-EHEKGAKLKDLLSHIYDQA--A 368
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
P K++ V K L + G S+ + +++V D R A ++ D
Sbjct: 369 MPGKIIIFVATKKKVDKLARFINALGVSVGSIHGDKSQMDRDNVLNDFRSGRANILVATD 428
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ +++ + VI DF S ++Y+ + R+ +G ++FFT+ +A A +IE+
Sbjct: 429 VAARGLDIDGIKYVINFDFPQSSEDYIHRIGRTGRNRSTGTSYAFFTRKNAKCARALIEV 488
Query: 551 LEQCGQVV 558
L + Q+V
Sbjct: 489 LREANQIV 496
>gi|327278500|ref|XP_003224000.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Anolis
carolinensis]
Length = 1030
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 174/417 (41%), Gaps = 41/417 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + + +D++
Sbjct: 362 GKGCPK---PIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAI-----PAIMNGRDLIGI 413
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D +E EG P + + ++E A ++ CK K
Sbjct: 414 AKTGSGKTIAFLLPMFRHIMDQRPLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 468
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ +++ + ++ V+ +V+D
Sbjct: 469 TLGVRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLD 527
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 528 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILNKPIEVQVG 582
Query: 395 SQSA-CIIQSVNVCASDEE-KILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S C NV +EE K LK +++L H E V+ V K L+
Sbjct: 583 GRSVVCSDVEQNVIVIEEENKFLKLLELLGH------FQEQGAVIIFVDKQEHADGLLKD 636
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 LMRASYPCLSLHGGIDQYDRDSIIND-FKSGVCKLLVATSVAARGLDVKHLMLVINYSCP 695
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
++YV R G ++F T+D A +AG +I+ LE G VP L L +
Sbjct: 696 NHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTPVPSELEKLWN 752
>gi|157126121|ref|XP_001654546.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108873390|gb|EAT37615.1| AAEL010402-PA [Aedes aegypti]
Length = 741
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 154/372 (41%), Gaps = 36/372 (9%)
Query: 211 WKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W +D++ +T + + + + R E G GP +L + ++E
Sbjct: 354 WPVLLKGEDLIGIAQTGTGKTLAFLLPAFIHIEGQPVPRGEARG----GPNVLVMAPTRE 409
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ + I + L+ G QI ++ E +++TP RL LV+ ID
Sbjct: 410 LALQIEKEVFKYQFRDIKAICLYGGGDRRTQINKVKGGV-EIIIATPGRLNDLVAANVID 468
Query: 328 VSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---LLGS 383
++ ++ LV+D D L G + + + +P T+ P V+ L + +
Sbjct: 469 ITSITYLVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSATWP--PGVRRLAQSYMSN 526
Query: 384 INRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ-VLDHAYGDHFHSEPLKVLYIVGK 442
++ + + + + Q + V +E+K ++ + V + D KV+ G+
Sbjct: 527 PVQVYVGTLDLAATHTVTQQIEVI-DEEDKYMRVMNFVTNMGPSD-------KVIIFCGR 578
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSH------IKNSVEADGRKRPAVSMIDKDHISTA 496
++ +L S + +G NC H + D + +I D S
Sbjct: 579 KTRADDLSSEF------VLSGINCTSLHGDREQADREQALEDIKSGDVRVLIATDVASRG 632
Query: 497 -ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCG 555
++E+ V+ DF +++ YV + R SG+ SFFT+ D A A +I+ILE+
Sbjct: 633 LDIEDISHVVNYDFPRNIEEYVHRVGRTGRAGRSGVSLSFFTRGDWAVASDLIKILEEAD 692
Query: 556 QVVPDALRDLCH 567
Q VP+ +R +
Sbjct: 693 QEVPEEIRQMAE 704
>gi|392564654|gb|EIW57832.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 494
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 19/319 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALILAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ ++ ++ LV+D D + IR+ +S +P T++F+
Sbjct: 190 ATPGRLIDMLESGKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L ++++ + + I Q V V SD EK K I+ LD
Sbjct: 250 P-KDVQKLANDFLKDFIQVNIGSMELTANHSITQIVEVV-SDFEKRAKLIKHLDQ----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
E KVL VG ++ L+ G+ ++ V + + + +I
Sbjct: 303 ISQENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R +G ++FT D+A A ++
Sbjct: 363 ATDVASRGLDVKDVRYVINYDFPNNCEDYIHRIGRTGRAGTTGTSFTYFTTDNAKQAREL 422
Query: 548 IEILEQCGQVVPDALRDLC 566
I IL++ VVP L ++
Sbjct: 423 IGILKEAKAVVPPQLEEMS 441
>gi|324504040|gb|ADY41744.1| ATP-dependent RNA helicase DDX42 [Ascaris suum]
Length = 808
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 139/364 (38%), Gaps = 34/364 (9%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +D+L +GS T+ + + D KE +G P L +V ++E A +V
Sbjct: 309 SGRDVLGIAKTGSGKTVAYLWPAIVHIMDQPQLKEGDG-----PIALIVVPTRELAIQVY 363
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVS 332
K K + I V + G + Q L+ E +V+TP R++ LV ++A + + V+
Sbjct: 364 QEAKRFCKVYNIAVVCAYGGGSKWEQQNALKEGA-ELVVATPGRIIDLVKIEATNFTRVT 422
Query: 333 LLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLS---- 388
LV D D + + Q S H CL +++ + RL+
Sbjct: 423 FLVFDEADRMF---DMGFEAQVKSISDHIRPDRQCLMFSAT------FKAKVERLARDAL 473
Query: 389 ------LNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
+ V + +IQ+V V S + K +Q L KVL V K
Sbjct: 474 VDPVRIVQGEVGEANEDVIQNVEVLPSVDAKWRWLLQRLVQFLAQG------KVLIFVTK 527
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYE 502
+ + L+ +++ ++ +N RK A+ + ++ E
Sbjct: 528 KQNAEEVAQRLQTNDFALVLLHGDMLQAERNEKLHAFRKDTALMVATDVAARGLDIPEIR 587
Query: 503 VVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
VI D + +V + R G ++ T D AG ++ LE Q VPDAL
Sbjct: 588 TVINFDLARDIDTHVHRIGRTGRAGEKGYAYTLLTDADKEMAGHLVRNLESVNQTVPDAL 647
Query: 563 RDLC 566
L
Sbjct: 648 LQLA 651
>gi|449542335|gb|EMD33314.1| hypothetical protein CERSUDRAFT_117934 [Ceriporiopsis subvermispora
B]
Length = 514
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 19/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 169 GPIALILAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIVI 224
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ + ++ ++ LV+D D + IR+ +S +P T++F+
Sbjct: 225 ATPGRLIDMLETQKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 284
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L ++++ + + I Q V VC SD EK K I+ L+
Sbjct: 285 P-KDVQKLANDFLKDFIQVNIGSMELTANHNIQQIVEVC-SDFEKRAKLIKHLEQ----- 337
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL VG ++ L+ G+ ++ V ++ + + +I
Sbjct: 338 ISAENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLSEFKAGRSPILI 397
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R + G +++FT D+A A ++
Sbjct: 398 ATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKQAREL 457
Query: 548 IEILEQCGQVVPDALRDL 565
+ IL + +P L ++
Sbjct: 458 LAILREAKANIPPQLEEM 475
>gi|326482407|gb|EGE06417.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
equinum CBS 127.97]
Length = 1182
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 25/326 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ C+P LKA + V + GA I QI L+ E +V TP
Sbjct: 621 GPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 679
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + I +I TV+F+
Sbjct: 680 GRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATF 739
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D+ K ++ +++L + Y D
Sbjct: 740 PRNMEALARKTLSKPIEIIVGGRSVVAPE--ITQIVEV-RNDDAKFVRLLELLGNLYSDD 796
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 797 -ENEDARTLVFVDRQEAADRLLRDLMRKGYP------CMSIHGGKDQIDRDSTIDDFKAG 849
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 850 IFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 909
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCH 567
++ + + L+Q GQ VP+ ++ + +
Sbjct: 910 RYSVDISKALKQSGQPVPEPIQKMVN 935
>gi|198435916|ref|XP_002130991.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
[Ciona intestinalis]
Length = 1150
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 46/334 (13%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CK K+ +H V ++ G I QI L+ E +V TP
Sbjct: 563 GPIAVIMTPTRELALQITKECKKFTKSLKLHVVCVYGGTGISEQIAELKRG-AEIIVCTP 621
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTV-VFNDCLTY 370
R++ ++++ + ++ + LV+D D + + +P + V N C
Sbjct: 622 GRMIDMLTVNNGRVTNLRRCTYLVLDEADRMF----------DMGFEPQVMHVINSCR-- 669
Query: 371 TSVPAVQNLL--------LGSINRLSLNQSVASQSA-----C--IIQSVNVCASDEEKIL 415
P Q +L + ++ R LN+ V Q C + Q V + ++E+K L
Sbjct: 670 ---PDRQTVLFSATFPRQMEALARRILNKPVEVQVGGRSVVCSDVKQQV-LILTEEQKFL 725
Query: 416 KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSV 475
K +++L + E VL V K + L+ L K YS I + ++S+
Sbjct: 726 KLLELLGQ------YQEKGAVLVFVDKQERADYLLKELMDKSYSCMALHGGIDQYDRDSI 779
Query: 476 EADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILH 533
+D KR ++ ++ L+ +++V +F ++YV R G +
Sbjct: 780 ISDF-KRGVNQLLIATSVAARGLDVKNLILVVNFNCPNHYEDYVHRCGRTGRAGNKGFAY 838
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+F T+D A +AG++I+ LE VP L L +
Sbjct: 839 TFITQDQARYAGEIIKALELSLTKVPPDLEMLWN 872
>gi|409048419|gb|EKM57897.1| hypothetical protein PHACADRAFT_251816 [Phanerochaete carnosa
HHB-10118-sp]
Length = 506
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 19/319 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 159 GPIALILAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIVI 214
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ ++ ++ LV+D D + IR+ +S +P T++F+
Sbjct: 215 ATPGRLIDMLESGKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 274
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L ++++ + + + I Q + VC SD EK K I+ LD
Sbjct: 275 P-KDVQKLANDFLKDFIQVNIGSTELTANHNIQQIIEVC-SDFEKRSKLIKHLDQ----- 327
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
E KVL VG ++ L+ G+ ++ V ++ + + +I
Sbjct: 328 ISQENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLSEFKAGRSPILI 387
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ V+ DF + ++Y+ + R + G +++FT D+A A ++
Sbjct: 388 ATDVASRGLDVKDVGYVVNYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSAREL 447
Query: 548 IEILEQCGQVVPDALRDLC 566
I IL + VP L ++
Sbjct: 448 IGILREAKANVPTQLEEMA 466
>gi|326476402|gb|EGE00412.1| Pre-mRNA-processing ATP-dependent RNA helicase prp5 [Trichophyton
tonsurans CBS 112818]
Length = 1182
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 25/326 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ C+P LKA + V + GA I QI L+ E +V TP
Sbjct: 621 GPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 679
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + I +I TV+F+
Sbjct: 680 GRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATF 739
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D+ K ++ +++L + Y D
Sbjct: 740 PRNMEALARKTLSKPIEIIVGGRSVVAPE--ITQIVEV-RNDDAKFVRLLELLGNLYSDD 796
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 797 -ENEDARTLVFVDRQEAADRLLRDLMRKGYP------CMSIHGGKDQIDRDSTIDDFKAG 849
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 850 IFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 909
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCH 567
++ + + L+Q GQ VP+ ++ + +
Sbjct: 910 RYSVDISKALKQSGQPVPEPIQKMVN 935
>gi|315042594|ref|XP_003170673.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
gi|311344462|gb|EFR03665.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
Length = 1183
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 145/325 (44%), Gaps = 25/325 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ C+P LKA + V + GA I QI L+ E +V TP
Sbjct: 623 GPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 681
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + I +I TV+F+
Sbjct: 682 GRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATF 741
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D+ K ++ +++L + Y D
Sbjct: 742 PRNMEALARKTLSKPIEIIVGGRSVVAPE--ITQIVEV-RNDDAKFVRLLELLGNLYSDD 798
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 799 -ENEDARTLVFVDRQEAADRLLRDLMRKGYP------CMSIHGGKDQIDRDSTIDDFKAG 851
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 852 IFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 911
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
++ + + L+Q GQ VP+ ++ +
Sbjct: 912 RYSVDISKALKQSGQPVPEPVQKMV 936
>gi|70995215|ref|XP_752371.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
gi|74672743|sp|Q4WT99.1|PRP5_ASPFU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|66850006|gb|EAL90333.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
Length = 1211
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 170/387 (43%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ R ++ +
Sbjct: 596 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLIPMFRH--IRDQRPLENME 647
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 648 GPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 706
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 707 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 766
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V D K ++ +++L + Y D
Sbjct: 767 PRNMEALARKSLTKPIEIVVGGKSVVAPE--ITQIVEVRNEDT-KFVRLLEILGNLYSDD 823
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+ E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 824 AN-EDARALIFVDRQEAADTLLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 876
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T++
Sbjct: 877 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQE 936
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L Q GQ VP+ ++ + +
Sbjct: 937 RYSVDIAKALRQSGQKVPEPVQKMVDS 963
>gi|328781103|ref|XP_394925.4| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Apis
mellifera]
Length = 626
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 145/364 (39%), Gaps = 23/364 (6%)
Query: 211 WKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W S +D++ +T + + ++ I R E++G P +L + ++E
Sbjct: 245 WPILLSGRDLIGIAQTGTGKTLAFLLPALIHIEGQQIPRVERKG-----PNVLIMAPTRE 299
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ GI V L+ G + Q+ + E +++TP RL LV K ++
Sbjct: 300 LALQIEKEVNKYSYHGIKAVCLYGGGSRKKQVNVVTEG-VEIVIATPGRLNDLVEAKILN 358
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNLLLGSINR 386
+S ++ LV+D D + IR+++ +P +T + P L S +
Sbjct: 359 ISSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDR---QTVMTSATWPQGVRRLAQSYMK 415
Query: 387 LSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKD 443
+ V S + +V V DEE + D Y P KV+ GK
Sbjct: 416 NPIQVFVGSLDLATVHTVMQKVYIVDEE------EKTDMMYEFFRKMSPNDKVIIFFGKK 469
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYE 502
+K ++ S L + + + + D + ++ D S ++E+
Sbjct: 470 TKVDDVASDLALQSVNCQSIHGGREQSDREQALEDLKTGEVQILLATDVASRGIDIEDIT 529
Query: 503 VVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
V+ DF ++ YV + R SG +F T+ D HA +I ILE+ Q VP+ L
Sbjct: 530 HVLNYDFPRDIEEYVHRVGRTGRAGRSGESITFMTRKDWTHAKDLINILEEANQEVPEEL 589
Query: 563 RDLC 566
+
Sbjct: 590 YQMA 593
>gi|326491859|dbj|BAJ98154.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 786
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 159/373 (42%), Gaps = 40/373 (10%)
Query: 211 WKCYSSAKDILE--TSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +DI+ +GS T+ ++ + A ++++ P +L L ++E
Sbjct: 398 WPIARSGRDIIAIAETGSGKTL---SFGLPILAQILSKQNSTSGGKRTPLMLVLAPTREL 454
Query: 269 AAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A + VC+ A G+ T+ ++ G+ + + L++ + L++TP RL+ L+
Sbjct: 455 AMQTADVCEAAGATCGLKTLCVYGGSPREGNVKALKAGV-DLLIATPGRLIDLLQEGVAV 513
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ V LV+D D + IRQ I+ P T Q L+ + L
Sbjct: 514 LDKVQHLVLDEADRMLDMGFEPAIRQIIAAVPKTR--------------QTLMFSATWPL 559
Query: 388 SLNQSVASQSACIIQSVNVCASDEE--------KILKGIQVL-----DHAYGDHFH---- 430
S+ QS+A++ V + E+ ++ + ++V+ +H D H
Sbjct: 560 SI-QSLANEFLREPAKVTIGVKQEQSDGPTANRRVTQIVEVMTYRDKEHRLQDLLHKLHK 618
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
S ++L + + + TL+ KG+ + +++ R ++
Sbjct: 619 SRKNRILVFALYKKEAERIEQTLRRKGWKVQGIHGDKSQALRSKAIESFRSGEEPLLVAT 678
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D + ++ + E VI F +++++YV + R +G ++FFT +D HAG++ +
Sbjct: 679 DVAARGLDIPDVEYVINYTFPLTIEDYVHRIGRTGRAGKTGTAYTFFTDEDKTHAGELQQ 738
Query: 550 ILEQCGQVVPDAL 562
+L + Q +P L
Sbjct: 739 VLREANQDIPQDL 751
>gi|159131126|gb|EDP56239.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus A1163]
Length = 1211
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 170/387 (43%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ R ++ +
Sbjct: 596 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLIPMFRH--IRDQRPLENME 647
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 648 GPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 706
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 707 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 766
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V D K ++ +++L + Y D
Sbjct: 767 PRNMEALARKSLTKPIEIVVGGKSVVAPE--ITQIVEVRNEDT-KFVRLLEILGNLYSDD 823
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+ E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 824 AN-EDARALIFVDRQEAADTLLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 876
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T++
Sbjct: 877 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQE 936
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L Q GQ VP+ ++ + +
Sbjct: 937 RYSVDIAKALRQSGQKVPEPVQKMVDS 963
>gi|255078748|ref|XP_002502954.1| predicted protein [Micromonas sp. RCC299]
gi|226518220|gb|ACO64212.1| predicted protein [Micromonas sp. RCC299]
Length = 435
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 11/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K+ I + ++ GA + QI LR E V+TP
Sbjct: 121 GPIVLILAPTRELAVQIQEQAATFGKSSKIKSACIYGGAPRNAQIAALREGV-ELCVATP 179
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP--HTVVFNDCLTYT 371
RLL L++ KA ++ V+ V+D D L G + R +P T++F
Sbjct: 180 GRLLDLLNAKATNLRRVTYFVLDEADRMLDLGFEPQIRRVERLTRPDRQTLLFTATWP-A 238
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG--DHF 429
V A + + + S + Q V V D+ K K + L+ A G D
Sbjct: 239 EVAAAAGDFTNDVVTVRIGGEALRASDNVSQIVEVVDEDD-KHAKLVGWLERALGEADAG 297
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
P ++++ K ++ + L+ +G+ + + V + R + M+
Sbjct: 298 GWTPRVIVFLSSK-ARVDSATRRLRHEGFPALSIHGDKTQEEREWVLGEFRAGKSPVMLA 356
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + ++++ +VI DF M++YV + R G S F DA HA +
Sbjct: 357 TDVAARGLDVKDVSLVINYDFPAKMEDYVHRIGRTGRAGAKGAARSMFAAGDARHARSLC 416
Query: 549 EILEQCGQVVPDAL 562
+L+ GQ VP L
Sbjct: 417 GLLQTAGQPVPREL 430
>gi|357495793|ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493200|gb|AES74403.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 718
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 173/424 (40%), Gaps = 83/424 (19%)
Query: 176 SKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI 233
S F L ++NA G P+ SW I +KDI + +GS T+ +
Sbjct: 169 SGFPSEILREVQNA----GFSAPTPIQAQSWPIAL-----QSKDIVAIAKTGSGKTLGYL 219
Query: 234 --AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLH 290
A+I ++ A+ GP +L L ++E A +++ K K I L+
Sbjct: 220 LPAFIHLKRTNNNAK--------MGPTVLVLSPTRELATQIQDEAVKFSKTSRIACTCLY 271
Query: 291 PGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL 350
GA Q+ + + +V+TP RL ++ ++ I + VS LV+D D +
Sbjct: 272 GGAPKGPQLKDIDRGA-DIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQ 330
Query: 351 IRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASD 410
IR+ ++G VPA + L+ + + +A+ ++ V V +
Sbjct: 331 IRKIVNG---------------VPARRQTLMFTATWPKEVRRIAAD--LLVNPVQVNIGN 373
Query: 411 EEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI----STGSNC 466
++++ + H ++VL V K + + ++ + + +G I ST C
Sbjct: 374 VDELVANKSITQH----------IEVLTYVEKQRRLETILRS-QDQGSKIIIFCSTKKMC 422
Query: 467 --IVSHIKNSVEA---DGRKRPAVSMIDKDHI-------------------STAELEEYE 502
+ ++ A G K S D+DH+ ++++
Sbjct: 423 DQLARNLTRQFGAAAIHGDK----SQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIR 478
Query: 503 VVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
VV+ DF +++YV + R +GI ++FF DA HA +I+ILE Q VP L
Sbjct: 479 VVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPEL 538
Query: 563 RDLC 566
R+L
Sbjct: 539 RELS 542
>gi|221119958|ref|XP_002163544.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Hydra
magnipapillata]
Length = 745
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 19/319 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP L L ++E A ++ K GI +V ++ G QI +R E ++ TP
Sbjct: 346 GPSCLVLSPTRELAQQIEMEVKKFHYRGIRSVCIYGGGDRSAQINLVRQG-VEIIIGTPG 404
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L+ V V+ LV+D D L G + + + +P T+ P
Sbjct: 405 RLNDLLMNGFFSVKSVTYLVLDEADRMLDMGFEPEIKKILLDIRPDRQTIMTSATWP--P 462
Query: 375 AVQNLLLGSI-NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEP 433
VQ + + + + +N AC SV+ E+ K +V+D +
Sbjct: 463 GVQRMADKYLRDPIRINVGSLDLQAC--HSVSQLVEFIEQHEKQDRVMDFISA---MAPD 517
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI-----VSHIKNSVEADGRKRPAVSMI 488
K++ VG+ ++ S L KG +I G CI S + ++E D + A +I
Sbjct: 518 GKLIIFVGRKVTADDISSNLAMKGTNI--GIQCIHGDRDQSDREQALE-DMKTGAARVLI 574
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ V+ DF +++YV + R SG +F T++D H ++
Sbjct: 575 ATDVASRGLDIKDLTHVLNYDFPRHIEDYVHRIGRTGRAGRSGCALTFVTREDWMHVAKL 634
Query: 548 IEILEQCGQVVPDALRDLC 566
I I+E+ GQ VP+ L ++
Sbjct: 635 IPIMEEAGQEVPEELIEMA 653
>gi|1169228|sp|P46942.1|DB10_NICSY RecName: Full=ATP-dependent RNA helicase-like protein DB10
gi|563986|dbj|BAA03763.1| RNA helicase like protein DB10 [Nicotiana sylvestris]
Length = 607
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 168/398 (42%), Gaps = 47/398 (11%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
I M G P+ SW I +DI + +GS T+ +++
Sbjct: 156 IVREMHQAGFSAPTPIQAQSWPIAL-----QGRDIVAIAKTGSGKTL---GYLMPAFIHL 207
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGL 302
R++ GP +L L ++E A ++++ K K+ I L+ GA Q+ L
Sbjct: 208 QQRRKNPQL---GPTILVLSPTRELATQIQAEAVKFGKSSRISCTCLYGGAPKGPQLREL 264
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTV 362
S + +V+TP RL ++ ++ + + VS LV+D D + IR+ + P
Sbjct: 265 -SRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLDEADRMLDMGFEPQIRKIVKEVP--- 320
Query: 363 VFNDCLTYTSVPA------VQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDE--- 411
V L YT+ +LL+ S+ N ++++ VA++S I Q + V E
Sbjct: 321 VQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELVANKS--ITQHIEVVLPMEKQR 378
Query: 412 --EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVS 469
E+IL+ EP + I K + +S + + +
Sbjct: 379 RVEQILR-------------SKEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAIHGDKSQ 425
Query: 470 HIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTV 528
++ V + R + ++ D + ++++ VVI DF +++YV + R
Sbjct: 426 GERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGA 485
Query: 529 SGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
SG+ ++FF+ D+ HA ++++LE Q VP LRD+
Sbjct: 486 SGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMA 523
>gi|422295668|gb|EKU22967.1| dead box rna helicase [Nannochloropsis gaditana CCMP526]
Length = 599
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 141/366 (38%), Gaps = 45/366 (12%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTG-----PFLLFLV 263
W +DI+ +GS T+ I + R K G G P +L +
Sbjct: 228 WPVLMGGRDIIGIAETGSGKTLTFIL-------PGLERIRKAGAPDGGRAGHVPRMLVVA 280
Query: 264 SSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVS 322
++E A + V + + G+ ++ L G Q LR + LV+TP RL L+
Sbjct: 281 PTRELAMQSAEVIDGVVEGSGLRSICLFGGVPKQEQRQALRGGV-DILVATPGRLADLME 339
Query: 323 LKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSIS-----GKPHTVVFNDCLTYTSVPAVQ 377
D+S VS LV+D D + IR +S G+ T +F+ ++ A+
Sbjct: 340 EGECDLSRVSYLVLDEADRMLDQGFEQAIRGIVSHCVPRGRRQTALFSATWP-VAIQALA 398
Query: 378 NLLLGSINRLSL-NQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKV 436
L + ++++ + ++S V + E L+G+ H D+ +V
Sbjct: 399 GEFLENPVKVTIGGEDLSSNKRVQQVVEVVGEFEREGRLRGLLTQYHGRRDN------RV 452
Query: 437 LYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA 496
L F + S + + + V A G P V
Sbjct: 453 LVFALYKKAFMETRARATASPPSTKFKTKEVPLLVATDVAARGLDIPDV----------- 501
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
EVVI F +++++YV + R GI H+FF + D +AG ++ L Q GQ
Sbjct: 502 -----EVVINYSFPLTIEDYVHRIGRTGRAGKKGIAHTFFHQGDKGNAGALVNTLRQAGQ 556
Query: 557 VVPDAL 562
VP AL
Sbjct: 557 EVPPAL 562
>gi|440800980|gb|ELR22005.1| DEAD box RNA helicase [Acanthamoeba castellanii str. Neff]
Length = 596
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 144/323 (44%), Gaps = 35/323 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P +L + ++E A + V L A ++ ++ G + D Q+ LR + +V+TP
Sbjct: 254 PIVLVMSPTRELAMQTAEVAVELGSACNAKSICIYGGVSKDAQVRELRGG-VQIVVATPG 312
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
RLL LV+ A+ ++ V +V+D D + + D +++RQ + + T++F+
Sbjct: 313 RLLDLVNDGALTLASVDYIVLDEADRMLDLGFEEDIRNVMRQ-VKQQRQTLMFS-----A 366
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQ--SAC-----IIQSVNVCASDEEKILKGIQVLDHA 424
+ P + L + ++ SQ AC I++ ++ A D LD
Sbjct: 367 TWPQIIQKLASEFLASPVKVAIGSQDLQACKRVKQIVEVMDSHARDAR--------LDQL 418
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI-----VSHIKNSVEADG 479
+ ++ K++ V + + S L KG+ TG I + NS+++
Sbjct: 419 LRQYQKTKDTKLIIFVLYKKEAVRVESMLARKGW---TGIQAIHGDKHQNDRTNSLQSFK 475
Query: 480 RKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
R + + ++ + E VI F +++++YV + R G+ H+ FT
Sbjct: 476 TGRSPILIATDVAARGLDIPDVEYVINYSFPLTIEDYVHRIGRTGRAGKEGLAHTLFTDF 535
Query: 540 DAAHAGQMIEILEQCGQVVPDAL 562
D A AG+++ +L + GQ VP+ L
Sbjct: 536 DKARAGELVNVLREAGQEVPEKL 558
>gi|325185732|emb|CCA20213.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 551
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 47/406 (11%)
Query: 171 KLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL---ETSGSS 227
+L C +KFL +C +G E P+ W I S +DI+ ET
Sbjct: 143 ELKCDAKFLQIC----------NGFETPTPIQSQCWPILL-----SGRDIIGIAETGSGK 187
Query: 228 STIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVC-KPLKAFGIHT 286
+ I +V A+ S + + +L + ++E A + V K K+ +
Sbjct: 188 TFAFTIPGLVHLASQSSPKSKA-----VKARMLVVAPTRELAMQTAEVINKAGKSCNLRC 242
Query: 287 VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG 345
V L G A Q L+S + +V+TP RL LV+ + D++ V+ V+D D L G
Sbjct: 243 VCLFGGVAKHEQRRQLKSG-VDVIVATPGRLNDLVNERVCDLTNVTFTVLDEADRMLDDG 301
Query: 346 --DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQS 403
+ LI S+ + +F+ S+ + + L ++++ + S + Q
Sbjct: 302 FEKDIRLIMSSVHKESQIAMFSATWP-QSIQKLAHEFLHDPVKVTIGSDDLAASVSVTQI 360
Query: 404 VNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
V V D + + I L Y H+ + L +++++ K + + L+ +G+
Sbjct: 361 VEVI-EDRARDAR-IHALLQKY--HYTRKNLILIFVLYK-KEADRVERDLRYRGW----- 410
Query: 464 SNCIVSHIKNSVE-----ADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNY 516
NC H S + + K + ++ ++ L+ E VI F +++++Y
Sbjct: 411 -NCAAIHGDRSQQQRNEAVENFKSGDIPLLIATDVAARGLDIPGVEYVINYAFPLTIEDY 469
Query: 517 VEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
V + R GI H+FFT +D A AG+++ +L Q VP+AL
Sbjct: 470 VHRIGRTGRGGKKGIAHTFFTTNDKARAGELVNLLRDSSQDVPEAL 515
>gi|21355075|ref|NP_649767.1| CG7878 [Drosophila melanogaster]
gi|7298989|gb|AAF54192.1| CG7878 [Drosophila melanogaster]
gi|15291973|gb|AAK93255.1| LD33749p [Drosophila melanogaster]
gi|220946004|gb|ACL85545.1| CG7878-PA [synthetic construct]
gi|220955750|gb|ACL90418.1| CG7878-PA [synthetic construct]
Length = 703
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 16/317 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
G +L L ++E A ++ K G+ V ++ G + QI+ L E ++ TP
Sbjct: 357 GANVLVLAPTRELALQIEMEVKKYSFRGMKAVCVYGGGNRNMQISDLERG-AEIIICTPG 415
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L+ IDVS ++ LV+D D L G + + + +P +T + P
Sbjct: 416 RLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTI---MTSATWP 472
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPL 434
L S + + V S SV E + + + ++
Sbjct: 473 PGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTD-- 530
Query: 435 KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI----KNSVEADGRKRPAVSMIDK 490
K++ G+ + +L S L G+ + CI + + AD + ++
Sbjct: 531 KIIIFCGRKVRADDLSSELTLDGFM----TQCIHGNRDQMDREQAIADIKSGVVRILVAT 586
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D S ++E+ VI DF +++ YV + R G SFFT++D A A ++IE
Sbjct: 587 DVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIE 646
Query: 550 ILEQCGQVVPDALRDLC 566
IL++ Q VPD L ++
Sbjct: 647 ILQEAEQEVPDELHNMA 663
>gi|145355346|ref|XP_001421924.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582163|gb|ABP00218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 421
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 169/405 (41%), Gaps = 50/405 (12%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
+ A++ G + P+ +W I KD+ + +GS T + +A+
Sbjct: 14 LRAALKAQGYDAPTPIQAEAWPILL-----KGKDVVAIAKTGSGKTCGFLLPALASIMQL 68
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGAAIDHQITGL 302
+ + + G P ++ L ++E A ++ C K A G + L+ GAA Q+ L
Sbjct: 69 LDGRWRPGA--VTPTVIVLAPTRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRAL 126
Query: 303 RSCEPEFLVSTPERLLKLV--------SLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQS 354
RS + +V+TP RL + + A+ S V L DR+ + + I +
Sbjct: 127 RSGA-DVVVATPGRLNDFLEPPPGFTAPVSAVKASYVVLDEADRMLDMGFEPQIKKIFKL 185
Query: 355 ISGKPHTVVFNDCLTYTSVPAVQNLL-----------LGSI-NRLSLNQSVASQSACIIQ 402
TV+F T T AVQ + +GS ++L+ N+S I Q
Sbjct: 186 CPSARQTVMF----TATWPKAVQKIADSFTTKPIHIQIGSGGDKLTANKS-------ITQ 234
Query: 403 SVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIST 462
+V V +EEK + + +L G + G + L LK G+S +
Sbjct: 235 TVEVL-EEEEKFDRCVAILKKELGKD-----DTCIMFAGTKRRCDFLDRRLKQSGFSSAG 288
Query: 463 GSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEIL 520
+ + + D +R +++ ++ L+ V V+V DF + +++YV +
Sbjct: 289 AIHGDKDQYEREMVLDNFRRGRGNILVATDVAARGLDIPGVAAVLVYDFPLQVEDYVHRI 348
Query: 521 TSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
R G +FFTKD+ A ++I+IL+ GQ VP AL+ +
Sbjct: 349 GRTGRAGKEGKAFTFFTKDNRGAANELIDILQGAGQTVPLALQAM 393
>gi|194747363|ref|XP_001956121.1| GF24750 [Drosophila ananassae]
gi|190623403|gb|EDV38927.1| GF24750 [Drosophila ananassae]
Length = 613
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 8/318 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++SV + + + GA Q L + +++TP
Sbjct: 189 GPIALVLAPTRELAQQIQSVANDFGSSAYVRNTCIFGGAPRSRQANDLERGV-QIVIATP 247
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RLL + A ++ + LV+D D + IR+ + +P + T+
Sbjct: 248 GRLLDFLQGGATNLKRCTYLVLDEADRMLDMGFEQQIRKILGQIRPDRQILMWSATWPKE 307
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + LG+ ++++ S + I Q V VCA + EK K +L H Y +
Sbjct: 308 VRKLAEDFLGNYIQINIGSLELSANHNIRQFVEVCA-EHEKGGKLKDLLSHIYDQS--TS 364
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
P K++ V K L + G + + ++SV D R ++ D
Sbjct: 365 PGKIIIFVATKKKVDELARFINAFGVGVGSIHGDKSQMDRDSVLNDFRNGRHNILVATDV 424
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ +++ + VI DF S ++YV + R +G ++FFT+ +A A +IEIL
Sbjct: 425 AARGLDVDGIKYVINFDFPQSSEDYVHRIGRTGRKHSTGTSYAFFTRKNAKCARALIEIL 484
Query: 552 EQCGQVVPDALRDLCHTS 569
+ Q V L + S
Sbjct: 485 REANQNVNPELESMARDS 502
>gi|449662055|ref|XP_002163251.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Hydra
magnipapillata]
Length = 790
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 17/329 (5%)
Query: 249 KEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEP 307
KEG GP L ++E ++ S CK K + + +V+ + G + Q GL+
Sbjct: 345 KEG---DGPIALICAPTRELCQQINSECKRFGKCYNLRSVACYGGGSKWEQTKGLQQGA- 400
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVF 364
E +V TP RL+ L+ KA ++ V+ LV D D + +R ++ ++F
Sbjct: 401 EIVVCTPGRLIDLIKAKATNLLRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQCLLF 460
Query: 365 NDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ + +++L I R+ + + + + I+Q+V V S ++K +L H
Sbjct: 461 SATMKKKVEWLCRDILSDPI-RIVVGE-LGEANEDIVQAVEVMKSPQQKW---NWLLSHI 515
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
F S VL V K S + + + LK +GY + +N+V +++
Sbjct: 516 V--EFTSGG-SVLIFVTKKSNSEEVAANLKEQGYELGLIHGDFDQFERNNVLKQFKQKQF 572
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
+ ++ D + ++ + VI D + + + R GI ++ T D
Sbjct: 573 LILVATDVAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGIAYTLITPQDTHF 632
Query: 544 AGQMIEILEQCGQVVPDALRDLCHTSPML 572
A ++ LE Q VPD L DL +P
Sbjct: 633 AADLVRNLEGANQRVPDELLDLALKNPWF 661
>gi|340725165|ref|XP_003400944.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
terrestris]
Length = 605
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 136/323 (42%), Gaps = 26/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V +A G+ + GA Q L E ++TP
Sbjct: 186 GPIALILAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERG-VEICIATP 244
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 245 GRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 304
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V A+ L L++ S + IIQ V+VC + EK LK ++L + +
Sbjct: 305 VRALAEDFLTDYTHLNIGSLTLSANHNIIQIVDVC-QEFEKDLKLYRLLQEI----GNEK 359
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD--------GRKRPA 484
K + V K ++ ++ G+ + + KN E D GR A
Sbjct: 360 ENKTIIFVETKRKVDDITRNIRRDGWQALS-----IHGDKNQQERDHVLQEFKSGR---A 411
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++++ + VI D+ S ++Y+ + R +G ++FFT + H
Sbjct: 412 PILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKH 471
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
AG +IE+L + GQ + L ++
Sbjct: 472 AGDLIEVLREAGQNINPRLTEMA 494
>gi|302502646|ref|XP_003013284.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
gi|291176847|gb|EFE32644.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
Length = 1181
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 147/326 (45%), Gaps = 25/326 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ C+P LKA + V + GA I QI L+ E +V TP
Sbjct: 598 GPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 656
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ +V+D R+ + + I +I TV+F+
Sbjct: 657 GRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATF 716
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D+ K ++ +++L + Y D
Sbjct: 717 PRNMEALARKTLSKPIEIIVGGRSVVAPE--ITQIVEV-RNDDAKFVRLLELLGNLYSDD 773
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 774 -ENEDARTLVFVDRQEAADRLLRDLMRKGYP------CMSIHGGKDQIDRDSTIDDFKAG 826
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 827 IFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 886
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCH 567
++ + + L+Q GQ VP+ ++ + +
Sbjct: 887 RYSVDISKALKQSGQPVPEPIQKMVN 912
>gi|440632990|gb|ELR02909.1| hypothetical protein GMDG_01131 [Geomyces destructans 20631-21]
Length = 1194
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 148/327 (45%), Gaps = 33/327 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ KP LK+ + V + GA I QI L+ E +V TP
Sbjct: 632 GPIGLIMTPTRELATQIHKEAKPFLKSMNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 690
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKPH--TVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + G +++ + +P+ T++F+
Sbjct: 691 GRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANIRPNRQTIMFS--- 747
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + +V +S I Q V V D+ K ++ +++L Y
Sbjct: 748 --ATMPRIMDALAKKTLNDPVEITVGGRSVVAPEITQIVEVREEDD-KFIRLLELLGELY 804
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPA 484
E + L V + K +L+ L KGY C+ H K+ ++ D
Sbjct: 805 D---KDEDARTLVFVDRQEKADDLLKDLMRKGYP------CMSIHGGKDQIDRDSTIDDF 855
Query: 485 VSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ + I+T+ ++++ ++V+ D +++YV R +G +F T
Sbjct: 856 KAGVTPIMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITG 915
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDL 565
D ++ + + LEQ GQ VPD L ++
Sbjct: 916 DQEQYSVGISKALEQSGQPVPDRLNEM 942
>gi|357495795|ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 619
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 168/407 (41%), Gaps = 49/407 (12%)
Query: 176 SKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI 233
S F L ++NA G P+ SW I +KDI + +GS T+
Sbjct: 169 SGFPSEILREVQNA----GFSAPTPIQAQSWPIAL-----QSKDIVAIAKTGSGKTL--- 216
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPG 292
+++ I K + GP +L L ++E A +++ K K I L+ G
Sbjct: 217 GYLLPAF---IHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSKTSRIACTCLYGG 273
Query: 293 AAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR 352
A Q+ + + +V+TP RL ++ ++ I + VS LV+D D + IR
Sbjct: 274 APKGPQLKDIDRGA-DIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIR 332
Query: 353 QSISGKP---HTVVFNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVC 407
+ ++G P T++F +LL+ + N ++++ VA++S I Q + V
Sbjct: 333 KIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKS--ITQHIEVL 390
Query: 408 ASDE-----EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSIS 461
E E IL+ + K++ L L + G +
Sbjct: 391 TYVEKQRRLETILRS------------QDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAI 438
Query: 462 TG--SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEI 519
G S H+ N + GR P + D ++++ VV+ DF +++YV
Sbjct: 439 HGDKSQADRDHVLNQFRS-GRT-PVLVATDV-AARGLDVKDIRVVVNFDFPTGVEDYVHR 495
Query: 520 LTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ R +GI ++FF DA HA +I+ILE Q VP LR+L
Sbjct: 496 IGRTGRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELS 542
>gi|332028589|gb|EGI68626.1| Putative ATP-dependent RNA helicase DDX43 [Acromyrmex echinatior]
Length = 660
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 29/324 (8%)
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
TGP +L + ++E A ++ GI V ++ G QI + + +++TP
Sbjct: 324 TGPNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGNRKTQIDTVTKG-VQIVIATP 382
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSV 373
RL LV +DVS V+ L++D D + IR+++ G +P+ +T +
Sbjct: 383 GRLNDLVQANVLDVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPNRQT---VMTSATW 439
Query: 374 PAVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEKILKGIQVLDHAYGDHFH 430
P L S + + V S + SV A+++EK + H +
Sbjct: 440 PQGVRRLAQSYMKNPIQVFVGSLDLAAVHSVTQRIYMANEDEKT-----DMMHQFFQEMG 494
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR------KRPA 484
+ KV+ GK SK ++ S L T +C H + ++D K A
Sbjct: 495 PQD-KVIVFFGKKSKVDDVSSDLAL------TNIDCQSIH-GDRDQSDREQALEDLKTGA 546
Query: 485 VSMIDKDHISTA--ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
V ++ +++ ++E+ V+ DF ++ YV + R +G +F T+ D
Sbjct: 547 VQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRQDWH 606
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
HA +I+ILE+ Q VP+ + +
Sbjct: 607 HAKALIDILEEANQEVPEEIYKMA 630
>gi|400601996|gb|EJP69621.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 1195
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 164/368 (44%), Gaps = 38/368 (10%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +D++ +GS T+ + + D KE EG P L + ++E A ++
Sbjct: 592 SGRDVIGVAKTGSGKTMAFLLPMFRHIKDQPPLKESEG-----PVGLIMTPTRELATQIH 646
Query: 274 SVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVS 329
CKP LK G+ V + GA I QI L+ E +V TP R++ L++ + ++
Sbjct: 647 RDCKPFLKMMGMRAVCAYGGAPIRDQIAELKRGA-EIIVCTPGRMIDLLAANQGRVTNLR 705
Query: 330 GVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINR 386
V+ +V+D D + G +++ + +P T++F+ ++P + + L + +
Sbjct: 706 RVTYVVLDEADRMFDMGFEPQVMKIFANMRPDKQTILFS-----ATMPRIIDSLTKKVLK 760
Query: 387 LSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
+ +V +S A I+ + + K + +++L Y E + L V +
Sbjct: 761 SPVEITVGGRSVVAKEIEQIVEVRDENTKFHRVLELLGELYD---RDEDARSLIFVERQE 817
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR----KRPAVSMIDKDHISTAELE 499
K +L+ L KGY C+ H K+ V+ D K+ V ++ ++ L+
Sbjct: 818 KADDLLKELMVKGYP------CMSIHGGKDQVDRDSTISDFKKGVVPILVATSVAARGLD 871
Query: 500 --EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQV 557
+ ++VI D +++YV R +G+ +F T + + A + + LEQ Q
Sbjct: 872 VKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFITPEQESCAPGIAKALEQSEQP 931
Query: 558 VPDALRDL 565
VP+ L ++
Sbjct: 932 VPERLNEM 939
>gi|119495979|ref|XP_001264763.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143359979|sp|A1D373.1|PRP5_NEOFI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119412925|gb|EAW22866.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 1193
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 170/387 (43%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI A+++ R ++ +
Sbjct: 578 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTI---AFLIPMFRH--IRDQRPLENME 629
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 630 GPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 688
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 689 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 748
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V D K ++ +++L + Y D
Sbjct: 749 PRNMEALARKSLTKPIEIVVGGKSVVAPE--ITQIVEVRNEDT-KFVRLLEILGNLYSDD 805
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+ E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 806 AN-EDARALIFVDRQEAADTLLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 858
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T++
Sbjct: 859 IFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQE 918
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L Q GQ VP+ ++ + +
Sbjct: 919 RYSVDIAKALRQSGQKVPEPVQKMVDS 945
>gi|350412504|ref|XP_003489670.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Bombus
impatiens]
Length = 605
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 136/323 (42%), Gaps = 26/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V +A G+ + GA Q L E ++TP
Sbjct: 186 GPIALILAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERG-VEICIATP 244
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 245 GRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 304
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V A+ L L++ S + IIQ V+VC + EK LK ++L + +
Sbjct: 305 VRALAEDFLTDYTHLNIGSLTLSANHNIIQIVDVC-QEFEKDLKLYRLLQEI----GNEK 359
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD--------GRKRPA 484
K + V K ++ ++ G+ + + KN E D GR A
Sbjct: 360 ENKTIIFVETKRKVDDITRNIRRDGWQALS-----IHGDKNQQERDHVLQEFKSGR---A 411
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++++ + VI D+ S ++Y+ + R +G ++FFT + H
Sbjct: 412 PILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKH 471
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
AG +IE+L + GQ + L ++
Sbjct: 472 AGDLIEVLREAGQNINPRLTEMA 494
>gi|312374635|gb|EFR22148.1| hypothetical protein AND_15703 [Anopheles darlingi]
Length = 715
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 27/322 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A ++ + I V L+ G Q+ +RS E +++TP
Sbjct: 364 GPNVLVLAPTRELALQIEKEVSKYQFRDIKAVCLYGGGDRRAQMNVVRSGV-EIIIATPG 422
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYTS 372
RL LV ++VS ++ LV+D D + IR+ I TV +T +
Sbjct: 423 RLNDLVQEGVVNVSSITYLVLDEADRMLDMGFEPQIRKVLLDIRPDRQTV-----MTSAT 477
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNV---CASDEEK---ILKGIQVLDHAYG 426
P L S + V + + +V C +E+K I+K ++ +
Sbjct: 478 WPDGVRRLAQSYMHDPIQVYVGTLDLAAVHTVTQHIECLDEEDKYHRIMKFVKQM----- 532
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP KV+ GK ++ +L S + + D +K
Sbjct: 533 -----EPKDKVIIFCGKKTRADDLSSEFVLNDIGCQSIHGNREQADREQALEDIKKGTVR 587
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+I D S ++E+ V+ DF +++ YV + R +G SF T+ D A A
Sbjct: 588 ILIATDVASRGLDIEDITHVVNYDFPRNIEEYVHRVGRTGRAGRTGTSLSFVTRSDWAVA 647
Query: 545 GQMIEILEQCGQVVPDALRDLC 566
++I+ILE+ Q VPD +RD+
Sbjct: 648 AELIKILEEAQQEVPDEIRDMA 669
>gi|195170555|ref|XP_002026077.1| GL16096 [Drosophila persimilis]
gi|194110957|gb|EDW33000.1| GL16096 [Drosophila persimilis]
Length = 554
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 140/333 (42%), Gaps = 27/333 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL--KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
GP L L ++E A +++SV AF + + GA Q + L+ E +++T
Sbjct: 176 GPIALVLAPTRELAQQIQSVANDFGSSAF-VRNTCVFGGAPRSKQASDLKRGV-EIIIAT 233
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT- 371
P RLL + A ++ + LV+D D + IR+ + +P + T+
Sbjct: 234 PGRLLDFLQSGATNLRRCTYLVLDEADRMLDMGFEPQIRKVLGQIRPDRQILMWSATWPK 293
Query: 372 SVPAVQNLLLGSINRLSLNQ------------SVASQSAC-----IIQSVNVCASDEEKI 414
V + LGS ++S Q S + +C I Q V VC + EK
Sbjct: 294 EVRQLAEDFLGSYIQVSRVQILRIQIETLSARSTSGPWSCRPNHNIRQYVEVCG-EHEKS 352
Query: 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS 474
K +L H Y D H+ P K++ V K L + G S+ + ++S
Sbjct: 353 AKLKDLLSHIY-DQAHA-PGKIIIFVATKKKTDELARFINAFGVSVGSIHGDKSQMDRDS 410
Query: 475 VEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
V D R A ++ D + +++ + VI D+ S ++Y+ + R G +
Sbjct: 411 VLNDFRSGRANILVATDVAARGLDVDGIKYVINFDYPQSSEDYIHRIGRTGRKLSKGTSY 470
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+FFT+ +A A +I+IL + Q V L +L
Sbjct: 471 AFFTRKNARCARALIDILREANQNVNPELENLA 503
>gi|327292871|ref|XP_003231133.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
gi|326466763|gb|EGD92216.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
Length = 1180
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 146/326 (44%), Gaps = 25/326 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ C+P LKA + V + GA I QI L+ E +V TP
Sbjct: 620 GPISVIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 678
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + I +I TV+F+
Sbjct: 679 GRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATF 738
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D+ K ++ +++L + Y D
Sbjct: 739 PRNMEALARKTLSKPIEIIVGGRSVVAPE--ITQIVEV-RNDDAKFVRLLELLGNLYSDD 795
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 796 -ENEDARTLVFVDRQEAADRLLRDLMRKGYP------CMSIHGGKDQIDRDSTIDDFKAG 848
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 849 IFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 908
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCH 567
++ + + L+Q GQ VP+ ++ + +
Sbjct: 909 RYSVDISKALKQSGQPVPEPIQKMVN 934
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 174/416 (41%), Gaps = 43/416 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ +A++ G D P + + I S +D++
Sbjct: 359 GKGCPK---PIKTWVQCGVSMKILSALKKQGY--DKPTPIQAQAI---PAIMSGRDLIGI 410
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D +E EG P + + ++E A ++ CK K
Sbjct: 411 AKTGSGKTIAFLLPMFRHIMDQRPLEESEG-----PISVIMTPTRELALQITKECKKFSK 465
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
A G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ + +V+D
Sbjct: 466 ALGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLGANSGRVTNLRRATYVVLD 524
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 525 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 579
Query: 395 SQSAC---IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+S + Q V V D+ K LK +++L H + E V+ V K L+
Sbjct: 580 GRSVVCSDVEQHVLVIEEDQ-KFLKLLEILGH------YQEKGSVIIFVDKQEHADGLLK 632
Query: 452 TLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFII 511
L Y + I + ++S+ D K ++ ++ L+ ++++V ++
Sbjct: 633 DLMKASYPCLSLHGGIDQYDRDSIIND-FKNGVCRLMVATSVAARGLDVKQLILVVNYNC 691
Query: 512 S--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D +AG +I+ LE G VP L L
Sbjct: 692 PNHYEDYVHRAGRTGRAGNKGYAYTFITEDQVRYAGDIIKGLELSGAPVPPELEQL 747
>gi|391865375|gb|EIT74659.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 1186
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 37/333 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 627 GPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 685
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 686 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILANVRPDKQTVLFSATF 745
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVA------SQSACIIQSVNVCASDEEKILKGIQVLD 422
+ ++ R +LN+ V S A I + S+++K ++ +++L
Sbjct: 746 PRN---------MEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLG 796
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRK 481
+ Y +E + L V + L+ L KGY C+ H K+ ++ D
Sbjct: 797 NLYSTD-ENEDARALIFVERQEGADTLLRELMRKGYP------CMSIHGGKDQIDRDSTI 849
Query: 482 RPAVSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ I I+T+ ++++ ++V+ D +++YV R +G +F
Sbjct: 850 EDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTF 909
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
T+D ++ + + L+Q GQ VP+ ++ + +
Sbjct: 910 LTEDQERYSVDIAKALKQSGQSVPEPVQKMVDS 942
>gi|357603533|gb|EHJ63818.1| DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 521
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 163/383 (42%), Gaps = 40/383 (10%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFS 253
G +Q +P+ +W I I +T + + ++ +I R+E+EG
Sbjct: 132 GFKQPSPIQSQAWPILLRG--DDMIGIAQTGTGKTLAFLLPALIHIDGQTIPREEREG-- 187
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEP--EFLV 311
P +L L ++E A ++ + GI +V L+ G QI + C+ + ++
Sbjct: 188 ---PTVLILAPTRELALQIEKETLKYQYKGITSVCLYGGGDRKEQI---KMCKGGVDIVI 241
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL LV + +++ S +V+D D + IR+S+ +P +T
Sbjct: 242 ATPGRLNDLVLARHLNIINFSYIVLDEADRMLDMGFEPQIRKSLYDVRPDR---QTVMTS 298
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEK---ILKGIQVLDHA 424
+ PA L S + + +V S + +V V +++K + + IQ +D
Sbjct: 299 ATWPAGVRRLAESYMKDPIQVNVGSLDLAAVHTVTQKIVFLEEDDKEAALFEFIQNMDKN 358
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRK 481
KV+ GK + +++ + L KG S+ I DG
Sbjct: 359 D---------KVIIFCGKKATARHISTELCLKGIECQSLHGDREQIDREAALEEMVDG-- 407
Query: 482 RPAVSMIDKDHIST--AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
V+++ +++ ++++ V+ DF ++ YV + R +GI SF T+
Sbjct: 408 --TVNILVATDVASRGIDIKDLTHVVNLDFPRHIEEYVHRVGRTGRAGKTGISLSFITRQ 465
Query: 540 DAAHAGQMIEILEQCGQVVPDAL 562
D AHA +I+ILE+ Q +PD L
Sbjct: 466 DWAHAQDLIKILEEANQEIPDEL 488
>gi|296807861|ref|XP_002844269.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
gi|238843752|gb|EEQ33414.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
Length = 1183
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 25/325 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ C+P LKA + V + GA I QI L+ E +V TP
Sbjct: 623 GPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 681
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + I +I TV+F+
Sbjct: 682 GRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATF 741
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V +D+ K ++ +++L + Y D
Sbjct: 742 PRNMEALARKTLSKPVEIIVGGRSVVAPE--ITQIVEV-RNDDAKFVRLLELLGNLYSDD 798
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 799 -ENEDARTLVFVDRQEAADRLLRDLMRKGYP------CMSIHGGKDQIDRDSTIDDFKAG 851
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 852 IFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 911
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
++ + + L+Q GQ VP+ ++ +
Sbjct: 912 RYSVDISKALKQSGQPVPEPIQKMV 936
>gi|75287517|sp|Q5VQL1.1|RH14_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 14
gi|55296348|dbj|BAD68264.1| putative p68 RNA helicase [Oryza sativa Japonica Group]
gi|222617825|gb|EEE53957.1| hypothetical protein OsJ_00557 [Oryza sativa Japonica Group]
gi|240065031|gb|ACS44654.1| ATP-dependent RNA helicase DB10 [Oryza sativa Japonica Group]
gi|240065056|gb|ACS44655.1| ATP-dependent RNA helicase DB10 [Oryza sativa Indica Group]
Length = 708
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K ++ I +V L+ GA Q+ L + +V+TP
Sbjct: 252 GPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGA-DIVVATP 310
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL ++ ++ + + VS LV+D D + IR+ + K T++F
Sbjct: 311 GRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKE 370
Query: 372 SVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
+LL + N + +Q VA++S I Q V+V + EK + Q+L
Sbjct: 371 VRKIASDLLSNPVQVNIGNTDQLVANKS--ITQYVDVI-TPPEKSRRLDQILRS------ 421
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
EP + I + + ++ + Y S ++SV ++ R ++
Sbjct: 422 -QEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 480
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + ++++ VV+ DF +++YV + R +G+ ++FF D+ +A ++
Sbjct: 481 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLV 540
Query: 549 EILEQCGQVVPDALRDLC 566
+ILE Q V LRD+
Sbjct: 541 KILEGANQSVSQQLRDMV 558
>gi|346322147|gb|EGX91746.1| DEAD/DEAH box RNA helicase [Cordyceps militaris CM01]
Length = 1216
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK GI V + GA I QI L+ E +V TP
Sbjct: 653 GPIGLIMSPTRELATQIHRDCKPFLKMMGIRAVCAYGGAPIREQIAELKRGA-EIIVCTP 711
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 712 GRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDKQTILFS--- 768
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
++P + + L + + +V +S A I+ + + K + +++L Y
Sbjct: 769 --ATMPRIIDSLTKKVLNSPVEITVGGRSVVAKEIEQIVEVRDENTKFHRVLELLGELY- 825
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
+ E + L V + K +L+ L KGY SI G + I ++S +D +K
Sbjct: 826 --ENDEDARTLIFVERQEKADDLLKELMVKGYPCMSIHGGKDQI---DRDSTISDFKKG- 879
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ + ++VI D +++YV R +G+ +F T +
Sbjct: 880 VVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFITPEQE 939
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
+ A + + LEQ Q VP+ L ++
Sbjct: 940 SCAPGIAKALEQSEQPVPERLSEM 963
>gi|121701983|ref|XP_001269256.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359917|sp|A1CQA9.1|PRP5_ASPCL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119397399|gb|EAW07830.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 1192
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 147/327 (44%), Gaps = 25/327 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 630 GPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIVVCTP 688
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 689 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 748
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V D K ++ +++L + Y D
Sbjct: 749 PRNMEALARKALTKPIEIIVGGRSVVAPE--ITQIVEVRNEDT-KFVRLLEILGNLYSDD 805
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+ E + L V + L+ L KGY C+ H K+ ++ D +
Sbjct: 806 AN-EDARSLIFVERQEAADALLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 858
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T++
Sbjct: 859 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQE 918
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+ ++ + +
Sbjct: 919 RYSVDIAKALKQSGQQVPEPVQKMVDS 945
>gi|393241453|gb|EJD48975.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 531
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 19/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A ++++ C FG I +++ GA QI L+ E ++
Sbjct: 176 GPIALVLAPTRELAVQIQTECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIVI 231
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ + ++ ++ LV+D D + IR+ +S +P T++F+
Sbjct: 232 ATPGRLIDMLESQKTNLRRITYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 291
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
Q+ L I ++++ + + I Q V VC +D EK K I+ L+
Sbjct: 292 PKDVQKLAQDFLKDYI-QVNIGSMELAANHNIKQIVEVC-TDFEKRGKLIKHLEQ----- 344
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL VG ++ L+ G+ ++ V + + + +I
Sbjct: 345 ISNENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKASRSPILI 404
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R + G +++FT D++ A ++
Sbjct: 405 ATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTAYTYFTTDNSKAAREL 464
Query: 548 IEILEQCGQVVPDALRDL 565
+ IL + Q +P L ++
Sbjct: 465 LGILREAKQEIPPQLEEM 482
>gi|380027508|ref|XP_003697465.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 607
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 134/315 (42%), Gaps = 10/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V +A G+ + GA Q L E ++TP
Sbjct: 186 GPIALILAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERG-VEICIATP 244
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 245 GRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 304
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V A+ L L++ S + IIQ V+VC + EK LK ++L + +
Sbjct: 305 VRALAEDFLSDYMHLNIGSLTLSANHNIIQIVDVC-QEFEKDLKLYRLLQEI----GNEK 359
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V K ++ ++ G+ + ++ V + + A ++ D
Sbjct: 360 ENKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDV 419
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++++ + VI D+ S ++Y+ + R +G ++FFT + HAG +IE+L
Sbjct: 420 AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL 479
Query: 552 EQCGQVVPDALRDLC 566
+ GQ + L ++
Sbjct: 480 REAGQNINPRLTEMA 494
>gi|241949729|ref|XP_002417587.1| ATP-dependent, RNA helicase, putative [Candida dubliniensis CD36]
gi|223640925|emb|CAX45242.1| ATP-dependent, RNA helicase, putative [Candida dubliniensis CD36]
Length = 538
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 26/293 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G++ V+++ G + D QI L++ +V+TP RL+ L++ AI++ V+ LV+D D
Sbjct: 225 GVNCVAVYGGVSKDDQIRKLKTAN--VVVATPGRLVDLINDGAINLGNVNYLVLDEADRM 282
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL-------LGSINRLSLNQ 391
L KG D ++I + + K T++F N + +G + LS N+
Sbjct: 283 LEKGFEEDIKTIISNTNNAKRQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANK 342
Query: 392 SVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD-SKFQNLV 450
+ I++ +N D+EK L IQ+L + + + + K+ S+ +N
Sbjct: 343 RITQ----IVEVIN--KFDKEKKL--IQLLRKYNANESSDNKILIFALYKKEASRIENF- 393
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDF 509
LK +S++ + + + + + + ++ D + ++ +VVI F
Sbjct: 394 --LKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTF 451
Query: 510 IISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++++YV + R G H+ FT+D+ +G + IL Q VPD L
Sbjct: 452 PLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPDEL 504
>gi|238498592|ref|XP_002380531.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
gi|220693805|gb|EED50150.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
Length = 1201
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 37/333 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 642 GPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 700
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 701 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILANVRPDKQTVLFSATF 760
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVA------SQSACIIQSVNVCASDEEKILKGIQVLD 422
+ ++ R +LN+ V S A I + S+++K ++ +++L
Sbjct: 761 PRN---------MEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLG 811
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRK 481
+ Y +E + L V + L+ L KGY C+ H K+ ++ D
Sbjct: 812 NLYSTD-ENEDARALIFVERQEGADTLLRELMRKGYP------CMSIHGGKDQIDRDSTI 864
Query: 482 RPAVSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ I I+T+ ++++ ++V+ D +++YV R +G +F
Sbjct: 865 EDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTF 924
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
T+D ++ + + L+Q GQ VP+ ++ + +
Sbjct: 925 LTEDQERYSVDIAKALKQSGQSVPEPVQKMVDS 957
>gi|380491708|emb|CCF35128.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 1206
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 147/327 (44%), Gaps = 33/327 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA G+ +V + GA I QI L+ E +V TP
Sbjct: 656 GPIGLIMTPTRELAVQIHRDCKPFLKAMGLRSVCAYGGAPIRDQIAELKRGA-EIVVCTP 714
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ V+D D + G +++ + +P T++F+
Sbjct: 715 GRMIDLLAANQGRVTNLRRVTYAVLDEADRMFDMGFEPQVMKIFANIRPDRQTILFS--- 771
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + + + +V +S I Q V + D+ K + +L Y
Sbjct: 772 --ATMPRIIDSLTKKVLKSPVEITVGGRSVVASDITQVVEIVPEDQ-KFYHLLGLLGELY 828
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR---- 480
E + L V + K +L+ L KGY C+ H K+ V+ D
Sbjct: 829 D---KDEDARSLIFVERQEKADDLLKELMTKGYP------CMSIHGGKDQVDRDSTISDF 879
Query: 481 KRPAVSMIDKDHISTAELEEYEVVIVPDFIISM--KNYVEILTSMARHTVSGILHSFFTK 538
K+ V ++ ++ L+ ++ +V +F ++YV R G ++ T+
Sbjct: 880 KKGIVPILIATSVAARGLDVKQLKLVVNFDCPSHSEDYVHRCGRTGRAGNKGTAVTYITE 939
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDL 565
+ + A + + LEQ GQ VP+ L ++
Sbjct: 940 EQESCASAVAKALEQSGQPVPERLEEM 966
>gi|390178042|ref|XP_001358660.3| GA20653 [Drosophila pseudoobscura pseudoobscura]
gi|388859301|gb|EAL27801.3| GA20653 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 155/380 (40%), Gaps = 25/380 (6%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFS 253
G + +P+ +W I K + I +T + + ++ T SI R ++ G +
Sbjct: 277 GFPKPSPIQSQAWPI-LLKGHDMIG-IAQTGTGKTLAFLLPGMIHTEYQSIPRGQRGGAN 334
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
+L L ++E A ++ K + V ++ G QI+ + E ++ T
Sbjct: 335 -----VLVLAPTRELALQIEMEVKKYSFRDMRAVCVYGGGCRRMQISDVERG-AEIIICT 388
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS 372
P RL LV K IDVS ++ LV+D D + IR+ + +P T+
Sbjct: 389 PGRLNDLVQAKVIDVSSITYLVLDEADRMLDMGFEPQIRKVLMDIRPDRQTIMTSATWP- 447
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG--DHF- 429
P V+ L +N + V S SV +++++ ++ YG F
Sbjct: 448 -PGVRRLAQSYMNN-PIQVCVGSLDLAATHSV-------KQVIELLEDESEKYGIIKSFI 498
Query: 430 --HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
++ K++ G+ ++ +L S L G+ + AD + +
Sbjct: 499 KNMTKTDKIIVFCGRKARADDLSSDLTLDGFMTQCIHGSRDQSDREQAIADIKSGVVRIL 558
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ VI DF +++ YV + R +G SF T+ D A +
Sbjct: 559 IATDVASRGLDIEDISHVINYDFPRNIEEYVHRVGRTGRAGRTGTSISFITRSDWGMAQE 618
Query: 547 MIEILEQCGQVVPDALRDLC 566
+I ILE+ QVVP+ L +
Sbjct: 619 LINILEEADQVVPEQLHSMA 638
>gi|169781778|ref|XP_001825352.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
oryzae RIB40]
gi|91207409|sp|Q2U2J6.1|PRP5_ASPOR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|83774094|dbj|BAE64219.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1186
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 150/333 (45%), Gaps = 37/333 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 627 GPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIIVCTP 685
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 686 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILANVRPDKQTVLFSATF 745
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVA------SQSACIIQSVNVCASDEEKILKGIQVLD 422
+ ++ R +LN+ V S A I + S+++K ++ +++L
Sbjct: 746 PRN---------MEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLG 796
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRK 481
+ Y +E + L V + L+ L KGY C+ H K+ ++ D
Sbjct: 797 NLYSTD-ENEDARALIFVERQEGADTLLRELMRKGYP------CMSIHGGKDQIDRDSTI 849
Query: 482 RPAVSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ I I+T+ ++++ ++V+ D +++YV R +G +F
Sbjct: 850 EDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTF 909
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
T+D ++ + + L+Q GQ VP+ ++ + +
Sbjct: 910 LTEDQERYSVDIAKALKQSGQSVPEPVQKMVDS 942
>gi|218187595|gb|EEC70022.1| hypothetical protein OsI_00586 [Oryza sativa Indica Group]
Length = 754
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K ++ I +V L+ GA Q+ L + +V+TP
Sbjct: 299 GPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGA-DIVVATP 357
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL ++ ++ + + VS LV+D D + IR+ + K T++F
Sbjct: 358 GRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKE 417
Query: 372 SVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
+LL + N + +Q VA++S I Q V+V + EK + Q+L
Sbjct: 418 VRKIASDLLSNPVQVNIGNTDQLVANKS--ITQYVDVI-TPPEKSRRLDQILRS------ 468
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
EP + I + + ++ + Y S ++SV ++ R ++
Sbjct: 469 -QEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 527
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + ++++ VV+ DF +++YV + R +G+ ++FF D+ +A ++
Sbjct: 528 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLV 587
Query: 549 EILEQCGQVVPDALRDLC 566
+ILE Q V LRD+
Sbjct: 588 KILEGANQSVSQQLRDMV 605
>gi|15230730|ref|NP_187299.1| DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana]
gi|75313790|sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40
gi|6437557|gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana]
gi|332640879|gb|AEE74400.1| DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana]
Length = 1088
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 147/349 (42%), Gaps = 74/349 (21%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPE 308
S GP +L L ++E A +++ L+ FG I L+ GA Q+ L +
Sbjct: 504 SRNGPTVLILAPTRELATQIQDEA--LR-FGRSSRISCTCLYGGAPKGPQLKELERGA-D 559
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFN 365
+V+TP RL ++ +K ID VSLLV+D D + IR+ ++ P T+++
Sbjct: 560 IVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYT 619
Query: 366 DCLTYTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDE-----EK 413
+LL +G ++ L+ N++ I Q V V E E+
Sbjct: 620 ATWPKEVRKIASDLLVNPVQVNIGRVDELAANKA-------ITQYVEVVPQMEKERRLEQ 672
Query: 414 ILK----GIQVL---------DH---AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKG 457
IL+ G +V+ DH + G HF + +V K Q + +
Sbjct: 673 ILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGA-------VVIHGDKTQGERDWVLNQ- 724
Query: 458 YSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYV 517
+G +C++ I V A G ++++ VVI DF +++YV
Sbjct: 725 --FRSGKSCVL--IATDVAARG----------------LDIKDIRVVINYDFPTGVEDYV 764
Query: 518 EILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ R +G+ +FFT+ D +A +I++LE Q VP +RD+
Sbjct: 765 HRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIA 813
>gi|5059027|gb|AAD38874.1|AF110007_1 p68 RNA helicase [Molgula oculata]
gi|5059032|gb|AAD38877.1|AF110009_1 p68 RNA helicase [Molgula oculata]
Length = 618
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 144/326 (44%), Gaps = 28/326 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP +L L ++E A +V+ V FG I ++ GA+ Q+ L R CE +
Sbjct: 220 GPIVLVLCPTRELAQQVQQVAA---EFGSSSHIKNTCVYGGASKGPQLRDLERGCE--IV 274
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ + K ++ + LV+D D + IR+ IS +P T
Sbjct: 275 IATPGRLIDFLEQKKTNLRRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSAT 334
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ V + LG + + + S + I+Q V+VC EK K +++++ G+
Sbjct: 335 WPKEVSKLAADFLGDFVHVQVGSTGLSANHNILQIVDVCQP-MEKDEKLMRLMEEIMGE- 392
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRP 483
SE +++ K + L T++ G+ + CI K+ E D R
Sbjct: 393 --SENKTIIFTETK-RRCDELTRTMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGR 444
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
+ ++ D S ++ + + VI DF ++YV + AR G ++FFT D+A
Sbjct: 445 SPILVATDVASRGLDVSDVKFVINYDFPSQCEDYVHRIGRTARAEQKGTAYTFFTYDNAK 504
Query: 543 HAGQMIEILEQCGQVVPDALRDLCHT 568
A +I IL++ Q V L +L T
Sbjct: 505 QAKDLIAILQEAKQAVNPKLMELGMT 530
>gi|258570243|ref|XP_002543925.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
gi|237904195|gb|EEP78596.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
Length = 1206
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 146/326 (44%), Gaps = 27/326 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 643 GPVGLVMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 701
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLS----KGDTLSLIRQSISGKPHTVVFNDC 367
R++ L+ S + ++ V+ +V+D D + + + +I +I +V+F+
Sbjct: 702 GRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKII-GNIRPSRQSVLFSAT 760
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ L + + +SV + I Q V V + K ++ +++L + Y D
Sbjct: 761 FPRNMEALARKTLTKPVEIIVGGRSVVAPE--ITQIVEV-RPENTKFVRLLELLGNLYSD 817
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVS 486
+ E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 818 DAN-EDARALIFVDRQEAADGLLRDLMRKGYP------CMSIHGGKDQVDRDSTIDDFKA 870
Query: 487 MIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
I I+T+ ++++ ++VI D +++YV R +G +F T++
Sbjct: 871 GIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQ 930
Query: 541 AAHAGQMIEILEQCGQVVPDALRDLC 566
++ + + L+Q GQ VPDA++ +
Sbjct: 931 ERYSVDIAKALKQSGQPVPDAVQKMV 956
>gi|344302066|gb|EGW32371.1| ATP-dependent RNA helicase DBP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 554
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 29/323 (8%)
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
TG +L + ++E A ++ L A I+ V+++ G + D QI LR+ +V+T
Sbjct: 212 TGLRVLCISPTRELALQIYDNLVDLTANTSINCVAIYGGVSKDDQIKKLRNAN--VVVAT 269
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL- 368
P RLL L++ A+D+S + LV+D D L KG D ++I + + T++F
Sbjct: 270 PGRLLDLINDGAVDLSDIDYLVLDEADRMLEKGFEEDIKAIIGNTKAESRQTLMFTATWP 329
Query: 369 --------TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQV 420
T+ PA + +G + LS N+ + +Q ++Q D+EKIL + +
Sbjct: 330 KEVRELANTFMKTPA--KVSIGDRDELSANKRI-TQIVEVVQRF-----DKEKILLNL-L 380
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
+ G H K+L + + LK Y ++ + + +
Sbjct: 381 RKYQSGSHKDD---KILIFALYKKEAGRIEMLLKRNNYRVAAIHGDLSQQQRTQALGAFK 437
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ ++ D + ++ +VVI F +++++YV + R +GI H+ FT++
Sbjct: 438 SGESSLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEE 497
Query: 540 DAAHAGQMIEILEQCGQVVPDAL 562
+ +G + +L Q VPD L
Sbjct: 498 EKHLSGALCNVLRSANQPVPDEL 520
>gi|409078207|gb|EKM78570.1| hypothetical protein AGABI1DRAFT_100622 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 494
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 142/322 (44%), Gaps = 19/322 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E +
Sbjct: 134 GPIALILAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIAI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ ++ ++ LV+D D + IR+ + +P T++F+
Sbjct: 190 ATPGRLIDMLESGKTNLKRITYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + + L + ++++ + + I Q V VC SD EK K I+ LD
Sbjct: 250 P-KDVQKLASDFLKDMIQVNIGSMDLTANHNIQQIVEVC-SDFEKRSKLIKHLDQ----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL VG ++ L+ G+ ++ V + + + +I
Sbjct: 303 ISAENAKVLIFVGTKRIADDITKYLRTDGWPALAIHGDKEQRERDWVLGEFKAGRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R + G +++FT ++A A ++
Sbjct: 363 ATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGLKGTSYTYFTTENAKAAREL 422
Query: 548 IEILEQCGQVVPDALRDLCHTS 569
I IL + V+P L ++ S
Sbjct: 423 INILREAKAVIPPQLEEMAAFS 444
>gi|346321958|gb|EGX91557.1| ATP-dependent RNA helicase DBP3 [Cordyceps militaris CM01]
Length = 628
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 136/294 (46%), Gaps = 22/294 (7%)
Query: 285 HTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSK 344
H V L+ GA+ D Q L S + +V+TP RL +S +D+SG + +V+D D +
Sbjct: 307 HCVCLYGGASKDDQ-RALLSRGADIIVATPGRLRDFMSDDTVDLSGSAFVVLDEADRMLD 365
Query: 345 GDTLSLIRQSISGKP-----HTVVFNDCLTYTSVPAVQN--------LLLGSINRLSLNQ 391
I+Q + P T++F + SV ++ N + +GS + + N
Sbjct: 366 KGFEEDIKQILGSCPPREKRQTLMFTATWPF-SVQSLANTFMVEPVKITIGSGGKETENG 424
Query: 392 SVASQSAC-IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
SV Q+ I QSV V +K + +Q++ + ++ + V + K++ +
Sbjct: 425 SVELQANTRITQSVEVMEG-HDKEFRLLQLVKQHHQGSKKNDRILVFCLYKKEAT--RIE 481
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPD 508
L KG ++ G + + + + + K+ ++ ++ L+ E ++VI
Sbjct: 482 QFLSRKGINVG-GIHGDLRQEQRTKSLEAFKQGVTPVLVATDVAARGLDIPEVKLVINVT 540
Query: 509 FIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
F +++++YV + R +G +FFT D AH+G ++ IL+ Q VPD L
Sbjct: 541 FPLTIEDYVHRIGRTGRAGKTGNAITFFTAQDKAHSGSLVNILKGANQPVPDEL 594
>gi|426199199|gb|EKV49124.1| hypothetical protein AGABI2DRAFT_65810 [Agaricus bisporus var.
bisporus H97]
Length = 494
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 140/322 (43%), Gaps = 19/322 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E +
Sbjct: 134 GPIALILAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIAI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCL 368
+TP RL+ ++ ++ ++ LV+D D + IR+ I T++F+
Sbjct: 190 ATPGRLIDMLESGKTNLKRITYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + + L + ++++ + + I Q V VC SD EK K I+ LD
Sbjct: 250 P-KDVQKLASDFLKDMIQVNIGSMDLTANHNIQQIVEVC-SDFEKRSKLIKHLDQ----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+E KVL VG ++ L+ G+ ++ V + + + +I
Sbjct: 303 ISAENAKVLIFVGTKRIADDITKYLRTDGWPALAIHGDKEQRERDWVLGEFKAGRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R + G +++FT ++A A ++
Sbjct: 363 ATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGLKGTSYTYFTTENAKAAREL 422
Query: 548 IEILEQCGQVVPDALRDLCHTS 569
I IL + V+P L ++ S
Sbjct: 423 INILREAKAVIPPQLEEMAAFS 444
>gi|115434786|ref|NP_001042151.1| Os01g0172200 [Oryza sativa Japonica Group]
gi|55296347|dbj|BAD68263.1| putative p68 RNA helicase [Oryza sativa Japonica Group]
gi|113531682|dbj|BAF04065.1| Os01g0172200 [Oryza sativa Japonica Group]
gi|215713416|dbj|BAG94553.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 759
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K ++ I +V L+ GA Q+ L + +V+TP
Sbjct: 303 GPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGA-DIVVATP 361
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL ++ ++ + + VS LV+D D + IR+ + K T++F
Sbjct: 362 GRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKE 421
Query: 372 SVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
+LL + N + +Q VA++S I Q V+V + EK + Q+L
Sbjct: 422 VRKIASDLLSNPVQVNIGNTDQLVANKS--ITQYVDVI-TPPEKSRRLDQILRS------ 472
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
EP + I + + ++ + Y S ++SV ++ R ++
Sbjct: 473 -QEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVA 531
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + ++++ VV+ DF +++YV + R +G+ ++FF D+ +A ++
Sbjct: 532 TDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLV 591
Query: 549 EILEQCGQVVPDALRDLC 566
+ILE Q V LRD+
Sbjct: 592 KILEGANQSVSQQLRDMV 609
>gi|307188310|gb|EFN73102.1| Probable ATP-dependent RNA helicase DDX43 [Camponotus floridanus]
Length = 677
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 27/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L + ++E A ++ GI V ++ G QI + + + +++TP
Sbjct: 331 GPNVLVMAPTRELALQIEKEVGKYSYRGIKAVCVYGGGNRKEQIN-IVTKGVQIVIATPG 389
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVP 374
RL LV ++VS V+ L++D D + IR+++ G +P +T + P
Sbjct: 390 RLNDLVQAGVLNVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPDRQT---VMTSATWP 446
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVN--VCASDEEKILKGIQVLDHAYGDHFHSE 432
L S + + V S + +V +C +E++ L + G +
Sbjct: 447 QGVRRLAQSYMKNPIQVCVGSLDLAAVHTVTQKICMINEDEKLDMMHQFFREMGSYD--- 503
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR------KRPAVS 486
KV+ GK +K ++ S L + +C H + +AD K AV
Sbjct: 504 --KVIVFFGKKAKVDDISSDLAL------SKIDCQSIH-GDREQADREQALEDLKTGAVQ 554
Query: 487 MIDKDHISTA--ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ +++ ++E+ V+ DF ++ YV + R +G +F T+ D HA
Sbjct: 555 ILLATDVASRGIDIEDITHVLNYDFPKDIEEYVHRVGRTGRAGRTGESITFMTRQDWHHA 614
Query: 545 GQMIEILEQCGQVVPDALRDLCH 567
++I ILE+ Q VP+ L +
Sbjct: 615 KELINILEEANQEVPEELYKMAE 637
>gi|302665308|ref|XP_003024266.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
gi|291188313|gb|EFE43655.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
Length = 1171
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 142/324 (43%), Gaps = 21/324 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ C+P LKA + V + GA I QI L+ E +V TP
Sbjct: 611 GPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 669
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + I +I TV+F+
Sbjct: 670 GRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATF 729
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V +D+ K ++ +++L + Y D
Sbjct: 730 PRNMEALARKTLSKPIEIIVGGRSVVAPE--ITQIVEV-RNDDAKFVRLLELLGNLYSDD 786
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAV 485
+E + L V + L+ L KGY SI G + I D K
Sbjct: 787 -ENEDARTLVFVDRQEAADRLLRDLMRKGYPCMSIHGGKD----QIDRDSTIDDFKAGIF 841
Query: 486 SMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ + ++V+ D +++YV R +G +F T+D +
Sbjct: 842 PILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERY 901
Query: 544 AGQMIEILEQCGQVVPDALRDLCH 567
+ + + L+Q GQ VP+ ++ + +
Sbjct: 902 SVDISKALKQSGQPVPEPIQKMVN 925
>gi|297846156|ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336801|gb|EFH67218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 539
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 27/319 (8%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V + G+ ++ ++ G++ QI +RS + ++ TP
Sbjct: 194 PTCLVLSPTRELAVQISDVLSEAGEPCGLKSICVYGGSSKRPQINAIRSGV-DIVIGTPG 252
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
RL L+ + +S VS +V+D D + +R +S N A
Sbjct: 253 RLRDLIESNELRLSDVSFVVLDEADRMLDMGFEEPVRFILSKT------NKVRQMVMFSA 306
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH------- 428
L +++L+ + +I SV++ A+ + +++ I+VLD D
Sbjct: 307 TWPL---DVHKLAQEFMDPNPIKVVIGSVDLAANHD--VMQIIEVLDERARDQRLVALLE 361
Query: 429 -FH-SEPLKVLYIVGKDSKFQNLVSTLKCKGY-SISTGSNCIVSHIKNSVEADGRKRPAV 485
+H S+ +VL + + L L+ +G+ ++S N S S+ K +
Sbjct: 362 KYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSL--FKEGSC 419
Query: 486 SMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ + EVVI F ++ ++YV + R G+ H+FFT+ +
Sbjct: 420 PLLVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQQNKGL 479
Query: 544 AGQMIEILEQCGQVVPDAL 562
AG+++ +L + GQVVPD L
Sbjct: 480 AGELVNVLREAGQVVPDDL 498
>gi|164659598|ref|XP_001730923.1| hypothetical protein MGL_1922 [Malassezia globosa CBS 7966]
gi|159104821|gb|EDP43709.1| hypothetical protein MGL_1922 [Malassezia globosa CBS 7966]
Length = 552
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 34/321 (10%)
Query: 259 LLFLVSSQEKAAKVRS----VCKPLKAFGIHTVSLHPGAAIDHQITGLRS--CEPEFLVS 312
+L + ++E A + R V +PL G L+ G + QI L S +V
Sbjct: 207 VLVIAPTRELAIQTRDNLARVAEPL---GYGVFCLYGGVSKGEQIRELASYALPVHIIVG 263
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL 368
TP R+L L +++D+ VS L +D D L KG D ++I + + + +
Sbjct: 264 TPGRVLDLAREESLDLGHVSYLTLDEADRMLDKGFEPDIRAIIGMTKTNEDGRR--TNMF 321
Query: 369 TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEK------ILKGIQ 419
+ T PAV+ L + R+++ V S + + Q+V V K L+ IQ
Sbjct: 322 SATWPPAVRGLADTFMRVPVRVTVGSDVLSANRRVSQTVQVLDDGRAKERALNTFLRTIQ 381
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIK-NSVEAD 478
+E + + + K++ Q + +TL+ GY +S + H + S+EA
Sbjct: 382 A-------QKTNEKILIFALYKKEA--QRVENTLRRWGYRVSGIHGDLSQHDRLASLEAF 432
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ + ++ E VI F +++++Y+ + R SG +FFT
Sbjct: 433 KTAETPLLVATDVAARGLDIPNVEYVINYTFPLTIEDYIHRIGRTGRGGKSGKAITFFTD 492
Query: 539 DDAAHAGQMIEILEQCGQVVP 559
+D AHAG++I +L+ Q VP
Sbjct: 493 EDKAHAGELIRVLKDANQPVP 513
>gi|332025289|gb|EGI65460.1| Putative ATP-dependent RNA helicase DDX17 [Acromyrmex echinatior]
Length = 706
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 161/367 (43%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 138 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINHQPRLSRG---DGPIVLILAPTREL 192
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A ++++V + FG I + G+ Q L E ++TP RL+ +
Sbjct: 193 AQQIQTVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKG 248
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 249 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLS 308
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
++++ + + I Q V +C + EK +K Q+L G S K++ V
Sbjct: 309 DYIQINIGSLTLAANHNIRQIVEIC-QEHEKEMKLSQLL-REIGTERGS---KMIIFVET 363
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
K ++ T+K +G+S + ++ V ++ R + ++ D + ++E+
Sbjct: 364 KKKVDDITKTIKREGWSAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVEDV 423
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+ VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ +
Sbjct: 424 KYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELIAVLEEAGQAINPQ 483
Query: 562 LRDLCHT 568
L D+ ++
Sbjct: 484 LADMANS 490
>gi|391339639|ref|XP_003744155.1| PREDICTED: ATP-dependent RNA helicase p62-like [Metaseiulus
occidentalis]
Length = 498
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 153/369 (41%), Gaps = 41/369 (11%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W KD++ +GS T+ ++V +A I R+ G GP L L ++E
Sbjct: 112 WPLALKGKDLIGVAQTGSGKTL---GYLVPSAL-HIVRQPNVGHP--GPTALVLAPTREL 165
Query: 269 AAKVRSVCKP--LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
++ SV L + I V ++ GA+ Q+ +R + V+TP RLL + + +
Sbjct: 166 VQQIASVSADWLLPSMRIRHVPVYGGASRLVQMNDMRRGF-DICVATPGRLLDFIQGREV 224
Query: 327 DVSGVSLLVVDRLDSLSKGDTLSLIRQSI-SGKP--HTVVFNDCLTYTSVPAVQNLLLGS 383
+S S LV+D D + IR I S +P T++F+ ++ +
Sbjct: 225 SLSNTSFLVLDEADRMLDMGFEPQIRDIIESMRPDRQTLMFSATWPQDVRSLARDFMSAD 284
Query: 384 INRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD 443
R+++ + + I Q + +++++K +L+ D K+L
Sbjct: 285 ATRINIGSTELCANDNITQELQFVSNEDQKTDLLFNILEQNSRD-------KILIFAATQ 337
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA------- 496
+ +L + I G C+ SH S+ KR + K H +
Sbjct: 338 RRVTHLAMKI------IRNGFRCVESHGGLSLA----KRERALQLFKGHCNIMVATDVAA 387
Query: 497 ---ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQ 553
+++ +VV+ DF ++++YV + R G +FF+ ++A+ A + +L +
Sbjct: 388 RGLDVQNIKVVVNYDFPQTIEDYVHRIGRTGRVEAKGRAFTFFSPENASFAKALAGVLTR 447
Query: 554 CGQVVPDAL 562
G +PD L
Sbjct: 448 SGHEIPDKL 456
>gi|328779178|ref|XP_623193.3| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Apis
mellifera]
Length = 588
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 134/315 (42%), Gaps = 10/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V +A G+ + GA Q L E ++TP
Sbjct: 186 GPIALILAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGV-EICIATP 244
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 245 GRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 304
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V A+ L L++ S + IIQ V+VC + EK LK ++L + +
Sbjct: 305 VRALAEDFLSDYMHLNIGSLTLSANHNIIQIVDVC-QEFEKDLKLYRLLQEIGNEKEN-- 361
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V K ++ ++ G+ + ++ V + + A ++ D
Sbjct: 362 --KTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDV 419
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++++ + VI D+ S ++Y+ + R +G ++FFT + HAG +IE+L
Sbjct: 420 AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL 479
Query: 552 EQCGQVVPDALRDLC 566
+ GQ + L ++
Sbjct: 480 REAGQNINPRLTEMA 494
>gi|451853181|gb|EMD66475.1| hypothetical protein COCSADRAFT_138086 [Cochliobolus sativus
ND90Pr]
Length = 617
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 21/297 (7%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ V ++ G D Q+ R +V+TP RL L+S + D+S +V+D D +
Sbjct: 303 GLSVVCVYGGVPKDPQVAACRKAH--IVVATPGRLNDLISDGSADLSKAEYVVLDEADRM 360
Query: 343 SKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNL---LLGSINRLSL--NQSVA 394
IRQ IS P T++F T T P+V++L + S R+++ NQS
Sbjct: 361 LDKGFEEAIRQIISQTPKKRQTLMF----TATWPPSVRDLASTFMSSPVRITIGDNQSGE 416
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS-KFQNLVSTL 453
++ I+ V K + +Q+L + + V + K++ + +N +
Sbjct: 417 LRANVRIKQVVEVVDPRAKEQRLLQLLKQYQSGKNKEDRILVFCLYKKEAVRIENFI--- 473
Query: 454 KCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFII 511
+ KG+ + G + +S K S K V ++ ++ L+ +VVI F +
Sbjct: 474 RMKGFRVG-GIHGDLSQEKRSASLAAFKEGHVPLLVATDVAARGLDIPAVKVVINVTFPL 532
Query: 512 SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+ ++YV + R G+ + FT+ D +G +I +L+ Q VP+ L T
Sbjct: 533 TAEDYVHRIGRTGRAGKEGLAITLFTEHDKGLSGSLINVLKAANQPVPEELMKFGTT 589
>gi|357626906|gb|EHJ76805.1| DEAD box ATP-dependent RNA helicase-like protein [Danaus plexippus]
Length = 773
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 160/387 (41%), Gaps = 22/387 (5%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
I +R G E+ + W I S +D+ + ++GS T+ A+I+ A
Sbjct: 197 IMTTIREQGWEEPTGIQAQGWPIAL-----SGRDMVGIASTGSGKTL---AYILPAAVHI 248
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGL 302
+ + + GP L L ++E A +++SV + A G I L G+ Q L
Sbjct: 249 VHQPRIQ--RGDGPIALILAPTRELAQQIQSVAQAYSARGFIRNTCLFGGSPKGPQARDL 306
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHT 361
E +++TP RL+ + ++ + LV+D D + IR+ I +P
Sbjct: 307 EKGV-EIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 365
Query: 362 VVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQV 420
V T+ + A+ L ++++ S + I Q + VC + EK K I +
Sbjct: 366 QVLMWSATWPKEIQALAEDFLTDYIKVNIGSLNLSANNNIKQIIEVC-EEHEKESKLINL 424
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
L + + KV+ V K ++ ++ G+ +++V + R
Sbjct: 425 LKEISSEKDN----KVIVFVETKKKVDDIAHAVRRNGHKALAIHGDKSQPERDAVLTEFR 480
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+I D + ++E+ + V+ D+ + ++Y+ + R SG +++FT
Sbjct: 481 NGSTTILIATDVAARGLDVEDVKFVVNYDYPNTSEDYIHRIGRTGRCQQSGTAYTYFTSG 540
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLC 566
DA A ++ +L + GQ P L D+
Sbjct: 541 DARQARALVAVLRETGQNPPSKLSDMA 567
>gi|353242513|emb|CCA74151.1| probable RNA helicase dbp2 (DEAD box protein) [Piriformospora
indica DSM 11827]
Length = 550
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 141/321 (43%), Gaps = 17/321 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ C A I +++ GA QI L+ E +++TP
Sbjct: 196 GPIVLILAPTRELAVQIQTECTKFGANSRIRNTAIYGGAPKGPQIRDLQRGV-EIVIATP 254
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ I T++F+
Sbjct: 255 GRLIDMLEQNKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWP-K 313
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGDHF 429
V + + L ++++ + + I Q+V V E+ K+LK ++++ + G
Sbjct: 314 DVQKLASDFLKDFIQVNIGSMELTANQNITQTVEVVTDFEKRNKLLKHLELISNENG--- 370
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
KVL V ++ L+ G+ ++ V A+ + + +I
Sbjct: 371 -----KVLIFVATKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLAEFKSGRSPILIA 425
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D S ++++ VI DF + ++Y+ + R +G ++FT +++ AG+++
Sbjct: 426 TDVASRGLDVKDVSYVINYDFPNNCEDYIHRIGRTGRAGKTGTAFTYFTAENSKAAGELV 485
Query: 549 EILEQCGQVVPDALRDLCHTS 569
IL Q VP L ++ S
Sbjct: 486 AILRDAKQHVPPQLEEMVRYS 506
>gi|242043730|ref|XP_002459736.1| hypothetical protein SORBIDRAFT_02g009590 [Sorghum bicolor]
gi|241923113|gb|EER96257.1| hypothetical protein SORBIDRAFT_02g009590 [Sorghum bicolor]
Length = 512
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 146/317 (46%), Gaps = 23/317 (7%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V A GI +V L+ G + QI+ L+S + ++ TP
Sbjct: 168 PRCLVLSPTRELAQQIADVLSEAGAPCGIKSVCLYGGTKKEPQISALKSGV-DIVIGTPG 226
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
R+ L+ + ++ VS +V+D D + +R +S T + +++
Sbjct: 227 RMKDLIEMGVCRLNEVSFVVLDEADRMLDMGFEPEVRAILS---QTSSVRQMVMFSATWP 283
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH--------AYGD 427
+ ++++L+ + +I S ++ A+ + +++ ++VLD A D
Sbjct: 284 L------AVHKLAQEFMDPNPIKVVIGSEDLAANHD--VMQIVEVLDDRTRDSRLLALLD 335
Query: 428 HFH-SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+H ++ +VL V + + + L+ +G+ + H + + ++
Sbjct: 336 KYHQAQSNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKAQHDRTKALSLFKEGKCPL 395
Query: 487 MIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG 545
MI D S ++ + EVVI + ++ ++YV + R G+ H+FFT+ + A AG
Sbjct: 396 MIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQANKALAG 455
Query: 546 QMIEILEQCGQVVPDAL 562
+++ +L + QVVP AL
Sbjct: 456 ELVNVLREADQVVPPAL 472
>gi|310790963|gb|EFQ26496.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 1112
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 147/327 (44%), Gaps = 33/327 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA G+ +V + GA I QI L+ E +V TP
Sbjct: 562 GPIGLIMTPTRELAVQIHRDCKPFLKAMGLRSVCAYGGAPIREQIAELKRGA-EIVVCTP 620
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ V+D D + G +++ + +P T++F+
Sbjct: 621 GRMIDLLAANQGRVTNLRRVTYAVLDEADRMFDMGFEPQVMKIFANIRPDRQTILFS--- 677
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + + + +V +S I Q V + D+ K + +L Y
Sbjct: 678 --ATMPRIIDSLTKKVLKSPVEITVGGRSVVASDITQIVEIVPEDQ-KFYHLLGLLGELY 734
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR---- 480
E + L V + K +L+ L KGY C+ H K+ V+ D
Sbjct: 735 D---KDEDARSLVFVERQEKADDLLKELMTKGYP------CMSIHGGKDQVDRDSTISDF 785
Query: 481 KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
K+ V ++ ++ L+ + ++V+ D ++YV R G ++ T+
Sbjct: 786 KKGIVPILIATSVAARGLDVKQLKLVVNYDCPSHSEDYVHRCGRTGRAGNKGTAVTYITE 845
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDL 565
+ + A + + LEQ GQ VP+ L ++
Sbjct: 846 EQESCASAVAKALEQSGQPVPERLEEM 872
>gi|224074379|ref|XP_002304361.1| predicted protein [Populus trichocarpa]
gi|222841793|gb|EEE79340.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 149/327 (45%), Gaps = 43/327 (13%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V + + G+ +V ++ G + QI L++ + ++ TP
Sbjct: 17 PLCLVLAPTRELADQISVVLRDAGEPCGVRSVCIYGGTSKGPQIKSLKAGV-DIVIGTPG 75
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L+ + + ++ VS +V+D D L G RQ + +++ N C +
Sbjct: 76 RLKDLIEMNVLHLAEVSFVVLDEADRMLDMG-----FRQEV----RSILSNTCSARQMIM 126
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPL 434
L ++ L+ + ++ S + A+ + +++ ++VL+ DH +
Sbjct: 127 FSATWPL-DVHNLAEEYMDPNPVKVVVGSEDTAANHD--VMQIVEVLE----DHLRDQ-- 177
Query: 435 KVLYIVGKDSKFQN---LVSTL------KCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
++L ++ K K Q LV L + G +G N + H + E ++ A+
Sbjct: 178 RLLALLEKYHKSQQNRVLVFALYQKEAERLDGMLRKSGWNVVSIHGNKAQE---QRTKAL 234
Query: 486 SMIDKDH----IST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
S+ K ++T ++ + EVVI F ++ ++YV + R G+ H+F
Sbjct: 235 SLFKKGSCPLMVATDVAARGLDVPDVEVVINYTFPLTAEDYVHRIGRTGRAGKKGVAHTF 294
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDAL 562
FT + AG+++ IL + GQ+VP AL
Sbjct: 295 FTHHNRGLAGELVNILREAGQIVPPAL 321
>gi|195125432|ref|XP_002007182.1| GI12524 [Drosophila mojavensis]
gi|193918791|gb|EDW17658.1| GI12524 [Drosophila mojavensis]
Length = 602
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 8/307 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++++V + + + GA Q + L++ E +++TP
Sbjct: 182 GPIALVVAPTRELAQQIQTVANDFGSSSYVRNTCIFGGAPRSKQASDLQNGV-EIVIATP 240
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RLL + ++ + LV+D D + IR+ +S +P + T+
Sbjct: 241 GRLLDFLQSGTTNLRRCTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQILMWSATWPKE 300
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + LG+ ++++ S + I Q V+VCA + EK K +L H Y
Sbjct: 301 VRQLAEDFLGNYIQINIGSLELSANHNIRQYVDVCA-EHEKGSKLKDLLSHIYDQS--GM 357
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
P K++ V K L + G + + +++V D R A ++ D
Sbjct: 358 PGKIIIFVATKKKVDELARFINAFGVGVGSIHGDKSQMDRDNVLNDFRSGRANILVATDV 417
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ +++ + VI DF S ++Y+ + R +G ++FFT+ +A A +IEIL
Sbjct: 418 AARGLDVDGIKYVINFDFPQSSEDYIHRIGRTGRKHSTGTSYAFFTRKNAKCARALIEIL 477
Query: 552 EQCGQVV 558
+ Q +
Sbjct: 478 REANQNI 484
>gi|356532479|ref|XP_003534800.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Glycine
max]
Length = 936
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 164/388 (42%), Gaps = 64/388 (16%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W +DI + +GS T+ +++ I +++ S GP +L L ++E
Sbjct: 286 WPVALQGRDIVAIAKTGSGKTL---GYLMPAF---ILLRQRRNNSLNGPTVLVLAPTREL 339
Query: 269 AAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +++ V K ++ + L+ GA Q+ L + +V+TP RL ++ +K ID
Sbjct: 340 ATQIQDEVIKFGRSSRVSCTCLYGGAPKALQLKELDRGA-DIVVATPGRLNDILEMKKID 398
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNLL---- 380
VSLLV+D D + IR+ ++ P T+++ +LL
Sbjct: 399 FGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPV 458
Query: 381 ---LGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHAYGDHFHSE 432
+G+++ L+ N++ I Q V V E E+IL+ +
Sbjct: 459 QVNIGNVDELAANKA-------ITQYVEVVPQMEKQRRLEQILRSQE------------- 498
Query: 433 PLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI---KNSVEAD---GRKRPAV 485
+ SK ST + C + S G + I K+ E D G+ R
Sbjct: 499 ---------RGSKVIIFCSTKRLCDQLARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGK 549
Query: 486 S--MIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
S ++ D + ++++ VVI DF +++YV + R +G+ ++FF++ D
Sbjct: 550 SPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWK 609
Query: 543 HAGQMIEILEQCGQVVPDALRDLCHTSP 570
HAG +I++LE Q V LR + P
Sbjct: 610 HAGDLIKVLEGANQHVLPELRQMALRGP 637
>gi|299747858|ref|XP_001837294.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
gi|298407711|gb|EAU84911.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
Length = 1081
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 31/328 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ V + G+ I QI L+ E +V TP
Sbjct: 494 GPMALVMTPTRELAVQIHKDCKPFLKVLGLRAVCAYGGSPIKDQIAELKKGA-EIIVCTP 552
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLS----KGDTLSLIRQSISGKPHTVVFNDC 367
R++ L+ S + ++ V+ +V+D D + + + +I +I TV+F+
Sbjct: 553 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKII-NNIRPDRQTVLFS-- 609
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQS---ACIIQSVNVCASDEEKILKGIQVLDHA 424
+ P + L I R L +V +S A I Q V V A D K + +++L
Sbjct: 610 ---ATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRAEDT-KFNRLLEILGQM 665
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRK 481
Y D + L V + NL+ L KGY S+ G + + ++S AD K
Sbjct: 666 YNDDPEC---RTLIFVDRQEAADNLLRDLMRKGYLCMSLHGGKDQV---DRDSTIADF-K 718
Query: 482 RPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
V ++ ++ L+ + ++VI D M++YV R G +F T +
Sbjct: 719 AGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPE 778
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCH 567
++ + L+ +P L DL +
Sbjct: 779 QERYSVDIYRALKASEATIPKELEDLAN 806
>gi|146421825|ref|XP_001486856.1| hypothetical protein PGUG_00233 [Meyerozyma guilliermondii ATCC
6260]
Length = 534
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 139/290 (47%), Gaps = 25/290 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G+ V+++ G D QI +++ +V+TP RL+ L++ A+D+S + LV+D D
Sbjct: 226 GLTCVAIYGGVPKDQQIKAVKTAS--VVVATPGRLVDLLNDGAVDLSTIDYLVLDEADRM 283
Query: 342 LSKG--DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINR---LSL-NQSVAS 395
L KG + + I + + T++F T T V+ L +N+ +S+ N+ +
Sbjct: 284 LEKGFEEDIKNIIGCTNKQRQTLMF----TATWPKEVRELAATFMNKAVKVSIGNRDELA 339
Query: 396 QSACIIQSVNVC-ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK 454
+ I Q+V V D+E+ L +Q+L D K+L + + + L+
Sbjct: 340 ANKRITQTVEVMDPRDKERRL--LQLLRQYGSDQ------KILVFALYKKEATRVEAMLR 391
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIIS 512
G++++ ++ + S D KR +++ ++ L+ +VVI F ++
Sbjct: 392 RSGFNVAAIHGDLLQQQRTSA-LDSFKRGDSNLLLATDVAARGLDIPNVKVVINLTFPLT 450
Query: 513 MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++YV + R +GI H+ FT+ + +G ++ +L GQ VPD L
Sbjct: 451 VEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLSGALMNVLRGAGQPVPDEL 500
>gi|332029665|gb|EGI69554.1| Putative ATP-dependent RNA helicase DDX17 [Acromyrmex echinatior]
Length = 595
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 157/368 (42%), Gaps = 25/368 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + ++GS T+ I A + + ++RK+ GP L L ++
Sbjct: 160 WPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLSRKD-------GPIALVLAPTR 212
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ V + GI L+ GA Q L E +++TP RLL +
Sbjct: 213 ELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGV-EIVIATPGRLLDFLESGK 271
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LL 381
++ + LV+D D + IR+ I +P T+ V+NL L
Sbjct: 272 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK--EVKNLAEDFL 329
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ S + I+Q ++VC D EK K +L + SE +++I
Sbjct: 330 KDYAQINVGSLQLSANHNILQIIDVC-QDYEKENKLSTLLKEIMAE---SENKTIVFIET 385
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
K + + +K G+ ++ V D R A ++ D + ++E+
Sbjct: 386 K-RRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVED 444
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+ VI D+ ++YV + R +G ++FFT ++A A +I++L++ QV+
Sbjct: 445 VKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNANKANDLIQVLKEANQVINP 504
Query: 561 ALRDLCHT 568
L +L +
Sbjct: 505 KLLELADS 512
>gi|380012841|ref|XP_003690483.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Apis
florea]
Length = 681
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 144/364 (39%), Gaps = 23/364 (6%)
Query: 211 WKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W S +D++ +T + + ++ I R E++G P +L + ++E
Sbjct: 300 WPILLSGRDLIGIAQTGTGKTLAFLLPALIHIEGQQIPRVERKG-----PNVLIMAPTRE 354
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ GI V L+ G Q+ + E +++TP RL LV K ++
Sbjct: 355 LALQIEKEVNKYSYHGIKAVCLYGGGNRKKQVNVVTEG-VEIVIATPGRLNDLVESKILN 413
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNLLLGSINR 386
+S ++ LV+D D + IR+++ +P +T + P L S +
Sbjct: 414 ISSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDR---QTVMTSATWPQGVRRLAQSYMK 470
Query: 387 LSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKD 443
+ V S + +V + DEE + D Y P KV+ GK
Sbjct: 471 HPIQVFVGSLDLATVHTVMQKIYIVDEE------EKTDMMYEFFRKMSPSDKVIIFFGKK 524
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYE 502
+K ++ S L + + + + D + ++ D S ++E+
Sbjct: 525 TKVDDVASDLALQSVNCQSIHGGREQSDREQALEDLKTGEVQILLATDVASRGIDIEDIT 584
Query: 503 VVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
V+ DF ++ YV + R SG +F T+ D HA +I ILE+ Q VP+ L
Sbjct: 585 HVLNYDFPRDIEEYVHRVGRTGRAGRSGESITFMTRKDWTHAKDLINILEEANQEVPEEL 644
Query: 563 RDLC 566
+
Sbjct: 645 YQMA 648
>gi|366993102|ref|XP_003676316.1| hypothetical protein NCAS_0D03740 [Naumovozyma castellii CBS 4309]
gi|342302182|emb|CCC69955.1| hypothetical protein NCAS_0D03740 [Naumovozyma castellii CBS 4309]
Length = 519
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 147/336 (43%), Gaps = 37/336 (11%)
Query: 252 FSFTGPFLLFLVSSQEKAAKVRS-VCKPLKAF---------------GIHTVSLHPGAAI 295
F+F P + +LV + K+ V+ V P + G+ ++ G
Sbjct: 162 FAFGVPAINYLVLNNGKSKGVQVLVISPTRELASQIYDNLIVLTDKVGLECCCVYGGVPK 221
Query: 296 DHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLI 351
D Q LR + +V+TP RLL L+ ++D+S V LV+D D L KG D ++I
Sbjct: 222 DAQRAQLRRSQ--VVVATPGRLLDLIQEGSVDLSAVKYLVLDEADRMLEKGFEEDIKNII 279
Query: 352 RQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINR---LSL-NQSVASQSACIIQSVNVC 407
R++ + T++F T T V+ L +N+ +S+ N+ S + I Q V V
Sbjct: 280 RETATKDRQTLMF----TATWPKEVRELASSFMNKPVKVSIGNRDELSANKRITQIVEVI 335
Query: 408 ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI 467
+ K K +++L +HS+ KVL + + TL+ GY ++ +
Sbjct: 336 EP-QRKDRKLLELLKK-----YHSKKEKVLIFALYKKEAARVERTLRYNGYDVAAIHGDL 389
Query: 468 VSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+ + + + ++ D + ++ + VI F +++++YV + R
Sbjct: 390 SQEQRTKALGEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRA 449
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+G H+ FT+ + AG ++ +L Q VP+ L
Sbjct: 450 GQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDL 485
>gi|322796814|gb|EFZ19232.1| hypothetical protein SINV_01003 [Solenopsis invicta]
Length = 1201
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 163/393 (41%), Gaps = 29/393 (7%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
+EN R +G + P+ W I S +D+ + +GS T+ +I+
Sbjct: 124 MENIHR-EGYLRPTPIQAQGWPIAL-----SGRDLVAIAQTGSGKTL---GYILPAIVHI 174
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQI 299
I + S GP +L L ++E A +++ V +FG + + GA Q
Sbjct: 175 IHQPRIS--SGDGPIVLILAPTRELAQQIQEVAN---SFGEMAAVRNTCIFGGAPKGPQA 229
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-K 358
L E ++TP RL+ + ++ + LV+D D + IR+ I +
Sbjct: 230 HDLEKG-IEICIATPGRLIDFLEKGTTNLYRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 288
Query: 359 PHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKG 417
P V T+ V A+ L L++ S + I Q ++VC + EK LK
Sbjct: 289 PDRQVLMWSATWPKEVRALAEDFLTDYIHLNIGSLTLSANHNITQIIDVC-QEYEKDLKL 347
Query: 418 IQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEA 477
++L + + K + V K ++ ++ +G+ + ++ V
Sbjct: 348 YRLLQEIGTEKEN----KTIIFVETKRKVDDITKNIRREGWQAVSIHGDKNQQERDHVLQ 403
Query: 478 DGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
+ R A ++ D + ++++ + VI DF S ++Y+ + R +G ++FF
Sbjct: 404 EFRNGKAPILVATDVAARGLDVDDVKYVINFDFPSSSEDYIHRIGRTGRKRQTGTAYAFF 463
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
T + HAG +IE+L + GQ V L ++ +
Sbjct: 464 TTHNMKHAGDLIEVLREAGQNVNPRLSEMAEMA 496
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 161/400 (40%), Gaps = 52/400 (13%)
Query: 188 NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADS 243
N +R G + + W I S +D+ + +GS T+ I A +
Sbjct: 718 NEIRRQGFGEPTAIQAQGWPIAL-----SGRDMVGIAQTGSGKTLAYILPAIVHINHQPR 772
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQI 299
++R + GP L L ++E A +++ V FG + + GA Q
Sbjct: 773 LSRND-------GPIALILAPTRELAQQIQQVAS---DFGMSSQVRNTCIFGGAPKGPQA 822
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-K 358
L E ++TP RL+ + ++ + LV+D D + IR+ + +
Sbjct: 823 RDLERGV-EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIR 881
Query: 359 PHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL 415
P T+ V+NL L ++++ + + I+Q V+VC + EK
Sbjct: 882 PDRQTLMWSATWPK--EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVC-EEYEKES 938
Query: 416 KGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNC 466
K +++L+ +EP K + V K ++ + G+ +
Sbjct: 939 KLMKLLEE-----ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDY 993
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+++ +NS R A+ + ++E+ + VI D+ + ++YV + R
Sbjct: 994 VLNQFRNS-------RSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRS 1046
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+G ++FFT +A AG +I++LE+ QVV L DL
Sbjct: 1047 QRTGTAYAFFTPGNAHKAGDLIQVLEEAKQVVNPKLYDLS 1086
>gi|302318882|ref|NP_001032894.2| ATP-dependent RNA helicase DDX42 [Danio rerio]
Length = 908
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 135/322 (41%), Gaps = 14/322 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E ++ + CK KA+G+ +V+++ G ++ Q L+ E +V TP
Sbjct: 328 GPIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGA-EIVVCTP 386
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ V KA + V+ LV D D + +R S +P T++F+
Sbjct: 387 GRLIDHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 446
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
+++L+ I + + A++ I Q V V S ++K + L +
Sbjct: 447 IEKLARDILVDPIRVVQGDIGEANED--ITQIVEVLQSGQDKWGWLTRRLVE------FT 498
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
VL V K + + L + L +GYS+ + +N V AD +K+ ++ D
Sbjct: 499 SAGSVLVFVTKKANCEELATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATD 558
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ ++ V+ D + + + R G+ ++ T D + AG ++
Sbjct: 559 VAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTTKDTSFAGDLVRN 618
Query: 551 LEQCGQVVPDALRDLCHTSPML 572
LE Q V L DL +P
Sbjct: 619 LEGANQSVSKDLLDLAMQNPWF 640
>gi|255078160|ref|XP_002502660.1| DEAD/DEAH box helicase [Micromonas sp. RCC299]
gi|226517925|gb|ACO63918.1| DEAD/DEAH box helicase [Micromonas sp. RCC299]
Length = 611
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 162/411 (39%), Gaps = 49/411 (11%)
Query: 189 AMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSST----IVQIAWIVATAAD 242
A+ G E P+ +W I KD++ +GS T + +A IV A
Sbjct: 170 ALLKQGYESPTPIQAQAWPIAV-----KGKDVIAIAKTGSGKTCGFLLPALAKIVKQGAT 224
Query: 243 SIARKEKEGFSFTG----PFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGAAIDH 297
+ E F P + L ++E A ++ C K A G V+L+ GA+
Sbjct: 225 AAPDMEMVDGRFRPAAVVPHAIVLAPTRELAIQIGDECAKFCPAAGAKVVTLYGGASKGD 284
Query: 298 QITGLRSCEPEFLVSTPERLLKLVSLKA-----IDVSGVSLLVVDRLDSLSKGDTLSLIR 352
Q+ LRS + LV+TP RL ++ + +V+D D + I+
Sbjct: 285 QLRALRSGA-DVLVATPGRLHDFLAPPPGFSAPVSARNAHYVVLDEADRMLDMGFEPQIK 343
Query: 353 QSISGKP---HTVVFNDCL---------TYTSVPAVQNLLLGSINRLSLNQSVASQSACI 400
+ I P T++F T+ A + +RL+ N+S I
Sbjct: 344 KIIKMCPTARQTLMFTATWPDGVRKIADTFLQPDAALVRIGDGGDRLTANKS-------I 396
Query: 401 IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI 460
Q++ + D+ K+ + I VL D + G + + +K G
Sbjct: 397 TQTIEIVTEDQ-KLDRAIAVLKENLVDGARG-----IVFCGTKRRCDFIDRKMKAMGLRS 450
Query: 461 STGSNCIVSHIKNSVEAD-GRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVE 518
+ + + D RK A ++ D + ++ VV+V DF + +++YV
Sbjct: 451 AGAIHGDKDQAEREYSLDLFRKGKAPLLVATDVAARGLDIPGVTVVLVYDFPLQVEDYVH 510
Query: 519 ILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+ R G H FFT++DA A ++++ILE Q VP+ LR++ S
Sbjct: 511 RIGRTGRAGKEGKAHCFFTEEDAGAARELVQILEGAEQEVPERLREMADRS 561
>gi|126632201|gb|AAI33101.1| Ddx46 protein [Danio rerio]
Length = 1032
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 172/413 (41%), Gaps = 37/413 (8%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ NA++ E+ P+ + S +D++
Sbjct: 346 GKGCPK---PIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAI-----PAIMSGRDLIGI 397
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D E EG P + + ++E A ++ CK K
Sbjct: 398 AKTGSGKTIAFLLPMFRHILDQRPVGEAEG-----PLAVIMTPTRELALQITKECKKFSK 452
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
+ + V ++ G I QI L+ E +V TP R++ ++ + ++ V+ +V+D
Sbjct: 453 SLALRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVID 511
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ T + +L + +SV
Sbjct: 512 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVV 571
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK 454
++ + +E+K LK +++L H + E V+ V K L+ L
Sbjct: 572 CSD---VEQHVIVIEEEKKFLKLLEILGH------YQEKGSVIIFVDKQEHADGLLKDLM 622
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS-- 512
Y + I + ++S+ D K A ++ ++ L+ ++++V ++
Sbjct: 623 KASYPCMSLHGGIDQYDRDSIIND-FKNGACRLLVATSVAARGLDVKQLILVVNYSCPNH 681
Query: 513 MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+ A ++G +++ LE G VP L L
Sbjct: 682 YEDYVHRAGRTGRARNKGYAYTFITEGQARYSGDILKALELSGSSVPAELEQL 734
>gi|340521284|gb|EGR51519.1| predicted protein [Trichoderma reesei QM6a]
Length = 1247
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 145/326 (44%), Gaps = 31/326 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK + V + GA I QI L+ E +V TP
Sbjct: 691 GPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIREQIAELKRGA-EIIVCTP 749
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 750 GRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 806
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYG 426
++P + + L + + + +V +S + + EE K L+ +++L Y
Sbjct: 807 --ATMPRLIDSLTKKVLKSPIEITVGGRSVVAKEITQIVEVREENTKFLRVLELLGELYD 864
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR----K 481
E + L V + K +L+ L KGY C+ H K+ V+ D K
Sbjct: 865 ---KDEDARTLIFVERQEKADDLLKELMQKGYP------CMSIHGGKDQVDRDSTISDFK 915
Query: 482 RPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ V ++ ++ L+ + ++VI D +++YV R +G +F T +
Sbjct: 916 KGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTPE 975
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ Q VP+ L ++
Sbjct: 976 QENCAPGIAKALEQSDQPVPERLNEM 1001
>gi|60115445|dbj|BAD90013.1| p68 RNA helicase [Tubifex tubifex]
Length = 490
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 168/409 (41%), Gaps = 32/409 (7%)
Query: 174 CPSKFLIL---CL-NAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSS 227
CP L CL + ++ +R Q P+ W I S DI + +GS
Sbjct: 56 CPKPILTFQEACLPDYVQLILRQQNWTQPTPIQAQGWPIAL-----SGLDIVGIAQTGSG 110
Query: 228 STIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG---- 283
T+ I A I + + + GP L LV ++E A +V V + FG
Sbjct: 111 KTLSYIL----PAIIHINHQPRLQYG-DGPVCLVLVPTRELAQQVAQVAQ---LFGNTSS 162
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLS 343
+ V ++ GA QI L+ E ++TP RL+ L+ ++ + LV+D D +
Sbjct: 163 VRNVCVYGGAPKGPQIRDLQRGA-EICIATPGRLIDLLDAGKTNLQRCTYLVLDEADRML 221
Query: 344 KGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACII 401
IR+ + +P T+ V + L ++++ + + + I+
Sbjct: 222 DMGFEPQIRKILEQVRPDRQTLMWSATWPKEVKQLAETFLTDYIQINIGSTQLTANHSIL 281
Query: 402 QSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461
Q V+VC S+EEK K ++L G+ + K + V + +L +K G+ +
Sbjct: 282 QIVDVC-SEEEKESKLNRLLQEIMGESNN----KTMVFVETKRRANDLAYKMKRAGWMAA 336
Query: 462 TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEIL 520
++SV D R ++ D + ++++ + V+ D+ ++YV +
Sbjct: 337 CIHGDKSQEERDSVLRDFRNGRIPILVATDVAARGLDVDDVKFVVNFDYPNCSEDYVHRI 396
Query: 521 TSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
R +G ++ FT +A A +IE+L + Q + L L T+
Sbjct: 397 GRTGRAGHTGTAYTLFTPKNAPKARDLIEVLTEANQQINPKLSQLMSTA 445
>gi|66819701|ref|XP_643509.1| hypothetical protein DDB_G0275443 [Dictyostelium discoideum AX4]
gi|74897315|sp|Q553B1.1|DDX46_DICDI RecName: Full=ATP-dependent RNA helicase ddx46; AltName:
Full=ATP-dependent RNA helicase helB1; AltName:
Full=DEAD box protein 46
gi|60471516|gb|EAL69472.1| hypothetical protein DDB_G0275443 [Dictyostelium discoideum AX4]
Length = 1151
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 143/332 (43%), Gaps = 40/332 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L + ++E A ++ CK K G+ T ++ GA+I QI L+ + +V TP
Sbjct: 582 GMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGA-DIVVCTP 640
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ + + ++ V+ LV+D R+ + G ++ I SI T++F
Sbjct: 641 GRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMF---- 696
Query: 369 TYTSVPAVQNLLLGSINR----LSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ T P V+N+ +N+ ++ +S+ S + I Q V V + E + + I++L
Sbjct: 697 SATFPPKVENVAKKILNKPLEIIAGGRSIVS--SDIEQFVEVRPT-ETRFRRLIELLSIW 753
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVE 476
Y ++L + NL L Y T + +S KN V+
Sbjct: 754 YHKG------QILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVK 807
Query: 477 ADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
P S ++++ +V+ D +++YV + R G ++F
Sbjct: 808 TILIATPLAS-------RGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFI 860
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
T D+ + +I+ LEQ G VPD LR L T
Sbjct: 861 TPDEERFSSSIIKALEQSGSKVPDELRKLNDT 892
>gi|351708460|gb|EHB11379.1| Putative ATP-dependent RNA helicase DDX46 [Heterocephalus glaber]
Length = 1255
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 173/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 635 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 686
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 687 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 741
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 742 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 800
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 801 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 855
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 856 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 907
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 908 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 966
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VVP L L
Sbjct: 967 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTVVPPDLEKL 1023
>gi|67459931|ref|NP_001019988.1| probable ATP-dependent RNA helicase DDX46 [Danio rerio]
gi|82277867|sp|Q4TVV3.1|DDX46_DANRE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|66473312|gb|AAY46301.1| DEAD box protein 46 [Danio rerio]
Length = 1018
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 172/413 (41%), Gaps = 37/413 (8%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ NA++ E+ P+ + S +D++
Sbjct: 332 GKGCPK---PIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAI-----PAIMSGRDLIGI 383
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D E EG P + + ++E A ++ CK K
Sbjct: 384 AKTGSGKTIAFLLPMFRHILDQRPVGEAEG-----PLAVIMTPTRELALQITKECKKFSK 438
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
+ + V ++ G I QI L+ E +V TP R++ ++ + ++ V+ +V+D
Sbjct: 439 SLALRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVID 497
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ T + +L + +SV
Sbjct: 498 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVV 557
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK 454
++ + +E+K LK +++L H + E V+ V K L+ L
Sbjct: 558 CSD---VEQHVIVIEEEKKFLKLLEILGH------YQEKGSVIIFVDKQEHADGLLKDLM 608
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS-- 512
Y + I + ++S+ D K A ++ ++ L+ ++++V ++
Sbjct: 609 KASYPCMSLHGGIDQYDRDSIIND-FKNGACRLLVATSVAARGLDVKQLILVVNYSCPNH 667
Query: 513 MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+ A ++G +++ LE G VP L L
Sbjct: 668 YEDYVHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAELEQL 720
>gi|340373969|ref|XP_003385512.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Amphimedon queenslandica]
Length = 648
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVST 313
GP +L L ++E A +V++V + K G+ T ++ GA Q+ + S C F+++T
Sbjct: 201 GPIVLVLAPTRELAIQVQNVVQEYSKVVGLRTCCVYGGAPKVPQLREISSGCH--FVIAT 258
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS 372
P RL+ + + + + LV+D D + IR+ +P V T+
Sbjct: 259 PGRLIDFMESGKVSLKRCTYLVLDEADRMLDMGFEPQIRKIFDQIRPDRQVLMWSATW-- 316
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSAC----IIQSVNVCASDEEKILKGIQVLDHAYGDH 428
P L G + + ++ S C I Q V +C + +K K +L+ G
Sbjct: 317 -PKEVQGLAGDFLKNYIQVNIGSLELCANHNITQVVEIC-EEFQKESKLNSLLESIMGQK 374
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+ K + V + + L+ G+ V + V + R A ++
Sbjct: 375 EN----KTIIFVETKRRVDEITRKLRYGGWPAICIHGDKVQTEREWVLNEFRSGKAPILL 430
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++ + + VI DF + ++YV + AR +G +SFFTK +A A +
Sbjct: 431 ATDVASRGLDVTDIKYVINFDFPGNTEDYVHRIGRTARAKNTGTAYSFFTKQNARQAKDL 490
Query: 548 IEILEQCGQVVPDALRDL 565
++IL + GQ + L D+
Sbjct: 491 LDILREAGQSINPKLYDM 508
>gi|393220991|gb|EJD06476.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 491
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 145/322 (45%), Gaps = 23/322 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALILAPTRELAVQIQQECT---KFGSNSKIRNTAIYGGAPKGPQIRDLQRGV-EIVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ + ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 190 ATPGRLIDMLETQKTNLLRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L + ++++ + + I Q + VC +D EK K ++ LD+
Sbjct: 250 P-KDVQKLANDFLTDMIQVNIGSMELTANHNITQIIEVC-TDFEKRNKLVKHLDY----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSV--EADGRKRPAVS 486
++ KVL ++ L+ G+ ++ V E G + P
Sbjct: 303 ISTQNAKVLIFTATKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKGGRSPI-- 360
Query: 487 MIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG 545
+I D S ++++ VI DF + ++Y+ + R GI ++FFT ++A A
Sbjct: 361 LIATDVASRGLDVKDVGFVINYDFPNNCEDYIHRIGRTGRAGQKGIAYTFFTTENAKSAR 420
Query: 546 QMIEILEQCGQVVPDALRDLCH 567
+++ IL++ VP L+++
Sbjct: 421 ELVTILKEAKAEVPPQLQEMVQ 442
>gi|225682788|gb|EEH21072.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides brasiliensis Pb03]
Length = 1203
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 166/387 (42%), Gaps = 35/387 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+NP + S I S +D++ +GS TI + + D + EG
Sbjct: 599 ENPTSIQSQAI---PAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLENMEG---- 651
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
P L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 652 -PIGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 709
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + + I ++ + TV+F+
Sbjct: 710 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNVRPQRQTVLFSATF 769
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 770 PRNMEALARKTLTKPVEIVVGGRSVVAPE--ITQIVEVRNEDT-KFVRLLALLGDLYADD 826
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
++E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 827 -NNEDARTLIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRDSTIADFKAG 879
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ I+T+ ++++ ++VI D +++YV R +G +F T+
Sbjct: 880 VFPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEVQE 939
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+A++ + ++
Sbjct: 940 RYSVDISKALKQSGQPVPEAVQKMVNS 966
>gi|395324055|gb|EJF56503.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 487
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 19/319 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALILAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 190 ATPGRLIDMLESGKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATW 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
V + N L ++++ + + I Q V V SD EK K I+ L+
Sbjct: 250 P-KDVQKLANDFLKDFIQVNIGSMELTANHNISQIVEVV-SDFEKRTKLIKHLEQ----- 302
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
E KVL VG ++ L+ G+ ++ V ++ + + +I
Sbjct: 303 ISQENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLSEFKAGRSPILI 362
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D S ++++ VI DF + ++Y+ + R ++G +++FT D+A A ++
Sbjct: 363 ATDVASRGLDVKDVRYVINYDFPNNCEDYIHRIGRTGRAGMTGTSYTYFTTDNAKQAREL 422
Query: 548 IEILEQCGQVVPDALRDLC 566
I IL + VP L ++
Sbjct: 423 IGILREAKAHVPPQLEEMS 441
>gi|350410178|ref|XP_003488972.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Bombus
impatiens]
Length = 704
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 33/321 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A ++ GI V ++ G Q+T + E +++TP
Sbjct: 364 GPTVLVLAPTRELALQIEKEVNKYSYHGIKAVCIYGGGCRKKQVTVVTEG-VEIVIATPG 422
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQS-ISGKPHTVVFNDCLTYTSVP 374
RL LV + ++VS VS LV+D D + IR++ I +P +T + P
Sbjct: 423 RLNDLVRTEVLNVSSVSYLVLDEADRMLDMGFEPQIRKALIDVRPDR---QTVMTSATWP 479
Query: 375 AVQNLLLGSINRLSLNQSVASQSAC----IIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
L S + + V S ++Q + + +++ + + D A D
Sbjct: 480 MSVRRLAKSYMKNPIQVYVGSLDLVAVHTVLQKIYIIDENDKTDMMHQFLRDMAPND--- 536
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP------- 483
KV+ K +K ++ S L NC S I E R++
Sbjct: 537 ----KVIIFFAKKAKVDDVASDLAL------MSVNC--SSIHGGREQADREQALEELKTG 584
Query: 484 -AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
A ++ D S ++E+ V+ DF ++ YV + R +G ++ T+ D
Sbjct: 585 EARILLATDVASRGIDIEDITHVLNFDFPRDIEEYVHRVGRTGRAGRTGESITYMTRSDW 644
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
+HA ++I ILE+ Q+VP+ L
Sbjct: 645 SHAKELINILEEANQIVPEEL 665
>gi|339232568|ref|XP_003381401.1| ATP-dependent RNA helicase DDX42 [Trichinella spiralis]
gi|316979810|gb|EFV62545.1| ATP-dependent RNA helicase DDX42 [Trichinella spiralis]
Length = 741
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 129/336 (38%), Gaps = 42/336 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L +V ++E A +V + K K F I V + G + Q L E +V TP
Sbjct: 276 GPICLIVVPTRELAIQVYNEAKKYGKYFDIRVVCAYGGGSKWEQSKALAEG-AEVVVCTP 334
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
R++ L+ KA + V+ V+D D + L Q S H CL +++
Sbjct: 335 GRIIDLIKAKATNFERVTYFVLDEADRMF---DLGFEAQVRSIADHIRPDRQCLMFSAT- 390
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQS-VNVCASDEEKILKGIQVLDHAYGDHFHSEP 433
I RL+ + V + +IQ V +D ++I+ ++F S P
Sbjct: 391 -----FKKKIERLA--RDVLTNPVKVIQGEVGEANADIQQIV-----------EYFASPP 432
Query: 434 LKVLYIVGKDSKF----------------QNLVSTLKCKGYSISTGSNCIVSHIKNSVEA 477
K +++G KF + + LK K + + + H +N V
Sbjct: 433 TKWTWLLGNLVKFCSMGKVLIFISQKVHVEEIAENLKAKDFRVCILHGDMFQHERNQVIH 492
Query: 478 DGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
+K +I D + ++ + VI D + +V + R G ++
Sbjct: 493 AFKKDDVPILIATDVAARGLDIPTIKTVINYDVAKDLDTHVHRIGRTGRAGEKGFAYTLV 552
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDALRDLCHTSPML 572
T D AG +++ LE Q VP AL +L S
Sbjct: 553 TDKDKEFAGHLVKSLESVNQEVPTALLNLAMQSAWF 588
>gi|401625757|gb|EJS43750.1| dbp3p [Saccharomyces arboricola H-6]
Length = 517
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 155/371 (41%), Gaps = 53/371 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF- 282
+ I +AW + + + G F+F P + L+ Q+K V P +
Sbjct: 130 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLLDDQKKRGIQVLVISPTRELA 189
Query: 283 --------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
G+ ++ G D Q LR + +V+TP RLL L+ ++D+
Sbjct: 190 SQIYDNLIILTNKVGMECCCVYGGVPKDEQRNQLRKSQ--VVVATPGRLLDLLQEGSVDL 247
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPA 375
S V+ LV+D D L KG D ++IR++ + K T++F T+ + P
Sbjct: 248 SQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI 307
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 308 --RVSIGNTDQLTANKKITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 352
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GYS++ + + + + ++ D
Sbjct: 353 NEKVLIFALYKKEAARVERNLKYNGYSVAAIHGDLSQQQRTQALNEFKSGKCNLLLATDV 412
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 413 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 472
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 473 NGANQPVPEDL 483
>gi|359477631|ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252874 [Vitis vinifera]
Length = 1165
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 169/401 (42%), Gaps = 69/401 (17%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G P+ +W I +DI + +GS T+ +++ A + R+ +
Sbjct: 517 GFSSPTPIQAQTWPIAL-----QGRDIVAIAKTGSGKTL---GYLIP--AFILLRRRRNN 566
Query: 252 FSFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFL 310
GP ++ L ++E A +++ K ++ + L+ G + + Q+ L + +
Sbjct: 567 VQ-NGPTVMVLAPTRELATQIQDETIKFGRSSRVSCACLYGGTSRNAQLKELDRGA-DVV 624
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDC 367
V+TP RL ++ K ID+ +SLLV+D D + IR+ ++ P T+++
Sbjct: 625 VATPGRLNDILESKKIDLGQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT 684
Query: 368 LTYTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKIL 415
+LL +GS++ L+ N+ I Q V V + E E+IL
Sbjct: 685 WPKEVRKIAGDLLVNPVQVNIGSVDELAANK-------AITQYVEVVSPPEKQRRLEQIL 737
Query: 416 KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSN---CIVSHI 471
+ + + SK ST K C + S G N ++
Sbjct: 738 RSQE----------------------RGSKVIIFCSTKKLCDQLARSIGRNFGAAVIHGD 775
Query: 472 KNSVEADG-----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMAR 525
K+ VE D R + ++ D + ++++ VVI DF +++YV + R
Sbjct: 776 KSQVERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGR 835
Query: 526 HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+G+ ++FF++ D +A +I++LE Q VP +RD+
Sbjct: 836 AGATGVSYTFFSEQDCKYAADLIKVLEGANQRVPPEVRDMA 876
>gi|358058046|dbj|GAA96291.1| hypothetical protein E5Q_02957 [Mixia osmundae IAM 14324]
Length = 558
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 160/388 (41%), Gaps = 41/388 (10%)
Query: 199 NPLFVNSWGIEFWKCYSSAKD---ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
P+ SWG+ F AKD I ET + + + + +K K
Sbjct: 155 TPIQSASWGVLF-----KAKDCVAIAETGSGKTMAFGLPGLHYIMSQESTKKAKS----- 204
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
+L + ++E A + + L + G+ V ++ G + D Q LR+ P +V TP
Sbjct: 205 -VAMLVVAPTRELAMQTHVTLEALGRPIGLGAVCIYGGVSKDEQKRLLRA-NPRIVVGTP 262
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG------DTLSLIRQSISGKPHTVVFNDC 367
RLL L + D+S VS LV+D D L KG + + + G+ T +F+
Sbjct: 263 GRLLDLAREECCDLSHVSCLVLDEADRMLDKGFENDIRTIIGMCKTKEQGR-RTSMFSAT 321
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVL------ 421
TSV + + R+++ + S + Q+V V A K + ++ L
Sbjct: 322 WP-TSVRRLAADFMSDPIRITVGSDELTASTSVEQTVKVLADSRMKDDELLRTLSKAGFK 380
Query: 422 ----DHAYGDHFHSEPLKVLYIVGKDS-KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
A G E V + K++ + +N +S GY + + +
Sbjct: 381 PGKASKAQGSGASREKCLVFALYKKEAVRVENYLSR---NGYEVCCIQGDLSQDKRTKAL 437
Query: 477 ADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
D + A M+ D + ++ + E+VI F +++++Y+ + R G +F
Sbjct: 438 DDFKTGKAGLMVATDVAARGLDIPKVELVINYTFPLTIEDYIHRIGRTGRAGRKGKSITF 497
Query: 536 FTKD-DAAHAGQMIEILEQCGQVVPDAL 562
F D D AHAG++ +L+ Q VP+AL
Sbjct: 498 FVGDHDKAHAGELTRVLKDAKQEVPEAL 525
>gi|378729404|gb|EHY55863.1| hypothetical protein HMPREF1120_03978 [Exophiala dermatitidis
NIH/UT8656]
Length = 1216
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 21/325 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 650 GPIGLVLSPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIADLKRGA-EIVVCTP 708
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + + I +I TV+F+
Sbjct: 709 GRMIDLLAANGGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNIRPDRQTVLFSATF 768
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L I + +SV + I Q V V + K ++ +++L Y D
Sbjct: 769 PRQMEALARKTLSKPIEIVVGGRSVVAPE--ITQIVEV-REESTKFVRLLELLGKLYEDD 825
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAV 485
+E +VL V + L+ L +GY SI G + I ++S AD K +
Sbjct: 826 -KNEDDRVLIFVDRQESADGLLRDLMKRGYPCMSIHGGKDQI---DRDSTIAD-FKAGVI 880
Query: 486 SMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ + ++V+ D +++YV R +G +F T++ +
Sbjct: 881 PILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQDRY 940
Query: 544 AGQMIEILEQCGQVVPDALRDLCHT 568
A + + L+Q GQ VP+ ++ L +
Sbjct: 941 AVDIAKALKQSGQPVPEPVQKLVDS 965
>gi|383847350|ref|XP_003699317.1| PREDICTED: ATP-dependent RNA helicase p62-like [Megachile
rotundata]
Length = 524
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 135/327 (41%), Gaps = 32/327 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGI-HTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L LV ++E A +++ V + + + GA Q L E ++TP
Sbjct: 175 GPIALILVPTRELAQQIQDVAHNFSSLSYAKSTCIFGGAPKGKQARDLEQGV-EICIATP 233
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSV 373
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 234 GRLIDFLEHGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPK- 292
Query: 374 PAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHAY 425
V+NL L +L++ S + I+Q ++VC E E +L+ I ++
Sbjct: 293 -EVRNLAEEYLVDYTQLNIGSLTLSANHNILQIIDVCEEHEKQTKLENLLQEISSVNPND 351
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG------ 479
G K + V K +N+ ++ G+ + CI K+ E D
Sbjct: 352 G--------KTIIFVETKKKVENIARNIRRYGWP----AVCIHGD-KSQGERDHVLTEFR 398
Query: 480 RKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
RKR A+ + ++++ + VI D+ S +NY+ + R SG ++FFT
Sbjct: 399 RKRNAILVATDVAARGLDVDDVKFVINFDYPTSSENYIHRIGRTGRSNNSGTSYAFFTPQ 458
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLC 566
+ A +I +L++ QV+ L +L
Sbjct: 459 NCRQAKDLINVLQEAKQVINPKLWELA 485
>gi|224002607|ref|XP_002290975.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972751|gb|EED91082.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 681
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 199 NPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTG 256
NP V + + C + +D++ +GS T+ + ++ D E TG
Sbjct: 82 NPFPVQA---QCLPCIMAGRDVIGIAKTGSGKTLAFVLPMLRHILDQPPLAPGE----TG 134
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ VCK K G+ + +++ GA + QI L+ L +TP
Sbjct: 135 PIGLILAPARELAYQIHVVCKGFTKHLGLKSTAVYGGAGVAEQIGDLKRGT-HILCATPG 193
Query: 316 RLLKLVSL---KAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCLT 369
RL+ ++++ K I + VS++ +D D + +S I ++ TV+F+
Sbjct: 194 RLIDILTMQSGKLISLQRVSMVCLDEADRAFDMGFESQISAILSAVRPDRQTVLFSATFP 253
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
+ L + + +SVAS S + Q V +E+K L+ +Q+L GDH
Sbjct: 254 KAVEQLAKKSLRAPLEIIVGGRSVASDS--VDQYAEVV-EEEDKFLRLLQIL----GDHA 306
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYS 459
+ KV+ VG+ + +L L GYS
Sbjct: 307 DDQK-KVIVFVGRQEQADSLFEQLTRCGYS 335
>gi|302791241|ref|XP_002977387.1| hypothetical protein SELMODRAFT_232961 [Selaginella moellendorffii]
gi|300154757|gb|EFJ21391.1| hypothetical protein SELMODRAFT_232961 [Selaginella moellendorffii]
Length = 413
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 170/394 (43%), Gaps = 51/394 (12%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G E+ +P+ +SW +D++ +GS T+ A+ V + K+KE
Sbjct: 6 GFEKPSPIQAHSWPFLL-----DGRDLIGIAATGSGKTL---AFGVPALVHILNHKKKEK 57
Query: 252 FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRS-CEPEF 309
G L L ++E A ++ +V + A G+ V L+ G++ Q + LRS C+
Sbjct: 58 KHSKGSRCLVLSPTRELAQQIAAVLEEAGASCGVKVVCLYGGSSKGPQYSSLRSGCD--I 115
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPH---TVVFND 366
+V+TP RL V + ++ LV+D D + +R +S P T++F+
Sbjct: 116 VVATPGRLQDFVDEGVCKLDQITYLVLDEADRMLDLGFEPAVRAIVSHIPQERQTIMFS- 174
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVL 421
T+ + S+ +L+ + + S +I + + E+ + + ++VL
Sbjct: 175 -ATWPT----------SVQKLA-QEFIQDASPELISFLQITVGSEDLSANHDVTQIVEVL 222
Query: 422 DHAYGDHFHSEPLKVLYIVGKDSKFQNLV----STLKCKGYSISTGSNCIVSHIKNSVEA 477
D D E L+ LY K ++ V ++ + + G N H S +A
Sbjct: 223 DDKSRDRRLQELLR-LYHKTKRNRVLVFVLYKKEAVRVENFLQKQGWNVTGIHGDKSQQA 281
Query: 478 DGRKRPAVSMIDKDH---IST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTV 528
R + + D H I+T ++ + E VI F ++ ++YV + R
Sbjct: 282 --RNQALSAFKDGSHPLLIATDVAARGLDIPDVEFVINYSFPLTTEDYVHRIGRTGRAGK 339
Query: 529 SGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
G H+FFT D A AG+++ IL + Q+VP+ L
Sbjct: 340 KGTAHTFFTTADKARAGELVNILREARQIVPEEL 373
>gi|293332577|ref|NP_001169296.1| uncharacterized protein LOC100383160 [Zea mays]
gi|224028479|gb|ACN33315.1| unknown [Zea mays]
gi|414884306|tpg|DAA60320.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 508
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 149/321 (46%), Gaps = 31/321 (9%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V A GI +V L+ G + QI+ L+S + ++ TP
Sbjct: 164 PRCLVLSPTRELAQQIADVLSEAGAPCGIKSVCLYGGTKKEPQISALKSGV-DIVIGTPG 222
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
R+ L+ + ++ VS +V+D D + + + +++ Q+ S + V+F+
Sbjct: 223 RMKDLIEMGVCCLNEVSFVVLDEADRMLDLGFEPEVRAILSQTSSVR-QMVMFSATWPL- 280
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-------- 423
++++L+ + +I S ++ A+ + +++ ++VLD
Sbjct: 281 -----------AVHKLAQEFMDPNPIKVVIGSEDLAANHD--VMQIVEVLDDRTRDSRLL 327
Query: 424 AYGDHFH-SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
A D +H ++ +VL V + + + L+ +G+ + H + + ++
Sbjct: 328 ALLDKYHQAQSNRVLVFVLYKKEAARVETMLQRRGWKAVSVHGDKAQHDRTKALSLFKEG 387
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
MI D S ++ + EVVI + ++ ++YV + R G+ H+FFT+ +
Sbjct: 388 KCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQANK 447
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
A AG+++ +L + QVVP AL
Sbjct: 448 ALAGELVNVLREADQVVPPAL 468
>gi|297797303|ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
gi|297312371|gb|EFH42795.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 139/321 (43%), Gaps = 22/321 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ + G+ + ++ GA QI LR E +++TP
Sbjct: 235 GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGV-EIVIATP 293
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ ++ + ++ V+ LV+D D + IR+ +S +P T+
Sbjct: 294 GRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPRE 353
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVLDHAYGD 427
V ++ L + + + + I Q + + + E+ +LK Q++D +
Sbjct: 354 VESLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK--QLMDGS--- 408
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
K+L V + L+ G+ ++ V A+ + + M
Sbjct: 409 -------KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQPERDRVLAEFKSGRSPIM 461
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
D + ++++ + V+ DF ++++Y+ + R G+ +FFT D+A A +
Sbjct: 462 TATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARE 521
Query: 547 MIEILEQCGQVVPDALRDLCH 567
+I+IL++ GQVVP L L
Sbjct: 522 LIKILQEAGQVVPPTLSALVR 542
>gi|255560866|ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 781
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 142/331 (42%), Gaps = 44/331 (13%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A +++ K ++ I L+ GA Q+ L R + +V+T
Sbjct: 235 GPTVLVLSPTRELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLKELDRGVD--IVVAT 292
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTY 370
P RL ++ ++ I +S VS LV+D D + IR+ + P T+++
Sbjct: 293 PGRLNDILEMRRISLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSRRQTLMYTATWPR 352
Query: 371 TSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDH 423
+LL+ + N ++++ VA++S I Q + V A E E+IL+
Sbjct: 353 EVRKIAADLLVNPVQVNIGNVDELVANKS--ITQYIEVLAPMEKHRRLEQILR------- 403
Query: 424 AYGDHFHSEPLKVLYIVGKDSKF-----QNLVSTLKCK---GYSISTGSNCIVSHIKNSV 475
EP + I K +NL T G + + ++S +
Sbjct: 404 ------SQEPGSKIIIFCSTKKMCDQLARNLTRTFGAAAIHGDKSQSERDHVLSQFRTG- 456
Query: 476 EADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ P + D ++++ VVI DF +++YV + R +G+ ++F
Sbjct: 457 -----RSPVLVATDV-AARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTF 510
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
F DA +A +I++LE Q VP +RD+
Sbjct: 511 FGDQDAKYASDLIKVLEGASQRVPPEIRDMA 541
>gi|212542881|ref|XP_002151595.1| DEAD/DEAH box RNA helicase [Talaromyces marneffei ATCC 18224]
gi|210066502|gb|EEA20595.1| DEAD/DEAH box RNA helicase [Talaromyces marneffei ATCC 18224]
Length = 1207
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 150/327 (45%), Gaps = 25/327 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 648 GPISLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 706
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 707 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMTNIRPNKQTVLFSATF 766
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L+ + + +SV + I Q V V ++ K L+ +++L + Y D
Sbjct: 767 PRNMEALARKTLIKPVEIIVGGRSVVAPE--ITQIVEV-RNENTKFLRLLELLGNLYSDE 823
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
+ E + L V + +L+ L KGY C+ H K+ ++ D +
Sbjct: 824 AN-EDARTLIFVDRQEAADSLLRELMRKGYP------CMSIHGGKDQIDRDSTIEDFKAG 876
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
I I+T+ ++++ ++V+ D +++YV R +G +F T+D
Sbjct: 877 IFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE 936
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+ ++ L +
Sbjct: 937 RYSVDIAKALKQSGQAVPEPVQKLVDS 963
>gi|323340126|ref|ZP_08080390.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
ruminis ATCC 25644]
gi|417972703|ref|ZP_12613593.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
gi|323092317|gb|EFZ34925.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
ruminis ATCC 25644]
gi|346330914|gb|EGX99143.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
Length = 419
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 209 EFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
E + + KD+L S + S T A ++ EK GP LL + SQE
Sbjct: 23 EVYPLLAQGKDVLGLSPTGSG--------KTLAYALPLLEKV-LKGDGPQLLIIAPSQEL 73
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
AA++ V +P K I T ++ GA + QI LR PE +V TP RLL L K +
Sbjct: 74 AAQLADVIRPWGKLLEIKTAAIIGGANVKRQIEKLRKDRPEVIVGTPGRLLNLADEKRLK 133
Query: 328 VSGVSLLVVDRLDS-LSKGDTLSLIRQSIS 356
+ + +V+D D L++ +TL+ R+ +S
Sbjct: 134 LHNLEAIVIDEADEMLAQEETLADCRKLVS 163
>gi|307215190|gb|EFN89962.1| Probable ATP-dependent RNA helicase DDX17 [Harpegnathos saltator]
Length = 540
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 157/366 (42%), Gaps = 25/366 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + ++GS T+ I A + + ++RK+ GP L L ++
Sbjct: 113 WPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLSRKD-------GPIALVLAPTR 165
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ V + GI L+ GA Q L S E +++TP RLL +
Sbjct: 166 ELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDSGV-EIVIATPGRLLDFLESGK 224
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LL 381
++ + LV+D D + IR+ I +P T+ V+NL L
Sbjct: 225 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK--EVKNLAEDFL 282
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ + + I+Q ++VC D EK K +L + SE +++I
Sbjct: 283 KDYAQINVGSLQLAANHNILQIIDVC-QDYEKENKLSTLLKEIMAE---SENKTIVFIET 338
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
K + + +K G+ ++ V D R A ++ D + ++E+
Sbjct: 339 K-RRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVED 397
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+ VI D+ ++YV + R +G ++FFT +++ A +I++L++ QV+
Sbjct: 398 VKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVINP 457
Query: 561 ALRDLC 566
L +L
Sbjct: 458 KLLELA 463
>gi|335998172|ref|ZP_08564084.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
gi|335348686|gb|EGM50187.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
Length = 419
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 209 EFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
E + + KD+L S + S T A ++ EK GP LL + SQE
Sbjct: 23 EVYPLLAQGKDVLGLSPTGSG--------KTLAYALPLLEKV-LKGDGPQLLIIAPSQEL 73
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
AA++ V +P K I T ++ GA + QI LR PE +V TP RLL L K +
Sbjct: 74 AAQLADVIRPWGKLLEIKTAAIIGGANVKRQIEKLRKDRPEVIVGTPGRLLNLADEKRLK 133
Query: 328 VSGVSLLVVDRLDS-LSKGDTLSLIRQSIS 356
+ + +V+D D L++ +TL+ R+ +S
Sbjct: 134 LHNLEAIVIDEADEMLAQEETLADCRKLVS 163
>gi|289740253|gb|ADD18874.1| ATP-dependent RNA helicase [Glossina morsitans morsitans]
Length = 692
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 150/373 (40%), Gaps = 39/373 (10%)
Query: 211 WKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W +D++ +T + + ++ SI R ++ GP +L L ++E
Sbjct: 307 WPILLKGEDMIGIAQTGTGKTLAFLLPALIHIEYQSIPRSQR-----GGPNVLILAPTRE 361
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTPERLLKLVSLKAI 326
A ++ GI V ++ G + QI + R E ++ TP RL LV I
Sbjct: 362 LALQIEKEVNKYSFRGIKAVCIYGGGNRNDQIQNVGRGVE--VIICTPGRLNDLVQANVI 419
Query: 327 DVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYTSVPAVQNLLLGS 383
DV+ V+ LV+D D + IR+ I T++ + T P V+ L
Sbjct: 420 DVTTVTYLVLDEADRMLDMGFEPQIRKVLLDIRPDRQTIM----TSATWPPGVRRLAQSY 475
Query: 384 IN---RLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVLDHAYGDHFHSEPLK 435
++ ++ + + + + Q V V D++ K +K +Q D K
Sbjct: 476 MSNPIQVCVGSLDLAATHSVRQVVEVVEEDDKFYMIKKFIKNMQPDD------------K 523
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHIST 495
++ GK + +L S L G+ + AD +I D S
Sbjct: 524 LIVFCGKKVRADDLSSDLTLDGFLCQAIHGSRDQADREQAIADITSGDVRILIATDVASR 583
Query: 496 A-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQC 554
++++ VI DF +++ YV + R +G S+ T+ D A A ++I+I+E+
Sbjct: 584 GLDIDDITHVINFDFPRNIEEYVHRVGRTGRAGRTGTSISYLTRSDWAMAPELIKIMEEA 643
Query: 555 GQVVPDALRDLCH 567
Q VPD L D+
Sbjct: 644 DQQVPDELIDMAE 656
>gi|5059030|gb|AAD38876.1|AF110008_1 p68 RNA helicase [Molgula occulta]
Length = 619
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 28/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP +L L ++E A +V+ V FG I ++ GA+ Q+ L R CE +
Sbjct: 222 GPIVLVLCPTRELAQQVQQVAA---EFGSSSHIKNTCVYGGASKGPQLRDLERGCE--IV 276
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ + K ++ + LV+D D + IR+ IS +P T
Sbjct: 277 IATPGRLIDFLEQKKTNLRRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSAT 336
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ V + + LG + + + S + I+Q V+VC EK K +++++ G+
Sbjct: 337 WPKEVSKLASDFLGDFVHVQVGSTGLSANHNILQIVDVCQP-MEKDEKLMRLMEEIMGE- 394
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRP 483
SE +++ K + L T++ G+ + CI K+ E D R
Sbjct: 395 --SENKTIIFTETK-RRCDELTRTMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGR 446
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
+ ++ D S ++ + + VI DF ++YV + AR G ++FFT D+A
Sbjct: 447 SPILVATDVASRGLDVHDVKFVINYDFPSQCEDYVHRIGRTARAEQKGTAYTFFTYDNAK 506
Query: 543 HAGQMIEILEQCGQVVPDALRDL 565
A ++ IL++ Q V L ++
Sbjct: 507 QAKDLVGILQEAKQAVNPKLLEM 529
>gi|149039843|gb|EDL93959.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 940
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|389750820|gb|EIM91893.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 443
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 135/317 (42%), Gaps = 32/317 (10%)
Query: 274 SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSL 333
+ C P IH+++++ G QI LRS + + +V TP R+L LVS + D+SGV
Sbjct: 114 TYCSP----PIHSIAIYGGVDKIPQIKALRSPDTKIVVGTPGRILDLVSDGSCDLSGVEY 169
Query: 334 LVVDRLDS-LSKGDTLSLIRQSISGKP----HTVVFNDCLTYTSVPAVQNLLLGSIN--- 385
LV+D D L KG + R KP T++F+ + P L +
Sbjct: 170 LVLDEADRMLDKGFENDIRRIVEHIKPIEERQTLMFS-----ATWPDAVRRLAATFQKDP 224
Query: 386 -RLSLNQSVASQSACIIQSVNVCASDEEK---ILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
R+++ + +A + Q V V D EK + K +Q L E +VL V
Sbjct: 225 VRVTIGSDDLTANARVAQVVEVFDDDREKDSRLFKHLQTLSPKKKHASDPESDRVLIFVL 284
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEY 501
+ + +TLK GYS+ G + +S K ++ ++ L+
Sbjct: 285 YKKEATRVEATLKRSGYSVE-GLHGDMSQGARLAALQAFKDGTTRLLVATDVAARGLDIP 343
Query: 502 EVVIVPD--FIISMKNYVEILTSMARHTVSGILHSFFTKD--DAAHAGQMIEILEQCG-- 555
V V + F +++++Y+ + R SG +FFT D + A AG++ +L G
Sbjct: 344 NVACVLNYSFPLTIEDYIHRIGRTGRGGKSGKSITFFTGDKHERALAGELARVLRDGGFD 403
Query: 556 ----QVVPDALRDLCHT 568
Q P +R H+
Sbjct: 404 SEPLQKFPMTIRKKTHS 420
>gi|328772390|gb|EGF82428.1| hypothetical protein BATDEDRAFT_29496 [Batrachochytrium
dendrobatidis JAM81]
Length = 508
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 148/329 (44%), Gaps = 29/329 (8%)
Query: 257 PFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A +++ + +A G+ +V ++ G Q L+ +V+TP
Sbjct: 160 PLTLVLSPTRELAMQIQDQFVQFGQAIGVKSVCIYGGMPKWEQKKLLQQGM-HVIVATPG 218
Query: 316 RLLKLVSL--KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP------HTVVFNDC 367
RL+ L + D+S V LV+D D + IR+ I P TV+F
Sbjct: 219 RLIDLFEEDDRTCDLSQVKYLVLDEADRMLDIGFEEAIRKIIKKLPTAAQGRQTVMF--- 275
Query: 368 LTYTSVPAVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLD 422
+ T ++Q + + +N ++++ + S + I Q V V + E ++L+ ++
Sbjct: 276 -SATWPQSIQRMAMSYLNNPVKVTVGSTDLSANISIEQRVEVLDPFAKETRLLQLLR--- 331
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
D+ S ++L + L LK GY++++ + +S ++ + DG +
Sbjct: 332 ----DYHKSRTNRILIFALYKKEASRLDQFLKRNGYNVAS-IHGDLSQVQRTAAIDGFRS 386
Query: 483 PAVSMIDKDHIST--AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
+ ++ ++ ++ E VI F +++++Y + R +GI H+ FT D
Sbjct: 387 GKIPLLIATDVAARGIDIPNVEYVINVTFPLTVEDYCHRIGRTGRAGKTGISHTMFTLHD 446
Query: 541 AAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+H+G +I IL+Q Q VP L T+
Sbjct: 447 KSHSGGLINILKQAKQPVPPELLKFGTTT 475
>gi|223590190|sp|A5DAC8.2|DBP3_PICGU RecName: Full=ATP-dependent RNA helicase DBP3
gi|190344457|gb|EDK36135.2| hypothetical protein PGUG_00233 [Meyerozyma guilliermondii ATCC
6260]
Length = 534
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 140/290 (48%), Gaps = 25/290 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G+ V+++ G D QI +++ +V+TP RL+ L++ A+D+S + LV+D D
Sbjct: 226 GLTCVAIYGGVPKDQQIKAVKTAS--VVVATPGRLVDLLNDGAVDLSTIDYLVLDEADRM 283
Query: 342 LSKG--DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINR---LSL-NQSVAS 395
L KG + + I + + T++F T T V+ L +N+ +S+ N+ +
Sbjct: 284 LEKGFEEDIKNIIGCTNKQRQTLMF----TATWPKEVRELAATFMNKAVKVSIGNRDELA 339
Query: 396 QSACIIQSVNVC-ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK 454
+ I Q+V V D+E+ L +Q+L D K+L + + + L+
Sbjct: 340 ANKRITQTVEVMDPRDKERRL--LQLLRQYGSDQ------KILVFALYKKEATRVEAMLR 391
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIIS 512
G++++ + +S + + D KR +++ ++ L+ +VVI F ++
Sbjct: 392 RSGFNVA-AIHGDLSQQQRTSALDSFKRGDSNLLLATDVAARGLDIPNVKVVINLTFPLT 450
Query: 513 MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++YV + R +GI H+ FT+ + +G ++ +L GQ VPD L
Sbjct: 451 VEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLSGALMNVLRGAGQPVPDEL 500
>gi|432871593|ref|XP_004071991.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Oryzias
latipes]
Length = 610
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 137/317 (43%), Gaps = 10/317 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V C K+ I + ++ GA QI L E ++TP
Sbjct: 166 GPICLVLAPTRELAQQVQQVACDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 224
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 225 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 284
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC ++ EK K IQ+++ + +
Sbjct: 285 VRQLAEDFLKEYVQINIGALELSANHNILQIVDVC-TESEKDQKLIQLMEEIMAEKEN-- 341
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V ++ R A +I D
Sbjct: 342 --KTIIFVETKKRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPVLIATDV 399
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR T G ++FFT + A +++ +L
Sbjct: 400 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARELVRVL 459
Query: 552 EQCGQVVPDALRDLCHT 568
E+ Q + L L T
Sbjct: 460 EEARQAINPKLLQLVET 476
>gi|19075356|ref|NP_587856.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe 972h-]
gi|48474674|sp|Q9P7C7.1|PRP11_SCHPO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp11
gi|7380876|emb|CAB85446.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe]
Length = 1014
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 157/364 (43%), Gaps = 26/364 (7%)
Query: 215 SSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKV 272
+S +D++ +GS TI + + D K EG P + + ++E A ++
Sbjct: 453 TSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEG-----PIAIIMTPTRELAVQI 507
Query: 273 RSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGV 331
CKP LK I + GA I QI L+ E +V TP R++ ++S A V+ +
Sbjct: 508 FRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGA-EIVVCTPGRMIDVLSANAGRVTNL 566
Query: 332 ---SLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSIN 385
+ LV+D D + G ++R +I TV+F+ + P L +
Sbjct: 567 HRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFS-----ATFPRAMEALARKVL 621
Query: 386 RLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD 443
+ + +V +S A ++ + +E K + +++L Y + ++ L V +
Sbjct: 622 KKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLD---VRTLVFVDRQ 678
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYE 502
L+S L +GY+ ++ H ++S +D + +I ++ +++ +
Sbjct: 679 ESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQ 738
Query: 503 VVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+V+ D M++YV + R +G+ +F T + +A + + L+ Q VP L
Sbjct: 739 LVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKEL 798
Query: 563 RDLC 566
+ L
Sbjct: 799 QTLA 802
>gi|452004595|gb|EMD97051.1| hypothetical protein COCHEDRAFT_118652 [Cochliobolus heterostrophus
C5]
Length = 429
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 21/296 (7%)
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLS 343
+ V ++ G D Q+ R +V+TP RL L+S + D+S +V+D D +
Sbjct: 116 LSVVCVYGGVPKDPQVAACRKAH--IVVATPGRLNDLISDGSADLSKAEYVVLDEADRML 173
Query: 344 KGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNL---LLGSINRLSL--NQSVAS 395
IRQ IS P T++F T T P+V++L + S R+++ NQS
Sbjct: 174 DKGFEEAIRQIISQTPKKRQTLMF----TATWPPSVRDLASTFMSSPVRITIGDNQSGEL 229
Query: 396 QSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS-KFQNLVSTLK 454
++ I+ V K + +Q+L + + V + K++ + +N + +
Sbjct: 230 RANVRIKQVVEVVDPRAKEQRLLQLLKQYQSGKNKEDRILVFCLYKKEAVRIENFI---R 286
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIIS 512
KG+ + G + +S K S K V ++ ++ L+ +VVI F ++
Sbjct: 287 MKGFRVG-GIHGDLSQEKRSASLAAFKEGHVPLLVATDVAARGLDIPAVKVVINVTFPLT 345
Query: 513 MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
++YV + R G+ + FT+ D A +G +I +L+ Q VP+ L T
Sbjct: 346 AEDYVHRIGRTGRAGKEGLAITLFTEHDKALSGSLINVLKAANQPVPEELMKFGTT 401
>gi|397629146|gb|EJK69221.1| hypothetical protein THAOC_09536 [Thalassiosira oceanica]
Length = 616
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 181/435 (41%), Gaps = 33/435 (7%)
Query: 158 KSCANGHHGQACEKLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSA 217
KS A+ D P + + I + +G E+ +P+ W ++ S
Sbjct: 162 KSLASNASFYPYRSFDSPGCVEKISVELINQCTKVNGFEKPSPIQAQCWPVQLSTDSSGR 221
Query: 218 -KDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRS 274
+D+ + +GS T+ ++ A + +K G S P +L L ++E A + +
Sbjct: 222 HQDVVGIAETGSGKTLAFSMPALSLMAKDKSLSKKRGRS---PRMLVLAPTRELAMQSQK 278
Query: 275 VCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSL 333
V + K + ++ ++ G Q LR + +V TP RL L++ A D+S V
Sbjct: 279 VLEEFGKVVSLTSMVVYGGVPKPAQKDLLRKG-VDCVVGTPGRLKDLINEGACDLSSVCH 337
Query: 334 LVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL------------- 379
LV+D D + +R IS K + T A+Q L
Sbjct: 338 LVLDEADRMLDMGFEEDVRYIISNCKSKETRQTAMFSATWPAAIQKLAMEFMVSPVCIYV 397
Query: 380 ----LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
++GS +++ S+++ + Q+V V D + + ++L ++ +
Sbjct: 398 GFESIVGSNGENAIDDSLSANKR-VTQTVEVI-EDRAREPRLRELLKKYTSGKRKNDRVL 455
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
V + K++ L TL G+S ++ G + IK E P + D
Sbjct: 456 VFALYKKEA--ARLEGTLNRWGFSCASIHGDKTQDARIKALAEFKDGSCPILVGTDV-AA 512
Query: 494 STAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQ 553
++ + EVV+ F +++++YV + R +GI ++FF D +HAG++ +++ Q
Sbjct: 513 RGLDIPDVEVVLNYTFPLTIEDYVHRIGRTGRAGKNGISYTFFQPGDKSHAGELQQVMRQ 572
Query: 554 CGQVVPDALRDLCHT 568
GQ +P++L T
Sbjct: 573 AGQEIPESLMKFGST 587
>gi|115491279|ref|XP_001210267.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
gi|121743211|sp|Q0D1K3.1|PRP5_ASPTN RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|114197127|gb|EAU38827.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
Length = 1181
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 149/333 (44%), Gaps = 37/333 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 622 GPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 680
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 681 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRPDRQTVLFSATF 740
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVA------SQSACIIQSVNVCASDEEKILKGIQVLD 422
+ ++ R +LN+ V S A I + ++++K ++ +++L
Sbjct: 741 PRN---------MEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLELLG 791
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRK 481
+ Y +E + L V + L+ L KGY C+ H K+ ++ D
Sbjct: 792 NLYSSD-ENEDARALIFVERQEAADTLLRELMRKGYP------CMSIHGGKDQIDRDSTI 844
Query: 482 RPAVSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ I I+T+ ++++ ++V+ D +++YV R +G +F
Sbjct: 845 EDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTF 904
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
T+D + + + L+Q GQ VP+ ++ + +
Sbjct: 905 LTEDQERFSVDIAKALKQSGQKVPEPVQQMVDS 937
>gi|348575055|ref|XP_003473305.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Cavia porcellus]
Length = 1031
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 173/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VVP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTVVPPDLEKL 752
>gi|331217131|ref|XP_003321244.1| hypothetical protein PGTG_02286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300234|gb|EFP76825.1| hypothetical protein PGTG_02286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 547
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 166/394 (42%), Gaps = 33/394 (8%)
Query: 184 NAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIV-QIAWIVATA 240
+ I + +R+ G +P+ +W + S +D++ S GS TI I ++
Sbjct: 122 DYIMSEIRNAGFNAPSPIQCQAWPMAL-----SGRDVVAVSATGSGKTIAFSIPAMIHIN 176
Query: 241 ADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQI 299
A + GP +L L ++E A +++ C A I ++ G QI
Sbjct: 177 AQPLLAPGD------GPIVLILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQI 230
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSIS 356
L E +++TP RL+ ++ + ++ V+ LV+D D L G + I + I
Sbjct: 231 RDLTRGA-EIVIATPGRLIDMLESRKTNLHRVTYLVMDEADRMLDMGFEPQIKKIVEQIR 289
Query: 357 GKPHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEK 413
T++F + T VQ L L ++++ + + I Q V VC SD EK
Sbjct: 290 PDRQTLMF----SATWPKEVQRLASEYLKDFIQVNVGSLDLTANINITQIVEVC-SDFEK 344
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN 473
K I+ L+ SE KVL VG +L L+ G+ ++
Sbjct: 345 RGKLIKHLEK-----ISSESAKVLIFVGTKRVADDLTKYLRQDGWPSLAIHGDKQQQERD 399
Query: 474 SVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGIL 532
V + + + MI D S ++++ VI D +++Y+ + R +G
Sbjct: 400 WVLEEFKSGRSPIMIATDVASRGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTA 459
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+S+ + D + A ++++IL Q+VP AL ++
Sbjct: 460 YSYISADQSKLAKELVKILRDAKQIVPSALVEMA 493
>gi|262369669|ref|ZP_06062997.1| superfamily II DNA and RNA helicase [Acinetobacter johnsonii SH046]
gi|381196601|ref|ZP_09903943.1| ATP-dependent RNA helicase RhlB [Acinetobacter lwoffii WJ10621]
gi|262315737|gb|EEY96776.1| superfamily II DNA and RNA helicase [Acinetobacter johnsonii SH046]
Length = 383
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 137/335 (40%), Gaps = 24/335 (7%)
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPG 292
A++V+ D + +E P L L ++E A ++ S K L F +H V+L G
Sbjct: 56 AFLVSVINDLLNNPIQEQRYRGEPRALILAPTRELALQIESDAKELTKFSDLHVVTLLGG 115
Query: 293 AAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR 352
D Q L + +V+TP RL+ V K + + + LV+D D L + ++
Sbjct: 116 VDFDKQKAQLDKKPVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVK 175
Query: 353 QSISGKP-----HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC 407
+ + P T++F+ +Y + Q L + + + + + + V
Sbjct: 176 RIVRFSPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVT-VEIEPEKKTNADVEQRVYMVA 234
Query: 408 ASDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNC 466
SD+ K+L+ I EP+ KV+ + + + L LK GY + S
Sbjct: 235 KSDKYKLLQDI----------LRDEPIEKVMIFANRRDQVRKLYDNLKRDGYKVVMLSGE 284
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMA 524
I + + + MI D ++ + V V +F + + +YV +
Sbjct: 285 IAQDKRLKMLDQFKNGQHNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTG 343
Query: 525 RHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
R G+ SF ++DDA + + EI + GQ +P
Sbjct: 344 RAGTRGVSISFLSEDDAFY---LPEIEKAIGQKLP 375
>gi|392987353|ref|YP_006485946.1| DEAD/DEAH box helicase [Enterococcus hirae ATCC 9790]
gi|392334773|gb|AFM69055.1| DEAD-box ATP dependent DNA helicase [Enterococcus hirae ATCC 9790]
Length = 423
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 249 KEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEP 307
KEG G LL LVSSQE A +V V + K + SL GA + QI GL+ P
Sbjct: 65 KEG----GSTLLILVSSQELAIQVAEVAREWSKGLALKVQSLVGGANVKRQIEGLKK-RP 119
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFN 365
E LV TP R+L+L+ K + + +V D D L SL+ Q + P + +VF
Sbjct: 120 EVLVGTPGRVLELMKTKKLKAHQLQTIVFDEADQLFDEGNRSLVEQILRQAPVDYQLVFF 179
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
S+ ++ + SI + + + S+ + + +E+ L+ + AY
Sbjct: 180 SATADRSISKIEEITNASIPVVDVTKDDDSRKGQQHYYLRIPPRKKEEYLRRL-----AY 234
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIST 462
FH L + ++ + L+ +G S+ +
Sbjct: 235 VTDFHG-----LVFFNQLNELGTMEEKLQFRGVSVGS 266
>gi|302812625|ref|XP_002987999.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
gi|300144105|gb|EFJ10791.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
Length = 505
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 138/328 (42%), Gaps = 32/328 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP +L L ++E A +++ FG I + ++ GA QI L+ E ++
Sbjct: 158 GPIVLVLAPTRELAVQIQQESA---KFGSSSKIKSTCIYGGAPKGPQIRDLQRGV-EIVI 213
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ ++ + ++ V+ LV+D D + IR+ + +P T+
Sbjct: 214 ATPGRLIDMLEGRHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLYWSATW 273
Query: 371 T-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
V + N L ++++ S + I Q V V +D EK K I++LD
Sbjct: 274 PKDVEQLANQFLHDPYKVTIGSSSLKANHSIAQHVEVV-NDYEKYQKLIKLLDE------ 326
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEADGRK 481
+ K+L + + L+ +G+ + ++S K K
Sbjct: 327 FMDGGKILIFMETKRGCDQVTKQLRMEGWPALSIHGDKSQAERDWVLSEFKTG------K 380
Query: 482 RPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
P ++ D ++++ VI DF S ++YV + R G ++FFT +A
Sbjct: 381 SPIMTATDV-AARGLDVKDIRYVINYDFPGSCEDYVHRIGRTGRAGAKGTAYTFFTVSNA 439
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHTS 569
HA +++ IL + GQ + L+ + + S
Sbjct: 440 KHARELVSILSEAGQRITPELQSMVNCS 467
>gi|550329|emb|CAA57417.1| putative RNA helicase [Dictyostelium discoideum]
Length = 582
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 145/330 (43%), Gaps = 36/330 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L + ++E A ++ CK K G+ T ++ GA+I QI L+ + +V TP
Sbjct: 95 GMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGA-DIVVCTP 153
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ + + ++ V+ LV+D R+ + G ++ I SI T++F
Sbjct: 154 GRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMF---- 209
Query: 369 TYTSVPAVQNLLLGSINR----LSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ T P V+N+ +N+ ++ +S+ S I Q V V + E + + I++L
Sbjct: 210 SATFPPKVENVAKKILNKPLEIIAGGRSIVSSD--IEQFVEVRPT-ETRFRRLIELLSIW 266
Query: 425 Y--GDHF----HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD 478
Y G E LY +S++Q L G T + +S KN V+
Sbjct: 267 YHKGQILIFTNRQETTDNLYRQLSNSQYQ----CLSLHGSKDQTDRDETISDFKNKVKTI 322
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
P S ++++ +V+ D +++YV + R G ++F T
Sbjct: 323 LIATPLAS-------RGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITP 375
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
D+ + +I+ LEQ G VPD LR L T
Sbjct: 376 DEERFSSSIIKALEQSGSKVPDELRKLNDT 405
>gi|388852991|emb|CCF53439.1| probable DBP3-putative RNA helicase required for pre-rRNA
processing [Ustilago hordei]
Length = 574
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 28/305 (9%)
Query: 280 KAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDR 338
K+ GI + L+ G + Q+ L ++ +V TP R+L + ++D+S V+ LV+D
Sbjct: 253 KSMGIGMICLYGGVSKQEQVRLLNQTPTVRIVVGTPGRVLDMARDGSLDLSDVTYLVLDE 312
Query: 339 LDS-LSKG---DTLSLIRQSIS---GKPHTVVFNDCLTYTSVPAVQNLLLGSIN---RLS 388
D L KG D ++I S G+ HT +F + T PAV+ L +N R++
Sbjct: 313 ADRMLDKGFEPDIRAIIGMCTSREDGR-HTSMF----SATWPPAVRGLAESFMNGPVRVT 367
Query: 389 LNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQN 448
+ S + + Q+V V A + K ++ D + S K+L + Q
Sbjct: 368 VGSDELSANRRVEQTVEVLA---DGYAKERRLNDFLRSVNAQSSKDKILIFALYKKEAQR 424
Query: 449 LVSTLKCKGYSIS-----TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV 503
+ TL+ G+S+S G N ++ ++ A+ P + D ++ E
Sbjct: 425 VEQTLRRGGFSVSGIHGDLGQNERIASLERFKSAE---TPLLVATDV-AARGLDIPNVEH 480
Query: 504 VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
VI F +++++YV + R +G +FFT+ D AHAG++I +L+ Q VP+ L
Sbjct: 481 VINYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTEMDKAHAGELIRVLKDADQKVPEDLT 540
Query: 564 DLCHT 568
T
Sbjct: 541 KFPTT 545
>gi|348575057|ref|XP_003473306.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Cavia porcellus]
Length = 1032
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 173/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VVP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTVVPPDLEKL 752
>gi|312376779|gb|EFR23772.1| hypothetical protein AND_12284 [Anopheles darlingi]
Length = 1243
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 160/377 (42%), Gaps = 30/377 (7%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFT 255
P F+ + G W S +D+ + +GS T+ I A + + +AR +
Sbjct: 103 PTFIQAVG---WSIAMSGRDMVGIAKTGSGKTLAYILPALVHISNQPRLARGD------- 152
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V + G+H + GAA Q LR E +++TP
Sbjct: 153 GPIALVLAPTRELAQQIKQVSDDFGRRMGVHNTCVFGGAAKYPQENDLRRGV-EIVIATP 211
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ IS +P V T+
Sbjct: 212 GRLIDFLERETTNLRRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKE 271
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
+ + L ++++ + + I+Q + C + EK + +L+ S+
Sbjct: 272 IRKLAEEFLRDYIQINIGSLNLAANENILQVIE-CCEEYEKENRLFMLLEK-----ISSQ 325
Query: 433 P-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
P K + V K +V+ ++ +G+ ++ V + R+ P ++ D
Sbjct: 326 PDNKAIIFVETKRKVDKIVNIIRRQGWRADGIHGDKSQKDRDYVLNNFRRSPNGLLVATD 385
Query: 492 HISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ST + + VI DF + ++YV + R T G ++FFT +A+ A +I +L
Sbjct: 386 -MST----DVKFVINFDFPNNTEDYVHRIGRTGRSTNKGTSYTFFTPANASKASDLIAVL 440
Query: 552 EQCGQVVPDALRDLCHT 568
+ Q + L + +
Sbjct: 441 QDANQYINPELHEYARS 457
>gi|119582642|gb|EAW62238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
gi|119582646|gb|EAW62242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|299470793|emb|CBN79839.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 572
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 171/420 (40%), Gaps = 46/420 (10%)
Query: 170 EKLDCP---SKFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET-- 223
+ DCP S F I A++ G P SW I S +DI+
Sbjct: 137 DSFDCPVPMSSFESTPFGGPIRGALKAAGYPAPTPTQAQSWPIAL-----SGRDIISVAR 191
Query: 224 SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKV-RSVCKPLKAF 282
+GS T+ +++ + R GP+++ L ++E A ++ K KA
Sbjct: 192 TGSGKTL---GFLLPAFHALLNRPGGCKPRMGGPYIVVLAPTRELACQINEEATKFGKAA 248
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GI + +++ G+ QI ++S + +++TP RL ++ + I+++ V L +D D +
Sbjct: 249 GIRSTTVYGGSPKYPQIKAIQSGV-QVVIATPGRLNDIMEMGKINMTNVMTLALDEADRM 307
Query: 343 SKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNL-----------LLGSINRLS 388
IR I P T+ F T T VQ L +G +L+
Sbjct: 308 LDMGFEPQIRTIIDAMPAKRQTLFF----TATWPKEVQRLARDFVTNPVHITVGDAGKLN 363
Query: 389 LNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQN 448
N+S I Q +++ + +K K ++L + + ++ K + K
Sbjct: 364 ANKS-------ITQHIHIV-DERDKGDKLWELLTKLHENPPKADHGKTIIFSSKKRNCDK 415
Query: 449 LVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV--VIV 506
L +G+++ + + V D + V M+ ++ L+ ++ VI
Sbjct: 416 LAQAAWDRGFAVDSLHGDREQWERTKV-MDQYRSGEVRMLVATDVAARGLDVKDISYVIN 474
Query: 507 PDFII-SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
DF + ++NY+ + AR SG +FFT DA A +++ +L Q VP L+ +
Sbjct: 475 YDFPVDGVENYIHRIGRTARGNASGDAFTFFTSSDAKFANKLVGVLRGANQDVPAELQKM 534
>gi|15222526|ref|NP_174479.1| DEAD-box ATP-dependent RNA helicase 5 [Arabidopsis thaliana]
gi|75333350|sp|Q9C551.1|RH5_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 5
gi|12321302|gb|AAG50723.1|AC079041_16 p68 RNA helicase, putative [Arabidopsis thaliana]
gi|12321459|gb|AAG50784.1|AC074309_1 RNA helicase, putative [Arabidopsis thaliana]
gi|19347812|gb|AAL86356.1| putative p68 RNA helicase [Arabidopsis thaliana]
gi|21436171|gb|AAM51373.1| putative p68 RNA helicase [Arabidopsis thaliana]
gi|332193302|gb|AEE31423.1| DEAD-box ATP-dependent RNA helicase 5 [Arabidopsis thaliana]
Length = 537
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 27/319 (8%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V + + G+ ++ ++ G++ QI+ +RS + ++ TP
Sbjct: 192 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGV-DIVIGTPG 250
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
RL L+ + +S VS +V+D D + +R +S N A
Sbjct: 251 RLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNT------NKVRQMVMFSA 304
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH------- 428
L +++L+ + II SV++ A+ + +++ I+VLD D
Sbjct: 305 TWPL---DVHKLAQEFMDPNPIKVIIGSVDLAANHD--VMQIIEVLDERARDQRLIALLE 359
Query: 429 -FH-SEPLKVLYIVGKDSKFQNLVSTLKCKGY-SISTGSNCIVSHIKNSVEADGRKRPAV 485
+H S+ +VL + + L L+ +G+ ++S N S S+ K +
Sbjct: 360 KYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSL--FKEGSC 417
Query: 486 SMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ + EVVI F ++ ++YV + R G+ H+FFT +
Sbjct: 418 PLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGL 477
Query: 544 AGQMIEILEQCGQVVPDAL 562
AG+++ +L + GQVVP L
Sbjct: 478 AGELVNVLREAGQVVPADL 496
>gi|385301732|gb|EIF45901.1| rna helicase [Dekkera bruxellensis AWRI1499]
Length = 537
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 153/367 (41%), Gaps = 25/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQ-IAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W S +D+ + ++GS T+ + IV A + ++ GP +L L ++E
Sbjct: 139 WPMALSGRDMVGIASTGSGKTLAYTLPAIVHINAQPLLQQGD------GPIVLILAPTRE 192
Query: 268 KAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL 323
A +++ C FG I ++ G QI L S E ++TP RLL ++
Sbjct: 193 LAVQIQQECG---KFGHTSRIRNTCVYGGVPRGPQIRAL-SRGVEICIATPGRLLDMLEG 248
Query: 324 KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLL 381
+ ++ V+ LV+D D + IR+ + +P T+ SV ++ L
Sbjct: 249 RKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKSVQSLARDYL 308
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ S S I Q VC SD EK K L D E KV+
Sbjct: 309 KDYIQVNIGSLELSASHTIKQIXEVC-SDFEKREKCCNYLKQEMAD----EKSKVIVFAS 363
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
L + L+ +G+ + ++ V + R + M+ D + ++++
Sbjct: 364 TKRTCDELTTYLREEGWPALSIHGDKEQRERDWVLNEFRTGKSPIMVATDVAARGIDVKD 423
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
VI D ++++YV + R G +FFT+D++ A +I +L + Q VP+
Sbjct: 424 VTAVINYDMPGNVEDYVHRIGRTGRAGAKGTAVTFFTRDNSHQAHDLIVVLREAKQEVPE 483
Query: 561 ALRDLCH 567
L+ + H
Sbjct: 484 ELQAMDH 490
>gi|42573778|ref|NP_974985.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
gi|108861888|sp|Q8W4R3.2|RH30_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 30
gi|110741550|dbj|BAE98724.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010323|gb|AED97706.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
Length = 591
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 146/329 (44%), Gaps = 38/329 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ + G+ + ++ GA QI LR E +++TP
Sbjct: 238 GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGV-EIVIATP 296
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFN------ 365
RL+ ++ + ++ V+ LV+D D + IR+ +S +P T++++
Sbjct: 297 GRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPRE 356
Query: 366 -DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQ 419
+ L + ++GS + L NQS+ Q + + + E+ +LK Q
Sbjct: 357 VETLARQFLRDPYKAIIGSTD-LKANQSIN-------QVIEIVPTPEKYNRLLTLLK--Q 406
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG 479
++D + K+L V + L+ G+ ++ V A+
Sbjct: 407 LMDGS----------KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEF 456
Query: 480 RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ + M D + ++++ + V+ DF ++++Y+ + R G+ +FFT
Sbjct: 457 KSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTH 516
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLCH 567
D+A A ++++IL++ GQVVP L L
Sbjct: 517 DNAKFARELVKILQEAGQVVPPTLSALVR 545
>gi|50305865|ref|XP_452893.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660558|sp|Q6CT46.1|DBP3_KLULA RecName: Full=ATP-dependent RNA helicase DBP3
gi|49642026|emb|CAH01744.1| KLLA0C15499p [Kluyveromyces lactis]
Length = 504
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 157/379 (41%), Gaps = 55/379 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRS-VCKPLK-- 280
+ I ++W A + + G F+F P + +V+S +K++ V+ V P +
Sbjct: 116 TPIQAVSWPYLLAGKDVIGIAETGSGKTFAFGVPAINNIVTSGDKSSSVKVLVISPTREL 175
Query: 281 -------------AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A G+ + ++ G D Q LR + +V+TP RLL L+ ++D
Sbjct: 176 ASQIYDNLIVLTDACGLRSCCVYGGVPKDQQREDLRRSQ--VVVATPGRLLDLIEEGSVD 233
Query: 328 VSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVP 374
+S V+ LV+D D L KG D +IRQ+ S T++F ++ S P
Sbjct: 234 LSHVNYLVLDEADRMLEKGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMSEP 293
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPL 434
+ +G+ + LS N+ I Q V V D + K + L Y HS P
Sbjct: 294 V--KVSIGNRDELSANKR-------ITQIVEVV--DPFRKEKKLLELLKKY----HSGPT 338
Query: 435 K---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K VL + + LK GY ++ + + + + ++ D
Sbjct: 339 KNDKVLIFALYKKEASRVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATD 398
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ ++ + VI F +++++YV + R G H+ FT+ + AG ++ +
Sbjct: 399 VAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLAGALVNV 458
Query: 551 LEQCGQVVPDALRDL-CHT 568
L GQ VP+ L+ HT
Sbjct: 459 LNGAGQPVPEELKKFGTHT 477
>gi|356511678|ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine
max]
Length = 774
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 166/402 (41%), Gaps = 37/402 (9%)
Query: 178 FLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAW 235
F L ++NA G P+ SW I +DI + +GS T+ +
Sbjct: 175 FPSELLREVQNA----GFSAPTPIQAQSWPIAL-----QGRDIVAIAKTGSGKTL---GY 222
Query: 236 IVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAA 294
+V I K S GP L L ++E A +++ K K+ I L+ GA
Sbjct: 223 LVPAF---IHLKRSGNNSKMGPTALVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAP 279
Query: 295 IDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQS 354
Q+ + + +V+TP RL ++ ++ I ++ VS LV+D D + IR+
Sbjct: 280 KGPQLRDIDRGA-DIVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKI 338
Query: 355 ISGKPH---TVVFNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCAS 409
++ P+ T++F +LL+ + N ++++ VA++S I Q V V
Sbjct: 339 VNEVPNRRQTLMFTATWPKEVRKIAADLLVKPVQVNIGNVDELVANKS--ITQHVEVLPP 396
Query: 410 DEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK--DSKFQNLVSTLKCKGYSISTGSNCI 467
E++ + L+H + + K D +NL S
Sbjct: 397 MEKQ-----RRLEHILRSQDSGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDK-SQAE 450
Query: 468 VSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHT 527
H+ N GR P + D ++++ VV+ DF +++YV + R
Sbjct: 451 RDHVLNQFRT-GRS-PVLVATDV-AARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAG 507
Query: 528 VSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+G+ ++FF DA +A +I++LE Q VP LRD+ S
Sbjct: 508 ATGLAYTFFGDHDAKYASDLIKVLEGANQKVPPELRDMSSRS 549
>gi|348509262|ref|XP_003442169.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oreochromis
niloticus]
Length = 909
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 133/322 (41%), Gaps = 14/322 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E ++ + CK KA+ + +V+++ G ++ Q L+ E +V TP
Sbjct: 325 GPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGA-EIVVCTP 383
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ V KA + V+ LV D D + +R S +P T++F+
Sbjct: 384 GRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 443
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
+++L+ I + + A++ + + V SD+ L V + G
Sbjct: 444 IERLARDILVDPIRVVQGDIGEANEDVTQVVEMLVSGSDKWGWLTRRLVEFTSTG----- 498
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
VL V K + + L + L +GYS+ + +N V +D +K+ ++ D
Sbjct: 499 ---SVLIFVTKKANCEELATNLNQEGYSLGLLHGDMDQSERNKVISDFKKKNLPVLVATD 555
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ ++ V+ D + + + R G+ ++ T D + AG ++
Sbjct: 556 VAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDTSFAGDLVRN 615
Query: 551 LEQCGQVVPDALRDLCHTSPML 572
LE Q V L DL +P
Sbjct: 616 LEGANQSVSKELMDLAMQNPWF 637
>gi|157119649|ref|XP_001653435.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875244|gb|EAT39469.1| AAEL008738-PA [Aedes aegypti]
Length = 911
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 182/433 (42%), Gaps = 40/433 (9%)
Query: 149 ERAEVHLNGKSCANGHHGQACEKLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGI 208
ER ++ + G S H Q E+ + P +N I N M NP + + G
Sbjct: 213 ERMQITVMGNSVP--HPSQDFEEGNFPD----FVMNEI-NKMGFP-----NPTAIQAQG- 259
Query: 209 EFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ + + A + EG P +L L ++
Sbjct: 260 --WPIALSGRDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQRGEG-----PVVLVLAPTR 312
Query: 267 EKAAKVRSVCKPLKAFGIHTVSL------HPGAAIDHQITGLRSCEPEFLVSTPERLLKL 320
E A ++++V ++ FG H+ L GA Q+ L E +++TP RL+
Sbjct: 313 ELAQQIQTV---VRDFGTHSKPLIRYTCIFGGALKGPQVRDLERGV-EVVIATPGRLIDF 368
Query: 321 VSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQN 378
+ ++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 369 LERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAE 428
Query: 379 LLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLY 438
L ++++ S + I Q V+VC + EK K + +L D +S K++
Sbjct: 429 DFLHDYIQINIGSLNLSANHNIHQIVDVC-EEGEKEGKLLSLLKEISSD-VNS---KIII 483
Query: 439 IVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-E 497
V K ++L+ + GY ++ ++ V D R + ++ D + +
Sbjct: 484 FVETKKKVEDLLKNIVRDGYGATSIHGDKSQSERDYVLQDFRHGKSTILVATDVAARGLD 543
Query: 498 LEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQV 557
+E+ + VI D+ S ++Y+ + R + G ++FFT + A +++ +LE+ GQ
Sbjct: 544 VEDVKYVINFDYPNSSEDYIHRIGRTGRCSSYGTAYTFFTPGNGRQARELLSVLEEAGQQ 603
Query: 558 VPDALRDLCHTSP 570
L DL +P
Sbjct: 604 PTAQLIDLAKQAP 616
>gi|361128136|gb|EHL00089.1| putative ATP-dependent RNA helicase dbp3 [Glarea lozoyensis 74030]
Length = 526
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 162/364 (44%), Gaps = 23/364 (6%)
Query: 209 EFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
E W S+ +D++ +GS T+ A+ V A ++ G GP + + ++
Sbjct: 141 ETWPYLSAGRDLIGVAETGSGKTM---AFAVPCARHILSLP---GGKNKGPRAVIISPTR 194
Query: 267 EKAAK-VRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A + V K G+ V ++ G D Q LR+ + +V+TP RL L++
Sbjct: 195 ELAMQSYEQVMLLAKVSGLQAVCVYGGVPKDEQRRALRTAD--IVVATPGRLNDLINEGC 252
Query: 326 IDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLG 382
D+S +V+D D L KG + + I + S + T++F SV A+ + +
Sbjct: 253 ADLSKAKYVVLDEADRMLDKGFEEEIRKIINTTSTERQTLMFTATWP-ESVRALASTFMK 311
Query: 383 SINRLSLNQSVASQ---SACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYI 439
+ R+++ + +A I+Q V V K + +Q+L + + V +
Sbjct: 312 TPLRITIGDNPTGDLRANARIVQKVEVV-DPRNKEYRLMQLLKQYQSGAQKDDRILVFAL 370
Query: 440 VGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE 499
K++ + ++ KG+ ++ G + +S + + + K+ ++ ++ L+
Sbjct: 371 YKKEA--TRVEGFIRSKGFRVA-GIHGDLSQEQRTRSLEAFKQGGTPILVATDVAARGLD 427
Query: 500 EYEVVIVP-DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
V ++ F +++++YV + R G+ + FT+ D A +G +I +L+ Q V
Sbjct: 428 IPAVKLINCTFPLTVEDYVHRIGRTGRAGKEGLAITLFTEHDKAQSGALINVLKAANQPV 487
Query: 559 PDAL 562
PD L
Sbjct: 488 PDEL 491
>gi|432867546|ref|XP_004071236.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oryzias latipes]
Length = 903
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 132/322 (40%), Gaps = 14/322 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E ++ + CK KA+ + +V+++ G ++ Q L+ E +V TP
Sbjct: 324 GPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGA-EIVVCTP 382
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ V KA + V+ LV D D + +R S +P T++F+
Sbjct: 383 GRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 442
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
+++L+ I + + A++ + + + SD+ L V + G
Sbjct: 443 IERLARDILVDPIRVVQGDIGEANEDVTQVVEILLSGSDKWAWLTRRLVEFTSAG----- 497
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
VL V K + L + L +GYS+ + +N V +D +K+ ++ D
Sbjct: 498 ---SVLIFVTKKANSDELAANLTQEGYSLGLLHGDMDQSERNKVISDFKKKNLPILVATD 554
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ ++ V+ D + + + R G+ ++ T D + AG ++
Sbjct: 555 VAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDTSFAGDLVRN 614
Query: 551 LEQCGQVVPDALRDLCHTSPML 572
LE Q V L DL +P
Sbjct: 615 LEGANQAVSKELMDLAMQNPWF 636
>gi|398411885|ref|XP_003857276.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
gi|339477161|gb|EGP92252.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
Length = 1145
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 53/341 (15%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
+ GP L + ++E A ++ CKP LKA G+ V + GA I QI L+ E +V
Sbjct: 567 NLEGPIGLIMAPTRELAVQIHRECKPYLKALGLRGVCAYGGAPIKEQIGELKRGA-EVIV 625
Query: 312 STPERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFN 365
TP R++ L+ S + ++ VS +V+D D + G + + + +P TV+F+
Sbjct: 626 CTPGRMIDLLAANSGRVTNLRRVSYVVLDEADRMFDMGFEPQITKMLGNIRPDRQTVLFS 685
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVL-DHA 424
+ L + L +SV + I Q + V +E K ++ +Q+L D
Sbjct: 686 ATFPKKMESLARKALTKPVEILVGGRSVVAPE--ITQMIEV-RPEETKFVRTLQLLGDLI 742
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
GD E + L V + + L KGY SV G +
Sbjct: 743 EGD----EEARSLIFVERQETADLIFKQLGKKGYP--------------SVSVHGGR--- 781
Query: 485 VSMIDKDH-------------ISTA------ELEEYEVVIVPDFIISMKNYVEILTSMAR 525
ID+D ++T+ ++++ ++VI D ++YV R
Sbjct: 782 -EQIDRDQAIIDFKAGIFPIMVATSVAARGLDVKQLKLVINYDCPNHGEDYVHRAGRTGR 840
Query: 526 HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+G +F T +AG ++ LE Q VPD LR++
Sbjct: 841 AGNTGTAVTFVTPAQERYAGFLVRALEDSKQEVPDELREMA 881
>gi|302414752|ref|XP_003005208.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
gi|261356277|gb|EEY18705.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
Length = 1145
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 144/336 (42%), Gaps = 51/336 (15%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ V + GA I QI L+ E +V TP
Sbjct: 592 GPIGLIMTPTRELAVQIHRDCKPFLKPMGMRAVCAYGGAPIKDQIADLKRGA-EIVVCTP 650
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ + ++ VS +V+D D + G +++ + +P T++F+
Sbjct: 651 GRMIDLLGANQGRVTNLRRVSYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 707
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
++P + + L + + + +V +S + I + ++VLD GD
Sbjct: 708 --ATMPRIIDSLTKKVLKSPVEVTVGGRSVVAPE-----------ITQKVEVLDE--GDK 752
Query: 429 FH------------SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSV 475
F E + L V + K +L+ L KGY C+ H K+ V
Sbjct: 753 FFHLLGLLGELYEEDEDARSLIFVERQEKADDLLKELMTKGYP------CMSIHGGKDQV 806
Query: 476 EADGR----KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVS 529
+ D K+ V ++ ++ L+ + ++V+ D +++YV R
Sbjct: 807 DRDSTISDFKKGIVPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNK 866
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
G ++ T + A + + LEQ GQ VP+ L ++
Sbjct: 867 GTAVTYITSEQENCAPGIAKALEQSGQPVPERLNEM 902
>gi|10177293|dbj|BAB10554.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 564
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 146/329 (44%), Gaps = 38/329 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ + G+ + ++ GA QI LR E +++TP
Sbjct: 211 GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGV-EIVIATP 269
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFN------ 365
RL+ ++ + ++ V+ LV+D D + IR+ +S +P T++++
Sbjct: 270 GRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPRE 329
Query: 366 -DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQ 419
+ L + ++GS + L NQS+ Q + + + E+ +LK Q
Sbjct: 330 VETLARQFLRDPYKAIIGSTD-LKANQSIN-------QVIEIVPTPEKYNRLLTLLK--Q 379
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG 479
++D + K+L V + L+ G+ ++ V A+
Sbjct: 380 LMDGS----------KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEF 429
Query: 480 RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ + M D + ++++ + V+ DF ++++Y+ + R G+ +FFT
Sbjct: 430 KSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTH 489
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLCH 567
D+A A ++++IL++ GQVVP L L
Sbjct: 490 DNAKFARELVKILQEAGQVVPPTLSALVR 518
>gi|403160809|ref|XP_003321253.2| hypothetical protein PGTG_02295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170406|gb|EFP76834.2| hypothetical protein PGTG_02295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 546
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 167/394 (42%), Gaps = 33/394 (8%)
Query: 184 NAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIV-QIAWIVATA 240
+ I + +R+ G +P+ +W + S +D++ S GS TI I ++
Sbjct: 120 DYIMSEIRNAGFNAPSPIQCQAWPMAL-----SGRDVVAVSATGSGKTIAFSIPAMIHIN 174
Query: 241 ADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQI 299
A + GP +L L ++E A +++ C A I ++ G QI
Sbjct: 175 AQPLLAPGD------GPIVLILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQI 228
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSIS 356
L + E +++TP RL+ ++ + ++ V+ LV+D D L G + I + I
Sbjct: 229 RDL-TRGAEIVIATPGRLIDMLESRKTNLHRVTYLVMDEADRMLDMGFEPQIKKIVEQIR 287
Query: 357 GKPHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEK 413
T++F + T VQ L L ++++ + + I Q V VC SD EK
Sbjct: 288 PDRQTLMF----SATWPKEVQRLASEYLKDFIQVNVGSLDLTANINITQIVEVC-SDFEK 342
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN 473
K I+ L+ SE KVL VG +L L+ G+ ++
Sbjct: 343 RGKLIKHLEK-----ISSESAKVLIFVGTKRVADDLTKYLRQDGWPSLAIHGDKQQQERD 397
Query: 474 SVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGIL 532
V + + + MI D S ++++ VI D +++Y+ + R +G
Sbjct: 398 WVLEEFKSGRSPIMIATDVASRGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTA 457
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+S+ + D + A ++++IL Q+VP AL ++
Sbjct: 458 YSYISADQSKLARELVKILRDAKQIVPSALVEMA 491
>gi|330812846|ref|XP_003291328.1| hypothetical protein DICPUDRAFT_38798 [Dictyostelium purpureum]
gi|325078508|gb|EGC32156.1| hypothetical protein DICPUDRAFT_38798 [Dictyostelium purpureum]
Length = 692
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 211 WKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPF---------- 258
W D++ TS GS T+ +A ++ + R +++ F P+
Sbjct: 226 WPAILCGNDMIGTSLPGSGKTLGYLAPMIPHCLARMNRSQQQKQQFKDPYQEKKQKNSDL 285
Query: 259 -LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
+L LV ++E +V + K + + FGI ++++ G QI L+ +P+ L+STP R
Sbjct: 286 LVLVLVPTRELGLQVFNNFKLINQLFGIKALAIYGGIPKPLQIEQLQREKPQILISTPGR 345
Query: 317 LLKLVSLKAIDVSGVSLLVVDRLDS-LSKG 345
L++++ L +++S +++LV+D D LSKG
Sbjct: 346 LIEMIDLGHVNLSTITMLVLDEADKMLSKG 375
>gi|346979464|gb|EGY22916.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
dahliae VdLs.17]
Length = 1182
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 144/336 (42%), Gaps = 51/336 (15%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ V + GA I QI L+ E +V TP
Sbjct: 650 GPIGLIMTPTRELAVQIHRDCKPFLKPMGMRAVCAYGGAPIKDQIADLKRGA-EIVVCTP 708
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ + ++ VS +V+D D + G +++ + +P T++F+
Sbjct: 709 GRMIDLLGANQGRVTNLRRVSYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 765
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
++P + + L + + + +V +S + I + ++VLD GD
Sbjct: 766 --ATMPRIIDSLTKKVLKSPVEVTVGGRSVVAPE-----------ITQKVEVLDE--GDK 810
Query: 429 FH------------SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSV 475
F E + L V + K +L+ L KGY C+ H K+ V
Sbjct: 811 FFHLLGLLGELYEEDEDARSLIFVERQEKADDLLKELMTKGYP------CMSIHGGKDQV 864
Query: 476 EADGR----KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVS 529
+ D K+ V ++ ++ L+ + ++V+ D +++YV R
Sbjct: 865 DRDSTISDFKKGIVPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNK 924
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
G ++ T + A + + LEQ GQ VP+ L ++
Sbjct: 925 GTAVTYITSEQENCAPGIAKALEQSGQPVPERLNEM 960
>gi|3775989|emb|CAA09197.1| RNA helicase [Arabidopsis thaliana]
Length = 411
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 27/319 (8%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V + + G+ ++ ++ G++ QI+ +RS + ++ TP
Sbjct: 66 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGV-DIVIGTPG 124
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
RL L+ + +S VS +V+D D + +R +S N A
Sbjct: 125 RLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNT------NKVRQMVMFSA 178
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH------- 428
L +++L+ + II SV++ A+ + +++ I+VLD D
Sbjct: 179 TWPL---DVHKLAQEFMDPNPIKVIIGSVDLAANHD--VMQIIEVLDERARDQRLIALLE 233
Query: 429 -FH-SEPLKVLYIVGKDSKFQNLVSTLKCKGY-SISTGSNCIVSHIKNSVEADGRKRPAV 485
+H S+ +VL + + L L+ +G+ ++S N S S+ K +
Sbjct: 234 KYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSL--FKEGSC 291
Query: 486 SMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ + EVVI F ++ ++YV + R G+ H+FFT +
Sbjct: 292 PLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGL 351
Query: 544 AGQMIEILEQCGQVVPDAL 562
AG+++ +L + GQVVP L
Sbjct: 352 AGELVNVLREAGQVVPADL 370
>gi|302782315|ref|XP_002972931.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
gi|300159532|gb|EFJ26152.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
Length = 534
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 138/328 (42%), Gaps = 32/328 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP +L L ++E A +++ FG I + ++ GA QI L+ E ++
Sbjct: 163 GPIVLVLAPTRELAVQIQQESA---KFGSSSKIKSTCIYGGAPKGPQIRDLQRGV-EIVI 218
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ ++ + ++ V+ LV+D D + IR+ + +P T+
Sbjct: 219 ATPGRLIDMLEGRHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLYWSATW 278
Query: 371 T-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
V + N L ++++ S + I Q V V +D EK K I++LD
Sbjct: 279 PKDVEQLANQFLHDPYKVTIGSSSLKANHSIAQHVEVV-NDYEKYQKLIKLLDE------ 331
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEADGRK 481
+ K+L + + L+ +G+ + ++S K K
Sbjct: 332 FMDGGKILIFMETKRGCDQVTKQLRMEGWPALSIHGDKSQAERDWVLSEFKTG------K 385
Query: 482 RPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
P ++ D ++++ VI DF S ++YV + R G ++FFT +A
Sbjct: 386 SPIMTATDV-AARGLDVKDIRYVINYDFPGSCEDYVHRIGRTGRAGAKGTAYTFFTVSNA 444
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHTS 569
HA +++ IL + GQ + L+ + + S
Sbjct: 445 KHARELVSILSEAGQRITPELQSMVNCS 472
>gi|431892646|gb|ELK03079.1| Putative ATP-dependent RNA helicase DDX46 [Pteropus alecto]
Length = 1580
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 692 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 743
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 744 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 798
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 799 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 857
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 858 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 912
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 913 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 964
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 965 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 1023
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 1024 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTTVPPDLEKL 1080
>gi|391342263|ref|XP_003745440.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Metaseiulus occidentalis]
Length = 510
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 138/318 (43%), Gaps = 10/318 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++++V + G+ + GA Q+ L E ++TP
Sbjct: 162 GPIALVLAPTRELAQQIQTVADTFGRPAGVRNTCVFGGAPKGPQLRDLERGV-EICIATP 220
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + D+ + LV+D D + IR+ I +P V T+
Sbjct: 221 GRLIDFLEAGKTDLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 280
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V ++ L ++++ S + I+Q ++VC S+ EK K I +L+ + +
Sbjct: 281 VKSLAEDFLKDYIQINIGALQLSANHRILQIIDVC-SESEKDSKLINLLEEIMNEKEN-- 337
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + K + ++ G+ ++ V + R + ++ D
Sbjct: 338 --KTIVFAETKRKVDEITRRMRRDGWPAMCIHGDKAQQERDWVLHEFRSGKSPILVATDV 395
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++++ + VI D+ ++YV + AR +G ++FFT ++A A ++I++L
Sbjct: 396 AARGLDVDDVKFVINYDYPNCSEDYVHRIGRTARSNKTGTAYTFFTSNNAKQAQELIDVL 455
Query: 552 EQCGQVVPDALRDLCHTS 569
++ QVV L +L ++
Sbjct: 456 QEAKQVVNPKLYELADSA 473
>gi|115910860|ref|XP_001177628.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Strongylocentrotus purpuratus]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 139/315 (44%), Gaps = 26/315 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +V+ V AFG I + ++ GA QI L E +
Sbjct: 183 GPIALVLAPTRELAQQVQQVAF---AFGRSSKIKSTCVYGGAPKGQQIRDLERGV-EICI 238
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ + ++ + +V+D D + IR+ + +P V T+
Sbjct: 239 ATPGRLIDFLENNKTNLRRCTYVVLDEADRMLDMGFEPQIRKIMEQIRPDRQVQMWSATW 298
Query: 371 T------SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ +++ ++ +I L+L S + I+Q ++VC D EK K IQ+L+
Sbjct: 299 PKDVRNLAEDFIRDYIMVNIGSLTL-----SANHNILQIIDVC-EDSEKDKKLIQLLEEI 352
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ K L + +LV ++ G+ ++ V ++ R A
Sbjct: 353 ----MQEKDNKTLVFCETKRRTDDLVRRMRRDGWPAMCLHGDKSQPERDWVLSEFRDGRA 408
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D S ++ + + VI D+ S ++YV + AR T +G ++FFT+++
Sbjct: 409 PILVATDVASRGLDVTDIKFVINYDYPNSSEDYVHRIGRTARSTRTGTAYTFFTRNNMKQ 468
Query: 544 AGQMIEILEQCGQVV 558
A +I +L++ QV+
Sbjct: 469 AADLINVLQEAKQVI 483
>gi|307204940|gb|EFN83479.1| Probable ATP-dependent RNA helicase DDX43 [Harpegnathos saltator]
Length = 633
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 156/388 (40%), Gaps = 34/388 (8%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIAR 246
+R G ++ +P+ +W I S +D++ +T + + ++ S R
Sbjct: 239 IRKQGFQKPSPIQCQAWPILL-----SGQDLIGIAQTGTGKTLAFLLPALIHIDGQSTPR 293
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCE 306
E++G P +L + ++E A ++ GI V ++ G QI + +
Sbjct: 294 SERKG-----PNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYGGGNRKEQIN-IVTKG 347
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQS---ISGKPHTVV 363
+ +++TP RL LV K +DV+ V+ L++D D + IR++ + TV
Sbjct: 348 VQIVIATPGRLNDLVQAKVLDVTSVTYLILDEADRMLDMGFEPQIRKTLLDVRSDRQTV- 406
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN--VCASDEEKILKGIQVL 421
+T + P L S + + V S + +V V DEE+
Sbjct: 407 ----MTSATWPQGVRRLAQSYMKNPIQVFVGSLDLVAVHTVTQRVYLIDEEE-------K 455
Query: 422 DHAYGDHFHSEPL--KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG 479
++ D F + KV+ GK + ++ S L G + + D
Sbjct: 456 NNMMFDFFREMGVNDKVIVFFGKKAMVDHVASDLAVAGIECQSIHGDRDQCDREQALEDM 515
Query: 480 RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ ++ D S ++E+ V+ DF ++ YV + R +G +F T+
Sbjct: 516 KTGNVHILLATDVASRGLDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTR 575
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
D +HA Q+I ILE+ Q VP L +
Sbjct: 576 KDWSHAQQLINILEEAHQEVPGELYKMA 603
>gi|449440640|ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
gi|449522189|ref|XP_004168110.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
Length = 622
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 165/409 (40%), Gaps = 52/409 (12%)
Query: 176 SKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI 233
+ F CL+ I G + P+ W + +D+ + +GS T+ +
Sbjct: 206 ANFPAYCLDVIAKL----GFVEPTPIQAQGWPMAL-----KGRDLVGIAETGSGKTLAYL 256
Query: 234 --AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIH----TV 287
A I +A ++R E GP +L L ++E A +++ FG+H +
Sbjct: 257 LPAVIHISAQPRLSRGE-------GPIVLVLAPTRELAVQIQQEAT---KFGLHANIRST 306
Query: 288 SLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDT 347
++ GA QI L++ E +++TP RL+ ++ ++ V+ LV+D D +
Sbjct: 307 CVYGGAPKGPQIRDLKNGV-EIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 365
Query: 348 LSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN 405
IR +S +P T+ V + L + ++ + + I Q V
Sbjct: 366 EPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVE 425
Query: 406 VCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI----- 460
V + EK + I++L ++L V + L+ G+
Sbjct: 426 VL-PEAEKYRRLIKLLGEVMDGS------RILIFVETKKGCDKVTRQLRMDGWPALSIHG 478
Query: 461 ---STGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYV 517
+ ++S K+ + P ++ D ++++ + VI DF S+++YV
Sbjct: 479 DKKQAERDLVLSEFKSG------RNPIMTATDV-AARGLDVKDIKCVINFDFPSSLEDYV 531
Query: 518 EILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ R G +FFT ++A HA +I+IL + GQ+V AL L
Sbjct: 532 HRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALA 580
>gi|388580956|gb|EIM21267.1| p68 RNA helicase [Wallemia sebi CBS 633.66]
Length = 546
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 142/316 (44%), Gaps = 13/316 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ C K+ I ++ G QI L E +++TP
Sbjct: 194 GPIALILAPTRELAVQIQEECTKFGKSSRIRNTCVYGGVPKGPQIRDLVRGA-EIVIATP 252
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYT 371
RL+ ++++ ++ V+ LV+D D + IR + I T++F+
Sbjct: 253 GRLIDMLNMGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVEQIRPDRQTLMFSATWP-K 311
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V A+ + L ++ ++++ S + + Q + VC SD +K +G +++ H D
Sbjct: 312 EVKALAHDFLTNMIQVNIGSLELSANHNVKQIIEVC-SDFDK--RG-RLVTHL--DQISQ 365
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
E KVL +G +L L+ G+ ++ V ++ + + M+ D
Sbjct: 366 ENAKVLIFIGTKRIADDLTKYLRQDGWPALAIHGDKQQQERDWVLSEFKSGRSPIMLATD 425
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++++ VI DF ++++Y+ + R G +FFT ++A + +++I
Sbjct: 426 VASRGLDVKDIGYVINYDFSSNVEDYIHRIGRTGRAGTKGTSITFFTTENAKSSRDLVKI 485
Query: 551 LEQCGQVVPDALRDLC 566
L + Q VP L ++
Sbjct: 486 LREANQNVPPELEEMA 501
>gi|383852804|ref|XP_003701915.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Megachile
rotundata]
Length = 609
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 136/323 (42%), Gaps = 26/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V ++ G+ + GA Q L E ++TP
Sbjct: 186 GPVALILAPTRELAQQIQEVANCFGESSGVRNTCIFGGAPKGPQAHDLERGV-EICIATP 244
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 245 GRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 304
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V A+ L L++ S + IIQ V+VC + EK LK ++L + +
Sbjct: 305 VRALAEDFLTDYMHLNIGSLTLSANHNIIQIVDVC-QEFEKDLKLYRLLQEI----GNEK 359
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD--------GRKRPA 484
K + V K ++ ++ G+ + + KN E D GR A
Sbjct: 360 ENKTIIFVETKRKVDDITRNIRRDGWQALS-----IHGDKNQQERDHVLQEFKSGR---A 411
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++++ + VI D+ S ++Y+ + R +G ++FFT + H
Sbjct: 412 PILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKH 471
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
AG +IE+L + GQ + L ++
Sbjct: 472 AGDLIEVLREAGQNINPRLTEMA 494
>gi|347525065|ref|YP_004831813.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
gi|345284024|gb|AEN77877.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
Length = 419
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 209 EFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
E + + KD+L S + S T A ++ EK GP LL + SQE
Sbjct: 23 EVYPLLAQGKDVLGLSPTGSG--------KTLAYALPLLEKV-LKGDGPQLLIIAPSQEL 73
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
AA++ V +P K + T ++ GA + QI LR PE +V TP RLL L K +
Sbjct: 74 AAQLADVIRPWGKLLELKTAAIIGGANVKRQIEKLRKDRPEVIVGTPGRLLNLADEKRLK 133
Query: 328 VSGVSLLVVDRLDS-LSKGDTLSLIRQSIS 356
+ + +V+D D L++ +TL+ R+ +S
Sbjct: 134 LHNLEAIVIDEADEMLAQEETLADCRKLVS 163
>gi|410903051|ref|XP_003965007.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Takifugu
rubripes]
Length = 872
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 136/330 (41%), Gaps = 14/330 (4%)
Query: 248 EKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCE 306
+KE + GP + + ++E ++ + CK KA+ + +V+++ G ++ Q L+
Sbjct: 311 QKELEAGEGPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGA 370
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVV 363
E +V TP RL+ V KA + V+ LV D D + +R S +P T++
Sbjct: 371 -EIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLL 429
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
F+ +++L+ I + + A++ + + + SD+ L V
Sbjct: 430 FSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVEMLLSGSDKWSWLTRRLVEFT 489
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
+ G VL V K + + L + L +GYS+ + +N V +D +K
Sbjct: 490 SSG--------SVLIFVTKKTNSEELAANLTQEGYSLGLLHGDMDQSERNKVISDFKKNN 541
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
++ D + ++ VI D + + + R G+ ++ T D+
Sbjct: 542 MPVLVATDVAARGLDIPSIRTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDST 601
Query: 543 HAGQMIEILEQCGQVVPDALRDLCHTSPML 572
AG ++ LE Q V L DL +P
Sbjct: 602 FAGDLVRNLEGANQAVSKELMDLAMQNPWF 631
>gi|57899404|dbj|BAD88051.1| putative ATP-dependent RNA helicase DB10 [Oryza sativa Japonica
Group]
gi|215694706|dbj|BAG89897.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 583
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 42/331 (12%)
Query: 255 TGPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVS 312
+GP +L L ++E A ++ K ++ I + L+ GA Q+ L R + +V+
Sbjct: 12 SGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVD--VVVA 69
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLT 369
TP RL ++ ++ I + VS LV+D D + IR+ I + T+++
Sbjct: 70 TPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWP 129
Query: 370 YTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLD 422
++LL +GS++ L N ++ I S EK+ + Q+L
Sbjct: 130 KEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPS--------EKLRRLEQIL- 180
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSISTGSNC------IVSHIKNSV 475
KVL L TL + G S G ++SH ++
Sbjct: 181 -----RSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSG- 234
Query: 476 EADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ P + D ++++ VVI DF +++YV + R +G+ ++F
Sbjct: 235 -----RSPILVATDV-AARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTF 288
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
F D+ +A +I+ILE Q VP L D+
Sbjct: 289 FCDQDSKYAADLIKILEGANQRVPRDLADMA 319
>gi|75061689|sp|Q5R6D8.1|DDX46_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|55731939|emb|CAH92678.1| hypothetical protein [Pongo abelii]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 173/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L+ I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALVRRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|223997538|ref|XP_002288442.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975550|gb|EED93878.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 421
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 39/339 (11%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P +L L ++E A + + V + K + ++ ++ G Q LR + +V TP
Sbjct: 63 PRMLVLAPTRELAMQSQKVLEEFGKVVNLSSLVIYGGVPKPAQKDILRKGV-DCIVCTPG 121
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-----KPHTVVFNDCLTY 370
RL LV+ + D+S +S LV+D D + +R IS + T +F +
Sbjct: 122 RLKDLVNEGSCDLSNISHLVLDEADRMLDMGFEEDVRYIISQCKEKEQRQTAMF----SA 177
Query: 371 TSVPAVQNLLLGSINR-----LSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
T A+Q L L + + V S S++ S +++ + ++V++
Sbjct: 178 TWPAAIQQLALEFMMEPICIYVGFESIVGSNGE---NSIDDSLSANKRVSQTVEVIE--- 231
Query: 426 GDHFHSEPLKVL---YIVGKDSKFQNLVSTL------KCKGYSISTGSNCIVSHIKNSVE 476
D E L+ L Y GK + LV L + +G G +C H + +
Sbjct: 232 -DRAREERLRELIKKYTGGKRKNDRILVFALYKKEAARIEGTLNRWGFSCASIHGDKTQD 290
Query: 477 ADGR-----KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVS 529
A R K + ++ ++ L+ + EVV+ F +++++YV + R S
Sbjct: 291 ARNRALAEFKDGSCPILVATDVAARGLDIPDVEVVLNYTFPLTIEDYVHRIGRTGRAGKS 350
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
GI ++FF D +HAG++ +++ Q GQ +PD L T
Sbjct: 351 GISYTFFQPGDKSHAGELQQVMRQAGQDIPDELMKFGST 389
>gi|295669632|ref|XP_002795364.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285298|gb|EEH40864.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 532
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 148/327 (45%), Gaps = 25/327 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 39 GPIGLVMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 97
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L++ A V+ V+ +V+D R+ + + I ++ + TV+F+
Sbjct: 98 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNVRPQRQTVLFSATF 157
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V +++ K ++ + +L Y D
Sbjct: 158 PRNMEALARKTLTKPVEIVVGGRSVVAPE--ITQIVEV-RNEDTKFVRLLALLGDLYADD 214
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAVSM 487
++E + L V + L+ L KGY C+ H K+ V+ D +
Sbjct: 215 -NNEDARTLIFVDRQEAADGLLRDLMHKGYP------CMSIHGGKDQVDRDSTIADFKAG 267
Query: 488 IDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ I+T+ ++++ ++VI D +++YV R +G +F T+
Sbjct: 268 VFPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEVQE 327
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCHT 568
++ + + L+Q GQ VP+A++ + ++
Sbjct: 328 RYSVDISKALKQSGQQVPEAVQKMVNS 354
>gi|406601713|emb|CCH46674.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 588
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 170/376 (45%), Gaps = 38/376 (10%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFS-FTGPFLLFLVSSQEKAAKV 272
S KDI+ +GS T+ A+++ + + FS GP+ L LV ++E A ++
Sbjct: 221 SKKDIIGIAETGSGKTL---AYLIPMLSKLLKLPRLNEFSKADGPYGLILVPTRELAQQI 277
Query: 273 RSVCKPLKAF--GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSG 330
K F I +SL G I+ I L++ E +++TP RL+ + + ++
Sbjct: 278 EIEFKKFSKFLPSIDIISLVGGKLIEKNILDLQNKTIEIIIATPGRLIDCLERHILVLNQ 337
Query: 331 VSLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLT---------YTSVPAVQN 378
+ LV+D D + + GD ++ I + ++ K ++F +T Y + PA+ N
Sbjct: 338 IQFLVLDESDKMIEMNFGDQVAKITEFMNLKRQNMMFTATMTLEVEKLSKNYVNDPAIIN 397
Query: 379 LLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLY 438
+ + N + +N + + S N+ D +KI K I++L G+ + S P+ +++
Sbjct: 398 IGNVNSNEMIINDRIEQKFEFFNNSNNINEIDSKKISKLIKILS---GNKYKS-PI-IIF 452
Query: 439 IVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD----GRKRPAVSMIDKDHIS 494
I K++ + L +G+ +S I+ KN + + K V ++ +++
Sbjct: 453 INYKETG-DFIFKKLSDQGFKVS-----IIHGSKNQEQREFAIKQLKDGKVDILIGTNVA 506
Query: 495 TAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKD-DAAHAGQMIEIL 551
+ ++ V +V +F ++ K +Y+ + R G +F + D + +IL
Sbjct: 507 SRGIDIPNVSLVLNFQMTKKIDDYIHRVGRTGRAGSYGTSITFLNDESDFEIYNDLKKIL 566
Query: 552 EQCGQVVPDALRDLCH 567
+ G +PD + L +
Sbjct: 567 IKSGNKIPDEFKKLNN 582
>gi|367002065|ref|XP_003685767.1| hypothetical protein TPHA_0E02410 [Tetrapisispora phaffii CBS 4417]
gi|357524066|emb|CCE63333.1| hypothetical protein TPHA_0E02410 [Tetrapisispora phaffii CBS 4417]
Length = 523
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 133/303 (43%), Gaps = 31/303 (10%)
Query: 282 FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS 341
G+H ++ G D Q T L+ + +V+TP RLL L+ ++D+S V+ LV+D D
Sbjct: 209 LGLHCCCVYGGVPKDPQRTQLKVSQ--VVVATPGRLLDLLQEGSVDLSNVNYLVLDEADR 266
Query: 342 -LSKG---DTLSLIRQSISGKPHTVVFNDC-------LTYTSVPAVQNLLLGSINRLSLN 390
L KG D ++IR++ S T++F L T + + +G+ + L+ N
Sbjct: 267 MLEKGFEEDIKNIIRETASVGRQTLMFTATWPKEVRELASTFMERPVKVSIGNRDELTAN 326
Query: 391 QSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK---VLYIVGKDSKFQ 447
+ + I++ ++ D K+L ++ +HS P K VL +
Sbjct: 327 KRITQ----IVEVIDPFKKDR-KLLDLLK--------KYHSGPKKDEKVLIFALYKKEAS 373
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIV 506
+ L+ GY ++ + + + + ++ D + ++ + VI
Sbjct: 374 RVERNLQYNGYQVAAIHGDLSQQQRTQALNEFKSGKCNLLLATDVAARGLDIPNVKTVIN 433
Query: 507 PDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL- 565
F +++++YV + R +G H+ FT+ + AG ++ IL Q VP+ L+
Sbjct: 434 LTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNILNGANQPVPEELKKFG 493
Query: 566 CHT 568
HT
Sbjct: 494 THT 496
>gi|255728265|ref|XP_002549058.1| hypothetical protein CTRG_03355 [Candida tropicalis MYA-3404]
gi|240133374|gb|EER32930.1| hypothetical protein CTRG_03355 [Candida tropicalis MYA-3404]
Length = 531
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 29/291 (9%)
Query: 287 VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG 345
V+++ G + D QI +++ +V+TP RL+ L++ AI++S + LV+D D L KG
Sbjct: 221 VAVYGGVSKDEQIQKIKTAN--VVVATPGRLVDLINDGAINLSNIDYLVLDEADRMLEKG 278
Query: 346 ---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL-------LGSINRLSLNQSVAS 395
D +I + + T++F N + +G + LS N+ +
Sbjct: 279 FEEDIKRIISSTNAEDRQTLMFTATWPKEVRELANNFMKSPIKVTVGDRDELSANKRITQ 338
Query: 396 QSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD--SKFQNLVSTL 453
I++ VN D+EK L I +L G++ SE +++ + K S+ +NL+
Sbjct: 339 ----IVEVVN--KFDKEKKL--INLLHKYQGNNNDSENKILVFALYKKEASRIENLLKRN 390
Query: 454 KCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFII 511
+ + +I +S + + + K +++ ++ L+ +VVI F +
Sbjct: 391 RFQVAAIHGD----LSQQQRTQALNSFKSGQCNLLLATDVAARGLDIPNVKVVINLTFPL 446
Query: 512 SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
++++YV + R +GI H+ FT+D+ +G + IL Q VPD L
Sbjct: 447 TIEDYVHRIGRTGRAGKTGIAHTLFTEDEKHLSGALCNILRGANQPVPDEL 497
>gi|341876171|gb|EGT32106.1| hypothetical protein CAEBREN_19765 [Caenorhabditis brenneri]
Length = 569
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 31/372 (8%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +DI+ +GS T+ + + R+ EG P +L L+ ++E
Sbjct: 167 WPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQPHRQRGEG-----PSVLVLLPTREL 221
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +V+ V + G+ L GA+ Q L + V+TP RLL + +
Sbjct: 222 AQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGV-DIAVATPGRLLDFLDNGTTN 280
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYTSVPAVQNLLLGSI 384
+ S LV+D D + IR+ I +P T++F+ V ++ +
Sbjct: 281 MKRCSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMFSATWP-KEVRSLASDFQKDA 339
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
L++ + + I Q V+V + K K +++L+H + + K + V
Sbjct: 340 AFLNVGSLELAANHNITQVVHVL-EEHAKTAKLMELLNHI----MNQKDCKTIIFVETKR 394
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD-------GRKRPAVSMIDKDHISTAE 497
K L T++ G+ + CI KN E D K P + D +
Sbjct: 395 KADELTRTMRRDGWP----TLCIHGD-KNQGERDWVLQEFKAGKTPIMLATDV-AARGLD 448
Query: 498 LEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQV 557
+++ + VI D+ + ++YV + R G ++FFT +AA A ++++L++ Q
Sbjct: 449 VDDIKFVINYDYPNNSEDYVHRIGRTGRRDQKGTAYTFFTHTNAAKAKDLLKVLDEAKQE 508
Query: 558 VPDALRDLCHTS 569
VP ALRD+ + S
Sbjct: 509 VPQALRDMGNRS 520
>gi|358338001|dbj|GAA35819.2| probable ATP-dependent RNA helicase DDX17 [Clonorchis sinensis]
Length = 1557
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 166/402 (41%), Gaps = 49/402 (12%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL----ETSGSSSTIVQIAWIVATAA 241
I N ++ + E P+ W + S +D++ SG +++ + + A A
Sbjct: 107 ILNVIKKNRWESPTPIQAQGWPVAL-----SGRDLVGIAQTGSGKTASFLLPGLVHAKAQ 161
Query: 242 DSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQIT 300
S+ R + GP +L LV ++E A +V V + ++ G + SL+ G + Q+
Sbjct: 162 PSLRRGD-------GPIVLVLVPTRELAQQVEKVVEEFCSYSGFRSASLYGGTSRGGQMD 214
Query: 301 GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP 359
L + PE +++TP RLL + K ++ + LV+D D + IR+ IS +P
Sbjct: 215 QL-ARSPEVVIATPGRLLDFLQSKDTNLRRCTYLVLDEADRMLDMGFEPSIRKIISQVRP 273
Query: 360 HTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGI 418
T+ V A+ L ++++ + S + I Q V + E+ +
Sbjct: 274 DRQTLMWSATWPREVKALAEDFLYDYIQINIGSTKLSANHNIQQHVEIVKESEK--FHRL 331
Query: 419 QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEA 477
L ++GD +V+ + + L KG+ N + H K+ E
Sbjct: 332 LALIKSFGDS------RVIVFTETKRRTDTVCRQLLDKGF------NALAMHGDKHQRER 379
Query: 478 D--------GRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHT 527
D GR S++ +++ L+ + ++ D+ ++Y+ + R
Sbjct: 380 DRALEQFRSGR----TSILVATDVASRGLDINDIRYIVNYDYPSQTEDYIHRIGRTGRSD 435
Query: 528 VSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
G ++FFT A ++I++L + Q VP+ L L S
Sbjct: 436 KKGTAYTFFTAKHPRLARELIDVLREAKQEVPEELEKLAELS 477
>gi|47217820|emb|CAG07234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 737
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 14/330 (4%)
Query: 248 EKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCE 306
+KE + GP + + ++E ++ + CK KA+ + +V+++ G ++ Q L+
Sbjct: 166 QKELEAGEGPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGA 225
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVV 363
E +V TP RL+ V KA + V+ LV D D + +R S +P T++
Sbjct: 226 -EIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLL 284
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
F+ +++L+ I + + A++ + + + SD+ L V
Sbjct: 285 FSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVELLLSGSDKWSWLTRRLVEFT 344
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
+ G VL V K + + L + L +GYS+ + +N V +D +K
Sbjct: 345 SSGS--------VLIFVTKKTNSEELATNLTQEGYSLGLLHGDMDQSERNKVISDFKKSN 396
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
++ D + ++ V+ D + + + R G+ ++ T D++
Sbjct: 397 MPILVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTSKDSS 456
Query: 543 HAGQMIEILEQCGQVVPDALRDLCHTSPML 572
AG ++ LE Q V L DL +P
Sbjct: 457 FAGDLVRNLEGANQAVSKELMDLAMQNPWF 486
>gi|428183253|gb|EKX52111.1| hypothetical protein GUITHDRAFT_65410, partial [Guillardia theta
CCMP2712]
Length = 442
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 134/325 (41%), Gaps = 36/325 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ C K I + ++ GA Q+ LRS +++TP
Sbjct: 137 GPLILVLAPTRELATQIQEECIKFGSCIHIRSCCVYGGAPKGPQLRELRSGA-HIVIATP 195
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLT-- 369
RL + I++ VS LV D D + IR+ I GK T+ +
Sbjct: 196 GRLNDFLEQGMINLQQVSYLVFDEADRMLDMGFEPQIRKILDRIPGKRQTLFYTATWPKE 255
Query: 370 -------YTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLD 422
+ P + + +G + L N+ V +I+ ++ +++ IL+ I +
Sbjct: 256 VRRLASDFLDKPCI--VYIGDTDTLVANKDVTQ----VIKVIDDRFGEKDMILQDI-IRG 308
Query: 423 HAYGDHFHSEPLKVLYIVGK---DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG 479
G +++ K D +NL + C + + D
Sbjct: 309 EGVGSRI------IIFCSTKRMCDQLERNLSRMVPCAAIHGDKDQG-----QRTRILNDF 357
Query: 480 RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ MI D + +++E + VI +F + ++Y+ + R G ++FFTK
Sbjct: 358 KAGQCCVMIATDVAARGLDIKEVKAVINYEFPSNTEDYIHRIGRTGRAGAKGTAYTFFTK 417
Query: 539 DDAAHAGQMIEILEQCGQVVPDALR 563
DA+ A +I+ILE GQ VP LR
Sbjct: 418 KDASKASSLIKILEGAGQEVPPQLR 442
>gi|307191879|gb|EFN75298.1| Probable ATP-dependent RNA helicase DDX5 [Harpegnathos saltator]
Length = 627
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 158/390 (40%), Gaps = 28/390 (7%)
Query: 189 AMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIAR 246
+R G Q P+ W I S +D+ + +GS T+ +I+ I +
Sbjct: 139 GIRRQGYSQPTPIQAQGWPIAL-----SGRDLVAIAQTGSGKTL---GYILPAIVHIIHQ 190
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL-RS 304
+ GP L L ++E A +++ V ++ + + GA Q L R
Sbjct: 191 PRLS--NGDGPIALILAPTRELAQQIQEVANCFGESAAVRNTCIFGGAPKGPQAHDLDRG 248
Query: 305 CEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVV 363
E ++TP RL+ + ++ + LV+D D + IR+ I +P V
Sbjct: 249 VE--ICIATPGRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQV 306
Query: 364 FNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQV 420
T+ V A+ L L++ S + I Q ++VC E+ K+ + +Q
Sbjct: 307 LMWSATWPKEVRALAEDFLTDYTHLNIGSLTLSANHNITQIIDVCQEFEKDSKLFRLLQE 366
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
+ + + K + V K ++ ++ G+ + ++ V + R
Sbjct: 367 IGN-------EKENKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFR 419
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
A ++ D + ++++ + VI D+ S ++Y+ + R +G ++FFT
Sbjct: 420 SGRAPILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSH 479
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+ HAG +IE+L + GQ V L ++ +
Sbjct: 480 NMKHAGDLIEVLREAGQNVNPRLSEMAEMA 509
>gi|326430586|gb|EGD76156.1| DEAD box polypeptide 17 isoform 2 [Salpingoeca sp. ATCC 50818]
Length = 629
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 157/380 (41%), Gaps = 35/380 (9%)
Query: 196 EQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIV-QIAWIVATAADSIARKEKEGF 252
E+ +P+ ++W I +D+ + +GS T+ + +V AA + +
Sbjct: 231 EKPSPIQKHTWSIVL-----RGRDVVGIAATGSGKTLAFGLPGLVHVAARGTPGRGR--- 282
Query: 253 SFTGPFLLFLVSSQEKA---AKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEF 309
PF+L + ++E A KV S ++ + GA Q+ +R
Sbjct: 283 ----PFMLVISPTRELAMQTGKVLSDAGKGMNTPLNVQCIFGGAQRREQMDAMRKPV-HV 337
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFND 366
+V+TP RLL L +ID+S V+ V+D D + I++ ++ P TV+F
Sbjct: 338 IVATPGRLLDLCEAGSIDLSAVTFNVLDEADRMLDMGFERDIKRIMAQMPTPRQTVMF-- 395
Query: 367 CLTYTSVPAVQNLLLGSINR---LSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
+ T V+ + +NR +++ + S + Q V V + K ++LD
Sbjct: 396 --SATWPQEVRRIAKDYLNRPVKVTVGSDDLAASKNVTQIVEVIDPKQ----KNGRLLDL 449
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
H S KVL + L L+ KGY+ + +N V + +
Sbjct: 450 LRKYH-KSRKNKVLVFALYKKEAARLEQFLQYKGYNTKAIHGDLSQGDRNRVLQEFKSGE 508
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
MI D + ++ + E VI F ++++ YV + R G H+ FT+ D
Sbjct: 509 VPLMIATDVAARGLDVPDVEYVINYTFPLTIEEYVHRIGRTGRAGAKGTAHTLFTQHDKH 568
Query: 543 HAGQMIEILEQCGQVVPDAL 562
HAG + +L G VP+AL
Sbjct: 569 HAGGLGNVLRAAGVTVPEAL 588
>gi|367020544|ref|XP_003659557.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
gi|347006824|gb|AEO54312.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
Length = 993
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 150/324 (46%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ + +P KA + V+ + G AI QI L+ E +V+TP
Sbjct: 432 GPIGLIMTPTRELCTQIYTDLQPFAKALKLRAVAAYGGNAIKDQIAELKRGA-EIIVATP 490
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ + +V+D D + G +++ + +P T++F+
Sbjct: 491 GRMIDLLAANSGRVTNLKRATYIVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 547
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + +V +S I Q V + + +K ++ +++L Y
Sbjct: 548 --ATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQVVEIM-DENKKFVRLLELLGELY 604
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
D + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 605 AD---DDDVRALIFVERQEKADDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 658
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
MI + ++++ ++VI D +++YV R +G +F T +
Sbjct: 659 VCPIMIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTPEQE 718
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VP+ L ++
Sbjct: 719 NCAPGIAKALEQSGQPVPEQLNEM 742
>gi|6137207|gb|AAF04377.1|AF188678_1 P72 DEAD box protein [Pisum sativum]
Length = 716
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 166/393 (42%), Gaps = 39/393 (9%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADS 243
I +++ G P+ SW I +KDI + +GS T+ + T++
Sbjct: 163 IHKEVQNAGFSAPTPIQAQSWPIAL-----QSKDIVAIAKTGSGKTLGYLLPAFITSSAL 217
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGL 302
I + GP +L L E A +++ K K I L+ GA Q+ +
Sbjct: 218 IITPK------WGPTILVLHQQGELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLRDI 271
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--- 359
+ +V+TP RL ++ ++ I + VS LV+D D + IR+ ++G P
Sbjct: 272 DRGA-DIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARR 330
Query: 360 HTVVFNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCAS-DEEKILK 416
T++F +LL+ + N ++++ VA++S I Q + V A ++++ L+
Sbjct: 331 QTLMFTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKS--ITQHIEVLAHMEKQRRLE 388
Query: 417 GI-QVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSISTG--SNCIVSHIK 472
I Q D K++ L L + G + G S H+
Sbjct: 389 SILQSQDQGS---------KIIIFCSTKKMCDQLARNLTRQFGAAAIRGDKSQADRDHVL 439
Query: 473 NSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGIL 532
N + GR P + D ++++ VV+ F +++Y+ + R +GI
Sbjct: 440 NQFRS-GRT-PVLVATDV-AARGLDVKDIRVVVNYTFPTGVEDYLHRIGRTGRAGATGIA 496
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++FF DA HA +I+ILE Q VP LR+L
Sbjct: 497 YTFFGDQDAKHASDLIKILEGANQKVPPELREL 529
>gi|345493218|ref|XP_001605403.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Nasonia
vitripennis]
Length = 574
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 153/366 (41%), Gaps = 25/366 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + ++GS T+ I A + + + RK+ GP L L ++
Sbjct: 140 WPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLCRKD-------GPIALVLAPTR 192
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ V + GI L+ GA Q L + E +++TP RLL +
Sbjct: 193 ELAQQIQQVADDFGHSSGIKNTCLYGGAPKGSQARDLDNGV-EIVIATPGRLLDFLESGR 251
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LL 381
++ + LV+D D + IR+ I +P T+ V+NL L
Sbjct: 252 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK--EVKNLAEEFL 309
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ S + I+Q ++VC + EK +K +L + + K + +
Sbjct: 310 KDYAQINVGSLQLSANHNILQIIDVC-QEYEKEIKLSTLLKEIMAEKEN----KTIVFIE 364
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
+ + +K G+ ++ V D R A ++ D + ++E+
Sbjct: 365 TKRRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVED 424
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+ VI D+ ++YV + R +G ++FFT +A A ++++L++ QV+
Sbjct: 425 VKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPSNAGKANDLVQVLKEANQVINP 484
Query: 561 ALRDLC 566
L +L
Sbjct: 485 KLLELA 490
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 175/416 (42%), Gaps = 43/416 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ +A++ G E+ P+ + S +D++
Sbjct: 354 GKGCPK---PIKTWVQCGVSMKILSALKKHGYEKPTPIQAQAI-----PAVMSGRDLIGI 405
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D +E EG P + + ++E A ++ CK K
Sbjct: 406 AKTGSGKTIAFLLPMFRHIMDQRPLEESEG-----PISVIMTPTRELALQITKECKKFSK 460
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 461 PLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLGANSGRVTNLRRVTYMVLD 519
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R S +P TV+F+ + ++ R LN+ +
Sbjct: 520 EADRMFDMGFEPQVMRIVDSVRPDRQTVMFSATFPRA---------MEALARRILNKPIE 570
Query: 395 SQSACIIQSVNVCASDEEKIL---KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
Q +SV VC+ E+ +L + + L + E V+ V K L+
Sbjct: 571 VQVGG--RSV-VCSDVEQHVLVIEEDKKFLKLLELLGHYQERGSVIIFVDKQEHADALLK 627
Query: 452 TLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFII 511
L Y + I + ++S+ D K A ++ ++ L+ ++++V ++
Sbjct: 628 DLMKASYPCMSLHGGIDQYDRDSIIND-FKNGACRLMVATSVAARGLDVKQLILVVNYNC 686
Query: 512 S--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D +AG +I+ LE G VP L L
Sbjct: 687 PNHYEDYVHRAGRTGRAGNKGFAYTFITEDQVRYAGDIIKALELSGSSVPPELEQL 742
>gi|158293649|ref|XP_001688603.1| AGAP004912-PA [Anopheles gambiae str. PEST]
gi|157016549|gb|EDO63983.1| AGAP004912-PA [Anopheles gambiae str. PEST]
Length = 679
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 157/372 (42%), Gaps = 34/372 (9%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFT 255
P F+ + G W S +D+ + +GS T+ I A + + IAR +
Sbjct: 101 PTFIQAVG---WSIAMSGRDMVGIAKTGSGKTLAYILPALVHISNQPRIARGD------- 150
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ VC + GI+ + GA+ Q + LR E +++TP
Sbjct: 151 GPIALVLAPTRELAQQIKQVCDDFGRRMGIYNTCVFGGASKYPQESDLRRGV-EIVIATP 209
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ IS +P V T+
Sbjct: 210 GRLIDFLERETTNLRRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKE 269
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVLDHAYGD 427
+ + L ++++ + + I+Q ++ C E+ K+L+ I +
Sbjct: 270 IRKLAEEFLRDYIQINIGSLNLAANENILQIIDCCEEYEKENRLFKLLEQISSQNDG--- 326
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
K + V K +V+ ++ +G+ ++ V R+ +
Sbjct: 327 -------KTIIFVETKRKVDKIVNVIRRQGWRADGIHGDKSQKDRDYVLNTFRRSTNGIL 379
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D S ++++ + VI DF + ++YV + R T G ++FFT +++ A
Sbjct: 380 VATDVASRGLDVDDVKFVINFDFPNNTEDYVHRIGRTGRSTNKGTSYTFFTPANSSKAPD 439
Query: 547 MIEILEQCGQVV 558
+I +L+ Q +
Sbjct: 440 LITVLQDANQYI 451
>gi|357127458|ref|XP_003565397.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like
[Brachypodium distachyon]
Length = 655
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 35/407 (8%)
Query: 173 DCPSKFLIL---CLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGS 226
+ P+ F+ C I ++ G +P+ SW I +DI+ +GS
Sbjct: 149 ESPAPFMTFQSTCFPPEILREVQQAGFSAPSPIQAQSWPITL-----KGRDIVAVAKTGS 203
Query: 227 SSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIH 285
T+ + I K S GP +L L ++E A +++ K ++ I
Sbjct: 204 GKTLGYLL------PGFILVKNLRNNSRDGPTVLVLSPTRELATQIQDEAVKFGRSSRIS 257
Query: 286 TVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKG 345
+ L+ GA Q+ L + +V+TP RL ++ ++ + + V+ LV+D D +
Sbjct: 258 STCLYGGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRKVSLHQVAYLVLDEADRMLDM 316
Query: 346 DTLSLIRQ---SISGKPHTVVFNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACI 400
IR+ + K T++F +LL + N + +Q VA++S I
Sbjct: 317 GFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLTNPVQVNIGNTDQLVANKS--I 374
Query: 401 IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI 460
Q V V S EK + Q+L EP + I + + +S + Y
Sbjct: 375 TQYVEVI-SPMEKQRRLDQILRS-------QEPGSRIIIFCSTKRMCDQLSRNLSRQYGA 426
Query: 461 STGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEI 519
S ++SV ++ R ++ D + ++++ VV+ DF +++YV
Sbjct: 427 SAIHGDKSQAERDSVLSEFRNGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHR 486
Query: 520 LTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ R +G+ ++FF D+ +A +++ILE Q V LRD+
Sbjct: 487 IGRTGRAGATGLAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMA 533
>gi|328849281|gb|EGF98464.1| hypothetical protein MELLADRAFT_51000 [Melampsora larici-populina
98AG31]
Length = 503
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 24/272 (8%)
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGD--------TLSLIRQSISGKPH 360
+ TP RLL L + + + VS LV+D D L KG L L +S +G
Sbjct: 205 VAGTPGRLLDLANEGHLKLDNVSWLVLDEADRMLDKGFENDIRAIINLCLPSKSTTGSST 264
Query: 361 TVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCA---SDEEKILK 416
+ T+ SV + + + R+ + S S + QSV V E K+ +
Sbjct: 265 RLTAMFSATWPLSVRRLASDFMKDPVRILVGDDQLSASCSVEQSVEVLPDTRGKEFKLFE 324
Query: 417 GIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI---VSHIKN 473
++ L+ + G + + + V + K++ Q L + L KG+ G+ CI +S K
Sbjct: 325 TLKTLEKSGGFNLKKDKVIVFALYKKEA--QRLHAFLLRKGF----GACCIEGDMSQDKR 378
Query: 474 SVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
S + K +++ ++ L+ + EVVI F +++++Y+ + R +G
Sbjct: 379 SQSLEDFKSGRATILVATDVAARGLDIPKVEVVINVTFPLTIEDYIHRIGRTGRAGRTGK 438
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
+FFT +D HAG+++ +L+ QVVP+ L+
Sbjct: 439 SITFFTDEDKVHAGELMRVLKDANQVVPEDLK 470
>gi|389749883|gb|EIM91054.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 487
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 141/321 (43%), Gaps = 25/321 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I +++ GA QI L+ E ++
Sbjct: 134 GPIALVLAPTRELAVQIQQECT---KFGSNSRIRNTAIYGGAPKGPQIRDLQRGV-EIVI 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ ++ + ++ V+ LV+D D + IR+ I +P T++F
Sbjct: 190 ATPGRLIDMLETQKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMF---- 245
Query: 369 TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ T VQ L L + + ++ + + I Q V +C SD EK K I+ LD
Sbjct: 246 SATWPKDVQKLAADFLKDMIQCNIGSMELTANHNIKQIVEIC-SDFEKRGKLIKHLDQ-- 302
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
+E KVL VG ++ L+ G+ ++ V + + +
Sbjct: 303 ---ISAENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSP 359
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+I D S ++++ VI DF + ++Y+ + R + G ++FT D+A A
Sbjct: 360 ILIATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGLKGTSFTYFTTDNAKSA 419
Query: 545 GQMIEILEQCGQVVPDALRDL 565
++ IL++ VP L ++
Sbjct: 420 RDLLAILKEAKAEVPPQLEEM 440
>gi|417405652|gb|JAA49530.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 1033
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 173/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P + S I S +D++
Sbjct: 365 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTP--IQSQAI---PAIMSGRDLIGI 416
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 417 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 471
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 472 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 530
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 531 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 585
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 586 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 637
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 638 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 696
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 697 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPSDLEKL 753
>gi|189211147|ref|XP_001941904.1| ATP-dependent RNA helicase DBP3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977997|gb|EDU44623.1| ATP-dependent RNA helicase DBP3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 601
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 21/297 (7%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ V ++ G D Q+ R +V+TP RL L+ + D+S +V+D D +
Sbjct: 287 GLSVVCVYGGVPKDPQVAACRKAH--IVVATPGRLNDLIGEGSADLSKAEYVVLDEADRM 344
Query: 343 SKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNL---LLGSINRLSL--NQSVA 394
IRQ IS P T++F T T P+V++L + S ++++ NQS
Sbjct: 345 LDKGFEEAIRQIISQTPKKRQTLMF----TATWPPSVRDLASTFMNSPVKITIGDNQSGE 400
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS-KFQNLVSTL 453
++ I+ V K + +Q+L + + V + K++ + +N +
Sbjct: 401 LRANVRIKQVVEVVDPRAKEQRLLQLLKQYQSGKNKDDRILVFCLYKKEAVRIENFI--- 457
Query: 454 KCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFII 511
+ KG+ + G + +S K S K V ++ ++ L+ +VVI F +
Sbjct: 458 RMKGFRVG-GIHGDLSQEKRSASLAAFKEGHVPLLVATDVAARGLDIPAVKVVINVTFPL 516
Query: 512 SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+ ++YV + R G+ + FT D A +G +I +L+ Q VP+ L T
Sbjct: 517 TAEDYVHRIGRTGRAGKEGLAITLFTDHDKALSGSLINVLKAANQPVPEELMKFGTT 573
>gi|195572651|ref|XP_002104309.1| GD18514 [Drosophila simulans]
gi|194200236|gb|EDX13812.1| GD18514 [Drosophila simulans]
Length = 713
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 129/318 (40%), Gaps = 16/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
G +L L ++E A ++ G+ V ++ G + QI+ L E ++ TP
Sbjct: 362 GANVLVLAPTRELALQIEMEVNKYSFRGMKAVCVYGGGDRNMQISDLERGA-EIIICTPG 420
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L+ IDVS ++ LV+D D L G + + + +P +T + P
Sbjct: 421 RLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTI---MTSATWP 477
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPL 434
L S + + V S SV E + + + S+
Sbjct: 478 PGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQVIKLMEDDMAKFNTITSFVKNM--SDTD 535
Query: 435 KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI----KNSVEADGRKRPAVSMIDK 490
K++ G+ + +L S L G+ + CI + + AD + ++
Sbjct: 536 KIIIFCGRKVRADDLSSELTLDGFM----TQCIHGNRDQMDREQAIADIKSGVVRILVAT 591
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D S ++E+ VI DF +++ YV + R G SFFT++D A ++I+
Sbjct: 592 DVASRGLDIEDITHVINYDFPRNIEEYVHRVGRTGRAGRQGTSISFFTREDWGMAKELID 651
Query: 550 ILEQCGQVVPDALRDLCH 567
IL++ Q VPD L ++
Sbjct: 652 ILQEAEQEVPDELHNMAR 669
>gi|384485449|gb|EIE77629.1| hypothetical protein RO3G_02333 [Rhizopus delemar RA 99-880]
Length = 1089
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 31/328 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP + + ++E A ++ CKP LK + V + G+ I QI L R CE +V T
Sbjct: 526 GPMAIIMTPTRELATQIHKECKPFLKVLNLRAVCAYGGSPIKDQIADLKRGCE--IIVCT 583
Query: 314 PERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDC 367
P R++ L+ S + ++ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 584 PGRMIDLLCANSGRVTNLRRVTYMVMDEADRMFDMGFEPQVMKIVNNVRPNRQTVLFS-- 641
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAY 425
+ P L + + L +V +S + EE K ++ +++L +
Sbjct: 642 ---ATFPRQMEALARKVLKKPLEITVGGRSVVCDDVDQIVEVREENTKFVRLLEILGKLF 698
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPA 484
D +++ V + NL+ L +GY C H K+ + D
Sbjct: 699 HDEGEDNASAIIF-VDRHEAADNLLRDLMRRGYP------CQSLHGGKDQADRDSTIYDF 751
Query: 485 VSMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
S I I+T+ +++ +VVI + M++YV + R G ++F T
Sbjct: 752 KSGITNILIATSVAARGLDVKNLKVVINYECPNHMEDYVHRVGRTGRAGNKGTAYTFITP 811
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
D +A + + L+ GQ +P L+ L
Sbjct: 812 DQDRYAMDICKALKMSGQEIPPDLQTLA 839
>gi|296423641|ref|XP_002841362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637599|emb|CAZ85553.1| unnamed protein product [Tuber melanosporum]
Length = 568
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 32/318 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + G+ I QI L+ E +V TP
Sbjct: 39 GPISLIMTPTRELAVQIFKECKPFLKALNLRAVCAYGGSPIKDQIADLKRGA-EIIVCTP 97
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
R++ L+ S + ++ V+ +V+D D + + + IS +P TV+F+
Sbjct: 98 GRMIDLLAANSGRVTNLKRVTYIVLDEADRMFDMGFEPQVMKIISNVRPDRQTVLFSATF 157
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L + + +SV + + Q V V A D+ K + +++L Y
Sbjct: 158 PRNMEALARKVLQRPVEIVVGARSVVAPE--VTQIVEVRA-DDAKFHRLLELLGELYD-- 212
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+ + L V + +L+ L +GY C+ H G K I
Sbjct: 213 -KDDDARTLIFVDRQESADSLLRDLMRRGYP------CMSIH--------GGK----DQI 253
Query: 489 DKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D+D + ++V+ D M++YV + R +G +F T++ +A +
Sbjct: 254 DRDSTISDFKNGLKLVVNYDCPNHMEDYVHRVGRTGRAGNTGTAVTFITEEQDRYAVDIA 313
Query: 549 EILEQCGQVVPDALRDLC 566
+ L Q GQ VP+ ++ L
Sbjct: 314 KALRQSGQKVPEPVQRLV 331
>gi|194898941|ref|XP_001979021.1| GG10666 [Drosophila erecta]
gi|190650724|gb|EDV47979.1| GG10666 [Drosophila erecta]
Length = 720
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 354 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 408
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 409 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 468
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 469 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 525
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 526 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 577
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 578 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 637
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 638 NAKQAKALVDVLREANQEINPALENLARNS 667
>gi|432117756|gb|ELK37909.1| Putative ATP-dependent RNA helicase DDX46 [Myotis davidii]
Length = 1191
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 601 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQAQAI-----PAIMSGRDLIGI 652
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 653 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 707
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 708 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 766
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 767 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 821
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 822 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 873
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 874 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 932
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 933 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 989
>gi|302774092|ref|XP_002970463.1| hypothetical protein SELMODRAFT_441099 [Selaginella moellendorffii]
gi|300161979|gb|EFJ28593.1| hypothetical protein SELMODRAFT_441099 [Selaginella moellendorffii]
Length = 1198
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 36/328 (10%)
Query: 255 TGPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVS 312
+GP +L L ++E A ++ K ++ I + ++ GA+ Q+ + R C+ +++
Sbjct: 251 SGPTVLVLAPTRELATQIHEEAVKFGRSSRITSTCVYGGASKGPQLRDIERGCD--IVIA 308
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS 372
TP RL + ++ I + VS LV+D D + IR+ ++ P V L YT+
Sbjct: 309 TPGRLNDFLEMRRISLRQVSYLVLDEADRMLDMGFEPQIRKIVNEVP---VQRQTLMYTA 365
Query: 373 VPAVQ------NLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ +LL+ I N + + I Q V V S ++K K +L
Sbjct: 366 TWPKEVRKIAGDLLMNPIQVNIGNTDDLAANKAITQCVEVV-SPQDKARKLELILRT--- 421
Query: 427 DHFHSEP-LKVLYIVGKDSKFQNLVSTLK-------CKGYSISTGSNCIVSHIKNSVEAD 478
EP K++ L +L+ G + ++S K
Sbjct: 422 ----QEPGSKIIIFCSTKRMCDQLARSLRRDFGAVAIHGDKSQGERDWVLSQFKAG---- 473
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
K P + D ++++ VVI DF +++YV + R +G+ H+FF +
Sbjct: 474 --KSPVLVATDV-AARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGLAHTFFAE 530
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
D +A +I++LE Q VP LR++
Sbjct: 531 QDGKYARDLIKVLEGANQKVPPELREMA 558
>gi|418068830|ref|ZP_12706111.1| superfamily II DNA/RNA helicase [Pediococcus acidilactici MA18/5M]
gi|357538488|gb|EHJ22509.1| superfamily II DNA/RNA helicase [Pediococcus acidilactici MA18/5M]
Length = 438
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP LL L SQE A + V + + + T S+ GA + QI L+ +PE +V TP
Sbjct: 61 GPQLLVLAPSQELAIQTTDVFREWASLINLKTTSITGGANVQRQIERLKKKKPEIIVGTP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ 353
R+L L++ + + V + LV+D D + G+ L +RQ
Sbjct: 121 GRVLTLINERRLKVKEIQSLVIDEADEILTGEALEDVRQ 159
>gi|195502160|ref|XP_002098101.1| GE24123 [Drosophila yakuba]
gi|194184202|gb|EDW97813.1| GE24123 [Drosophila yakuba]
Length = 719
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 356 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 410
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 411 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 470
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 471 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 527
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 528 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 579
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 580 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 639
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 640 NAKQAKALVDVLREANQEINPALENLARNS 669
>gi|427442162|ref|ZP_18925552.1| II DNA/RNA helicase [Pediococcus lolii NGRI 0510Q]
gi|425786807|dbj|GAC46340.1| II DNA/RNA helicase [Pediococcus lolii NGRI 0510Q]
Length = 438
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP LL L SQE A + V + + + T S+ GA + QI L+ +PE +V TP
Sbjct: 61 GPQLLVLAPSQELAIQTTDVFREWASLINLKTTSITGGANVQRQIERLKKKKPEIIVGTP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ 353
R+L L++ + + V + LV+D D + G+ L +RQ
Sbjct: 121 GRVLTLINERRLKVKEIQSLVIDEADEILTGEALEDVRQ 159
>gi|40788370|dbj|BAA34521.2| KIAA0801 protein [Homo sapiens]
Length = 1058
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 390 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 441
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 442 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 496
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 497 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 555
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 556 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 610
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 611 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 662
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 663 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 721
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 722 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 778
>gi|160380616|sp|A6ZUA1.1|DBP3_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP3; AltName: Full=DEAD
box protein 3; AltName: Full=Helicase CA3
gi|151943729|gb|EDN62039.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 157/371 (42%), Gaps = 53/371 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF- 282
+ I +AW + + + G F+F P + L++ Q+K V P +
Sbjct: 136 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELA 195
Query: 283 --------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
G+ ++ G D Q L+ + +V+TP RLL L+ ++D+
Sbjct: 196 SQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQ--VVVATPGRLLDLLQEGSVDL 253
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPA 375
S V+ LV+D D L KG D ++IR++ + K T++F T+ + P
Sbjct: 254 SQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI 313
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 314 --KVSIGNTDQLTANKRITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 358
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GY+I+ + + + + + ++ D
Sbjct: 359 NEKVLIFALYKKEAARVERNLKYNGYNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 418
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 419 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 478
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 479 NGANQPVPEDL 489
>gi|396499198|ref|XP_003845415.1| hypothetical protein LEMA_P007230.1 [Leptosphaeria maculans JN3]
gi|312221996|emb|CBY01936.1| hypothetical protein LEMA_P007230.1 [Leptosphaeria maculans JN3]
Length = 602
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 27/300 (9%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ V ++ G D Q+ R +V+TP RL L+ + D+S +V+D D +
Sbjct: 288 GLEVVCVYGGVPKDPQVAACRKAH--IVVATPGRLNDLIGDGSADLSKAEYVVLDEADRM 345
Query: 343 SKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQ 396
IRQ +S P T++F T T P+V+ L + S ++++ +V+ +
Sbjct: 346 LDKGFEEPIRQIVSQTPKKRQTLMF----TATWPPSVRELASTFMNSPVKITIGDNVSGE 401
Query: 397 ---SACIIQSVNVCA--SDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS-KFQNLV 450
+ I Q V V + E+++ IQ+L + + V + K++ + +N +
Sbjct: 402 LRANVRIKQVVEVIDPHAKEQRL---IQLLKQYQSGKNKDDRILVFCLYKKEAVRIENFI 458
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPD 508
+ KG+ + G + ++ K S K V ++ ++ L+ +VVI
Sbjct: 459 ---RMKGFRVG-GIHGDLTQEKRSASLAAFKEGHVPLLVATDVAARGLDIPAVKVVINVT 514
Query: 509 FIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
F ++ ++YV + R G+ +FFT+ D +G +I +L+ Q+VP+ L T
Sbjct: 515 FPLTAEDYVHRIGRTGRAGKEGLAITFFTEHDKGLSGSLINVLKAANQLVPEELMKFGTT 574
>gi|24644479|ref|NP_524243.2| Rm62, isoform A [Drosophila melanogaster]
gi|30923187|sp|P19109.3|DDX17_DROME RecName: Full=ATP-dependent RNA helicase p62
gi|23175945|gb|AAG22213.2| Rm62, isoform A [Drosophila melanogaster]
gi|41058179|gb|AAR99134.1| RE11923p [Drosophila melanogaster]
Length = 719
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 354 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 408
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 409 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 468
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 469 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 525
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 526 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 577
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 578 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 637
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 638 NAKQAKALVDVLREANQEINPALENLARNS 667
>gi|158293651|ref|XP_315003.3| AGAP004912-PB [Anopheles gambiae str. PEST]
gi|157016550|gb|EAA10492.4| AGAP004912-PB [Anopheles gambiae str. PEST]
Length = 705
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 157/372 (42%), Gaps = 34/372 (9%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFT 255
P F+ + G W S +D+ + +GS T+ I A + + IAR +
Sbjct: 127 PTFIQAVG---WSIAMSGRDMVGIAKTGSGKTLAYILPALVHISNQPRIARGD------- 176
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ VC + GI+ + GA+ Q + LR E +++TP
Sbjct: 177 GPIALVLAPTRELAQQIKQVCDDFGRRMGIYNTCVFGGASKYPQESDLRRGV-EIVIATP 235
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ IS +P V T+
Sbjct: 236 GRLIDFLERETTNLRRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKE 295
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE-----KILKGIQVLDHAYGD 427
+ + L ++++ + + I+Q ++ C E+ K+L+ I +
Sbjct: 296 IRKLAEEFLRDYIQINIGSLNLAANENILQIIDCCEEYEKENRLFKLLEQISSQNDG--- 352
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
K + V K +V+ ++ +G+ ++ V R+ +
Sbjct: 353 -------KTIIFVETKRKVDKIVNVIRRQGWRADGIHGDKSQKDRDYVLNTFRRSTNGIL 405
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D S ++++ + VI DF + ++YV + R T G ++FFT +++ A
Sbjct: 406 VATDVASRGLDVDDVKFVINFDFPNNTEDYVHRIGRTGRSTNKGTSYTFFTPANSSKAPD 465
Query: 547 MIEILEQCGQVV 558
+I +L+ Q +
Sbjct: 466 LITVLQDANQYI 477
>gi|350424793|ref|XP_003493914.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
impatiens]
Length = 566
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 156/368 (42%), Gaps = 25/368 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + ++GS T+ I A + + + RK+ GP L L ++
Sbjct: 138 WPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLGRKD-------GPIALVLAPTR 190
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ V + GI L+ GA Q L E +++TP RLL +
Sbjct: 191 ELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGV-EIVIATPGRLLDFLESGR 249
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LL 381
++ + LV+D D + IR+ I +P T+ V+NL L
Sbjct: 250 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK--EVKNLAEDFL 307
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ + + I+Q ++VC D EK K +L + SE +++I
Sbjct: 308 KDYAQINVGSLQLAANHNILQIIDVC-QDYEKENKLSTLLKEIMAE---SENKTIVFIET 363
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
K + + +K G+ ++ V D R A ++ D + ++E+
Sbjct: 364 K-RRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVED 422
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+ VI D+ ++YV + R +G ++FFT +++ A +I++L++ QV+
Sbjct: 423 VKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVINP 482
Query: 561 ALRDLCHT 568
L +L +
Sbjct: 483 KLLELADS 490
>gi|195343855|ref|XP_002038506.1| GM10578 [Drosophila sechellia]
gi|194133527|gb|EDW55043.1| GM10578 [Drosophila sechellia]
Length = 724
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 358 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 412
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 413 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 472
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 473 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 529
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 530 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 581
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 582 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 641
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 642 NAKQAKALVDVLREANQEINPALENLARNS 671
>gi|327282752|ref|XP_003226106.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Anolis
carolinensis]
Length = 697
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 21/322 (6%)
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCE 306
+EK G GP +L L+ ++E A +V + C GI ++ ++ G QI + S
Sbjct: 360 REKRG----GPGMLVLIPTRELALQVEAECSKYSYKGIKSICIYGGGDRRGQIN-VVSKG 414
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFN 365
+ +++TP RL L I++ ++ LV+D D L G +++ + +P
Sbjct: 415 VDIVIATPGRLNDLQMNNFINLRSITYLVLDEADRMLDMGFEPQIMKILLDIRPDR---Q 471
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEKILKGIQVLD 422
+T + P L S + + V + + +V V +EEK +
Sbjct: 472 TVMTSATWPDGVRRLAKSYLKDPMIVYVGTLDLAAVNTVEQRVVVIPEEEK-----RAFT 526
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRK 481
+ D SE KV+ VGK +L S +G + S SN + ++E D R+
Sbjct: 527 RFFIDSMKSED-KVIIFVGKKLTADDLSSDFSLQGIPVQSLHSNREQCDREQALE-DFRQ 584
Query: 482 RPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
++ D S ++++ V DF +++ YV + R +G + T++D
Sbjct: 585 GRVRVLVATDLASRGLDVQDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGEAVTLVTRND 644
Query: 541 AAHAGQMIEILEQCGQVVPDAL 562
A ++IEILE+ QVVP+ L
Sbjct: 645 WRVASELIEILERGNQVVPEEL 666
>gi|270290583|ref|ZP_06196807.1| II DNA/RNA helicase [Pediococcus acidilactici 7_4]
gi|304386073|ref|ZP_07368413.1| DEAD/DEAH box family ATP-dependent RNA helicase [Pediococcus
acidilactici DSM 20284]
gi|270280643|gb|EFA26477.1| II DNA/RNA helicase [Pediococcus acidilactici 7_4]
gi|304327800|gb|EFL95026.1| DEAD/DEAH box family ATP-dependent RNA helicase [Pediococcus
acidilactici DSM 20284]
Length = 438
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP LL L SQE A + V + + + T S+ GA + QI L+ +PE +V TP
Sbjct: 61 GPQLLVLAPSQELAIQTTDVFREWASLINLKTTSITGGANVQRQIERLKKKKPEIIVGTP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ 353
R+L L++ + + V + LV+D D + G+ L +RQ
Sbjct: 121 GRVLTLINERRLKVKEIQSLVIDEADEILTGEALEDVRQ 159
>gi|307110010|gb|EFN58247.1| hypothetical protein CHLNCDRAFT_30080, partial [Chlorella
variabilis]
Length = 551
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 22/323 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP +L L ++E A ++++ C FG I + ++ GA Q LR E ++
Sbjct: 201 GPIVLCLAPTRELAVQIQNECA---RFGSTSRIKSTCVYGGAPKGPQANDLRRGV-EIVI 256
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ + + ++ V+ LV+D D + IR+ + +P T+
Sbjct: 257 ATPGRLIDFLESRTTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLLWSATW 316
Query: 371 TSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+Q L L + ++ + + I Q + A + EK K ++VL+
Sbjct: 317 PK--EIQTLAREFLNNPYQVLIGSPDLKANHRITQIFDFPA-EHEKYQKLVRVLEKEMDG 373
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
++L + + L+ G+ + H ++ V A+ + M
Sbjct: 374 R------RILIFLETKKGCDAVTRQLRMDGWPALSIHGDKSQHERDWVLAEFKAGKHPIM 427
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D + ++++ ++VI D ++YV + R SG +SFFT + A Q
Sbjct: 428 IATDVAARGLDVKDIKMVINYDMPSCAEDYVHRIGRTGRAGASGAAYSFFTAANGRMARQ 487
Query: 547 MIEILEQCGQVVPDALRDLCHTS 569
+++ILE+ Q VP LR TS
Sbjct: 488 LVQILEEASQAVPPELRQFAMTS 510
>gi|24644481|ref|NP_731031.1| Rm62, isoform D [Drosophila melanogaster]
gi|281361218|ref|NP_001163528.1| Rm62, isoform H [Drosophila melanogaster]
gi|23175946|gb|AAN14331.1| Rm62, isoform D [Drosophila melanogaster]
gi|51092049|gb|AAT94438.1| RE56857p [Drosophila melanogaster]
gi|272476832|gb|ACZ94826.1| Rm62, isoform H [Drosophila melanogaster]
Length = 575
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 210 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 264
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 265 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 325 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 381
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 382 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 433
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 434 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 493
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 494 NAKQAKALVDVLREANQEINPALENLARNS 523
>gi|24644483|ref|NP_731032.1| Rm62, isoform E [Drosophila melanogaster]
gi|320542448|ref|NP_001189182.1| Rm62, isoform I [Drosophila melanogaster]
gi|10727150|gb|AAF51927.2| Rm62, isoform E [Drosophila melanogaster]
gi|257286223|gb|ACV53058.1| LP18603p [Drosophila melanogaster]
gi|318068719|gb|ADV37273.1| Rm62, isoform I [Drosophila melanogaster]
Length = 578
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 213 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 267
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 268 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 327
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 328 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 384
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 385 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 436
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 437 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 496
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 497 NAKQAKALVDVLREANQEINPALENLARNS 526
>gi|307183175|gb|EFN70084.1| Probable ATP-dependent RNA helicase DDX17 [Camponotus floridanus]
Length = 705
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 159/367 (43%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 140 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINHQPRLNRG---DGPIVLILAPTREL 194
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A ++++V + FG I + G+ Q L E ++TP RL+ +
Sbjct: 195 AQQIQTVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKG 250
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 251 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLT 310
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
++++ + + I Q + +C + EK K Q+L G S K++ V
Sbjct: 311 DYIQINIGSLSLAANHNIRQIIEIC-QEHEKEYKLSQLL-REIGTERGS---KMIIFVET 365
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
K ++ T+K G+S + ++ V ++ R + ++ D + ++E+
Sbjct: 366 KKKVDDITKTIKRDGWSAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVEDV 425
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+ VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ +
Sbjct: 426 KYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELIAVLEEAGQTINPQ 485
Query: 562 LRDLCHT 568
L D+ ++
Sbjct: 486 LADIANS 492
>gi|365760745|gb|EHN02442.1| Dbp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840222|gb|EJT43125.1| DBP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 516
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 155/371 (41%), Gaps = 49/371 (13%)
Query: 226 SSSTIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKA 281
+ + I +AW + + + G F+F P + L++ Q K V P +
Sbjct: 127 TPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQGKRGIQVLVISPTRE 186
Query: 282 F---------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
G+ ++ G D Q L+ + +V+TP RLL L+ ++
Sbjct: 187 LASQIYDNLIILTDKVGMQCCCVYGGVPKDEQRNQLKRSQ--VVVATPGRLLDLLQEGSV 244
Query: 327 DVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDC-------LTYTSVPA 375
D+S V+ LV+D D L KG D ++IR++ + K T++F L T +
Sbjct: 245 DLSQVNYLVLDEADRMLEKGFEEDIRNIIRETDASKRQTLMFTATWPKEVRELASTFMKN 304
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 305 PIKVSIGNTDQLTANKKITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 351
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GY ++ + + + + + ++ D
Sbjct: 352 NEKVLIFALYKKEATRVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 411
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 412 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 471
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 472 NGANQPVPEDL 482
>gi|291387348|ref|XP_002710262.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Oryctolagus
cuniculus]
Length = 1030
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 363 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 414
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 415 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 469
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 470 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 528
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 529 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 583
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 584 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 635
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 636 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 694
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 695 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTTVPSDLEKL 751
>gi|328780921|ref|XP_394723.3| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
mellifera]
Length = 726
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 157/367 (42%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 137 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINHQPRLSRG---DGPIVLILAPTREL 191
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A +++SV + FG I + G+ Q L E ++TP RL+ +
Sbjct: 192 AQQIQSVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKG 247
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 248 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLS 307
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
++++ + + I Q V +C + EK +K +L D K++ V
Sbjct: 308 DYIQINIGSLTLAANHNIRQIVEIC-QEHEKEMKLSNLLREIGKDRGS----KMIIFVET 362
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
K ++ +K +G+ + ++ V ++ R + ++ D + ++E+
Sbjct: 363 KKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVEDV 422
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+ VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ +
Sbjct: 423 KYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQAINPQ 482
Query: 562 LRDLCHT 568
L DL ++
Sbjct: 483 LADLANS 489
>gi|402872563|ref|XP_003900179.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Papio anubis]
Length = 984
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|119582644|gb|EAW62240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_c [Homo
sapiens]
Length = 1032
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|68465332|ref|XP_723365.1| hypothetical protein CaO19.12334 [Candida albicans SC5314]
gi|46445394|gb|EAL04663.1| hypothetical protein CaO19.12334 [Candida albicans SC5314]
Length = 564
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 135/293 (46%), Gaps = 26/293 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G++ V+++ G + D QI L++ +V+TP RL+ L++ AI++ V+ LV+D D
Sbjct: 251 GVNCVAVYGGVSKDDQIRKLKTAN--VVVATPGRLVDLINDGAINLGKVNYLVLDEADRM 308
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL-------LGSINRLSLNQ 391
L KG D ++I + + + T++F N + +G + LS N+
Sbjct: 309 LEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANK 368
Query: 392 SVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD-SKFQNLV 450
+ +++ +N D+EK L IQ+L + + + + K+ S+ +N
Sbjct: 369 RITQ----VVEVINKF--DKEKKL--IQLLRKYNANESSDNKILIFALYKKEASRIENF- 419
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDF 509
LK +S++ + + + + + + ++ D + ++ +VVI F
Sbjct: 420 --LKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTF 477
Query: 510 IISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++++YV + R G H+ FT+D+ +G + IL Q VP+ L
Sbjct: 478 PLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPEEL 530
>gi|449299906|gb|EMC95919.1| hypothetical protein BAUCODRAFT_508764 [Baudoinia compniacensis
UAMH 10762]
Length = 567
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLT 369
+V+TP RL + +ID+S V +V+D D + +R+ IS P T T
Sbjct: 276 VVATPGRLNDFIQEGSIDLSSVQYVVLDEADRMLDTGFEQEVRKIISTTPATGRQTLMFT 335
Query: 370 YTSVPAVQNL---LLGSINRLSLNQSVASQ---SACIIQSVNVCASDEEKILKGIQVLDH 423
T P+V+ L + ++++ + + + + I+Q V V ++K + IQ+L
Sbjct: 336 ATWPPSVRELADTFMSKPVKVTIGDNASGELRANTRIVQEVEVMTEQQDKQPRLIQLLKQ 395
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
+ + V + K++ + ++ +G++++ G + ++ K + + K
Sbjct: 396 YQSGKNKQDRILVFCLYKKEA--TRIEEFIRRRGFNVA-GIHGDLNQHKRTESLEAFKAG 452
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ ++VI F +++++YV + R G +FFT +
Sbjct: 453 TVPILVATDVAARGLDIPAVKLVINVTFPLTVEDYVHRIGRTGRAGQDGKAITFFTDAEK 512
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
AG +I +L+ GQ VP+ L
Sbjct: 513 GLAGALINVLKAAGQPVPEEL 533
>gi|15218071|ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 1166
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 144/328 (43%), Gaps = 36/328 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S + K GI V ++ G+ + QI+ L+ E +V TP
Sbjct: 602 GPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGT-EIVVCTP 660
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ S K ++ V+ LV+D D + ++ I Q+I + TV+F+
Sbjct: 661 GRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATF 720
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L + +SV ++ I Q V V + ++ L+ +++L
Sbjct: 721 PRQVETLARKVLNKPVEIQVGGRSVVNKD--ITQLVEV-RPESDRFLRLLELLGE----- 772
Query: 429 FHSEPLKVLYIVGK----DSKFQNLVST----LKCKGYSISTGSNCIVSHIKNSVEADGR 480
SE K+L V D+ +++++ + L G T +S KN V
Sbjct: 773 -WSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDV----- 826
Query: 481 KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+++ ++ L+ E E+V+ D ++YV + R G +F ++
Sbjct: 827 ----CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 882
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
DDA +A +++ LE Q VPD L+ L
Sbjct: 883 DDAKYAPDLVKALELSEQPVPDDLKALA 910
>gi|344264944|ref|XP_003404549.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Loxodonta
africana]
Length = 1031
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|307173398|gb|EFN64357.1| Probable ATP-dependent RNA helicase DDX5 [Camponotus floridanus]
Length = 639
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 171/429 (39%), Gaps = 42/429 (9%)
Query: 149 ERAEVHLNGKSCANGHHGQACEKLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGI 208
E AE+ + G++ N Q E+ + P + +R G Q P+ W I
Sbjct: 122 ENAEITVKGENVPNPI--QYFEEGNFPPYVM--------EGIRRQGYSQPTPIQAQGWPI 171
Query: 209 EFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
S +D+ + +GS T+ +I+ I + + GP +L L ++
Sbjct: 172 AL-----SGRDLVAIAQTGSGKTL---GYILPAIVHIIHQPRLS--NGDGPIVLVLAPTR 221
Query: 267 EKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVS 322
E A +++ V FG + + GA Q L E ++TP RL+ +
Sbjct: 222 ELAQQIQEVAN---CFGETAAVRNTCIFGGAPKGPQAHDLERG-IEICIATPGRLIDFLE 277
Query: 323 LKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLL 380
++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 278 RGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRALAEDF 337
Query: 381 LGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGDHFHSEPLKVLY 438
L L++ S + I Q ++VC E+ K+ + +Q + + K +
Sbjct: 338 LTDYVHLNIGSLTLSANHNITQIIDVCHEYEKDSKLYRLLQEIGT-------EKENKTII 390
Query: 439 IVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-E 497
V K ++ ++ G+ + ++ V + R A ++ D + +
Sbjct: 391 FVETKRKVDDITRNIRRDGWQAVSIHGDKNQQERDHVLQEFRSGRAPILVATDVAARGLD 450
Query: 498 LEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQV 557
+++ + VI D+ S ++Y+ + R +G ++FFT + HAG +IE+L + GQ
Sbjct: 451 VDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVLREAGQN 510
Query: 558 VPDALRDLC 566
V L ++
Sbjct: 511 VNPRLSEMA 519
>gi|23336902|tpg|DAA00076.1| TPA_exp: Prp5-like DEAD-box protein [Homo sapiens]
gi|410212896|gb|JAA03667.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212898|gb|JAA03668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212900|gb|JAA03669.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256700|gb|JAA16317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256702|gb|JAA16318.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410300506|gb|JAA28853.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410350251|gb|JAA41729.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
Length = 1032
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|383863318|ref|XP_003707128.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Megachile rotundata]
Length = 566
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 25/366 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + ++GS T+ I A + + + RK+ GP L L ++
Sbjct: 138 WPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLGRKD-------GPIALVLAPTR 190
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ V GI L+ GA Q L E +++TP RLL +
Sbjct: 191 ELAQQIQQVADDFGHTSGIRNTCLYGGAPKGAQARDLDGGV-EIVIATPGRLLDFLESGR 249
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LL 381
++ + LV+D D + IR+ I +P T+ V+NL L
Sbjct: 250 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK--EVKNLAEDFL 307
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ + + I+Q ++VC D EK K +L + SE +++I
Sbjct: 308 KDYAQINVGSLQLAANHNILQIIDVC-QDYEKENKLSTLLKEIMAE---SENKTIVFIET 363
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
K + + +K G+ ++ V D R A ++ D + ++E+
Sbjct: 364 K-RRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVED 422
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+ VI D+ ++YV + R +G ++FFT +++ A +I++L++ QV+
Sbjct: 423 VKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVINP 482
Query: 561 ALRDLC 566
L +L
Sbjct: 483 KLLELA 488
>gi|66555009|ref|XP_395774.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Apis
mellifera]
Length = 566
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 156/368 (42%), Gaps = 25/368 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + ++GS T+ I A + + + RK+ GP L L ++
Sbjct: 138 WPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLGRKD-------GPIALVLAPTR 190
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ V + GI L+ GA Q L E +++TP RLL +
Sbjct: 191 ELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGV-EIVIATPGRLLDFLESGR 249
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LL 381
++ + LV+D D + IR+ I +P T+ V+NL L
Sbjct: 250 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK--EVKNLAEDFL 307
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ + + I+Q ++VC D EK K +L + SE +++I
Sbjct: 308 KDYAQINVGSLQLAANHNILQIIDVC-QDYEKENKLSTLLKEIMAE---SENKTIVFIET 363
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
K + + +K G+ ++ V D R A ++ D + ++E+
Sbjct: 364 K-RRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVED 422
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+ VI D+ ++YV + R +G ++FFT +++ A +I++L++ QV+
Sbjct: 423 VKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVINP 482
Query: 561 ALRDLCHT 568
L +L +
Sbjct: 483 KLLELADS 490
>gi|115533224|ref|NP_001041134.1| Protein F58E10.3, isoform a [Caenorhabditis elegans]
gi|3877954|emb|CAB04518.1| Protein F58E10.3, isoform a [Caenorhabditis elegans]
Length = 561
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 159/373 (42%), Gaps = 33/373 (8%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +DI+ +GS T+ + + R+ EG P +L L+ ++E
Sbjct: 160 WPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEG-----PAVLVLLPTREL 214
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +V+ V + G+ L GA+ Q L + +V+TP RLL + +
Sbjct: 215 AQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGV-DIVVATPGRLLDFLDNGTTN 273
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYTSVPAVQNLLLGSI 384
+ S LV+D D + I++ I +P T++F+ V A+ +
Sbjct: 274 MKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWP-KEVRALASDFQKDA 332
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
L++ + + I Q V++ + K K +++L+H + + K + V
Sbjct: 333 AFLNVGSLELAANHNITQVVDIL-EEHAKQAKLMELLNHI----MNQKECKTIIFVETKR 387
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD-------GRKRPAVSMIDKDHISTA- 496
K L ++ G+ + CI KN E D K P M+ D +
Sbjct: 388 KADELTRAMRRDGWP----TLCIHGD-KNQGERDWVLQEFKAGKTPI--MLATDVAARGL 440
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++++ + VI D+ + ++YV + R G ++FFT +A+ A ++++L++ Q
Sbjct: 441 DVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
Query: 557 VVPDALRDLCHTS 569
VP ALRD+ + S
Sbjct: 501 TVPQALRDMANRS 513
>gi|390459218|ref|XP_002744211.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Callithrix
jacchus]
Length = 1031
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|119895518|ref|XP_586902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|297477226|ref|XP_002689237.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|296485325|tpg|DAA27440.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Bos taurus]
Length = 1031
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|41327773|ref|NP_055644.2| probable ATP-dependent RNA helicase DDX46 [Homo sapiens]
gi|332821955|ref|XP_517939.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan
troglodytes]
gi|397518269|ref|XP_003829316.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan paniscus]
gi|116241326|sp|Q7L014.2|DDX46_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=PRP5 homolog
gi|15126766|gb|AAH12304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
gi|119582645|gb|EAW62241.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_d [Homo
sapiens]
Length = 1031
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|73971268|ref|XP_531911.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Canis lupus
familiaris]
gi|194219918|ref|XP_001918233.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Equus
caballus]
gi|426229554|ref|XP_004008855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Ovis aries]
Length = 1031
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|24644485|ref|NP_731033.1| Rm62, isoform C [Drosophila melanogaster]
gi|24644487|ref|NP_731034.1| Rm62, isoform F [Drosophila melanogaster]
gi|45551833|ref|NP_731035.2| Rm62, isoform B [Drosophila melanogaster]
gi|10727151|gb|AAG22212.1| Rm62, isoform F [Drosophila melanogaster]
gi|23175947|gb|AAN14332.1| Rm62, isoform C [Drosophila melanogaster]
gi|25012758|gb|AAN71471.1| RE68337p [Drosophila melanogaster]
gi|45446365|gb|AAF51926.2| Rm62, isoform B [Drosophila melanogaster]
gi|220950572|gb|ACL87829.1| Rm62-PB [synthetic construct]
Length = 578
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 141/332 (42%), Gaps = 36/332 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 213 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 267
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 268 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 327
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 328 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 384
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 385 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 436
Query: 486 SMIDKDHISTA--------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
S K +I A +++ + VI D+ + ++Y+ + R G +FFT
Sbjct: 437 S--GKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFT 494
Query: 538 KDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
K++A A ++++L + Q + AL +L S
Sbjct: 495 KNNAKQAKALVDVLREANQEINPALENLARNS 526
>gi|301754307|ref|XP_002912967.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Ailuropoda melanoleuca]
Length = 1031
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|195061826|ref|XP_001996076.1| GH14289 [Drosophila grimshawi]
gi|193891868|gb|EDV90734.1| GH14289 [Drosophila grimshawi]
Length = 746
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 164/399 (41%), Gaps = 46/399 (11%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI-LETSGSSSTIVQI--AWIVATAADSIAR 246
+R G + P+ W I S A + + +GS T+ I A + + R
Sbjct: 314 IRRQGYKSPTPIQAQGWPIAM----SGANFVGIAKTGSGKTLGYILPAIVHINNQQPLQR 369
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL 302
E GP L L ++E A +++ V FG + + GA Q+ L
Sbjct: 370 GE-------GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDL 419
Query: 303 -RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPH 360
R CE +++TP RL+ +S + ++ + LV+D D + IR+ +S +P
Sbjct: 420 QRGCE--IVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 477
Query: 361 TVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKG 417
T+ V + LG+ ++++ S + I Q V+VC S E+K+
Sbjct: 478 RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEDKLKS- 536
Query: 418 IQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVE 476
+L Y P K++ V + NLV ++ S G C H K+ E
Sbjct: 537 --LLSDIYDTS--ENPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSE 586
Query: 477 ADGRKRPAVSMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530
D R S ++T +++ + VI D+ + ++Y+ + R G
Sbjct: 587 RDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKG 646
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+FFTK++A A ++++L++ Q + AL +L S
Sbjct: 647 TSFAFFTKNNAKQAKSLVDVLKEANQEINPALENLARNS 685
>gi|145352838|ref|XP_001420742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580977|gb|ABO99035.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 413
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 139/331 (41%), Gaps = 27/331 (8%)
Query: 251 GFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEF 309
G + GP +L L ++E A +++ C + G+ +V L+ GA Q+ LR+ P+
Sbjct: 70 GRNARGPMMLALAPTRELATQIQEECMKFGSSCGVGSVCLYGGAPKGRQLQQLRN-RPQI 128
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFND 366
++TP RL L+ + +D+S + +V+D D + IR+ + P T+ F
Sbjct: 129 CIATPGRLNDLLESRMVDMSSATYVVLDEADRMLDMGFEPQIRKILQHVPVDRQTLFFTA 188
Query: 367 CLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ +L I N +Q VA++ I Q++ VC S EK + +++L++
Sbjct: 189 TWPKAVIRVATAILTNPIQVNIGDTDQLVANKD--ITQTIEVC-SGFEKEKRLMEILNNP 245
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG----- 479
+PLK L L G S+ + I+ K E D
Sbjct: 246 ---PEGCDPLKALVFCSTKRMCDQL-------GRSVGNLAG-IIHGDKEQRERDWILNQF 294
Query: 480 -RKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ R V + ++++ +VI DF +++YV + R G SF
Sbjct: 295 RQGRTPVLVATDVAARGLDVKDCNLVINYDFPNQIEDYVHRIGRTGRAGKKGWAFSFIDG 354
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+ A ++I IL Q+V + ++ ++
Sbjct: 355 GEGNMARKLIPILRDANQIVSPEIEEMARSA 385
>gi|213408863|ref|XP_002175202.1| ATP-dependent RNA helicase dbp3 [Schizosaccharomyces japonicus
yFS275]
gi|212003249|gb|EEB08909.1| ATP-dependent RNA helicase dbp3 [Schizosaccharomyces japonicus
yFS275]
Length = 554
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 22/302 (7%)
Query: 272 VRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGV 331
+R + PL G++ V+++ GA Q R E ++ TP RLL L++ A++ S V
Sbjct: 232 MRDLLAPL---GLNVVAVYGGAPKFEQARAAR--EASVIIGTPGRLLDLINDGAVNCSKV 286
Query: 332 SLLVVDRLDSLSKGDTLSLIRQSISGKPHTV-------VFNDCLTYTSVPAVQNLLLGSI 384
LV+D D + IR +S P+ + VF SV + + L
Sbjct: 287 GYLVLDEADRMLDTGFEQDIRNIMSATPNPLAGGQRQTVFFSATWPESVRELASTFLKDP 346
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH--SEPLKVLYIVGK 442
++++ + S I Q V V +K + L+ H + KVL
Sbjct: 347 VKITIGSDELAASHNITQIVEVIDDPRQKEYR----LEALLRKHLKEIGKNGKVLVFALY 402
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--E 500
+ + +TL+ K + + G + +S D K +++ ++ L+ +
Sbjct: 403 KKEAARVENTLRRK-FDV-VGIHGDLSQAARIQALDSFKSGRCNLLVATDVAARGLDIPQ 460
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
++VI F +++++Y+ + R G + FT D HAG++I +L Q Q VPD
Sbjct: 461 VQLVINLTFPLTIEDYIHRIGRTGRANTKGTSITLFTPQDKGHAGELINVLRQANQTVPD 520
Query: 561 AL 562
L
Sbjct: 521 EL 522
>gi|156845404|ref|XP_001645593.1| hypothetical protein Kpol_1033p40 [Vanderwaltozyma polyspora DSM
70294]
gi|160380615|sp|A7TJ36.1|DBP3_VANPO RecName: Full=ATP-dependent RNA helicase DBP3
gi|156116258|gb|EDO17735.1| hypothetical protein Kpol_1033p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 530
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 25/299 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G+ ++ G D Q T L+ + +V+TP RLL L+ A ++S V+ LV+D D
Sbjct: 217 GLECCCVYGGVPKDEQRTQLKRSQ--VVVATPGRLLDLIQEGAANLSNVNYLVLDEADRM 274
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDC-------LTYTSVPAVQNLLLGSINRLSLNQ 391
L KG D ++IR++ S T++F L T + + + +G+ + LS N+
Sbjct: 275 LEKGFEEDIKNIIRETKSTGRQTLMFTATWPKEVRELASTFMNSPIKVSIGNTDELSANK 334
Query: 392 SVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+ I++ ++ E K+L+ ++ + KVL + +
Sbjct: 335 RITQ----IVEVIDPFKK-ERKLLELLKKYQSG-----SKKDDKVLIFALYKKEAARVER 384
Query: 452 TLKCKGYSISTGSNCIVSHIK-NSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L GY +S + + N+++ R ++ + ++ + VI F
Sbjct: 385 NLNYNGYKVSAIHGDLSQQQRTNALDEFKTGRSSILLATDVAARGLDIPNVKTVINLTFP 444
Query: 511 ISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL-CHT 568
+++++YV + R +G H+ FT+ + AG ++ +L GQ VP+ L+ HT
Sbjct: 445 LTVEDYVHRIGRTGRAGKTGTAHTLFTEQEKHLAGSLVNVLNGAGQPVPEELKKFGTHT 503
>gi|386781262|ref|NP_001248109.1| probable ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|380818496|gb|AFE81121.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|383423315|gb|AFH34871.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|384950636|gb|AFI38923.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
Length = 1032
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|410948190|ref|XP_003980824.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Felis catus]
Length = 1030
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 363 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 414
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 415 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 469
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 470 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 528
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 529 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 583
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 584 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 635
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 636 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 694
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 695 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPSDLEKL 751
>gi|393246045|gb|EJD53554.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 849
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 159/392 (40%), Gaps = 49/392 (12%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
D P + S I S +D++ +GS TI + + D ++ S
Sbjct: 205 DRPTPIQSQAI---PAIMSGRDVIGIAKTGSGKTIAFLLPLFRHIKD-----QRPLESME 256
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ V + G+ I QI ++ E +V TP
Sbjct: 257 GPMALVMTPTRELAVQIHRECKPFLKVLGLRAVCAYGGSPIKDQIAEMKKGT-EIVVCTP 315
Query: 315 ERLLKLV---SLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ LV+ DR+ + + I +I TV+F+
Sbjct: 316 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS--- 372
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
+ P + L I + L +V +S I Q V V A D K + +++L Y
Sbjct: 373 --ATFPKQMDSLARKILKKPLEITVGGKSVVAPEIEQIVEVRAED-TKFNRLLEILGQMY 429
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCI-----VSHIKNSVEA 477
+ + L V + NL+ L KGY S+ G + + + KN V
Sbjct: 430 NEDAEC---RTLIFVDRQESADNLLRELIRKGYLVMSLHGGKDQVDRDSTIQDFKNGV-- 484
Query: 478 DGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
V +I ++ L+ + ++V+ D M++YV R G +F
Sbjct: 485 -------VPIITATSVAARGLDVKQLKLVVNYDAPNHMEDYVHRAGRTGRAGNKGTCVTF 537
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
T + ++ + L+ VP L +L +
Sbjct: 538 ITPEQEQYSVDIYRALKASNAKVPPELEELSN 569
>gi|330930035|ref|XP_003302864.1| hypothetical protein PTT_14848 [Pyrenophora teres f. teres 0-1]
gi|311321492|gb|EFQ89040.1| hypothetical protein PTT_14848 [Pyrenophora teres f. teres 0-1]
Length = 601
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 21/297 (7%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ V ++ G D Q+ R +V+TP RL L+ + D+S +V+D D +
Sbjct: 287 GLSVVCVYGGVPKDPQVAACRKAH--IVVATPGRLNDLIGEGSADLSKAEYVVLDEADRM 344
Query: 343 SKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNL---LLGSINRLSL--NQSVA 394
IRQ IS P T++F T T P+V++L + S ++++ NQS
Sbjct: 345 LDKGFEEAIRQIISQTPKKRQTLMF----TATWPPSVRDLASTFMNSPVKITIGDNQSGE 400
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS-KFQNLVSTL 453
++ I+ V +K + +Q+L + + V + K++ + +N +
Sbjct: 401 LRANVRIKQVVEVVDPRDKEQRLLQLLKQYQSGKNKDDRILVFCLYKKEAVRIENFI--- 457
Query: 454 KCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFII 511
+ KG+ + G + +S K S K V ++ ++ L+ +VVI F +
Sbjct: 458 RMKGFRVG-GIHGDLSQEKRSASLAAFKEGHVPLLVATDVAARGLDIPAVKVVINVTFPL 516
Query: 512 SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+ ++YV + R G+ + FT D + +G +I +L+ Q VP+ L T
Sbjct: 517 TAEDYVHRIGRTGRAGKEGLAITLFTDHDKSLSGSLINVLKAANQPVPEELMKFGTT 573
>gi|380011998|ref|XP_003690078.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 566
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 156/368 (42%), Gaps = 25/368 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + ++GS T+ I A + + + RK+ GP L L ++
Sbjct: 138 WPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLGRKD-------GPIALVLAPTR 190
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ V + GI L+ GA Q L E +++TP RLL +
Sbjct: 191 ELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGV-EIVIATPGRLLDFLESGR 249
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LL 381
++ + LV+D D + IR+ I +P T+ V+NL L
Sbjct: 250 TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK--EVKNLAEDFL 307
Query: 382 GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ + + I+Q ++VC D EK K +L + SE +++I
Sbjct: 308 KDYAQINVGSLQLAANHNILQIIDVC-QDYEKENKLSTLLKEIMAE---SENKTIVFIET 363
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
K + + +K G+ ++ V D R A ++ D + ++E+
Sbjct: 364 K-RRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVED 422
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+ VI D+ ++YV + R +G ++FFT +++ A +I++L++ QV+
Sbjct: 423 VKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVINP 482
Query: 561 ALRDLCHT 568
L +L +
Sbjct: 483 KLLELADS 490
>gi|332234495|ref|XP_003266442.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Nomascus
leucogenys]
Length = 1031
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|242767802|ref|XP_002341440.1| DEAD/DEAH box RNA helicase [Talaromyces stipitatus ATCC 10500]
gi|218724636|gb|EED24053.1| DEAD/DEAH box RNA helicase [Talaromyces stipitatus ATCC 10500]
Length = 1175
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 150/324 (46%), Gaps = 19/324 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 615 GPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIVVCTP 673
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLDSL-SKGDTLSLIRQSISGKPH--TVVFNDCL 368
R++ L++ A V+ V+ +V+D D + G +++ + +P+ TV+F+
Sbjct: 674 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPNKQTVLFSATF 733
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V ++ K L+ +++L + Y D
Sbjct: 734 PRNMEALARKTLNKPVEIIVGGRSVVAPE--ITQIVEV-RNENTKFLRLLELLGNLYSDE 790
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAV 485
+ E + L V + +L+ L KGY SI G + I ++S AD +
Sbjct: 791 AN-EDARTLIFVDRQEAADSLLRELMRKGYPCMSIHGGKDQI---DRDSTIADFKAGIFP 846
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+I + ++++ ++V+ D +++YV R +G +F T+D ++
Sbjct: 847 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYS 906
Query: 545 GQMIEILEQCGQVVPDALRDLCHT 568
+ + L+Q GQ VP+ ++ L +
Sbjct: 907 VDIAKALKQSGQAVPEPVQKLVDS 930
>gi|395324143|gb|EJF56589.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1073
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 143/327 (43%), Gaps = 29/327 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP L+ G+ V + G+ I QI ++ E +V TP
Sbjct: 488 GPVAVVMTPTRELAVQIHRECKPFLRVLGLRAVCAYGGSPIKDQIAEMKKGA-EIIVCTP 546
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ LV+D R+ + + I +I TV+F+
Sbjct: 547 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS--- 603
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ P + L I R L +V +S A I+ + +E K + +++L G
Sbjct: 604 --ATFPRQMDSLARKILRKPLEITVGGRSVVAPEIEQIVEVRDEESKFNRLLEIL----G 657
Query: 427 DHFHSEP-LKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
++ +P + L V + NL+ L KGY S+ G + + ++S AD K
Sbjct: 658 QTYNEDPECRTLIFVDRQEGADNLLRELMRKGYLCMSLHGGKDQV---DRDSTIADF-KS 713
Query: 483 PAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
V ++ ++ L+ + ++VI D M++YV R G +F T +
Sbjct: 714 GVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQ 773
Query: 541 AAHAGQMIEILEQCGQVVPDALRDLCH 567
++ + L+ VP L DL +
Sbjct: 774 DRYSVDIYRALKASNAAVPKELEDLSN 800
>gi|158257008|dbj|BAF84477.1| unnamed protein product [Homo sapiens]
Length = 1032
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|72074252|ref|XP_780035.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like isoform 1
[Strongylocentrotus purpuratus]
Length = 883
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 142/325 (43%), Gaps = 46/325 (14%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +V+ V AFG I + ++ GA QI L E +
Sbjct: 183 GPIALVLAPTRELAQQVQQVAF---AFGRSSKIKSTCVYGGAPKGQQIRDLERGV-EICI 238
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ + ++ + +V+D D + IR+ + +P V T+
Sbjct: 239 ATPGRLIDFLENNKTNLRRCTYVVLDEADRMLDMGFEPQIRKIMEQIRPDRQVQMWSATW 298
Query: 371 TSVPAVQNL--------LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLD 422
V+NL ++ +I L+L S + I+Q ++VC D EK K IQ+L+
Sbjct: 299 PK--DVRNLAEDFIRDYIMVNIGSLTL-----SANHNILQIIDVC-EDSEKDKKLIQLLE 350
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNS 474
+ + K L + +LV ++ G+ + ++S +
Sbjct: 351 EIMQEKDN----KTLVFCETKRRTDDLVRRMRRDGWPAMCLHGDKSQPERDWVLSEFR-- 404
Query: 475 VEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
DGR A ++ D S ++ + + VI D+ S ++YV + AR T +G +
Sbjct: 405 ---DGR---APILVATDVASRGLDVTDIKFVINYDYPNSSEDYVHRIGRTARSTRTGTAY 458
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVV 558
+FFT+++ A +I +L++ QV+
Sbjct: 459 TFFTRNNMKQAADLINVLQEAKQVI 483
>gi|8444|emb|CAA37037.1| unnamed protein product [Drosophila melanogaster]
Length = 575
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 210 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 264
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 265 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S EEK+ +L Y
Sbjct: 325 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT---LLSDIYD 381
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 382 TS--ESPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 433
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 434 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 493
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 494 NAKQAKALVDVLREANQEINPALENLARNS 523
>gi|390354880|ref|XP_003728430.1| PREDICTED: ATP-dependent RNA helicase DDX42-like
[Strongylocentrotus purpuratus]
Length = 892
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 151/376 (40%), Gaps = 25/376 (6%)
Query: 199 NPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPF 258
+P + + G+ C I +T GS T + ++ D A K+ +G P
Sbjct: 175 SPTPIQAQGVPIAMCGRDVIGIAKT-GSGKTAAFVWPMLVHIMDQRAIKKGDG-----PI 228
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCE--PEFLVSTPE 315
L ++E A ++ K KA+ IH V + G + Q R+CE PE +V+TP
Sbjct: 229 GLICAPTRELAQQIYMEVKKFGKAYNIHVVCAYGGGNMHEQ---QRACEEGPEVIVATPG 285
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYTS 372
RL+ LV KA ++ VS L+ D D + +R + T++F+
Sbjct: 286 RLIDLVKKKATNLRRVSYLIFDEADRMFDMGFEPQVRSIADHVRPDRQTLLFSATFRKKV 345
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
+++L I + + A+Q + Q V + + K + L F +E
Sbjct: 346 ERLARDILTDPIRVIQGDIGEANQD--VTQVVEIFSDQTRKFPWLLARL-----VRFTTE 398
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL V K + L ++LK K + + ++ ++ + KR A+ ++
Sbjct: 399 G-SVLIFVTKKINAEELATSLKRKDHPYVGLLHGDMNQLERNSVITAFKRRAIPILVATD 457
Query: 493 ISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
++ L+ + V+ D + + + R G ++ K D AG ++
Sbjct: 458 VAARGLDIPSIKNVVNYDVARDIDTHTHRIGRTGRAGEKGTAYTLILKKDNQFAGDLVRN 517
Query: 551 LEQCGQVVPDALRDLC 566
LE Q VP +L DL
Sbjct: 518 LEGADQAVPKSLLDLA 533
>gi|354548342|emb|CCE45078.1| hypothetical protein CPAR2_700820 [Candida parapsilosis]
Length = 559
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 25/364 (6%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W KD++ +GS T A+ V + I E+ G +L + ++E
Sbjct: 175 WPFLLDGKDVIGVAETGSGKTF---AFGVPAINNIITSGEEN----PGLSVLCISPTREL 227
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ + L K I V+++ G + D QI +R +V+TP RL+ L++ A+D
Sbjct: 228 ALQIYDNLQELTKNTSISCVAIYGGVSKDDQINKIRQG-ANVIVATPGRLVDLINDGAVD 286
Query: 328 VSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGS 383
+S ++ LV+D D L KG D +I + + T++F V + N + +
Sbjct: 287 LSSINYLVLDEADRMLEKGFEEDIKHIIGSTNAHNRQTLMFTATWP-KEVRELANAFMHN 345
Query: 384 INRLSL-NQSVASQSACIIQSVNVCASDEEKILKGIQVLD-HAYGDHFHSEPLKVLYIVG 441
+L++ ++ S + I Q V V +K K I +L+ + +G H + V +
Sbjct: 346 PVKLTIGDRDELSANKRITQIVEVLDDKFQKESKLISLLNKYQHGSDGHDNKILVFALYK 405
Query: 442 KD-SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE- 499
K+ S+ ++L+ K K +I + +S + + + K +++ ++ L+
Sbjct: 406 KEASRIESLLRRNKFKVAAI----HGDLSQQQRTQALNSFKSGDCNLLLATDVAARGLDI 461
Query: 500 -EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
+ VI F +++++YV + R SG+ H+ FT+D+ +G + IL Q V
Sbjct: 462 PNVKYVINLTFPLTIEDYVHRIGRTGRAGQSGVAHTLFTEDEKHLSGALCNILRGANQPV 521
Query: 559 PDAL 562
P+ L
Sbjct: 522 PEQL 525
>gi|115437436|ref|NP_001043295.1| Os01g0549400 [Oryza sativa Japonica Group]
gi|143455968|sp|Q5JKF2.2|RH40_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 40
gi|57899403|dbj|BAD88050.1| putative ATP-dependent RNA helicase DB10 [Oryza sativa Japonica
Group]
gi|113532826|dbj|BAF05209.1| Os01g0549400 [Oryza sativa Japonica Group]
gi|125570769|gb|EAZ12284.1| hypothetical protein OsJ_02174 [Oryza sativa Japonica Group]
Length = 792
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 42/331 (12%)
Query: 255 TGPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVS 312
+GP +L L ++E A ++ K ++ I + L+ GA Q+ L R + +V+
Sbjct: 221 SGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVD--VVVA 278
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLT 369
TP RL ++ ++ I + VS LV+D D + IR+ I + T+++
Sbjct: 279 TPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWP 338
Query: 370 YTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLD 422
++LL +GS++ L N ++ I S EK+ + Q+L
Sbjct: 339 KEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPS--------EKLRRLEQIL- 389
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSISTGSNC------IVSHIKNSV 475
KVL L TL + G S G ++SH ++
Sbjct: 390 -----RSQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSG- 443
Query: 476 EADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+ P + D ++++ VVI DF +++YV + R +G+ ++F
Sbjct: 444 -----RSPILVATDV-AARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTF 497
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
F D+ +A +I+ILE Q VP L D+
Sbjct: 498 FCDQDSKYAADLIKILEGANQRVPRDLADMA 528
>gi|303289893|ref|XP_003064234.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454550|gb|EEH51856.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 485
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 138/336 (41%), Gaps = 53/336 (15%)
Query: 257 PFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P + L ++E A ++ C K A G TV+L+ GA+ Q+ LR + +V+TP
Sbjct: 122 PAAIVLAPTRELAIQIGDECAKFCPAAGAKTVTLYGGASKGDQLRALRGGA-DMIVATPG 180
Query: 316 RLLKLVSLKA-----IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDC 367
RL+ ++ + +V+D D + I++ + P T++F
Sbjct: 181 RLIDFLAPPPGFSAPVSAKNAKYVVLDEADRMLDMGFEPQIKKILKLCPDARQTLMFTAT 240
Query: 368 LT---------YTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGI 418
+TS A + RL+ N+S I Q+V + +E+K+ + I
Sbjct: 241 WPEAVKKIAAQFTSADAAHVRIGDGGERLTANKS-------ITQTVEII-DEEDKLRRAI 292
Query: 419 QVL-----DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH--I 471
+VL D G F + +I D K + + + I T + + +
Sbjct: 293 EVLKAELVDGKRGIVFCGTKRRCDFI---DRKIKPATCEARGRFTGIRTKPSARKAPLLV 349
Query: 472 KNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
V A G P V+ VV+V DF + ++YV + R ++G
Sbjct: 350 ATDVAARGLDIPGVA----------------VVLVYDFPLQTEDYVHRIGRTGRAGLTGK 393
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
H FFT D+A A ++++IL+ Q +P+ L ++
Sbjct: 394 AHCFFTSDNAHQAKELVQILQGAEQEIPEVLLEMAE 429
>gi|110737546|dbj|BAF00715.1| DRH1 DEAD box protein - like [Arabidopsis thaliana]
Length = 450
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 144/333 (43%), Gaps = 42/333 (12%)
Query: 253 SFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
S GP +L L ++E A +++ K K+ I L+ GA Q+ + + +V
Sbjct: 35 SRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGV-DIVV 93
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RL ++ +K I + VS LV+D D + IR+ ++ P T+++
Sbjct: 94 ATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW 153
Query: 369 TYTSVPAVQNLLL--GSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+LL+ +N ++++ VA++S I Q++ V A E+
Sbjct: 154 PKEVRKIAADLLVNPAQVNIGNVDELVANKS--ITQTIEVLAPMEK-------------- 197
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLK-----CKGYSISTGSNCIVSHIKNSVEAD--- 478
HS ++L SK ST + + + + G+ I K+ E D
Sbjct: 198 ---HSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGD-KSQAERDDVL 253
Query: 479 -----GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
GR P + D ++++ VV+ DF +++YV + R +G+ +
Sbjct: 254 NQFRSGRT-PVLVATDV-AARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAY 311
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+FF DA HA +I+ILE Q VP +R++
Sbjct: 312 TFFGDQDAKHASDLIKILEGANQKVPPQVREMA 344
>gi|194745414|ref|XP_001955183.1| GF18634 [Drosophila ananassae]
gi|190628220|gb|EDV43744.1| GF18634 [Drosophila ananassae]
Length = 704
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 339 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGSQMRDLQRGCE--IV 393
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S + ++ + LV+D D + IR+ +S +P T
Sbjct: 394 IATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 453
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V VC S EEK+ +L Y
Sbjct: 454 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVEVCDEFSKEEKLKS---LLSDIYD 510
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 511 TS--ENPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 562
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 563 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 622
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL +L S
Sbjct: 623 NAKQAKALVDVLREANQEINPALENLARNS 652
>gi|85540944|sp|Q569Z5.2|DDX46_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
Length = 1032
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|444517226|gb|ELV11421.1| putative ATP-dependent RNA helicase DDX46 [Tupaia chinensis]
Length = 1078
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 411 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 462
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 463 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 517
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 518 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 576
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 577 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 631
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 632 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 683
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 684 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 742
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 743 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 799
>gi|428169082|gb|EKX38019.1| hypothetical protein GUITHDRAFT_115782 [Guillardia theta CCMP2712]
Length = 728
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 33/301 (10%)
Query: 281 AFGI----HTVSLHPGAAIDHQITGL---RSCEPEFLVSTPERLLKLVSLKAIDVSGVSL 333
AFG+ H +SLH A + L R + LV+TP RLL + I++ V+
Sbjct: 404 AFGLPGLTHILSLHQAKAPHTSMLVLAPTRELAMQVLVATPGRLLDFMDEGVIELGKVTF 463
Query: 334 LVVDRLDSLSKGDTLSLIRQSISG---KPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLN 390
LV+D D + +R+ I K TV+++ S+ + L + R+++
Sbjct: 464 LVLDEADRMVDVGFEKEVRKIIGACAKKRQTVMYSATWP-QSIQKIAAEFLSNPARVTVG 522
Query: 391 QSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQN 448
+ + + Q V V A+ + ++L+ ++ +HS +++ I K +
Sbjct: 523 SEDLAANHRVKQIVEVLEPAAKDRRLLEVLK--------KYHSGKNRII-IFALYKKECD 573
Query: 449 LVSTLKCKGYSISTGSNCIVSHIKNSVEA-----DGRKRPAVSMIDKDHISTAELE--EY 501
V +L S G+ H EA + K V ++ ++ L+ +
Sbjct: 574 RVHSLVESKTSFKVGA----IHGDRGQEARTAAIEAFKAGTVPLLIATDVAARGLDIPDV 629
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
E VI F ++ ++YV + R G+ H+FFT D A AG++ +L + GQ VP+A
Sbjct: 630 EYVINYTFPLTTEDYVHRIGRTGRAGKEGVSHTFFTSFDKARAGELCNVLREAGQEVPEA 689
Query: 562 L 562
L
Sbjct: 690 L 690
>gi|349578148|dbj|GAA23314.1| K7_Dbp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 523
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 53/371 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF- 282
+ I +AW + + + G F+F P + L++ Q+K V P +
Sbjct: 136 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELA 195
Query: 283 --------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
G+ ++ G D Q L+ + +V+TP RLL L+ ++D+
Sbjct: 196 SQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQ--VVVATPGRLLDLLQEGSVDL 253
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPA 375
S V+ LV+D D L KG D ++IR++ + K T++F T+ + P
Sbjct: 254 SQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI 313
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 314 --KVSIGNTDQLTANKRITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 358
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GY+++ + + + + + ++ D
Sbjct: 359 NEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 418
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 419 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 478
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 479 NGANQPVPEDL 489
>gi|380014980|ref|XP_003691490.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 728
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 157/367 (42%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 139 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINHQPRLSRG---DGPIVLILAPTREL 193
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A +++SV + FG I + G+ Q L E ++TP RL+ +
Sbjct: 194 AQQIQSVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKG 249
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 250 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLS 309
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
++++ + + I Q V +C + EK +K +L D K++ V
Sbjct: 310 DYIQINIGSLTLAANHNIRQIVEIC-QEHEKEMKLSNLLREIGKDRGS----KMIIFVET 364
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
K ++ +K +G+ + ++ V ++ R + ++ D + ++E+
Sbjct: 365 KKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVEDV 424
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+ VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ +
Sbjct: 425 KYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQAINPQ 484
Query: 562 LRDLCHT 568
L DL ++
Sbjct: 485 LADLANS 491
>gi|398364607|ref|NP_011437.3| RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|1708151|sp|P20447.2|DBP3_YEAST RecName: Full=ATP-dependent RNA helicase DBP3; AltName: Full=DEAD
box protein 3; AltName: Full=Helicase CA3
gi|172582|gb|AAA73137.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1322595|emb|CAA96783.1| DBP3 [Saccharomyces cerevisiae]
gi|285812127|tpg|DAA08027.1| TPA: RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|392299185|gb|EIW10279.1| Dbp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 53/371 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF- 282
+ I +AW + + + G F+F P + L++ Q+K V P +
Sbjct: 136 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELA 195
Query: 283 --------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
G+ ++ G D Q L+ + +V+TP RLL L+ ++D+
Sbjct: 196 SQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQ--VVVATPGRLLDLLQEGSVDL 253
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPA 375
S V+ LV+D D L KG D ++IR++ + K T++F T+ + P
Sbjct: 254 SQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI 313
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 314 --KVSIGNTDQLTANKRITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 358
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GY+++ + + + + + ++ D
Sbjct: 359 NEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 418
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 419 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 478
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 479 NGANQPVPEDL 489
>gi|190407035|gb|EDV10302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207345345|gb|EDZ72198.1| YGL078Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146428|emb|CAY79685.1| Dbp3p [Saccharomyces cerevisiae EC1118]
gi|365765558|gb|EHN07065.1| Dbp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 53/371 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF- 282
+ I +AW + + + G F+F P + L++ Q+K V P +
Sbjct: 136 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELA 195
Query: 283 --------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
G+ ++ G D Q L+ + +V+TP RLL L+ ++D+
Sbjct: 196 SQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQ--VVVATPGRLLDLLQEGSVDL 253
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPA 375
S V+ LV+D D L KG D ++IR++ + K T++F T+ + P
Sbjct: 254 SQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI 313
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 314 --KVSIGNTDQLTANKRITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 358
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GY+++ + + + + + ++ D
Sbjct: 359 NEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 418
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 419 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 478
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 479 NGANQPVPEDL 489
>gi|426350064|ref|XP_004042602.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like, partial
[Gorilla gorilla gorilla]
Length = 882
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 215 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 266
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 267 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 321
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 322 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 380
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 381 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 435
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 436 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 487
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 488 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 546
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 547 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 603
>gi|358379845|gb|EHK17524.1| hypothetical protein TRIVIDRAFT_112589, partial [Trichoderma virens
Gv29-8]
Length = 1252
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 150/336 (44%), Gaps = 32/336 (9%)
Query: 247 KEKEGFSFT-GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRS 304
K++E T GP L + ++E A ++ CKP LK + V + GA I QI L+
Sbjct: 687 KDQEPLKDTDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIRDQIAELKR 746
Query: 305 CEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP- 359
E +V TP R++ L++ + ++ V+ +V+D D + G +++ + +P
Sbjct: 747 GA-EIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANMRPD 805
Query: 360 -HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILK 416
T++F+ ++P + + L + + + +V +S + + EE K ++
Sbjct: 806 RQTILFS-----ATMPRLIDSLTKKVLKSPIEITVGGRSVVAKEIEQIVEIREESTKFVR 860
Query: 417 GIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSV 475
+++L Y E + L V + K +L+ L KGY C+ H K+ V
Sbjct: 861 VLELLGELYD---KDEDARSLIFVERQEKADDLLKELMQKGYP------CMSIHGGKDQV 911
Query: 476 EADGR----KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVS 529
+ D K+ V ++ ++ L+ + ++VI D +++YV R +
Sbjct: 912 DRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNT 971
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
G +F T + A + + LEQ Q VP+ L ++
Sbjct: 972 GTAVTFVTPEQENCAPGIAKALEQSDQPVPERLNEM 1007
>gi|148228442|ref|NP_001082679.1| DEAD (Asp-Glu-Ala-Asp) box helicase 17 [Xenopus laevis]
gi|51704021|gb|AAH80992.1| LOC398649 protein [Xenopus laevis]
Length = 610
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 155 GPICLVLAPTRELAQQVQQVADDYGKTSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 213
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 214 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 273
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L +++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 274 VRQLAEDFLRDYSQINIGNLELSANHNILQIVDVC-QESEKDHKLIQLMEEIMAEKEN-- 330
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + L ++ G+ ++ V + R A +I D
Sbjct: 331 --KTIIFVETKRRCDELTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDV 388
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +++++L
Sbjct: 389 ASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVL 448
Query: 552 EQCGQVVPDALRDL 565
E+ Q + L L
Sbjct: 449 EEANQTINPKLMQL 462
>gi|443926925|gb|ELU45471.1| DEAD/DEAH box RNA helicase [Rhizoctonia solani AG-1 IA]
Length = 1540
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 33/331 (9%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLR-SCEPEFL 310
+ GP + + ++E A ++ CKP LK + V + G+ I QI ++ CE +
Sbjct: 970 TMEGPMAIVMTPTRELAVQIHRECKPFLKVLNLRAVCAYGGSPIKDQIAEMKKGCE--II 1027
Query: 311 VSTPERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVF 364
V TP R++ L+ S + ++ V+ LV+D R+ + + I +I TV+F
Sbjct: 1028 VCTPGRMIDLLTANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLF 1087
Query: 365 NDCLTYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLD 422
+ + P + L I R L +V +S A I + ++E K + +++L
Sbjct: 1088 S-----ATFPKQMDSLARKILRKPLEITVGGRSVVAAEIDQIVEVRTEESKFNRLLEILG 1142
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR- 480
Y + + + L V + NL+ L KGY C+ H K+ V+ D
Sbjct: 1143 QTYNEDSEA---RTLIFVDRQEAADNLLRELMRKGYV------CMSLHGGKDQVDRDATI 1193
Query: 481 ---KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
K V ++ ++ L+ + ++VI D M++YV R G +F
Sbjct: 1194 ADFKAGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTF 1253
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
T + ++ + LE +P L +L
Sbjct: 1254 ITPEQERYSVDIFRALEASKATIPSDLEELV 1284
>gi|355683297|gb|AER97080.1| DEAD box polypeptide 46 [Mustela putorius furo]
Length = 842
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 175 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 226
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 227 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 281
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 282 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 340
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 341 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 395
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 396 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 447
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 448 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 506
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 507 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 563
>gi|62089534|gb|AAH92240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 1027
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|342888955|gb|EGU88166.1| hypothetical protein FOXB_01304 [Fusarium oxysporum Fo5176]
Length = 586
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 160/374 (42%), Gaps = 40/374 (10%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D++ +GS T+ A A I K + P + + E+
Sbjct: 197 WPFTLSGRDVIGVAETGSGKTMA-FALPCVEAVSDIKYKGTKAV-IVSPTRELAMQTYEQ 254
Query: 269 AAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
A V ++ K + V L+ GA+ D Q LR C + +V+TP RL +S +D+
Sbjct: 255 MASVAALNK------LKCVCLYGGASKDDQRNLLR-CGADIIVATPGRLKDFMSDGTVDL 307
Query: 329 SGVSLLVVDRLDSLSKGDTLSLIRQSISG-----KPHTVVFNDCLTYTSVPAVQNLL--- 380
S V+ V+D D + I+Q + K T++F T T +VQ L
Sbjct: 308 SQVTFAVLDEADRMLDKGFEEDIKQILGACLPREKRQTLMF----TATWPQSVQALASSF 363
Query: 381 --------LGSINRLSLNQSVASQSAC-IIQSVNVCASDEEKILKGIQVL-DHAYGDHFH 430
+GS + + + SV Q+ I Q V V EK + +Q+L +H G +
Sbjct: 364 MVTPVKIAIGSGGKETADGSVELQANTRITQRVEVLEP-REKEFRLLQLLKEHQQGKQKN 422
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
L + ++ +N +S KG + G + + + + + K A ++
Sbjct: 423 DRILVFCLYKKEATRVENFLSR---KGIRVG-GIHGDLRQEQRTRSLEAFKSGATPVLVA 478
Query: 491 DHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
++ L+ E ++VI F +++++YV + R +G +FFT +D +H+G ++
Sbjct: 479 TDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGEAITFFTVEDKSHSGSLV 538
Query: 549 EILEQCGQVVPDAL 562
IL Q VP+ L
Sbjct: 539 NILRGANQPVPEDL 552
>gi|294893294|ref|XP_002774400.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239879793|gb|EER06216.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 535
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 47/372 (12%)
Query: 208 IEFWKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSS 265
++ W SS +D++ +GS T+ A+++ A+ E E GP L LV +
Sbjct: 187 MQGWPVASSGRDLVGVAETGSGKTL---AYLMPAIVHIAAQPEVE--QGDGPVALVLVPT 241
Query: 266 QEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
+E + +V + G+ ++ G Q L + PE LV+TP RL+ + A
Sbjct: 242 RELSQQVVEGDE-----GVKIACVYGGQPKRQQERELWTA-PELLVATPGRLIDFLQNGA 295
Query: 326 IDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLG 382
++ V+ LV+D D +L G L I +I T+++ + T +Q+L
Sbjct: 296 TNLKRVTYLVIDEADEMLALGFGRQLDSICSAIRPDRQTLMW----SATWPREIQDLARK 351
Query: 383 SINRLSLNQSVASQS--AC-IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYI 439
+ ++ ++ SQS AC ++ V + VL+ + K L
Sbjct: 352 HCREMPVHINIGSQSLAACHQVRGEGVIGRSRLGVAVVWNVLES-------NGEAKALIF 404
Query: 440 VGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS---------VEADGRKRPAVSMIDK 490
+ L L+ +GY+ + CI S + S + D R A +++ +
Sbjct: 405 CNTKREVDQLTQLLRSQGYN----AVCIHSDKEQSEREWVFAQYRDGDVRLLVATNLMGR 460
Query: 491 DHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+++ + VI D +++ YV + AR G + FT + HA +++I
Sbjct: 461 G----VDIKNIQFVINYDMPQNVEEYVHRIGRTARAGAHGTSITLFTAQEGRHAKDLVDI 516
Query: 551 LEQCGQVVPDAL 562
L + GQ +P+ L
Sbjct: 517 LNEAGQNIPEFL 528
>gi|256269719|gb|EEU04989.1| Dbp3p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 53/371 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF- 282
+ I +AW + + + G F+F P + L++ Q+K V P +
Sbjct: 136 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELA 195
Query: 283 --------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
G+ ++ G D Q L+ + +V+TP RLL L+ ++D+
Sbjct: 196 SQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQ--VVVATPGRLLDLLQEGSVDL 253
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPA 375
S V+ LV+D D L KG D ++IR++ + K T++F T+ + P
Sbjct: 254 SQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI 313
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 314 --KVSIGNTDQLTANKRITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 358
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GY+++ + + + + + ++ D
Sbjct: 359 NEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 418
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 419 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 478
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 479 NGANQPVPEDL 489
>gi|410926900|ref|XP_003976906.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Takifugu
rubripes]
Length = 632
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 168 GPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 226
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 227 GRLIDFLECGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 286
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC SD EK K I++L+ + +
Sbjct: 287 VRQLAEDFLKDYVQINIGALQLSANHNILQIVDVC-SDMEKEDKLIRLLEEIMSEKEN-- 343
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + L ++ G+ ++ V + R A +I D
Sbjct: 344 --KTIIFVETKRRCDELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDV 401
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR +G ++FFT ++ AG +I +L
Sbjct: 402 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAGDLISVL 461
Query: 552 EQCGQVV 558
+ Q +
Sbjct: 462 REANQAI 468
>gi|160420299|ref|NP_666087.3| probable ATP-dependent RNA helicase DDX46 [Mus musculus]
Length = 1031
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|302831193|ref|XP_002947162.1| hypothetical protein VOLCADRAFT_103394 [Volvox carteri f.
nagariensis]
gi|300267569|gb|EFJ51752.1| hypothetical protein VOLCADRAFT_103394 [Volvox carteri f.
nagariensis]
Length = 481
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 20/362 (5%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W + +D++ +GS T+ + + A+++ S GPF + + ++E
Sbjct: 94 WPIILAGRDLIGIAATGSGKTL---GFGLPMLRHIAAQRDNGVVSGKGPFAIVMAPTREL 150
Query: 269 AAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ V + + + TV ++ G Q+ L+S E +V TP R+ L++ +
Sbjct: 151 ALQINQVLEEAGSQCSVRTVCVYGGVPKGPQVAALKSGV-EVVVGTPGRMEDLLNDGVLQ 209
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSIN-- 385
+ V+ V+D D + IR +I G + T AVQ L + ++
Sbjct: 210 LKKVTYAVLDEADRMLDLGFEPHIR-AIMGLTRADRQTLMFSATWPAAVQKLAIAFLSHP 268
Query: 386 -RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
++++ + S I Q V+V + + +++L +G + + + K++
Sbjct: 269 VKVTIGSQDLAASHSITQRVDVIDPNARD-GRLLELLQQYHGAKGRKNRVIIFVLYKKEA 327
Query: 445 -KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EY 501
+ + L+S K +I + +S + + D K V ++ ++ L+ +
Sbjct: 328 PRVEQLLSRKGWKAVAI----HGDISQQQRTDAVDKFKSGVVPLLIATDVAARGLDIPDV 383
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF-TKDDAAHAGQMIEILEQCGQVVPD 560
EVVI F ++ ++YV + R +GI H+FF D AG++I +L + GQ VP
Sbjct: 384 EVVINYSFPLTTEDYVHRIGRTGRAGKTGIAHTFFCAGPDKPRAGELINVLREAGQEVPA 443
Query: 561 AL 562
L
Sbjct: 444 EL 445
>gi|323305025|gb|EGA58779.1| Dbp3p [Saccharomyces cerevisiae FostersB]
gi|323337602|gb|EGA78847.1| Dbp3p [Saccharomyces cerevisiae Vin13]
Length = 349
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 34/297 (11%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G+ ++ G D Q L+ + +V+TP RLL L+ ++D+S V+ LV+D D
Sbjct: 36 GMQCCCVYGGVPKDEQRIQLKKSQ--VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRM 93
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPAVQNLLLGSINRLSL 389
L KG D ++IR++ + K T++F T+ + P + +G+ ++L+
Sbjct: 94 LEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI--KVSIGNTDQLTA 151
Query: 390 NQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK---VLYIVGKDSKF 446
N+ + I++ V+ E K+L+ ++ +HS P K VL +
Sbjct: 152 NKRITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKKNEKVLIFALYKKEA 198
Query: 447 QNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVI 505
+ LK GY+++ + + + + + ++ D + ++ + VI
Sbjct: 199 ARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVI 258
Query: 506 VPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
F +++++YV + R +G H+ FT+ + AG ++ +L Q VP+ L
Sbjct: 259 NLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDL 315
>gi|195399942|ref|XP_002058578.1| GJ14499 [Drosophila virilis]
gi|194142138|gb|EDW58546.1| GJ14499 [Drosophila virilis]
Length = 733
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 163/399 (40%), Gaps = 46/399 (11%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI-LETSGSSSTIVQI--AWIVATAADSIAR 246
+R G + P+ W I S A + + +GS T+ I A + + R
Sbjct: 297 IRRQGYKSPTPIQAQGWPI----AMSGANFVGIAKTGSGKTLGYILPAIVHINNQQPLQR 352
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL 302
E GP L L ++E A +++ V FG + + GA Q+ L
Sbjct: 353 GE-------GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDL 402
Query: 303 -RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPH 360
R CE +++TP RL+ +S + ++ + LV+D D + IR+ +S +P
Sbjct: 403 QRGCE--IVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 460
Query: 361 TVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKG 417
T+ V + LG+ ++++ S + I Q V+VC S E+K+
Sbjct: 461 RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEDKLKS- 519
Query: 418 IQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVE 476
+L Y P K++ V + NLV ++ S G C H K+ E
Sbjct: 520 --LLSDIYDTS--ENPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSE 569
Query: 477 ADGRKRPAVSMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530
D R S ++T +++ + VI D+ + ++Y+ + R G
Sbjct: 570 RDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKG 629
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+FFTK++A A ++++L + Q + AL +L S
Sbjct: 630 TSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNS 668
>gi|195109284|ref|XP_001999217.1| GI23184 [Drosophila mojavensis]
gi|193915811|gb|EDW14678.1| GI23184 [Drosophila mojavensis]
Length = 724
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 32/330 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 349 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 403
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ +S A ++ + LV+D D + IR+ +S +P T
Sbjct: 404 IATPGRLIDFLSAGATNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 463
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQVLDHAYG 426
+ V + LG+ ++++ S + I Q V+VC S E+K+ +L Y
Sbjct: 464 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEDKLKS---LLSDIYD 520
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPAV 485
P K++ V + NLV ++ S G C H K+ E D R
Sbjct: 521 TS--ENPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERDFVLREFR 572
Query: 486 SMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S ++T +++ + VI D+ + ++Y+ + R G +FFTK+
Sbjct: 573 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 632
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+A A ++++L + Q + AL ++ S
Sbjct: 633 NAKQAKALVDVLREANQEINPALENMARNS 662
>gi|449500065|ref|XP_004160994.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Cucumis
sativus]
Length = 532
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 138/315 (43%), Gaps = 19/315 (6%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ SV + K G+ + L+ G + QI+ L+S + ++ TP
Sbjct: 188 PLCLVLSPTRELAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGV-DIVIGTPG 246
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
RL L+ ++ ++ VS +V+D D + + + S++ Q+ + + V+F+
Sbjct: 247 RLKDLMEMEVCRLAEVSFVVLDEADRMLDMGFEPEVRSILSQTCTER-QMVMFSATWPLQ 305
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH- 430
Q + ++ + + + ++Q V V G A + +H
Sbjct: 306 VNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRLRDDRLG------ALLEKYHK 359
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIVSHIKNSVEADGRKRPAVSMI 488
S+ +VL V ++ + L+ +G+ + G K P MI
Sbjct: 360 SQRNRVLVFVLYKNEAARVERMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSSPL--MI 417
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D + ++ + EVVI F ++ ++YV + R G+ H+FF + + AG++
Sbjct: 418 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 477
Query: 548 IEILEQCGQVVPDAL 562
+ +L + QVVPDAL
Sbjct: 478 VNVLREAKQVVPDAL 492
>gi|148709275|gb|EDL41221.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 963
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 296 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 347
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 348 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 402
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 403 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 461
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 462 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 516
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 517 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 568
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 569 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 627
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 628 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 684
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 362 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 413
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 414 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 468
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 469 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 527
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 528 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 582
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 583 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 634
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 635 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 693
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 694 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 750
>gi|344240362|gb|EGV96465.1| putative ATP-dependent RNA helicase DDX46 [Cricetulus griseus]
Length = 1172
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 505 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 556
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 557 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 611
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 612 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 670
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 671 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 725
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 726 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 777
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 778 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 836
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 837 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 893
>gi|324510721|gb|ADY44481.1| ATP-dependent RNA helicase abstrakt, partial [Ascaris suum]
Length = 462
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 152/368 (41%), Gaps = 35/368 (9%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W SS +DI+ +GS T+ I + R EG P +L L+ ++E
Sbjct: 89 WPIASSGRDIVSIAKTGSGKTLAFILPGIIHTTKQPPRGRGEG-----PSVLVLLPTREL 143
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +V+ V + KA G+ L GAA Q L + ++TP RLL + +
Sbjct: 144 AQQVQEVSREYCKAMGLSVTCLFGGAARGSQARDLERG-VDVAIATPGRLLDFLESGTTN 202
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSIS---GKPHTVVFNDCLTYTSVPAVQNLLLGSI 384
+ S LV+D D + IR S G+ T++F+ + +QN ++
Sbjct: 203 LRRCSYLVLDEADRMLDMGFEEEIRTIFSFFKGQRQTLLFSATMPRK----IQNFARSAL 258
Query: 385 NR-LSLNQSVASQSAC-IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
R + +N A ++ ++Q + +DE K ++L D P +VL K
Sbjct: 259 VRAIIVNVGRAGAASLNVLQEIEYVRADE----KLTRIL-----DCLQKTPPRVLIFAEK 309
Query: 443 DSKFQNLVSTLKCKGYSIST---GSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-EL 498
S N+ L KG +++ G + H V+A R V ++ D S +
Sbjct: 310 KSDVDNIYEYLLVKGVDVASLHGGKDQKDRH--TGVDAFRRGEKDV-LVATDVASKGLDF 366
Query: 499 EEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD-DAAHAGQMIEILEQCGQV 557
E + VI D ++NYV + R G+ +F + D + + +L + GQ
Sbjct: 367 ENIQHVINFDMPEDIENYVHRIGRTGRSGKKGMATTFVNRRADMSVLQDLRALLLEAGQQ 426
Query: 558 VPDALRDL 565
+P LRD+
Sbjct: 427 LPLFLRDI 434
>gi|307202009|gb|EFN81574.1| Probable ATP-dependent RNA helicase DDX17 [Harpegnathos saltator]
Length = 724
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 159/367 (43%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 139 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINHQPRLSRG---DGPIVLILAPTREL 193
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A ++++V + FG I + G+ Q L E ++TP RL+ +
Sbjct: 194 AQQIQTVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKG 249
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 250 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLT 309
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
++++ + + I Q V +C + EK K Q+L G S K++ V
Sbjct: 310 DYIQINIGSLTLAANHNIRQIVEIC-QEHEKETKLSQLL-REIGTERGS---KMIIFVET 364
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
K ++ +K +G+S + ++ V ++ R + ++ D + ++E+
Sbjct: 365 KKKVDDITKAIKREGWSAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVEDV 424
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+ VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ +
Sbjct: 425 KYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELIAVLEEAGQAINPQ 484
Query: 562 LRDLCHT 568
L D+ ++
Sbjct: 485 LADMANS 491
>gi|449453334|ref|XP_004144413.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Cucumis
sativus]
Length = 532
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 138/315 (43%), Gaps = 19/315 (6%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ SV + K G+ + L+ G + QI+ L+S + ++ TP
Sbjct: 188 PLCLVLSPTRELAQQISSVLENAGKPCGVMSTCLYGGVSKGSQISCLKSGV-DIVIGTPG 246
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
RL L+ ++ ++ VS +V+D D + + + S++ Q+ + + V+F+
Sbjct: 247 RLKDLMEMEVCRLAEVSFVVLDEADRMLDMGFEPEVRSILSQTCTER-QMVMFSATWPLQ 305
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH- 430
Q + ++ + + + ++Q V V G A + +H
Sbjct: 306 VNQLAQEFMDPDPVKVVVGSEDLAANHDVMQIVEVLDDRLRDDRLG------ALLEKYHK 359
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIVSHIKNSVEADGRKRPAVSMI 488
S+ +VL V ++ + L+ +G+ + G K P MI
Sbjct: 360 SQRNRVLVFVLYKNEAARVERMLQRRGWKAVSIHGDKAQTERTKALSLFKSGSYPL--MI 417
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D + ++ + EVVI F ++ ++YV + R G+ H+FF + + AG++
Sbjct: 418 ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGEL 477
Query: 548 IEILEQCGQVVPDAL 562
+ +L + QVVPDAL
Sbjct: 478 VNVLREAKQVVPDAL 492
>gi|5410326|gb|AAD43033.1| RNA helicase [Homo sapiens]
Length = 1031
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 171/416 (41%), Gaps = 44/416 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKA 281
+GS TI + + D + +E EG P + + ++E A ++ + K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PLAVIMTPTRELALQIPKGVRSFKT 470
Query: 282 FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVDR 338
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 LGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDE 529
Query: 339 LDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVAS 395
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 ADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVGG 584
Query: 396 QSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 RSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLLK 636
Query: 452 TLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFII 511
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 DLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYSC 695
Query: 512 S--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 PNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 751
>gi|348677119|gb|EGZ16936.1| hypothetical protein PHYSODRAFT_300186 [Phytophthora sojae]
Length = 564
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 155/380 (40%), Gaps = 37/380 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSF 254
D P + S + W +S +DI+ ET + I ++ AA +
Sbjct: 169 DKPTPIQS---QCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPAVSPKH----- 220
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
GP +L + ++E A + +V K G+ ++ ++ G Q LR +V+T
Sbjct: 221 PGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKQAQKKALRDGV-HVVVAT 279
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV 373
P RL LV ++ ++S V+ +V+D D + IR +I G H + T
Sbjct: 280 PGRLKDLVEERSCNLSKVTFVVLDEADRMLDDGFEKDIR-AIIGSTHPERQIAMFSATWP 338
Query: 374 PAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
++Q L L ++++ + S + Q V V D + + HA +H
Sbjct: 339 QSIQKLAHEFLNDPVKVTIGSDELAASGNVTQIVEVI-DDRARDARA-----HALLQKYH 392
Query: 431 S-EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE-----ADGRKRPA 484
S +VL V + + L +G+ NCI H S + + K
Sbjct: 393 SSRKNRVLLFVLYKKEADRVERMLHQRGW------NCIAIHGDRSQQQRSEAVEQFKSGE 446
Query: 485 VSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
V ++ ++ L+ E V+ F +++++YV + R G H+FFT +D
Sbjct: 447 VPLLIATDVAARGLDIPGVEYVLNYSFPLTIEDYVHRIGRTGRGGKKGTAHTFFTANDKP 506
Query: 543 HAGQMIEILEQCGQVVPDAL 562
AG+++ +L Q VP+ L
Sbjct: 507 RAGELVNLLRDSNQEVPNDL 526
>gi|195498992|ref|XP_002096759.1| GE25850 [Drosophila yakuba]
gi|194182860|gb|EDW96471.1| GE25850 [Drosophila yakuba]
Length = 688
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 22/321 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
G +L L ++E A ++ K + V ++ G QI+ L E ++ TP
Sbjct: 342 GANVLVLAPTRELALQIEMEVKKYSFRNMKAVCVYGGGDRRMQISDLERGA-EIIICTPG 400
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL LV IDVS ++ LV+D D L G + + + +P T+ P
Sbjct: 401 RLNDLVQANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWP--P 458
Query: 375 AVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V+ L + ++ + + + + Q + + D EK + + S
Sbjct: 459 GVRRLAQSYMKNPIQVCVGSLDLAATHSVKQVIQLLEDDREKFSTIKSFVRNM------S 512
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE----ADGRKRPAVSM 487
K++ G+ ++ +L S L G+ + CI + S AD + +
Sbjct: 513 NTDKIIIFCGRKARADDLSSDLTLDGFM----TQCIHGNRDQSDREQAIADIKSGAVHIL 568
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D S ++E+ VI DF +++ YV + R G SF T++D A +
Sbjct: 569 VATDVASRGLDIEDITHVINYDFPRNIEEYVHRVGRTGRAGRKGTSISFITREDWGMAKE 628
Query: 547 MIEILEQCGQVVPDALRDLCH 567
+I+IL++ Q VPD L ++
Sbjct: 629 LIDILQEAEQEVPDELHNMAR 649
>gi|353238668|emb|CCA70607.1| related to RNA helicase [Piriformospora indica DSM 11827]
Length = 1042
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 154/374 (41%), Gaps = 46/374 (12%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS TI + + D ++ EG P L + ++E A ++
Sbjct: 416 SGRDIIGVAKTGSGKTIAFLLPLFRQIKDQRPLEQMEG-----PMALVMTPTRELAVQIH 470
Query: 274 SVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVS 329
CKP LKA + V + G+ I QI L+ E +V TP R++ L+ S + ++
Sbjct: 471 RECKPFLKALNLRAVCAYGGSPIKDQIAELKKGA-EIIVCTPGRMIDLLTANSGRVTNLK 529
Query: 330 GVSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINR 386
V+ LV+D D + G +++ +I TV+F+ + P + L I
Sbjct: 530 RVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS-----ATFPKQMDSLARKILN 584
Query: 387 LSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD 443
L +V +S I Q V V D K + +Q+L D ++ ++L V +
Sbjct: 585 KPLEITVGGRSVVAPEITQLVEVRTEDT-KFNRLLQILGEQMNDDQNA---RILVFVDRQ 640
Query: 444 SKFQNLVSTLKCKGYSIST---GSNCI-----VSHIKNSVEADGRKRPAVSMIDKDHIST 495
NL+ L K Y T G + + ++ KN V ++++ ++
Sbjct: 641 EHADNLMKDLLKKNYMTGTLHGGKDQVDRDQTIADFKNGV---------ITIVIATSVAA 691
Query: 496 AELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQ 553
L+ + +VVI D M++YV R G +F T D ++ + L+
Sbjct: 692 RGLDVKQLKVVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPDQERYSVDIFRALKA 751
Query: 554 CGQVVPDALRDLCH 567
VP L L +
Sbjct: 752 SNAEVPPELEALAN 765
>gi|62857657|ref|NP_001016781.1| DEAD (Asp-Glu-Ala-Asp) box helicase 17 [Xenopus (Silurana)
tropicalis]
Length = 609
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ + + ++ GA QI L E ++TP
Sbjct: 155 GPICLVLAPTRELAQQVQQVADDYGKSSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 213
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 214 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 273
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 274 VRQLAEDFLRDYVQINIGNLELSANHNILQIVDVC-QESEKDHKLIQLMEEIMAEKEN-- 330
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + R A +I D
Sbjct: 331 --KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDV 388
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +++++L
Sbjct: 389 ASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVL 448
Query: 552 EQCGQVVPDALRDL 565
E+ Q + L L
Sbjct: 449 EEANQTINPKLMQL 462
>gi|198452778|ref|XP_001358938.2| GA10214 [Drosophila pseudoobscura pseudoobscura]
gi|198132073|gb|EAL28081.2| GA10214 [Drosophila pseudoobscura pseudoobscura]
Length = 738
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 163/403 (40%), Gaps = 46/403 (11%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI-LETSGSSSTIVQI--AWIVATAAD 242
+ +R G ++ P+ W I S A + + +GS T+ I A +
Sbjct: 307 VTKEIRRQGYKEPTPIQAQGWPI----AMSGANFVGIAKTGSGKTLGYILPAIVHINNQQ 362
Query: 243 SIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQ 298
+ R + GP L L ++E A +++ V FG + + GA Q
Sbjct: 363 PLQRGD-------GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQ 412
Query: 299 ITGL-RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG 357
+ L R CE +++TP RL+ +S ++ + LV+D D + IR+ +S
Sbjct: 413 MRDLQRGCE--IVIATPGRLIDFLSSGGTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQ 470
Query: 358 -KPHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEK 413
+P T+ V + LG+ ++++ S + I Q V VC S EEK
Sbjct: 471 IRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVEVCDEFSKEEK 530
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IK 472
+ +L Y P K++ V + NLV ++ S G C H K
Sbjct: 531 LKS---LLSDIYDTS--ENPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDK 579
Query: 473 NSVEADGRKRPAVSMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+ E D R S ++T +++ + VI D+ + ++Y+ + R
Sbjct: 580 SQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRS 639
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
G +FFTK++A A ++++L + Q + AL +L S
Sbjct: 640 NTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNS 682
>gi|169600899|ref|XP_001793872.1| hypothetical protein SNOG_03302 [Phaeosphaeria nodorum SN15]
gi|118575175|sp|Q0UY62.1|DBP3_PHANO RecName: Full=ATP-dependent RNA helicase DBP3
gi|111068913|gb|EAT90033.1| hypothetical protein SNOG_03302 [Phaeosphaeria nodorum SN15]
Length = 592
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ V ++ G D Q+ R +V+TP RL L+ + D+S +V+D D +
Sbjct: 278 GLSVVCVYGGVPKDPQVAACRKAH--IVVATPGRLNDLIGDGSADLSNADYVVLDEADRM 335
Query: 343 SKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNL---LLGSINRLSL--NQSVA 394
IRQ IS P T++F T T P+V++L + S R+++ NQS
Sbjct: 336 LDKGFEEPIRQIISQTPKKRQTLMF----TATWPPSVRDLASTFMVSPVRITIGDNQSGE 391
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS-KFQNLVSTL 453
++ I+ + K + +Q+L + + V + K++ + +N +
Sbjct: 392 LRANVRIKQLVEVLDPHAKEQRLLQLLKQYQSGKNKDDRILVFCLYKKEAMRIENFI--- 448
Query: 454 KCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFII 511
+ KG+ + G + +S K S K V ++ ++ L+ ++VI F +
Sbjct: 449 RMKGFRVG-GIHGDLSQEKRSASLAAFKEGQVPLLVATDVAARGLDIPAVKLVINVTFPL 507
Query: 512 SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+ ++YV + R G+ +FFT+ D +G +I +L+ Q VP+ L
Sbjct: 508 TAEDYVHRIGRTGRAGKEGLAITFFTEHDKGLSGSLINVLKAANQEVPEEL 558
>gi|85118552|ref|XP_965469.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|74662807|sp|Q7SH33.1|PRP5_NEUCR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp-5
gi|28927278|gb|EAA36233.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|38567223|emb|CAE76515.1| related to RNA helicase [Neurospora crassa]
Length = 1194
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L + ++E ++ S +P KA + V+ + G AI QI L+ E +V+TP
Sbjct: 634 GAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAELKRGA-EIIVATP 692
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
RL+ L++ V+ + + LV+D D + G +++ + +P T++F+
Sbjct: 693 GRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 749
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + +V +S I Q V V + +K + +++L Y
Sbjct: 750 --ATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQIVEVM-DEGKKFNRLLELLGELY 806
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
D + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 807 AD---DDDVRSLIFVERQEKADDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 860
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I + ++++ ++VI D +++YV R +G +F T++
Sbjct: 861 VCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 920
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VPD L ++
Sbjct: 921 NCASGIAKALEQSGQPVPDRLNEM 944
>gi|402468212|gb|EJW03398.1| hypothetical protein EDEG_02255 [Edhazardia aedis USNM 41457]
Length = 483
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 165/367 (44%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W + +D+ + +GS T+ + + AAD ++ + GP +L L ++E
Sbjct: 116 WTMALNGRDMVGIAQTGSGKTLSFVLPALIHAADQPKLRQ-----YDGPIVLILAPTREL 170
Query: 269 AAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
++ V K F + + +++ G + Q LR E +V+TP RL+ L +
Sbjct: 171 VLQINEVVNAYKRYFSMRSTTIYGGVSSYPQKQDLRDGV-EIVVATPGRLIDLYNQGCFS 229
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA--VQNLLLGSIN 385
+S V+ LV+D D + ++Q I P T L +++ V++L L +
Sbjct: 230 LSRVTFLVLDEADRMLDMGFEPQLKQII---PKTNPDRQTLMWSATWPREVKSLALNYMK 286
Query: 386 ---RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG-DHFHSEPLKVLYIVG 441
++++ + + + I Q V +C + K + I++L G D+ ++ K++
Sbjct: 287 DFIQVNIGEDDLAANKNIEQRV-ICIENHSKKTELIKILRKYIGADNRNTSRKKIIVFCN 345
Query: 442 KDSKFQNLVSTLKC-KGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELE 499
NL L+ + Y+I+ + + ++ V D + +I D + +++
Sbjct: 346 TKRMCDNLEYFLEDERFYAIAIHGDK-SQNARDKVIYDFKSGRKNILIATDVAARGLDVK 404
Query: 500 EYEVVIVPDFIISMKNYVEILTSMAR-HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
+ +VI DF ++YV + AR GI SFFT +D +A +++++L G V
Sbjct: 405 DVFMVINYDFPKLCEDYVHRIGRTARGENTKGISISFFTYEDKGNARELVKLLTDSGSEV 464
Query: 559 PDALRDL 565
P LR++
Sbjct: 465 PSELREM 471
>gi|334324021|ref|XP_003340472.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Monodelphis domestica]
Length = 993
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 45/327 (13%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGA----AIDHQITGLRSCEPEFLV 311
GP +L L ++E A +V S CK GI ++ ++ G I+H G+ + ++
Sbjct: 661 GPGMLVLTPTRELALQVESECKKYTYKGIKSICIYGGGDRRGQIEHVTKGV-----DIVI 715
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPH------TVVF 364
+TP RL L + I+++ ++ LV+D D L G +++ + +P + +
Sbjct: 716 ATPGRLNDLQMNEFINLNSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTIMTSATW 775
Query: 365 NDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
D + S + + ++ + L L + II +++EK L H+
Sbjct: 776 PDAVRRLSQKYLNDPMIVYVGTLDLAAVNTVKQKIII------TTEQEK-----PALIHS 824
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP- 483
+ D E KV+ VG+ ++ S L KG + + + + E R+R
Sbjct: 825 FIDSMKPED-KVIIFVGRKLIADDISSDLSIKGLPVQS--------LHGNREQSDRERAL 875
Query: 484 ------AVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
V ++ +++ L+ ++ V DF +++ YV + R +G +
Sbjct: 876 NEFKTGIVRILIATDLASRGLDVLDITHVFNFDFPRNLEEYVHRVGRTGRAGHTGESITL 935
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDAL 562
T++D AG++I ILE+ Q +P+ L
Sbjct: 936 LTRNDWKIAGELINILERANQEIPNEL 962
>gi|328784461|ref|XP_623668.3| PREDICTED: ATP-dependent RNA helicase p62-like isoform 1 [Apis
mellifera]
Length = 527
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 138/322 (42%), Gaps = 27/322 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSV-CKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
GP L L ++E A +++ V C +FG + + + GA Q L E ++T
Sbjct: 188 GPIALILAPTRELAQQIQKVTC----SFGYVRSTCIFGGAPKGSQARDLEQGV-EICIAT 242
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS 372
P RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 243 PGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPK 302
Query: 373 VPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGD 427
V+NL L +L++ S + I+Q V+VC DE+ K+ +Q + + D
Sbjct: 303 --EVRNLAEEYLVDYTQLNIGSLTLSANHNILQIVDVCEEDEKQTKLQNLLQEISNVSPD 360
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI---VSHIKNSVEADGRKRPA 484
K + V K +++ T++ G+ + CI S ++ +
Sbjct: 361 GG-----KTIIFVETKKKVESITKTIRRYGWP----AVCIHGDKSQLERDFVLSDWNKGK 411
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
V I + I + ++++ + VI D+ S ++Y+ + R SG ++FFT + A
Sbjct: 412 VHYIYFNKIVSLDVDDVKYVINFDYPNSSEDYIHRIGRTGRSNNSGTSYAFFTPQNGRQA 471
Query: 545 GQMIEILEQCGQVVPDALRDLC 566
++ +L + Q++ L +L
Sbjct: 472 KSLVNVLREAKQIINPKLMELA 493
>gi|340718889|ref|XP_003397895.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Bombus
terrestris]
Length = 662
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 130/317 (41%), Gaps = 17/317 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A ++ GI V ++ G Q+ + E +++TP
Sbjct: 324 GPTVLVLAPTRELALQIEKEVNKYSYHGIKAVCVYGGGCRKKQVDVVTEG-VEIVIATPG 382
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQS-ISGKPHTVVFNDCLTYTSVP 374
RL LV + +DVS VS LV+D D + IR++ I +P +T + P
Sbjct: 383 RLNDLVRTEVLDVSTVSYLVLDEADRMLDMGFEPQIRKALIDVRPDR---QTVMTSATWP 439
Query: 375 AVQNLLLGSINRLSLNQSVASQSAC----IIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
L S + + V S ++Q + + +++ + D A D
Sbjct: 440 ITVRRLAKSYMKNPIQVYVGSLDLVAVHTVLQKIYIIDENDKTDMMHQFFRDMAPND--- 496
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
KV+ K +K ++ S L + S+ + + + A ++
Sbjct: 497 ----KVIVFFAKKAKVDDVASDLALMAVNCSSIHGGREQADREQALEELKTGEARILLAT 552
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D S ++++ V+ DF ++ YV + R +G ++ T+ D +HA ++I
Sbjct: 553 DVASRGIDIDDITHVLNFDFPRDIEEYVHRVGRTGRAGRTGESITYMTRSDWSHARELIN 612
Query: 550 ILEQCGQVVPDALRDLC 566
ILE+ Q VP+ L +
Sbjct: 613 ILEEANQEVPEELYQMA 629
>gi|410918227|ref|XP_003972587.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Takifugu
rubripes]
Length = 638
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +V+ V K I + ++ GA QI L E ++TP
Sbjct: 167 GPIVLVLAPTRELAQQVQQVAFDYGKCSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ + +P T+
Sbjct: 226 GRLIDFLECEKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKE 285
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +E K K IQ+++ + +
Sbjct: 286 VRQLAEDFLKEYIQINIGALELSANHNILQIVDVCLENE-KDEKLIQLMEEIMAEKEN-- 342
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + R A +I D
Sbjct: 343 --KTIIFVETKKRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVITEFRSGKAPILIATDV 400
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++ +L
Sbjct: 401 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVL 460
Query: 552 EQCGQVVPDALRDL 565
E+ Q + LR L
Sbjct: 461 EEARQAINPKLRQL 474
>gi|426198422|gb|EKV48348.1| hypothetical protein AGABI2DRAFT_191977 [Agaricus bisporus var.
bisporus H97]
Length = 1063
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 35/332 (10%)
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
GP + + ++E A ++ CKP LK G+ V + G+ I QI L+ E +V
Sbjct: 469 MEGPIAVVMTPTRELAVQIHKDCKPFLKVLGLRAVCAYGGSPIKDQIAELKKGA-EIIVC 527
Query: 313 TPERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFND 366
TP R++ L+ S + ++ V+ +V+D D + G +++ + +P TV+F+
Sbjct: 528 TPGRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIVNNTRPDRQTVLFS- 586
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQS---ACIIQSVNVCASDEEKILKGIQVLDH 423
+ P + L I R L +V +S A I Q V V A D K + +++L
Sbjct: 587 ----ATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRAEDT-KFNRLLEIL-- 639
Query: 424 AYGDHFHSEP-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR- 480
G ++ +P + L V + NL+ L KGY C+ H K+ V+ D
Sbjct: 640 --GQMYNEDPECRTLIFVDRQEAADNLLRELMRKGYL------CMSLHGGKDQVDRDQTI 691
Query: 481 ---KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
K V ++ ++ L+ + ++VI D M++YV R G +F
Sbjct: 692 ADFKSGVVPIVIATSVAARGLDVKQLKLVINHDAPNHMEDYVHRAGRTGRAGNKGTCVTF 751
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
T + ++ + L+ +P L DL +
Sbjct: 752 ITPEQDRYSVDIHRALKASNASIPQELEDLAN 783
>gi|194904159|ref|XP_001981012.1| GG23261 [Drosophila erecta]
gi|190652715|gb|EDV49970.1| GG23261 [Drosophila erecta]
Length = 709
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 133/321 (41%), Gaps = 22/321 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
G +L L ++E A ++ K + V ++ G QI+ L E ++ TP
Sbjct: 363 GANVLVLAPTRELALQIEMEVKKYSFRDMKAVCVYGGGDRRMQISDLERG-AEIIICTPG 421
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL LV IDVS ++ LV+D D L G + + + +P T+ P
Sbjct: 422 RLNDLVQANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWP--P 479
Query: 375 AVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V+ L + ++ + + + + Q + + D+EK + + S
Sbjct: 480 GVRRLAQSYMKNPIQVCVGSLDLAATHSVKQVIQLLEDDKEKFNTIKSFVRNM------S 533
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI---VSHIKNSVEADGRKRPAVSMI 488
K++ G+ ++ +L S L G+ + CI I K AV ++
Sbjct: 534 NTDKIIIFCGRKARADDLSSELTLDGFM----TQCIHGNRDQIDREQAIADIKSGAVHIL 589
Query: 489 DKDHISTA--ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+++ ++E+ VI DF +++ YV + R G SF T++D A +
Sbjct: 590 VATDVASRGLDIEDITHVINYDFPRNIEEYVHRVGRTGRAGRKGTSISFITREDWGMAKE 649
Query: 547 MIEILEQCGQVVPDALRDLCH 567
+I+IL++ Q VPD L ++
Sbjct: 650 LIDILQEAEQEVPDELHNMAR 670
>gi|289742973|gb|ADD20234.1| ATP-dependent RNA helicase [Glossina morsitans morsitans]
Length = 616
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 34/331 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-RSCEPEFL 310
GP L L ++E A +++ V FG + + GA Q+ L R CE +
Sbjct: 206 GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE--IV 260
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLT 369
++TP RL+ ++ A ++ + LV+D D + IR+ +S +P T
Sbjct: 261 IATPGRLIDFLAAGATNLKRCTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQTLMWSAT 320
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC-ASDEEKILKGI--QVLDHAY 425
+ V + LG+ ++++ S + I Q + +C +D+E LK + Q+ D
Sbjct: 321 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVIEICDENDKETKLKSLLSQIYDTG- 379
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEADGRKRPA 484
P K++ V + +LV ++ S G C H K+ E D R
Sbjct: 380 -----ENPGKIIIFVETKRRVDHLVRYIR------SFGVRCGAIHGDKSQSERDFVLREF 428
Query: 485 VSMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
S ++T +++ + VI D+ S ++Y+ + R G ++FFT+
Sbjct: 429 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQSSEDYIHRIGRTGRSNTKGTSYAFFTR 488
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
++A + ++E+L++ Q + L + S
Sbjct: 489 NNAKQSKALLEVLKEANQEICPGLESMARNS 519
>gi|350296822|gb|EGZ77799.1| Pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Neurospora
tetrasperma FGSC 2509]
Length = 1195
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L + ++E ++ S +P KA + V+ + G AI QI L+ E +V+TP
Sbjct: 635 GAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAELKRGA-EIIVATP 693
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
RL+ L++ V+ + + LV+D D + G +++ + +P T++F+
Sbjct: 694 GRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 750
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + +V +S I Q V V + +K + +++L Y
Sbjct: 751 --ATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQIVEVM-DEGKKFNRLLELLGELY 807
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
D + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 808 AD---DDDVRSLIFVERQEKADDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 861
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I + ++++ ++VI D +++YV R +G +F T++
Sbjct: 862 VCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 921
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VPD L ++
Sbjct: 922 NCASGIAKALEQSGQPVPDRLNEM 945
>gi|68464953|ref|XP_723554.1| hypothetical protein CaO19.4870 [Candida albicans SC5314]
gi|74656726|sp|Q5APT8.1|DBP3_CANAL RecName: Full=ATP-dependent RNA helicase DBP3
gi|46445590|gb|EAL04858.1| hypothetical protein CaO19.4870 [Candida albicans SC5314]
Length = 564
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 135/293 (46%), Gaps = 26/293 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G++ V+++ G + D QI +++ +V+TP RL+ L++ AI++ V+ LV+D D
Sbjct: 251 GVNCVAVYGGVSKDDQIRKIKTAN--VVVATPGRLVDLINDGAINLGKVNYLVLDEADRM 308
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL-------LGSINRLSLNQ 391
L KG D ++I + + + T++F N + +G + LS N+
Sbjct: 309 LEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANK 368
Query: 392 SVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD-SKFQNLV 450
+ +++ +N D+EK L IQ+L + + + + K+ S+ +N
Sbjct: 369 RITQ----VVEVINKF--DKEKKL--IQLLRKYNANESSDNKILIFALYKKEASRIENF- 419
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDF 509
LK +S++ + + + + + + ++ D + ++ +VVI F
Sbjct: 420 --LKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTF 477
Query: 510 IISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++++YV + R G H+ FT+D+ +G + IL Q VP+ L
Sbjct: 478 PLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPEEL 530
>gi|336464722|gb|EGO52962.1| hypothetical protein NEUTE1DRAFT_150386 [Neurospora tetrasperma
FGSC 2508]
Length = 1193
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L + ++E ++ S +P KA + V+ + G AI QI L+ E +V+TP
Sbjct: 633 GAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAELKRGA-EIIVATP 691
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
RL+ L++ V+ + + LV+D D + G +++ + +P T++F+
Sbjct: 692 GRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 748
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + +V +S I Q V V + +K + +++L Y
Sbjct: 749 --ATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQIVEVM-DEGKKFNRLLELLGELY 805
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
D + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 806 AD---DDDVRSLIFVERQEKADDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 859
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I + ++++ ++VI D +++YV R +G +F T++
Sbjct: 860 VCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 919
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VPD L ++
Sbjct: 920 NCASGIAKALEQSGQPVPDRLNEM 943
>gi|323355122|gb|EGA86952.1| Dbp3p [Saccharomyces cerevisiae VL3]
Length = 537
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 53/371 (14%)
Query: 228 STIVQIAWIVATAADSIARKEKEG----FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF- 282
+ I +AW + + + G F+F P + L++ Q+K V P +
Sbjct: 136 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELA 195
Query: 283 --------------GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
G+ ++ G D Q L+ + +V+TP RLL L+ ++D+
Sbjct: 196 SQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQ--VVVATPGRLLDLLQEGSVDL 253
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPA 375
S V+ LV+D D L KG D ++IR++ + K T++F T+ + P
Sbjct: 254 SQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPI 313
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ +G+ ++L+ N+ + I++ V+ E K+L+ ++ +HS P K
Sbjct: 314 --KVSIGNTDQLTANKRITQ----IVEVVD-PRGKERKLLELLK--------KYHSGPKK 358
Query: 436 ---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
VL + + LK GY+++ + + + + + ++ D
Sbjct: 359 NEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDV 418
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G H+ FT+ + AG ++ +L
Sbjct: 419 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVL 478
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 479 NGANQPVPEDL 489
>gi|171680181|ref|XP_001905036.1| hypothetical protein [Podospora anserina S mat+]
gi|170939717|emb|CAP64943.1| unnamed protein product [Podospora anserina S mat+]
Length = 1221
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ + P K + V+ + G AI QI L+ E +V+TP
Sbjct: 653 GPIALIMTPTRELCTQIYTDLLPFTKVLKLRAVAAYGGNAIKDQIAELKRGA-EIIVATP 711
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ + LV+D D + G +++ + +P T++F+
Sbjct: 712 GRMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 768
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + +V +S I Q V + + +K ++ +++L Y
Sbjct: 769 --ATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQVVEII-DESKKFVRLLELLGELY 825
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
D + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 826 ADD---DDVRALIFVERQEKTDDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 879
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I + ++++ ++VI D +++YV R +G +F T++
Sbjct: 880 VCPILIATSVAARGLDVKQLKLVINYDVPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 939
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VP+ L ++
Sbjct: 940 NCAPGVAKALEQSGQPVPERLNEM 963
>gi|395815579|ref|XP_003781303.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Otolemur garnettii]
Length = 1031
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 171/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E ++ CK K
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQWSSEEGEG-----PIAVIMTPTRELTLQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|449446676|ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
46-like [Cucumis sativus]
Length = 785
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 30/327 (9%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A +++ K K+ I L+ GA Q+ + R + +V+T
Sbjct: 240 GPTVLVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGLQLRDIDRGVD--IVVAT 297
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTY 370
P RL ++ ++ I + VS LV+D D + IR+ + P T+++
Sbjct: 298 PGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPK 357
Query: 371 TSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDH 423
+LL+ I N ++++ VA++S I Q + A E E+IL+
Sbjct: 358 EVRKIASDLLVNPIQVNIGNVDELVANKS--ITQHIEALAPLEKHRRLEQILR------- 408
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP + I K + ++ + + + ++ V R
Sbjct: 409 ------SQEPGSKVIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGR 462
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
++ D + ++++ VVI DF +++YV + R +GI ++FF + DA
Sbjct: 463 TPVLVATDVAARGLDIKDIRVVINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAK 522
Query: 543 HAGQMIEILEQCGQVVPDALRDLCHTS 569
+A +I+ILE Q VP LRD+ S
Sbjct: 523 YASDLIKILEGANQRVPPELRDMASRS 549
>gi|348511436|ref|XP_003443250.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Oreochromis niloticus]
Length = 627
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 226 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 286 VRQLAEDFLKDYVQINVGALELSANHNILQIVDVCV-ESEKDQKLIQLMEEIMAEKEN-- 342
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V A+ R A +I D
Sbjct: 343 --KTIIFVETKKRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPILIATDV 400
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR T G ++FFT + A ++I +L
Sbjct: 401 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVL 460
Query: 552 EQCGQVV 558
E+ Q +
Sbjct: 461 EEARQAI 467
>gi|213405989|ref|XP_002173766.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
gi|212001813|gb|EEB07473.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
Length = 1056
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 148/328 (45%), Gaps = 31/328 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP KA + + GA I QI L+ E +V TP
Sbjct: 532 GPVAVIMTPTRELAVQIFRECKPFAKALDLRATCAYGGAPIKDQIAELKRGA-EIVVCTP 590
Query: 315 ERLLKLVSLKAIDVSG------VSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ +++ + V+ V L DR+ L + I +I V+F+
Sbjct: 591 GRMIDVLNANSGRVTNLHRCTYVVLDEADRMFDLGFEPQVMRILNNIRPDRQVVLFS--- 647
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ P L + + + +V +S A ++ + S+E K + +++L G
Sbjct: 648 --ATFPRAMEALARKVLKKPIEITVGGRSVVAAEVEQLVEVRSEESKFPRLLELL----G 701
Query: 427 DHFHSEP-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
+ ++++P ++ L V + L+S L +GYS ++ H ++S +D + +
Sbjct: 702 ELYNTQPDVRTLVFVDRHESADALLSQLMKRGYSCNSIHGGKDQHDRDSTISDYK----M 757
Query: 486 SMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ D I+T+ +++ ++V+ D M++YV + R +G+ +F T D
Sbjct: 758 GIFDV-LIATSVAARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFVTPD 816
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCH 567
+ +A + + L+ Q VP L++L +
Sbjct: 817 QSRYAVGIAKALKMSKQPVPLELQNLAN 844
>gi|195453112|ref|XP_002073643.1| GK14214 [Drosophila willistoni]
gi|194169728|gb|EDW84629.1| GK14214 [Drosophila willistoni]
Length = 745
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 162/397 (40%), Gaps = 42/397 (10%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET-SGSSSTIVQIAWIVATAADSIARKE 248
+R G ++ P+ W I S+ I +T SG + + A + + R +
Sbjct: 319 IRRQGYKEPTPIQAQGWPIAM--SGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGD 376
Query: 249 KEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGL-R 303
GP L L ++E A +++ V FG + + GA Q+ L R
Sbjct: 377 -------GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQMRDLQR 426
Query: 304 SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTV 362
CE +++TP RL+ +S + ++ + LV+D D + IR+ +S +P
Sbjct: 427 GCE--IVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 484
Query: 363 VFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEKILKGIQ 419
T+ V + LG+ ++++ S + I Q V VC S E+K+
Sbjct: 485 TLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVEVCDEFSKEDKLKS--- 541
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IKNSVEAD 478
+L Y P K++ V + NLV ++ S G C H K+ E D
Sbjct: 542 LLSDIYDTS--ENPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDKSQSERD 593
Query: 479 GRKRPAVSMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGIL 532
R S ++T +++ + VI D+ + ++Y+ + R G
Sbjct: 594 FVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTS 653
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+FFTK++A A ++++L + Q + AL +L S
Sbjct: 654 FAFFTKNNAKQAKALVDVLREANQEINPALENLARNS 690
>gi|358400668|gb|EHK49994.1| hypothetical protein TRIATDRAFT_161675, partial [Trichoderma
atroviride IMI 206040]
Length = 1258
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 145/326 (44%), Gaps = 31/326 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK + V + GA I QI L+ E +V TP
Sbjct: 699 GPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIRDQIAELKRGA-EIIVCTP 757
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 758 GRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFS--- 814
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYG 426
++P + + L + + + +V +S + + EE K ++ +++L Y
Sbjct: 815 --ATMPRLIDSLTKKVLKSPIEITVGGRSVVAKEIEQIVEIREESTKFVRVLELLGELYD 872
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR----K 481
E + L V + K +L+ L KGY C+ H K+ V+ D K
Sbjct: 873 ---KDEDARSLLFVERQEKADDLLKELMQKGYP------CMSIHGGKDQVDRDSTISDFK 923
Query: 482 RPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
+ V ++ ++ L+ + ++VI D +++YV R +G +F T +
Sbjct: 924 KGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTPE 983
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ Q VP+ L ++
Sbjct: 984 QENCAPGIAKALEQSDQPVPERLNEM 1009
>gi|294867179|ref|XP_002764990.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239864870|gb|EEQ97707.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 580
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 161/376 (42%), Gaps = 40/376 (10%)
Query: 208 IEFWKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSS 265
++ W SS +D++ +GS T+ A+++ A+ E E GP L LV +
Sbjct: 211 MQGWPVASSGRDLVGVAETGSGKTL---AYLMPAIVHIAAQPEVE--QGDGPVALVLVPT 265
Query: 266 QEKAAKV--RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL 323
+E + ++ S+ + + + + ++ G Q L + PE LV+TP RL+ +
Sbjct: 266 RELSQQLLAESMLQ-IGSVPLRIACVYGGQPKRQQERELWTA-PELLVATPGRLIDFLQN 323
Query: 324 KAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL 380
A ++ V+ LV+D D +L G L I +I T+++ + T +Q+L
Sbjct: 324 GATNLKRVTYLVIDEADEMLALGFGRQLDSICSAIRPDRQTLMW----SATWPREIQDLA 379
Query: 381 LGSINRLSLNQSVASQS-ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH----SEPLK 435
+ ++ ++ SQS A Q E +K + +D+ ++ + K
Sbjct: 380 RKHCREMPVHINIGSQSLAACHQVTQDFVFLEHPGMKQKEFMDNVIPKVWNVLESNGEAK 439
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS---------VEADGRKRPAVS 486
L + L L+ +GY+ + CI S + S + D R A +
Sbjct: 440 ALIFCNTKREVDQLTQLLRSQGYN----AVCIHSDKEQSEREWVFAQYRDGDVRLLVATN 495
Query: 487 MIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
++ + +++ + VI D +++ YV + AR G + FT + HA
Sbjct: 496 LMGR----GVDIKNIQFVINYDMPQNVEEYVHRIGRTARAGAHGTSITLFTAQEGRHAKD 551
Query: 547 MIEILEQCGQVVPDAL 562
+++IL + GQ +P+ L
Sbjct: 552 LVDILNEAGQNIPEFL 567
>gi|414591850|tpg|DAA42421.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 1298
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 52/335 (15%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCE--PEFLVS 312
GP +L L ++E A+++++ V K ++ + L+ G + ++ LR E + +V+
Sbjct: 672 GPTVLVLAPTRELASQIQAEVVKFGQSSRVSCTCLYGGTS---KVPQLRELERGADIVVA 728
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLT 369
TP RL ++ +K I++ VSLLV+D D + IR+ + P T+++
Sbjct: 729 TPGRLNDILEMKRINLHQVSLLVLDEADRMLDMGFEPQIRKIVDELPNARQTLMYTATWP 788
Query: 370 YTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVL 421
+LL +GSI+ L N+S I Q V V D+++ L+ Q+L
Sbjct: 789 KEVTKIAGDLLRDPVQVNIGSIDELVANKS-------ITQYVEVVPPMDKQRRLE--QIL 839
Query: 422 DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI---KNSVEA 477
GD + SK ST K C + G N I K+ E
Sbjct: 840 ----GDQ------------ERGSKIIIFCSTKKMCDQLARGIGRNFNAVSIHGDKSQAER 883
Query: 478 DG-----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
D R A ++ D + ++++ VVI DF +++YV + R +G+
Sbjct: 884 DNVLNQFRTGRASVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGV 943
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
++FF++ D +A ++++L+ Q+VP L+D+
Sbjct: 944 SYTFFSEQDWKYACDLVKLLQGANQLVPPQLQDMA 978
>gi|334187683|ref|NP_001190309.1| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
gi|114153757|sp|Q9LYJ9.2|RH46_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 46
gi|332004672|gb|AED92055.1| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
Length = 645
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 142/338 (42%), Gaps = 52/338 (15%)
Query: 253 SFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
S GP +L L ++E A +++ K K+ I L+ GA Q+ + + +V
Sbjct: 230 SRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGV-DIVV 288
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RL ++ +K I + VS LV+D D + IR+ ++ P T+++
Sbjct: 289 ATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW 348
Query: 369 TYTSVPAVQNLLL--GSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVL 421
+LL+ +N ++++ VA++S I Q++ V A E E+IL+
Sbjct: 349 PKEVRKIAADLLVNPAQVNIGNVDELVANKS--ITQTIEVLAPMEKHSRLEQILR----- 401
Query: 422 DHAYGDHFHSEPLKVLYIVGK-----DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
EP + I D +NL T + K+ E
Sbjct: 402 --------SQEPGSKIIIFCSTKRMCDQLARNLTRTFGA----------AAIHGDKSQAE 443
Query: 477 AD--------GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTV 528
D GR P + D ++++ VV+ DF +++YV + R
Sbjct: 444 RDDVLNQFRSGRT-PVLVATDV-AARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGA 501
Query: 529 SGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+G+ ++FF DA HA +I+ILE Q VP +R++
Sbjct: 502 TGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMA 539
>gi|383862185|ref|XP_003706564.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Megachile rotundata]
Length = 713
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 158/369 (42%), Gaps = 27/369 (7%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 137 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINNQPRLSRG---DGPIVLILAPTREL 191
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A +++SV + FG I + G+ Q L E ++TP RL+ +
Sbjct: 192 AQQIQSVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKG 247
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 248 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLS 307
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDE-EKILKGI-QVLDHAYGDHFHSEPLKVLYIV 440
++++ + + I Q + +C E E L G+ + + G K++ V
Sbjct: 308 DYIQINIGSLTLAANHNIRQIIEICQEHEKETKLSGLLREIGKDRGG-------KMIIFV 360
Query: 441 GKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELE 499
K ++ +K +G+ + ++ V ++ R + ++ D + ++E
Sbjct: 361 ETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVE 420
Query: 500 EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
+ + VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQV+
Sbjct: 421 DVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQVIN 480
Query: 560 DALRDLCHT 568
L DL ++
Sbjct: 481 PQLADLANS 489
>gi|302786394|ref|XP_002974968.1| hypothetical protein SELMODRAFT_232454 [Selaginella moellendorffii]
gi|300157127|gb|EFJ23753.1| hypothetical protein SELMODRAFT_232454 [Selaginella moellendorffii]
Length = 408
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 167/389 (42%), Gaps = 46/389 (11%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G E+ +P+ +SW +D++ +GS T+ A+ V + K+KE
Sbjct: 6 GFEKPSPIQAHSWPFLL-----DGRDLIGIAATGSGKTL---AFGVPALVHILNHKKKEK 57
Query: 252 FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRS-CEPEF 309
G L L ++E A ++ +V + A G+ V L+ G++ Q + LRS C+
Sbjct: 58 KHSKGSRCLVLSPTRELAQQIAAVLEEAGASCGVKVVCLYGGSSKGPQYSSLRSGCD--I 115
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPH---TVVFND 366
+V+TP RL V + ++ LV+D D + +R +S P T++
Sbjct: 116 VVATPGRLQDFVDEGVCKLDQITYLVLDEADRMLDLGFEPAVRAIVSHIPQERQTIM--- 172
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
L+ T +VQ L I AS + S ++ A+ + + + ++VLD
Sbjct: 173 -LSATWPTSVQKLAQEFIQD-------ASPVKITVGSEDLSANHD--VTQIVEVLDDKSR 222
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLV----STLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
D E L+ LY K ++ V ++ + + G H S +A R +
Sbjct: 223 DRRLQELLR-LYHKTKRNRVLVFVLYKKEAVRVENFLQKQGWKVTGIHGDKSQQA--RNQ 279
Query: 483 PAVSMIDKDH---IST------AELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
+ D H I+T ++ + E VI F ++ ++YV + R G H
Sbjct: 280 ALSAFKDGSHPLLIATDVAARGLDIPDVEFVINYSFPLTTEDYVHRIGRTGRAGKKGTAH 339
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+FFT D A AG+++ IL + Q+VP+ L
Sbjct: 340 TFFTTADKARAGELVNILREARQIVPEEL 368
>gi|384495085|gb|EIE85576.1| hypothetical protein RO3G_10286 [Rhizopus delemar RA 99-880]
Length = 517
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 160/363 (44%), Gaps = 25/363 (6%)
Query: 211 WKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W S +DI+ ET + I +V IA K K G P +L + ++E
Sbjct: 134 WPISLSGRDIVGIAETGSGKTLAFTIPGLV-----HIASKLKRGKKNGKPSMLVVSPTRE 188
Query: 268 KAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
A + + KA G+ ++ ++ G Q + + +V+TP RL+ L++
Sbjct: 189 LAMQSAEQAETAGKAVGVKSICVYGGVDKQPQRRAFQQGV-DIVVATPGRLIDLINEGVC 247
Query: 327 DVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNLLLGS 383
D+S VS +V+D D + + IR + P T++F+ S+ + + L +
Sbjct: 248 DLSEVSFMVLDEADRMLDDGFENDIRSIMGYSPKDRQTLMFSATWP-ESIRKLASDFLNN 306
Query: 384 INRLSLNQSVASQSACIIQSVNVCAS--DEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
R+++ + S I Q V V + D+E++L + +L + S +VL
Sbjct: 307 PMRVTIGSPDLAASQNIQQIVQVVQNPRDKERLL--VDLLKKIH----KSRKNRVLIFAL 360
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE-- 499
+ + +L+ GY + G + + + + + K + ++ ++ L+
Sbjct: 361 YKKEAMRVEKSLEYHGYKV-IGIHGDKNQAQRTEALNSFKDGSYPLMIATDVAARGLDIP 419
Query: 500 EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
+ E V+ F ++++ Y+ + R G ++FFT +D AH+G++I +L+Q VP
Sbjct: 420 DVEYVVNLTFPLTIEAYIHRIGRTGRGGKKGTAYTFFTPEDKAHSGELINVLKQANMNVP 479
Query: 560 DAL 562
D L
Sbjct: 480 DEL 482
>gi|347970348|ref|XP_313440.5| AGAP003663-PA [Anopheles gambiae str. PEST]
gi|333468891|gb|EAA44671.5| AGAP003663-PA [Anopheles gambiae str. PEST]
Length = 677
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 143/337 (42%), Gaps = 31/337 (9%)
Query: 248 EKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLR 303
+K S GP +L L ++E A +++ V FG I L G++ Q + LR
Sbjct: 279 QKPDPSVRGPLVLVLAPTRELAQQIQQVAT---EFGSSSYIRNTCLFGGSSKGPQASDLR 335
Query: 304 SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTV 362
E +++TP RL+ + + V+ LV+D D + IR+ + +P
Sbjct: 336 RGV-EIVIATPGRLIDFLESGTTTLQRVTYLVLDEADRMLDMGFEPQIRKILDHVRPDRQ 394
Query: 363 VFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ 419
+ T+ VQ L LG ++++ S + I Q V V A ++ G +
Sbjct: 395 ILMWSATWPK--EVQRLARDFLGDYVQINVGSLELSANHNITQHVRVIAEKDKNPELG-K 451
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE--- 476
+L+ Y + P K+L + + +K GY + + H S +
Sbjct: 452 LLEELYHE---GNPGKILIFTTTKRQCDRISMQIKRYGY------DSVSMHGDKSQQERE 502
Query: 477 -ADGRKRPAVS--MIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGIL 532
A GR R + S ++ D + +++ +VVI D+ ++YV + R +G+
Sbjct: 503 RALGRFRNSSSCILVATDVAARGLDVDGIKVVINYDYPQQTEDYVHRIGRTGRSNATGVA 562
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
++FFT + A +++ IL++ Q +P L T+
Sbjct: 563 YTFFTMAERKQARELVNILQEAKQDIPSELLRWSQTA 599
>gi|340378427|ref|XP_003387729.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Amphimedon queenslandica]
Length = 1111
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 144/322 (44%), Gaps = 26/322 (8%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L ++E A ++ R CKPLK + TV ++ G+ + QI L+ E +V
Sbjct: 509 GPISLIFAPTRELAIQIYNECRKFCKPLK---LRTVCVYGGSGVSEQIADLKRG-AEIVV 564
Query: 312 STPERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFN 365
TP R++ ++ S + ++ ++ LV+D D + G +++ + +P TV+F+
Sbjct: 565 CTPGRMIDVLAANSGRVTNLRRLTYLVLDEADRMFDMGFEPQVMKIINNTRPDRQTVMFS 624
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ +L I +SV + + Q+V V S++ K LK +++L
Sbjct: 625 ATFPRQMEALARKILTQPIEVQVGGRSVVCKD--VEQTVVVLESNQ-KFLKLLELL---- 677
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
+ E VL V + L+ L Y+ + ++SV +D R A+
Sbjct: 678 --GVYQEQGSVLVFVERQETADGLIKDLMKASYTCMALHGGMDQSDRDSVISDFRSG-AM 734
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ ++ L+ ++++V ++ ++YV R G +F T D +
Sbjct: 735 PLLIATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGRKGFAFTFITPDQSRL 794
Query: 544 AGQMIEILEQCGQVVPDALRDL 565
+G++++ LE G VP+ L ++
Sbjct: 795 SGEILKALELSGAAVPEELAEM 816
>gi|409079813|gb|EKM80174.1| hypothetical protein AGABI1DRAFT_57683 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 864
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 42/372 (11%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +D++ +GS TI + + D ++ EG P + + ++E A ++
Sbjct: 235 SGRDVIGVAKTGSGKTIAFLMPLFRHIKDQRPLEQMEG-----PIAVVMTPTRELAVQIH 289
Query: 274 SVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVS 329
CKP LK G+ V + G+ I QI L+ E +V TP R++ L+ S + ++
Sbjct: 290 KDCKPFLKVLGLRAVCAYGGSPIKDQIAELKKGA-EIIVCTPGRMIDLLTANSGRVTNLK 348
Query: 330 GVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINR 386
V+ +V+D D + G +++ + +P TV+F+ + P + L I R
Sbjct: 349 RVTYVVLDEADRMFDMGFEPQVMKIVNNTRPDRQTVLFS-----ATFPKQMDSLARKILR 403
Query: 387 LSLNQSVASQS---ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEP-LKVLYIVGK 442
L +V +S A I Q V V A D K + +++L G ++ +P + L V +
Sbjct: 404 KPLEITVGGRSVVAAEIEQIVEVRAEDT-KFNRLLEIL----GQMYNEDPECRTLIFVDR 458
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR----KRPAVSMIDKDHISTAE 497
NL+ L KGY C+ H K+ V+ D K V ++ ++
Sbjct: 459 QEAADNLLRELMRKGYL------CMSLHGGKDQVDRDQTIADFKSGVVPIVIATSVAARG 512
Query: 498 LE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCG 555
L+ + ++VI D M++YV R G +F T + ++ + L+
Sbjct: 513 LDVKQLKLVINHDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQDRYSVDIHRALKASN 572
Query: 556 QVVPDALRDLCH 567
+P L DL +
Sbjct: 573 ASIPQELEDLAN 584
>gi|395815581|ref|XP_003781304.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Otolemur garnettii]
Length = 872
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 171/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 205 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 256
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E ++ CK K
Sbjct: 257 AKTGSGKTIAFLLPMFRHIMDQWSSEEGEG-----PIAVIMTPTRELTLQITKECKKFSK 311
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 312 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 370
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 371 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 425
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 426 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 477
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 478 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 536
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 537 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 593
>gi|325296847|ref|NP_001191665.1| ATP-dependent RNA helicase DDX5 [Aplysia californica]
gi|304441889|gb|ADM34180.1| ATP-dependent RNA helicase DDX5 [Aplysia californica]
Length = 600
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 10/318 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L LV ++E A +V V +A + T ++ GA Q+ L E ++TP
Sbjct: 178 GPIVLVLVPTRELAQQVLEVSNEFGRASQLKTACVYGGAPKGPQLRDLERGA-EICIATP 236
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 237 GRLIDFLEAGKTNLRRTTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKE 296
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ + + I+Q ++VC D EK K +++L+ +
Sbjct: 297 VRRLAEEFLNDYIQVNIGALQLTANHNILQIIDVCM-DHEKEEKLVKLLNEI----MQEK 351
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K L V K ++ +K G+ + + ++ D R ++ D
Sbjct: 352 ENKTLIFVETKRKADDIARRMKRDGWPVLSIHGDKSQQERDWALNDFRNGRNPILVATDV 411
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ ++YV + R T +G ++FFT +A A ++ +L
Sbjct: 412 ASRGLDVEDIKFVINFDYPNCSEDYVHRIGRTGRSTNTGTAYTFFTPGNAKQASDLVNVL 471
Query: 552 EQCGQVVPDALRDLCHTS 569
+ QV+ L L S
Sbjct: 472 REAKQVISPKLLQLEENS 489
>gi|262376303|ref|ZP_06069533.1| ATP-dependent RNA helicase rhlB [Acinetobacter lwoffii SH145]
gi|262308904|gb|EEY90037.1| ATP-dependent RNA helicase rhlB [Acinetobacter lwoffii SH145]
Length = 383
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 24/312 (7%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ S + L + G++ V+L G D Q L + +V+TP
Sbjct: 79 PRALILAPTRELALQIESDAQDLAKYAGLNVVTLLGGVDFDKQKNQLNKAPVDIMVATPG 138
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFNDCLTY 370
RL+ V K + + + LV+D D L + +++ + P T++F+ +Y
Sbjct: 139 RLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMFSATFSY 198
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
+ Q L + + + + + + V +D+ K+L+ I
Sbjct: 199 DVLNLAQQWLFEPVT-VEIEPEKKTNADVEQRVYMVAKADKYKLLQEI----------LR 247
Query: 431 SEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
EP+ KV+ + + + L LK GY + S I + + + MI
Sbjct: 248 DEPIEKVMIFANRRDQVRKLYDHLKRDGYKVVMLSGEIAQDKRLKMLDQFKNGKHNIMIA 307
Query: 490 KDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D ++ + V V +F + + +YV + R SG+ SF +DDA + +
Sbjct: 308 TD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTSGVSISFLAEDDAFY---L 363
Query: 548 IEILEQCGQVVP 559
EI + GQ +P
Sbjct: 364 PEIEKAIGQKLP 375
>gi|195144578|ref|XP_002013273.1| GL23489 [Drosophila persimilis]
gi|194102216|gb|EDW24259.1| GL23489 [Drosophila persimilis]
Length = 649
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 163/403 (40%), Gaps = 46/403 (11%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI-LETSGSSSTIVQI--AWIVATAAD 242
+ +R G ++ P+ W I S A + + +GS T+ I A +
Sbjct: 216 VTKEIRRQGYKEPTPIQAQGWPI----AMSGANFVGIAKTGSGKTLGYILPAIVHINNQQ 271
Query: 243 SIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQ 298
+ R + GP L L ++E A +++ V FG + + GA Q
Sbjct: 272 PLQRGD-------GPIALVLAPTRELAQQIQQVAT---EFGSSSYVRNTCVFGGAPKGGQ 321
Query: 299 ITGL-RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG 357
+ L R CE +++TP RL+ +S ++ + LV+D D + IR+ +S
Sbjct: 322 MRDLQRGCE--IVIATPGRLIDFLSSGGTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQ 379
Query: 358 -KPHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC--ASDEEK 413
+P T+ V + LG+ ++++ S + I Q V VC S EEK
Sbjct: 380 IRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVEVCDEFSKEEK 439
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-IK 472
+ +L Y P K++ V + NLV ++ S G C H K
Sbjct: 440 LKS---LLSDIYDTS--ENPGKIIIFVETKRRVDNLVRFIR------SFGVRCGAIHGDK 488
Query: 473 NSVEADGRKRPAVSMIDKDHIST------AELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+ E D R S ++T +++ + VI D+ + ++Y+ + R
Sbjct: 489 SQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRS 548
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
G +FFTK++A A ++++L + Q + AL +L S
Sbjct: 549 NTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNS 591
>gi|307105200|gb|EFN53450.1| hypothetical protein CHLNCDRAFT_36420 [Chlorella variabilis]
Length = 421
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 246 RKEKEGFSFTG--PFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGL 302
R + E TG P L + ++E A ++ +V + + GI TV ++ G Q+ L
Sbjct: 66 RAQSEAGVATGKKPVALVIAPTRELALQICAVLEEAGSQCGISTVCVYGGVPKREQVAAL 125
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTV 362
R +V+TP RL L+ A + VS LV+D D + IR +I+GK
Sbjct: 126 RKGA-AIVVATPGRLEDLLEDGACRLDEVSYLVLDEADRMLDLGFEPHIR-AIAGKTRAD 183
Query: 363 VFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ 419
+ T PA++ L L R+++ + S + Q + V E++ G
Sbjct: 184 RQTLMFSATWPPAIRKLASEFLCHPVRVTIGSQDLAASHSVTQVIEVI---EDRARDGRL 240
Query: 420 VLDHAYGDHFH-SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD 478
H +H S +V+ V + + L+ KG+ + + +S ++ S +
Sbjct: 241 ---HELLQRYHASRSNRVIIFVLYKKEAVRVEQLLQRKGWK-AAAIHGDISQVQRSSAVE 296
Query: 479 GRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
K AV ++ ++ L+ + E V+ F ++ ++YV + R +G H+FF
Sbjct: 297 QFKSGAVPLLVATDVAARGLDIPDVEAVLNYSFPLTTEDYVHRIGRTGRAGKTGKAHTFF 356
Query: 537 T-KDDAAHAGQMIEILEQCGQVVPDAL 562
+D AG++I +L + Q VP+ L
Sbjct: 357 VGNNDKPRAGELINVLREAKQTVPEEL 383
>gi|449515569|ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
sativus]
Length = 778
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 30/327 (9%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A +++ K K+ I L+ GA Q+ + R + +V+T
Sbjct: 233 GPTVLVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGLQLRDIDRGVD--IVVAT 290
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTY 370
P RL ++ ++ I + VS LV+D D + IR+ + P T+++
Sbjct: 291 PGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPK 350
Query: 371 TSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDH 423
+LL+ I N ++++ VA++S I Q + A E E+IL+
Sbjct: 351 EVRKIASDLLVNPIQVNIGNVDELVANKS--ITQHIEALAPLEKHRRLEQILR------- 401
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP + I K + ++ + + + ++ V R
Sbjct: 402 ------SQEPGSKVIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGR 455
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
++ D + ++++ VVI DF +++YV + R +GI ++FF + DA
Sbjct: 456 TPVLVATDVAARGLDIKDIRVVINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAK 515
Query: 543 HAGQMIEILEQCGQVVPDALRDLCHTS 569
+A +I+ILE Q VP LRD+ S
Sbjct: 516 YASDLIKILEGANQRVPPELRDMASRS 542
>gi|443899361|dbj|GAC76692.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 563
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 26/298 (8%)
Query: 280 KAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDR 338
K+ GI + L+ G + Q+ L ++ +V TP R+L + ++D+S V+ LV+D
Sbjct: 242 KSMGIGMICLYGGVSKQEQVRLLNQTPTVRIVVGTPGRVLDMARDGSLDLSNVTYLVLDE 301
Query: 339 LDS-LSKG---DTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSIN---RLSL 389
D L KG D ++I QS HT +F + T PAV+ L +N R+++
Sbjct: 302 ADRMLDKGFEPDIRAIIGMCQSREQGRHTSMF----SATWPPAVRGLAESFMNGPVRVTV 357
Query: 390 NQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNL 449
S + + Q+V V A K + L + K+L + Q +
Sbjct: 358 GSDELSANRRVEQTVEVLADGYAKERRLNDFLRSVNAQRSND---KILIFALYKKEAQRI 414
Query: 450 VSTLKCKGYSIS-----TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVV 504
TL+ G+ +S G N ++ ++ A+ A + + ++ E V
Sbjct: 415 EQTLRRGGFKVSGIHGDLGQNERIASLERFKTAETPLLVATDVAARG----LDIPNVEHV 470
Query: 505 IVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
I F +++++YV + R +G +FFT+ D AHAG++I +L+ Q VP+ L
Sbjct: 471 INYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTEMDKAHAGELIRVLKDADQKVPEDL 528
>gi|403216375|emb|CCK70872.1| hypothetical protein KNAG_0F02050 [Kazachstania naganishii CBS
8797]
Length = 533
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 160/371 (43%), Gaps = 42/371 (11%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S KD++ +GS T+ A+ V A + I K + +G L + ++E
Sbjct: 152 WPYLLSGKDVIGVAETGSGKTL---AFGVP-AVNHIIETSK---TVSGIQALIISPTREL 204
Query: 269 AAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A+++ PL G+ ++ G D Q LR C +V+TP RLL L+ +++
Sbjct: 205 ASQIYDNLIPLTDKVGLECCCVYGGVPKDEQRMKLRKCH--IVVATPGRLLDLLQEGSVN 262
Query: 328 VSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVP 374
+S V+ LV+D D L KG D ++IR++ T++F T+ + P
Sbjct: 263 LSKVNYLVLDEADRMLEKGFEEDIKNIIRETAPHGRQTLMFTATWPKEVRELAATFMNQP 322
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGDHFHSE 432
+ +G+ + LS N+ + I++ V + D + +LK Q A D
Sbjct: 323 V--KVSIGNRDELSANKRIKQ----IVEVVEQRSKDRKLLDLLKKYQ--SGAKKDE---- 370
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
KVL + + LK GY++ + + + + + ++ D
Sbjct: 371 --KVLIFALYKKEAARVERNLKYNGYNVVAIHGDLTQQQRTHALNEFKTGSSNLLLATDV 428
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++ + VI F +++++YV + R +G+ H+ FT++ AG ++ +L
Sbjct: 429 AARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGVAHTLFTEEAKHLAGGLVNVL 488
Query: 552 EQCGQVVPDAL 562
Q VP+ L
Sbjct: 489 NGANQPVPEDL 499
>gi|343428420|emb|CBQ71950.1| probable DBP3-putative RNA helicase required for pre-rRNA
processing [Sporisorium reilianum SRZ2]
Length = 589
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 28/305 (9%)
Query: 280 KAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDR 338
K+ GI + L+ G + Q+ L ++ +V TP R+L + ++D+SGV+ LV+D
Sbjct: 269 KSMGIGMICLYGGVSKQEQVRLLNQTPTVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDE 328
Query: 339 LDS-LSKG---DTLSLI---RQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSIN---RLS 388
D L KG D ++I + G+ HT +F + T PAV+ L +N R++
Sbjct: 329 ADRMLDKGFEPDIRAIIGMCKSRDEGR-HTSMF----SATWPPAVRGLAESFMNGPVRVT 383
Query: 389 LNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQN 448
+ S + + Q+V V A + K ++ D + K+L + Q
Sbjct: 384 VGSDELSANRRVEQTVEVLA---DGYAKERRLNDFLRSVNAQRSKDKILIFALYKKEAQR 440
Query: 449 LVSTLKCKGYSIS-----TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV 503
+ TL+ G+ +S G N ++ ++ A+ P + D ++ E
Sbjct: 441 VEQTLRRGGFKVSGIHGDLGQNERIASLERFKSAE---TPLLVATDV-AARGLDIPNVEH 496
Query: 504 VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
V+ F +++++YV + R +G +FFT D AHAG++I +L+ Q VP+ L
Sbjct: 497 VVNYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTDMDKAHAGELIRVLKDADQKVPEDLT 556
Query: 564 DLCHT 568
T
Sbjct: 557 KFPTT 561
>gi|254585603|ref|XP_002498369.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
gi|238941263|emb|CAR29436.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
Length = 539
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 15/294 (5%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G+ ++ G Q LR+ + +V+TP RLL L++ +++D+S V LV+D D
Sbjct: 226 GLECCCVYGGVPKQEQRNQLRNSQ--VVVATPGRLLDLINEQSVDLSQVQYLVLDEADRM 283
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSL-NQSVASQS 397
L KG D ++I Q+ S T++F V + + + ++S+ N+ S +
Sbjct: 284 LEKGFEEDIKNIINQTNSRDRQTLMFTATWP-KEVRELASTFMRDPVKVSIGNRDELSAN 342
Query: 398 ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD-SKFQNLVSTLKCK 456
I Q V V +K K +++L + + + + K+ S+ +N LK
Sbjct: 343 KRITQIVEVIEP-RQKDRKLLELLRKYQSGAKKDDKVLIFALYKKEASRVEN---NLKYN 398
Query: 457 GYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKN 515
GY ++ + + S D + + ++ D + ++ + VI F +++++
Sbjct: 399 GYDVAAIHGDLSQQQRTSALNDFKAGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVED 458
Query: 516 YVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL-CHT 568
YV + R +G H+ FT ++ AG ++ +L Q VP+ L+ HT
Sbjct: 459 YVHRIGRTGRAGQTGTAHTLFTDNEKHLAGALVNVLNGANQPVPEELKKFGTHT 512
>gi|358332200|dbj|GAA50893.1| ATP-dependent RNA helicase DDX5/DBP2 [Clonorchis sinensis]
Length = 887
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 147/348 (42%), Gaps = 27/348 (7%)
Query: 224 SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAF 282
SG +++ + A + A + R E GP L LV ++E A +V SV + A
Sbjct: 422 SGKTASFIIPAIVHILAQPRLLRGE-------GPICLVLVPTRELAQQVLSVAQQFATAA 474
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ T+ + GA+ Q+ L+ E ++TP RL+ + + +S V+ LV+D D +
Sbjct: 475 GLRTMCFYGGASRGPQLRDLQRGG-EMCIATPGRLIDFIRSEKKLLSRVTYLVLDEADRM 533
Query: 343 SKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSA 398
IR IS +P T+ VQ L L + ++++ +
Sbjct: 534 LDMGFEPQIRTIISNIRPDRQTLMWSATWPR--EVQGLARDFLTNYIQVNIGSVSLHANP 591
Query: 399 CIIQSVNVC-ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKG 457
I Q V + D+E+ L IQ+L F E + L V K + TL+ +G
Sbjct: 592 NITQIVEIIDEWDKEQRL--IQLLTM-----FGRE--RCLVFVETKRKTDQITYTLRRRG 642
Query: 458 YSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNY 516
+++ + R ++ D S ++++ + VI DF ++Y
Sbjct: 643 FAVGAMHGDKQQRDREMTLGSFRDGRLSVLVATDVASRGLDIDDIQYVINFDFPNQTEDY 702
Query: 517 VEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV-PDALR 563
+ + AR G +FFT + A ++IEILE+ Q V P+ R
Sbjct: 703 IHRIGRTARSDKKGTAFTFFTSKNLRQARELIEILEEANQEVNPELFR 750
>gi|322785598|gb|EFZ12253.1| hypothetical protein SINV_05205 [Solenopsis invicta]
Length = 725
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 158/369 (42%), Gaps = 28/369 (7%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ I A + ++R + GP +L L ++
Sbjct: 140 WPIALSGRDLVGIAQTGSGKTLAYILPAIVHINNQPRLSRGD-------GPIVLILAPTR 192
Query: 267 EKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVS 322
E A ++++V + FG I + G+ Q L E ++TP RL+ +
Sbjct: 193 ELAQQIQTVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLE 248
Query: 323 LKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLL 380
++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 249 KGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDF 308
Query: 381 LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIV 440
L ++++ + + I Q + +C + EK K Q+L +E K++ V
Sbjct: 309 LTDYIQINIGSLTLAANHNIRQIIEIC-QEHEKETKLSQLLRE-----IGAERSKMIIFV 362
Query: 441 GKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELE 499
K ++ T+K G+ + ++ V ++ R + ++ D + ++E
Sbjct: 363 ETKKKVDDITKTIKRDGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVE 422
Query: 500 EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
+ + VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ +
Sbjct: 423 DVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELIAVLEEAGQAIN 482
Query: 560 DALRDLCHT 568
L ++ ++
Sbjct: 483 PQLAEMANS 491
>gi|406863554|gb|EKD16601.1| putative ATP-dependent RNA helicase dbp3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 598
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 160/363 (44%), Gaps = 27/363 (7%)
Query: 211 WKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W S +D++ ET + + + A +++ K GP + + ++E
Sbjct: 212 WPFLLSGRDVIGVAETGSGKTMAFAVPCVRGILALPASQRNK------GPRAVIVSPTRE 265
Query: 268 KAAK-VRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
A + + + K G+ V ++ G D Q L++ + +V+TP RL L++
Sbjct: 266 LAMQSYDQIMELAKVSGLKAVCVYGGVPKDQQRQALKTAD--IVVATPGRLNDLINEGCA 323
Query: 327 DVSGVSLLVVDRLDSLSKGDTLSLIRQSIS-----GKPHTVVFNDCLTYTSVPAVQNLLL 381
D+S + +V+D D + IR+ I+ G+ T++F SV A+ + +
Sbjct: 324 DLSKANYVVLDEADRMLDKGFEEEIRKIINMTLPIGQRQTLMFTATWP-ESVRALASTFM 382
Query: 382 GSINRLSLNQSVASQ---SACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLY 438
S ++++ + + I+Q V V +K + +Q+L + + V
Sbjct: 383 TSPVKIAIGDNPTGDLRANTRIVQKVEVM-DGRQKEYRLLQLLKQYQSGAQKDDRILVFA 441
Query: 439 IVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAEL 498
+ K++ L +K KG+ ++ G + +S + + D K+ ++ ++ L
Sbjct: 442 LYKKEAT--RLEGFIKMKGFRVA-GIHGDLSQEQRTRSLDAFKKGTTPILVATDVAARGL 498
Query: 499 E--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
+ ++VI F +++++YV + R + G+ +FFT+ D A +G +I +L+ Q
Sbjct: 499 DIPAVQLVINVTFPLTVEDYVHRIGRTGRAGLDGLAITFFTEQDKALSGSLINVLKAANQ 558
Query: 557 VVP 559
VP
Sbjct: 559 EVP 561
>gi|156375512|ref|XP_001630124.1| predicted protein [Nematostella vectensis]
gi|156217139|gb|EDO38061.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +V+ V + K + + ++ GA QI L E ++TP
Sbjct: 131 GPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGV-EICIATP 189
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ ++ + ++ + LV+D D + IR I +P T+
Sbjct: 190 GRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKE 249
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + + L +++ + + I+Q V+VC D EK K +++L+ G+ +
Sbjct: 250 VQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVC-EDHEKEHKLLKLLEEIMGEKEN-- 306
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K L + L L+ G+ ++ V ++ RK A ++ D
Sbjct: 307 --KTLIFTETKRRADELTRKLRSDGWPAMCIHGDKAQPERDWVLSEFRKGHAPILVATDV 364
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++ + + VI DF ++YV + AR +G ++FFT ++A A +++ +L
Sbjct: 365 ASRGLDISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELVSVL 424
Query: 552 EQCGQVVPDALRDL 565
++ Q V L +L
Sbjct: 425 QEAKQHVNPKLLNL 438
>gi|281207155|gb|EFA81338.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1157
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 139/334 (41%), Gaps = 35/334 (10%)
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSC 305
+ K+G G L + ++E A ++ S CK K G+ ++ GA I QI L+
Sbjct: 579 RPKQGEGMVG---LIMSPTRELALQIYSECKKFSKVLGLRVCCVYGGANIGEQIADLKRG 635
Query: 306 EPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKP 359
+ +V TP R++ ++ + + ++ VS LV+D R+ L G + I ++
Sbjct: 636 A-DIVVCTPGRMIDILCANNKRITNLRRVSFLVLDEADRMFDLGFGPQIMCIIDNVRPDR 694
Query: 360 HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ 419
TV+F+ + + +L+ + ++ +S+ + Q V V S E + + I+
Sbjct: 695 QTVMFSATFPFKVEQVARKILVKPLEIIAGGRSIVCSD--VEQVVEVRPS-ETRYRRLIE 751
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHI 471
+L Y H ++L K NL L GY T + +S
Sbjct: 752 LLATWY----HKG--QILIFTNKQDATDNLFGLLSRAGYQCLSLHGSKDQTDRDETISDF 805
Query: 472 KNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
KN ++ P S ++++ +VI D +++YV + R G
Sbjct: 806 KNKIKTILIATPLAS-------RGLDVKDLNLVINYDCPDHLEDYVHRVGRTGRAGNKGT 858
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++F D+ A +I+ LEQ G VP+ L L
Sbjct: 859 AYTFVLPDEGRFAPSIIKALEQSGAKVPEELTKL 892
>gi|198425852|ref|XP_002130131.1| PREDICTED: similar to p68 RNA helicase isoform 1 [Ciona
intestinalis]
gi|198425854|ref|XP_002130146.1| PREDICTED: similar to p68 RNA helicase isoform 2 [Ciona
intestinalis]
Length = 585
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 26/326 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP L L ++E A +V++V I ++ GA+ QI L R CE +++T
Sbjct: 187 GPIALVLCPTRELAQQVQAVANDYGQLCHIRNTCVYGGASKAPQIRDLERGCE--IVIAT 244
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT- 371
P RL+ + + ++ + LV+D D + IR+ I +P T+
Sbjct: 245 PGRLIDFLEARKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPK 304
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE--EKILKGIQVLDHAYGDHF 429
V + N L + + S + I+Q V+VC DE EK+++ +++ G+
Sbjct: 305 EVQKLANDFLRDNVHIQIGSVNISANHNILQIVDVCTEDEKSEKLMR---LMEEIMGE-- 359
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPA 484
+E +++ K K L ++ G+ + CI K+ E D R +
Sbjct: 360 -AENKTIIFTETK-RKCDILTRNMRRDGWP----AMCIHGD-KSQPERDWVLNEFRTGKS 412
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D S ++ + + VI DF ++Y+ + AR +G ++FFT+ +A
Sbjct: 413 PILVATDVASRGLDVSDIKFVINFDFPNQCEDYIHRIGRTARANQTGTAYTFFTQANAKQ 472
Query: 544 AGQMIEILEQCGQVVPDALRDLCHTS 569
+IEIL++ Q + L +L +S
Sbjct: 473 CKDLIEILKEAKQQINPRLMELAQSS 498
>gi|395534454|ref|XP_003769256.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Sarcophilus
harrisii]
Length = 733
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 39/324 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGA----AIDHQITGLRSCEPEFLV 311
GP +L L ++E A +V S CK GI ++ ++ G I+H G+ + ++
Sbjct: 401 GPGMLVLTPTRELALQVESECKKYTYKGIKSICIYGGGDRRGQIEHVTKGV-----DIVI 455
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTY 370
+TP RL L + I+++ ++ LV+D D L G +++ + +P T+
Sbjct: 456 ATPGRLNDLQMNEFINLNSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTIMTSATW 515
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEKILKGIQVLDHAYGD 427
AV+ L +N + V + + +V + +++EK L H++ D
Sbjct: 516 PD--AVRRLSQKYLND-PMIVYVGTLDLAAVNTVRQKIIITTEQEK-----PALIHSFID 567
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP---- 483
E KV+ VG+ ++ S L KG + + + + E R+R
Sbjct: 568 AMKPED-KVIIFVGRKLIADDISSDLSIKGLPVQS--------LHGNREQSDRERALNEF 618
Query: 484 ---AVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
V ++ +++ L+ ++ V DF +++ YV + R +G + T+
Sbjct: 619 KTGIVRILIATDLASRGLDVLDITHVFNFDFPRNLEEYVHRVGRTGRAGHTGESITLLTR 678
Query: 539 DDAAHAGQMIEILEQCGQVVPDAL 562
+D AG++I ILE+ Q +P+ L
Sbjct: 679 NDWKIAGELINILERANQEIPNEL 702
>gi|168038086|ref|XP_001771533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677260|gb|EDQ63733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 684
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 139/323 (43%), Gaps = 28/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGAAIDHQITGLRSCE--PEFLVS 312
GP +L L ++E A +++ C K ++ I + ++ GA ++ LR E + +++
Sbjct: 222 GPTVLVLAPTRELATQIQDECVKFGRSSRITSTCVYGGAP---KVPQLRDIERGADIVIA 278
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLT 369
TP RL + +K + + VS LV+D D + IR+ ++ P T+++
Sbjct: 279 TPGRLNDFLEVKRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVNEIPSRRQTLMYTATWP 338
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHA 424
+LL+ + N + + I Q+V V E E+IL+
Sbjct: 339 KEVRKIAGDLLINPVQVNIGNTDELAANKSITQNVEVVVPYEKQRRLEQILR-------- 390
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
EP + I + + +S + + + ++ V + R
Sbjct: 391 -----SQEPGSKIIIFCSTKRMCDTLSRNLGRDFGAAAIHGDKSQSERDFVLSQFRTGRT 445
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++++ VV+ DF +++YV + R +G+ ++FF++ D +
Sbjct: 446 PILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFSEQDGKY 505
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
A ++I++LE Q VP L+D+
Sbjct: 506 AKELIKVLEGANQKVPPELKDIA 528
>gi|357528785|sp|Q5AWA6.2|DBP3_EMENI RecName: Full=ATP-dependent RNA helicase dbp3
Length = 488
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 22/290 (7%)
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-L 342
I + G D Q L+S +V+TP RL L + ++D+ V LV+D D L
Sbjct: 175 IQVACIFGGVKKDEQREALKSAA--VVVATPGRLKDLQNDGSLDLGRVKYLVLDEADRML 232
Query: 343 SKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---LLGSINRLSL--NQSVA 394
KG D +I K TV+F T T P V+NL + S +++ + S
Sbjct: 233 DKGFEQDIKDIISPMPVSKRQTVMF----TATWPPIVRNLASTFMTSPVTVTIGGDPSAD 288
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK 454
++ I+ V EK + +Q+L+ H P KVL + + L+
Sbjct: 289 PRANSRIKQVVEVVKPHEKEQRLVQILNR----HQRGTPDKVLAFCLYKKEAMRVERLLR 344
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIIS 512
KG+ ++ G + +S + + K A +++ ++ L+ ++V+ F ++
Sbjct: 345 TKGFKVA-GIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLT 403
Query: 513 MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++YV + R G + FT+ D A +G +I +L+ Q VP+AL
Sbjct: 404 VEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVLKAANQEVPEAL 453
>gi|350418218|ref|XP_003491789.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
impatiens]
Length = 712
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 155/365 (42%), Gaps = 19/365 (5%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 136 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINNQPRLNRG---EGPIVLILAPTREL 190
Query: 269 AAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +++SV + + I + G+ Q L E ++TP RL+ + +
Sbjct: 191 AQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKGTTN 249
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSIN 385
+ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 250 LRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLSDYI 309
Query: 386 RLSLNQSVASQSACIIQSVNVCASDE-EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
++++ + + I Q + +C E E L G L G S K++ V
Sbjct: 310 QINIGSLTLAANHNIRQIIEICQEHEKETKLSG---LLREIGKDRGS---KMIIFVETKK 363
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEV 503
K ++ +K +G+ + ++ V ++ R + ++ D + ++E+ +
Sbjct: 364 KVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVEDVKY 423
Query: 504 VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ + L
Sbjct: 424 VINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQTINPQLA 483
Query: 564 DLCHT 568
DL ++
Sbjct: 484 DLANS 488
>gi|219111853|ref|XP_002177678.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410563|gb|EEC50492.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 595
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 19/312 (6%)
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
+GP L L ++E A ++ VCK + K G + +++ GA + QI L+ + +T
Sbjct: 39 SGPLGLILAPARELAYQIHVVCKNMAKPLGYKSTAVYGGAGVAEQIADLKRGT-HIVTAT 97
Query: 314 PERLLKLVSL---KAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDC 367
P RL+ ++++ K + + V+ +V+ DR+ + +S I ++ TV+F+
Sbjct: 98 PGRLIDILTMQSGKILSLQRVTYVVMDEADRMYDMGFAPQISAILAAVRPDRQTVLFSAT 157
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ L + + +SVAS S + Q D EK L+ +QVL G+
Sbjct: 158 FPKAVESLARKSLQYPVEVMVGGRSVASDS--VTQYAERVEED-EKFLRLLQVL----GE 210
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
KV+ V + NL L GYS + ++S +D +++ ++
Sbjct: 211 QVEGTK-KVIVFVDTQVRADNLFEQLLRNGYSTLSLHGGKEQEDRDSTISDFKRKDGPNV 269
Query: 488 IDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTK-DDAAHA 544
+ ++ L+ V +F ++ YV + R G+ ++F + D+A A
Sbjct: 270 LVATGVAGRGLDVGSCTCVINFSAPNHLEAYVHQVGRTGRAGNRGVAYTFVSSTDEAKFA 329
Query: 545 GQMIEILEQCGQ 556
++ + + GQ
Sbjct: 330 PNVVRAMSEAGQ 341
>gi|403418136|emb|CCM04836.1| predicted protein [Fibroporia radiculosa]
Length = 1002
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 27/326 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP L+ G+ V + G+ I QI ++ E +V TP
Sbjct: 417 GPMAVVMTPTRELAVQIHRECKPFLRVLGLRAVCAYGGSPIKDQIAEMKKG-AEIIVCTP 475
Query: 315 ERLLKLV---SLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ LV+ DR+ + + I +I TV+F+
Sbjct: 476 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS--- 532
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ P + L I R L +V +S A I + ++ K + +++L Y
Sbjct: 533 --ATFPKQMDSLARKILRKPLEITVGGRSVVAAEIDQIVEVREEDSKFNRLLEILGQTYN 590
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
+ S + L V + NL+ L KGY S+ G + + ++S AD K
Sbjct: 591 EDPES---RTLIFVDRQEAADNLLRELMRKGYLCMSLHGGKDQV---DRDSTIAD-FKSG 643
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ + ++VI D M++YV R G +F T +
Sbjct: 644 VVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQD 703
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCH 567
++ + L+ VP L +L +
Sbjct: 704 RYSVDIFRALKASDADVPKELEELAN 729
>gi|224121758|ref|XP_002318665.1| predicted protein [Populus trichocarpa]
gi|222859338|gb|EEE96885.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 28/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP +L L ++E A +++ + LK FG I + ++ GA QI L+ E ++
Sbjct: 193 GPIVLVLAPTRELAVQIQE--EGLK-FGSPANIRSTCIYGGAPKGPQIRDLQRGV-EIVI 248
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ ++ + ++ V+ LV+D D + IR+ IS +P T+
Sbjct: 249 ATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATW 308
Query: 371 T-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
V + L + ++ + + + I Q V V D EK + I++L
Sbjct: 309 PREVEILARQFLHNAYKVIIGSADLKANQSINQVVEVIM-DMEKYNRLIKLLKEVMDGS- 366
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG------RKRP 483
++L + + L+ G+ + + KN E D R
Sbjct: 367 -----RILIFMETKKGCDQVTRQLRMDGWPALS-----IHGDKNQAERDWVLAEFKSGRS 416
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
A+ ++++ + VI DF S+++YV + R G +FFT +A
Sbjct: 417 AIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGARGTAFTFFTDSNAKF 476
Query: 544 AGQMIEILEQCGQVVPDALRDLCH 567
A +I IL++ GQ+VP AL L
Sbjct: 477 ARGLIRILQESGQIVPPALSALAR 500
>gi|357605298|gb|EHJ64546.1| hypothetical protein KGM_21268 [Danaus plexippus]
Length = 985
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 158/384 (41%), Gaps = 32/384 (8%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFS 253
G + P+ W I C + ++GS T+ I + A + K G
Sbjct: 125 GFSKPTPIQAQGWPIALSGCDMVG---IASTGSGKTLSYI--LPAIVHINNQPKSSRG-- 177
Query: 254 FTGPFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
GP L L ++E A +++ VC K IH L GA Q L + E +++
Sbjct: 178 -DGPIALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGV-EIVIA 235
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT 371
TP RLL + ++ + LV+D D + IR+ I +P T+
Sbjct: 236 TPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 295
Query: 372 SVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEK-----ILKGIQVLDH 423
VQ+L L ++++ + + I+Q ++VC E++ +LK I
Sbjct: 296 R--EVQSLAAEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMA--- 350
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
E +++I K + ++ +K G+ + ++ V D R
Sbjct: 351 ------EKENKTIIFIETK-RRVDDITRKMKRDGWPAVCIHGDKSQNERDWVLQDFRSGK 403
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
A ++ D + ++++ + VI D+ + ++YV + R +G ++FFT +AA
Sbjct: 404 APILVATDVAARGLDVDDVKFVINFDYPSNSEDYVHRIGRTGRTNKTGTAYTFFTPSNAA 463
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
A ++ +L++ QVV L++L
Sbjct: 464 KAADLVSVLKEAKQVVNPKLQELA 487
>gi|340717724|ref|XP_003397328.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
terrestris]
Length = 713
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 155/365 (42%), Gaps = 19/365 (5%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 138 WPIALSGRDLVGIAQTGSGKTLAYI--LPATVHINNQPRLNRG---EGPIVLILAPTREL 192
Query: 269 AAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +++SV + + I + G+ Q L E ++TP RL+ + +
Sbjct: 193 AQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLEKGTTN 251
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSIN 385
+ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 252 LRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLSDYI 311
Query: 386 RLSLNQSVASQSACIIQSVNVCASDE-EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
++++ + + I Q + +C E E L G L G S K++ V
Sbjct: 312 QINIGSLTLAANHNIRQIIEICQEHEKETKLSG---LLREIGKDRGS---KMIIFVETKK 365
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEV 503
K ++ +K +G+ + ++ V ++ R + ++ D + ++E+ +
Sbjct: 366 KVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVEDVKY 425
Query: 504 VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
VI D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ + L
Sbjct: 426 VINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQTINPQLA 485
Query: 564 DLCHT 568
DL ++
Sbjct: 486 DLANS 490
>gi|308813391|ref|XP_003084002.1| putative RNA helicase, DRH1 (ISS) [Ostreococcus tauri]
gi|116055884|emb|CAL57969.1| putative RNA helicase, DRH1 (ISS) [Ostreococcus tauri]
Length = 1118
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 169/412 (41%), Gaps = 52/412 (12%)
Query: 185 AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSST----IVQIAWIVA 238
A+ A++ G + P+ +W I KD+ + +GS T + +A IVA
Sbjct: 96 ALRKALKAQGYDAPTPIQAEAWPILL-----KGKDVVAIAKTGSGKTCGFLLPALAKIVA 150
Query: 239 TAADSIARKE-KEGFSFTG---PFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGA 293
+ +G G P ++ L ++E A ++ C K A G + L+ GA
Sbjct: 151 EGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRELAIQIHDECAKFCPAAGCRSAVLYGGA 210
Query: 294 AIDHQITGLRSCEPEFLVSTPERLLKLVS--------LKAIDVSGVSLLVVDRLDSLSKG 345
A Q+ LRS + +V+TP RL + + A+ + V L DR+ +
Sbjct: 211 AKGDQLRALRSGA-DVVVATPGRLNDFLEPPPGFTAPVSAVKAAYVVLDEADRMLDMGFE 269
Query: 346 DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPAVQNLLLGSI-NRLSLNQSVAS 395
+ I + TV+F +T+ P ++ +GS ++L+ N+S
Sbjct: 270 PQIKKIFKLCPSARQTVMFTATWPKGVQKIADAFTTKPI--HIQIGSGGDKLTANKS--- 324
Query: 396 QSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKC 455
I +EEK + + +L G + + G + L LK
Sbjct: 325 -----ITQTVEVVEEEEKFDRCVAILKKELGKN-----ETCIMFAGTKRRCDFLDRRLKQ 374
Query: 456 KGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISM 513
G+S + + + + D +R +++ ++ L+ V VIV DF + +
Sbjct: 375 VGFSSAGSIHGDKDQYEREMVLDNFRRGRGNILVATDVAARGLDIPGVAAVIVYDFPLQV 434
Query: 514 KNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV + R G +FFTKD+ A ++IEIL+ GQ VP AL+ +
Sbjct: 435 EDYVHRIGRTGRAGKDGKAFTFFTKDNRGAANELIEILQGAGQTVPLALQAM 486
>gi|356558103|ref|XP_003547347.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Glycine
max]
Length = 1188
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 58/345 (16%)
Query: 253 SFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
S GP +L L ++E A +++ V K ++ + L+ GA Q+ L + +V
Sbjct: 585 SLNGPTVLVLAPTRELATQIQDEVVKFGRSSRVSCTCLYGGAPKALQLKELDRGA-DIVV 643
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
+TP RL ++ +K ID VSLLV+D R+ + + I I + T+++
Sbjct: 644 ATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATW 703
Query: 369 TYTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILK 416
+LL +GS++ L+ N+ I Q V V E E+IL+
Sbjct: 704 PKEVRKIASDLLVNPVQVNIGSVDELAANK-------AITQYVEVVPQMEKQRRLEQILR 756
Query: 417 GIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHIKNSV 475
+ + SK ST + C + S G + I
Sbjct: 757 SQE----------------------RGSKVIIFCSTKRLCDQLARSIGRTFGAAAIHGD- 793
Query: 476 EADGRKRPAVSMI--DKDHISTA--------ELEEYEVVIVPDFIISMKNYVEILTSMAR 525
++ G + +S K I A ++++ VVI DF +++YV + R
Sbjct: 794 KSQGERDWVLSQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGR 853
Query: 526 HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTSP 570
+G+ ++FF++ D HAG +I++LE Q V LR + P
Sbjct: 854 AGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMALRGP 898
>gi|303279012|ref|XP_003058799.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459959|gb|EEH57254.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 485
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 131/326 (40%), Gaps = 22/326 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++++ A I + ++ GA Q++ LR E +TP
Sbjct: 133 GPIALVLAPTRELAVQIQAEAAIFGASSKIKSACVYGGAPKGPQVSALRDGV-EICAATP 191
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + +A+ + V+ V+D D + IR+ I T++F
Sbjct: 192 GRLIDFIETRAVSLRRVTYFVLDEADRMLDMGFEPQIRKISDRIRPDRQTLLFTATWP-K 250
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY------ 425
V V L + + + + I QSV+V DE K K + +L+
Sbjct: 251 EVEGVAADFLHDPVTVRVGDASLKANVNIAQSVDVMDEDE-KYGKLVSLLERQLDGGGKS 309
Query: 426 ---GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
++ + P +++ + +K + L+ G+ + + V + R
Sbjct: 310 AEDAEYAAASPRRIIVFLASKAKVDAVTRRLRTDGFPALSIHGDKSQEEREWVLGEFRAG 369
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEI-----LTSMARHTVSGILHSFF 536
+ M+ D + ++++ VI DF S +Y+ + + R G HSFF
Sbjct: 370 TSPVMLATDVAARGLDVKDVRCVINHDFPSSGASYLTLDYVHRVGRTGRAGARGEAHSFF 429
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDAL 562
T DA HA + +L G VPDAL
Sbjct: 430 TSADARHAKALCALLRDGGCAVPDAL 455
>gi|145323964|ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|332191920|gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 828
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 36/328 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S + K K GI V ++ G+ + QI+ L+ E +V TP
Sbjct: 264 GPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGT-EIVVCTP 322
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ S K ++ V+ LV+D R+ + ++ I Q+I + TV+F+
Sbjct: 323 GRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATF 382
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L + +SV ++ I Q V V + ++ L+ +++L
Sbjct: 383 PRQVETLARKVLNKPVEIQVGGRSVVNKD--ITQLVEV-RPESDRFLRLLELLGE----- 434
Query: 429 FHSEPLKVLYIVGK----DSKFQNLVST----LKCKGYSISTGSNCIVSHIKNSVEADGR 480
SE K+L V D+ +++++ + L G T +S KN V
Sbjct: 435 -WSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDV----- 488
Query: 481 KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+++ ++ L+ E E+V+ D ++YV + R G +F ++
Sbjct: 489 ----CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 544
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
DDA +A +++ LE Q VPD L+ L
Sbjct: 545 DDAKYAPDLVKALELSEQPVPDDLKALA 572
>gi|17537549|ref|NP_496973.1| Protein Y54G11A.3 [Caenorhabditis elegans]
gi|4008449|emb|CAA22456.1| Protein Y54G11A.3 [Caenorhabditis elegans]
Length = 504
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 166/391 (42%), Gaps = 27/391 (6%)
Query: 185 AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAAD 242
+I +R +G E+ +P+ + W S +D + S GS T+ + +
Sbjct: 94 SIMGEIRKNGFEKPSPI-----QSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDA 148
Query: 243 SIARKEK-EGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITG 301
+A+ EK + PF+L L ++E A ++ K G +V L+ G + Q+
Sbjct: 149 QLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRPEQVEA 208
Query: 302 LRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPH 360
R E +++TP RL L + I ++ V+ +V+D D L G +++ R +P
Sbjct: 209 CRGGV-EIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPD 267
Query: 361 TVVFNDCLTYTSVPAVQNLLLGSINR---LSLNQSVASQSA-CIIQSVNVCASDEE--KI 414
+V LT + P L + +++N S+ S + Q D ++
Sbjct: 268 RLV---ALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRV 324
Query: 415 LKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNS 474
+ + L A+G ++ K++ V +L S KG + S G + S
Sbjct: 325 CEIVNFLTAAHGQNY-----KMIIFVKSKVMADHLSSDFCMKGIN-SQGLHGGRSQSDRE 378
Query: 475 VEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGIL 532
+ + + V ++ +++ ++ ++ V+ DF + ++ YV + R G
Sbjct: 379 MSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEA 438
Query: 533 HSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
SF +D ++ +I+ILE+ Q VPD LR
Sbjct: 439 MSFLWWNDRSNFEGLIQILEKSEQEVPDQLR 469
>gi|341895800|gb|EGT51735.1| hypothetical protein CAEBREN_29261 [Caenorhabditis brenneri]
Length = 586
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 156/383 (40%), Gaps = 36/383 (9%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +DI+ +GS T+ + + R+ EG P +L L+ ++E
Sbjct: 167 WPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQPHRQRGEG-----PSVLVLLPTREL 221
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +V+ V + G+ L GA+ Q L + V+TP RLL + +
Sbjct: 222 AQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGV-DIAVATPGRLLDFLDNGTTN 280
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYTSVPAVQNLLLGSI 384
+ S LV+D D + IR+ I +P T++F+ V ++ +
Sbjct: 281 MKRCSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMFSATWP-KEVRSLASDFQKDA 339
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
L++ + + I Q V+V + K K +++L+H + + K + V
Sbjct: 340 AFLNVGSLELAANHNITQVVHVL-EEHAKTAKLMELLNHI----MNQKDCKTIIFVETKR 394
Query: 445 KFQNLVSTLKCKGYSI-------STGSNCIVSHIKNSVEAD-----------GRKRPAVS 486
K L T++ G+ + G V +++ D K P +
Sbjct: 395 KADELTRTMRRDGWPTLCIHGDKNQGERDWVLQGLFTIQTDVYLILFFSEFKAGKTPIML 454
Query: 487 MIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
D +++ + VI D+ + ++YV + R G ++FFT +AA A
Sbjct: 455 ATDVAARDWVHVDDIKFVINYDYPNNSEDYVHRIGRTGRRDQKGTAYTFFTHTNAAKAKD 514
Query: 547 MIEILEQCGQVVPDALRDLCHTS 569
++++L++ Q VP ALRD+ + S
Sbjct: 515 LLKVLDEAKQEVPQALRDMGNRS 537
>gi|392572621|gb|EIW65766.1| hypothetical protein TREMEDRAFT_46029 [Tremella mesenterica DSM
1558]
Length = 558
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 144/324 (44%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ K K+ I +++ GA QI L+ E +V+TP
Sbjct: 202 GPIVLILAPTRELAVQIQTEATKFGKSSRIRNTAIYGGAPKGPQIRDLQRGV-EVVVATP 260
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 261 GRLIDMLESGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKD 320
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ L +GS++ L+ N +V Q V +C + +++ + +L H
Sbjct: 321 VQRLAMDFLHDFIQVNIGSLD-LTANHNVQ-------QIVEICTNYDKRNM----MLKHL 368
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ E KVL VG +L L+ G+ ++ V ++ + +
Sbjct: 369 --EQISQENAKVLIFVGTKRVADDLTKHLRTDGWPALAIHGDKQQGERDWVLSEFKSGRS 426
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
MI D S ++ + + VI DF + ++YV + R +G ++FFT D++
Sbjct: 427 PIMIATDVASRGIDVRDIKYVINYDFPNNCEDYVHRIGRTGRAGQTGTAYTFFTADNSKS 486
Query: 544 AGQMIEILEQCGQVVPDALRDLCH 567
A +++ IL + +P L ++
Sbjct: 487 ARELVGILRESKADIPPELAEMAQ 510
>gi|238878589|gb|EEQ42227.1| hypothetical protein CAWG_00429 [Candida albicans WO-1]
Length = 529
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 14/287 (4%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G++ V+++ G + D QI +++ +V+TP RL+ L++ AI++ V+ LV+D D
Sbjct: 216 GVNCVAVYGGVSKDDQIRKIKTAN--VVVATPGRLVDLINDGAINLGKVNYLVLDEADRM 273
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSA 398
L KG D ++I + + + T++F N + + ++ S +
Sbjct: 274 LEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANK 333
Query: 399 CIIQSVNVCAS-DEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD-SKFQNLVSTLKCK 456
I Q V V D+EK L IQ+L + + + + K+ S+ +N LK
Sbjct: 334 RITQVVEVINKFDKEKKL--IQLLRKYNANESSDNKILIFALYKKEASRIENF---LKRN 388
Query: 457 GYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKN 515
+S++ + + + + + + ++ D + ++ +VVI F +++++
Sbjct: 389 RFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIED 448
Query: 516 YVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
YV + R G H+ FT+D+ +G + IL Q VP+ L
Sbjct: 449 YVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPEEL 495
>gi|224065635|ref|XP_002301895.1| predicted protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| predicted protein [Populus trichocarpa]
Length = 1112
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 141/328 (42%), Gaps = 36/328 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S K KA I V ++ G+ + QI+ L+ E +V TP
Sbjct: 545 GPIGLVMAPTRELVQQIHSDIKKFAKALSIRCVPVYGGSGVAQQISELKRGT-EIVVCTP 603
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ K ++ V+ LV+D D + ++ I Q+I TV+F+
Sbjct: 604 GRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATF 663
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L + +SV ++ I Q V + D+ + L+ +++L Y
Sbjct: 664 PRQVETLARKVLNKPVEIQVGGRSVVNKD--ITQLVELRTEDQ-RWLRLLELLGEWY--- 717
Query: 429 FHSEPLKVLYIVGK----DSKFQNLV----STLKCKGYSISTGSNCIVSHIKNSVEADGR 480
+ K+L V DS F+NL+ L G T +S K +V
Sbjct: 718 ---QKGKILIFVQSQDKCDSLFRNLLKFGYPCLSLHGAKDQTDRESTISDFKTNV----- 769
Query: 481 KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+++ ++ L+ + E+VI D ++YV + R G +F ++
Sbjct: 770 ----CNLMIATSVAARGLDVKDLELVINYDAPNHYEDYVHRVGRTGRAGRKGCAITFISE 825
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
DDA +A +++ LE QVVP L+ L
Sbjct: 826 DDARYAPDLVKALELSEQVVPQDLKALA 853
>gi|118404346|ref|NP_001072473.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Xenopus (Silurana)
tropicalis]
gi|112419339|gb|AAI21889.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Xenopus (Silurana)
tropicalis]
Length = 666
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 171/401 (42%), Gaps = 50/401 (12%)
Query: 186 IENAMRHDGVEQDNPLFVNSW-----GIEFWKCYSSAKDILETSGSSSTIVQIAWIVATA 240
+ +A+ G E+ P+ +W GI+ I +T + + +
Sbjct: 271 VMSALEKSGFERPTPIQSQAWPVILQGIDL-------IGIAQTGTGKTLAYLLPGFIHLD 323
Query: 241 ADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT 300
I R++++G P +L L ++E A +V++ C K G ++ ++ G ++QI
Sbjct: 324 LQPIPREQQDG-----PGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQIN 378
Query: 301 GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP 359
+ + +++TP RL L +++ ++ LV+D D L G +++ I +P
Sbjct: 379 KVTKGV-DIVIATPGRLNDLQMNNFVNLKSITYLVLDEADRMLDMGFEPQIMKILIDIRP 437
Query: 360 --HTVV----FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK 413
HT++ + D + + +++ ++ + L L + + Q V V +E++
Sbjct: 438 DRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDL-----AAVNTVTQHVLVIPEEEKR 492
Query: 414 ILKGIQVLDHAYGDHFHS--EPL-KVLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIV 468
A+ HF +P KV+ VGK +L S +G + + G+
Sbjct: 493 ----------AFVLHFIDSLKPQDKVIVFVGKKLVADDLSSDFSLQGIPVQSLHGNR--- 539
Query: 469 SHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARH 526
D K+ V ++ +++ L+ ++V V+ DF +++ YV + R
Sbjct: 540 EQCDREQALDDFKKGKVRILVATDLASRGLDVHDVTHVLNFDFPRNIEEYVHRVGRTGRA 599
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+G + T+ D AG++I ILE+ Q VP L D+
Sbjct: 600 GRTGESITLVTRKDWKVAGELISILERANQEVPGDLFDMAE 640
>gi|405966818|gb|EKC32055.1| Putative ATP-dependent RNA helicase DDX5 [Crassostrea gigas]
Length = 677
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 20/323 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L LV ++E A +V+ V A I V ++ GA QI L E ++TP
Sbjct: 200 GPIVLVLVPTRELAQQVQEVANDFGHASRIRNVCVYGGAPKGPQIRDLERGA-EICIATP 258
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 259 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKD 318
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L +L++ S + I+Q ++VC + EK K ++L+ +
Sbjct: 319 VRKLAEDFLKEYIQLNIGALQLSANHNILQIIDVC-DENEKEFKLTKLLEEI----MQEK 373
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD----GRKRPAVSMI 488
K L K + ++ +G+ + CI K+ E D G + ++
Sbjct: 374 ENKTLIFTETKRKADEITRRMRREGWPMM----CIHGD-KSQQERDWVLNGFRSGQTPIL 428
Query: 489 DKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+++ L+ + + VI D+ S ++YV + AR +G ++FFT D+ A
Sbjct: 429 VATDVASRGLDVGDIKFVINFDYPSSSEDYVHRIGRTARAGQTGTAYTFFTPDNVKQAND 488
Query: 547 MIEILEQCGQVVPDALRDLCHTS 569
+I +L++ QVV L L ++
Sbjct: 489 LISVLQEAKQVVNPKLVTLSQSA 511
>gi|224060117|ref|XP_002300045.1| predicted protein [Populus trichocarpa]
gi|222847303|gb|EEE84850.1| predicted protein [Populus trichocarpa]
Length = 791
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 171/416 (41%), Gaps = 59/416 (14%)
Query: 170 EKLDCPSKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSS 227
E PS+ L LNA G P+ SW I ++DI+ +GS
Sbjct: 168 ETTGFPSEILKEVLNA--------GFSAPTPIQAQSWPIAL-----QSRDIVAVAKTGSG 214
Query: 228 STIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHT 286
T+ +++ I K GP +L L ++E A +++ K K+
Sbjct: 215 KTL---GYLIPGF---IHLKRSCNDPRLGPTVLVLSPTRELATQIQVEAVKFGKSSRFSC 268
Query: 287 VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVD---RLDSLS 343
L+ GA Q+ L + +V+TP RL ++ ++ + +S VS LV+D R+ +
Sbjct: 269 TCLYGGAPKGPQLKELDRGA-DIVVATPGRLNDILEMRRVSLSQVSYLVLDEADRMLDMG 327
Query: 344 KGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACII 401
+ I + + + T+++ +LL+ + N ++++ VA++S I
Sbjct: 328 FEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKS--IT 385
Query: 402 QSVNVCASDE-----EKILKGIQVLDHAYGDHFHSEPLKVLYIVGK---DSKFQNLVSTL 453
Q V + A E E+IL+ + S +++ K D +NL
Sbjct: 386 QYVELLAPLEKHRRLEQILRSQE-----------SGSKIIIFCSTKKMCDQLSRNLTRQF 434
Query: 454 KC---KGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
G + + ++S + + P + D ++++ VVI DF
Sbjct: 435 GAAAIHGDKSQSERDYVLSQFRTG------RSPILVATDVA-ARGLDIKDIRVVINYDFP 487
Query: 511 ISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+++YV + R +G+ ++FF DA HA +I++LE Q VP +RD+
Sbjct: 488 TGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKHASDLIKVLEGANQQVPPEIRDMA 543
>gi|67900874|ref|XP_680693.1| hypothetical protein AN7424.2 [Aspergillus nidulans FGSC A4]
gi|40742814|gb|EAA62004.1| hypothetical protein AN7424.2 [Aspergillus nidulans FGSC A4]
Length = 498
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 22/290 (7%)
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-L 342
I + G D Q L+S +V+TP RL L + ++D+ V LV+D D L
Sbjct: 175 IQVACIFGGVKKDEQREALKSAA--VVVATPGRLKDLQNDGSLDLGRVKYLVLDEADRML 232
Query: 343 SKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---LLGSINRLSL--NQSVA 394
KG D +I K TV+F T T P V+NL + S +++ + S
Sbjct: 233 DKGFEQDIKDIISPMPVSKRQTVMF----TATWPPIVRNLASTFMTSPVTVTIGGDPSAD 288
Query: 395 SQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK 454
++ I+ V EK + +Q+L+ H P KVL + + L+
Sbjct: 289 PRANSRIKQVVEVVKPHEKEQRLVQILNR----HQRGTPDKVLAFCLYKKEAMRVERLLR 344
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIIS 512
KG+ ++ G + +S + + K A +++ ++ L+ ++V+ F ++
Sbjct: 345 TKGFKVA-GIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLT 403
Query: 513 MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++YV + R G + FT+ D A +G +I +L+ Q VP+AL
Sbjct: 404 VEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVLKAANQEVPEAL 453
>gi|326916320|ref|XP_003204456.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Meleagris gallopavo]
Length = 571
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 158/384 (41%), Gaps = 34/384 (8%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEK 249
+R G ++ P+ +W I I +T + + + A+ I + E+
Sbjct: 182 IRKIGFQKPTPIQSQAWPIILQGI--DLIGIAQTGTGKTLAYLMPGFIHLASQPIPKDER 239
Query: 250 EGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEF 309
GP +L L ++E A +V + C G ++ ++ G QI + + +
Sbjct: 240 -----GGPGMLVLAPTRELALQVEAECLKYTYKGYKSICIYGGGDRKAQIN-VVTKGVDI 293
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCL 368
+++TP RL L I++ ++ LV+D D L G +++ I +P +
Sbjct: 294 VIATPGRLNDLQMNNFINLKSITYLVLDEADKMLDMGFEPQIMKILIDVRPDR---QTVM 350
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEKILKGIQVLDHAY 425
T + P L S R + V + + +V V ++EEK A+
Sbjct: 351 TSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVVVINEEEK---------KAF 401
Query: 426 GDHF--HSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIVSHIKNSVEADGR 480
++F +P K + VGK S ++ S L KG + + G D
Sbjct: 402 MENFIDSMKPKDKAIIFVGKKSTADDIASDLGVKGVPVQSLHGDR---EQCDREQALDDF 458
Query: 481 KRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
K+ V ++ +++ L+ +++ V DF +++ YV + R +G + TK
Sbjct: 459 KKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITK 518
Query: 539 DDAAHAGQMIEILEQCGQVVPDAL 562
D A ++I+IL++ QVVPD L
Sbjct: 519 KDWKAASELIDILQRANQVVPDEL 542
>gi|336272585|ref|XP_003351049.1| hypothetical protein SMAC_04353 [Sordaria macrospora k-hell]
gi|380090816|emb|CCC04986.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1190
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L + ++E ++ S +P KA + V+ + G AI QI L+ E +V+TP
Sbjct: 628 GAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAELKRGA-EIIVATP 686
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
RL+ L++ V+ + + LV+D D + G +++ + +P T++F+
Sbjct: 687 GRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 743
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + +V +S I Q V V + +K + +++L Y
Sbjct: 744 --ATMPRIIDSLTKKVLRDPVEITVGGRSVVAPEITQIVEVM-DEGKKFNRLLELLGELY 800
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
D + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 801 AD---DDDVRSLIFVERQEKADDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 854
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I + ++++ ++VI D +++YV R +G +F T++
Sbjct: 855 VCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 914
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VPD L ++
Sbjct: 915 NCASGIAKALEQSGQPVPDRLNEM 938
>gi|409049919|gb|EKM59396.1| hypothetical protein PHACADRAFT_249858 [Phanerochaete carnosa
HHB-10118-sp]
Length = 851
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 37/331 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP L+ + V + G+ I QI ++ E +V TP
Sbjct: 266 GPVAVVMTPTRELAVQIHRECKPFLRVLNLRAVCAYGGSPIKDQIAEMKKG-AEIIVCTP 324
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ LV+D R+ + + I +I TV+F+
Sbjct: 325 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS--- 381
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ P + L I R L +V +S A I+ + ++ K + +++L Y
Sbjct: 382 --ATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRDEDTKFNRLLEILGQTYN 439
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCI-----VSHIKNSVEAD 478
+ S + L V + NL+ L KGY S+ G + I ++ K+ V
Sbjct: 440 EDPES---RTLIFVDRQEAADNLLRELMRKGYLCMSLHGGKDQIDRDQTIADFKSGV--- 493
Query: 479 GRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
V ++ ++ L+ + ++VI D M++YV R G +F
Sbjct: 494 ------VPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFI 547
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
T + ++ + L+ VP L DL +
Sbjct: 548 TPEQDRYSVDIYRALKASNAAVPKELEDLAN 578
>gi|350536495|ref|NP_001233197.1| probable ATP-dependent RNA helicase DDX46 [Sus scrofa]
gi|336092215|gb|AEI00731.1| DEAD box polypeptide 46 [Sus scrofa]
Length = 1032
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSGVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLMGI 415
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS T+ + + D + +E EG P + + ++E A ++ CK K
Sbjct: 416 AKTGSGKTMAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 470
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 471 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 529
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R + +P TV+F+ + P L I + V
Sbjct: 530 EADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 584
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 585 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 636
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|7573310|emb|CAB87628.1| DRH1 DEAD box protein-like [Arabidopsis thaliana]
Length = 713
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 48/336 (14%)
Query: 253 SFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
S GP +L L ++E A +++ K K+ I L+ GA Q+ + + +V
Sbjct: 298 SRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGV-DIVV 356
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RL ++ +K I + VS LV+D D + IR+ ++ P T+++
Sbjct: 357 ATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW 416
Query: 369 TYTSVPAVQNLLL--GSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVL 421
+LL+ +N ++++ VA++S I Q++ V A E E+IL+
Sbjct: 417 PKEVRKIAADLLVNPAQVNIGNVDELVANKS--ITQTIEVLAPMEKHSRLEQILR----- 469
Query: 422 DHAYGDHFHSEPLKVLYIVGK-----DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
EP + I D +NL T + K+ E
Sbjct: 470 --------SQEPGSKIIIFCSTKRMCDQLARNLTRTFGA----------AAIHGDKSQAE 511
Query: 477 ADG-----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530
D R ++ D + ++++ VV+ DF +++YV + R +G
Sbjct: 512 RDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATG 571
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ ++FF DA HA +I+ILE Q VP +R++
Sbjct: 572 LAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMA 607
>gi|414591851|tpg|DAA42422.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 1353
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 52/335 (15%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCE--PEFLVS 312
GP +L L ++E A+++++ V K ++ + L+ G + ++ LR E + +V+
Sbjct: 672 GPTVLVLAPTRELASQIQAEVVKFGQSSRVSCTCLYGGTS---KVPQLRELERGADIVVA 728
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLT 369
TP RL ++ +K I++ VSLLV+D D + IR+ + P T+++
Sbjct: 729 TPGRLNDILEMKRINLHQVSLLVLDEADRMLDMGFEPQIRKIVDELPNARQTLMYTATWP 788
Query: 370 YTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVL 421
+LL +GSI+ L N+S I Q V V D+++ L+ Q+L
Sbjct: 789 KEVTKIAGDLLRDPVQVNIGSIDELVANKS-------ITQYVEVVPPMDKQRRLE--QIL 839
Query: 422 DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI---KNSVEA 477
GD + SK ST K C + G N I K+ E
Sbjct: 840 ----GDQE------------RGSKIIIFCSTKKMCDQLARGIGRNFNAVSIHGDKSQAER 883
Query: 478 DG-----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
D R A ++ D + ++++ VVI DF +++YV + R +G+
Sbjct: 884 DNVLNQFRTGRASVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGV 943
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
++FF++ D +A ++++L+ Q+VP L+D+
Sbjct: 944 SYTFFSEQDWKYACDLVKLLQGANQLVPPQLQDMA 978
>gi|357448701|ref|XP_003594626.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355483674|gb|AES64877.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 1182
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 164/413 (39%), Gaps = 78/413 (18%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEG 251
G P+ +W I +DI + +GS T+ +++ I +++
Sbjct: 514 GFSNPTPIQAQTWPIAL-----QGRDIVAIAKTGSGKTL---GYLMPAF---ILLRQRRN 562
Query: 252 FSFTGPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFL 310
S GP +L L ++E A +++ V K ++ + L+ GA Q+ L + +
Sbjct: 563 NSLNGPTVLVLAPTRELATQIQEEVFKFARSSRVSCTCLYGGAPKALQLKELDRGA-DIV 621
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDC 367
V+TP RL ++ +K ID VSLLV+ DR+ + + I I + T+++
Sbjct: 622 VATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT 681
Query: 368 LTYTSVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKIL 415
+LL +G+++ L+ N+S I Q V V E E+IL
Sbjct: 682 WPKEVRKIAGDLLVNPVQVNIGNVDELAANKS-------ITQYVEVVPQMEKQRRLEQIL 734
Query: 416 KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI--- 471
+ + + SK ST K C + S G + I
Sbjct: 735 RSQE----------------------RGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGD 772
Query: 472 KNSVEAD---GRKRPAVSMI-----------DKDHISTAELEEYEVVIVPDFIISMKNYV 517
K+ E D G+ R S I D I L VVI DF +++YV
Sbjct: 773 KSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRLVSLY-VRVVINYDFPNGVEDYV 831
Query: 518 EILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTSP 570
+ R +G+ ++FF++ D HAG +I++LE Q V LR + P
Sbjct: 832 HRIGRTGRAGATGVAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGP 884
>gi|45198439|ref|NP_985468.1| AFL080Wp [Ashbya gossypii ATCC 10895]
gi|74693084|sp|Q755A5.1|DBP3_ASHGO RecName: Full=ATP-dependent RNA helicase DBP3
gi|44984326|gb|AAS53292.1| AFL080Wp [Ashbya gossypii ATCC 10895]
gi|374108696|gb|AEY97602.1| FAFL080Wp [Ashbya gossypii FDAG1]
Length = 535
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS- 341
G++ ++ G D Q L+ + +V+TP RLL L+ + ++GV LV+D D
Sbjct: 222 GLNCCCVYGGVQKDSQREQLKKAQ--VVVATPGRLLDLIEEGSAKLAGVQYLVLDEADRM 279
Query: 342 LSKG---DTLSLIRQSISGKPHTVVFNDC-------LTYTSVPAVQNLLLGSINRLSLNQ 391
L KG D +I+++ S T++F L T + A + +G+ + LS N+
Sbjct: 280 LEKGFEEDIKRIIKETKSDVRQTLMFTATWPKEVRELASTFMRAPVKVSIGNRDELSANK 339
Query: 392 SVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+ +Q +I +EK L +++L ++ + + + K++ +
Sbjct: 340 RI-TQVVEVIDPFK-----KEKRL--LELLKQYQSGAKKNDKVLIFALYKKEA--SRVER 389
Query: 452 TLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFI 510
LK GY+++ + + ++ + A ++ D + ++ + VI F
Sbjct: 390 NLKYNGYNVAAIHGDLSQQQRTQALSEFKAGTANLLLATDVAARGLDIPNVKTVINLTFP 449
Query: 511 ISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++++YV + R +G+ H+ FT+ + AG ++ +L GQ VP+ L
Sbjct: 450 LTVEDYVHRIGRTGRAGATGVAHTLFTEQEKHLAGALVNVLNGAGQPVPEEL 501
>gi|449549675|gb|EMD40640.1| hypothetical protein CERSUDRAFT_80293 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 27/326 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP L+ G+ V + G+ I QI ++ E +V TP
Sbjct: 296 GPVAVVMTPTRELAVQIHRECKPFLRVLGLRAVCAYGGSPIKDQIAEMKKGA-EIIVCTP 354
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L+ S + ++ V+ LV+D R+ + + I +I TV+F+
Sbjct: 355 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS--- 411
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ P + L I R L +V +S A I + ++ K + +++L Y
Sbjct: 412 --ATFPRQMDSLARKILRKPLEITVGGRSVVAPEIDQIVEVRDEDSKFNRLLEILGQTYN 469
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
+ S + L V + NL+ L +GY S+ G + + ++S AD K
Sbjct: 470 EDPES---RTLIFVDRQEAADNLLRELLRRGYLCMSLHGGKDQV---DRDSTIADF-KSG 522
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
V ++ ++ L+ + ++VI D M++YV R G +F T +
Sbjct: 523 VVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQD 582
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCH 567
++ + L+ VP L DL +
Sbjct: 583 RYSVDIYRALKASNAAVPKELEDLAN 608
>gi|79513425|ref|NP_196965.2| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
gi|332004671|gb|AED92054.1| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
Length = 712
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 48/336 (14%)
Query: 253 SFTGPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
S GP +L L ++E A +++ K K+ I L+ GA Q+ + + +V
Sbjct: 298 SRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGV-DIVV 356
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RL ++ +K I + VS LV+D D + IR+ ++ P T+++
Sbjct: 357 ATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW 416
Query: 369 TYTSVPAVQNLLL--GSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVL 421
+LL+ +N ++++ VA++S I Q++ V A E E+IL+
Sbjct: 417 PKEVRKIAADLLVNPAQVNIGNVDELVANKS--ITQTIEVLAPMEKHSRLEQILR----- 469
Query: 422 DHAYGDHFHSEPLKVLYIVGK-----DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
EP + I D +NL T + K+ E
Sbjct: 470 --------SQEPGSKIIIFCSTKRMCDQLARNLTRTFGA----------AAIHGDKSQAE 511
Query: 477 ADG-----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530
D R ++ D + ++++ VV+ DF +++YV + R +G
Sbjct: 512 RDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATG 571
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ ++FF DA HA +I+ILE Q VP +R++
Sbjct: 572 LAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMA 607
>gi|300707737|ref|XP_002996065.1| hypothetical protein NCER_100895 [Nosema ceranae BRL01]
gi|239605329|gb|EEQ82394.1| hypothetical protein NCER_100895 [Nosema ceranae BRL01]
Length = 528
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 14/318 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E +++ V + F + +++ G + Q + S E +V P
Sbjct: 200 GPIVLVLAPTRELCLQIKDVFDEYCRFFNMRCTAVYGGVSSYTQKRDI-SMGCEVVVGCP 258
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYT-S 372
RL+ L A+ + V+ LV+D D L G L + ++ P T+
Sbjct: 259 GRLIDLNEQGALHFNRVTFLVLDEADRMLDMGFEPQLKKIIVNTNPDRQTLMWSATWPKE 318
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + + + +L++ + I Q V+V S EK K + L+ +
Sbjct: 319 VRRLAENYMKNFVQLTIGSVELKTNIKIKQIVSVIDS-HEKANKLHESLNEKKNE----- 372
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
KV+ NL L +GY +I++ + +D R +I D
Sbjct: 373 --KVIIFANTKRMCDNLEDDLSRRGYKAVAIHGDKSQNIRDRIISDFRSGYKNILIATDV 430
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVS-GILHSFFTKDDAAHAGQMIEI 550
+ +++ +VI DF ++++YV + AR V+ G+ HSFFT +++A A ++++I
Sbjct: 431 AARGLDIKNVALVINYDFPNNIEDYVHRIGRTARGDVTEGLSHSFFTSENSACAKELVKI 490
Query: 551 LEQCGQVVPDALRDLCHT 568
L++ Q VP L D+ T
Sbjct: 491 LKEANQDVPSKLIDMSTT 508
>gi|160380699|sp|A7EYW0.2|DBP3_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp3
Length = 596
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 144/318 (45%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAK-VRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A + + K KA G+ V ++ G D QI L++ + +V+TP
Sbjct: 252 GPRAVVVSPTRELAMQSYEQIVKLAKASGLECVCVYGGVPKDEQIRALKTAD--IVVATP 309
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSIS-----GKPHTVVFNDCLT 369
RL L++ D+S +V+D D + IR+ I+ GK T++F
Sbjct: 310 GRLNDLINQGCADLSKARYVVLDEADRMLDKGFEEEIRKIINTTPSLGKRQTLMFTATWP 369
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQ---SACIIQSVNVCASDEEKILKGIQVLDHAYG 426
SV + + + S ++++ + ++ I+Q V V +K + +Q+L
Sbjct: 370 -ESVRELASTFMTSPVKIAIGDNPTGDLRANSRIVQKVEVVEP-RDKEYRLMQLLKQYQS 427
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ + V + K++ + ++ KG+ ++ G + +S + + + K
Sbjct: 428 GSQKDDRILVFCLYKKEA--TRVEGFIRQKGFRVA-GIHGDLSQEQRTRSLEAFKSGNTP 484
Query: 487 MIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++VI F +++++YV + R G+ + FT+ D A +
Sbjct: 485 VLVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLFTEHDKAQS 544
Query: 545 GQMIEILEQCGQVVPDAL 562
G +I +L+ Q VPD L
Sbjct: 545 GALINVLKAANQPVPDEL 562
>gi|355691613|gb|EHH26798.1| hypothetical protein EGK_16865 [Macaca mulatta]
Length = 1033
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 172/415 (41%), Gaps = 41/415 (9%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET 223
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 364 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 415
Query: 224 SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAF 282
+ + S + IA+++ + ++ E GP + + ++E A ++ CK K
Sbjct: 416 AKTGSGKI-IAFLLPMFRHIMGQRSLE--EGEGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVDRL 339
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEA 531
Query: 340 DSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQ 396
D + G ++R ++ TV+F+ + P L I + V +
Sbjct: 532 DRMFDMGFEPQVMRIVDNVHPDRQTVMFS-----ATFPRAMEALTSRILSKPIEVQVGGR 586
Query: 397 SACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 587 SV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQGHADGLLKD 638
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 639 LMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 698 NHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|440900472|gb|ELR51601.1| Putative ATP-dependent RNA helicase DDX43 [Bos grunniens mutus]
Length = 641
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 146/326 (44%), Gaps = 43/326 (13%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ +V ++ G D QI L S + +++TP
Sbjct: 308 GPGMLVLTPTRELALQVDAECSEYSYRGLKSVCIYGGGDRDGQIKDL-SKGADIIIATPG 366
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP--HTVVFNDCLTYTS 372
RL L + + ++ LV+D D L G +++ + +P TV+ + Y
Sbjct: 367 RLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPYAV 426
Query: 373 VPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
Q+ L +G+++ +++ + + Q++ V DE++ IQ A+
Sbjct: 427 RRLAQSYLKEPMIVYVGTLDLVAV--------STVTQNIIVTTEDEKR--SHIQ----AF 472
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP-- 483
D S KV+ V + + +L S L + S+ + + + E R+R
Sbjct: 473 IDSM-SPKDKVIIFVSRKAVADHLSSDLGIRRISVES--------LHGNREQSDRERALK 523
Query: 484 -----AVSMIDKDHISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFF 536
V ++ +++ L+ ++V V DF +++ YV + R +G+ +
Sbjct: 524 SFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLI 583
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDAL 562
T++D AG++I ILE+ Q VP+ L
Sbjct: 584 TRNDWKIAGELINILERANQSVPEDL 609
>gi|159469622|ref|XP_001692962.1| DEAD box RNA helicase [Chlamydomonas reinhardtii]
gi|158277764|gb|EDP03531.1| DEAD box RNA helicase [Chlamydomonas reinhardtii]
Length = 407
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 160/363 (44%), Gaps = 28/363 (7%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W + +D++ +GS T+ + + A++E + GPF + + ++E
Sbjct: 19 WPIILAGRDLIGIAATGSGKTL---GFGLPMLRHIAAQREAGVVTGKGPFAVVMAPTREL 75
Query: 269 AAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ V + + G+ TV ++ G QI LRS E +V TP R+ L++ A+
Sbjct: 76 ALQINEVLEEAGSKCGVRTVCVYGGVPKHPQIQALRSGV-EVVVGTPGRMEDLLNDGALK 134
Query: 328 VSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSI 384
++ ++ V+D R+ L + I T++F + T AVQ L + +
Sbjct: 135 LNQITYAVLDEADRMLDLGFEPHIRAIMNLTRADRQTLMF----SATWPTAVQKLAVAFL 190
Query: 385 N---RLSLNQSVASQSACIIQSVNVCA--SDEEKILKGIQVLDHAYGDHFHSEPLKVLYI 439
+ ++++ + S I Q V V + + ++L +Q A G +V+
Sbjct: 191 SHPVKVTIGSQDLAASHSITQHVEVIEPHARDGRLLDLLQQYHGAKGRKN-----RVIIF 245
Query: 440 VGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE 499
V + + L KG+ + + +S + + + K AV ++ ++ L+
Sbjct: 246 VLYKKEAPRVEQLLTRKGWK-AGAIHGDISQQQRTDAVEKFKSGAVPLLIATDVAARGLD 304
Query: 500 --EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF-TKDDAAHAGQMIEILEQCGQ 556
+ EVVI F ++ ++YV + R +G+ ++FF D AG++I +L + GQ
Sbjct: 305 IPDVEVVINYSFPLTTEDYVHRIGRTGRAGKTGVAYTFFCAGPDKPRAGELINVLREAGQ 364
Query: 557 VVP 559
VP
Sbjct: 365 EVP 367
>gi|344264156|ref|XP_003404159.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX43-like [Loxodonta africana]
Length = 765
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 139/313 (44%), Gaps = 17/313 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ +V ++ G D QI + + +++TP
Sbjct: 432 GPGMLVLTPTRELALQVEAECSKYSYKGLKSVCIYGGGDRDGQIQDVTKGV-DIIIATPG 490
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L +++ G++ LV+D D L G +++ + +P +T + P
Sbjct: 491 RLNDLQMNNFVNLKGITYLVLDEADKMLDMGFEPQIMKILLDVRPDR---QTIMTSATWP 547
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSE 432
L S R + V + + +V N+ + EE+ IQ+ + S
Sbjct: 548 HAVRRLAESYLRDPMIVYVGTLDLVAVNTVKQNIIVTTEEEKRSHIQIFLESM-----SP 602
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
KV+ V + + +L S L + S+ S N S + ++E K V ++
Sbjct: 603 KDKVIVFVSRKAVADHLSSDLILRRISVESLHGNREQSDREKALE--NFKTGKVRILIAT 660
Query: 492 HISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
+++ L+ ++V V DF +++ YV + R +G+ + T++D A ++I
Sbjct: 661 DLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRNDWRIATELIN 720
Query: 550 ILEQCGQVVPDAL 562
ILE+ Q VP+ L
Sbjct: 721 ILERANQSVPEDL 733
>gi|297478376|ref|XP_002690065.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Bos taurus]
gi|296484278|tpg|DAA26393.1| TPA: rCG25924-like [Bos taurus]
Length = 643
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 146/326 (44%), Gaps = 43/326 (13%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ +V ++ G D QI L S + +++TP
Sbjct: 310 GPGMLVLTPTRELALQVDAECSEYSYRGLKSVCIYGGGDRDGQIKDL-SKGADIIIATPG 368
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP--HTVVFNDCLTYTS 372
RL L + + ++ LV+D D L G +++ + +P TV+ + Y
Sbjct: 369 RLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPYAV 428
Query: 373 VPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
Q+ L +G+++ +++ + + Q++ V DE++ IQ A+
Sbjct: 429 RRLAQSYLKEPMIVYVGTLDLVAV--------STVTQNIIVTTEDEKR--SHIQ----AF 474
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP-- 483
D S KV+ V + + +L S L + S+ + + + E R+R
Sbjct: 475 IDSM-SPKDKVIIFVSRKAVADHLSSDLGIRRISVES--------LHGNREQSDRERALK 525
Query: 484 -----AVSMIDKDHISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFF 536
V ++ +++ L+ ++V V DF +++ YV + R +G+ +
Sbjct: 526 SFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLI 585
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDAL 562
T++D AG++I ILE+ Q VP+ L
Sbjct: 586 TRNDWKIAGELINILERANQSVPEDL 611
>gi|410901955|ref|XP_003964460.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Takifugu
rubripes]
Length = 634
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 132/307 (42%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 226 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +E K K IQ+++ + +
Sbjct: 286 VRQLAEDFLKDYVQINVGALELSANHNILQIVDVCLENE-KDNKLIQLMEEIMAEKEN-- 342
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + ++ ++ G+ ++ V A+ R A +I D
Sbjct: 343 --KTIIFVETKKRCDDITRRMRRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPILIATDV 400
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR T G ++FFT + A ++I +L
Sbjct: 401 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARELIRVL 460
Query: 552 EQCGQVV 558
E+ Q +
Sbjct: 461 EEARQAI 467
>gi|241747700|ref|XP_002414349.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215508203|gb|EEC17657.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 519
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 153/370 (41%), Gaps = 34/370 (9%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W +D+ + +GS T+ + +D + EG P + L ++E
Sbjct: 125 WPVVLGGRDLVGIAQTGSGKTLAYVLPAAIHMSDQPQPERDEG-----PIGVVLAPTREL 179
Query: 269 AAKVRSVCKPL--KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
++ V AF + ++ G + QI L+ ++TP RLL ++ AI
Sbjct: 180 VQQISQVAYEWCGGAFRLKGAPVYGGVSKGPQIARLQGGA-HICIATPGRLLDILETGAI 238
Query: 327 DVSGVSLLVVDRLDSLSKGDTLSLIRQSI-SGKP--HTVVFNDCLTYTSVPAVQNLLLGS 383
++ S LV+D D + IR+ + +P TV+++ + L
Sbjct: 239 NLLRCSYLVLDEADRMLDMGFEPQIRKIVDQTRPDRQTVMWSATWPSEVRDLAEEFLTDH 298
Query: 384 INRLSLNQSVASQSAC----IIQSVNVCAS--DEEKILKGIQVLDHAYGDHFHSEPLKVL 437
+ +V S+ C I Q V+VC EEK+L+ ++ ++ A GD + L
Sbjct: 299 VQ-----ITVGSEDLCANHNIRQVVHVCQGFEKEEKLLETLREIN-AEGDQ------RTL 346
Query: 438 YIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAE 497
V ++ +V L G+ + ++ +S K + D + ++ ++
Sbjct: 347 IFVATKARVVTIVQNLYKNGFR-AVATHGDLSQNKRDIALDRFRSGKTPILVATDVAARG 405
Query: 498 LE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCG 555
L+ + + VI D+ + ++YV + R SG + FT D+A A Q++ +L++
Sbjct: 406 LDVSDIKYVINYDYPDTSESYVHRIGRTGRSNRSGTAITLFTPDNAGQAKQLVSVLQEAK 465
Query: 556 QVVPDALRDL 565
Q V L +L
Sbjct: 466 QEVNPELLEL 475
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 42/331 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S K K GI V ++ G+ + QI+ L+ E +V TP
Sbjct: 572 GPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVAQQISELKRG-AEVVVCTP 630
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ K ++ V+ LV+D D + ++ I Q+ TV+F+
Sbjct: 631 GRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFS--- 687
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
+ P +L + + V +S I Q V V + E+ + +++L Y
Sbjct: 688 --ATFPRQVEILARRVLNKPVEIQVGGRSVVNKDISQLVEV-RPESERFFRLLELLGEWY 744
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEA 477
E K+L V K +L L GY T +S K++V
Sbjct: 745 ------EKGKILIFVHSQEKCDSLFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNV-- 796
Query: 478 DGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+++ ++ L+ E E+VI D ++YV + R G +F
Sbjct: 797 -------CNLLIATSVAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGSAITF 849
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ DDA +A +++ LE QVVPD L+ L
Sbjct: 850 ISDDDARYAPDLVKALELSEQVVPDDLKALA 880
>gi|392579156|gb|EIW72283.1| hypothetical protein TREMEDRAFT_41622 [Tremella mesenterica DSM
1558]
Length = 599
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 14/313 (4%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
+L L ++E A + + L + G+ +V L G D Q+ L + +V TP R+
Sbjct: 252 MLVLAPTRELAQQSHTTLLALGEKAGVGSVCLFGGVGKDDQLRELGKKTTKIVVGTPGRV 311
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFNDCLTYTS 372
L L K +D SGV+ LV+D D + + IR+ I+ P TV+F+ S
Sbjct: 312 LDLADSKELDFSGVTYLVLDEADRMLDQGFENDIRRIIAHCPENAHRQTVMFSATWP-ES 370
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS- 431
V + + L R+++ S + I Q V V + +K + + L H +
Sbjct: 371 VRRLASTFLRDPLRITVGSDELSANKRIEQVVEVLDNGFQKDARMLHHLRAHLKAHPSTL 430
Query: 432 -EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
P ++L + Q L STL+ GY++ + + D K V ++
Sbjct: 431 KAPTRILVFALYKKEAQRLESTLRRNGYNVGALHGDMGQDARFKA-LDKFKEGKVEILVA 489
Query: 491 DHISTAELEEYEVVIVPD--FIISMKNYVEILTSMARHTVSGILHSFFTKD--DAAHAGQ 546
++ L+ +V +V + F ++ +++V R SG +FFT + + A AG+
Sbjct: 490 TDVAARGLDIPDVGLVLNVTFPLTTEDFVHRCGRTGRAGKSGKAVTFFTGEAHEKALAGE 549
Query: 547 MIEILEQCGQVVP 559
+ +L G +P
Sbjct: 550 FMRVLRDVGAEIP 562
>gi|367042554|ref|XP_003651657.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
gi|346998919|gb|AEO65321.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
Length = 1193
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 147/323 (45%), Gaps = 25/323 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S P KA + V+ + G AI QI L+ E +V+TP
Sbjct: 633 GPIGLIMTPTRELCTQIYSDLLPFTKALKLRAVAAYGGNAIKDQIAELKRGA-EIIVATP 691
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ + +V+D D + G +++ + +P T++F+
Sbjct: 692 GRMIDLLAANSGRVTNLKRATYIVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 748
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYG 426
++P + + L + R + +V +S + V EE K ++ +++L Y
Sbjct: 749 --ATMPRIIDALTKKVLREPVEITVGGRSVVAPEITQVVEIIEESKKFVRLLELLGELYA 806
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRP 483
D + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 807 D---DDDVRALIFVERQEKADDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKGV 860
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
+I + ++++ +V+ D +++YV R +G +F T++
Sbjct: 861 CPILIATSVAARGLDVKQLTLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEN 920
Query: 543 HAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VP+ L ++
Sbjct: 921 CAVGIAKALEQSGQPVPERLNEM 943
>gi|440637394|gb|ELR07313.1| hypothetical protein GMDG_02493 [Geomyces destructans 20631-21]
Length = 582
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 135/291 (46%), Gaps = 19/291 (6%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ V ++ G A D Q L++ + +V+TP RL L+ + D+S VS +V+D D +
Sbjct: 266 GMQAVCVYGGVAKDEQRRALKTAD--IVVATPGRLNDLIQEGSADLSKVSYVVLDEADRM 323
Query: 343 SKGDTLSLIRQSIS-----GKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQ- 396
IR+ I+ GK T++F SV ++ + + S ++++ +
Sbjct: 324 LDKGFEEEIRKIINTARPLGKRQTLMFTATWP-ESVRSLASTFMTSPIKIAIGDNPTGDL 382
Query: 397 --SACIIQSVNVCASDEEKILKGIQVL-DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTL 453
+ I+Q V V K + +Q+L +H G + + V + K++ + L
Sbjct: 383 RANTRIVQKVEVV-DPRGKEYRLLQILKEHQSGSQ-KDDRIIVFCLYKKEA--TRVEGFL 438
Query: 454 KCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPD--FII 511
+ KG ++ G + +S + + D K+ ++ ++ L+ V +V + F +
Sbjct: 439 RSKGIRVA-GIHGDLSQEQRTKSLDAFKKGTTPVLVATDVAARGLDIPAVKLVLNCTFPL 497
Query: 512 SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
++++YV + R G+ + FT+ D A +G +I +L+ Q VPD L
Sbjct: 498 TVEDYVHRIGRTGRAGKEGLAITLFTEHDKAQSGALINVLKAANQPVPDEL 548
>gi|440463671|gb|ELQ33225.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae Y34]
gi|440481910|gb|ELQ62446.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae P131]
Length = 1230
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 145/323 (44%), Gaps = 31/323 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ CKP LK G+ V + G I QI L+ E +V+T
Sbjct: 669 GPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGA-EIVVATT 727
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + + + + +V+D D + G +++ + +P TV+F+
Sbjct: 728 GRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIFANVRPDRQTVLFS--- 784
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
++P + + L+ + + + V +S A I + ++ K + +++L Y
Sbjct: 785 --ATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVEIRDEKSKFNRLLELLGELYK 842
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAV 485
D + ++ L V + K L+ L KGY C+ H K+ V+ D
Sbjct: 843 DD---DDVRSLIFVERQEKADELLRELLRKGY------GCMSLHGGKDQVDRDSTISDFK 893
Query: 486 SMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S + I+T+ ++++ ++V+ D +++YV R +G +F T++
Sbjct: 894 SGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEE 953
Query: 540 DAAHAGQMIEILEQCGQVVPDAL 562
A + + LEQ GQ VP+ L
Sbjct: 954 QENCAIGIAKALEQSGQPVPEKL 976
>gi|224083374|ref|XP_002307002.1| predicted protein [Populus trichocarpa]
gi|222856451|gb|EEE93998.1| predicted protein [Populus trichocarpa]
Length = 895
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 36/328 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S + K KA GI V ++ G+ + QI+ L+ E +V TP
Sbjct: 328 GPIGLIMAPTRELVQQIHSDIRKFTKALGIRCVPVYGGSGVAQQISELKRGT-EIVVCTP 386
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ K ++ V+ LV+D R+ + ++ I Q+I TV+F+
Sbjct: 387 GRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDHQTVLFSATF 446
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L + +SV ++ I Q V V + E+ + +++L
Sbjct: 447 PRQVETLARKVLNKPVEIQVGGRSVVNKD--INQLVEV-RPEGERWFRLLELLG------ 497
Query: 429 FHSEPLKVLYIVGK----DSKFQNLV----STLKCKGYSISTGSNCIVSHIKNSVEADGR 480
SE K+L V D+ F++L+ L G T +S K++V
Sbjct: 498 VWSEKGKILVFVQSQDKCDALFRDLLKFGHPCLSLHGAKDQTDRESTISDFKSNV----- 552
Query: 481 KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+++ ++ L+ + E+VI D ++YV + R G +FF++
Sbjct: 553 ----CNLLIATSVAARGLDVKDLELVINYDVPNHYEDYVHRVGRTGRAGRKGCAITFFSE 608
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
DDA +A +++ LE QVVP L+ L
Sbjct: 609 DDARYAPDLVKALELSEQVVPQDLKALA 636
>gi|432902667|ref|XP_004077037.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Oryzias
latipes]
Length = 650
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 153/364 (42%), Gaps = 31/364 (8%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQI-AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W S +D++ +G+ T+ + + + R E + GP +L L ++E
Sbjct: 257 WPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRAE-----WGGPGMLVLTPTRE 311
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ + CK G ++ ++ G QI ++S + +++TP RL L + I+
Sbjct: 312 LALQIETECKKYSYKGYKSICIYGGGDRRGQINLVKSGV-DIVIATPGRLNDLQMNELIN 370
Query: 328 VSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTS------VPAVQNLL 380
+ ++ LV+D D L G +++ + +P T+ S ++N +
Sbjct: 371 LFSITYLVLDEADRMLDMGFEPQIMKILLDIRPDRQTVMTSATWPSGVRRLAKSYLKNPM 430
Query: 381 LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIV 440
+ + L L + + Q++ + +E+K V+D K + V
Sbjct: 431 MVYVGTLDL-----AAVDTVQQTITIVQEEEKKAF----VMDFIRNMLPQD---KAIIFV 478
Query: 441 GKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE 500
GK K +L S L +G ++ + + D K V ++ +++ L+
Sbjct: 479 GKKIKADDLSSDLCLQGLAVQSLHGDREQRDREEALKD-FKESRVRILVATDLASRGLDV 537
Query: 501 YEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
+++ V DF +++ YV + R SG + T++D A ++I ILE+ GQ V
Sbjct: 538 HDITHVFNYDFPRNIEEYVHRVGRTGRAGRSGAAVTLVTREDWRMAPELIPILERSGQEV 597
Query: 559 PDAL 562
P L
Sbjct: 598 PHEL 601
>gi|126339554|ref|XP_001367967.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Monodelphis domestica]
Length = 772
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 287 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 345
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 346 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 405
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 406 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 462
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 463 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 515
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 516 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 575
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 576 LIKVLEEANQAINPKLMQL 594
>gi|349602917|gb|AEP98907.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Equus caballus]
Length = 667
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 161/395 (40%), Gaps = 40/395 (10%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADS 243
I N+++ G E+ P+ + S +D++ +GS TI + + D
Sbjct: 18 ILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 72
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL 302
+E EG P + + ++E A ++ CK K G+ V ++ G I QI L
Sbjct: 73 RPLEEGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL 127
Query: 303 RSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGK 358
+ E +V TP R++ ++ S + ++ V+ +V+D D + G ++R + +
Sbjct: 128 KRGA-EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVR 186
Query: 359 P--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL- 415
P TV+F+ + P L I + V +S VC+ E++++
Sbjct: 187 PDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVGGRSV-------VCSDVEQQVIV 234
Query: 416 ---KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIK 472
+ + H+ E V+ V K L+ L Y + I + +
Sbjct: 235 IEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDR 293
Query: 473 NSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSG 530
+S+ D K ++ ++ L+ +++V ++ ++YV R G
Sbjct: 294 DSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKG 352
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++F T+D A +AG +I+ LE G VP L L
Sbjct: 353 YAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 387
>gi|384498823|gb|EIE89314.1| hypothetical protein RO3G_14025 [Rhizopus delemar RA 99-880]
Length = 674
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ + KA+G+ +++ GA+ Q LRS E LV+TP
Sbjct: 322 GPIGLILAPTRELAIQIYQETRKFAKAYGLKVAAVYGGASKLEQFKDLRSGTVEILVATP 381
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
RL+ ++ +KA ++ VS LV+D D +
Sbjct: 382 GRLIDMIKMKATNLRRVSYLVLDEADRM 409
>gi|358335026|dbj|GAA28925.2| probable ATP-dependent RNA helicase DDX46, partial [Clonorchis
sinensis]
Length = 746
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 136/318 (42%), Gaps = 24/318 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ K L +A V ++ G I QI L+ E +V TP
Sbjct: 429 GPIALLLAPTRELALQIFKEAKKLAQAVDARVVCVYGGTGISEQIAELKRGA-EIIVCTP 487
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ +++ V+ + + +V+D D + G ++R + +P T +F+
Sbjct: 488 GRMIDMLAANGGRVTNLRRCTYIVLDEADRMFDLGFEPQVMRIVENCRPDRQTAMFS--- 544
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACI--IQSVNVCASDEEKILKGIQVLDHAYG 426
+ P + LL L + V +S ++ + +++EK K +++L
Sbjct: 545 --ATFPRLMELLARKALTLPIEIQVGGRSVVCSDVEQHALVLTEDEKFYKVLELLG---- 598
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ E VL V K L+ L GY + I + ++SV D KR +
Sbjct: 599 --IYQEAGSVLIFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVMTDF-KRGNIR 655
Query: 487 MIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++++V ++ ++YV R G ++F T D +A
Sbjct: 656 LLIATSVAARGLDVSDLMVVINYDCPNHYEDYVHRCGRTGRAGNKGFAYTFLTPDQERNA 715
Query: 545 GQMIEILEQCGQVVPDAL 562
G ++ +Q GQ P+ L
Sbjct: 716 GDIVRAFKQSGQKPPEDL 733
>gi|347831194|emb|CCD46891.1| hypothetical protein [Botryotinia fuckeliana]
Length = 603
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 144/318 (45%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAK-VRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A + + K KA G+ V ++ G D QI L++ + +V+TP
Sbjct: 259 GPRAVVVSPTRELAMQSYEQIVKLAKASGLECVCVYGGVPKDEQIRALKTAD--IVVATP 316
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSIS-----GKPHTVVFNDCLT 369
RL L++ D+S +V+D D + IR+ I+ GK T++F
Sbjct: 317 GRLNDLINQGCADLSKARYVVLDEADRMLDKGFEEEIRKIINTTPSLGKRQTLMFTATWP 376
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQ---SACIIQSVNVCASDEEKILKGIQVLDHAYG 426
SV + + S ++++ + ++ I+Q V V +K + +Q+L
Sbjct: 377 -ESVRELAATFMTSPVKIAIGDNPTGDLRANSRIVQKVEVV-EPRDKEYRLMQLLKQYQS 434
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ + V + K++ + S ++ KG+ ++ G + +S + + + K
Sbjct: 435 GSQKDDRILVFCLYKKEA--TRVESFIRQKGFRVA-GIHGDLSQEQRTRSLEAFKSGNTP 491
Query: 487 MIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++VI F +++++YV + R G+ + FT+ D A +
Sbjct: 492 VLVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLFTEHDKAQS 551
Query: 545 GQMIEILEQCGQVVPDAL 562
G +I +L+ Q VPD L
Sbjct: 552 GALINVLKAANQPVPDEL 569
>gi|367016443|ref|XP_003682720.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
gi|359750383|emb|CCE93509.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
Length = 512
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVV 363
+ +V+TP RLL L+ ++D+S VS LV+D D L KG D ++IR + + T++
Sbjct: 222 QVVVATPGRLLDLMQEGSVDLSNVSYLVLDEADRMLEKGFEEDIKNIIRSTNTSSRQTLM 281
Query: 364 FNDCL---------TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKI 414
F T+ S P + +G+ + LS N+ + I Q E K+
Sbjct: 282 FTATWPKEVRELASTFMSDPV--KVSIGNRDELSANKRITQVVEVIDQ-----FQKERKL 334
Query: 415 LKGIQVLDHAYGDHFHSEPLK---VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI 471
L+ ++ + S P K VL + + LK GY+++ + +S
Sbjct: 335 LELLK--------KYQSGPKKDEKVLIFALYKKEATRVERNLKYNGYNVA-AIHGDLSQQ 385
Query: 472 KNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVS 529
+ S + K A +++ ++ L+ + VI F +++++YV + R +
Sbjct: 386 QRSQALNEFKTGASNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQT 445
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL-CHT 568
G H+ FT+ + AG ++ +L Q VP+ L+ HT
Sbjct: 446 GTAHTLFTEQEKHLAGALVNVLNGANQPVPEELKKFGTHT 485
>gi|332020302|gb|EGI60733.1| Putative ATP-dependent RNA helicase DDX5 [Acromyrmex echinatior]
Length = 570
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 161/401 (40%), Gaps = 52/401 (12%)
Query: 188 NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADS 243
N +R G + + W I S +D+ + +GS T+ I A +
Sbjct: 127 NEIRRQGFGEPTAIQAQGWPIAL-----SGRDMVGIAQTGSGKTLAYILPAIVHINHQPR 181
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQI 299
++R + GP L L ++E A +++ V FG + + GA Q
Sbjct: 182 LSRND-------GPIALILAPTRELAQQIQQVAS---DFGMSSQVRNTCIFGGAPKGPQA 231
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-K 358
L E ++TP RL+ + ++ + LV+D D + IR+ + +
Sbjct: 232 RDLERGV-EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIR 290
Query: 359 PHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL 415
P T+ V+NL L ++++ + + I+Q V+VC + EK
Sbjct: 291 PDRQTLMWSATWPK--EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVC-EEYEKES 347
Query: 416 KGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNC 466
K +++L+ +EP K + V K ++ + G+ +
Sbjct: 348 KLMKLLEE-----ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDY 402
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+++ +NS R A+ + ++E+ + VI D+ + ++YV + R
Sbjct: 403 VLNQFRNS-------RSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRS 455
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+G ++FFT +A AG +I++LE+ QVV L DL
Sbjct: 456 QRTGTAYAFFTPGNAHKAGDLIQVLEEAKQVVNPKLYDLSR 496
>gi|302892891|ref|XP_003045327.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726252|gb|EEU39614.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 596
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 159/370 (42%), Gaps = 32/370 (8%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W SA+D++ +GS T+ A A +I K + P + + +
Sbjct: 207 WPFTLSARDVIGVAETGSGKTMA-FALPCVEAVSAIGGKSTKAV-IVSPTRELAMQTHTQ 264
Query: 269 AAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
A+V ++ G+ V L GA+ D Q LR + +V+TP RL +S +D+
Sbjct: 265 MAQVAALN------GLKCVCLFGGASKDDQRAQLRRGA-DIIVATPGRLKDFMSDDTVDL 317
Query: 329 SGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFN-------DCLTYTSVPAV 376
S + +V+D D + I+Q + P T++F L + + +
Sbjct: 318 SQAAFVVLDEADRMLDKGFEEDIKQILGSCPPREQRQTLMFTATWPQSVQALASSFMVSP 377
Query: 377 QNLLLGSINRLSLNQSVASQS-ACIIQSVNVCASDEEKILKGIQVL-DHAYGDHFHSEPL 434
+ +GS + + +V Q+ A I QSV V EK + +Q+L +H G + L
Sbjct: 378 VKITIGSSGKETAGGAVELQANARISQSVEVL-EPREKEFRLLQLLKEHQQGKQKNDRIL 436
Query: 435 KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHIS 494
+ ++ +N +S KG + G + + + + + K ++ ++
Sbjct: 437 VFCLYKKEATRVENFLSR---KGVRVC-GIHGDLRQEQRTKSLEAFKTGVTPVLVATDVA 492
Query: 495 TAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILE 552
L+ E ++VI F +++++YV + R +G +FFT +D +H+G ++ IL
Sbjct: 493 ARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGQAITFFTVEDKSHSGSLVNILR 552
Query: 553 QCGQVVPDAL 562
Q VP+ L
Sbjct: 553 GANQPVPEDL 562
>gi|256088559|ref|XP_002580398.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1476
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 24/321 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ K L +A V ++ G I QI L+ E +V TP
Sbjct: 855 GPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGA-EIIVCTP 913
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ +++ V+ + S +V+D D + G ++R + +P T++F+
Sbjct: 914 GRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIENCRPDRQTLMFS--- 970
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACI--IQSVNVCASDEEKILKGIQVLDHAYG 426
+ P +L + L + + +S ++ S+EEK+ K +++L
Sbjct: 971 --ATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYKVLELLG---- 1024
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ E VL V K L+ L GY + I + ++SV D KR +
Sbjct: 1025 --IYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDF-KRGNIR 1081
Query: 487 MIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++++V ++ ++YV R G ++F T D A
Sbjct: 1082 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1141
Query: 545 GQMIEILEQCGQVVPDALRDL 565
G ++ +Q GQ P+ L ++
Sbjct: 1142 GDVVRAFKQSGQKPPEELMNM 1162
>gi|256088557|ref|XP_002580397.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1500
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 24/321 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ K L +A V ++ G I QI L+ E +V TP
Sbjct: 879 GPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGA-EIIVCTP 937
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ +++ V+ + S +V+D D + G ++R + +P T++F+
Sbjct: 938 GRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIENCRPDRQTLMFS--- 994
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACI--IQSVNVCASDEEKILKGIQVLDHAYG 426
+ P +L + L + + +S ++ S+EEK+ K +++L
Sbjct: 995 --ATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYKVLELLG---- 1048
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ E VL V K L+ L GY + I + ++SV D KR +
Sbjct: 1049 --IYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDF-KRGNIR 1105
Query: 487 MIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++++V ++ ++YV R G ++F T D A
Sbjct: 1106 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1165
Query: 545 GQMIEILEQCGQVVPDALRDL 565
G ++ +Q GQ P+ L ++
Sbjct: 1166 GDVVRAFKQSGQKPPEELMNM 1186
>gi|402078084|gb|EJT73433.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1218
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 145/326 (44%), Gaps = 31/326 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ CKP LKA G+ V + G I QI L+ E +V+T
Sbjct: 662 GPIGLILTPTRELAVQIFRDCKPFLKALGLRAVCAYGGPPIKDQIADLKRGA-EIVVATT 720
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + + + + +V+D D + G + + + +P TV+F+
Sbjct: 721 GRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVTKILGNARPDLQTVLFS--- 777
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL--KGIQVLDHAYG 426
++P + + L+ + + + V +S + + EEK + +++L Y
Sbjct: 778 --ATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVEIREEKTKFNRLLELLGALYV 835
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAV 485
D + ++ L V + K L+ L KG+ C+ H K+ V+ D
Sbjct: 836 D---DDDVRALVFVERQEKADELLRELLHKGW------GCMSLHGGKDQVDRDSTISDFK 886
Query: 486 SMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S + I+T+ ++++ ++V+ D +++YV R +G +F T++
Sbjct: 887 SGVCPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEE 946
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDL 565
A + LEQ GQ VP+ L ++
Sbjct: 947 QENCAMGIARALEQSGQPVPERLVEM 972
>gi|449265651|gb|EMC76814.1| putative ATP-dependent RNA helicase DDX17, partial [Columba livia]
Length = 481
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 133/314 (42%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 148 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 206
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 207 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 266
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 267 VRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 323
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + R A +I D
Sbjct: 324 --KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 381
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++I++L
Sbjct: 382 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 441
Query: 552 EQCGQVVPDALRDL 565
E+ Q + L L
Sbjct: 442 EEANQAINPKLMQL 455
>gi|154300880|ref|XP_001550854.1| hypothetical protein BC1G_10578 [Botryotinia fuckeliana B05.10]
gi|160380613|sp|A6SCT6.1|DBP3_BOTFB RecName: Full=ATP-dependent RNA helicase dbp3
Length = 592
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 144/318 (45%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAK-VRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A + + K KA G+ V ++ G D QI L++ + +V+TP
Sbjct: 248 GPRAVVVSPTRELAMQSYEQIVKLAKASGLECVCVYGGVPKDEQIRALKTAD--IVVATP 305
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSIS-----GKPHTVVFNDCLT 369
RL L++ D+S +V+D D + IR+ I+ GK T++F
Sbjct: 306 GRLNDLINQGCADLSKARYVVLDEADRMLDKGFEEEIRKIINTTPSLGKRQTLMFTATWP 365
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQ---SACIIQSVNVCASDEEKILKGIQVLDHAYG 426
SV + + S ++++ + ++ I+Q V V +K + +Q+L
Sbjct: 366 -ESVRELAATFMTSPVKIAIGDNPTGDLRANSRIVQKVEVV-EPRDKEYRLMQLLKQYQS 423
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ + V + K++ + S ++ KG+ ++ G + +S + + + K
Sbjct: 424 GSQKDDRILVFCLYKKEA--TRVESFIRQKGFRVA-GIHGDLSQEQRTRSLEAFKSGNTP 480
Query: 487 MIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++VI F +++++YV + R G+ + FT+ D A +
Sbjct: 481 VLVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLFTEHDKAQS 540
Query: 545 GQMIEILEQCGQVVPDAL 562
G +I +L+ Q VPD L
Sbjct: 541 GALINVLKAANQPVPDEL 558
>gi|169769538|ref|XP_001819239.1| ATP-dependent RNA helicase dbp3 [Aspergillus oryzae RIB40]
gi|91206543|sp|Q2UMH8.1|DBP3_ASPOR RecName: Full=ATP-dependent RNA helicase dbp3
gi|83767097|dbj|BAE57237.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 498
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 158/366 (43%), Gaps = 27/366 (7%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W + +D++ +GS T+ + DS K+K P + + ++E
Sbjct: 111 WPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKP----YRPLAVIISPTREL 166
Query: 269 AAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ + K + G+ + G + Q L++ +V+TP RL L + ++D
Sbjct: 167 AMQIYDQLLKFSGSVGVRVACVFGGVRKEEQREALKTAG--VVVATPGRLKDLQNDGSVD 224
Query: 328 VSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---L 380
+ V LV+D D L KG D +IR K T++F T T P+V++L
Sbjct: 225 LGKVKYLVLDEADRMLDKGFEQDIKDIIRPMPVSKRQTIMF----TATWPPSVRDLASTF 280
Query: 381 LGSINRLSL--NQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLY 438
+ S +++ + S ++ I+ V EK + +Q+L+ + EP KVL
Sbjct: 281 MSSPVTVTIGGDPSADPRANTRIKQVVEVVKPHEKESRLVQLLNRS--QRGVPEPEKVLA 338
Query: 439 IVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAEL 498
+ + L+ KG+ ++ G + +S + D K A +++ ++ L
Sbjct: 339 FCLYKKEAMRIERLLRTKGFKVA-GIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGL 397
Query: 499 EEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
+ V VI F +++++YV + R G + FT+ D A +G +I +L Q
Sbjct: 398 DIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLFTETDKAQSGALINVLRAAKQ 457
Query: 557 VVPDAL 562
+P+ L
Sbjct: 458 DIPEDL 463
>gi|414881885|tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 711
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 38/328 (11%)
Query: 256 GPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A ++ K ++ I L+ GA Q+ L R + +V+T
Sbjct: 222 GPTVLVLAPTRELATQILDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGVD--VVVAT 279
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS- 372
P RL ++ ++ + + VS LV+D D + IR+ + PH L YT+
Sbjct: 280 PGRLNDILEMRKVSLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPHR---RQTLMYTAT 336
Query: 373 -------------VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ 419
V VQ + +GS++ L N S+ I S EK + Q
Sbjct: 337 WPKEVRRIADDLLVHPVQ-VTIGSVDSLVANSSITQHVEIITPS--------EKQRRLEQ 387
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSISTGSNCIVSHIKNSVEAD 478
+L K+L L TL + G S G K +
Sbjct: 388 IL------RSQDSGSKILIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLNQFR 441
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ P + D ++++ VVI DF +++YV + R +G+ ++FF
Sbjct: 442 SGRSPILVATDV-AARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCD 500
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
D+ +A +I+ILE Q VP L D+
Sbjct: 501 QDSKYAADLIKILEGANQRVPRDLEDMA 528
>gi|330804914|ref|XP_003290434.1| hypothetical protein DICPUDRAFT_37328 [Dictyostelium purpureum]
gi|325079445|gb|EGC33045.1| hypothetical protein DICPUDRAFT_37328 [Dictyostelium purpureum]
Length = 600
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 32/321 (9%)
Query: 260 LFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
L + ++E A ++ S CK K G+ ++ GA+I QI L+ + +V TP R++
Sbjct: 104 LIMSPTRELALQIFSECKKFTKNLGLRVACIYGGASISEQIADLKRGA-DIVVCTPGRMI 162
Query: 319 KLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS 372
++ + + ++ V+ LV+D R+ + G + + +I T++F+
Sbjct: 163 DILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQIMCVIDNIRPDRQTIMFSATFPPKV 222
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
A + +L + ++ +S+ S I Q V V S E + + I++L Y
Sbjct: 223 ENAAKKILTKPLEIIAGGRSIVSSD--IDQHVEVRPS-ETRFRRLIELLSLWYHKG---- 275
Query: 433 PLKVLYIVGK----DSKFQNLVST----LKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
++L + D+ F+ L S+ L G T + ++ KN V+ P
Sbjct: 276 --QILIFTNRQETTDNLFRQLASSQYQCLSLHGSKDQTDRDETITDFKNKVKTILIATPL 333
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
S ++++ +V+ D +++YV + R G ++F T ++ ++
Sbjct: 334 AS-------RGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNKGTAYTFITPEEERYS 386
Query: 545 GQMIEILEQCGQVVPDALRDL 565
+I+ LEQ G VPD L+ L
Sbjct: 387 PSIIKALEQSGSKVPDELKKL 407
>gi|224141279|ref|XP_002324002.1| predicted protein [Populus trichocarpa]
gi|222867004|gb|EEF04135.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 160/382 (41%), Gaps = 49/382 (12%)
Query: 218 KDILETSGSSSTIVQI-AWIVATAADSIARKEKEGFSFT--------------------G 256
K++L+ SS T +Q +W VA + I K G T G
Sbjct: 167 KEVLKAGFSSPTPIQAQSWPVALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRCRNDPQLG 226
Query: 257 PFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P +L L ++E A +++ K K+ I L+ GA Q+ L + +V+TP
Sbjct: 227 PTVLVLSPTRELATQIQDEAVKFGKSSRISCTCLYGGAPKGPQLKELDRGA-DIVVATPG 285
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYTS 372
RL ++ ++ + ++ V LV+D D + IR+ + P T+++
Sbjct: 286 RLNDILEMRRVSLNQVKYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEV 345
Query: 373 VPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHAY 425
+LL+ + N ++++ VA++S I Q V + A E E+IL+
Sbjct: 346 RKIAADLLVNPVQVNIGNIDELVANKS--ITQHVELLAPLEKHRRLEQILRS-------- 395
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP + I K + ++ + + + ++ V + R +
Sbjct: 396 -----QEPGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQSERDHVLSQFRTGRSP 450
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ D + ++++ VV+ DF +++YV + R +G+ ++FF DA +A
Sbjct: 451 ILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKYA 510
Query: 545 GQMIEILEQCGQVVPDALRDLC 566
+I++LE Q+VP +R +
Sbjct: 511 SDLIKVLEGANQLVPPEIRAMA 532
>gi|115468814|ref|NP_001058006.1| Os06g0602400 [Oryza sativa Japonica Group]
gi|113596046|dbj|BAF19920.1| Os06g0602400, partial [Oryza sativa Japonica Group]
Length = 484
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 145/342 (42%), Gaps = 15/342 (4%)
Query: 233 IAWIVATAADSIARKEKEGFSFTG--PFLLFLVSSQEKAAKVRSVCKPLK-AFGIHTVSL 289
++ +VA I +E+ F+ P L L ++E AA++ K G+ V
Sbjct: 25 VSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQINEEAKKFSFQTGLRVVVA 84
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLS 349
+ G + +Q+ L + LV+TP RL+ +V + + + LV+D D +
Sbjct: 85 YGGTPMYNQLRDLERGA-DILVATPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEP 143
Query: 350 LIRQSIS--GKPHTVVFNDCL-TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQS 403
IR+ + P V L + T P +Q L L + +++ + V S + I+Q
Sbjct: 144 QIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLSNYIFITVGR-VGSSTDLIMQK 202
Query: 404 VNVCASDEEK--ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461
V + + E++ +L +Q + +PL ++++ K + +L L KG+ +
Sbjct: 203 VELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETK-READSLRYWLYSKGFPAT 261
Query: 462 TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEIL 520
+ S + M+ D S ++ VI D S+++YV +
Sbjct: 262 AIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRI 321
Query: 521 TSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
R +G +FFT+ D + A ++E++ + Q VPD L
Sbjct: 322 GRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPDWL 363
>gi|357130258|ref|XP_003566767.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like
[Brachypodium distachyon]
Length = 828
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 36/328 (10%)
Query: 255 TGPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
+GP +L L ++E A ++ K ++ I + L+ GA Q+ L + +V+T
Sbjct: 229 SGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLERGV-DVVVAT 287
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS- 372
P RL ++ ++ I + VS LV+D D + IR+ + P + L YT+
Sbjct: 288 PGRLNDILEMRKISLKQVSYLVLDEADRMLDMGFEPQIRKIVKDIPSS---RQTLMYTAT 344
Query: 373 -------------VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ 419
V VQ + +GS++ L N+++ I S EK+ + Q
Sbjct: 345 WPKEVRRIADELLVHPVQ-VTIGSVDELVANKAITQHVEVITPS--------EKLRRLEQ 395
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG 479
+L H K+L L TL + + + + + V +
Sbjct: 396 IL------RSHDSGSKILIFCTTKRMCDQLSRTLN-RHFGAAAIHGDKSQNEREKVLSQF 448
Query: 480 RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
R + ++ D + ++++ VVI DF +++YV + R +G+ ++F
Sbjct: 449 RSGRSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGLAYTFLCD 508
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
DA +A +I+ILE Q VP L D+
Sbjct: 509 QDAKYAADLIKILEGADQDVPRELMDMV 536
>gi|215741236|dbj|BAG97731.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 145/342 (42%), Gaps = 15/342 (4%)
Query: 233 IAWIVATAADSIARKEKEGFSFTG--PFLLFLVSSQEKAAKVRSVCKPLK-AFGIHTVSL 289
++ +VA I +E+ F+ P L L ++E AA++ K G+ V
Sbjct: 19 VSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQINEEAKKFSFQTGLRVVVA 78
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLS 349
+ G + +Q+ L + LV+TP RL+ +V + + + LV+D D +
Sbjct: 79 YGGTPMYNQLRDLERGA-DILVATPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEP 137
Query: 350 LIRQSIS--GKPHTVVFNDCL-TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQS 403
IR+ + P V L + T P +Q L L + +++ + V S + I+Q
Sbjct: 138 QIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLSNYIFITVGR-VGSSTDLIMQK 196
Query: 404 VNVCASDEEK--ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461
V + + E++ +L +Q + +PL ++++ K + +L L KG+ +
Sbjct: 197 VELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETK-READSLRYWLYSKGFPAT 255
Query: 462 TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEIL 520
+ S + M+ D S ++ VI D S+++YV +
Sbjct: 256 AIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRI 315
Query: 521 TSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
R +G +FFT+ D + A ++E++ + Q VPD L
Sbjct: 316 GRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPDWL 357
>gi|395538171|ref|XP_003771058.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Sarcophilus
harrisii]
Length = 699
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 214 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 272
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 273 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 332
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 333 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 389
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 390 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 442
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 443 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 502
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 503 LIKVLEEANQAINPKLMQL 521
>gi|213158663|ref|YP_002319961.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB0057]
gi|417574004|ref|ZP_12224858.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC-5]
gi|421642751|ref|ZP_16083263.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-235]
gi|421646857|ref|ZP_16087296.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-251]
gi|421701131|ref|ZP_16140639.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-58]
gi|421802300|ref|ZP_16238253.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC1]
gi|213057823|gb|ACJ42725.1| DEAD/DEAH box helicase [Acinetobacter baumannii AB0057]
gi|400209572|gb|EJO40542.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC-5]
gi|404568185|gb|EKA73291.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-58]
gi|408512203|gb|EKK13849.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-235]
gi|408517003|gb|EKK18554.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-251]
gi|410404097|gb|EKP56170.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC1]
Length = 383
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
TY + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 195 TFTYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 245
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGK 301
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 302 HNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA 360
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 361 FY---LPEIEKAIGKKLP 375
>gi|355750194|gb|EHH54532.1| hypothetical protein EGM_15393, partial [Macaca fascicularis]
Length = 1029
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 172/417 (41%), Gaps = 45/417 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 360 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 411
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI A+++ + ++ E GP + + ++E A ++ CK K
Sbjct: 412 AKTGSGKTI---AFLLPMFRHIMGQRSLE--EGEGPIAVIMTPTRELALQITKECKKFSK 466
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 467 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 525
Query: 338 RLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R ++ TV+F+ + P L I + V
Sbjct: 526 EADRMFDMGFEPQVMRIVDNVHPDRQTVMFS-----ATFPRAMEALTSRILSKPIEVQVG 580
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 581 GRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLL 632
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 633 KDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYS 691
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 692 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 748
>gi|256088555|ref|XP_002580396.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1544
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 24/321 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ K L +A V ++ G I QI L+ E +V TP
Sbjct: 923 GPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGA-EIIVCTP 981
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ +++ V+ + S +V+D D + G ++R + +P T++F+
Sbjct: 982 GRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIENCRPDRQTLMFS--- 1038
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACI--IQSVNVCASDEEKILKGIQVLDHAYG 426
+ P +L + L + + +S ++ S+EEK+ K +++L
Sbjct: 1039 --ATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYKVLELLG---- 1092
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ E VL V K L+ L GY + I + ++SV D KR +
Sbjct: 1093 --IYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDF-KRGNIR 1149
Query: 487 MIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++++V ++ ++YV R G ++F T D A
Sbjct: 1150 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1209
Query: 545 GQMIEILEQCGQVVPDALRDL 565
G ++ +Q GQ P+ L ++
Sbjct: 1210 GDVVRAFKQSGQKPPEELMNM 1230
>gi|303288978|ref|XP_003063777.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454845|gb|EEH52150.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 574
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 137/329 (41%), Gaps = 21/329 (6%)
Query: 257 PFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTP 314
P L + ++E A ++ K A G V+++ GA Q + L R CE +++TP
Sbjct: 212 PLALCMSPTRELALQICAEATKFGAAVGCRAVAVYGGAPKWAQASQLQRGCE--LIIATP 269
Query: 315 ERLLKLVSL------KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFN 365
R+L ++ + ++ +L++D D + IRQ P T++F
Sbjct: 270 GRMLDMLDMHNKGGNPVTSLASAKVLILDEADRMLDMGFEKDIRQIAECMPADRRTMLFT 329
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSA--CIIQSVNVCASDEEKILKGIQVLDH 423
+LL ++++ +A + Q+V V + EK + +++++
Sbjct: 330 ATWPKNVQKIAADLLKPDRVKITVGNGGDKLTANKAVTQTVKVIEA-REKWTEFLKLMEE 388
Query: 424 AYGDH-FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
D H + + + KD + L +GY+ T S + +V A R+
Sbjct: 389 YKKDGPRHGQRVMIFCNTKKD--VNGIGEHLWNEGYAADTVSGDRTQREREAVIAAFRRG 446
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFII-SMKNYVEILTSMARHTVSGILHSFFTKDD 540
++ D + +++ E V+ DF + +Y+ + R G+ H+ FT+ D
Sbjct: 447 STTMVVCTDVAARGIDVQGVEAVVNYDFPRDACDDYIHRIGRTGRAGAKGVAHTLFTRQD 506
Query: 541 AAHAGQMIEILEQCGQVVPDALRDLCHTS 569
A ++ ILE Q VPD LR L +S
Sbjct: 507 GRFAKELTRILEDADQTVPDELRALAASS 535
>gi|222624792|gb|EEE58924.1| hypothetical protein OsJ_10575 [Oryza sativa Japonica Group]
Length = 696
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 156/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 181 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG-----PIGVVCAPTRELAHQIY 235
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L++ CE +++TP RL+ L+ +KA+ +
Sbjct: 236 LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE--IVIATPGRLIDLLKMKALKMFRA 293
Query: 332 SLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + IR SI G +P T++F+ + Y + +L I R+
Sbjct: 294 TYLVLDEADRMFDLGFEPQIR-SIVGQIRPDRQTLLFSATMPYKVERLAREILTDPI-RV 351
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V S + I Q VNV SD EK+ ++ L D VL K ++
Sbjct: 352 TVGQ-VGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDG------DVLVFAAKKARVD 404
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ S L +G+ I+ DKD S E + Y
Sbjct: 405 EIESQLNQRGFRIAALHG-----------------------DKDQASRMETLQKFKSGVY 441
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ +
Sbjct: 442 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVR 501
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG+++ L GQ VP+ L DL
Sbjct: 502 FAGELVHCLIAAGQDVPNELMDLA 525
>gi|108742054|gb|AAI17661.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 10/317 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 168 GPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 226
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ + +P T+
Sbjct: 227 GRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 286
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +E K K IQ+++ + +
Sbjct: 287 VRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENE-KDNKLIQLMEEIMAEKEN-- 343
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + L ++ G+ ++ V + R A +I D
Sbjct: 344 --KTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDV 401
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++ +L
Sbjct: 402 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVL 461
Query: 552 EQCGQVVPDALRDLCHT 568
E+ Q + L L T
Sbjct: 462 EEARQAINPKLLQLVDT 478
>gi|159154994|gb|AAI54494.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 10/317 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 168 GPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 226
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ + +P T+
Sbjct: 227 GRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 286
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +E K K IQ+++ + +
Sbjct: 287 VRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENE-KDNKLIQLMEEIMAEKEN-- 343
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + L ++ G+ ++ V + R A +I D
Sbjct: 344 --KTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDV 401
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++ +L
Sbjct: 402 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVL 461
Query: 552 EQCGQVVPDALRDLCHT 568
E+ Q + L L T
Sbjct: 462 EEARQAINPKLLQLVDT 478
>gi|145491061|ref|XP_001431530.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398635|emb|CAK64132.1| unnamed protein product [Paramecium tetraurelia]
Length = 532
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 153/357 (42%), Gaps = 29/357 (8%)
Query: 224 SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRS-VCKPLKAF 282
+GS TI A+++ I + K+G GP +L LV ++E A +++ + +A+
Sbjct: 117 TGSGKTI---AYLLPGLV-HIESQRKKG----GPMMLILVPTRELAMQIQEHISYFSEAY 168
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
+++ ++ GA Q L + +P+ +V+TP RL+ + + ++ V+ LV+D D +
Sbjct: 169 NMNSACIYGGADKRPQEMAL-ARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLDEADRM 227
Query: 343 SKGDTLSLIRQ---SISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSAC 399
+R+ I TV F+ T VQNL + +N + SQ
Sbjct: 228 LDMGFEQQVRKIDSYIREDRQTVFFSATWPKT----VQNLACDLCHNEPINLYIGSQEVT 283
Query: 400 IIQSV---NVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK 456
I +++ +C EK + + +L+ S KVL V ++L S L
Sbjct: 284 INKNITQETICLYQNEKQEELLYILEEL------SNKDKVLIFVETKKDCEDLASYLSEH 337
Query: 457 GYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKN 515
G+ + ++ V + + + D S ++ + +VI DF + N
Sbjct: 338 GFFCMSLHGDKTQQQRDYVMKEFKASKCKLLCATDVASRGLDVRDISLVINYDFPNQIDN 397
Query: 516 YVEILTSMARHTVSGILHSFFTKD--DAAHAGQMIEILEQCGQVVPDALRDLCHTSP 570
YV + R G + T D D A Q++++L+ QVV D L D ++ P
Sbjct: 398 YVHRIGRTGRAGDKGRSITMITLDAMDPRVAKQLVDLLKDSEQVVNDDLYDFAYSKP 454
>gi|453089161|gb|EMF17201.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1160
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 25/327 (7%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
+ GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V
Sbjct: 580 NLEGPIGLIMAPTRELAVQIHRECKPYLKALNLRGVCAYGGAPIKDQIAELKRGA-EVVV 638
Query: 312 STPERLLKLVSL---KAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFN 365
TP RL+ L++ + ++ V+ +V+D D + I++ + +P TV+F+
Sbjct: 639 CTPGRLIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQIQRVLGNVRPDRQTVLFS 698
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ L I L +SV +A I Q V V S++ K + +++L +
Sbjct: 699 ATFPKKMESLARKALNKPIEILVGGRSVV--AAEITQIVEV-RSEDTKFRRVLELLGNL- 754
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR----K 481
H E + L V + +L L KGY S+ V + ++ D K
Sbjct: 755 --HEGDEDARSLIFVERQETSDHLFKELNKKGY-----SSVSVHGGREQIDRDAAILDFK 807
Query: 482 RPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
AV ++ ++ L+ + ++VI D ++YV R +G +F T +
Sbjct: 808 AGAVPIMVATSVAARGLDVKQLKLVINYDSPNHGEDYVHRAGRTGRAGNTGTAVTFVTPE 867
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLC 566
A ++ LE Q VP+ L+++
Sbjct: 868 QEHFAPFLVRCLEDSKQDVPETLKEMA 894
>gi|390458842|ref|XP_002743821.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Callithrix
jacchus]
Length = 652
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|149065924|gb|EDM15797.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Rattus
norvegicus]
gi|344257977|gb|EGW14081.1| putative ATP-dependent RNA helicase DDX17 [Cricetulus griseus]
Length = 652
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|30353749|gb|AAH51703.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapiens]
Length = 631
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 140/321 (43%), Gaps = 33/321 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A V + C G+ ++ ++ G + QI + S + +++TP
Sbjct: 296 GPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDI-SKGVDIIIATPG 354
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI------------SGKPHTVV 363
RL L ++++ ++ LV+D D + + IR+ + S V
Sbjct: 355 RLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTV 414
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
L+Y P + + +G++N +++N + Q++ V E++ L V +
Sbjct: 415 RQLALSYLKDPMI--VYVGNLNLVAVN--------TVKQNIIVTTEKEKRALTQEFVENM 464
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKR 482
+ D KV+ V + +L S +G S S N S + +VE D +
Sbjct: 465 SPND-------KVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVE-DFKSG 516
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I D +S +L + V DF ++ YV + + R +G + T+ D+
Sbjct: 517 NIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDS 576
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
AG++I+IL++ Q VP+ L
Sbjct: 577 KMAGELIKILDRANQSVPEDL 597
>gi|238502010|ref|XP_002382239.1| ATP-dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220692476|gb|EED48823.1| ATP-dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 498
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 158/366 (43%), Gaps = 27/366 (7%)
Query: 211 WKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W + +D++ +GS T+ + DS K+K P + + ++E
Sbjct: 111 WPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKP----YRPLAVIISPTREL 166
Query: 269 AAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ + K + G+ + G + Q L++ +V+TP RL L + ++D
Sbjct: 167 AMQIYDQLLKFSGSVGVRMACVFGGVRKEEQREALKTAG--VVVATPGRLKDLQNDGSVD 224
Query: 328 VSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---L 380
+ V LV+D D L KG D +IR K T++F T T P+V++L
Sbjct: 225 LGKVKYLVLDEADRMLDKGFEQDIKDIIRPMPVSKRQTIMF----TATWPPSVRDLASTF 280
Query: 381 LGSINRLSL--NQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLY 438
+ S +++ + S ++ I+ V EK + +Q+L+ + EP KVL
Sbjct: 281 MSSPVTVTIGGDPSADPRANTRIKQVVEVVKPHEKESRLVQLLNRS--QRGVPEPEKVLA 338
Query: 439 IVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAEL 498
+ + L+ KG+ ++ G + +S + D K A +++ ++ L
Sbjct: 339 FCLYKKEAMRIERLLRTKGFKVA-GIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGL 397
Query: 499 EEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
+ V VI F +++++YV + R G + FT+ D A +G +I +L Q
Sbjct: 398 DIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLFTETDKAQSGALINVLRAAKQ 457
Query: 557 VVPDAL 562
+P+ L
Sbjct: 458 DIPEDL 463
>gi|141796059|gb|AAI34864.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 10/317 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 168 GPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 226
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ + +P T+
Sbjct: 227 GRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 286
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +E K K IQ+++ + +
Sbjct: 287 VRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENE-KDNKLIQLMEEIMAEKEN-- 343
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + L ++ G+ ++ V + R A +I D
Sbjct: 344 --KTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDV 401
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++ +L
Sbjct: 402 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVL 461
Query: 552 EQCGQVVPDALRDLCHT 568
E+ Q + L L T
Sbjct: 462 EEARQAINPKLLQLVDT 478
>gi|162459683|ref|NP_001105241.1| DEAD box RNA helicase1 [Zea mays]
gi|39653663|gb|AAR29370.1| DEAD box RNA helicase [Zea mays]
Length = 566
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 136/318 (42%), Gaps = 12/318 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ ++ + ++ GA QI LR E +++TP
Sbjct: 223 GPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGV-EIVIATP 281
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ ++ ++ V+ LV+D D + IR+ ++ +P T+
Sbjct: 282 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPRE 341
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V A+ L + ++ + + I Q V V SD E I +++L D
Sbjct: 342 VEALARQFLQNPYKVIIGSPELKANHSIQQIVEVI-SDHESIQDSVKLLS----DLMDGS 396
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
+ + KD + L+ G+ + ++ V A+ + + M D
Sbjct: 397 RILIFLQTKKDC--DKITRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDV 454
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++++ + VI DF ++++Y+ + R SG +FFT +A + +++IL
Sbjct: 455 AARGLDVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTHANAKFSRNLVKIL 514
Query: 552 EQCGQVVPDALRDLCHTS 569
+ GQVV AL + +S
Sbjct: 515 REAGQVVNPALESMSRSS 532
>gi|360044201|emb|CCD81748.1| unnamed protein product [Schistosoma mansoni]
Length = 1328
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 24/321 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ K L +A V ++ G I QI L+ E +V TP
Sbjct: 707 GPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGA-EIIVCTP 765
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ +++ V+ + S +V+D D + G ++R + +P T++F+
Sbjct: 766 GRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIENCRPDRQTLMFS--- 822
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACI--IQSVNVCASDEEKILKGIQVLDHAYG 426
+ P +L + L + + +S ++ S+EEK+ K +++L
Sbjct: 823 --ATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYKVLELLG---- 876
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ E VL V K L+ L GY + I + ++SV D KR +
Sbjct: 877 --IYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDF-KRGNIR 933
Query: 487 MIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ ++++V ++ ++YV R G ++F T D A
Sbjct: 934 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 993
Query: 545 GQMIEILEQCGQVVPDALRDL 565
G ++ +Q GQ P+ L ++
Sbjct: 994 GDVVRAFKQSGQKPPEELMNM 1014
>gi|143456452|sp|Q0DB53.2|RH52A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 52A
gi|51090883|dbj|BAD35456.1| putative DEAD-box protein 3 [Oryza sativa Japonica Group]
gi|222635845|gb|EEE65977.1| hypothetical protein OsJ_21891 [Oryza sativa Japonica Group]
Length = 602
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 145/342 (42%), Gaps = 15/342 (4%)
Query: 233 IAWIVATAADSIARKEKEGFSFTG--PFLLFLVSSQEKAAKVRSVCKPLK-AFGIHTVSL 289
++ +VA I +E+ F+ P L L ++E AA++ K G+ V
Sbjct: 143 VSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQINEEAKKFSFQTGLRVVVA 202
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLS 349
+ G + +Q+ L + LV+TP RL+ +V + + + LV+D D +
Sbjct: 203 YGGTPMYNQLRDLERGA-DILVATPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEP 261
Query: 350 LIRQSIS--GKPHTVVFNDCL-TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQS 403
IR+ + P V L + T P +Q L L + +++ + V S + I+Q
Sbjct: 262 QIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLSNYIFITVGR-VGSSTDLIMQK 320
Query: 404 VNVCASDEEK--ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIS 461
V + + E++ +L +Q + +PL ++++ K + +L L KG+ +
Sbjct: 321 VELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETK-READSLRYWLYSKGFPAT 379
Query: 462 TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEIL 520
+ S + M+ D S ++ VI D S+++YV +
Sbjct: 380 AIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRI 439
Query: 521 TSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
R +G +FFT+ D + A ++E++ + Q VPD L
Sbjct: 440 GRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPDWL 481
>gi|156554399|ref|XP_001604593.1| PREDICTED: ATP-dependent RNA helicase p62-like [Nasonia
vitripennis]
Length = 551
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/386 (18%), Positives = 154/386 (39%), Gaps = 24/386 (6%)
Query: 189 AMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSI 244
++ G + P+ W I S K++ + +GS T+ I A + + +
Sbjct: 139 GIKKQGYSEPTPIQAQGWPIAM-----SGKNMVGIAQTGSGKTLAYILPAIVHINSQQPL 193
Query: 245 ARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLR 303
R + GP L L ++E A ++++V + + + GA Q L
Sbjct: 194 NRGD-------GPIALILAPTRELAQQIQTVASDFGSLSYVRNTCIFGGAPKGGQARDLE 246
Query: 304 SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTV 362
E +++TP RL+ + ++ + LV+D D + IR+ I +P
Sbjct: 247 RGV-EIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 305
Query: 363 VFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVL 421
V T+ V + L +L++ + + I+Q ++VC E++ G +
Sbjct: 306 VLMWSATWPKEVRMLAEEYLVDYTQLNIGSLQLAANHNILQIIDVCQEQEKETKLGTLLQ 365
Query: 422 DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRK 481
+ + + + K + V K +N+ ++ G+ ++ V + R
Sbjct: 366 EIG---NVNDDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQQERDYVLREFRN 422
Query: 482 RPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
+ ++ D + ++++ VI D+ S ++Y+ + R SG ++FFT +
Sbjct: 423 KKGSILVATDVAARGLDVDDVRYVINFDYPSSSEDYIHRIGRTGRSQSSGTSYAFFTPQN 482
Query: 541 AAHAGQMIEILEQCGQVVPDALRDLC 566
A +I +L + Q++ L +L
Sbjct: 483 GRQAKDLINVLREANQIINPKLSELA 508
>gi|444717657|gb|ELW58482.1| putative ATP-dependent RNA helicase DDX17 [Tupaia chinensis]
Length = 653
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 166 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 224
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 225 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 284
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 285 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 341
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 342 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 394
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 395 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 454
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 455 LIKVLEEANQAINPKLMQL 473
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 156/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG-----PIGVVCAPTRELAHQIY 309
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L++ CE +++TP RL+ L+ +KA+ +
Sbjct: 310 LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE--IVIATPGRLIDLLKMKALKMFRA 367
Query: 332 SLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + IR SI G +P T++F+ + Y + +L I R+
Sbjct: 368 TYLVLDEADRMFDLGFEPQIR-SIVGQIRPDRQTLLFSATMPYKVERLAREILTDPI-RV 425
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V S + I Q VNV SD EK+ ++ L D VL K ++
Sbjct: 426 TVGQ-VGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDG------DVLVFAAKKARVD 478
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ S L +G+ I+ DKD S E + Y
Sbjct: 479 EIESQLNQRGFRIAALHG-----------------------DKDQASRMETLQKFKSGVY 515
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ +
Sbjct: 516 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVR 575
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG+++ L GQ VP+ L DL
Sbjct: 576 FAGELVHCLIAAGQDVPNELMDLA 599
>gi|426235909|ref|XP_004011920.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Ovis aries]
Length = 643
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 144/326 (44%), Gaps = 43/326 (13%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ +V ++ G D QI L S + +++TP
Sbjct: 310 GPGMLVLTPTRELALQVDAECSEYSYRGLKSVCIYGGGDRDGQIKDL-SKGVDIIIATPG 368
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP--HTVVFNDCLTYTS 372
RL L + + ++ LV+D D L G +++ + +P TV+ + Y
Sbjct: 369 RLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPYAV 428
Query: 373 VPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
Q+ L +G+++ +++ + + Q++ V DE++ IQ +
Sbjct: 429 RRLAQSYLKEPMIVYVGTLDLVAV--------STVTQNIIVTTEDEKR--SHIQAFIESM 478
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP-- 483
S KV+ V + + +L S L + S+ + + + E R+R
Sbjct: 479 -----SPKDKVIIFVSRKAVADHLSSDLGIRRISVES--------LHGNREQSDRERALK 525
Query: 484 -----AVSMIDKDHISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFF 536
V ++ +++ L+ ++V V DF +++ YV + R +G+ +
Sbjct: 526 SFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLI 585
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDAL 562
T++D AG++I ILE+ Q VP+ L
Sbjct: 586 TRNDWKIAGELINILERANQSVPEDL 611
>gi|45709415|gb|AAH67878.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapiens]
Length = 631
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 140/321 (43%), Gaps = 33/321 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A V + C G+ ++ ++ G + QI + S + +++TP
Sbjct: 296 GPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDI-SKGVDIIIATPG 354
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI------------SGKPHTVV 363
RL L ++++ ++ LV+D D + + IR+ + S V
Sbjct: 355 RLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTV 414
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
L+Y P + + +G++N +++N + Q++ V E++ L V +
Sbjct: 415 RQLALSYLKDPMI--VYVGNLNLVAVN--------TVKQNIIVTTEKEKRALTQEFVENM 464
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKR 482
+ D KV+ V + +L S +G S S N S + +VE D +
Sbjct: 465 SPND-------KVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVE-DFKSG 516
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I D +S +L + V DF ++ YV + + R +G + T+ D+
Sbjct: 517 NIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDS 576
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
AG++I+IL++ Q VP+ L
Sbjct: 577 KMAGELIKILDRANQSVPEDL 597
>gi|222640112|gb|EEE68244.1| hypothetical protein OsJ_26445 [Oryza sativa Japonica Group]
Length = 2897
Score = 55.5 bits (132), Expect = 7e-05, Method: Composition-based stats.
Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 44/330 (13%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A++++ K ++ + L+ G + Q+ L + +V+TP
Sbjct: 675 GPTVLVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELER-GADIVVATP 733
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS-- 372
RL ++ ++ I + VS LV+D D + IR+ + P L YT+
Sbjct: 734 GRLNDILEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRN---RQTLMYTATW 790
Query: 373 ---VPAVQNLLLG---SINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVLDHAY 425
V + LL +N S+++ VA++S I Q V V D+++ L+
Sbjct: 791 PKEVTKIAGDLLKDPVQVNIGSIDELVANKS--ITQYVEVVPPLDKQRRLE--------- 839
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI---KNSVEADG-- 479
++L + SK ST K C + G + + I K+ E D
Sbjct: 840 ---------QILRAQERGSKVIIFCSTKKMCDQLARDIGRSFGAASIHGDKSQAERDNVL 890
Query: 480 ---RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
R A ++ D + ++++ VVI DF +++YV + R +G+ ++F
Sbjct: 891 NQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTF 950
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
F++ D +AG ++++LE Q VP L+++
Sbjct: 951 FSEQDWKYAGDLVKVLEGANQHVPPELQEM 980
>gi|93587673|ref|NP_001035277.1| probable ATP-dependent RNA helicase DDX17 isoform 4 [Mus musculus]
gi|76364169|sp|Q501J6.1|DDX17_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17
gi|63146347|gb|AAH96036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Mus musculus]
Length = 650
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|40068493|ref|NP_951062.1| probable ATP-dependent RNA helicase DDX17 isoform 1 [Mus musculus]
gi|74181626|dbj|BAE30078.1| unnamed protein product [Mus musculus]
gi|74220643|dbj|BAE31531.1| unnamed protein product [Mus musculus]
gi|148672698|gb|EDL04645.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Mus
musculus]
Length = 652
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|443713738|gb|ELU06438.1| hypothetical protein CAPTEDRAFT_182934 [Capitella teleta]
Length = 482
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 145/376 (38%), Gaps = 25/376 (6%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFS 253
G +P+ + W I I +T + + + I RK++EG
Sbjct: 56 GFTTPSPIQMQGWPIALQGI--DLIGIAQTGTGKTLAFLLPAFIHIEGQEIPRKDREG-- 111
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
P +L L ++E A ++ S I ++ GA+ QIT ++S E +V+T
Sbjct: 112 ---PTVLVLSPTRELALQIESEVNKYSYKNIKCCCVYGGASRREQITKVKSGV-EIVVAT 167
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTY 370
P RL L++ + + S LV+D D + IR+ I HTV +T
Sbjct: 168 PGRLNDLINANVLSLKNCSYLVLDEADRMLDMGFEPEIRKVLLDIRPDRHTV-----MTS 222
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNV---CASDEEKILKGIQVLDHAYGD 427
+ P L S + + V S + SV +++K + + + H G
Sbjct: 223 ATWPPGVRRLAQSYMKDPIQVFVGSLDLAAVHSVRQQVEIIEEDDKRERLVDFVRHELGP 282
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
KV+ VGK ++ S + + AD + A +
Sbjct: 283 ED-----KVIVFVGKKVLADDISSDFALNDIRCQSIHGDREQCDREQAIADMKDGTARIL 337
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D S ++ + V DF +++ YV + R SG + T+ D ++A
Sbjct: 338 VATDVASRGLDIVDITHVFNYDFPRNIEEYVHRVGRTGRAGRSGTAITLVTRKDWSNAKD 397
Query: 547 MIEILEQCGQVVPDAL 562
+I I+E+ GQ VPD L
Sbjct: 398 LINIMEEAGQEVPDEL 413
>gi|55749865|ref|NP_874358.2| DEAD box protein 53 [Homo sapiens]
gi|143811384|sp|Q86TM3.3|DDX53_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX53; AltName:
Full=Cancer-associated gene protein; AltName:
Full=Cancer/testis antigen 26; Short=CT26; AltName:
Full=DEAD box protein 53; AltName: Full=DEAD box protein
CAGE
gi|119619396|gb|EAW98990.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapiens]
Length = 631
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 140/321 (43%), Gaps = 33/321 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A V + C G+ ++ ++ G + QI + S + +++TP
Sbjct: 296 GPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDI-SKGVDIIIATPG 354
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI------------SGKPHTVV 363
RL L ++++ ++ LV+D D + + IR+ + S V
Sbjct: 355 RLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTV 414
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
L+Y P + + +G++N +++N + Q++ V E++ L V +
Sbjct: 415 RQLALSYLKDPMI--VYVGNLNLVAVN--------TVKQNIIVTTEKEKRALTQEFVENM 464
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKR 482
+ D KV+ V + +L S +G S S N S + +VE D +
Sbjct: 465 SPND-------KVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVE-DFKSG 516
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I D +S +L + V DF ++ YV + + R +G + T+ D+
Sbjct: 517 NIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDS 576
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
AG++I+IL++ Q VP+ L
Sbjct: 577 KMAGELIKILDRANQSVPEDL 597
>gi|297261056|ref|XP_001092491.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Macaca
mulatta]
gi|297708870|ref|XP_002831174.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pongo abelii]
gi|1592565|gb|AAC50787.1| DEAD-box protein p72 [Homo sapiens]
gi|119580650|gb|EAW60246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_f [Homo
sapiens]
Length = 650
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|397501955|ref|XP_003821639.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pan paniscus]
gi|402884232|ref|XP_003905591.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Papio anubis]
gi|410055919|ref|XP_525595.4| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 2 [Pan
troglodytes]
gi|426394473|ref|XP_004063520.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Gorilla
gorilla gorilla]
gi|47678395|emb|CAG30318.1| DDX17 [Homo sapiens]
gi|109451124|emb|CAK54423.1| DDX17 [synthetic construct]
gi|109451702|emb|CAK54722.1| DDX17 [synthetic construct]
gi|119580647|gb|EAW60243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_c [Homo
sapiens]
gi|208967743|dbj|BAG72517.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [synthetic construct]
Length = 652
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|301612200|ref|XP_002935570.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Xenopus (Silurana)
tropicalis]
Length = 943
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 133/317 (41%), Gaps = 16/317 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E ++ S CK KA+ + +V+++ G ++ Q L+ E +V TP
Sbjct: 324 GPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGA-EIVVCTP 382
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTY 370
RL+ V KA ++ V+ LV D D + +R SI+ +P T++F+
Sbjct: 383 GRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVR-SIANHVRPDRQTLLFSATFRK 441
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
+++L+ I + + A++ I Q V + S EK + L
Sbjct: 442 KIEKLARDILVDPIRVVQGDIGEANED--ITQVVEILPSGPEKWTWLTRRLVE------F 493
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
+ VL V K + + L + L+ + + + +N V +D +K+ ++
Sbjct: 494 TSTGSVLIFVTKKANAEELANNLRQDDHPLGLLHGDMDQSERNKVISDFKKKSIPVLVAT 553
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D + ++ + VI D + + + R G+ H+ T D+ AG ++
Sbjct: 554 DVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAHTLLTPKDSNFAGDLVR 613
Query: 550 ILEQCGQVVPDALRDLC 566
LE Q V L DL
Sbjct: 614 NLEGANQYVSKELLDLA 630
>gi|297709568|ref|XP_002831500.1| PREDICTED: probable ATP-dependent RNA helicase DDX53 [Pongo abelii]
Length = 629
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 161/369 (43%), Gaps = 41/369 (11%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQI-AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W D++E +G+ T+ + + + I+R+++ GP +L L ++E
Sbjct: 253 WPIILQGIDLIEVAQTGTGKTLSYLMPGFIHLDSQPISREQR-----NGPGMLVLTPTRE 307
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +V + C G+ ++ ++ G QI + S + +++TP RL L +++
Sbjct: 308 LALQVEAQCSKYSYKGLKSICIYGGRNRIGQIEDI-SKGVDIIIATPGRLNDLQMNNSVN 366
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLI----------RQSI--SGKPHTVVFNDCLTYTSVPA 375
+ ++ LV+D D + + I RQ++ S V L+Y P
Sbjct: 367 LRSITYLVIDEADKMLDMEFEPQIMKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPM 426
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ + +G++N +++N + Q++ V E++ L V + + D K
Sbjct: 427 I--VYVGNLNLVAVN--------TVKQNIIVTTEKEKRALTQEFVENMSPND-------K 469
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKRPAVSMIDKDHIS 494
V+ V + +L S +G S+ S N S + ++E D + +I D +
Sbjct: 470 VIMFVSQKHTADDLSSDFNIQGISVESLHGNTEHSDQERALE-DFKSGNIKILITTDFVP 528
Query: 495 TA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQ 553
+L + V DF +++ YV + + R +G + T+ D+ AG++I+IL++
Sbjct: 529 RGLDLNDVTHVYNYDFPRNIEVYVHRVGYIGRAGKTGTSVTLITQRDSKMAGELIKILDR 588
Query: 554 CGQVVPDAL 562
Q VP+ L
Sbjct: 589 ANQSVPEDL 597
>gi|290994831|ref|XP_002680035.1| ATP-dependent RNA helicase [Naegleria gruberi]
gi|284093654|gb|EFC47291.1| ATP-dependent RNA helicase [Naegleria gruberi]
Length = 629
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 141/318 (44%), Gaps = 29/318 (9%)
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGL-RSCEPEFLVS 312
T P +L + ++E + ++ + G TV + GAAI +Q+ L R C+ LV+
Sbjct: 235 TCPSVLIMAPTRELSTQIYDESRKFTYHTGRRTVVAYGGAAIQYQLKQLERGCD--ILVA 292
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI--SGKPH-----TVVFN 365
TP RL+ L+ +I + V LV+D D + IR + +G P T++F+
Sbjct: 293 TPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMGFEPQIRYIVEKTGMPAPGQRITLMFS 352
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK--ILKGIQVLDH 423
++ L ++N L++ + V S I+Q C DE++ +L+ I +
Sbjct: 353 ATFPKNIQTLARDFLHNNLN-LTVGR-VGSTHENILQKFVYCKDDEKRDLMLEAIASV-- 408
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
E L ++++ K K +++ K S+ + + + + +R
Sbjct: 409 --------ETLTLVFV--KTKKEASILEYFLMKNGFKSSSIHGDKTQRERETALENFRRG 458
Query: 484 AVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
++ +++ L+ +V VI D ++++YV + R +GI SFFT +
Sbjct: 459 ITPILVATDVASRGLDINDVGHVINYDLPENIEDYVHRIGRTGRAGNTGISTSFFTDKNN 518
Query: 542 AHAGQMIEILEQCGQVVP 559
A +I +LE+ Q VP
Sbjct: 519 QIADDLITVLEEAKQEVP 536
>gi|395819770|ref|XP_003783252.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Otolemur
garnettii]
Length = 652
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|157123872|ref|XP_001653950.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882852|gb|EAT47077.1| AAEL001769-PA [Aedes aegypti]
Length = 718
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 145/358 (40%), Gaps = 25/358 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
W S +D+ + +GS T+ I A I + + R + GP L L ++
Sbjct: 132 WSIAMSGRDMVGIAKTGSGKTLAYILPALIHISNQPRLLRGD-------GPIALVLAPTR 184
Query: 267 EKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A +++ VC + I + GA+ Q LR E +++TP RL+ +
Sbjct: 185 ELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQADDLRRGV-EIVIATPGRLIDFLESGT 243
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGS 383
++ + LV+D D + IR+ IS +P V T+ + + L
Sbjct: 244 TNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKLAEEFLRE 303
Query: 384 INRLSLNQSVASQSACIIQSVNVCAS--DEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
++++ + + I+Q + C E ++ K + L GD K + V
Sbjct: 304 YIQINIGSLNLAANENIMQIIECCEEYEKETRLFKLLTELSQQ-GDS------KSIIFVE 356
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
K + + +K G+ ++ V R+ + ++ D S ++++
Sbjct: 357 TKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYVLNTFRRLRSGILVATDVASRGLDVDD 416
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
+ VI DF + ++Y+ + R T G ++FFT + A AG +I +L + Q V
Sbjct: 417 VKYVINFDFPNNTEDYIHRIGRTGRSTNKGTSYTFFTPANGAKAGDLIGVLREANQFV 474
>gi|414881886|tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 802
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 38/328 (11%)
Query: 256 GPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A ++ K ++ I L+ GA Q+ L R + +V+T
Sbjct: 222 GPTVLVLAPTRELATQILDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGVD--VVVAT 279
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS- 372
P RL ++ ++ + + VS LV+D D + IR+ + PH L YT+
Sbjct: 280 PGRLNDILEMRKVSLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPHR---RQTLMYTAT 336
Query: 373 -------------VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ 419
V VQ + +GS++ L N S+ I S EK + Q
Sbjct: 337 WPKEVRRIADDLLVHPVQ-VTIGSVDSLVANSSITQHVEIITPS--------EKQRRLEQ 387
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSISTGSNCIVSHIKNSVEAD 478
+L K+L L TL + G S G K +
Sbjct: 388 IL------RSQDSGSKILIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLNQFR 441
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ P + D ++++ VVI DF +++YV + R +G+ ++FF
Sbjct: 442 SGRSPILVATDV-AARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCD 500
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
D+ +A +I+ILE Q VP L D+
Sbjct: 501 QDSKYAADLIKILEGANQRVPRDLEDMA 528
>gi|335357641|ref|ZP_08549511.1| ATP-dependent RNA helicase [Lactobacillus animalis KCTC 3501]
Length = 418
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL L SQE AA++ +V +P K ++ +SL GA + QI L+ PE ++ TP
Sbjct: 61 GTQLLILAPSQELAAQLTNVIRPWAKLLELNVLSLIGGANVKRQIEKLKK-RPEVVIGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV 373
RLL L++ K + + + +V+D D L + +TL+ R+ I+ P V + + T
Sbjct: 120 GRLLNLINDKKLKLHKLEAIVIDEADELLGEAETLADCREIIAHAPGEVAVS-FFSATKA 178
Query: 374 PAVQNL 379
P + L
Sbjct: 179 PILAEL 184
>gi|332231227|ref|XP_003264799.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1
[Nomascus leucogenys]
Length = 644
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 157 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 215
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 216 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 275
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 276 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 332
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 333 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 385
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 386 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 445
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 446 LIKVLEEANQAINPKLMQL 464
>gi|326491449|dbj|BAJ94202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 38/329 (11%)
Query: 255 TGPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
+GP +L L ++E A ++ K ++ I + L+ GA Q+ L + +V+T
Sbjct: 83 SGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLERGV-DVVVAT 141
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTS- 372
P RL ++ ++ I + VS LV+D D + IR+ + P L YT+
Sbjct: 142 PGRLNDILEMRKISLKQVSYLVLDEADRMLDMGFEPQIRKIVRDIPSG---RQTLMYTAT 198
Query: 373 -------------VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQ 419
V VQ + +GS++ L N+++ I S EK+ + Q
Sbjct: 199 WPKEVRRIADELLVHPVQ-VTIGSVDELVANKAITQHVEVITPS--------EKLRRLEQ 249
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSISTGSNCIVSHIKNSVEAD 478
+L H K+L L TL + G + G + + V +
Sbjct: 250 IL------RSHDSGSKILIFCTTKRMCDQLSRTLNRQFGAAAIHGDKS--QNEREKVLSQ 301
Query: 479 GRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
R A ++ D + ++++ VVI DF +++YV + R +G+ ++F
Sbjct: 302 FRSGRAPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGLAYTFLC 361
Query: 538 KDDAAHAGQMIEILEQCGQVVPDALRDLC 566
D+ +A +I+ILE Q VP L D+
Sbjct: 362 DQDSKYASDLIKILEGADQDVPPELLDMV 390
>gi|66800707|ref|XP_629279.1| hypothetical protein DDB_G0293168 [Dictyostelium discoideum AX4]
gi|74896763|sp|Q54CE0.1|DDX17_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx17; AltName:
Full=DEAD box protein 17
gi|60462734|gb|EAL60936.1| hypothetical protein DDB_G0293168 [Dictyostelium discoideum AX4]
Length = 785
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 167/394 (42%), Gaps = 48/394 (12%)
Query: 194 GVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIV-QIAWIVATAADSIARKEKE 250
G NP + S + W +DI L +GS T+ + IV A + R++
Sbjct: 401 GAGFPNPTPIQS---QAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDD- 456
Query: 251 GFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCE 306
GP +L L ++E A +++ FG I ++ GA+ Q+ L+
Sbjct: 457 -----GPIVLVLAPTRELALQIQEETN---KFGGTSQISNTCVYGGASKHTQVAALKKGV 508
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVV 363
E +++TP RL+ ++ ++ V+ LV+D D + IR+ IS +P T++
Sbjct: 509 -EIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLM 567
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
F+ V A+ + L ++ + + + + + Q V VC D EK + + L
Sbjct: 568 FSATWP-KEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVC-QDFEKKERMLSFLGS 625
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY-SISTGSN-------CIVSHIKNSV 475
D KV+ +L L+ G+ SI N ++S KN +
Sbjct: 626 VGRDE------KVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGM 679
Query: 476 EADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHS 534
MI D S ++++ + V+ DF +++ Y+ + AR SG+ +S
Sbjct: 680 --------VPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYS 731
Query: 535 FFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
T D+A A ++I++L + Q +P L +L T
Sbjct: 732 LLTTDNARLANELIKVLTEAKQKIPIELSNLSVT 765
>gi|32880087|gb|AAP88874.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 17, 72kDa [synthetic
construct]
gi|61372130|gb|AAX43789.1| DEAD box polypeptide 17 [synthetic construct]
gi|61372139|gb|AAX43790.1| DEAD box polypeptide 17 [synthetic construct]
Length = 651
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|333470576|gb|AEF33826.1| DEAD box helicase DDX5 [Cherax quadricarinatus]
Length = 522
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 161/390 (41%), Gaps = 30/390 (7%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIA 245
+R G EQ P+ W I +D + +GS T+ I A + +
Sbjct: 103 IRRQGYEQPTPIQGQGWPISL-----QGRDFVGIAQTGSGKTLGYILPAIVHINHQPYLE 157
Query: 246 RKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS 304
R + GP L L ++E A ++ +V + + I + + GA QI L
Sbjct: 158 RGD-------GPIALILAPTRELAQQILTVAQDYGTSSKIRSTCVFGGAPKGPQIRDLER 210
Query: 305 CEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVV 363
E ++TP RL+ + ++ + LV+D D + + IR+ + +P
Sbjct: 211 GV-EICIATPGRLIDFLEAGKTNLRRTTYLVLDEADCMMEMGFEPQIRKIVDQIRPDRQT 269
Query: 364 FNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQV 420
T+ V+NL L +L++ + + I+Q V+VC + EK K Q+
Sbjct: 270 LMWSATWPK--EVRNLAEDFLKDYIQLNVGSLSLAANHNILQIVDVC-QEVEKDTKLRQL 326
Query: 421 LDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR 480
L+ + + K + + K +++ L+ G+ ++ V ++ R
Sbjct: 327 LNEMVQERAY----KTIIFIETKRKVEDVTRGLRSTGWPEVCIHGDKSQQERDWVLSEFR 382
Query: 481 KRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
A ++ D + ++++ + VI D+ ++YV + R +G ++FFT D
Sbjct: 383 SGRAPILVATDVAARGLDVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTAD 442
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
+ A +I++L++ QVV L ++ S
Sbjct: 443 NCKQAKDLIDVLKEANQVVNPRLYEIMDMS 472
>gi|440801541|gb|ELR22559.1| ATPdependent RNA helicase dbp2, putative [Acanthamoeba castellanii
str. Neff]
Length = 706
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 150/370 (40%), Gaps = 34/370 (9%)
Query: 211 WKCYSSAKDI--LETSGSSSTIV-QIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W C S +D+ L +GS T+ + IV A + GP +L L ++E
Sbjct: 232 WPCALSGRDMVGLAETGSGKTLAFTLPAIVHINAQPFLQPGD------GPIVLILAPTRE 285
Query: 268 KAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL 323
A +++ V FG I ++ G QI L S E +++TP RL+ ++
Sbjct: 286 LAVQIQEVAN---TFGLTSKIKNTCVYGGVPKGPQIRDL-SRGVEIVIATPGRLIDMLET 341
Query: 324 KAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYTSVPAVQNLL 380
++ V+ LV+D D + IR + I T++++ L
Sbjct: 342 GKTNLRRVTYLVLDEADRMLDMGFEPQIRKIMEQIRPDRQTLMWSATWPKEVKALASEFL 401
Query: 381 LGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQ-VLDHAYGDHFHSEPLKVL 437
+ ++++ + + + Q V++ E+ K++K ++ ++D ++L
Sbjct: 402 SQDMIQINIGSMELAANHRVTQIVDIVQEYEKRPKLMKLLETIMDGG----------RIL 451
Query: 438 YIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA- 496
L L+ +G+ +++ A+ R + M+ D +
Sbjct: 452 IFTQTKKGADQLQRALRGEGWPALAIHGDKTQQERDATLAEFRSGRSPIMVATDVAARGL 511
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++++ VI DF + ++YV + R +G +SFFT D A ++I++L + GQ
Sbjct: 512 DVKDVRYVINYDFASTAEDYVHRIGRTGRAGATGTAYSFFTSGDFKLAKRLIKVLSEAGQ 571
Query: 557 VVPDALRDLC 566
VP L
Sbjct: 572 EVPPQLHQFA 581
>gi|268532748|ref|XP_002631502.1| Hypothetical protein CBG20666 [Caenorhabditis briggsae]
Length = 502
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 170/392 (43%), Gaps = 31/392 (7%)
Query: 185 AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAAD 242
+I N ++ +G E+ +P+ W I S +D + S GS T+ +
Sbjct: 94 SIMNEIQKNGFEKPSPIQSQMWPILL-----SGQDCIGVSQTGSGKTLAFLLPAFLHIDA 148
Query: 243 SIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGL 302
+A+ +K P +L L ++E A ++ K G +V L+ G + Q+
Sbjct: 149 QLAQYDKNEKK-PSPSVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRSEQV--- 204
Query: 303 RSCEP--EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP 359
+SC+ E +++TP RL L + I ++ V+ +V+D D L G ++ R +P
Sbjct: 205 QSCKGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEAAIRRILFEIRP 264
Query: 360 HTVVFNDCLTYTSVP-AVQNLLLGSINR--LSLNQSVASQS-ACIIQSVNVCASDE--EK 413
+V LT + P AV+NL + +++N ++ S + Q + ++
Sbjct: 265 DRLV---ALTSATWPEAVRNLTDRYTKQAIMAVNGTLDLASCKSVTQYFEFIPQENRFDR 321
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN 473
+ + + L+ +G+ + K++ V +L S KG + S G + S
Sbjct: 322 VCEIVNFLNQQFGNSY-----KMIIFVKSKVMADHLSSDFCMKGIN-SQGLHGGRSQSDR 375
Query: 474 SVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGI 531
+ K V ++ +++ ++ ++ V+ DF + ++ YV + R G
Sbjct: 376 ELSLKMLKTGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGE 435
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
SF +D ++ +I ILE+ GQ VPD LR
Sbjct: 436 SMSFMWWNDRSNFDGLISILEKSGQEVPDKLR 467
>gi|335287568|ref|XP_003126098.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Sus
scrofa]
Length = 652
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|198282005|ref|NP_001095463.1| probable ATP-dependent RNA helicase DDX17 [Bos taurus]
gi|154757449|gb|AAI51649.1| DDX17 protein [Bos taurus]
gi|296487004|tpg|DAA29117.1| TPA: DEAD box polypeptide 17 [Bos taurus]
Length = 650
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|410965551|ref|XP_004001562.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17 [Felis catus]
Length = 650
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|163915660|gb|AAI57684.1| LOC100135374 protein [Xenopus (Silurana) tropicalis]
Length = 898
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 16/317 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E ++ S CK KA+ + +V+++ G ++ Q L+ E +V TP
Sbjct: 279 GPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGA-EIVVCTP 337
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTY 370
RL+ V KA ++ V+ LV D D + +R SI+ +P T++F+
Sbjct: 338 GRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVR-SIANHVRPDRQTLLFSATFRK 396
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
+++L+ I + + A++ I Q V + S EK + L F
Sbjct: 397 KIEKLARDILVDPIRVVQGDIGEANED--ITQVVEILPSGPEKWTWLTRRL-----VEFT 449
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
S VL V K + + L + L+ + + + +N V +D +K+ ++
Sbjct: 450 ST-GSVLIFVTKKANAEELANNLRQDDHPLGLLHGDMDQSERNKVISDFKKKSIPVLVAT 508
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D + ++ + VI D + + + R G+ H+ T D+ AG ++
Sbjct: 509 DVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAHTLLTPKDSNFAGDLVR 568
Query: 550 ILEQCGQVVPDALRDLC 566
LE Q V L DL
Sbjct: 569 NLEGANQYVSKELLDLA 585
>gi|389631667|ref|XP_003713486.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
gi|152032666|sp|A4RN46.1|PRP5_MAGO7 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|351645819|gb|EHA53679.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
Length = 1012
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 147/326 (45%), Gaps = 31/326 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ CKP LK G+ V + G I QI L+ E +V+T
Sbjct: 451 GPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGA-EIVVATT 509
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + + + + +V+D D + G +++ + +P TV+F+
Sbjct: 510 GRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIFANVRPDRQTVLFS--- 566
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
++P + + L+ + + + V +S A I + ++ K + +++L Y
Sbjct: 567 --ATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVEIRDEKSKFNRLLELLGELYK 624
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGRKRPAV 485
D + ++ L V + K L+ L KGY C+ H K+ V+ D
Sbjct: 625 DD---DDVRSLIFVERQEKADELLRELLRKGY------GCMSLHGGKDQVDRDSTISDFK 675
Query: 486 SMIDKDHISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
S + I+T+ ++++ ++V+ D +++YV R +G +F T++
Sbjct: 676 SGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEE 735
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VP+ L ++
Sbjct: 736 QENCAIGIAKALEQSGQPVPEKLIEM 761
>gi|345777025|ref|XP_860668.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 11
[Canis lupus familiaris]
gi|431905181|gb|ELK10228.1| Putative ATP-dependent RNA helicase DDX17 [Pteropus alecto]
Length = 652
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|152013480|sp|A5E1W4.2|DBP3_LODEL RecName: Full=ATP-dependent RNA helicase DBP3
Length = 535
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 287 VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG 345
V+++ G + D QI +R+ +V+TP RL+ L++ A+D+S ++ LV+D D L KG
Sbjct: 227 VAIYGGVSKDDQIKKIRNGA-NVVVATPGRLVDLINDGAVDLSSINYLVLDEADRMLEKG 285
Query: 346 ---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQ 402
D +I + + T++F N + + ++ S + I Q
Sbjct: 286 FEEDIKLIIGSTPAQGRQTLMFTATWPKEVRELANNFMNQPVKVTIGDRDELSANKRITQ 345
Query: 403 SVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD-SKFQNLVSTLKCKGYSIS 461
V V +K K I +L + V + K+ S+ ++L+ K K +I
Sbjct: 346 IVEVLDDKFQKEKKLINLLQKYQNTGNGDNKILVFALYKKEASRIESLLHRNKFKVAAI- 404
Query: 462 TGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEI 519
+ +S + + K +++ ++ L+ + VI F +++++YV
Sbjct: 405 ---HGDLSQQQRTQALQSFKSGECNLLLATDVAARGLDIPNVKYVINLTFPLTIEDYVHR 461
Query: 520 LTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
L R +GI H+FFT+D+ +G + IL Q VP+AL
Sbjct: 462 LGRTGRAGQTGIAHTFFTEDEKHLSGALCNILRGANQPVPEAL 504
>gi|348532716|ref|XP_003453852.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Oreochromis niloticus]
Length = 653
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 168 GPICLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 226
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR + I T++++
Sbjct: 227 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKE 286
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 287 VRQLAEDFLRDYI-QINIGALELSANHNILQIVDVCM-ETEKDNKLIQLMEEIMAEKEN- 343
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + +L ++ G+ ++ V + R A +I D
Sbjct: 344 ---KTIIFVETKKRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATD 400
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++ +
Sbjct: 401 VASRGLDVEDVKFVINYDYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRV 460
Query: 551 LEQCGQVV 558
LE+ Q +
Sbjct: 461 LEEARQAI 468
>gi|255072011|ref|XP_002499680.1| predicted protein [Micromonas sp. RCC299]
gi|226514942|gb|ACO60938.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 442
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 153/366 (41%), Gaps = 26/366 (7%)
Query: 209 EFWKCYSSAKDILETS--GSSSTIVQIAWIVATAA-DSIARKEKEGFSFTGPFLLFLVSS 265
E W +D+L + GS T+ + V A D+ K+ P L + +
Sbjct: 27 ECWPPACVGRDVLGIAPPGSGKTLAYLLPAVEFAMRDARDNPRKKRDPPGRPSALVIAPT 86
Query: 266 QEKAAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGLRSCEPE----FLVSTPERLLKL 320
+E ++ SVC LK A + V+++ GA+ Q L +P +V TP RLL +
Sbjct: 87 RELTQQIASVCNKLKRAAPVRCVAVYGGASQSEQEDEL--AQPTSMATLVVGTPGRLLAV 144
Query: 321 VSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPA 375
+ A+ + LLV+ DR+ +L + L IR+++ +P T++F+ V A
Sbjct: 145 MGTGALGLERARLLVLDEADRMLALGFAEQLEQIREALP-RPGRQTLMFSATFP-KGVRA 202
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGDHFHSEP 433
V L + ++ VA+ + Q+V+VCA ++ K+LK I L G
Sbjct: 203 VAKAWLAP--KPAIGDGVAAGDLNVDQTVHVCAEHKKGRKLLKHITELRKNDGRSKS--- 257
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
+VL + + LK G + T + ++ D + + ++ D
Sbjct: 258 -RVLVFANRIKTVNFVGDLLKRHGEKVCTLHGELKQERRDQALKDFKSGKSPVLVATDVA 316
Query: 494 STA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILE 552
++ E V+ D S++ Y + R G SFFT++ A A ++ +L
Sbjct: 317 GRGLDITGLEHVVNWDMPGSVEQYTHRVGRAGRSGRKGAALSFFTRNMAPIAPDLVRLLR 376
Query: 553 QCGQVV 558
+ G V
Sbjct: 377 RGGHFV 382
>gi|294462365|gb|ADE76731.1| unknown [Picea sitchensis]
Length = 236
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++ + EVVI F ++ ++YV + R G+ H+FFT+ D A +G+++ +L + GQ
Sbjct: 131 DIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQADKARSGELVNVLREAGQ 190
Query: 557 VVPDAL 562
VVPD L
Sbjct: 191 VVPDDL 196
>gi|149065925|gb|EDM15798.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_b [Rattus
norvegicus]
Length = 523
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 36 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 94
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 95 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 154
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 155 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 211
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 212 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 264
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 265 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 324
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 325 LIKVLEEANQAINPKLMQL 343
>gi|365902598|ref|ZP_09440421.1| superfamily II DNA/RNA helicase [Lactobacillus malefermentans KCTC
3548]
Length = 438
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G +L L SQE A + SV + K++ + ++L GA + Q+ LR PE ++ TP
Sbjct: 61 GSQILILSPSQELAMQTTSVIRDWAKSYDVKVLALTGGANVKRQMEQLRK-RPEIIIGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
R+L LV + + + + +++D D L G+TL +R ++ P V + T P
Sbjct: 120 GRVLNLVEDRKLKLHLMQTIIIDEADDLLAGETLETVRNTVEQAPADVQLG-FFSATETP 178
Query: 375 AVQNL 379
+ L
Sbjct: 179 ILHEL 183
>gi|351699283|gb|EHB02202.1| Putative ATP-dependent RNA helicase DDX17 [Heterocephalus glaber]
Length = 650
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 454 LIKVLEEANQAINPKLMQL 472
>gi|297807481|ref|XP_002871624.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317461|gb|EFH47883.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 713
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 141/335 (42%), Gaps = 52/335 (15%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K K+ I L+ GA Q+ + + +V+TP
Sbjct: 301 GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGV-DIVVATP 359
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYT 371
RL ++ ++ I + VS LV+D D + IR+ ++ P T+++
Sbjct: 360 GRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKE 419
Query: 372 SVPAVQNLLL--GSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHA 424
+LL+ +N ++++ VA++S I Q++ V A E E+IL+
Sbjct: 420 VRKIAADLLVNPAQVNIGNVDELVANKS--ITQTIEVLAPMEKHSRLEQILR-------- 469
Query: 425 YGDHFHSEPLKVLYIVGK-----DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD- 478
EP + I D +NL T + K+ E D
Sbjct: 470 -----SQEPGSKIIIFCSTKRMCDQLARNLTRTFGA----------AAIHGDKSQAERDD 514
Query: 479 -------GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
GR P + D ++++ VV+ DF +++YV + R +G+
Sbjct: 515 VLNQFRSGRT-PVLVATDV-AARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGL 572
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
++FF DA HA +I+ILE Q VP +R++
Sbjct: 573 AYTFFGDQDAKHASDLIKILEGANQKVPPQVREMA 607
>gi|410055921|ref|XP_003953938.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1 [Pan
troglodytes]
Length = 642
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 157 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 215
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 216 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 275
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 276 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 332
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 333 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 385
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 386 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 445
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 446 LIKVLEEANQAINPKLMQL 464
>gi|452840202|gb|EME42140.1| hypothetical protein DOTSEDRAFT_81118 [Dothistroma septosporum
NZE10]
Length = 590
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 129/288 (44%), Gaps = 13/288 (4%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDR---- 338
G+ V ++ G + D Q L+ C +V+TP RL + ID+S V+ LV+D
Sbjct: 274 GLKAVCVYGGMSKDDQRHQLKGCH--IVVATPGRLNDFIGDGTIDLSNVNYLVLDEADRM 331
Query: 339 LDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQ-- 396
LD+ + D +I+ + GK + SV + + L RL + ++ + +
Sbjct: 332 LDTGFEQDIRKIIQAAADGKDRQTLMFTATWPESVRKLASEFLRDPVRLMIGENASGELR 391
Query: 397 -SACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKC 455
+ I+Q V V + +K + Q+L ++ + V + K++ + ++
Sbjct: 392 ANERIVQEVEVI-EEFDKQNRLFQLLKQYQSGKNRTDRILVFCLYKKEA--TRIEEFIRR 448
Query: 456 KGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMK 514
KG+ ++ + + + A+ + ++ D + ++ +VVI F ++++
Sbjct: 449 KGFPVAGIHGDLSQEKRMASLAEFKSGKVPCLVATDVAARGLDIPAVKVVINVTFPLTVE 508
Query: 515 NYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+YV + R G + FT+++ AG +I +L++ Q VP+ L
Sbjct: 509 DYVHRIGRTGRAGQDGRAITLFTQNEKGLAGALINVLKKANQPVPEEL 556
>gi|385304572|gb|EIF48584.1| atp-dependent rna helicase [Dekkera bruxellensis AWRI1499]
Length = 397
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 29/296 (9%)
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD 340
A G+H V ++ G + Q +R + +++TP RLL L+ ++D+S V L++D D
Sbjct: 95 AVGLHCVCIYGGVPKEEQRREVRRSQ--CVIATPGRLLDLIQEGSVDLSNVDYLILDEAD 152
Query: 341 S-LSKG---DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPAVQNLLLGSINRL 387
L KG D S++ Q+ S + T++F T+ + P + +G + L
Sbjct: 153 RMLEKGFEEDIKSIVGQTRSDR-QTLMFTATWPKEVRELASTFMNKPV--KISIGDTDEL 209
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
+ N+ + Q V V E++ + + G H ++L +
Sbjct: 210 TANKRIK-------QIVEVIEPMEKRGKLLELLEXYLSGSKKHD---RILIFALYKKEAA 259
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIV 506
+ L+ GY ++ + + + + M+ D + ++ +VVI
Sbjct: 260 RVERDLRYHGYDVAALHGDLSQAQRTEALENFKSGRCNLMLATDVAARGLDIPNVKVVIN 319
Query: 507 PDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
F ++ ++YV + R SGI H+ FTK++ AG ++ +L Q VP+ L
Sbjct: 320 LTFPLTAEDYVHRIGRTGRAGHSGIAHTLFTKEEKHLAGALMNVLRAADQPVPEDL 375
>gi|448535145|ref|XP_003870913.1| Dbp3 ATP-dependent DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
gi|380355269|emb|CCG24786.1| Dbp3 ATP-dependent DEAD-box RNA helicase [Candida orthopsilosis]
Length = 543
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 9/285 (3%)
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-L 342
I V+++ G + D Q+ +RS +V+TP RL+ L++ AID+S ++ LV+D D L
Sbjct: 228 ISCVAIYGGVSKDDQVKKIRSG-ANVVVATPGRLVDLINDGAIDLSSINYLVLDEADRML 286
Query: 343 SKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSAC 399
KG D +I + + T++F N + I ++ S +
Sbjct: 287 EKGFEEDIKHIIGSTNAENRQTLMFTATWPKEVRELANNFMKSPIKLTIGDRDELSANKR 346
Query: 400 IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYS 459
I Q V V +K K I +L+ Y + + + K+L + + S L+ +
Sbjct: 347 ITQIVEVLDDKFQKESKLISLLNK-YQHNGNGQDNKILVFALYKKEASRIESLLRRNRFK 405
Query: 460 ISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYV 517
++ + +S + + + K S++ ++ L+ + VI F +++++YV
Sbjct: 406 VA-AIHGDLSQQQRTQALNSFKSGECSLLLATDVAARGLDIPNVKYVINLTFPLTIEDYV 464
Query: 518 EILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+ R +G+ H+ FT+D+ +G + IL Q VP+ L
Sbjct: 465 HRIGRTGRAGQTGVAHTLFTEDEKHLSGALCNILRGANQPVPEQL 509
>gi|343959846|dbj|BAK63780.1| probable ATP-dependent RNA helicase DDX17 [Pan troglodytes]
Length = 642
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 157 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 215
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 216 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 275
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 276 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 332
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 333 --KTIIFVEAKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 385
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 386 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 445
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 446 LIKVLEEANQAINPKLMQL 464
>gi|226290234|gb|EEH45718.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Paracoccidioides brasiliensis Pb18]
Length = 1079
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 32/320 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LKA + V + GA I QI L+ E +V TP
Sbjct: 540 GPIGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGA-EIIVCTP 598
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ L++ A V+ V+ +V+D D + + I ++ + TV+F+
Sbjct: 599 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNVRPQRQTVLFSATF 658
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + + +SV + I Q V V D K ++ + +L Y D
Sbjct: 659 PRNMEALARKTLTKPVEIVVGGRSVVAPE--ITQIVEVRNEDT-KFVRLLALLGDLYADD 715
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
++E + L V + Q + Y+ + I SV A G
Sbjct: 716 -NNEDARTLIFVDR----QEAAEWSAPRPYAQGLPAGVFPILIATSVAARG--------- 761
Query: 489 DKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
++++ ++VI D +++YV R +G +F T+ ++ +
Sbjct: 762 -------LDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEVQERYSVDIS 814
Query: 549 EILEQCGQVVPDALRDLCHT 568
+ L+Q GQ VP+A++ + ++
Sbjct: 815 KALKQSGQPVPEAVQKMVNS 834
>gi|168015786|ref|XP_001760431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688445|gb|EDQ74822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 675
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 136/323 (42%), Gaps = 28/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGAAIDHQITGLRSCE--PEFLVS 312
GP +L + ++E A +++ C K ++ I + ++ GA Q LR E + +++
Sbjct: 227 GPSVLVIAPTRELATQIQEECVKFGRSSRITSTCVYGGAPKGPQ---LRDIERGADIVIA 283
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLT 369
TP RL + +K I + VS LV+D D + IR+ I + T+++
Sbjct: 284 TPGRLNDFLEVKKISLRQVSYLVLDEADRMLDMGFEPQIRKIVNEILSRRQTLMYTATWP 343
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHA 424
+LL+ + N S + I Q V V E E+IL+
Sbjct: 344 KEVRKIAGDLLINPVQVNIGNTDELSANKSITQHVEVVVPYEKQRRLEQILR-------- 395
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
EP + + + +++S + + + ++ V + R
Sbjct: 396 -----SQEPGSKIIVFCSTKRMCDMLSRNLGRDFGAAAIHGDKSQSERDFVLSQFRTGRT 450
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++++ V+ DF +++YV + R +G+ ++FF++ D +
Sbjct: 451 PILVATDVAARGLDIKDIRFVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFSEQDGKY 510
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
A ++I++LE Q VP L+D+
Sbjct: 511 AKELIKVLEGANQKVPQELKDIA 533
>gi|338721130|ref|XP_001916530.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Equus
caballus]
Length = 793
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 306 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 364
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 365 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 424
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 425 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 481
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 482 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 534
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 535 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 594
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 595 LIKVLEEANQAINPKLMQL 613
>gi|297845068|ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
gi|297336257|gb|EFH66674.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
Length = 827
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 36/328 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S + K K GI V ++ G+ + QI+ L+ E +V TP
Sbjct: 264 GPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGT-EIVVCTP 322
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ S K ++ V+ LV+D R+ + ++ I Q+I + TV+F+
Sbjct: 323 GRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATF 382
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L + +SV ++ I Q V V + ++ + +++L Y
Sbjct: 383 PRQVETLARKVLNKPVEIQVGGRSVVNKD--ITQLVEV-RPESDRFFRLLELLGEWY--- 436
Query: 429 FHSEPLKVLYIVGK----DSKFQNLVST----LKCKGYSISTGSNCIVSHIKNSVEADGR 480
E K+L V D+ +++++ + L G T +S K++V
Sbjct: 437 ---EKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKSNV----- 488
Query: 481 KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+++ ++ L+ E E+V+ D ++YV + R G +F ++
Sbjct: 489 ----CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 544
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
DDA +A +++ LE Q VPD L+ L
Sbjct: 545 DDAKYAPDLVKALELSEQPVPDDLKALA 572
>gi|449481826|ref|XP_002195734.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Taeniopygia
guttata]
Length = 655
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 163 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 221
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 222 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 281
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 282 VRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 338
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 339 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 391
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 451
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 452 LIKVLEEANQAINPKLMQL 470
>gi|198432373|ref|XP_002121386.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
[Ciona intestinalis]
Length = 727
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 159/396 (40%), Gaps = 42/396 (10%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADS 243
I +A+R Q P + + GI C S +D++ +GS T I ++ D
Sbjct: 254 IISAIRKHNFTQPTP--IQAQGI---PCGMSGRDVIGIAKTGSGKTAAFIWPMLVHIMDQ 308
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL 302
K+ +G P L + ++E ++ CK K +G+ +V + G + Q GL
Sbjct: 309 PELKKGDG-----PVGLIVAPTRELCQQIYFECKRFGKVYGLRSVCCYGGGNMHEQQKGL 363
Query: 303 R-SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHT 361
CE +V+TP R++ V K ++ V+ LV D D + + + Q S H
Sbjct: 364 SDGCE--IVVATPGRIIDHVKKKNTNLLRVTYLVFDEADRMFE---MGFEYQVRSIANHV 418
Query: 362 VVFNDCLTYTSVPAVQNLLLGSINRLS---LNQSVASQSACIIQS-VNVCASDEEKILKG 417
P Q LL + R L + + + IIQ V +D +I++
Sbjct: 419 R-----------PDRQTLLFSATFRKRIERLARDILTDPVRIIQGDVGEANADVTQIVEV 467
Query: 418 IQVLDHAYGD------HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI 471
+ D + F SE +L V K + + L + L +G+ ++ + +
Sbjct: 468 FKTADMKWKWLLRRIIPFTSEG-SLLVFVTKKANAEELATNLINEGHDVALIHGDMQQYD 526
Query: 472 KNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530
+N+V + +K+ +++ D + ++ VI D + + + R G
Sbjct: 527 RNNVITNFKKKQVATLVATDVAARGLDIPLIRNVINYDVARDIDTHTHRIGRTGRAGQKG 586
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
++ T D +G ++ LE GQ VPD L L
Sbjct: 587 TAYTLVTSKDTYFSGDLVRNLEGAGQRVPDDLLQLA 622
>gi|291389880|ref|XP_002711450.1| PREDICTED: DEAD box polypeptide 17 [Oryctolagus cuniculus]
Length = 835
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 20/312 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 348 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 406
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 407 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 466
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 467 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 523
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 524 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 576
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 577 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 636
Query: 547 MIEILEQCGQVV 558
+I++LE+ Q +
Sbjct: 637 LIKVLEEANQAI 648
>gi|118082784|ref|XP_416260.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Gallus
gallus]
Length = 655
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 163 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 221
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 222 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 281
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 282 VRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 338
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 339 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 391
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 451
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 452 LIKVLEEANQAINPKLMQL 470
>gi|326911972|ref|XP_003202329.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Meleagris gallopavo]
Length = 645
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 153 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 211
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 212 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 271
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 272 VRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 328
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 329 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 381
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 382 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 441
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 442 LIKVLEEANQAINPKLMQL 460
>gi|189520693|ref|XP_001923830.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Danio rerio]
Length = 671
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 10/317 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 168 GPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 226
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ + +P T+
Sbjct: 227 GRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 286
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +E K K IQ+++ + +
Sbjct: 287 VRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENE-KDNKLIQLMEEIMAEKEN-- 343
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + L ++ G+ ++ V + R A +I D
Sbjct: 344 --KTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDV 401
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++ +L
Sbjct: 402 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVL 461
Query: 552 EQCGQVVPDALRDLCHT 568
E+ Q + L L T
Sbjct: 462 EEARQAINPKLLQLVDT 478
>gi|50550293|ref|XP_502619.1| YALI0D09449p [Yarrowia lipolytica]
gi|74659944|sp|Q6C9P3.1|DBP3_YARLI RecName: Full=ATP-dependent RNA helicase DBP3
gi|49648487|emb|CAG80807.1| YALI0D09449p [Yarrowia lipolytica CLIB122]
Length = 532
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 141/321 (43%), Gaps = 30/321 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G +L + ++E A ++ K L G+H V ++ G + Q + L+ F+++TP
Sbjct: 194 GVRVLVVSPTRELAMQIYDNIKELCDVVGLHAVCVYGGVPKEQQRSDLKRAS--FVIATP 251
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCLTY 370
RL L+ + D+S VS LV+D D L KG D +I + TV+F +
Sbjct: 252 GRLCDLIDEGSCDLSKVSYLVLDEADRMLEKGFEEDIKKIIGSTRPTGRQTVMF----SA 307
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD--- 427
T P V+ L G + + + +I + A++ ++I + ++VLD +
Sbjct: 308 TWPPEVRKLAEGFMK---------TPTKVMIGERDELAAN-KRITQSVEVLDPRAKEGRL 357
Query: 428 -----HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
+ ++ K+L + + +TL +GY ++ + + + +K
Sbjct: 358 LDLLRQYANDDFKILIFALYKKEATRVENTLTRRGYGVAAIHGDLSQQQRTKALDEFKKG 417
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
++ D + ++ ++VI F +++++YV + R +G + FT+ +
Sbjct: 418 EKNILLATDVAARGLDIPNVKLVINLTFPLTVEDYVHRIGRTGRAGKTGQAITLFTEHEK 477
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
+G +I +L Q VPD L
Sbjct: 478 HLSGALINVLRGADQPVPDEL 498
>gi|327284970|ref|XP_003227208.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Anolis
carolinensis]
Length = 647
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 159 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 217
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 218 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 277
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 278 VRQLAEDFLHDYVQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 334
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 335 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 387
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 388 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 447
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 448 LIKVLEEANQAINPKLMQL 466
>gi|119580652|gb|EAW60248.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_h [Homo
sapiens]
Length = 547
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 62 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 121 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 180
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 181 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 237
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 238 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 290
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 291 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 350
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 351 LIKVLEEANQAINPKLMQL 369
>gi|281206327|gb|EFA80516.1| exocyst complex subunit 3 [Polysphondylium pallidum PN500]
Length = 1349
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 154 HLNGKSCAN--GHHGQACEKLDCPSKFLILCLN------AIENAMRHDGVEQDNPLFVNS 205
+ + C+N H + D P+ +L +I N ++ V + P + S
Sbjct: 885 QMTPEECSNFLNEHNVTVKSKDSPAPNPVLAFEDMQFAPSITNILK---VNYEKPTPIQS 941
Query: 206 WGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLV 263
G W S +D++ S GS TI A I + ++ + GP +L +
Sbjct: 942 IG---WPVALSGRDMIGISQTGSGKTIS----FFLPAIQHILSQPRQTGPYLGPQVLIIA 994
Query: 264 SSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVS 322
++E + ++ +P LKA +++V + G + HQI L+ C P+ ++ TP R++ ++
Sbjct: 995 PTRELSVQISHEAQPYLKAARLNSVVMFGGESKSHQIRDLKRC-PQVVIGTPGRIIDIMK 1053
Query: 323 LKAIDVSGVSLLVVDRLDSL 342
+++ VS V+D D +
Sbjct: 1054 EGYLNLKRVSFFVLDEADRM 1073
>gi|327275873|ref|XP_003222696.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Anolis
carolinensis]
Length = 924
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E ++ + CK KA+ + +V+++ G ++ Q L+ E +V TP
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGA-EIVVCTP 384
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ V KA ++ V+ LV D D + +R S +P T++F+
Sbjct: 385 GRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSVASHVRPERQTLLFSATFRKK 444
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK--ILKGIQVLDHAYGDHF 429
+++L+ I + + A++ I Q V + AS K L V + G
Sbjct: 445 IEKLARDILIDPIRVVQGDIGEANED--ITQIVEIFASGPNKWNWLTSRLVEFTSSG--- 499
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
VL V K + + L + LK +G+S+ + +N V +D +K ++
Sbjct: 500 -----SVLLFVTKKANAEELANNLKQEGHSLGLLHGDMDQSERNKVISDFKKGAFPVLVA 554
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + ++ + VI D + + + R G+ ++ T D+ AG ++
Sbjct: 555 TDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTHKDSNFAGDLV 614
Query: 549 EILEQCGQVVPDALRDLC 566
LE Q V L DL
Sbjct: 615 RNLEGANQNVSKELLDLA 632
>gi|19113180|ref|NP_596388.1| ATP-dependent RNA helicase Dbp3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1723271|sp|Q10202.1|DBP3_SCHPO RecName: Full=ATP-dependent RNA helicase dbp3
gi|3451298|emb|CAA20430.1| ATP-dependent RNA helicase Dbp3 (predicted) [Schizosaccharomyces
pombe]
Length = 578
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 31/271 (11%)
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-------HTV 362
++ TP RLL L++ +ID S V LV+D D + IR IS P
Sbjct: 289 IIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQT 348
Query: 363 VFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLD 422
VF SV A+ L ++++ + S I Q V + K ++LD
Sbjct: 349 VFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKE----RMLD 404
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLV----STLKCKGYSISTGSNCIVSHIKNSVEA- 477
+ H S GKD K V + +G +++ N + H S A
Sbjct: 405 NLLRKHLSSG--------GKDDKILIFVLYKKEAARVEG-TLARKYNVVGIHGDMSQGAR 455
Query: 478 -----DGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
D + ++ D + ++ + ++VI F +++++YV + R G
Sbjct: 456 LQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGT 515
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+FFT D +HAG+++ +L Q Q +P+ L
Sbjct: 516 AITFFTPQDKSHAGELVNVLRQAKQDIPEGL 546
>gi|170053024|ref|XP_001862487.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167873709|gb|EDS37092.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 935
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 157/371 (42%), Gaps = 25/371 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ + + A + +G P +L L ++E
Sbjct: 284 WPIALSGRDMVGIAQTGSGKTLAYMLPAIVHIAHQKPLQRGDG-----PIVLVLAPTREL 338
Query: 269 AAKVRSVCKPLKAFGIHT------VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVS 322
A ++++V ++ FG H+ + GA Q+ L E +++TP RL+ +
Sbjct: 339 AQQIQTV---VRDFGTHSKPNIRYTCIFGGALKGPQVRDLERGV-EVVIATPGRLIDFLE 394
Query: 323 LKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLL 380
++ + LV+D D + IR+ I +P V T+ V A+
Sbjct: 395 RGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDF 454
Query: 381 LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIV 440
L ++++ S + I Q V++C + EK K + +L D + K++ V
Sbjct: 455 LHDYIQINVGSLNLSANHNIHQIVDIC-EENEKEGKLLSLLKEIASDVNN----KIIIFV 509
Query: 441 GKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELE 499
K ++L+ + GY ++ ++ V D R + ++ D + ++E
Sbjct: 510 ETKKKVEDLLKNIVRDGYGATSIHGDKSQSERDYVLQDFRHGKSTILVATDVAARGLDVE 569
Query: 500 EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
+ + VI D+ S ++Y+ + R + G ++FFT + A +++ +LE+ GQ
Sbjct: 570 DVKYVINFDYPNSSEDYIHRIGRTGRCSSFGTAYTFFTPGNGRQARELLSVLEEAGQQPT 629
Query: 560 DALRDLCHTSP 570
L + + P
Sbjct: 630 PELISMAKSMP 640
>gi|312371167|gb|EFR19420.1| hypothetical protein AND_22552 [Anopheles darlingi]
Length = 1161
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/478 (20%), Positives = 190/478 (39%), Gaps = 50/478 (10%)
Query: 118 EQTKEKAINLKNSQDKSLLFID--GVE----KRTGNVERAEVHLNGKSCANGH----HGQ 167
E K+ A NL N Q K L ID G+ ++ VE E+ ++ + + G
Sbjct: 417 EDIKDTAANLANKQKKELAKIDHSGINYLPFRKLFYVEVPEIARMTQTEVDAYKKELEGI 476
Query: 168 ACEKLDCPSKFLILCLNAIE----NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
A + CP + +R G E+ P+ + S +D++
Sbjct: 477 AVKGKGCPKPIKTWAHCGVSRKEFEVLRKLGFEKPTPIQCQAI-----PAIMSGRDLIGI 531
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKV-RSVCKPLK 280
+GS T+ I + D ++ +G P + + ++E ++ + + K K
Sbjct: 532 AKTGSGKTLAFILPMFRHILDQPPLEDGDG-----PIAIIMTPTRELCMQIGKDIKKFSK 586
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
+ + TV ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 587 SLNLRTVCVYGGTGISEQIAELKRGA-EIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLD 645
Query: 338 RLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R +I TV+F+ + P L I + + V
Sbjct: 646 EADRMFDMGFEPQVMRIIDNIRPDRQTVMFS-----ATFPRQMEALARRILKKPIEVQVG 700
Query: 395 SQSACI--IQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
+S ++ V DE K K +++L + E ++ V K L+
Sbjct: 701 GRSVVCKEVEQHVVVLEDEAKFFKLLELLG------LYQEQGSIIVFVDKQENADILLKD 754
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y+ + I ++S D K+ V ++ ++ L+ ++++V ++
Sbjct: 755 LMKASYACMSLHGGIDQFDRDSTMNDF-KQGRVKLLIATSVAARGLDVKQLILVVNYDCP 813
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
++YV R G +F T + +AG +I LE G VP+ LR L T
Sbjct: 814 NHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYAGDIIRALELSGGTVPEDLRQLWDT 871
>gi|412985561|emb|CCO19007.1| predicted protein [Bathycoccus prasinos]
Length = 585
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 162/414 (39%), Gaps = 51/414 (12%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTI-VQIAWIVATAAD 242
I A++ G E+ P+ SW I + +DI + +GS T + + +
Sbjct: 154 IVAALKKQGYEKPTPIQAFSWTIAL-----TGRDIVAIAKTGSGKTCSFLLPALTRIKKN 208
Query: 243 SIARKEKEGFSFTG--------PFLLFLVSSQEKAAKVRSVC-KPLKAFGIHTVSLHPGA 293
+K E G P + L ++E A ++ C K A V L+ GA
Sbjct: 209 GGPQKAPEMKLVNGRWKPGAVKPTSIVLAPTRELAIQINDECAKFCPAVKAKCVVLYGGA 268
Query: 294 AIDHQITGLRSCEPEFLVSTPERLLKLVSLKA-----IDVSGVSLLVVDRLDSLSKGDTL 348
A Q+ LR + +V+TP R+ + + S + +V+D D +
Sbjct: 269 AKGDQLRALRGGA-DIVVATPGRINDFLDPPPGFSAPVSASAATYVVLDEADRMLDMGFE 327
Query: 349 SLIRQSISGKPH---TVVFNDCL---------TYTSVPAVQNLLLGSINRLSLNQSVASQ 396
I++ I PH T+ ++ +T+ P ++ G +L+ N+
Sbjct: 328 PQIKKIIKLCPHARQTLFYSATWPKAVQKIAANFTTKPIQVSIGEGGTGKLTANK----- 382
Query: 397 SACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK 456
I Q V VC DE K +Q + E + G + L L+
Sbjct: 383 --MITQIVQVCTEDE-KFDNCMQAMGEL------EEKDTCIVFCGTKRRCDFLDRKLRQS 433
Query: 457 G-YSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMK 514
G +S H + + RK ++ D + ++ +V++ DF +++
Sbjct: 434 GIHSCGAIHGDKDQHEREKSLDNFRKGRGNVLVATDVAARGLDIPGVAMVLIYDFPGAVE 493
Query: 515 NYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+YV + R +GI H+ FT++D+ A ++++I+E Q +P L+ L T
Sbjct: 494 DYVHRIGRTGRAGKTGIAHTLFTREDSQQARELVQIMEGADQAIPPELQALVRT 547
>gi|326519741|dbj|BAK00243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 649
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 138/318 (43%), Gaps = 18/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K ++ I + L+ GA Q+ L + +V+TP
Sbjct: 233 GPTVLVLSPTRELATQIQDEAIKFGRSSRISSTCLYGGAPKGPQLRDLERGA-DIVVATP 291
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL ++ + + + V+ LV+D D + IR+ + K T++F
Sbjct: 292 GRLNDILEMGKVSLRQVAYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPRE 351
Query: 372 SVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
+LL + N + ++ VA++S I Q V V S EK + Q+L
Sbjct: 352 VRKIASDLLTNPVQVNIGNTDELVANKS--ITQYVEVTTS-MEKGRRLDQILRQ------ 402
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
EP + I + + +S + Y S ++SV ++ R ++
Sbjct: 403 -QEPGSKVIIFCSTKRMCDQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVA 461
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + ++++ VV+ DF +++YV + R SGI ++FF D+ +A ++
Sbjct: 462 TDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLV 521
Query: 549 EILEQCGQVVPDALRDLC 566
+ILE Q V LR +
Sbjct: 522 KILEGANQAVSPELRAMV 539
>gi|52545677|emb|CAH10627.2| hypothetical protein [Homo sapiens]
Length = 652
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 22/321 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 165 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 224 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 284 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 340
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 341 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 393
Query: 488 IDKDHISTA---ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A
Sbjct: 394 IATDVASRGLGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQA 453
Query: 545 GQMIEILEQCGQVVPDALRDL 565
++I++LE+ Q + L L
Sbjct: 454 RELIKVLEEANQAINPKLMQL 474
>gi|395833421|ref|XP_003789733.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Otolemur
garnettii]
Length = 647
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 138/315 (43%), Gaps = 17/315 (5%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
P +L L ++E A +V + C G+ +V ++ G D QI LR + +++TP R
Sbjct: 316 PGMLVLTPTRELAIQVEAECSKYSYKGLRSVCVYGGGDRDRQIEDLRKGV-DVIIATPGR 374
Query: 317 LLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
L L +++ V+ LV+D D L G +++ + +P +T + P
Sbjct: 375 LNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDR---QTIMTSATWPY 431
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQV-LDHAYGDHFHSE 432
L S + + V + + +V NV + EE+ IQ L+H S
Sbjct: 432 AVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNVIVTTEEEKRAHIQTFLEHL------SP 485
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
KV+ V + + +L S L + S+ + + D + +I D
Sbjct: 486 NDKVIVFVCRKAVADHLSSDLILRHISVESLHGNREQRDREKALEDFKTGKVRILIATD- 544
Query: 493 ISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+++ L+ +++ V DF +++ YV + R +G+ + T++D A ++I+I
Sbjct: 545 LASRGLDVHDITHVYNYDFPRNIEEYVHRIGRTGRAGRTGVAITLVTRNDWRVATELIDI 604
Query: 551 LEQCGQVVPDALRDL 565
LE+ Q +P+ L+ +
Sbjct: 605 LERANQSIPEELKAM 619
>gi|345308872|ref|XP_003428757.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17-like [Ornithorhynchus anatinus]
Length = 842
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 357 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 415
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 416 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 475
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 476 VRQLAEDFLREYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 532
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 533 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 585
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 586 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 645
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 646 LIKVLEEANQAINPKLMQL 664
>gi|312875677|ref|ZP_07735678.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 2053A-b]
gi|325912693|ref|ZP_08175076.1| DEAD/DEAH box helicase [Lactobacillus iners UPII 60-B]
gi|329920162|ref|ZP_08276993.1| DEAD/DEAH box helicase [Lactobacillus iners SPIN 1401G]
gi|311088931|gb|EFQ47374.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 2053A-b]
gi|325478114|gb|EGC81243.1| DEAD/DEAH box helicase [Lactobacillus iners UPII 60-B]
gi|328936616|gb|EGG33060.1| DEAD/DEAH box helicase [Lactobacillus iners SPIN 1401G]
Length = 405
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 173
>gi|432848351|ref|XP_004066302.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Oryzias
latipes]
Length = 648
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 132/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K+ I + ++ GA QI L E ++TP
Sbjct: 169 GPICLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGV-EICIATP 227
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 228 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 287
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I ++++ S + I+Q V+VC +E K K +Q+++ + +
Sbjct: 288 VRQLAEDFLREYI-QINIGALELSANHNILQIVDVCMENE-KDNKLLQLMEEIMAEKEN- 344
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + +L ++ G+ ++ V + R A +I D
Sbjct: 345 ---KTIIFVETKKRCDDLTRKMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATD 401
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++ +
Sbjct: 402 VASRGVDVEDVKFVINYDYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRV 461
Query: 551 LEQCGQVV 558
LE+ Q +
Sbjct: 462 LEEARQAI 469
>gi|380016586|ref|XP_003692261.1| PREDICTED: ATP-dependent RNA helicase p62-like [Apis florea]
Length = 529
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 31/325 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSV-CKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
GP L L ++E A +++ V C +FG + + + GA Q L E ++T
Sbjct: 188 GPIALILAPTRELAQQIQKVTC----SFGYVRSTCIFGGAPKGSQARDLEQGV-EICIAT 242
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS 372
P RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 243 PGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPK 302
Query: 373 VPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDHAYGD 427
V+NL L +L++ S + I+Q V+VC DE+ K+ +Q + + D
Sbjct: 303 --EVRNLAEEYLVDYTQLNIGSLTLSANHNILQIVDVCEEDEKQTKLQNLLQEISNVSPD 360
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD------GRK 481
K + V K +++ T++ G+ + CI K+ +E D R
Sbjct: 361 GG-----KTIIFVETKKKVESITKTIRRYGWP----AVCIHGD-KSQLERDFVLSEFRRN 410
Query: 482 RPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ ++ + ++++ + VI D+ S ++Y+ + R SG ++FFT +
Sbjct: 411 KDSILVATDVAARGLDVDDVKYVINFDYPNSSEDYIHRIGRTGRSNNSGTSYAFFTPQNG 470
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
A ++ +L++ Q+V L +L
Sbjct: 471 RQAKSLVNVLKEAKQIVNPKLMELA 495
>gi|224048550|ref|XP_002190979.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Taeniopygia
guttata]
Length = 729
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 137/318 (43%), Gaps = 27/318 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C GI ++ ++ G QI + + + +++TP
Sbjct: 399 GPGMLVLAPTRELALQVEAECSKYAYKGIKSICVYGGGDRKGQID-MVTKGVDIVIATPG 457
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPH------TVVFNDCL 368
RL L I++ ++ LV+D D L G +++ I +P + + D +
Sbjct: 458 RLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMTSATWPDGV 517
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ ++N ++ + L L + +Q + +E+K + H++
Sbjct: 518 RRLAKSYLKNPMIVYVGTLDL------AAVSTVQQKVIVIPEEKK-----RAFMHSFIKS 566
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIVSHIKNSVEADGRKRPAVS 486
+ KV+ VGK +L S +G + + G+ D K+ V
Sbjct: 567 MKPKD-KVIIFVGKKLTADDLASDFGIQGIPVQSLHGNR---EQCDREQALDDFKKGKVR 622
Query: 487 MIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ +++ L+ +++ V DF +++ YV + R SG + T +D A
Sbjct: 623 ILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRSGEAVTLVTSNDWRFA 682
Query: 545 GQMIEILEQCGQVVPDAL 562
++I+ILE+ QVVPD L
Sbjct: 683 SELIDILERANQVVPDEL 700
>gi|259500498|ref|ZP_05743400.1| ATP-dependent RNA helicase [Lactobacillus iners DSM 13335]
gi|315653669|ref|ZP_07906589.1| ATP-dependent RNA helicase [Lactobacillus iners ATCC 55195]
gi|259167882|gb|EEW52377.1| ATP-dependent RNA helicase [Lactobacillus iners DSM 13335]
gi|315489031|gb|EFU78673.1| ATP-dependent RNA helicase [Lactobacillus iners ATCC 55195]
Length = 411
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 67 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 126
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 127 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 179
>gi|309807601|ref|ZP_07701551.1| DEAD/DEAH box helicase [Lactobacillus iners LactinV 01V1-a]
gi|308169160|gb|EFO71228.1| DEAD/DEAH box helicase [Lactobacillus iners LactinV 01V1-a]
Length = 387
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 173
>gi|426227120|ref|XP_004007674.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Ovis aries]
Length = 774
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 287 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 345
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 346 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 405
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 406 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 462
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 463 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 515
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 516 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 575
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 576 LIKVLEEANQAINPKLMQL 594
>gi|260550927|ref|ZP_05825133.1| II DNA and RNA helicase [Acinetobacter sp. RUH2624]
gi|424054991|ref|ZP_17792514.1| hypothetical protein W9I_01390 [Acinetobacter nosocomialis Ab22222]
gi|425741916|ref|ZP_18860046.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-487]
gi|260406054|gb|EEW99540.1| II DNA and RNA helicase [Acinetobacter sp. RUH2624]
gi|407438916|gb|EKF45458.1| hypothetical protein W9I_01390 [Acinetobacter nosocomialis Ab22222]
gi|425489651|gb|EKU55954.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-487]
Length = 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 30/338 (8%)
Query: 234 AWIVATAADSIARKEKEGFSFTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHP 291
A++++ D + KE F G P L L ++E A ++ S K L F +H V+L
Sbjct: 56 AFLISVINDLLNNPVKEQ-RFRGEPRALILAPTRELALQIESDAKFLTKFSNLHLVTLLG 114
Query: 292 GAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI 351
G D Q L + + +V+TP RL+ V K + + + LV+D D L + +
Sbjct: 115 GVDFDKQKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSV 174
Query: 352 RQSISGKP-----HTVVFNDCLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVN 405
++ + P T++F+ +Y + + L + + Q + + Q V
Sbjct: 175 KRIVRYSPRKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVY 231
Query: 406 VCA-SDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
V A D+ ++L+ I EP+ KV+ + + + L LK GY +
Sbjct: 232 VVAKQDKYRLLQDI----------LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGML 281
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILT 521
S I + + ++ MI D ++ + V V +F + + +YV +
Sbjct: 282 SGEIAQDKRLKMLEQFKQGKHNIMIATD-VAGRGIHVDGVSHVINFTLPEQSDDYVHRIG 340
Query: 522 SMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
R G+ SF ++DDA + + EI + G+ +P
Sbjct: 341 RTGRAGAQGVSISFLSEDDAFY---LPEIEKAIGKKLP 375
>gi|322792753|gb|EFZ16586.1| hypothetical protein SINV_00105 [Solenopsis invicta]
Length = 643
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 128/322 (39%), Gaps = 20/322 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT-------VSLHPGAAIDHQITGLRSCEPE 308
GP +L + ++E A ++ GI V ++ G + Q+ + S +
Sbjct: 297 GPNVLVMAPTRELALQIEKEVAKYSYRGIKAYLKNYLRVCVYGGGSRKAQVATV-SSGVQ 355
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDC 367
+++TP RL LV +DVS V+ L++D D + IR+++ G +P
Sbjct: 356 IVIATPGRLNDLVQANILDVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPDRQT---V 412
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN--VCASDEEKILKGIQVLDHAY 425
+T + P L S + L V S + SV + D+++ + +
Sbjct: 413 MTSATWPQGVRRLAQSYMKNPLQVFVGSLDLAAVHSVTQKIYMVDQDEKTEYMHQFFQEM 472
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
G H K + GK SK ++ S L + + D +
Sbjct: 473 GPHD-----KAIVFFGKKSKVDDISSDLALSNIECQSIHGDRDQADREQALEDLKSGTVQ 527
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ D S ++E+ V+ DF ++ YV + R +G +F T+ D HA
Sbjct: 528 ILLATDVASRGIDIEDVTHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRQDWHHA 587
Query: 545 GQMIEILEQCGQVVPDALRDLC 566
+I+ILE+ Q VP+ + +
Sbjct: 588 KALIDILEEANQEVPEEVYKMA 609
>gi|301120732|ref|XP_002908093.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262103124|gb|EEY61176.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 564
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 156/380 (41%), Gaps = 37/380 (9%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIARKEKEGFSF 254
D P + S + W +S +DI+ ET + I ++ IA + +
Sbjct: 169 DKPTPIQS---QCWPILASGRDIIGIAETGSGKTLAFSIPGLI-----HIAAQPEVSHKH 220
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
GP +L + ++E A + +V K G+ ++ ++ G Q LR +V+T
Sbjct: 221 PGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKALRDGV-HVVVAT 279
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV 373
P RL LV ++ ++S V+ +V+D D + IR +I G H + T
Sbjct: 280 PGRLKDLVEERSCNLSKVTFVVLDEADRMLDEGFEKDIR-AIIGSTHPERQIAMFSATWP 338
Query: 374 PAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
++Q L L ++++ + S + Q V V D + + HA +H
Sbjct: 339 QSIQKLAHEFLNDPVKVTIGSDELAASHNVTQIVEVV-EDRARDSRA-----HALLQKYH 392
Query: 431 -SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH-----IKNSVEADGRKRPA 484
S ++L V + + L +G+ NCI H + S + K
Sbjct: 393 ASRKNRILLFVLYKKEADRVERMLHQRGW------NCIAIHGDRNQQQRSEAVEQFKSGE 446
Query: 485 VSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
V ++ ++ L+ E V+ F +++++YV + R G H+FFT +D
Sbjct: 447 VPLLIATDVAARGLDIPGVEYVMNYSFPLTIEDYVHRIGRTGRGGKKGTAHTFFTANDKP 506
Query: 543 HAGQMIEILEQCGQVVPDAL 562
AG+++ +L + Q VP L
Sbjct: 507 RAGELVNLLRESNQEVPKDL 526
>gi|312871823|ref|ZP_07731911.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 3008A-a]
gi|311092765|gb|EFQ51121.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 3008A-a]
Length = 405
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 173
>gi|169633001|ref|YP_001706737.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii SDF]
gi|169151793|emb|CAP00614.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii]
Length = 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 245
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGK 301
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 302 HNIMIATD-VAGRGIHVEGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA 360
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 361 FY---LPEIEKAIGKKLP 375
>gi|302191187|ref|ZP_07267441.1| superfamily II DNA/RNA helicase [Lactobacillus iners AB-1]
gi|312872961|ref|ZP_07733021.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 2062A-h1]
gi|311091483|gb|EFQ49867.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 2062A-h1]
Length = 405
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 173
>gi|301757526|ref|XP_002914626.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17-like [Ailuropoda melanoleuca]
Length = 775
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 288 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 346
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 347 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 406
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 407 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 463
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 464 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 516
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 517 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 576
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 577 LIKVLEEANQAINPKLMQL 595
>gi|407939753|ref|YP_006855394.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
gi|407897547|gb|AFU46756.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
KKS102]
Length = 405
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 34/299 (11%)
Query: 260 LFLVSSQEKAAKVRSVCK--------PLK---AFGIHTVSLHPGAAIDHQITGLRSCEPE 308
L LV ++E AA+V V + PLK FG G +I+ Q+ GLR +
Sbjct: 56 LVLVPTRELAAQVGEVLRSLAQHLQQPLKIAIVFG--------GVSINPQMLGLRGGA-D 106
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFN 365
+V+TP RLL LV A+ +S V+ LV+ DRL L + L + + + + F+
Sbjct: 107 IVVATPGRLLDLVDHNALRLSAVAHLVLDEADRLLDLGFAEELQRVLALLPARRQNLFFS 166
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+V A+ + LL + R+ + ++ ++ A +++ V S + Q+L H
Sbjct: 167 ATFP-AAVQALADGLLQNPVRVEVPHTLGNEPAIEQRAIAVDGS------RRTQLLRHLV 219
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
+H S +VL V +++ L G + + +N V + +
Sbjct: 220 KEHNWS---RVLVFVATQYAAEHVAEKLYKAGIYATPFHGGLSQGARNQVLQEFKDERWQ 276
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++ + V+ D S +YV + R SG+ SF T D AH
Sbjct: 277 VVVTTDLAARGIDIAQLPAVVNYDLPRSAVDYVHRIGRTGRAGESGMAVSFVTADAEAH 335
>gi|355784988|gb|EHH65839.1| hypothetical protein EGM_02689, partial [Macaca fascicularis]
Length = 731
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 244 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 302
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 303 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 363 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 419
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 420 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 472
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 533 LIKVLEEANQAINPKLMQL 551
>gi|126642301|ref|YP_001085285.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ATCC
17978]
Length = 358
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 50 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 109
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 110 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 169
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 170 TFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 220
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 221 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGK 276
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 277 HNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA 335
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 336 FY---LPEIEKAIGKKLP 350
>gi|440903013|gb|ELR53727.1| Putative ATP-dependent RNA helicase DDX17, partial [Bos grunniens
mutus]
Length = 731
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 244 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 302
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 303 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 363 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 419
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 420 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 472
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 533 LIKVLEEANQAINPKLMQL 551
>gi|301762406|ref|XP_002916625.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Ailuropoda melanoleuca]
Length = 706
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 17/313 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ +V ++ G + QI L+ + +++TP
Sbjct: 316 GPGMLVLTPTRELALQVEAECSKYSYKGLKSVCIYGGGDRNGQIQDLKKGV-DIIIATPG 374
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L +++ V+ LV+D D L G +++ + +P +T + P
Sbjct: 375 RLNDLQMNNFVNLRSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDR---QTIMTSATWP 431
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSE 432
L S + + V + + +V N+ + EE+ IQ + S
Sbjct: 432 YAVRRLAQSYLKEPMIVYVGTLDLMAVSTVKQNIIVTTEEEKCSHIQTFLESM-----SP 486
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
KV+ V + + +L S L + S+ S N S + ++E K V ++
Sbjct: 487 KDKVIVFVSRKATADHLSSDLILRHVSVESLHGNREQSDRERALE--NFKTGKVRILIAT 544
Query: 492 HISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
+++ L+ ++ V DF +++ YV + R +GI + T++D AG++I
Sbjct: 545 DLASRGLDVLDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGISITLLTRNDWRVAGELIN 604
Query: 550 ILEQCGQVVPDAL 562
ILE+ Q +P+ L
Sbjct: 605 ILERAQQSIPEDL 617
>gi|445430870|ref|ZP_21438629.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC021]
gi|444760498|gb|ELW84948.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC021]
Length = 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 26/336 (7%)
Query: 234 AWIVATAADSIARKEKEGFSFTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHP 291
A++++ D + KE F G P L L ++E A ++ S K L F +H V+L
Sbjct: 56 AFLISVINDLLNNPVKEQ-RFRGEPRALILAPTRELALQIESDAKFLTKFSNLHLVTLLG 114
Query: 292 GAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI 351
G D Q L + + +V+TP RL+ V K + + + LV+D D L + +
Sbjct: 115 GVDFDKQKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSV 174
Query: 352 RQSISGKP-----HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNV 406
++ + P T++F+ +Y + + L + + + + + + V
Sbjct: 175 KRIVRYSPRKEQRQTLMFSATFSYDVLNLARQWLFEPVT-VEIEPEQKTNNDVEQRVYVV 233
Query: 407 CASDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSN 465
D+ ++L+ I EP+ KV+ + + + L LK GY + S
Sbjct: 234 AKQDKYRLLQDI----------LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSG 283
Query: 466 CIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSM 523
I + + ++ MI D ++ + V V +F + + +YV +
Sbjct: 284 EIAQDKRLKMLEQFKQGKHNIMIATD-VAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRT 342
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
R G+ SF ++DDA + + EI + G+ +P
Sbjct: 343 GRAGAQGVSISFLSEDDAFY---LPEIEKAIGKKLP 375
>gi|66805957|ref|XP_636700.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
gi|74896924|sp|Q54IV3.1|DDX42_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName:
Full=DEAD box protein 42
gi|60465098|gb|EAL63199.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
Length = 986
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 30/328 (9%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVST 313
GP LFL ++E A ++ K K F + T L+ G + Q L++ CE +V+T
Sbjct: 378 GPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCE--IIVAT 435
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTY 370
P RL+ ++ LKA ++ VS LV+D D + G + I + T++F+
Sbjct: 436 PGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFK- 494
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK--ILKGIQVLDHAYGDH 428
+V +L ++S+ + S ++ I Q V V SD +K L L + G
Sbjct: 495 PNVEEFARTILSDPIKISIGM-IGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQG-- 551
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR----KRPA 484
VL V + L S L G+ C + KN +E K
Sbjct: 552 ------SVLIFVSTKVAVEQLSSNLTKFGF-----QTCTLHGDKNQIERSQTIQTFKEGK 600
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAA 542
++++ ++ L+ + V ++ S ++++ + R +G+ ++ T D
Sbjct: 601 INILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIH 660
Query: 543 HAGQMIEILEQCGQVVPDALRDLCHTSP 570
+ +I+ LE Q VP L D+ +P
Sbjct: 661 FSVDLIKNLESASQFVPPELIDVAMNNP 688
>gi|119480453|ref|XP_001260255.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|134034069|sp|A1DG51.1|DBP3_NEOFI RecName: Full=ATP-dependent RNA helicase dbp3
gi|119408409|gb|EAW18358.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 503
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 28/301 (9%)
Query: 279 LKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLL 334
L FG I ++ G D Q L++ +V+TP RL L + ++D+ V L
Sbjct: 179 LSKFGASVDIRVTCIYGGVKKDEQREALKTAA--IVVATPGRLKDLQNDGSVDLGKVKYL 236
Query: 335 VVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---LLGSINRL 387
V+D D L KG D +IR K TV+F T T P+V++L + S +
Sbjct: 237 VLDEADRMLDKGFEQDIKDIIRSMPDSKRQTVMF----TATWPPSVRDLAATFMTSAVTV 292
Query: 388 SL--NQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS- 444
++ + S ++ I+ V +EK + +Q+L+ + + + V + K++
Sbjct: 293 TIGGDPSADPRANTRIKQVVEVVKPQEKEARLVQLLNRSQRGAAVCDKVLVFCLYKKEAV 352
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIK-NSVEADGRKRPAVSMIDKDHISTAELE--EY 501
+ + L L+ K + ++ + H + S+EA K A +++ ++ L+
Sbjct: 353 RVERL---LRTKNFKVAGIHGDLNQHERFKSLEA--FKTGAATVLVATDVAARGLDIPSV 407
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
++VI F +++++YV + R G + FT+ D A +G +I +L Q VPDA
Sbjct: 408 KLVINVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVLRAAKQDVPDA 467
Query: 562 L 562
L
Sbjct: 468 L 468
>gi|148613856|ref|NP_001091974.1| probable ATP-dependent RNA helicase DDX17 isoform 3 [Homo sapiens]
Length = 731
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 244 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 302
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 303 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 363 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 419
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 420 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 472
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 533 LIKVLEEANQAINPKLMQL 551
>gi|38201710|ref|NP_006377.2| probable ATP-dependent RNA helicase DDX17 isoform 1 [Homo sapiens]
gi|380865374|sp|Q92841.2|DDX17_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17; AltName: Full=DEAD box protein
p72; AltName: Full=RNA-dependent helicase p72
gi|110611789|gb|AAH00595.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Homo sapiens]
Length = 729
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 244 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 302
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 303 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 363 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 419
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 420 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 472
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 533 LIKVLEEANQAINPKLMQL 551
>gi|296087640|emb|CBI34896.3| unnamed protein product [Vitis vinifera]
Length = 1180
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 140/323 (43%), Gaps = 28/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K ++ + L+ GA Q+ L + +V+TP
Sbjct: 94 GPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGA-DIVVATP 152
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYT 371
RL ++ ++ + + VS LV+D D + IR+ + P T+++
Sbjct: 153 GRLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKE 212
Query: 372 SVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHA 424
+LL+ + N ++++ VA+++ I Q V V E E+IL+
Sbjct: 213 VRKIAADLLVNPVQVNIGNVDELVANKA--ITQYVEVLPYMEKHKRLEQILRS------- 263
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
EP + I K + ++ + + + ++ V R +
Sbjct: 264 ------QEPGSKIIIFCSTKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRS 317
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++++ VVI DF +++YV + R +G+ ++FF + DA +
Sbjct: 318 PVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKY 377
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
A ++++LE Q VP +RD+
Sbjct: 378 ASDLVKVLEGANQRVPPEIRDMA 400
>gi|445448034|ref|ZP_21443839.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-92]
gi|444758217|gb|ELW82718.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-92]
Length = 383
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 245
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGK 301
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 302 HNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA 360
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 361 FY---LPEIEKAIGKKLP 375
>gi|387542724|gb|AFJ71989.1| putative ATP-dependent RNA helicase DDX17 isoform 3 [Macaca
mulatta]
Length = 731
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 244 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 302
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 303 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 363 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 419
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 420 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 472
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 533 LIKVLEEANQAINPKLMQL 551
>gi|387540018|gb|AFJ70636.1| putative ATP-dependent RNA helicase DDX17 isoform 1 [Macaca
mulatta]
Length = 729
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 244 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 302
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 303 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 363 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 419
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 420 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 472
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 533 LIKVLEEANQAINPKLMQL 551
>gi|345481282|ref|XP_001602397.2| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Nasonia
vitripennis]
Length = 698
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 151/385 (39%), Gaps = 36/385 (9%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL---ETSGSSSTIVQIAWIVATAADSIAR 246
+R E+ +P+ +W I S KD++ +T + + ++ R
Sbjct: 272 IRKQNFEKPSPIQCQAWPILL-----SGKDMIGIAQTGTGKTLAFLLPALIHIDNQDTPR 326
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCE 306
E+ +GP +L + ++E A ++ GI V ++ G Q+ + S
Sbjct: 327 SER-----SGPTVLVMAPTRELALQIEKEVNKYYYHGIKAVCVYGGGDRKKQMN-IVSKG 380
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFN 365
E +++TP RL L+ + +DV VS LV+D D + IR+S+ +P
Sbjct: 381 VEIVIATPGRLNDLIQTEVLDVKCVSYLVLDEADRMLDMGFEPQIRKSLLDIRPDRQT-- 438
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN--VCASDEEK---ILKGIQV 420
+T + P L S + + V S + SV + DEE+ +LK
Sbjct: 439 -VMTSATWPPGVRRLAESYMKSPITVCVGSLDLKAVHSVTQKIWIVDEEEKTDVLK---- 493
Query: 421 LDHAYGDHFH--SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD 478
D FH + KV+ GK K ++ S L G + + + D
Sbjct: 494 ------DFFHNMAPSDKVIVFFGKKCKVDDIGSDLALSGVACQSIHGGREQADREQALED 547
Query: 479 GRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
+ ++ D S ++E+ V DF ++ YV + R +G S T
Sbjct: 548 IKTGDVNILLATDVASRGIDIEDITHVFNYDFPRDIEEYVHRVGRTGRAGKTGESISLVT 607
Query: 538 KDDAAHAGQMIEILEQCGQVVPDAL 562
+ D ++I+ILE+ Q +P L
Sbjct: 608 RRDWGLTKELIKILEEAEQEIPTEL 632
>gi|309810187|ref|ZP_07704032.1| DEAD/DEAH box helicase [Lactobacillus iners SPIN 2503V10-D]
gi|349611561|ref|ZP_08890796.1| hypothetical protein HMPREF1027_00223 [Lactobacillus sp. 7_1_47FAA]
gi|308169459|gb|EFO71507.1| DEAD/DEAH box helicase [Lactobacillus iners SPIN 2503V10-D]
gi|348608654|gb|EGY58634.1| hypothetical protein HMPREF1027_00223 [Lactobacillus sp. 7_1_47FAA]
Length = 405
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 173
>gi|325912059|ref|ZP_08174457.1| DEAD/DEAH box helicase [Lactobacillus iners UPII 143-D]
gi|325476009|gb|EGC79177.1| DEAD/DEAH box helicase [Lactobacillus iners UPII 143-D]
Length = 405
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 173
>gi|254567599|ref|XP_002490910.1| Putative ATP-dependent RNA helicase of the DEAD-box family involved
in ribosomal biogenesis [Komagataella pastoris GS115]
gi|238030707|emb|CAY68630.1| Putative ATP-dependent RNA helicase of the DEAD-box family involved
in ribosomal biogenesis [Komagataella pastoris GS115]
gi|328352552|emb|CCA38951.1| hypothetical protein PP7435_Chr2-1277 [Komagataella pastoris CBS
7435]
Length = 498
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 161/388 (41%), Gaps = 29/388 (7%)
Query: 183 LNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQIAWIVATA 240
L IE +++ + D P + + W D++ +GS T A
Sbjct: 98 LQGIEEKIKNKISQFDKPTTIQAVS---WPYLLKGNDVIGVAETGSGKTFA----FGVPA 150
Query: 241 ADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQI 299
+ +K +G +L + ++E A ++ K L G+ ++ G + D Q
Sbjct: 151 ISHVLQKNSKGLQ-----VLVISPTRELAVQIYDNLKQLTDLCGLECCCIYGGVSKDDQR 205
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSIS 356
++ + + +++TP RLL L+ +ID++G++ LV+D D L KG + + I +++
Sbjct: 206 RQVK--QSQCVIATPGRLLDLMEEGSIDLTGINYLVLDEADRMLEKGFEEAIKSIMANVN 263
Query: 357 GKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC-ASDEEKIL 415
T++F + + + ++ S + I Q V V D+EK L
Sbjct: 264 TDRQTLMFTATWPKEVRELASHFMKSPVKVTVGDRDELSANKKITQIVEVIDPYDKEKKL 323
Query: 416 KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSV 475
+Q+L + K+L + + TL KGY +S + +
Sbjct: 324 --LQLLSK-----YSKNDDKILIFALYKKEATRVERTLNYKGYKVSAIHGDLSQQQRTQS 376
Query: 476 EADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHS 534
D + + ++ D + ++ +VVI F +++++YV + R +GI H+
Sbjct: 377 LNDFKTGKSSLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGKTGIAHT 436
Query: 535 FFTKDDAAHAGQMIEILEQCGQVVPDAL 562
FT+ + +G + IL Q VP+ L
Sbjct: 437 LFTEHEKHLSGALQNILRGANQPVPEEL 464
>gi|218192669|gb|EEC75096.1| hypothetical protein OsI_11255 [Oryza sativa Indica Group]
Length = 1023
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 156/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 267 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG-----PIGVVCAPTRELAHQIY 321
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L++ CE +++TP RL+ L+ +KA+ +
Sbjct: 322 LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE--IVIATPGRLIDLLKMKALKMFRA 379
Query: 332 SLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + IR SI G +P T++F+ + Y + +L I R+
Sbjct: 380 TYLVLDEADRMFDLGFEPQIR-SIVGQIRPDRQTLLFSATMPYKVERLAREILTDPI-RV 437
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V S + I Q VNV SD EK+ ++ L D VL K ++
Sbjct: 438 TVGQ-VGSANEDIKQVVNVLLSDAEKMPWLLEKLPGMIDDG------DVLVFAAKKARVD 490
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ S L +G+ I+ DKD S E + Y
Sbjct: 491 EIESQLNQRGFRIAALHG-----------------------DKDQASRMETLQKFKSGVY 527
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ +
Sbjct: 528 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVR 587
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG+++ L GQ VP+ L DL
Sbjct: 588 FAGELVHCLIAAGQDVPNELMDLA 611
>gi|391335132|ref|XP_003741951.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1171
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + L ++E A ++ C+ KA G+ V ++ G I QI L+ E ++ TP
Sbjct: 581 GPIGVVLTPTRELAMQITKDCRKFAKALGLRVVCVYGGTGISEQIAELKRGA-EIIICTP 639
Query: 315 ERLLKLVSLKAIDVSGV---SLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ +++ + V+ + + +V+D D + G ++R S +P TV+F+
Sbjct: 640 GRMIDMLAANSGRVTNMRRCTYVVLDEADRMFDMGFEPQVMRIIDSVRPDRQTVMFSATF 699
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L+ I L +SV + ++ + S+E+K LK ++VL YG
Sbjct: 700 PRQMEALARRILIKPIEILVGGRSVVCKE---VEQYVLIVSEEDKFLKLLEVLGK-YGAQ 755
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+ + V K L+ L Y+ S I ++S D K +++
Sbjct: 756 GSA-----IIFVDKQEHADALLKDLMTASYNCSVLHGGIDQFDRDSTIVDF-KNGKFNVL 809
Query: 489 DKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
++ L+ ++++V ++ ++YV R G ++F T + ++
Sbjct: 810 VATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQERYSVD 869
Query: 547 MIEILEQCGQVVPDALRDLCHT 568
++ LE +P+ L+ L +T
Sbjct: 870 ILRALEASEATIPEDLQKLYNT 891
>gi|169795350|ref|YP_001713143.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AYE]
gi|184158781|ref|YP_001847120.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ACICU]
gi|215482884|ref|YP_002325087.1| ATP-dependent RNA helicase [Acinetobacter baumannii AB307-0294]
gi|239502877|ref|ZP_04662187.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB900]
gi|260554464|ref|ZP_05826685.1| superfamily II DNA and RNA helicase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|332850462|ref|ZP_08432782.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013150]
gi|332871914|ref|ZP_08440326.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013113]
gi|332875150|ref|ZP_08442983.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6014059]
gi|384143899|ref|YP_005526609.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii
MDR-ZJ06]
gi|387123287|ref|YP_006289169.1| DNA/RNA helicase [Acinetobacter baumannii MDR-TJ]
gi|403673418|ref|ZP_10935715.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. NCTC 10304]
gi|407933404|ref|YP_006849047.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii TYTH-1]
gi|417546745|ref|ZP_12197831.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC032]
gi|417549949|ref|ZP_12201029.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-18]
gi|417551996|ref|ZP_12203066.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-81]
gi|417560504|ref|ZP_12211383.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC137]
gi|417567342|ref|ZP_12218214.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC143]
gi|417569100|ref|ZP_12219958.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC189]
gi|417578007|ref|ZP_12228844.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-17]
gi|417869092|ref|ZP_12514087.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH1]
gi|417874056|ref|ZP_12518915.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH2]
gi|417882420|ref|ZP_12526717.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH4]
gi|421198208|ref|ZP_15655375.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC109]
gi|421203948|ref|ZP_15661079.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC12]
gi|421457373|ref|ZP_15906710.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-123]
gi|421534632|ref|ZP_15980904.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC30]
gi|421620338|ref|ZP_16061275.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC074]
gi|421626256|ref|ZP_16067085.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC098]
gi|421628334|ref|ZP_16069117.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC180]
gi|421633485|ref|ZP_16074114.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-13]
gi|421651643|ref|ZP_16092010.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC0162]
gi|421653977|ref|ZP_16094308.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-72]
gi|421660250|ref|ZP_16100450.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-83]
gi|421664382|ref|ZP_16104522.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC110]
gi|421668451|ref|ZP_16108490.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC087]
gi|421671560|ref|ZP_16111530.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC099]
gi|421674539|ref|ZP_16114468.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC065]
gi|421676931|ref|ZP_16116826.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC111]
gi|421686321|ref|ZP_16126076.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-143]
gi|421691671|ref|ZP_16131330.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-116]
gi|421697429|ref|ZP_16136992.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-692]
gi|421703947|ref|ZP_16143397.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1122]
gi|421707901|ref|ZP_16147282.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1219]
gi|421786842|ref|ZP_16223225.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-82]
gi|421794385|ref|ZP_16230486.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-2]
gi|421795484|ref|ZP_16231567.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-21]
gi|421804221|ref|ZP_16240131.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-694]
gi|421806908|ref|ZP_16242770.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC035]
gi|424051714|ref|ZP_17789246.1| hypothetical protein W9G_00403 [Acinetobacter baumannii Ab11111]
gi|424059338|ref|ZP_17796829.1| hypothetical protein W9K_00452 [Acinetobacter baumannii Ab33333]
gi|424063264|ref|ZP_17800749.1| hypothetical protein W9M_00547 [Acinetobacter baumannii Ab44444]
gi|425750087|ref|ZP_18868054.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-348]
gi|425753378|ref|ZP_18871262.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-113]
gi|445400708|ref|ZP_21430179.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-57]
gi|445460077|ref|ZP_21447986.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC047]
gi|445473935|ref|ZP_21453047.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC338]
gi|445477438|ref|ZP_21454354.1| type III restriction enzyme, res subunit / helicase C-terminal
domain multi-domain protein [Acinetobacter baumannii
Naval-78]
gi|445492428|ref|ZP_21460375.1| DEAD/DEAH box helicase [Acinetobacter baumannii AA-014]
gi|169148277|emb|CAM86142.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii AYE]
gi|183210375|gb|ACC57773.1| Superfamily II DNA and RNA helicase [Acinetobacter baumannii ACICU]
gi|193077811|gb|ABO12683.2| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii ATCC
17978]
gi|213986779|gb|ACJ57078.1| ATP-dependent RNA helicase rhlB [Acinetobacter baumannii
AB307-0294]
gi|260411006|gb|EEX04303.1| superfamily II DNA and RNA helicase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|332730733|gb|EGJ62044.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013150]
gi|332731128|gb|EGJ62429.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013113]
gi|332736594|gb|EGJ67588.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6014059]
gi|342229810|gb|EGT94660.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH2]
gi|342231499|gb|EGT96308.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH1]
gi|342237781|gb|EGU02234.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH4]
gi|347594392|gb|AEP07113.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii
MDR-ZJ06]
gi|385877779|gb|AFI94874.1| DNA/RNA helicase, superfamily II [Acinetobacter baumannii MDR-TJ]
gi|395523086|gb|EJG11175.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC137]
gi|395553014|gb|EJG19022.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC143]
gi|395553323|gb|EJG19329.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC189]
gi|395566176|gb|EJG27821.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC109]
gi|395568704|gb|EJG29374.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-17]
gi|398326489|gb|EJN42636.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC12]
gi|400207097|gb|EJO38068.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-123]
gi|400384633|gb|EJP43311.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC032]
gi|400387917|gb|EJP50990.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-18]
gi|400392255|gb|EJP59301.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-81]
gi|404558190|gb|EKA63474.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-692]
gi|404562280|gb|EKA67504.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-116]
gi|404568923|gb|EKA74018.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-143]
gi|404665270|gb|EKB33233.1| hypothetical protein W9G_00403 [Acinetobacter baumannii Ab11111]
gi|404670076|gb|EKB37968.1| hypothetical protein W9K_00452 [Acinetobacter baumannii Ab33333]
gi|404674832|gb|EKB42568.1| hypothetical protein W9M_00547 [Acinetobacter baumannii Ab44444]
gi|407190994|gb|EKE62205.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1219]
gi|407191116|gb|EKE62326.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1122]
gi|407901985|gb|AFU38816.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii TYTH-1]
gi|408507576|gb|EKK09270.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC0162]
gi|408511827|gb|EKK13474.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-72]
gi|408695527|gb|EKL41082.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC098]
gi|408700633|gb|EKL46081.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC074]
gi|408705274|gb|EKL50616.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-83]
gi|408706015|gb|EKL51339.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-13]
gi|408707441|gb|EKL52725.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC180]
gi|408712679|gb|EKL57862.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC110]
gi|409987522|gb|EKO43703.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC30]
gi|410380343|gb|EKP32931.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC087]
gi|410381522|gb|EKP34087.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC099]
gi|410383839|gb|EKP36358.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC065]
gi|410393888|gb|EKP46239.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC111]
gi|410394532|gb|EKP46860.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-2]
gi|410401981|gb|EKP54116.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-21]
gi|410410452|gb|EKP62356.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-82]
gi|410411592|gb|EKP63461.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-694]
gi|410417451|gb|EKP69221.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC035]
gi|425487489|gb|EKU53847.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-348]
gi|425497990|gb|EKU64079.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-113]
gi|444763667|gb|ELW88003.1| DEAD/DEAH box helicase [Acinetobacter baumannii AA-014]
gi|444768647|gb|ELW92858.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC338]
gi|444773312|gb|ELW97408.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC047]
gi|444776516|gb|ELX00558.1| type III restriction enzyme, res subunit / helicase C-terminal
domain multi-domain protein [Acinetobacter baumannii
Naval-78]
gi|444783282|gb|ELX07143.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-57]
gi|452950728|gb|EME56182.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii MSP4-16]
Length = 383
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 245
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGK 301
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 302 HNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA 360
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 361 FY---LPEIEKAIGKKLP 375
>gi|348521007|ref|XP_003448018.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Oreochromis niloticus]
Length = 633
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 162/396 (40%), Gaps = 26/396 (6%)
Query: 173 DCPSKFLILCLNAIENAMRHDGVEQD--NPLFVNSWGIEFWKCYSSAKDI--LETSGSSS 228
DCP + A + + V+Q+ P + S G W S KD+ + +GS
Sbjct: 92 DCPKPIVKFHEAAFPSYVMDVIVKQNWTEPTPIQSQG---WPVALSGKDMVGIAQTGSGK 148
Query: 229 TIVQIAWIVATAADSIARKEKEGF--SFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIH 285
T+ A +I + + F GP L L ++E A +V+ V +A +
Sbjct: 149 TL-------AYLLPAIVHIQHQPFLEHGDGPICLVLAPTRELAQQVQQVAAEYGRASRLK 201
Query: 286 TVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKG 345
+ ++ GA QI L E ++TP RL+ + ++ + LV+D D +
Sbjct: 202 STCIYGGAPKGPQIRDLERGV-EICIATPGRLIDFLECGKTNLRRCTYLVLDEADRMLDM 260
Query: 346 DTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQS 403
IR+ + +P T+ V + L ++++ S + I+Q
Sbjct: 261 GFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQINIGALQLSANHNILQI 320
Query: 404 VNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTG 463
V+VC +D EK K I++L+ + + K + V + L ++ G+
Sbjct: 321 VDVC-NDLEKEDKLIRLLEEIMSEKEN----KTIIFVETKRRCDELTRRMRRDGWPAMGI 375
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTS 522
++ V + R A +I D S ++E+ + VI D+ S ++Y+ +
Sbjct: 376 HGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGR 435
Query: 523 MARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
AR +G ++FFT ++ A +I +L + Q +
Sbjct: 436 TARSQKTGTAYTFFTPNNMKQASDLISVLREANQAI 471
>gi|62088770|dbj|BAD92832.1| DEAD box polypeptide 17 isoform p82 variant [Homo sapiens]
Length = 737
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 246 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 304
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 305 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 364
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 365 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 421
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 422 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 474
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 475 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 534
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 535 LIKVLEEANQAINPKLMQL 553
>gi|421894731|ref|ZP_16325216.1| DEAD/DEAH box helicase family protein [Pediococcus pentosaceus
IE-3]
gi|385272339|emb|CCG90588.1| DEAD/DEAH box helicase family protein [Pediococcus pentosaceus
IE-3]
Length = 438
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL L SQE A + V + A G+ S+ GA + QI L+ +PE +V TP
Sbjct: 61 GTQLLVLSPSQELAIQTTDVFREWAALIGLRVTSITGGANVQRQIERLKK-KPEIVVGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ 353
R+L L++ + + VS + LV+D D L G+ L RQ
Sbjct: 120 GRVLTLINERRLKVSEIQSLVIDEADELLTGENLEGTRQ 158
>gi|308496397|ref|XP_003110386.1| hypothetical protein CRE_05666 [Caenorhabditis remanei]
gi|308243727|gb|EFO87679.1| hypothetical protein CRE_05666 [Caenorhabditis remanei]
Length = 562
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 155/372 (41%), Gaps = 31/372 (8%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +DI+ +GS T+ + + R+ EG P +L L+ ++E
Sbjct: 163 WPIAMSGRDIISIAKTGSGKTLAFMLPALVHTTKQPHRQRGEG-----PSVLVLLPTREL 217
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +V+ V + G+ L GA+ Q L + +V+TP RLL + +
Sbjct: 218 AQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGV-DVVVATPGRLLDFLDNGTTN 276
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYTSVPAVQNLLLGSI 384
+ S LV+D D + IR+ I +P T++F+ V ++ +
Sbjct: 277 MKRCSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMFSATWP-KEVRSMASDFQKDA 335
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
L++ + + I Q V++ + K K + +L+ + + K + V
Sbjct: 336 AFLNVGSLELAANHNITQVVDIL-EEHGKQAKLMDLLNQI----MNQKECKTIIFVETKR 390
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD-------GRKRPAVSMIDKDHISTAE 497
K L ++ G+ + CI KN E D K P + D +
Sbjct: 391 KADELTRAMRRDGWP----TLCIHGD-KNQGERDWVLQEFKAGKTPILLATDV-AARGLD 444
Query: 498 LEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQV 557
+++ + VI D+ + ++YV + R G ++FFT +A+ A ++++L++ Q
Sbjct: 445 VDDIKFVINYDYPNNSEDYVHRIGRTGRRDKKGTAYTFFTHTNASKAKDLLKVLDEAKQT 504
Query: 558 VPDALRDLCHTS 569
VP ALRD+ + S
Sbjct: 505 VPQALRDMANRS 516
>gi|393215693|gb|EJD01184.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 868
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 33/329 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP LK + V + G+ I QI ++ E +V TP
Sbjct: 274 GPMAIVMTPTRELATQIHRECKPFLKVLNLRAVCAYGGSPIKDQIAEMKKGA-EIIVCTP 332
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ V+ LV+D D + G +++ + +P TV+F+
Sbjct: 333 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVGNIRPDRQTVLFS--- 389
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ P + L I + L +V +S A I+ + +E K + +++L G
Sbjct: 390 --ATFPKQMDSLARKILKKPLEITVGGRSVVAAEIEQIVEVRVEETKFHRLLEIL----G 443
Query: 427 DHFHSEP-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR---- 480
++ +P + L V + NL+ L KGY C+ H K+ V+ D
Sbjct: 444 QMYNEDPECRTLIFVDRQEAADNLLRELLRKGYL------CMSLHGGKDQVDRDQTIADF 497
Query: 481 KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
K V ++ ++ L+ + ++VI D M++YV R G +F T
Sbjct: 498 KAGFVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 557
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+ ++ + L VP L DL +
Sbjct: 558 EQDRYSVDLFRALRASNAKVPQELEDLAN 586
>gi|66800751|ref|XP_629301.1| hypothetical protein DDB_G0293064 [Dictyostelium discoideum AX4]
gi|60462682|gb|EAL60884.1| hypothetical protein DDB_G0293064 [Dictyostelium discoideum AX4]
Length = 573
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 153/395 (38%), Gaps = 55/395 (13%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+ P V S G W S D+L S GS T+ + A + I + ++ + +
Sbjct: 160 EKPTPVQSLG---WPIALSGSDMLGISKTGSGKTLS----FILPAIEHILAQPRQSY-YP 211
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L + ++E A ++ + L+ I +++ GA Q L S P+ +V TP
Sbjct: 212 GPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQL-SRRPKIVVGTP 270
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-----KPHTVVFNDCLT 369
R++ + + + +S LVVD D L + Q I G +P V T
Sbjct: 271 GRIIDFMESGDLSLKNISFLVVDEADRLMEMG----FEQQIDGIFNSIRPDRQVLYWSAT 326
Query: 370 YT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ V + + + RL + S + + I Q + +D +K+ + L Y
Sbjct: 327 WPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVDALMDTLGEIY--- 383
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKG------YSISTGSNCIVSHIKNSVEADGRKR 482
D K Q L+ T+ KG Y S G N + + V+ + R+R
Sbjct: 384 ------------SADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRER 431
Query: 483 -------PAVSMIDKDHISTAELEEYEVVIVPDFIISM--KNYVEILTSMARHTVSGILH 533
+ ++ +++ L+ + V +F + + YV + R G H
Sbjct: 432 IVQDFKNKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGALGTSH 491
Query: 534 SFFTK---DDAAHAGQMIEILEQCGQVVPDALRDL 565
S + DD G + +L++ Q VP D+
Sbjct: 492 SILSNNSLDDMELVGDLTNLLQRSEQEVPSEFLDI 526
>gi|389747348|gb|EIM88527.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 688
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 155/368 (42%), Gaps = 34/368 (9%)
Query: 216 SAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +D++ +GS T+ + + D ++ EG P + + ++E A ++
Sbjct: 133 SGRDVIGVAKTGSGKTVAFLLPVFRHIKDQRPLEQMEG-----PIAIIMTPTRELAVQIH 187
Query: 274 SVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVS 329
CKP LK + V + G+ I QI ++ E +V TP R++ L+ S + ++
Sbjct: 188 RDCKPFLKVLNLRAVCAYGGSPIKDQIADMKKGA-EIIVCTPGRMIDLLTANSGRVTNLK 246
Query: 330 GVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINR 386
V+ LV+ DR+ + + I +I T++F+ + P + L I R
Sbjct: 247 RVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTLLFS-----ATFPKQMDSLARKILR 301
Query: 387 LSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
L +V +S A I + +E K + ++VL Y + + + L V +
Sbjct: 302 KPLEITVGGRSVVAAEIDQIVEVRPEETKFNRLLEVLGQMYNEDPEA---RTLIFVDRQE 358
Query: 445 KFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEY 501
NL+ L KGY S+ G + + ++S AD K V ++ ++ L+
Sbjct: 359 AADNLLRELMRKGYLCMSLHGGKDQV---DRDSTIADF-KAGVVPIVIATSVAARGLDVK 414
Query: 502 EVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
++ +V +F M++YV R G +F T + ++ + L+ VP
Sbjct: 415 QLKLVINFDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQDRYSVDIYRALKASNANVP 474
Query: 560 DALRDLCH 567
L +L +
Sbjct: 475 QELEELAN 482
>gi|355683242|gb|AER97060.1| DEAD box polypeptide 17 [Mustela putorius furo]
Length = 730
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 246 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 304
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 305 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 364
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 365 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 421
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K+ E D R A +
Sbjct: 422 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPIL 474
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 475 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 534
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 535 LIKVLEEANQAINPKLMQL 553
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 156/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG-----PIGVICAPTRELAHQIY 309
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L++ CE +++TP RL+ L+ +KA+ +
Sbjct: 310 LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE--VVIATPGRLIDLLKMKALKMFRA 367
Query: 332 SLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + + S++ Q G+ T++F+ + Y + +L I R+
Sbjct: 368 TYLVLDEADRMFDLGFEPQIRSIVGQIRPGR-QTLLFSATMPYKVERLAREILTDPI-RV 425
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V + I Q VNV SD EK+ ++ L D VL K ++
Sbjct: 426 TVGQ-VGGANEDIKQVVNVIPSDAEKMPWLLEKLPGMIDDG------DVLVFASKKARVD 478
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ L +G+ I+ DKD S E + Y
Sbjct: 479 EIERELNQRGFRIAALHG-----------------------DKDQASRMETLQKFKSGTY 515
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ +A
Sbjct: 516 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEAR 575
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG++++ L GQ VP+ L DL
Sbjct: 576 FAGELVQSLIAAGQDVPNELMDLA 599
>gi|384131186|ref|YP_005513798.1| rhlB [Acinetobacter baumannii 1656-2]
gi|385238196|ref|YP_005799535.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii
TCDC-AB0715]
gi|416147350|ref|ZP_11601728.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB210]
gi|322507406|gb|ADX02860.1| rhlB [Acinetobacter baumannii 1656-2]
gi|323518696|gb|ADX93077.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii
TCDC-AB0715]
gi|333365581|gb|EGK47595.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB210]
Length = 389
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 81 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 140
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 141 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 200
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 201 TFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 251
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 252 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGK 307
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 308 HNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA 366
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 367 FY---LPEIEKAIGKKLP 381
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 156/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 250 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG-----PIGVICAPTRELAHQIY 304
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L++ CE +V+TP RL+ L+ +KA+ +
Sbjct: 305 LEAKKFAKPYNLQVAAVYGGVSKFDQFKELKAGCE--IVVATPGRLIDLLKMKALKMFRA 362
Query: 332 SLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + IR SI G +P T++F+ + Y + +L I R+
Sbjct: 363 TYLVLDEADRMFDLGFEPQIR-SIVGQIRPDRQTLLFSATMPYKVERLAREILSDPI-RV 420
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V S + I Q VNV SD EK+ I+ + D VL K ++
Sbjct: 421 TVGQ-VGSANEDIKQVVNVLPSDAEKMPWLIEKMPGMIDDG------DVLVFAAKKARVD 473
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ + L +G+ ++ DKD S E + Y
Sbjct: 474 EIENQLNQRGFKVAALHG-----------------------DKDQASRMETLQNFKSGTY 510
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ +
Sbjct: 511 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKETR 570
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG+++ L GQ VP+ L DL
Sbjct: 571 FAGELVHSLIAAGQDVPNELMDLA 594
>gi|116492385|ref|YP_804120.1| superfamily II DNA/RNA helicase [Pediococcus pentosaceus ATCC
25745]
gi|116102535|gb|ABJ67678.1| Superfamily II DNA and RNA helicase [Pediococcus pentosaceus ATCC
25745]
Length = 438
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL L SQE A + V + A G+ S+ GA + QI L+ +PE +V TP
Sbjct: 61 GTQLLVLSPSQELAIQTTDVFREWAALIGLRVTSITGGANVQRQIERLKK-KPEIVVGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ 353
R+L L++ + + VS + LV+D D L G+ L RQ
Sbjct: 120 GRVLTLINERRLKVSEIQSLVIDEADELLTGENLEGTRQ 158
>gi|196230475|ref|ZP_03129337.1| DEAD/DEAH box helicase domain protein [Chthoniobacter flavus
Ellin428]
gi|196225405|gb|EDY19913.1| DEAD/DEAH box helicase domain protein [Chthoniobacter flavus
Ellin428]
Length = 591
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 131/321 (40%), Gaps = 27/321 (8%)
Query: 239 TAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF--GIHTVSLHPGAAID 296
TAA +I E+ + P +L L ++E A +V L F G+ + ++ G + D
Sbjct: 55 TAAFAIPAIERVDGNLRAPQVLILCPTRELAMQVAEEVAKLAFFKRGVRELPIYGGQSYD 114
Query: 297 HQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQ 353
Q+ GLR + ++ TP R++ + K + + V ++++D D L G D + I
Sbjct: 115 RQLRGLRDGA-QIIIGTPGRVMDHLERKTLRLDQVGMIILDEADRMLDMGFRDDIETILG 173
Query: 354 SISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQS---ACIIQSVNVC--A 408
+ TV F+ ++P N L+ + +N + +Q I QS
Sbjct: 174 QAPAERQTVFFS-----ATMPPAINQLVKKYTKEPVNVRIQAQEMTVPAIDQSYYEVDRR 228
Query: 409 SDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIV 468
S E + + I + D YG F + + V L LK +GYS I
Sbjct: 229 SKLEVLCRLIDLQDIKYGIIFCATKMMV----------DELSDHLKARGYSSDKLHGDIS 278
Query: 469 SHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHT 527
++ V A RKR ++ D + ++++ EVV D ++YV + R
Sbjct: 279 QSMRERVVAKFRKRGFEFLVATDVAARGLDVDDIEVVFNYDLPQDAEDYVHRIGRTGRAG 338
Query: 528 VSGILHSFFTKDDAAHAGQMI 548
SG +F + Q+I
Sbjct: 339 RSGRAVTFVAGREIWKMQQII 359
>gi|167522064|ref|XP_001745370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776328|gb|EDQ89948.1| predicted protein [Monosiga brevicollis MX1]
Length = 498
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 159/385 (41%), Gaps = 33/385 (8%)
Query: 195 VEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGF 252
++ +NP + + I S +D+L +G T+ + ++ D RK +G
Sbjct: 78 LKYENPTPIQAQAIP---VVMSGRDMLGIAKTGCGKTLAFLLPLLRHVMDQ--RKCAQGE 132
Query: 253 SFTGPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPE 308
+ G L + ++E A ++ R CK L + V L+ G+ I QI L+S E
Sbjct: 133 ASPGCIGLIMSPTRELALQIYNETRKFCKHLD---LRVVCLYGGSDISDQIALLKSA-AE 188
Query: 309 FLVSTPERLLKLVSLKAIDVSG------VSLLVVDRLDSLSKGDTLSLIRQSISGKPHTV 362
+V TP R++ ++++ + V+ V+L DR+ + ++ I +I TV
Sbjct: 189 IIVCTPGRMIDMLTVNSGRVTNLRRCTYVALDEADRMFDMGFEPQVTRILDNIRPDRQTV 248
Query: 363 VFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLD 422
+F+ + +L + +S+ S II+ + + EK K +++L
Sbjct: 249 MFSATFPRAMEALARKILTKPVEVTVGGRSIVSN---IIKQNVIVMREGEKFQKLLELLG 305
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
H + E ++ V K K +++ L GY + + S D R
Sbjct: 306 HFF------EQGSIIVFVHKQEKADSVLENLIKNGYPCLALHGAVSQEDRASNLRDFRA- 358
Query: 483 PAVSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDD 540
V ++ I+ L+ ++ +V ++ ++YV R G ++F T DD
Sbjct: 359 GNVKIMVATSIAARGLDVKQLCLVVNYDCPNHYEDYVHRCGRTGRAGREGTAYTFLTADD 418
Query: 541 AAHAGQMIEILEQCGQVVPDALRDL 565
+AG +I L VP+ L+ L
Sbjct: 419 KKYAGNIIRALHASKAQVPEDLQKL 443
>gi|363749123|ref|XP_003644779.1| hypothetical protein Ecym_2213 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888412|gb|AET37962.1| Hypothetical protein Ecym_2213 [Eremothecium cymbalariae
DBVPG#7215]
Length = 554
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 25/293 (8%)
Query: 289 LHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG-- 345
L+ G D Q L++ + +V+TP RLL L+ D+S V LV+D D L KG
Sbjct: 247 LYGGVPKDAQRLQLKNSQ--IVVATPGRLLDLIQEGYADLSQVQYLVLDEADRMLEKGFE 304
Query: 346 -DTLSLIRQSISGKPHTVVFNDC-------LTYTSVPAVQNLLLGSINRLSLNQSVASQS 397
D +I+++ + T++F L T + + +G+ + LS N+ +
Sbjct: 305 EDIKKIIKETDVTRRQTLMFTATWPKEVRELASTFMKHPVKISIGNRDELSANKKIK--- 361
Query: 398 ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKG 457
Q V V +++ + + G + KVL + + L+ G
Sbjct: 362 ----QIVEVIDPFQKEKKLLELLKKYHSGSKKNE---KVLIFALYKKEASRVERNLQYNG 414
Query: 458 YSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNY 516
Y+++ + + D + ++ D + ++ + VI F +++++Y
Sbjct: 415 YNVAAIHGDLSQQQRTQALDDFKSGKTNLLLATDVAARGLDIPNVKTVINLTFPLTVEDY 474
Query: 517 VEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL-CHT 568
V + R SG H+ FT+ + +G +I +L Q GQ VP+ L+ HT
Sbjct: 475 VHRIGRTGRAGASGTAHTLFTEQEKHLSGALINVLNQAGQAVPEELKKFGTHT 527
>gi|116207046|ref|XP_001229332.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
gi|118597490|sp|Q2HAD8.1|PRP5_CHAGB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|88183413|gb|EAQ90881.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
Length = 1064
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 148/324 (45%), Gaps = 27/324 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L + ++E ++ S P KA + ++ + G AI QI L+ E +V+TP
Sbjct: 502 GAIALIMTPTRELCTQIYSDLLPFAKALKLRAIAAYGGNAIKDQIAELKRGA-EIIVATP 560
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ + LV+D D + G +++ + +P T++F+
Sbjct: 561 GRMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFS--- 617
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + V +S I Q V + + +K ++ +++L Y
Sbjct: 618 --ATMPRIIDALTKKVLREPVEIQVGGRSVVAPEITQIVEIL-DEGKKFVRLLELLGELY 674
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
D + ++ L V + K +L+ + +GY SI G + +NS +D +K
Sbjct: 675 AD---DDDVRALIFVERQEKADDLLREVLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 728
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
MI + ++++ ++V+ D +++YV R +G +F T++
Sbjct: 729 VCPIMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 788
Query: 542 AHAGQMIEILEQCGQVVPDALRDL 565
A + + LEQ GQ VP+ L ++
Sbjct: 789 NCAPGIAKALEQSGQPVPEQLNEM 812
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 156/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG-----PIGVICAPTRELAHQIY 309
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L++ CE +++TP RL+ L+ +KA+ +
Sbjct: 310 LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE--VVIATPGRLIDLLKMKALKMFRA 367
Query: 332 SLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + + S++ Q G+ T++F+ + Y + +L I R+
Sbjct: 368 TYLVLDEADRMFDLGFEPQIRSIVGQIRPGR-QTLLFSATMPYKVERLAREILTDPI-RV 425
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V + I Q VNV SD EK+ ++ L D VL K ++
Sbjct: 426 TVGQ-VGGANEDIKQVVNVIPSDAEKMPWLLEKLPGMIDDG------DVLVFASKKARVD 478
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ L +G+ I+ DKD S E + Y
Sbjct: 479 EIERELNQRGFRIAALHG-----------------------DKDQASRMETLQKFKSGTY 515
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ +A
Sbjct: 516 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEAR 575
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG++++ L GQ VP+ L DL
Sbjct: 576 FAGELVQSLIAAGQDVPNELMDLA 599
>gi|363732011|ref|XP_426195.3| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Gallus
gallus]
Length = 653
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 162/389 (41%), Gaps = 44/389 (11%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARK 247
+R G ++ P+ +W I D++ +G+ T+ + A K
Sbjct: 265 IRKTGFQKPTPIQSQAWPIIL-----QGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPK 319
Query: 248 EKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEP 307
+K G GP +L L ++E A +V + C G ++ ++ G QI +
Sbjct: 320 DKRG----GPGMLVLAPTRELALQVEAECLKYTYKGFKSICIYGGGDRKAQINVVTKGV- 374
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPH------ 360
+ +++TP RL L I++ ++ LV+D D L G +++ I +P
Sbjct: 375 DIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMM 434
Query: 361 TVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQV 420
+ + D + + ++N ++ + L L + + Q V V +E+K
Sbjct: 435 SATWPDGVRRLAKSYLRNPMIVYVGTLDL-----AAVNTVEQKVIVINEEEKK------- 482
Query: 421 LDHAYGDHF--HSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIVSHIKNSV 475
A+ ++F +P K + VGK S ++ S L +G + + G
Sbjct: 483 ---AFMENFIDSMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDR---EQCDREQ 536
Query: 476 EADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILH 533
D K+ V ++ +++ L+ +++ V DF +++ YV + R +G
Sbjct: 537 ALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAV 596
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+ TK D A ++I+IL++ QVVPD L
Sbjct: 597 TLITKKDWKAASELIDILQRAKQVVPDEL 625
>gi|291222373|ref|XP_002731189.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 670
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 10/318 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V V K+ I ++ GA QI L E ++TP
Sbjct: 193 GPICLVLCPTRELAQQVAHVAVDFGKSSRIKNTCVYGGAPKGSQIRDLERGV-EICIATP 251
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RLL + ++ + LV+D D + IR+ I +P V T+
Sbjct: 252 GRLLDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 311
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K I++L+ ++ +
Sbjct: 312 VRGLAEDFLKDYLQVNIGALSLSANHNILQIVDVC-QEHEKDDKLIRLLEEIMQENEN-- 368
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K L V + +L ++ G+ ++ V ++ R A ++ D
Sbjct: 369 --KTLIFVETKKRTDDLTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRAGNAPILLATDV 426
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++ + + VI D+ S ++Y+ + AR +G ++FFT + A ++I++L
Sbjct: 427 ASRGLDVTDIKFVINFDYPSSTEDYIHRIGRTARSERTGTAYTFFTAGNMKQAPELIDVL 486
Query: 552 EQCGQVVPDALRDLCHTS 569
+ QV+ L ++ +
Sbjct: 487 REANQVINPKLINMAEAA 504
>gi|308493749|ref|XP_003109064.1| hypothetical protein CRE_11850 [Caenorhabditis remanei]
gi|308247621|gb|EFO91573.1| hypothetical protein CRE_11850 [Caenorhabditis remanei]
Length = 519
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 170/392 (43%), Gaps = 31/392 (7%)
Query: 185 AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAAD 242
AI + +G E+ +P+ W I C KD + S GS T+ +
Sbjct: 111 AIMAEIEKNGFEKPSPIQSQMWPILL--C---GKDCIGVSQTGSGKTLAFLLPAFLHIDA 165
Query: 243 SIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGL 302
+A+ EK PF+L L ++E A ++ + G +V L+ G + Q+
Sbjct: 166 QLAQYEKNEKK-PSPFVLVLSPTRELAQQIEGEVQKYSYNGYKSVCLYGGGSRSEQV--- 221
Query: 303 RSCEP--EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP 359
+SC+ E +++TP RL L + I ++ V+ +V+D D L G ++ R +P
Sbjct: 222 QSCKGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEAAIRRILFEIRP 281
Query: 360 HTVVFNDCLTYTSVP-AVQNLLLGSINR--LSLNQSVASQSA-CIIQSVNVCASDE--EK 413
+V LT + P V+NL + +++N S+ S + Q + E+
Sbjct: 282 DRLV---ALTSATWPEGVRNLTDRYTKQAIMAVNGSLDLTSCKSVTQHFEFIPHENRFER 338
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN 473
+ + + L++A+G+ + K++ V +L S KG + S G + S
Sbjct: 339 VCEIVNFLNNAHGNSY-----KMIIFVKSKVMADHLSSEFCMKGIN-SQGLHGGRSQSDR 392
Query: 474 SVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGI 531
+ + V ++ +++ ++ ++ V+ DF + ++ YV + R G
Sbjct: 393 ELSLKMLRTGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGE 452
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
SF +D ++ +I ILE+ GQ VP+ L+
Sbjct: 453 SMSFMWWNDRSNFDGLISILEKSGQEVPEQLK 484
>gi|90075746|dbj|BAE87553.1| unnamed protein product [Macaca fascicularis]
Length = 396
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 62 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 121 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 180
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 181 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 237
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSM 487
K + V + +L ++ G+ + CI K E D R A +
Sbjct: 238 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KGQPERDWVLNEFRSGKAPIL 290
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++YV + AR T G ++FFT + A +
Sbjct: 291 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 350
Query: 547 MIEILEQCGQVVPDALRDL 565
+I++LE+ Q + L L
Sbjct: 351 LIKVLEEANQAINPKLMQL 369
>gi|195453762|ref|XP_002073931.1| GK14378 [Drosophila willistoni]
gi|194170016|gb|EDW84917.1| GK14378 [Drosophila willistoni]
Length = 683
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 151/378 (39%), Gaps = 18/378 (4%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEK 249
++ G + +P+ +W I I +T + + ++ T S R ++
Sbjct: 277 IQKQGFSKPSPIQAQAWPILLQGL--DMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGQR 334
Query: 250 EGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEF 309
G + +L L ++E A ++ + V ++ G QI+ + E
Sbjct: 335 GGAN-----VLVLAPTRELALQIEMEVNKYSFRNMRAVCVYGGGCRKMQISDVERGA-EI 388
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDC 367
++ TP RL LV K IDVS ++ LV+D D + IR+ + P +
Sbjct: 389 IICTPGRLNDLVQAKVIDVSTITYLVLDEADRMLDMGFEPQIRKILLDIPPNRQTIMTSA 448
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
V + N + + + + + + + Q V D+EK + I+ G
Sbjct: 449 TWPPGVRRLANSYMTNPIEVCVGSLDLAATHSVKQIVQFLEDDKEK-YRTIKSFIKNMG- 506
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
E K++ G+ ++ +L S L G+ + + AD + +
Sbjct: 507 ----ESDKIIIFCGRKARADDLSSDLTLDGFMTQCIHGNRDQNDREQAIADIKSGVVHIL 562
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D S ++E+ VI DF +++ YV + R G SF T++D A +
Sbjct: 563 VATDVASRGLDIEDISHVINYDFPRNIEEYVHRVGRTGRAGRKGTSISFITREDWGMAHE 622
Query: 547 MIEILEQCGQ-VVPDALR 563
+I+ILE+ Q V+P+ ++
Sbjct: 623 LIKILEEADQEVLPELVK 640
>gi|309806776|ref|ZP_07700768.1| DEAD/DEAH box helicase [Lactobacillus iners LactinV 03V1-b]
gi|308166840|gb|EFO69027.1| DEAD/DEAH box helicase [Lactobacillus iners LactinV 03V1-b]
Length = 271
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K D LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLDLLSALGQNLSSDAQIVLF 173
>gi|403414729|emb|CCM01429.1| predicted protein [Fibroporia radiculosa]
Length = 463
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 25/314 (7%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPE-----FLVS 312
+L + ++E A + L + FGI +V++ G QI L++ + +V
Sbjct: 116 VLVVAPTRELALQTHDTLSALGEPFGIASVAVFGGVDKGPQIKALKNANNDGKTTRVIVG 175
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCL 368
TP R+L LV+ A D+ V+ LV+D D L +G D S+I + G + + D +
Sbjct: 176 TPGRILDLVNDGACDLGRVTYLVLDEADRMLDRGFENDIRSIIGFTKQGAELSATWPDSV 235
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNV---CASDEEKILKGIQVLDHAY 425
+ +N + R+++ + ++ + Q+V V S + ++L ++ L H
Sbjct: 236 RRLAASFQRNPV-----RVTVGSDDLTANSRVEQAVEVFDDARSKDSRLLNHLRALSHK- 289
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
E ++L V + + S L+ KGYS+ G + +S K
Sbjct: 290 -KSASPEDTRILVFVLYKKEASRVESMLRSKGYSVG-GLHGDMSQSARMDTLQNFKTGTT 347
Query: 486 SMIDKDHISTAELEEYEVVIVPD--FIISMKNYVEILTSMARHTVSGILHSFFTKD--DA 541
S++ ++ L+ VV V + F +++++Y+ + R SG +FFT D +
Sbjct: 348 SLLVATDVAARGLDIPNVVAVINYSFPLTIEDYIHRIGRTGRGGKSGKSITFFTGDNHER 407
Query: 542 AHAGQMIEILEQCG 555
A AG++ +L + G
Sbjct: 408 ALAGELARVLRESG 421
>gi|145348935|ref|XP_001418897.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579127|gb|ABO97190.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 396
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 136/324 (41%), Gaps = 26/324 (8%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGL--RSCEPEFLVST 313
P +L + ++E ++ VC LK A + V+++ GA+ + Q L + + ++ T
Sbjct: 73 PAVLVVAPTRELTLQISGVCNKLKKAVPVRAVAVYGGASQEEQEEALAQHTSQALLVIGT 132
Query: 314 PERLLKLVSLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKP---HTVVFNDC 367
P RLL ++ A+ + ++LV+D R+ +L + LS IR+++ K T++F+
Sbjct: 133 PGRLLAVLESGALQLDRCAMLVLDEADRMLALGFEEQLSTIREALPDKDSGRQTLLFSAT 192
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVAS----------QSACIIQSVNVCASDEE--KIL 415
+ L + ++ A+ A + Q+V+VCA ++ K++
Sbjct: 193 FPKAVRAIGKTWLRKGFETVKIDSEKATVPKDDDDVNVHMAIVEQTVHVCAEHKKSRKLM 252
Query: 416 KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSV 475
K I L G +VL + Q + K +ST + + ++
Sbjct: 253 KYITKLRAEDGRARS----RVLVFANRIKTVQFIADLCKRHNEKVSTLHGTMKQNRRDQA 308
Query: 476 EADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHS 534
D + +I D ++ E V+ DF S++ Y + R G S
Sbjct: 309 LKDFKAGKTPVLIATDVAGRGLDIAGLEYVVNWDFPGSIEQYRHRVGRAGRQGKKGAALS 368
Query: 535 FFTKDDAAHAGQMIEILEQCGQVV 558
FFT+ A ++++LE+ G V
Sbjct: 369 FFTRKFTPLASDLVKLLEKDGHFV 392
>gi|346311637|ref|ZP_08853640.1| hypothetical protein HMPREF9452_01509 [Collinsella tanakaei YIT
12063]
gi|345900700|gb|EGX70520.1| hypothetical protein HMPREF9452_01509 [Collinsella tanakaei YIT
12063]
Length = 679
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 216 SAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFT---GPFLLFLVSSQEKAAKV 272
+ +DIL + + T A+++ T + K G + + GP +L + ++E A ++
Sbjct: 68 AGRDIL-AAAQTGTGKTAAFLLPTMSRLPRVKRARGRAMSVGCGPRMLIITPTRELAQQI 126
Query: 273 RSVCKPLKAFGIHT-VSLHPGAAIDHQITGL-RSCEPEFLVSTPERLLKLVSLKAIDVSG 330
VCK + A HT V++ G + + Q + L R C+ LV+TP RL+ L+ A +
Sbjct: 127 DDVCKKVAARTRHTAVTVVGGVSYNPQKSALKRGCD--ILVATPGRLVDLIDQGACMLDE 184
Query: 331 VSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNLL 380
V +LV+D D + L +R+ +S P T++F+ L +V ++ +L+
Sbjct: 185 VQVLVLDEADRMLDMGFLPAVRKIVSYTPADRQTLLFSATLDEAAVGSITDLV 237
>gi|355563672|gb|EHH20234.1| hypothetical protein EGK_03044 [Macaca mulatta]
Length = 800
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 133/313 (42%), Gaps = 28/313 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V K + + ++ GA QI L E ++TP
Sbjct: 333 GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 391
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 392 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 451
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC + EK K IQ+++ + +
Sbjct: 452 VRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN-- 508
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ + CI G K S ++D
Sbjct: 509 --KTIIFVETKRRCDDLTRRMRRDGWP----AMCI----------HGDK----SQPERDW 548
Query: 493 ISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILE 552
+ ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++I++LE
Sbjct: 549 VLN-DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLE 607
Query: 553 QCGQVVPDALRDL 565
+ Q + L L
Sbjct: 608 EANQAINPKLMQL 620
>gi|390342961|ref|XP_784902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Strongylocentrotus purpuratus]
Length = 954
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 136/323 (42%), Gaps = 29/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CK K+ G+ V ++ G I QI L+ E +V TP
Sbjct: 565 GPITLIMTPTRELAMQIFKECKKFTKSMGLRAVCVYGGTGISEQIAELKRGA-EIIVCTP 623
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ + ++ + LV+D R+ + + I ++I TV+F+
Sbjct: 624 GRMIDMLGANNGRVTNLRRCTYLVLDEADRMFDMGFEPQVMKIVENIRPDRQTVLFSATF 683
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVA----SQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ +L I +SV +Q A I++ +++K LK +++L
Sbjct: 684 PRQMEALARKILTKPIEVQVGGRSVVCSDVTQHAMILE-------EDQKFLKLLELL--G 734
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
Y D +L V K L+ L Y I + ++S+ D K
Sbjct: 735 YYDEGQ-----ILVFVEKQESADLLLKDLMKASYPCLALHGGIDQYDRDSIIQD-FKAAN 788
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAA 542
V ++ ++ L+ +V+V ++ ++YV + R G ++F + A
Sbjct: 789 VKILVATSVAARGLDVKNLVLVINYDCPNHYEDYVHRVGRTGRAGNKGFSYTFLMPEQAK 848
Query: 543 HAGQMIEILEQCGQVVPDALRDL 565
+AG +I+ E G VP+ L ++
Sbjct: 849 YAGDVIKAFELSGAKVPEELTEM 871
>gi|444318435|ref|XP_004179875.1| hypothetical protein TBLA_0C05580 [Tetrapisispora blattae CBS 6284]
gi|387512916|emb|CCH60356.1| hypothetical protein TBLA_0C05580 [Tetrapisispora blattae CBS 6284]
Length = 540
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 133/313 (42%), Gaps = 14/313 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ C K+ I ++ G QI L S E +++TP
Sbjct: 186 GPIVLVLSPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPKGQQIRDL-SRGSEIVIATP 244
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSV 373
RL+ ++ + ++ V+ LV+D D + IR+ + +P T+
Sbjct: 245 GRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK- 303
Query: 374 PAVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
VQNL +N ++ + + S I Q V V +D EK + ++ L+ A D
Sbjct: 304 -EVQNLARDYLNDPIQVQIGSLELAASHTITQLVEVI-TDFEKRDRMVKHLEVASQD--- 358
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
+ K+L + L+ G+ ++ V A+ R+ + M+
Sbjct: 359 -KESKILVFASTKRTCDEITKYLREDGWPALAIHGDKDQRERDWVLAEFREGRSPIMVAT 417
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D + +++ VI D ++++YV + R +G SFFT+++ + +I
Sbjct: 418 DVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEENKSLGASLIS 477
Query: 550 ILEQCGQVVPDAL 562
I+ + Q +P L
Sbjct: 478 IMREAKQTIPPEL 490
>gi|20072320|gb|AAH26492.1| Ddx46 protein [Mus musculus]
Length = 626
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 151/365 (41%), Gaps = 35/365 (9%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +D++ +GS TI + + D + +E EG P + + ++E A ++
Sbjct: 2 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQIT 56
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVS 329
CK K G+ V ++ G I QI L+ E +V TP R++ ++ S + ++
Sbjct: 57 KECKKFSKTLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLR 115
Query: 330 GVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINR 386
V+ +V+D D + G ++R + +P TV+F+ + P L I
Sbjct: 116 RVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFS-----ATFPRAMEALARRILS 170
Query: 387 LSLNQSVASQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGK 442
+ V +S VC+ E++++ + + H+ E V+ V K
Sbjct: 171 KPIEVQVGGRSV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDK 222
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYE 502
L+ L Y + I + ++S+ D K ++ ++ L+
Sbjct: 223 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKH 281
Query: 503 VVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
+++V ++ ++YV R G ++F T+D A +AG +I+ LE G VP
Sbjct: 282 LILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPP 341
Query: 561 ALRDL 565
L L
Sbjct: 342 DLEKL 346
>gi|321456211|gb|EFX67324.1| hypothetical protein DAPPUDRAFT_302036 [Daphnia pulex]
Length = 797
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 156/364 (42%), Gaps = 33/364 (9%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T+ + + D A +E +G P + + ++E ++
Sbjct: 168 SGRDIIGIAKTGSGKTLAFLLPMFRHILDQPALEETDG-----PIAIIMSPTRELCLQIG 222
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVS 329
CK K+ + V+++ G I QI L+ E +V TP R++ +++ + ++
Sbjct: 223 KECKRFTKSLNLRVVTVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANNGRVTNLR 281
Query: 330 GVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINR 386
V+ +V+D D + G ++R + +P TV+F+ + P L I
Sbjct: 282 RVTYIVLDEADRMFDMGFEPQVMRIIDNTRPDRQTVMFS-----ATFPRQMEALARRILN 336
Query: 387 LSLNQSVASQS---ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD 443
+ +V +S A + Q V V DE+K LK +++L + E VL V K
Sbjct: 337 KPVEITVGGRSVVCADVEQHVLVM-EDEQKFLKLLELL------GVYQEQGSVLVFVEKQ 389
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV 503
+L+ L GY + I + ++S D K + ++ ++ L+ +
Sbjct: 390 ESADDLLKDLMKAGYDCISLHGGIDQYDRDSAVVD-FKNGKIKLMIATSVAARGLDVKHL 448
Query: 504 VIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
++V ++ ++Y+ R G ++F T D AG +I+ +EQ VP
Sbjct: 449 ILVVNYDCPNHHEDYIHRCGRTGRAGNKGFAYTFITPDQQRAAGDIIKAMEQSETPVPVE 508
Query: 562 LRDL 565
L+ L
Sbjct: 509 LQTL 512
>gi|340992734|gb|EGS23289.1| hypothetical protein CTHT_0009560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1198
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 149/325 (45%), Gaps = 30/325 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E ++ + P K + V+ + G AI QI L+ E +V+TP
Sbjct: 650 GPIGLILTPTRELCTQIYTDLLPFTKVLKLRAVAAYGGNAIKDQIAELKRGA-EIIVATP 708
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L+ S + ++ + +V+D D + G +++ + +P T++F+
Sbjct: 709 GRMIDLLAANSGRVTNLKRATYIVLDEADRMFDMGFEPQVMKIFANVRPDRQTILFS--- 765
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
++P + + L + R + +V +S I Q V V + +K ++ +++L Y
Sbjct: 766 --ATMPRIIDALTKKVLRNPVEITVGGRSVVAPEITQIVEVI-EENKKFVRLLELLGELY 822
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKR 482
+ + ++ L V + K +L+ L +GY SI G + +NS +D +K
Sbjct: 823 A---NDDDVRALIFVERQEKADDLLRELLRRGYGCMSIHGGKD---QEDRNSTISDFKKG 876
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I + ++++ ++V+ D +++YV R +G +F T++
Sbjct: 877 VCPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 936
Query: 542 AHAGQMIEILEQCGQVVP---DALR 563
A + + LEQ GQ VP DA+R
Sbjct: 937 NCASCIAKALEQSGQPVPERVDAMR 961
>gi|282158103|ref|NP_001164095.1| ATP-dependent RNA helicase p62 [Tribolium castaneum]
Length = 549
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 158/380 (41%), Gaps = 26/380 (6%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFS 253
D P + + G W S KD+ + +GS T+ I A + SIAR +
Sbjct: 134 DTPTAIQAQG---WPIAMSGKDLVGIAQTGSGKTLAYILPAIVHINNQPSIARGD----- 185
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
GP L L ++E A +++ V + + + GA Q L E ++
Sbjct: 186 --GPIALVLAPTRELAQQIQQVAHDFGSSSYVRNTCIFGGAPKGPQARDLERGV-EICIA 242
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLT 369
TP RL+ + ++ + LV+D D + IR+ I +P T++++
Sbjct: 243 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 302
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
Q+ L + ++++ S + I+Q V+VC E++ + L G++
Sbjct: 303 KEVRKLAQDFLRNYV-QINIGSLQLSANHNILQIVDVCQEHEKETK--LNNLLQEIGNN- 358
Query: 430 HSEP-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
EP K++ V K +++ T++ G+ ++ V + R + +I
Sbjct: 359 -GEPGAKIIIFVETKKKVESITRTIRRYGWPAVCMHGDKSQQERDFVLREFRNGKSSILI 417
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D + ++E + VI D+ S ++Y+ + R +G ++FFT + A +
Sbjct: 418 ATDVAARGLDVEGIKYVINYDYPNSSEDYIHRIGRTGRSDTTGTSYAFFTPSNFRQAKDL 477
Query: 548 IEILEQCGQVVPDALRDLCH 567
+ +L++ Q + L ++ +
Sbjct: 478 VSVLKEANQAINPRLSEMAN 497
>gi|25083096|gb|AAN72041.1| putative RNA helicase [Arabidopsis thaliana]
Length = 559
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 141/317 (44%), Gaps = 38/317 (11%)
Query: 266 QEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---S 322
Q+ + +R KPL GI V ++ G+ + QI+ L+ E +V TP R++ ++ S
Sbjct: 9 QQIHSDIRKFSKPL---GIRCVPVYGGSGVAQQISELKRGT-EIVVCTPGRMIDILCTSS 64
Query: 323 LKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL 379
K ++ V+ LV+D R+ + ++ I Q+I + TV+F+ + +
Sbjct: 65 GKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKV 124
Query: 380 LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYI 439
L + +SV ++ I Q V V + ++ L+ +++L SE K+L
Sbjct: 125 LNKPVEIQVGGRSVVNKD--ITQLVEV-RPESDRFLRLLELLGE------WSEKGKILVF 175
Query: 440 VGK----DSKFQNLVST----LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
V D+ +++++ + L G T +S KN V +++
Sbjct: 176 VQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDV---------CNLLIAT 226
Query: 492 HISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
++ L+ E E+V+ D ++YV + R G +F ++DDA +A +++
Sbjct: 227 SVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVK 286
Query: 550 ILEQCGQVVPDALRDLC 566
LE Q VPD L+ L
Sbjct: 287 DLELSEQPVPDDLKALA 303
>gi|320580417|gb|EFW94640.1| Putative ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 499
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 141/312 (45%), Gaps = 16/312 (5%)
Query: 259 LLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
+L + ++E A+++ L A G+ V ++ G + D Q ++ + +++TP RL
Sbjct: 162 VLIISPTRELASQIYDNLNELTAKVGLECVCVYGGVSKDDQRRAVKRSQ--CVIATPGRL 219
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
+ L+ +I + ++ LV+D D L KG + + + + +G T++F T T
Sbjct: 220 IDLIEDGSISLDKINYLVLDEADRMLEKGFEEDIKKVMKLTNGNRQTLMF----TATWPK 275
Query: 375 AVQNLLLGSINR---LSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V+ L + +++ +++ Q + IQ + EK K +Q+L
Sbjct: 276 EVRELAMNFMDKPVKVTIGQRDELSANKRIQQIVEVVDPREKEQKLLQLLRKYQSGSKKD 335
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
+ L + + K++ + TL KG+S++ + + D + ++ D
Sbjct: 336 DKLLIFALYKKEA--ARVEKTLTYKGFSVAALHGDLNQAQRTQALQDFKAGKHNILLATD 393
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ ++ +VVI F +++++YV + R +GI H+ FT+ + AG ++ +
Sbjct: 394 VAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGISHTLFTEHEKHLAGALMNV 453
Query: 551 LEQCGQVVPDAL 562
L Q VP+ L
Sbjct: 454 LRGADQPVPEEL 465
>gi|49072840|gb|AAT51707.1| DEAD box RNA helicase [Choristoneura fumiferana]
Length = 1012
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 137/323 (42%), Gaps = 28/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ + + K K+ G+ V ++ G I QI L+ E +V TP
Sbjct: 424 GPISLIMTPTRELCMQIGKDIRKFAKSLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTP 482
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLS----KGDTLSLIRQSISGKPHTVVFNDC 367
R++ ++ S + ++ VS +V+D D + + + +I +I TV+F+
Sbjct: 483 GRMIDMLAANSGRVTNLRRVSYIVLDEADRMFDMGFEPQVMKII-DNIRPDRQTVMFS-- 539
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHA 424
+ P L I + + V +S + Q V + D+ K K +++L
Sbjct: 540 ---ATFPRQMEALARRILQKPIEIQVGGRSVVCKDVEQHVAIL-EDDAKFFKLLELLG-- 593
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+S+ ++ V K +L+ L YS + I ++S D K
Sbjct: 594 ----LYSQLGSIIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDF-KNGK 648
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAA 542
V ++ ++ L+ ++V+V ++ ++YV R G +F T +
Sbjct: 649 VKLLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGR 708
Query: 543 HAGQMIEILEQCGQVVPDALRDL 565
+AG ++ +E G VVP LR L
Sbjct: 709 YAGDVLRAMELSGAVVPPTLRAL 731
>gi|342319919|gb|EGU11864.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Rhodotorula
glutinis ATCC 204091]
Length = 1534
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 142/343 (41%), Gaps = 59/343 (17%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP LKA G+ + G + I ++ E +V TP
Sbjct: 647 GPIAIIMTPTRELATQIYKECKPFLKALGLRASCAYGGMPLKDNIADMKRGS-EVIVCTP 705
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLS----KGDTLSLIRQSISGKPHTVVFNDC 367
R+++L+ S + I++ V+ LV+D D + + + +I Q I TV+F+
Sbjct: 706 GRMIELLTTNSGRLINLQRVTYLVLDEADRMFDMGFEPQVMKIIGQ-IRPDRQTVLFS-- 762
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSA---CIIQSVNVCASDEEKILKGIQVLDHA 424
+ P L + R L +V +S I Q V V D + + +++L
Sbjct: 763 ---ATFPRQMEALARKVLRRPLEITVGGRSVVADTITQIVEVRGEDT-RFNRMLELLGKL 818
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ D E + L V + L LK K Y+ C+ H GR++
Sbjct: 819 FNDE---EDARALIFVERQETADKLFVELKNKNYT------CMPLH-------GGREQ-- 860
Query: 485 VSMIDKDH-------------ISTA------ELEEYEVVIVPDFIISMKNYVEILTSMAR 525
+D+D I+T+ ++++ ++VI D M++YV R
Sbjct: 861 ---VDRDQTIVDFKNGSCPIVIATSVAARGLDVKQLKLVIQYDPPNHMEDYVHRAGRTGR 917
Query: 526 HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
+G +F T + ++ +++ L+ VP L ++ +
Sbjct: 918 AGNTGTCVTFITPEQERYSLDILKALQASNAPVPPELEEMAKS 960
>gi|358056965|dbj|GAA97124.1| hypothetical protein E5Q_03800 [Mixia osmundae IAM 14324]
Length = 559
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 13/312 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A + + C A I ++ GA QI L+ E +++TP
Sbjct: 189 GPIVLILSPTRELAVQTAAECTRFGASSKIRNTCVYGGAPKGGQIRDLQRGA-EIVIATP 247
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ I T++F+
Sbjct: 248 GRLIDMLESGKTNLLRVTYLVMDEADRMLDMGFEPQIRKIVDQIRPDRQTLMFSATWP-K 306
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
V + + L ++++ S + I+Q V VC SD EK K I+ L+ +
Sbjct: 307 EVQKLASEYLRDFAQVNVGSLELSANVNILQIVEVC-SDYEKRGKLIKHLEK-----ISA 360
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
E KVL +G +L L+ G+ ++ V A+ + + MI D
Sbjct: 361 ENAKVLIFIGTKRVADDLTKYLRQDGWPALAIHGDKQQQERDWVLAEFKSGRSPIMIATD 420
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++++ VI D +++Y+ + R G +S+FT + + A + +I
Sbjct: 421 VASRGLDVKDISYVINYDMPNQIEDYIHRIGRTGRAGRKGTAYSYFTPEQSKLARDLAKI 480
Query: 551 LEQCGQVVPDAL 562
L Q VP L
Sbjct: 481 LADAKQNVPPEL 492
>gi|413950350|gb|AFW82999.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 778
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 38/328 (11%)
Query: 256 GPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A ++ K ++ I L+ GA Q+ L R + +V+T
Sbjct: 217 GPTVLVLAPTRELATQILDEAMKFGRSSRISCTCLYGGAPKGPQLRDLDRGVD--VVVAT 274
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPH---TVVFNDCLTY 370
P RL ++ ++ + + VS LV+D D + IR+ + PH T+++
Sbjct: 275 PGRLNDILEMRRVSLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPHRRQTLMYTATWPK 334
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE-----EKILKGIQVLDHAY 425
+LL+ + N ++ I Q + V E E+IL+ QV
Sbjct: 335 EVRRIADDLLVHPLQVTIGNVDELVANSAITQHIEVITPSEKQRRLEQILRS-QVSGS-- 391
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCK-GYSISTGSNC------IVSHIKNSVEAD 478
K+L L TL + G S G +++H ++
Sbjct: 392 ---------KILIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLNHFRSG---- 438
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+ P + D ++++ VVI DF +++YV + R +G+ ++FF
Sbjct: 439 --RSPILVATDV-AARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCD 495
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
D+ +A +I+ILE Q VP L D+
Sbjct: 496 QDSKYAADLIKILEGANQQVPRDLEDMA 523
>gi|345566862|gb|EGX49802.1| hypothetical protein AOL_s00076g686 [Arthrobotrys oligospora ATCC
24927]
Length = 1086
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 142/331 (42%), Gaps = 29/331 (8%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
+ GP L + ++E A ++ KP LKA + V + G+ I QI L+ EF+V
Sbjct: 517 NLEGPIALVMTPTRELATQIFKESKPFLKALNLRGVCAYGGSPIKDQIAELKRGA-EFIV 575
Query: 312 STPERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFN 365
TP R++ L+ S + ++ V+ +V+D D + G ++R + +P TV+F+
Sbjct: 576 CTPGRMIDLLAANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMRIIGNIRPDRQTVLFS 635
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ +L+ + + +SV + I V ++ K + +++L Y
Sbjct: 636 ATFPSQMEALARKVLIKPVEIVVGARSVVAAEVSQIVEVR---TETTKFARLLEILGELY 692
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCI-----VSHIKNSVEA 477
+ + L V + +L+S L +GY S+ G + I +S K V
Sbjct: 693 DKEDDA---RSLVFVDRQESADSLLSDLMKRGYATMSLHGGKDQIDRDSTISDFKAGVSQ 749
Query: 478 DGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
V + ++++ ++V+ D M++YV + R G +F T
Sbjct: 750 -------VLVATSVAARGLDVKQLKLVVNYDCPNHMEDYVHRVGRTGRAGNKGTAVTFIT 802
Query: 538 KDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
D +A + + L+ GQ VP+ ++ L +
Sbjct: 803 PDQERYAHDIAKALKLSGQDVPEEVQKLVSS 833
>gi|326803010|ref|YP_004320828.1| DEAD/DEAH box helicase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650403|gb|AEA00586.1| DEAD/DEAH box helicase [Aerococcus urinae ACS-120-V-Col10a]
Length = 437
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
G L+ L SQE A+++ SV +P ++ + + GA I QI L++ +PE +V++
Sbjct: 72 AGLQLIILAPSQELASQIASVARPWAQSLDLKLQLVIGGANIKRQIDQLKA-KPEIVVAS 130
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTY 370
R+ +L+ + + V V+ L+ D +D L K D+L L I P + F +T
Sbjct: 131 LGRINELIEQRKLKVHQVNYLICDEVDDLLKADSLPLFTDLIKRLPKQRQNIAFGATITQ 190
Query: 371 TSVPAVQNLLLGSINR-LSLNQSVASQS 397
S+ V+ LL +I++ + L Q ++SQ+
Sbjct: 191 DSLTKVKELL--AIDQVIDLRQDLSSQA 216
>gi|410959565|ref|XP_003986376.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Felis catus]
Length = 647
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 17/313 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L+ ++E A +V+ C G+ +V ++ G + QI L+ + +++TP
Sbjct: 315 GPGMLVLIPTRELALQVQVECSKYSYKGLKSVCIYGGGDRNGQIQELKKGV-DIIIATPG 373
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L +D+ ++ LV+D D L G +++ + +P +T + P
Sbjct: 374 RLNDLQMNNFVDLRSITYLVLDEADKMLDMGFEPQIMKILLDVRPDR---QTIMTSATWP 430
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSE 432
L S + + V + + +V N+ + EE+ IQ S
Sbjct: 431 YAVRRLAQSYLKEPMIVYVGTLDLIAVSTVKQNIIVTTEEEKRSHIQTFLENM-----SP 485
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
KV+ V + + +L S L + S+ S N + ++E K + ++
Sbjct: 486 KDKVIVFVSRKAVADHLSSDLILQHISVESLHGNREQKDREKALE--NFKTGKIRILIAT 543
Query: 492 HISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
+ + L+ +++ V DF +++ YV + R +G+ + T++D AG++I
Sbjct: 544 DLGSRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGKTGMSITLITRNDWRIAGELIN 603
Query: 550 ILEQCGQVVPDAL 562
ILE+ Q VPD L
Sbjct: 604 ILERTHQNVPDEL 616
>gi|403350942|gb|EJY74950.1| RNA helicase, putative [Oxytricha trifallax]
Length = 644
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 162/404 (40%), Gaps = 38/404 (9%)
Query: 177 KFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKD---ILETSGSSSTIVQI 233
K+++ L EN ++ P + S G W S +D I ET + +
Sbjct: 73 KYIMETLQQQENFVK--------PSAIQSQG---WPVALSGRDMVGIAETGSGKTLSFLL 121
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPG 292
IV A + S GP +L + ++E ++ C+ + I +++ G
Sbjct: 122 PGIVHVNAQEMLE------SGDGPIVLVMAPTRELVMQIEQQCRKFAQPCKISCLAIFGG 175
Query: 293 AAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR 352
D Q L S E L++TP RLL + + ++ V+ LV+D D + I+
Sbjct: 176 VPRDGQQQKL-SRGVEILIATPGRLLDFMESGVVKLNRVTYLVLDEADRMLDMGFEKHIK 234
Query: 353 QSISG-KPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSAC----IIQSVNVC 407
+ + +P T+ V+ L N L ++ + + I Q ++VC
Sbjct: 235 KILGNVRPDRQTLMWSATWPK--EVEELARSYCNVLPVHIQIGNPGLTANLRIKQVIDVC 292
Query: 408 ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI 467
+E+K + + + ++ KV+ +L ++ G+ G +
Sbjct: 293 -EEEDKYYRFMNFMKKM------NDGSKVIVFCETKRGVDDLSRKMRTDGWHAVKGIHGD 345
Query: 468 VSHI-KNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMAR 525
S ++S D + +I D S ++++ + V+ D ++YV + AR
Sbjct: 346 KSQAERDSTYKDFKDGTCYILIATDVASRGLDVKDIKYVVNYDMPKQCEDYVHRIGRTAR 405
Query: 526 HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
SG ++ FTK++ AG ++++L+ GQ +P L D +
Sbjct: 406 AGASGSAYALFTKNNMMIAGDLVKLLKLSGQEIPSQLYDYAEMA 449
>gi|356573317|ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
46-like [Glycine max]
Length = 741
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 24/272 (8%)
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPH---TVVF 364
+ +V+TP RL ++ ++ I ++ VS LV+D D + IR+ ++ P+ T++F
Sbjct: 292 DIVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMF 351
Query: 365 NDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLD 422
+LL+ + N ++++ VA++S I Q V V E++ + L+
Sbjct: 352 TATWPKEVRKIAADLLVKPVQVNIGNVDELVANKS--ITQHVEVLPPMEKQ-----RRLE 404
Query: 423 HAYGDHFHSEPLKVLYIVGK--DSKFQNLVSTLKCK---GYSISTGSNCIVSHIKNSVEA 477
H + + K D +NL G + ++S +
Sbjct: 405 HILRSQDQGSKIIIFCSTKKMCDQLARNLTRHFGAAAIHGDKSQAERDHVLSQFRTG--- 461
Query: 478 DGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
+ P + D ++++ VV+ DF +++YV + R +G+ ++FF
Sbjct: 462 ---RSPVLVATDV-AARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFG 517
Query: 538 KDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
DA +A +I++LE Q VP LRD+ S
Sbjct: 518 DQDAKYASDLIKVLEGANQKVPPELRDMSSRS 549
>gi|242021756|ref|XP_002431309.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212516577|gb|EEB18571.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 675
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 136/321 (42%), Gaps = 22/321 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ V C + + + GA Q L S E ++TP
Sbjct: 195 GPIVLVLAPTRELAQQIQQVACDFGTSSAVRNTCIFGGAPKMLQARDLESGV-EICIATP 253
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 254 GRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 313
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC S+ EK K +++L+ +E
Sbjct: 314 VRRLAEEFLNDYVQINIGSLQLSANHNILQIVDVC-SEYEKQTKLLKLLNE-----IANE 367
Query: 433 P-LKVLYIVGKDSKFQNLVSTLKCKGYSI----STGSNCIVSHIKNSVEADGRKRPAVSM 487
P K + V K + + GY S ++ N GR V++
Sbjct: 368 PETKTMIFVETKKKVDEIARAVTRYGYQALAIHGDKSQSDRDYVLNQFRC-GR----VNI 422
Query: 488 IDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG 545
+ ++ L+ + + VI D+ + ++YV + RH +G ++FFT + AG
Sbjct: 423 LVATDVAARGLDVDDVKFVINFDYPNNSEDYVHRIGRTGRHDKTGTAYTFFTPSNVNKAG 482
Query: 546 QMIEILEQCGQVVPDALRDLC 566
++ +L++ QVV L +L
Sbjct: 483 DLVAVLQEANQVVNPKLYELV 503
>gi|321459437|gb|EFX70490.1| hypothetical protein DAPPUDRAFT_61214 [Daphnia pulex]
Length = 509
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 146/352 (41%), Gaps = 28/352 (7%)
Query: 220 ILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKV-RSVCK- 277
I +T + + ++ I+R E+ +GP +L + ++E A ++ R V K
Sbjct: 105 IAQTGTGKTLAFLLPAMIHIEGQPISRAER-----SGPSVLIMAPTRELAQQIEREVAKF 159
Query: 278 PLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVD 337
P K GI + ++ G QI G + E +V+TP RL L+ A+ S VS +V+D
Sbjct: 160 PWK--GIKCLCVYGGGDRRQQI-GAVAKGVEIVVATPGRLYDLMQAGALKTSSVSYVVLD 216
Query: 338 RLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVAS 395
D L G + + I +P + T+ + + N + N L +
Sbjct: 217 EADRMLDLGFEPQIKKILIDVRPDRQIIMTSATWPEGIRRIANEYMD--NPLQVCVGTLD 274
Query: 396 QSAC--IIQSVNVCASDEEK--ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+AC + Q V + +E++ ++ I+ LD K + VG+ + S
Sbjct: 275 LAACHSVTQHVEILDEEEKRPRLIDFIRALDPND---------KAIVFVGRKLVADQVAS 325
Query: 452 TLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFI 510
L G S + AD R +I D S ++++ ++ DF
Sbjct: 326 ELSLIGISCQCIHGDREQIDREQALADLRSGDVKLLIATDVASRGIDIKDITHILNYDFP 385
Query: 511 ISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+ YV + R +GI SF T++D + A +I+IL++ Q +P L
Sbjct: 386 RHAEEYVHRIGRTGRAGRTGIAISFMTREDWSKASDLIDILKEANQEIPPEL 437
>gi|254572992|ref|XP_002493605.1| Essential ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|238033404|emb|CAY71426.1| Essential ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|328354565|emb|CCA40962.1| ATP-dependent RNA helicase DDX5/DBP2 [Komagataella pastoris CBS
7435]
Length = 537
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 132/318 (41%), Gaps = 16/318 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG I ++ G QI L E ++
Sbjct: 173 GPVALVLAPTRELAVQIQKECS---KFGSSSRIRNTCVYGGVPKGQQIRDLARGA-EIVI 228
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ ++ ++ V+ LV+D D + IR+ + +P T+
Sbjct: 229 ATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 288
Query: 371 T-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
SV A+ L ++++ + S I Q + V S+ EK + + L+ A D
Sbjct: 289 PKSVQALARDYLHDYIQVNVGSLELAASHNIKQVIEVL-SEYEKRDRLTKYLEQASEDKT 347
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
K+L L + L+ G+ ++ V + R + M+
Sbjct: 348 S----KILVFASTKRTCDELTTYLRSDGWPALAIHGDKEQRERDWVLQEFRSGKSPIMVA 403
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + +++ V+ D ++++YV + R +G SFFT +A A ++
Sbjct: 404 TDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAVSFFTNANARMADDLV 463
Query: 549 EILEQCGQVVPDALRDLC 566
IL++ Q++P+ L+ +C
Sbjct: 464 PILKEANQIIPEDLQAMC 481
>gi|339233462|ref|XP_003381848.1| ATP-dependent RNA helicase Dbp2 [Trichinella spiralis]
gi|316979290|gb|EFV62098.1| ATP-dependent RNA helicase Dbp2 [Trichinella spiralis]
Length = 540
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 142/317 (44%), Gaps = 16/317 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +V+ V + G+ +V ++ GA+ Q L E ++TP
Sbjct: 170 GPIVLVLAPTRELAQQVQEVAIEYGSRNGVRSVCVYGGASKGPQQRELERGV-EVCIATP 228
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI-SGKP--HTVVFNDCLTYT 371
RLL + + ++ + LV+D D + IRQ + +P T++F+ T
Sbjct: 229 GRLLDFLRMGVTNLRRCTFLVLDEADRMLDMGFEPQIRQIVDQTRPDRQTIMFSATWP-T 287
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE--EKILKGIQVLDHAYGDHF 429
V A+ L +++ + + I Q V + + E E++LK +Q +
Sbjct: 288 EVRALAESFLRDYVFVNIGSLQLAANHNIEQVVEIVSEFEKHERLLKLLQEVTK------ 341
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
S+P KVL V K L L+ KG+ + + ++ V + R + +I
Sbjct: 342 DSDP-KVLIFVETKRKADELTRWLRQKGWPVLSIHGDKAQGERDWVLNEFRTGKSPIVIA 400
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + ++++ + V+ D+ ++YV + R +G ++FF ++A +A +I
Sbjct: 401 TDVAARGLDVDDIKFVVNYDYPQCSEDYVHRIGRTGRCNRTGTAYTFFNANNARYAKDLI 460
Query: 549 EILEQCGQVVPDALRDL 565
++L + Q V L +L
Sbjct: 461 DVLIEAKQHVNPKLYEL 477
>gi|255534879|ref|YP_003095250.1| Cold-shock DEAD-box protein A [Flavobacteriaceae bacterium 3519-10]
gi|255341075|gb|ACU07188.1| Cold-shock DEAD-box protein A [Flavobacteriaceae bacterium 3519-10]
Length = 571
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-L 342
I T +++ G++I QI LR +P+ +V TP R++ L++ KA+D S + LV+D D L
Sbjct: 101 IKTTAVYGGSSITDQIRSLRD-KPQIIVGTPGRVIDLINRKALDFSEIQWLVLDEADEML 159
Query: 343 SKG--DTLSLIRQSISGKPHTVVFNDCL---------TYTSVPAVQNLLLGSINRLSLN 390
S G D L I + HT +F+ + +Y + P + +GSIN + N
Sbjct: 160 SMGFKDDLETILRETPETKHTYLFSATMNKEVERISKSYLTAP--HRISVGSINEVKKN 216
>gi|242059637|ref|XP_002458964.1| hypothetical protein SORBIDRAFT_03g043450 [Sorghum bicolor]
gi|241930939|gb|EES04084.1| hypothetical protein SORBIDRAFT_03g043450 [Sorghum bicolor]
Length = 578
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 133/314 (42%), Gaps = 12/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ ++ + ++ GA QI LR E +++TP
Sbjct: 232 GPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGV-EIVIATP 290
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ ++ ++ V+ LV+D D + IR+ ++ +P T+
Sbjct: 291 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPRE 350
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V A+ L + ++++ + I Q V V SD EK + L D
Sbjct: 351 VEALARQFLQNPYKVTIGSPELKANHSIQQIVEVI-SDHEKYPR----LSKLLSDLMDGS 405
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
+ + + KD + L+ G+ + ++ V A+ + + M D
Sbjct: 406 RILIFFQTKKDC--DKITRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDV 463
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ ++++ + VI DF ++++Y+ + R SG +FFT +A + +++IL
Sbjct: 464 AARGLDVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTHANAKFSRNLVKIL 523
Query: 552 EQCGQVVPDALRDL 565
+ GQ V AL +
Sbjct: 524 REAGQAVNPALESM 537
>gi|350399327|ref|XP_003485490.1| PREDICTED: ATP-dependent RNA helicase p62-like [Bombus impatiens]
Length = 519
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 25/322 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V FG + + + GA Q L E ++TP
Sbjct: 173 GPIALVLAPTRELAQQIQKVTY---NFGYVRSTCIFGGAPKGSQARDLEQGV-EICIATP 228
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSV 373
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 229 GRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPK- 287
Query: 374 PAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
V+NL L +L++ S + I+Q V+VC + EK K +L +
Sbjct: 288 -EVRNLAEEYLVDYTQLNIGSLTLSANHNILQIVDVC-EEHEKQAKLQDLLQEI--SNVS 343
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD------GRKRPA 484
E K + V K +++ T++ G+ + CI K+ +E D R + +
Sbjct: 344 PEGGKTIIFVETKKKVESITKTIRRSGWP----AVCIHGD-KSQLERDFVLTEFRRNKDS 398
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+ + ++++ + VI D+ S ++Y+ + R SG ++FFT ++ A
Sbjct: 399 ILVATDVAARGLDVDDVKYVINFDYPTSSEDYIHRIGRTGRSNNSGTSYAFFTPQNSRQA 458
Query: 545 GQMIEILEQCGQVVPDALRDLC 566
+I +L++ QV+ L +L
Sbjct: 459 KGLINVLKEAKQVINPKLMELA 480
>gi|50312211|ref|XP_456137.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660243|sp|Q6CIV2.1|DBP2_KLULA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49645273|emb|CAG98845.1| KLLA0F23716p [Kluyveromyces lactis]
Length = 554
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 10/312 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ C A I ++ G QI L+ E L++TP
Sbjct: 186 GPIVLVLAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGV-EILIATP 244
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ ++ + ++ V+ LV+D D + IR+ + +P T+
Sbjct: 245 GRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 304
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + + L ++ + S S I Q V V +D EK + + L+ A D +
Sbjct: 305 VKQLASDYLHDPIQVQIGSLELSASHTITQIVEVL-TDFEKRDRLAKHLETASQD----Q 359
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K++ + S L+ +G+ + ++ V A+ R + M+ D
Sbjct: 360 DSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDV 419
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
+ +++ VI D ++++YV + R +G SFFT+ + + +I+I+
Sbjct: 420 AARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIKIM 479
Query: 552 EQCGQVVPDALR 563
+ Q +P+ LR
Sbjct: 480 REAKQDIPEELR 491
>gi|226952982|ref|ZP_03823446.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter sp. ATCC
27244]
gi|294650564|ref|ZP_06727921.1| ATP-dependent RNA helicase RhlB [Acinetobacter haemolyticus ATCC
19194]
gi|226836303|gb|EEH68686.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter sp. ATCC
27244]
gi|292823561|gb|EFF82407.1| ATP-dependent RNA helicase RhlB [Acinetobacter haemolyticus ATCC
19194]
Length = 383
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 132/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKMLDRNFVDIIV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDRIEFLVIDEADRLLDMGFIPSVKRIVRYSPSKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ K+L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVTVEIEPEQKT---NVDVEQRVYVVAKEDKYKLLQDI------ 245
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 ----LRDEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQGK 301
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 302 HNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA 360
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 361 FY---LPEIEKAIGKKLP 375
>gi|193641205|ref|XP_001950880.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Acyrthosiphon pisum]
Length = 569
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 160/371 (43%), Gaps = 34/371 (9%)
Query: 211 WKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAA 270
W S D++ + + T +A+I+ A + ++ GP +L L ++E
Sbjct: 216 WPIIMSGHDLIAIA-QTGTGKTLAYILP-ALIHLLQQPTPRIKRIGPSVLILGPTRELVL 273
Query: 271 KVRSVCKPLKAFGIHTVSLHPG--AAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
++ I V ++ G +A+ HQ +++ +P+ +V+TP RL LV ++AI +
Sbjct: 274 QIHDEITKYLHNNIKVVCVYGGGVSALTHQ-ELIQAEKPDIIVATPGRLNDLVGIQAIKL 332
Query: 329 SGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP-AVQNLLLGSI 384
VS +V+ DR+ + + + L + I T+ LT + P AVQN L
Sbjct: 333 DHVSYMVLDEADRMLDMGFKNQIELSLRHIRPDKQTI-----LTSATWPTAVQN-LANYF 386
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPL----KVLYIV 440
+ L+ ++ S + +V +KI+ + + D+F S L KV+ +
Sbjct: 387 AKNPLHITIGSLDLSTVDTVT------QKIIILKEHQKEGWLDNFISNDLSKNDKVIIFM 440
Query: 441 GKDSKFQNLVSTLKCKGYSISTGSNCI----VSHIKNSVEADGRKRPAVSMIDKDHISTA 496
K + + K + G CI + + + AD R +I D S
Sbjct: 441 RKKTSVDKMYENFNSK----NIGCRCIHGGRLQADREASLADIRNGVVSILIATDVASRG 496
Query: 497 -ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCG 555
++ + +VI DF ++++ YV + R +G + F+K D +A +I +LE+
Sbjct: 497 IDIHDISLVINYDFPLNIEEYVHRVGRTGRAGKTGSAITLFSKYDKFNASALIGVLEKSK 556
Query: 556 QVVPDALRDLC 566
Q +P L +
Sbjct: 557 QPIPPELYTMT 567
>gi|269104500|ref|ZP_06157196.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161140|gb|EEZ39637.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 430
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 217 AKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRS 274
KDIL +S GS T+ + A + R + F+ P +L L ++E A +V +
Sbjct: 20 GKDILASSKTGSGKTLA----FLLPAMQRMYRSKP--FTRRDPRVLILTPTRELAKQVFA 73
Query: 275 VCKPLKAFGIHTVSLHPGAA-IDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSL 333
KPL A + +L G + Q+ LR +P F+V+TP RL + ++ + G+ +
Sbjct: 74 QLKPLNAGTPYDAALIVGGENFNDQVKALRK-DPMFVVATPGRLADHLEHRSTYLDGLEM 132
Query: 334 LVV---DRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSVPAVQNLLLGSINRLSL 389
L++ DR+ L L I ++ S + T++F+ L + V + + +L + R+S+
Sbjct: 133 LILDEADRMLDLGFEKELRRIHEAASHRRRQTLMFSATLDHPEVVEMAHEMLNAPKRISI 192
Query: 390 NQSVASQSACIIQSVNVC 407
S A + I Q +C
Sbjct: 193 GHS-AEEHKDITQRFILC 209
>gi|256957102|ref|ZP_05561273.1| helicase [Enterococcus faecalis DS5]
gi|257077898|ref|ZP_05572259.1| helicase [Enterococcus faecalis JH1]
gi|294779263|ref|ZP_06744667.1| DEAD/DEAH box helicase [Enterococcus faecalis PC1.1]
gi|307268089|ref|ZP_07549477.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4248]
gi|384518115|ref|YP_005705420.1| DEAD/DEAH box helicase [Enterococcus faecalis 62]
gi|397699402|ref|YP_006537190.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis D32]
gi|422694616|ref|ZP_16752607.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4244]
gi|422711811|ref|ZP_16768738.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0027]
gi|422721033|ref|ZP_16777638.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0017]
gi|422868620|ref|ZP_16915158.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1467]
gi|256947598|gb|EEU64230.1| helicase [Enterococcus faecalis DS5]
gi|256985928|gb|EEU73230.1| helicase [Enterococcus faecalis JH1]
gi|294453630|gb|EFG22028.1| DEAD/DEAH box helicase [Enterococcus faecalis PC1.1]
gi|306515730|gb|EFM84257.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4248]
gi|315031705|gb|EFT43637.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0017]
gi|315034238|gb|EFT46170.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0027]
gi|315147960|gb|EFT91976.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4244]
gi|323480248|gb|ADX79687.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis 62]
gi|329574334|gb|EGG55906.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1467]
gi|397336041|gb|AFO43713.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis D32]
Length = 433
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + V +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLVKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|384512706|ref|YP_005707799.1| DEAD/DEAH box helicase [Enterococcus faecalis OG1RF]
gi|430361452|ref|ZP_19426672.1| helicase [Enterococcus faecalis OG1X]
gi|430368044|ref|ZP_19428026.1| helicase [Enterococcus faecalis M7]
gi|327534595|gb|AEA93429.1| DEAD/DEAH box family ATP-dependent RNA helicase [Enterococcus
faecalis OG1RF]
gi|429512473|gb|ELA02079.1| helicase [Enterococcus faecalis OG1X]
gi|429516549|gb|ELA06039.1| helicase [Enterococcus faecalis M7]
Length = 433
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + V +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLVKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|340057268|emb|CCC51612.1| putative DEAD box RNA helicase [Trypanosoma vivax Y486]
Length = 579
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 24/326 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP ++ L ++E A ++ + + + ++ GA Q+ L+ LV+TP
Sbjct: 185 GPMVVVLAPTRELAQQIEQETRKVILNNVQCGCIYGGAPKGPQLKMLQRGV-HILVATPG 243
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYTS 372
RL+ + +K +++ V+ LV+D D + +R + TV+F+ +
Sbjct: 244 RLIDFLGIKRVNLLRVTYLVLDEADRMLDMGFEPQVRTICSQVRPDRQTVMFS-----AT 298
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEKILKGIQVLDHAYGDHF 429
P L R + +V S + V + + K+ + +++D +
Sbjct: 299 WPKEIQRLAAEFQRDWIRINVGSTELLANKDVTQHFILTQESTKLEELRKLMDKHRNE-- 356
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
+VL NL LK GY H ++ + + RK P + ++
Sbjct: 357 -----RVLVFCKMKRTADNLEWQLKRWGYDAMAIHGDKEQHQRDFILSRFRKDPQLCLVA 411
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG--- 545
D + +++E E VI DF + + +YV + R G + TK + +
Sbjct: 412 TDVAARGLDIKELETVINYDFPMQIDDYVHRVGRTGRAGAKGEAFTLITKREQQISPSVL 471
Query: 546 -QMIEILEQCGQVVPDALRDLCHTSP 570
++I ILE+ Q VP+ +R+ P
Sbjct: 472 KELIAILERAQQQVPEWMREWYMHQP 497
>gi|257086368|ref|ZP_05580729.1| helicase [Enterococcus faecalis D6]
gi|422722962|ref|ZP_16779511.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2137]
gi|256994398|gb|EEU81700.1| helicase [Enterococcus faecalis D6]
gi|315026985|gb|EFT38917.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2137]
Length = 433
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + V +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLVKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|70989821|ref|XP_749760.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74668891|sp|Q4WH83.1|DBP3_ASPFU RecName: Full=ATP-dependent RNA helicase dbp3
gi|66847391|gb|EAL87722.1| ATP-dependent RNA helicase, putative [Aspergillus fumigatus Af293]
gi|159129169|gb|EDP54283.1| ATP-dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 503
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 34/304 (11%)
Query: 279 LKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLL 334
L FG I ++ G D Q L++ +V+TP RL L ++D+ V L
Sbjct: 179 LSKFGASVDIRVTCIYGGVKKDEQREALKTAA--IVVATPGRLKDLKDDGSVDLGKVKYL 236
Query: 335 VVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNL---LLGSINRL 387
V+D D L KG D +IR + TV+F T T P+V++L + S +
Sbjct: 237 VLDEADRMLDKGFEQDIKDIIRSTPDSTRQTVMF----TATWPPSVRDLAASFMTSAVTV 292
Query: 388 SL--NQSVASQSACIIQSVNVCASDEEKILKGIQVLDH-----AYGDHFHSEPLKVLYIV 440
++ + S ++ I+ V +EK + +Q+L A GD KVL
Sbjct: 293 TIGGDPSADPRANTRIKQVVEVVKPQEKEARLVQLLSRSQRGAAVGD-------KVLVFC 345
Query: 441 GKDSKFQNLVSTLKCKGYSISTGSNCIVSHIK-NSVEADGRKRPAVSMIDKDHISTA-EL 498
+ + L+ K + ++ + H + S+EA + A ++ D + ++
Sbjct: 346 LYKKEAVRVERLLRSKNFKVAGIHGDLNQHERFKSLEA-FKTGSATVLVATDVAARGLDI 404
Query: 499 EEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
++VI F +++++YV + R G + FT+ D A +G +I +L Q V
Sbjct: 405 PSVKLVINVTFPLTVEDYVHRIGRTGRAGADGHAITLFTEADKAQSGALINVLRAAKQDV 464
Query: 559 PDAL 562
PDAL
Sbjct: 465 PDAL 468
>gi|167919550|ref|ZP_02506641.1| ATP-dependent RNA helicase [Burkholderia pseudomallei BCC215]
Length = 390
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 12 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 67
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 68 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 127
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 128 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 180
>gi|320170440|gb|EFW47339.1| DEAD box RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 20/320 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVC--------KPLKAFGIHTVSLHPGAAIDHQITGLRSCEP 307
GP +L L ++E A + V K + + TV + G Q+ L+S
Sbjct: 311 GPVVLVLCPTRELAMQTAEVYANVASHTGKSSSSVALKTVCIFGGVPKKQQLDQLKSGI- 369
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVF 364
+V+TP RL + I + VS +++D D L + I ++ T++F
Sbjct: 370 HVIVATPGRLRDFIDSGDISLQRVSCVILDEADRMLDLGFEKDIRDILGRVTKDRQTLMF 429
Query: 365 NDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ + L R+++ + + Q V V E K ++LD
Sbjct: 430 SATWPSAIEAIGREFLAPDTVRVTIGGDELVANDAVTQHVEVL----EPFAKDARLLD-L 484
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
H S KV+ V + + L KG+ S + S + K
Sbjct: 485 LQKHHSSRKNKVIIFVLYKQEAPRVEQMLLRKGWK-SIAIHGDRSQADRTAALQAFKTGE 543
Query: 485 VSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
V ++ ++ L+ E VI F +++++YV + R +G +FFT +D +
Sbjct: 544 VPLLIATDVAARGLDIPNVEYVINYTFPLTIEDYVHRIGRTGRAGKTGTAFTFFTVNDKS 603
Query: 543 HAGQMIEILEQCGQVVPDAL 562
H+G+++ +L + Q VPDAL
Sbjct: 604 HSGELVNVLRETNQAVPDAL 623
>gi|116334161|ref|YP_795688.1| superfamily II DNA/RNA helicase [Lactobacillus brevis ATCC 367]
gi|116099508|gb|ABJ64657.1| Superfamily II DNA and RNA helicase [Lactobacillus brevis ATCC 367]
Length = 441
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G L+ L SQE A + V + K + ++L GA + Q L+ PE +V TP
Sbjct: 61 GTQLIVLEPSQELAIQTSRVMRDWAKLLDLQVLALTGGANVKRQTERLKK-RPEVIVGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
R+L LV+ + + + VSLL+VD D L G+TL +R P V + T P
Sbjct: 120 GRVLNLVTDRKLKLHLVSLLIVDEADDLLTGETLDTVRSIAQAAPADVQLG-FFSATDTP 178
Query: 375 AVQNL--LLG-SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVL 421
+ L G ++ R+ + + +Q + V +++LK + L
Sbjct: 179 ILHELDQWFGQTVERIDVREQDQTQGVVRHGLLQVGMGKRDQMLKRLLAL 228
>gi|421464012|ref|ZP_15912705.1| DEAD/DEAH box helicase [Acinetobacter radioresistens WC-A-157]
gi|400206386|gb|EJO37363.1| DEAD/DEAH box helicase [Acinetobacter radioresistens WC-A-157]
Length = 383
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 26/310 (8%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
L L ++E A ++ S K L F +H V+L G D Q L + +V+TP RL+
Sbjct: 82 LILAPTRELALQIESDAKELTKFTDLHLVTLLGGVDFDKQKKQLDQNFVDIIVATPGRLI 141
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFNDCLTYTSV 373
V K + + + LV+D D L + +++ + P T++F+ +Y +
Sbjct: 142 DFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMFSATFSYDVL 201
Query: 374 PAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVLDHAYGDHFHSE 432
Q L + + +A + Q V + A+ D+ K+L+ I E
Sbjct: 202 NLAQQWLFEPVT--VEIEPEKKTNADVEQRVYMVANRDKYKLLQEI----------LRDE 249
Query: 433 PL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
P+ KV+ + + + L LK GY + S I + + + MI D
Sbjct: 250 PIEKVMIFANRRDQVRRLYDHLKKDGYKVVMLSGEIAQDKRLKMLDQFKNGKHNIMIATD 309
Query: 492 HISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
++ + V V +F + + +YV + R G+ SF ++DDA + +
Sbjct: 310 -VAGRGIHVDNVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDAFY---LPA 365
Query: 550 ILEQCGQVVP 559
I + GQ +P
Sbjct: 366 IEKAIGQKLP 375
>gi|391336487|ref|XP_003742611.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Metaseiulus occidentalis]
Length = 662
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 166/403 (41%), Gaps = 77/403 (19%)
Query: 196 EQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWI-VATAADSIARKEKE 250
E+ +P+ SW I S +D+ + +G+ T+ + A+I + A +++++
Sbjct: 304 EKPSPIQCQSWPILL-----SGRDMVGIAQTGTGKTLAFLLPAFIHIRGQAPTVSKR--- 355
Query: 251 GFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFL 310
+ GP +L L ++E A ++ + I++ + GA Q++ LR PE +
Sbjct: 356 ---YEGPTVLVLSPTRELAIQIYDESRKYTYRNINSACCYGGACRGDQMSQLRK-NPEIV 411
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDC 367
++TP RL LV + A+ + VS LV+D D + IRQ ++ TV+
Sbjct: 412 IATPGRLNDLVEMMAVSLRKVSYLVLDEADRMLDMGFEPQIRQILDYMTSNRQTVM---- 467
Query: 368 LTYTSVPAVQNL-----------LLGSINRLSLNQSVASQSACIIQSVNVCASDEE---- 412
+ T P V+ L ++GS++ S + + Q + SDE+
Sbjct: 468 TSATWPPNVRKLSAKYLQDPVQVIIGSLD--------LSSALTVTQRFRMVRSDEKFPIL 519
Query: 413 -KILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSIST--------G 463
++K ++ D A + G+ + L+ G + +
Sbjct: 520 LNLMKSLKPTDRA------------IVFCGRKLTTDGVARKLQQSGINAESIHGDRDQRE 567
Query: 464 SNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTS 522
+ H++ G+ R ++ D S ++ E VV+ DF +++ YV +
Sbjct: 568 REAALRHLRT-----GKSR---ILVATDVASRGLDVPEITVVVNFDFPQNIEEYVHRVGR 619
Query: 523 MARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
R G ++ T D ++++IL Q +P+ LR+L
Sbjct: 620 TGRANAFGSSYTLMTAADRRFGPELVKILGNAKQQIPEWLRNL 662
>gi|301612898|ref|XP_002935945.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 1024
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 169/419 (40%), Gaps = 45/419 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ E+ P+ + S +D++
Sbjct: 338 GKNCPK---PIKSWVQCGISMKILNSLKKHAYEKPTPIQAQAI-----PAIMSGRDLIGI 389
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D +E EG P + + ++E A ++ CK K
Sbjct: 390 AKTGSGKTIAFLLPMFRHIMDQRPLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 444
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ +++ + ++ V+ +V+D
Sbjct: 445 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLD 503
Query: 338 RLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R +I TV+F+ + P L I + V
Sbjct: 504 EADRMFDMGFEPQVMRIIDNIRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 558
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E+ ++ + + H+ E V+ V K L+
Sbjct: 559 GRSV-------VCSDVEQHVIVIEEEKKFLKLLELLGHYQ-EKGAVIIFVDKQEHADGLL 610
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ ++++V ++
Sbjct: 611 KDLMRASYPCLSLHGGIDQYDRDSIIND-FKNGVCKLLVATSVAARGLDVKQLILVINYA 669
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
++YV R G +F T+D A +AG +I+ LE G VP L L +
Sbjct: 670 CPNHYEDYVHRAGRTGRAGNKGYAFTFITEDQARYAGDIIKALELSGTAVPAELEQLWN 728
>gi|301348040|ref|ZP_07228781.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB056]
gi|301596797|ref|ZP_07241805.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB059]
Length = 344
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 19/222 (8%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
TY + + L + + + + + + V D+ ++L+ I
Sbjct: 195 TFTYDVLNLARQWLFEPVT-VEIEPEQKTNNDVEQRVYVVAKQDKYRLLQDI-------- 245
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI 467
EP+ KV+ + + + L LK GY + S I
Sbjct: 246 --LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEI 285
>gi|325571068|ref|ZP_08146640.1| DEAD/DEAH box family ATP-dependent RNA helicase [Enterococcus
casseliflavus ATCC 12755]
gi|325156153|gb|EGC68339.1| DEAD/DEAH box family ATP-dependent RNA helicase [Enterococcus
casseliflavus ATCC 12755]
Length = 424
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
LL L SSQE A +V V + +A G+ + L GA+ Q+ L+ +PE L+ TP R+
Sbjct: 72 LLILTSSQELAMQVTEVAREWAQAIGLTVLPLIGGASTKRQVEKLKD-KPEVLIGTPGRV 130
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL 350
L+L+ K I + LV+D +D L K +L
Sbjct: 131 LELIKAKKIKTQQLQSLVLDEVDQLLKEGAFTL 163
>gi|403268867|ref|XP_003926484.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Saimiri
boliviensis boliviensis]
Length = 586
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 133/311 (42%), Gaps = 15/311 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
P +L L ++E A +V C G +V ++ G + D QI LR + +++TP R
Sbjct: 255 PGMLVLTPTRELALQVEGECGKYSYKGFRSVCVYGGGSRDEQIEELRKGV-DIIIATPGR 313
Query: 317 LLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
L L +++ ++ LV+D D L G +++ + +P +T + P
Sbjct: 314 LNDLQMNNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDR---QTVMTSATWPR 370
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSEP 433
+ L S + + V + + SV N+ + EE+ IQ + S
Sbjct: 371 SVHRLAQSYLKEPMLVYVGTLDLVAVSSVKQNIIVTTEEEKWIHIQTFLQSM-----SPT 425
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
KV+ V + + +L S L + S+ + + + K V ++ +
Sbjct: 426 DKVIVFVSRKAVADHLSSELILENMSVESLHGDREQRDREKA-LENFKTGKVRILIATDL 484
Query: 494 STAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
++ L+ +++ V DF +++ YV + R +G+ + T++D A +++ IL
Sbjct: 485 ASRGLDVHDITHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTMTRNDWRFAPELVNIL 544
Query: 552 EQCGQVVPDAL 562
++ Q +PD L
Sbjct: 545 QRANQTIPDDL 555
>gi|424671141|ref|ZP_18108156.1| DEAD/DEAH box helicase [Enterococcus faecalis 599]
gi|402359701|gb|EJU94326.1| DEAD/DEAH box helicase [Enterococcus faecalis 599]
Length = 433
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL + SQE A ++ V + K+ + +L GA + QI L+ PE L+ TP
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKSLQLTVQTLIGGANVSRQIDKLKK-RPEVLIGTP 125
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLTYTS 372
R+L+L+ K + V +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 126 GRILELMKNKKVKAQLVKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATADRV 185
Query: 373 VPAVQNL 379
V Q+L
Sbjct: 186 VNQAQSL 192
>gi|257867729|ref|ZP_05647382.1| helicase [Enterococcus casseliflavus EC30]
gi|257874057|ref|ZP_05653710.1| helicase [Enterococcus casseliflavus EC10]
gi|257801812|gb|EEV30715.1| helicase [Enterococcus casseliflavus EC30]
gi|257808221|gb|EEV37043.1| helicase [Enterococcus casseliflavus EC10]
Length = 424
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
LL L SSQE A +V V + +A G+ + L GA+ Q+ L+ +PE L+ TP R+
Sbjct: 72 LLILTSSQELAMQVTEVAREWAQAIGLTVLPLIGGASTKRQVEKLKD-KPEVLIGTPGRV 130
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL 350
L+L+ K I + LV+D +D L K +L
Sbjct: 131 LELIKAKKIKTQQLQSLVLDEVDQLLKEGAFTL 163
>gi|255319460|ref|ZP_05360674.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens SK82]
gi|262378516|ref|ZP_06071673.1| superfamily II DNA and RNA helicase [Acinetobacter radioresistens
SH164]
gi|421856913|ref|ZP_16289271.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|255303400|gb|EET82603.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens SK82]
gi|262299801|gb|EEY87713.1| superfamily II DNA and RNA helicase [Acinetobacter radioresistens
SH164]
gi|403187660|dbj|GAB75472.1| ATP-dependent RNA helicase RhlB [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 383
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 26/310 (8%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
L L ++E A ++ S K L F +H V+L G D Q L + +V+TP RL+
Sbjct: 82 LILAPTRELALQIESDAKELTKFTDLHLVTLLGGVDFDKQKKQLDQNFVDIIVATPGRLI 141
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFNDCLTYTSV 373
V K + + + LV+D D L + +++ + P T++F+ +Y +
Sbjct: 142 DFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMFSATFSYDVL 201
Query: 374 PAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVLDHAYGDHFHSE 432
Q L + + +A + Q V + A+ D+ K+L+ I E
Sbjct: 202 NLAQQWLFEPVT--VEIEPEKKTNADVEQRVYMVANRDKYKLLQEI----------LRDE 249
Query: 433 PL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
P+ KV+ + + + L LK GY + S I + + + MI D
Sbjct: 250 PIEKVMIFANRRDQVRRLYDHLKKDGYKVVMLSGEIAQDKRLKMLDQFKNGKHNIMIATD 309
Query: 492 HISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
++ + V V +F + + +YV + R G+ SF ++DDA + +
Sbjct: 310 -VAGRGIHVDNVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDAFY---LPA 365
Query: 550 ILEQCGQVVP 559
I + GQ +P
Sbjct: 366 IEKAIGQKLP 375
>gi|328865698|gb|EGG14084.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 803
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 210 FWKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W + D++ S GS TI +++ R ++ P L ++ ++E
Sbjct: 304 LWPLALTGHDLMVISPPGSGKTI---GFLLPLVPHIQHRMSQKTLVAKSPVALIVLPTRE 360
Query: 268 KAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
A +V PLK FGI V ++ G QI L++ P L++TP RLL + I
Sbjct: 361 LAQQVYRSAIPLKRHFGISAVPIYGGVDPKPQIELLKNT-PHILIATPGRLLDFIQQDII 419
Query: 327 DVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVV 363
+ GV++ V+D D LS G L IR I H ++
Sbjct: 420 SLKGVTVAVLDEADKILSMGFMPQLVQIRSQIRPNAHIIL 459
>gi|322705100|gb|EFY96688.1| ATP-dependent RNA helicase dbp3 [Metarhizium anisopliae ARSEF 23]
Length = 596
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 17/269 (6%)
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-----KPHTV 362
+ +V+TP RL +S +D+SG V+D D + I+Q + + T+
Sbjct: 297 DIIVATPGRLKDFMSDGTVDLSGCQFAVLDEADRMLDKGFEDDIKQILGACLARERRQTL 356
Query: 363 VFN-------DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL 415
+F L T + + +GS + + N SV Q+ I ++K
Sbjct: 357 MFTATWPQSVQALASTFMVDPVKITIGSGGKETENGSVELQANTRISQKVEVVDPKDKEF 416
Query: 416 KGIQVL-DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN- 473
+ +Q+L H G + L + ++ +N +S KG + + +
Sbjct: 417 RLLQILKQHQQGKQKNDRILVFCLYKKEATRVENFLSR---KGIRVGGIHGDLKQEQRTR 473
Query: 474 SVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
S+EA + V + ++ E ++VI F +++++YV + R +G H
Sbjct: 474 SLEAFKTGQTPVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGEAH 533
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+ FT D AH+G ++ IL Q VPD L
Sbjct: 534 TLFTVQDKAHSGSLVNILRGANQPVPDDL 562
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 156/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 250 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEG-----PIGVICAPTRELAHQIY 304
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L+S CE +V+TP RL+ L+ +KA+ +
Sbjct: 305 LEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSGCE--IVVATPGRLIDLLKMKALRMFRA 362
Query: 332 SLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + IR SI G +P T++F+ + Y + +L I R+
Sbjct: 363 TYLVLDEADRMFDLGFEPQIR-SIVGQIRPDRQTLLFSATMPYKVERLAREILTDPI-RV 420
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V S + I Q VNV SD EK+ ++ + D VL K ++
Sbjct: 421 TVGQ-VGSANEDIKQVVNVLPSDAEKMPWLLEKMPGMIDDG------DVLVFATKKARVD 473
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ + L G+ ++ DKD S E + Y
Sbjct: 474 EVENQLNQHGFKVAALHG-----------------------DKDQASRMETLQKFKSGIY 510
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ ++
Sbjct: 511 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKESR 570
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG+++ L GQ VP+ L DL
Sbjct: 571 FAGELVHSLIAAGQDVPNELMDLA 594
>gi|193666978|ref|XP_001948493.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Acyrthosiphon pisum]
Length = 666
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 38/331 (11%)
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT----VSLHPGAAIDHQITGLRSCEPEF 309
+ GP +L L ++E A +++ V +FG T + GA Q+ L E
Sbjct: 193 YDGPIVLVLAPTRELAQQIQQVAV---SFGTSTFVRNTCVFGGAPKGPQVDDLERGV-EI 248
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCL 368
+++TP RL+ + ++ + LV+D D + IR+ I +P V
Sbjct: 249 VIATPGRLIDFLERNTTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA 308
Query: 369 TYTSVPAVQNLL-----------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKG 417
T+ P V+NL +GS+N LS N +++ Q V+VC D EK K
Sbjct: 309 TWP--PEVKNLAEEFLDDYIQVNVGSLN-LSANHNIS-------QVVDVC-DDYEKEQKL 357
Query: 418 IQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY-SISTGSNCIVSHIKNSVE 476
+L D F K + V N+V + G+ SI N + +++
Sbjct: 358 YALLT----DIFSQPDNKTIIFVETKRSVDNIVKLVNRNGWRSIGIHGNKSQNERDHTLN 413
Query: 477 ADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
R A ++ D + ++++ + VI D+ S ++YV + R + +G +F
Sbjct: 414 -QFRSGQANILVATDVAARGLDVDDVKYVINFDYPNSSEDYVHRIGRTGRSSRTGTAFTF 472
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
T +A A +I +L++ QVV L +L
Sbjct: 473 VTPSNARQAKDLISVLQEAKQVVNPKLFELA 503
>gi|257876634|ref|ZP_05656287.1| helicase [Enterococcus casseliflavus EC20]
gi|257810800|gb|EEV39620.1| helicase [Enterococcus casseliflavus EC20]
Length = 424
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
LL L SSQE A +V V + +A G+ + L GA+ Q+ L+ +PE L+ TP R+
Sbjct: 72 LLILTSSQELAMQVTEVAREWAQAIGLTVLPLIGGASTKRQVEKLKD-KPEVLIGTPGRV 130
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL 350
L+L+ K I + LV+D +D L K +L
Sbjct: 131 LELIKAKKIKTQQLQSLVLDEVDQLLKEGAFTL 163
>gi|259046649|ref|ZP_05737050.1| ATP-dependent RNA helicase RhlE [Granulicatella adiacens ATCC
49175]
gi|259036814|gb|EEW38069.1| ATP-dependent RNA helicase RhlE [Granulicatella adiacens ATCC
49175]
Length = 395
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLK 319
L + SQE A ++ +V + K I L GA + Q+ L+ +PE +V TP RLL+
Sbjct: 63 LIVAPSQELAQQIGTVIREWKPLEIRVQVLAGGANVKRQVEKLKE-KPEIVVGTPGRLLE 121
Query: 320 LVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP 359
L L+ + + V LLV+D D L + L+ R+ + P
Sbjct: 122 LSKLRKLKLHQVELLVLDEADYLLDPEQLNNTRELVKKLP 161
>gi|301612896|ref|XP_002935944.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 1049
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 169/419 (40%), Gaps = 45/419 (10%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ E+ P+ + S +D++
Sbjct: 363 GKNCPK---PIKSWVQCGISMKILNSLKKHAYEKPTPIQAQAI-----PAIMSGRDLIGI 414
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D +E EG P + + ++E A ++ CK K
Sbjct: 415 AKTGSGKTIAFLLPMFRHIMDQRPLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 469
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSL---KAIDVSGVSLLVVD 337
G+ V ++ G I QI L+ E +V TP R++ +++ + ++ V+ +V+D
Sbjct: 470 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLD 528
Query: 338 RLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R +I TV+F+ + P L I + V
Sbjct: 529 EADRMFDMGFEPQVMRIIDNIRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVG 583
Query: 395 SQSACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+S VC+ E+ ++ + + H+ E V+ V K L+
Sbjct: 584 GRSV-------VCSDVEQHVIVIEEEKKFLKLLELLGHYQ-EKGAVIIFVDKQEHADGLL 635
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFI 510
L Y + I + ++S+ D K ++ ++ L+ ++++V ++
Sbjct: 636 KDLMRASYPCLSLHGGIDQYDRDSIINDF-KNGVCKLLVATSVAARGLDVKQLILVINYA 694
Query: 511 IS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
++YV R G +F T+D A +AG +I+ LE G VP L L +
Sbjct: 695 CPNHYEDYVHRAGRTGRAGNKGYAFTFITEDQARYAGDIIKALELSGTAVPAELEQLWN 753
>gi|427423258|ref|ZP_18913417.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-136]
gi|425699903|gb|EKU69501.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-136]
Length = 383
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKFLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 245
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYRVGMLSGEIAQDKRLKMLEQFKQGK 301
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 302 HNIMIATD-VAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGSQGVSISFLSEDDA 360
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 361 FY---LPEIEKAIGKKLP 375
>gi|420264036|ref|ZP_14766671.1| DEAD/DEAH box family ATP-dependent RNA helicase [Enterococcus sp.
C1]
gi|394768935|gb|EJF48812.1| DEAD/DEAH box family ATP-dependent RNA helicase [Enterococcus sp.
C1]
Length = 424
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
LL L SSQE A +V V + +A G+ + L GA+ Q+ L+ +PE L+ TP R+
Sbjct: 72 LLILTSSQELAMQVTEVAREWAQAIGLTVLPLIGGASTKRQVEKLKD-KPEVLIGTPGRV 130
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSL 350
L+L+ K I + LV+D +D L K +L
Sbjct: 131 LELIKAKKIKTQQLQSLVLDEVDQLLKEGAFTL 163
>gi|148230348|ref|NP_001079703.1| Probable ATP-dependent RNA helicase DDX5-like [Xenopus laevis]
gi|28838521|gb|AAH47981.1| MGC53795 protein [Xenopus laevis]
Length = 607
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 10/316 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP LL L ++E A +V+ V +A + T ++ GA QI L E ++TP
Sbjct: 163 GPILLVLAPTRELAQQVQQVAAEYGRACRLRTTCIYGGAPKGPQIRDLERGV-EICIATP 221
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + +++ + LV+D D + IR+ + +P T+
Sbjct: 222 GRLIDFLEAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 281
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L +++ S + I+Q V+VC +D EK K +++++ + +
Sbjct: 282 VRQLAEDFLKEYVHINIGALELSANHNILQIVDVC-NDGEKDDKLVRLMEEIMSEKEN-- 338
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L L+ G+ ++ V + + + +I D
Sbjct: 339 --KTIVFVETKRRCDDLTRRLRRDGWPAMGIHGDKSQQERDWVLNEFKHGKSPILIATDV 396
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR + +G ++FFT + ++ +L
Sbjct: 397 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVNDLVSVL 456
Query: 552 EQCGQVVPDALRDLCH 567
+ Q + L L
Sbjct: 457 REANQAINPKLLQLVE 472
>gi|45361303|ref|NP_989229.1| DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Xenopus (Silurana)
tropicalis]
gi|38969901|gb|AAH63223.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Xenopus (Silurana)
tropicalis]
gi|89271852|emb|CAJ81861.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Xenopus (Silurana)
tropicalis]
Length = 609
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 134/308 (43%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP LL L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 165 GPILLVLAPTRELAQQVQQVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + +++ + LV+D D + IR+ I T++++
Sbjct: 224 GRLIDFLEAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L ++ +++ S + I+Q V+VC +D EK K +++++ + +
Sbjct: 284 VRQLAEDFLRDYVH-INIGALELSANHNILQIVDVC-NDGEKDEKLVRLMEEIMSEKEN- 340
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + +L L+ G+ ++ V + + + +I D
Sbjct: 341 ---KTIVFVETKRRCDDLTRRLRRDGWPAMGIHGDKSQQERDWVLNEFKHGKSPILIATD 397
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR + +G ++FFT + +I +
Sbjct: 398 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVNDLISV 457
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 458 LREANQAI 465
>gi|400597011|gb|EJP64755.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 600
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 22/292 (7%)
Query: 287 VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGD 346
V L+ G++ D Q L + + +V+TP RL +S +D+SG V+D D +
Sbjct: 281 VCLYGGSSKDEQ-RALINRGADIIVATPGRLKDFMSDDTVDLSGCQFAVLDEADRMLDKG 339
Query: 347 TLSLIRQSISGKP-----HTVVFN-------DCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
I+Q + P T++F L T + + +G + + N +V
Sbjct: 340 FEDDIKQILGSCPPRENRQTLMFTATWPFSVQTLASTFMVEPVKITIGCGGKETENGAVE 399
Query: 395 SQSAC-IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD-SKFQNLVST 452
Q+ I Q V V ++K + +QVL A ++ + V + K+ ++ +N +S
Sbjct: 400 LQANTRITQRVEVL-DGKDKEFRLLQVLKQAQQGSKKNDRILVFCLYKKEATRVENFLSR 458
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFI 510
KG + G + + + + + K ++ ++ L+ E ++V+ F
Sbjct: 459 ---KGIRVG-GIHGDLRQEQRTKALESFKLGHTPVLVATDVAARGLDIPEVKLVVNVTFP 514
Query: 511 ISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+++++YV + R +G +FFT D AH+G ++ IL+ Q VPD L
Sbjct: 515 LTIEDYVHRIGRTGRAGKTGDAITFFTAQDKAHSGSLVNILKGANQPVPDEL 566
>gi|357445503|ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
Length = 1148
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 42/332 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S + K K GI V ++ G+ + QI+ L+ E +V TP
Sbjct: 606 GPIGLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGT-EIVVCTP 664
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ S K ++ V+ LV+D D + ++ I Q+I TV+F+
Sbjct: 665 GRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFS--- 721
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
+ P +L + + V +S I Q V V +E L
Sbjct: 722 --ATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERF-----LRLLELL 774
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEA 477
G+ + E K+L V K L L GY T +S K++V
Sbjct: 775 GEWY--EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNV-- 830
Query: 478 DGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+++ I+ L+ E E+VI D ++YV + R G +F
Sbjct: 831 -------CNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITF 883
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+++DA +A +++ LE Q+VPD L+ L
Sbjct: 884 ISEEDARYAPDLVKALELSEQIVPDDLKSLAE 915
>gi|452848275|gb|EME50207.1| hypothetical protein DOTSEDRAFT_68922 [Dothistroma septosporum
NZE10]
Length = 936
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 143/348 (41%), Gaps = 67/348 (19%)
Query: 253 SFTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
+ GP + + ++E A ++ CKP LKA + V + GA I QI L+ E +V
Sbjct: 362 NLEGPIGIIMAPTRELAVQIHRECKPYLKALSLRGVCAYGGAPIKDQIAELKRGA-EVVV 420
Query: 312 STPERLLKLVSLKAIDVSGVSLLV------VDRLDSLSKGDTLSLIRQSISGKPHTVVFN 365
TP R++ L++ A V+ +S + DR+ + ++ I +I TV F+
Sbjct: 421 CTPGRMIDLLAANAGRVTNLSRVTYVVMDEADRMFDMGFEPQITKILGNIRPDRQTVTFS 480
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSV-------ASQSACIIQSVNVCASDEEKILKGI 418
+ S+ R +LN+ V + +A I Q + V ++E K + +
Sbjct: 481 ATFPKK---------MESLARKALNKPVEIVVGGRSVVAAEITQLIEV-RTEEMKFRRVL 530
Query: 419 QVLDHAYGD-HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEA 477
Q+L GD H E + L V + +++ L KGY C+ H
Sbjct: 531 QLL----GDLHERDEDARSLIFVERQETADDMLKELGKKGYP------CVSVH------- 573
Query: 478 DGRKRPAVSMIDKDH-------------ISTA------ELEEYEVVIVPDFIISMKNYVE 518
GR++ ID+D ++T+ ++++ ++VI D ++YV
Sbjct: 574 GGREQ-----IDRDQAILDFKAGIIPIMVATSVAARGLDVKQLKLVINYDSPNHGEDYVH 628
Query: 519 ILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
R +G + T + A ++ L+ Q VP L+++
Sbjct: 629 RAGRTGRAGQTGTAVTLLTPEQERFAPFLVRALQDSKQEVPQELQEMA 676
>gi|441178602|ref|ZP_20970043.1| DEAD/DEAH box helicase domain protein, partial [Streptomyces
rimosus subsp. rimosus ATCC 10970]
gi|440614503|gb|ELQ77770.1| DEAD/DEAH box helicase domain protein, partial [Streptomyces
rimosus subsp. rimosus ATCC 10970]
Length = 440
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 185 AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQIAWIVATAAD 242
A++ A+R GV + P+ + + +D+L +GS T+ A+ +A +
Sbjct: 36 ALQTALRAQGVTEPFPIQAATL-----PATLAGQDVLGRGRTGSGKTL---AFGLAMLSR 87
Query: 243 SIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITG 301
+ R+ + P L LV ++E A +V P A G+ T ++ G +I+ QI
Sbjct: 88 TAGRRAES----KSPLALVLVPTRELATQVTDALAPYAAAVGLRTTTVVGGTSINRQIAA 143
Query: 302 LRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLS 343
LR E LV+TP RL L+ +A + V++ V+D D ++
Sbjct: 144 LRKGA-EILVATPGRLADLLDRRACTLGQVAITVLDEADQMT 184
>gi|417879361|ref|ZP_12523933.1| ATP-dependent RNA helicase RhlB, partial [Acinetobacter baumannii
ABNIH3]
gi|342228819|gb|EGT93696.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH3]
Length = 373
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 123/300 (41%), Gaps = 22/300 (7%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+Y + + L + + + + + + V D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVT-VEIEPEQKTNNDVEQRVYVVAKQDKYRLLQDI-------- 245
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 --LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGKHN 303
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAH 543
MI D ++ + V V +F + + +YV + R G+ SF ++DDA +
Sbjct: 304 IMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDAFY 362
>gi|330842567|ref|XP_003293247.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
gi|325076448|gb|EGC30233.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
Length = 551
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVST 313
GP LFL ++E A ++ K K F + T L+ G + Q L++ CE +VST
Sbjct: 181 GPIALFLAPTRELAQQIYLETLKYSKYFKLRTTVLYGGVSKQQQCKELKAGCE--IVVST 238
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTY 370
P RL+ ++ LKA ++ V+ LV+D D + G + I + T++F+
Sbjct: 239 PGRLIDMIKLKATKLNRVTYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKQ 298
Query: 371 TSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK 413
+++L I ++S+ Q+ S ++ I Q V V S+ EK
Sbjct: 299 NVEDFARSILTDPI-KISIGQA-GSANSDITQIVQVLKSESEK 339
>gi|148701846|gb|EDL33793.1| mCG19408 [Mus musculus]
Length = 615
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 134/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I +++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLILLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V ++ + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLSEFKHGKASILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ A +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQASDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|359488682|ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
[Vitis vinifera]
Length = 863
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++++ VVI DF +++YV + R +G+ ++FF + DA +A ++++LE Q
Sbjct: 472 DIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQ 531
Query: 557 VVPDALRDLC 566
VP +RD+
Sbjct: 532 RVPPEIRDMA 541
>gi|312874238|ref|ZP_07734272.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 2052A-d]
gi|311090308|gb|EFQ48718.1| DEAD/DEAH box helicase [Lactobacillus iners LEAF 2052A-d]
Length = 405
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G + L + E A + ++V P +KA G+ +++L + Q+ L+ +P L++TP
Sbjct: 61 GGLAVILEPTSELAVQTKNVLLPYVKALGLKSIALVGAGNRNRQMEQLKKEKPSILIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL---SKGDTLSLIRQSISGKPHTVVF 364
RL +S K I+ + LV+D D + +K + LS + Q++S V+F
Sbjct: 121 GRLFDFISAKKINYQDIKALVIDEADDILEFAKLNLLSALGQNLSSDAQIVLF 173
>gi|302922639|ref|XP_003053509.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
gi|256734450|gb|EEU47796.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
Length = 1201
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 144/319 (45%), Gaps = 48/319 (15%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK G+ +V + GA I QI L+ E +V TP
Sbjct: 676 GPIGLIMTPTRELAVQIHRDCKPFLKMMGLRSVCAYGGAPIREQIAELKRGA-EIIVCTP 734
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ V+ +V+D D + G +++ + +P T++F+
Sbjct: 735 GRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDKQTILFS--- 791
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
++P + + L + + + +V +S V A + E+I ++V D
Sbjct: 792 --ATMPRIIDSLTKKVLKNPIEVTVGGRS--------VVAKEIEQI---VEVRDEP---- 834
Query: 429 FHSEPLKVLYIVGK-DSKFQNLVSTLKCKGYSISTGSNCIVS-HIKNSVEADGRKRPAVS 486
S+ L+VL ++G+ + ++ + +IS +V I SV A G
Sbjct: 835 --SKFLRVLELLGELYDRDEDARKDQVDRDSTISDFKKGVVPILIATSVAARG------- 885
Query: 487 MIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
++++ ++VI D +++YV R +G+ +F T + A
Sbjct: 886 ---------LDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAPG 936
Query: 547 MIEILEQCGQVVPDALRDL 565
+ + LEQ GQ VP+ L ++
Sbjct: 937 IAKALEQSGQPVPERLNEM 955
>gi|45709504|gb|AAH67585.1| Ddx5 protein [Danio rerio]
Length = 496
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V KA I + ++ GA QI L E ++TP
Sbjct: 169 GPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGV-EICIATP 227
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 228 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 287
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +D EK K I++L+ + +
Sbjct: 288 VRQLAEDFLKEYIQINVGALQLSANHNILQIVDVC-NDGEKEDKLIRLLEEIMSEKEN-- 344
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 345 --KTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDV 402
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ + ++Y+ + AR +G ++FFT ++ A ++ +L
Sbjct: 403 ASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVL 462
Query: 552 EQCGQVV 558
+ Q +
Sbjct: 463 REANQAI 469
>gi|359488684|ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
[Vitis vinifera]
Length = 828
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++++ VVI DF +++YV + R +G+ ++FF + DA +A ++++LE Q
Sbjct: 472 DIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQ 531
Query: 557 VVPDALRDLC 566
VP +RD+
Sbjct: 532 RVPPEIRDMA 541
>gi|378731790|gb|EHY58249.1| ATP-dependent RNA helicase [Exophiala dermatitidis NIH/UT8656]
Length = 524
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 143/312 (45%), Gaps = 32/312 (10%)
Query: 271 KVRSVCKPLKAFG--IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDV 328
++ +CK + G + V ++ G D Q L+ +V+TP RL +S IDV
Sbjct: 191 QIDKLCKTATSAGQKLKPVCIYGGTNKDEQRRSLQGAN--IVVATPGRLKDFMSDGTIDV 248
Query: 329 SGVSLLVVDRLDS-LSKG---DTLSLIRQ-SISGKPHTVVFNDCLTYTSVPAVQNL---L 380
S LV+D D L KG D +I Q S K T +F T T ++++L
Sbjct: 249 SKTRYLVLDEADRMLDKGFEDDIKHIISQMPSSSKRQTAMF----TATWPKSIRDLAATF 304
Query: 381 LGSINRLSLNQSVASQSA------CIIQSVNVC-ASDEEKILKGIQVLDHAYGDHFHSEP 433
+ ++++ ++ A S I+Q + V SD++ L +Q+L ++
Sbjct: 305 MKEPVKITIGRNDADDSGELRANTRIVQKIEVMDGSDKQNRL--LQLLREHTAGKKRNDR 362
Query: 434 LKVLYIVGKDS-KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
+ V + K++ + +N + + +G++++ G + +S + K +VS++
Sbjct: 363 ILVFCLYKKEALRIENFI---RSRGFNVA-GIHGDMSQSARIASLEAFKSGSVSLLVATD 418
Query: 493 ISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
++ L+ E ++VI F ++ ++YV + R G+ + FT+ D A AG ++ +
Sbjct: 419 VAARGLDIPEVKLVINVTFPLTAEDYVHRIGRTGRAGKEGLAITMFTEQDKALAGALVNV 478
Query: 551 LEQCGQVVPDAL 562
L Q VP+ L
Sbjct: 479 LRAAKQDVPEDL 490
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 155/384 (40%), Gaps = 72/384 (18%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +DI+ +GS T + ++ D +++EG P + ++E A ++
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG-----PIGVICAPTRELAHQIY 309
Query: 274 SVCKPL-KAFGIHTVSLHPGAAIDHQITGLRS-CEPEFLVSTPERLLKLVSLKAIDVSGV 331
K K + + +++ G + Q L++ CE +++TP RL+ L+ +KA+ +
Sbjct: 310 LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE--VVIATPGRLIDLLKMKALKMFRA 367
Query: 332 SLLVVDRLDSLSKGDTLSLIRQSISG--KP--HTVVFNDCLTYTSVPAVQNLLLGSINRL 387
+ LV+D D + IR SI G +P T++F+ + Y + +L I R+
Sbjct: 368 TYLVLDEADRMFDLGFEPQIR-SIVGQIRPDRQTLLFSATMPYKVERLAREILTDPI-RV 425
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ Q V + I Q VNV SD EK+ ++ L D VL K ++
Sbjct: 426 TVGQ-VGGANEDIKQVVNVLPSDVEKMPWLLEKLPGMIDDG------DVLVFASKKARVD 478
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEE------Y 501
+ L +G+ I+ DKD S E + Y
Sbjct: 479 EIEKELNQRGFRIAALHG-----------------------DKDQASRMETLQKFKSGTY 515
Query: 502 EVVIVPDF------IISMKNYV--EILTSMARHT-----------VSGILHSFFTKDDAA 542
V++ D I S+K V +I M H G ++ T+ +A
Sbjct: 516 HVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEAR 575
Query: 543 HAGQMIEILEQCGQVVPDALRDLC 566
AG+++ L GQ VP+ L DL
Sbjct: 576 FAGELVHSLIAAGQDVPNELMDLA 599
>gi|426257987|ref|XP_004022602.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX53 [Ovis aries]
Length = 631
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 157/385 (40%), Gaps = 20/385 (5%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIAWIVATAADSIA 245
I ++R G ++ P+ +W I I +T + + + + ++
Sbjct: 236 IMQSIRRAGFQKPTPIQSQAWPIILQGI--DLIGIAQTGTGKTLSYLMPGFIHIHSQPVS 293
Query: 246 RKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSC 305
RK++ GP +L L ++E A +V + C G+ +V ++ G QI + +
Sbjct: 294 RKQR-----NGPGMLVLTPTRELALQVEAECSKYLYKGLKSVCIYGGGNRKGQIQDV-TK 347
Query: 306 EPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVF 364
+ +++TP RL L +++ ++ LV+D D L G +++ + +P
Sbjct: 348 GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDR--- 404
Query: 365 NDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLD 422
+T S P L S + + V + + +V N+ + EE+ IQ
Sbjct: 405 QTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVAVNTVKQNIIVTTEEEKRSLIQEFL 464
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
+ S KV+ VG+ +L S L +G + + ++ D R
Sbjct: 465 QSL-----SPKDKVIVFVGRKLVADDLSSDLSIQGIPVQSLHGDREQCDRDQALEDFRTG 519
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I D S ++ + V +F +++ YV + R +G + T+DD
Sbjct: 520 RVKILIATDLASRGLDVTDVTHVYNYNFPRNIEEYVHRVGRTGRAGKTGESITLVTQDDW 579
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
A ++I+IL++ Q+VP LR +
Sbjct: 580 KIADELIKILQRANQIVPPNLRSMA 604
>gi|407915825|gb|EKG09337.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 737
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 132/300 (44%), Gaps = 25/300 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ +V ++ G D Q GL+ +V+TP RL L+ A D+S +V+D D +
Sbjct: 420 GLKSVCIYGGVPKDEQKAGLKKAS--IVVATPGRLNDLIDEGAADISKAGYVVLDEADRM 477
Query: 343 SKGDTLSLIRQSISG-KP----HTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVA 394
IR+ IS +P T++F T T +VQ L + S ++++ +
Sbjct: 478 LDKGFEDAIRKIISSTRPINERQTLMF----TATWPKSVQELASTFMKSPVKITIGDNPT 533
Query: 395 SQ---SACIIQSVNVCASDEEKILKGIQVL-DHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+ + I Q+V V +K + Q+L +H G + ++L + +
Sbjct: 534 GELRANTRITQTVEVV-DPRDKEYRLTQILKEHTAGSKKND---RILIFCLYKKEATRVE 589
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPD 508
TL+ KG+ + G + +S + + + K+ + ++ ++ L+ ++V+
Sbjct: 590 ETLRRKGFKVG-GIHGDLSQAQRTASLEKFKKGEIPLLVATDVAARGLDIPAVKLVVNVT 648
Query: 509 FIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
F ++ ++YV + R G + FT+ D AG ++ +L+ Q VP+ L T
Sbjct: 649 FPLTAEDYVHRIGRTGRAGQDGKAITLFTEHDKPLAGALVNVLKGANQPVPEELMKFGTT 708
>gi|330792086|ref|XP_003284121.1| hypothetical protein DICPUDRAFT_27074 [Dictyostelium purpureum]
gi|325085935|gb|EGC39333.1| hypothetical protein DICPUDRAFT_27074 [Dictyostelium purpureum]
Length = 593
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP +L L ++E A +++ + FG I V ++ GA+ Q+ L+ E ++
Sbjct: 292 GPIVLVLAPTRELALQIQEQAR---KFGGTSQISNVCVYGGASKHSQVMMLKKGV-EIVI 347
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCL 368
+TP RL+ +++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 348 ATPGRLIDILTSGDTNLRRVTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQTLMFSATW 407
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE--EKILKGIQVLDHAYG 426
V ++ N L ++ + S + + + Q V VC+ E E++ K ++
Sbjct: 408 P-KEVQSLANDFLSDHIQVHIGSSELTANHNVNQIVEVCSEYEKKERLFKFLEAN----- 461
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGY-SISTGSN-------CIVSHIKNSVEAD 478
S+ KV+ L +L+ G+ SI N ++S KN +
Sbjct: 462 ---VSKDDKVIIFAETRKGVDELHRSLQSAGFKSIGIHGNKSQPERDFVLSQFKNGIFP- 517
Query: 479 GRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
MI D S ++++ + V+ DF +++ YV + AR +G SF T
Sbjct: 518 -------IMIATDLASRGLDVKDIKFVVNYDFPNTIETYVHRIGRTARAGATGTSISFLT 570
Query: 538 KDDAAHAGQMIEILEQCGQV 557
+++A A +I++L + Q+
Sbjct: 571 RENARLANDLIKVLSEAKQI 590
>gi|426395398|ref|XP_004063960.1| PREDICTED: probable ATP-dependent RNA helicase DDX53 [Gorilla
gorilla gorilla]
Length = 629
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 159/369 (43%), Gaps = 41/369 (11%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQI-AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W D++E +G+ T+ + + + I+R+++ GP +L L ++E
Sbjct: 253 WPIILQGIDLIEVAQTGTGKTLSYLMPGFIHLDSQPISREQR-----NGPGMLVLTPTRE 307
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A V + C G+ ++ ++ G + QI + S + +++TP RL L +++
Sbjct: 308 LALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDI-SKGVDIIIATPGRLNDLQMNNSVN 366
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLI----------RQSI--SGKPHTVVFNDCLTYTSVPA 375
+ ++ LV+D D + + I RQ++ S V L+Y P
Sbjct: 367 LRSITYLVIDEADKMLDMEFEPQIMKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPM 426
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ + +G++N +++N + Q++ V E++ L V + + + K
Sbjct: 427 I--VYVGNLNLVAVN--------TVKQNIIVTTEKEKRALTQEFVENMSPNN-------K 469
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKRPAVSMIDKDHIS 494
V+ V + +L S +G S S N S + +VE D + +I D +S
Sbjct: 470 VIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVE-DFKSGNIKILITNDIVS 528
Query: 495 TA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQ 553
+L V DF ++ YV + + R +G + T+ D+ AG++I+IL++
Sbjct: 529 RGLDLNGVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDR 588
Query: 554 CGQVVPDAL 562
Q VP+ L
Sbjct: 589 ANQSVPEDL 597
>gi|365904929|ref|ZP_09442688.1| ATP-dependent RNA helicase [Lactobacillus versmoldensis KCTC 3814]
Length = 408
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
+ + KDI + +GS T+ + ++ T K+G +L L SQE
Sbjct: 30 YLPFKEGKDIVAMAPTGSGKTLGFVMPMIETLV------PKDGLQ-----ILILEPSQEL 78
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +VR+V +PL KA G ++ GA Q+ L+ +PE LV+T RL +L + +
Sbjct: 79 AIQVRTVIQPLAKAVGCSVQAVTGGANPQRQLKKLKE-KPEILVATLGRLKELTDSRKVK 137
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTV 362
+ V ++VD D + L +RQ++ P V
Sbjct: 138 LGNVQTVIVDEADEMLNETKLDSVRQTLDLMPADV 172
>gi|320163352|gb|EFW40251.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 1073
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 39/329 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A + + CK A + TV L+ G+AI QI L+ E +V TP
Sbjct: 443 GPIGLILTPTRELAVQTYTECKRFAAPNQLRTVCLYGGSAITEQIADLKRGA-EIIVCTP 501
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCL 368
R++ ++ S + ++ V+ LV+D D + G ++R +I TV+F+
Sbjct: 502 GRMIDMLTANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMRIVNNIRPARQTVLFS--- 558
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEKILKGIQVLDHAY 425
+ P L I S Q + + + + ++ + + EK L+ +++L
Sbjct: 559 --ATFPRSMETLAYKILHHSPLQIIVGGRSIVSKEIDQHVLVIPEAEKYLRLLELLG--- 613
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
E V+ V + L+ +L GY C+ H ++ R+ +
Sbjct: 614 ---VWQEEGSVIVFVERQEAADMLLKSLYASGYP------CLSLHA--GLDQGDREETLI 662
Query: 486 SMIDKD---HISTA------ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
+ D I+T+ +++E ++V+ D ++YV + R G ++F
Sbjct: 663 AFKAGDVRLLIATSVAARGLDVKELKLVVNYDAPNHYEDYVHRVGRTGRAGRKGTSYTFL 722
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDALRDL 565
T + AG ++ L+ G VP+ L+ L
Sbjct: 723 TPEQGRFAGDILNALQLSGANVPEELKQL 751
>gi|321260432|ref|XP_003194936.1| ATP-dependent RNA helicase DBP2 (p68-like protein) [Cryptococcus
gattii WM276]
gi|317461408|gb|ADV23149.1| ATP-dependent RNA helicase DBP2 (p68-like protein), putative
[Cryptococcus gattii WM276]
Length = 537
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 141/323 (43%), Gaps = 27/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ K ++ I +++ GA QI L+ E V+TP
Sbjct: 182 GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGV-EICVATP 240
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 241 GRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKE 300
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ L +GS++ L+ N +VA Q V VC +++ ++L H
Sbjct: 301 VQRLAMDFLHDFIQVNIGSLD-LTANHNVA-------QHVEVCTDFDKRS----KLLSHL 348
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ E KVL V +L L+ G+ ++ V A+ + +
Sbjct: 349 --EKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRS 406
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
M+ D S ++ + VI DF + ++Y+ + R G +++FT D++
Sbjct: 407 PIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKS 466
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
A ++++IL + +P L ++
Sbjct: 467 ARELVQILRESKADIPPELEEMA 489
>gi|39104531|dbj|BAC98030.2| mKIAA0801 protein [Mus musculus]
Length = 1044
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 168/415 (40%), Gaps = 46/415 (11%)
Query: 166 GQACEKLDCPSKFLILCLNAIE--NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
G+ C K P K + C +++ N+++ G E+ P+ + S +D++
Sbjct: 381 GKGCPK---PIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAI-----PAIMSGRDLIGI 432
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-K 280
+GS TI + + D + +E EG P + + ++E A ++ CK K
Sbjct: 433 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEG-----PIAVIMTPTRELALQITKECKKFSK 487
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA----IDVSGVSLLVV 336
G+ V ++ G I QI L+ E +V TP R++ +++ + + SLL V
Sbjct: 488 TLGLRVVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGKSRVFYYLFSLLFV 546
Query: 337 DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQ 396
LD + L ++ ++ TV+F+ + P L I + V +
Sbjct: 547 --LDMIFVEADLRIV-DNVRPDRQTVMFS-----ATFPRAMEALARRILSKPIEVQVGGR 598
Query: 397 SACIIQSVNVCASDEEKIL----KGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
S VC+ E++++ + + H+ E V+ V K L+
Sbjct: 599 SV-------VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVIIFVDKQEHADGLLKD 650
Query: 453 LKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIIS 512
L Y + I + ++S+ D K ++ ++ L+ +++V ++
Sbjct: 651 LMRASYPCMSLHGGIDQYDRDSIIND-FKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 709
Query: 513 --MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
++YV R G ++F T+D A +AG +I+ LE G VP L L
Sbjct: 710 NHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 764
>gi|332686285|ref|YP_004456059.1| ATP-dependent RNA helicase YfmL [Melissococcus plutonius ATCC
35311]
gi|332370294|dbj|BAK21250.1| ATP-dependent RNA helicase YfmL [Melissococcus plutonius ATCC
35311]
Length = 390
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
+G LL + SQE A ++ V + K + T L GA I Q+ L+ +PE +V T
Sbjct: 66 SGNQLLIIAPSQELAMQITRVAQEWGKLLQLKTQVLIGGANIHRQVEKLKQ-KPEIVVGT 124
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ--SISGKPHTVVFNDCLTYT 371
P R+ +L+ +K I + + +V+D +D L + D L++ +Q + S + +VF
Sbjct: 125 PGRIFELMKMKKIKSNSLRTIVIDEVDQLLQQDELTITKQLLNYSAFNYQIVFFSATAKN 184
Query: 372 SVPAVQNLL 380
+ +NL+
Sbjct: 185 VLTEAENLV 193
>gi|167824801|ref|ZP_02456272.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 9]
Length = 351
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 19 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 74
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 75 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 134
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 135 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 187
>gi|257783884|ref|YP_003179101.1| DEAD/DEAH box helicase [Atopobium parvulum DSM 20469]
gi|257472391|gb|ACV50510.1| DEAD/DEAH box helicase domain protein [Atopobium parvulum DSM
20469]
Length = 450
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 32/298 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTP 314
P L + ++E AA++ +V K + A G V + GA HQI L + C+ LV+TP
Sbjct: 105 PRALIVTPTRELAAQIDNVAKSVCASTGQQAVIVTGGAHYKHQIAALQKGCD--VLVATP 162
Query: 315 ERLLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
RL+ L+ K + + +LV+ DR+ + ++ I + + T++F+ L
Sbjct: 163 GRLIDLLDKKHTSLEDIQVLVLDEADRMLDMGFWPSVHRIMEQLPKAHQTLLFSATLP-A 221
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQS--VNVCASDEEKILKGIQVLDHAYGDHF 429
S+ + + LL R+ + ++ Q+A I+ +V + ++LK A D F
Sbjct: 222 SITSTIDALLKDPERIEIART--GQTAATIEQHLCSVTQGQKPQLLK-------ALIDSF 272
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI----KNSVEADGRKRPAV 485
P +VL S+ ++ LK G + V H K +A R R A
Sbjct: 273 DPAPERVLVFCRTKSRVDSIYKNLKAAGLKVD------VMHADRPQKARAKALDRFRSAS 326
Query: 486 --SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
++ D +S +++ +VVI D + ++YV + R +G ++F D+
Sbjct: 327 IQILVATDVMSRGIDIQGIDVVINFDVPLDPEDYVHRIGRTGRAGATGQAYTFMGPDE 384
>gi|388852229|emb|CCF54040.1| probable RNA helicase dbp2 (DEAD box protein) [Ustilago hordei]
Length = 564
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 137/323 (42%), Gaps = 29/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG + T +++ G QI L+ E +
Sbjct: 215 GPIALILAPTRELANQIQVECN---RFGGSSRLRTCAVYGGVPKGPQIRDLQRGA-EICI 270
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCL 368
+TP RL+ +V ++ V+ LV+D D + IR Q I T++F
Sbjct: 271 ATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMF---- 326
Query: 369 TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEK--ILKGIQVLDH 423
+ T VQ L L ++++ + + + + Q + VC+ E+K ++ ++ +
Sbjct: 327 SATWPKEVQRLAGDFLNDFAQVNIGSTELAANHNVKQIIEVCSEFEKKGKLIGHLETISQ 386
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
G KV+ +L L+ G+ ++ V A+ +
Sbjct: 387 ENG--------KVIIFTSTKRVADDLTKYLRQDGWPALAIHGDKQQQERDWVLAEFKSGR 438
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
+ M+ S ++++ VI DF + ++YV + R +G +++FT +++
Sbjct: 439 SPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSK 498
Query: 543 HAGQMIEILEQCGQVVPDALRDL 565
A ++I IL + Q +P + ++
Sbjct: 499 SARELIGILREAKQEIPREIEEM 521
>gi|29375590|ref|NP_814744.1| DEAD/DEAH box helicase [Enterococcus faecalis V583]
gi|257418599|ref|ZP_05595593.1| helicase [Enterococcus faecalis T11]
gi|422713488|ref|ZP_16770238.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309A]
gi|422717485|ref|ZP_16774169.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309B]
gi|422735183|ref|ZP_16791457.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1341]
gi|29343051|gb|AAO80814.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis V583]
gi|257160427|gb|EEU90387.1| helicase [Enterococcus faecalis T11]
gi|315168025|gb|EFU12042.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1341]
gi|315574247|gb|EFU86438.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309B]
gi|315581598|gb|EFU93789.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309A]
Length = 433
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LKVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|299769392|ref|YP_003731418.1| ATP-dependent RNA helicase RhlB [Acinetobacter oleivorans DR1]
gi|298699480|gb|ADI90045.1| ATP-dependent RNA helicase RhlB [Acinetobacter oleivorans DR1]
Length = 383
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 25/316 (7%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKLLTKFSDLHIVTLLGGVDFDKQKKQLDANFVDIIV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+Y + + L I + + + + + V D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPIT-VEIEPEQKTNNDVEQRVYVVAKQDKYRLLQDI-------- 245
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 --LREEPIDKVMIFANRRDQVRRLYDHLKRDGYRVGMLSGEIAQDKRLKMLEQFKQGKNN 303
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAH 543
MI D ++ + V V ++ + + +YV + R G+ SF ++DDA +
Sbjct: 304 VMIATD-VAGRGIHVDGVSHVINYTLPEQSDDYVHRIGRTGRAGSQGVSISFLSEDDAFY 362
Query: 544 AGQMIEILEQCGQVVP 559
+ EI + G+ +P
Sbjct: 363 ---LPEIEKAIGKKLP 375
>gi|334350312|ref|XP_003342337.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Monodelphis domestica]
Length = 949
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 148/342 (43%), Gaps = 49/342 (14%)
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPG---AAIDHQIT 300
+AR+E+ G P +L L ++E A +V + CK GI ++ ++ G +H
Sbjct: 615 VAREERRG-----PGMLVLTPTRELAIQVDNECKKYTYKGIKSMCIYGGDKSGPTEHIPR 669
Query: 301 GLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG------DTLSLIRQ 353
G+ + +++TP RL L ++++ ++ +V+D D L G LS IR
Sbjct: 670 GI-----DIIIATPGRLSDLQMNDLVNLNSITYVVLDEADKMLDMGFEPQIMKILSDIRP 724
Query: 354 SISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK 413
+ + D + + S +++ ++ + L L + I+ + ++EEK
Sbjct: 725 DRQTVMTSATWPDIVRHLSQKYLKDPMIVYVGTLDLT------TVNTIKQKIIVTTEEEK 778
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN 473
+VL ++ D E KV+ V + ++ S L KG + + +
Sbjct: 779 -----RVLLRSFIDSLMPE-HKVIIFVSRKLIADDISSDLSIKGIPVQS--------LHG 824
Query: 474 SVEADGR-------KRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMA 524
S E D R K+ V ++ +++ ++ +V V DF +++ Y+ +
Sbjct: 825 SREQDDRDQALEEFKKGIVKILIATDLASRGIDVLDVTHVFNFDFPQNIEEYIHRIGRTG 884
Query: 525 RHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
R SG + TK D + AG++I IL++ Q VP L +
Sbjct: 885 RAGQSGSSITLLTKGDWSVAGELINILQRANQEVPRELASMA 926
>gi|293609547|ref|ZP_06691849.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135371|ref|YP_004996021.1| ATP-dependent RNA helicase RhlB [Acinetobacter calcoaceticus
PHEA-2]
gi|292827999|gb|EFF86362.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122816|gb|ADY82339.1| ATP-dependent RNA helicase RhlB [Acinetobacter calcoaceticus
PHEA-2]
Length = 389
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 29/318 (9%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 81 FRGEPRALILAPTRELALQIESDAKFLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 140
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 141 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 200
Query: 367 CLTYTSVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVCA-SDEEKILKGIQVLDHA 424
+Y + + L + + Q + + Q V V A D+ ++L+ I
Sbjct: 201 TFSYDVLNLARQWLFEPVTVEIEPEQKTNND---VEQRVYVVAKQDKYRLLQDI------ 251
Query: 425 YGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 252 ----LREEPIDKVMIFANRRDQVRRLYDHLKKDGYRVGMLSGEIAQDKRLKMLEQFKQGK 307
Query: 484 AVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDA 541
MI D ++ + V V +F + + +YV + R G+ SF ++DDA
Sbjct: 308 HNIMIATD-VAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGSQGVSISFLSEDDA 366
Query: 542 AHAGQMIEILEQCGQVVP 559
+ + EI + G+ +P
Sbjct: 367 FY---LPEIEKAIGKKLP 381
>gi|262278447|ref|ZP_06056232.1| ATP-dependent RNA helicase rhlB [Acinetobacter calcoaceticus
RUH2202]
gi|262258798|gb|EEY77531.1| ATP-dependent RNA helicase rhlB [Acinetobacter calcoaceticus
RUH2202]
Length = 383
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 25/316 (7%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKLLTKFSDLHVVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEERQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+Y + + L I + + + + + V D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPIT-VEIEPEQKTNNDVEQRVYVVAKQDKYRLLQDI-------- 245
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 --LREEPIDKVMIFANRRDQVRRLYDHLKRDGYRVGMLSGEIAQDKRLKMLDQFKQGKNN 303
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAH 543
MI D ++ + V V ++ + + +YV + R G+ SF ++DDA +
Sbjct: 304 IMIATD-VAGRGIHVDGVSHVVNYTLPEQSDDYVHRIGRTGRAGSQGVSISFLSEDDAFY 362
Query: 544 AGQMIEILEQCGQVVP 559
+ EI + G+ +P
Sbjct: 363 ---LPEIEKAIGKKLP 375
>gi|227555119|ref|ZP_03985166.1| ATP-dependent RNA helicase [Enterococcus faecalis HH22]
gi|227175787|gb|EEI56759.1| ATP-dependent RNA helicase [Enterococcus faecalis HH22]
Length = 401
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LKVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|242051719|ref|XP_002455005.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
gi|241926980|gb|EES00125.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
Length = 488
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ A I + ++ G Q+ L+ E +++TP
Sbjct: 164 GPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGV-EIVIATP 222
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ ++ ++ V+ LV+D D + I++ +S +P T+
Sbjct: 223 GRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKE 282
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ + I+Q V + S+ +K K + +L+
Sbjct: 283 VEQLARNFLFDPYKVTIGSEELKANHAIVQHVEIL-SESQKYNKLVNLLEDIMDGS---- 337
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEADGRKRPA 484
++L + + L+ G+ + ++S K+ K P
Sbjct: 338 --RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSG------KSPI 389
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ D ++ L +Y VI DF S+++YV + R G +SFFT +A A
Sbjct: 390 MTATD---VAARGLVKY--VINYDFPGSLEDYVHRIGRTGRAGAKGTAYSFFTAANARFA 444
Query: 545 GQMIEILEQCGQVVPDALRDLCHTSP 570
++I ILE+ GQ V L + +P
Sbjct: 445 KELISILEEAGQKVSSELAAMGRGAP 470
>gi|255713670|ref|XP_002553117.1| KLTH0D09328p [Lachancea thermotolerans]
gi|238934497|emb|CAR22679.1| KLTH0D09328p [Lachancea thermotolerans CBS 6340]
Length = 551
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 20/316 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ C K+ I ++ G HQI L E +++TP
Sbjct: 184 GPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGVPRGHQIRELTRGA-EIVIATP 242
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSV 373
RL+ ++ + ++ V+ LV+D D + IR+ + +P T+
Sbjct: 243 GRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK- 301
Query: 374 PAVQNLLLG------SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
VQ L +N SL + + A I++ V SD EK + ++ L+ A D
Sbjct: 302 -EVQQLARDYLHDPIQVNVGSLELAASHNIAQIVEVV----SDMEKRDRLLKHLETASED 356
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
+ K+L + L+ G+ + ++ V + R + M
Sbjct: 357 ----KDSKILIFASTKRTCDEITRYLRQDGWPALAIHGDKAQNERDWVLQEFRTGNSPIM 412
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D + +++ VI D ++++YV + R +G SFFT+ + Q
Sbjct: 413 VATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKGMGAQ 472
Query: 547 MIEILEQCGQVVPDAL 562
+I I+ + Q +P L
Sbjct: 473 LISIMREANQQIPPEL 488
>gi|403223854|dbj|BAM41984.1| DEAD-box family RNA-dependent helicase [Theileria orientalis strain
Shintoku]
Length = 587
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 161/408 (39%), Gaps = 47/408 (11%)
Query: 176 SKFLILCLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL---ETSGSSSTIVQ 232
+ F L++IE A G ++ P+ V SW + S +D++ ET +
Sbjct: 155 TSFPKYILSSIEQA----GFKEPTPIQVQSWPVAL-----SGRDMIGIAETGSGKTLAFL 205
Query: 233 IAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHP 291
+ IV A S+ R GP +L L ++E A +++ K+ I T +
Sbjct: 206 LPAIVHINAQSLLRPGD------GPIVLVLAPTRELAEQIKDTAVTFGKSSKIKTSVAYG 259
Query: 292 GAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI 351
G QI L+ E L++ P RL+ + ++ V+ LV+D D + I
Sbjct: 260 GVPKKLQIINLKRGV-EILIACPGRLIDFLENHITNLKRVTYLVLDEADRMLDMGFEPQI 318
Query: 352 RQSISG-KP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSAC--IIQSVNV 406
R+ S +P T++F+ + LL + + +N +AC + Q+V +
Sbjct: 319 RKITSQIRPDRQTLMFSATWPKEVISLSHTLLSHEV--VHINIGSLDLTACHNVEQNVLI 376
Query: 407 CASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNC 466
++++ + G K+L L L+ G+ + C
Sbjct: 377 IEEKDKRMKLKELLKKLMDGS-------KILIFAETKKGADTLTRELRLDGWP----ALC 425
Query: 467 IVSHIKNS------VEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEI 519
I K E K P MI D S ++ + + VI DF +++YV
Sbjct: 426 IHGDKKQEERSWVLSEFKAGKHPI--MIATDVASRGLDVHDVKYVINYDFPAQIEDYVHR 483
Query: 520 LTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+ R + G ++F T D A ++++L + Q VP+ L+ L +
Sbjct: 484 IGRTGRAGMKGSSYTFLTADKFKVARDLVKLLREANQPVPEELQKLAN 531
>gi|330798075|ref|XP_003287081.1| hypothetical protein DICPUDRAFT_151154 [Dictyostelium purpureum]
gi|325082917|gb|EGC36384.1| hypothetical protein DICPUDRAFT_151154 [Dictyostelium purpureum]
Length = 565
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 162/383 (42%), Gaps = 42/383 (10%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFT 255
+ P V S G W S +D+L S GS T+ + A I + ++ ++
Sbjct: 149 EEPTPVQSLG---WPIALSGRDLLAVSKTGSGKTLS----FILPAIQHILEQPRQS-AYH 200
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L + ++E A ++ + L A I+ L+ G Q +R+ +P+ ++ TP
Sbjct: 201 GPNVLVVAPTRELACQIAEESREFLIANRINKALLYGGEPKSSQAYQIRN-QPKIIIGTP 259
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSK---GDTLSLIRQSISGKPHTVVFNDCLTYT 371
R+L ++ + VS +V+D D L + G+ + + SI +P V T+
Sbjct: 260 GRILDFYDSGSLQLKNVSYMVIDEADRLLEMGFGEDMEKLFSSI--RPDRQVLYWSATWP 317
Query: 372 -SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
V + + + L + S S + I Q+ ++ + +K+ K ++ L+ Y ++ +
Sbjct: 318 KKVSQLADKYIKDPIHLQIGSSALSANKNITQNFSIVEREADKVEKLLETLEQIYNNNEN 377
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI--------VSHIKNSVEADGRKR 482
+ L I K +S K + G C+ S+I N K
Sbjct: 378 ARTL----IFTMTKKGAETLSDFLGKNGDVRIG--CLHGDKPQQTRSNIVNRF-----KE 426
Query: 483 PAVSMIDKDHISTAELEEYEVVIVPDFII--SMKNYVEILTSMARHTVSGILHSFFTKD- 539
+ M+ I++ L+ + V +F + + + YV + AR SG HS +++
Sbjct: 427 GKLDMVIATDIASRGLDIKHITDVINFSLPPNCETYVHRIGRTARAGASGTSHSILSRES 486
Query: 540 --DAAHAGQMIEILEQCGQVVPD 560
D G +I++L+ Q +P+
Sbjct: 487 INDVELIGDLIDLLKLSDQQIPE 509
>gi|332653730|ref|ZP_08419474.1| ATP-dependent RNA helicase DeaD [Ruminococcaceae bacterium D16]
gi|332516816|gb|EGJ46421.1| ATP-dependent RNA helicase DeaD [Ruminococcaceae bacterium D16]
Length = 391
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF--GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
L L ++E A ++R + L AF G+ TV L+ G ID QIT L+ +P+ +V+TP RL
Sbjct: 84 LVLAPTRELAIQIRDELRDLCAFKEGVRTVCLYGGQPIDKQITQLKK-DPQIVVATPGRL 142
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSL 342
+ V + + + V +V+D D +
Sbjct: 143 MDHVKRRTVRLDKVQTVVLDEADRM 167
>gi|134113286|ref|XP_774667.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257311|gb|EAL20020.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 559
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ K ++ I +++ GA QI L+ E V+TP
Sbjct: 202 GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGV-EICVATP 260
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 261 GRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKE 320
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLD 422
+ L +GS++ L+ N +VA Q V VC ++ K+L ++ +
Sbjct: 321 VQRLAMDFLHDFIQVNIGSLD-LTANHNVA-------QHVEVCTDFDKRSKLLSHLEKIS 372
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
G KVL V +L L+ G+ ++ V A+ +
Sbjct: 373 QENG--------KVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSG 424
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ M+ D S ++ + VI DF + ++Y+ + R G +++FT D++
Sbjct: 425 RSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNS 484
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
A ++++IL + +P L ++
Sbjct: 485 KAARELVQILRESKADIPPELEEMA 509
>gi|134113284|ref|XP_774668.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257312|gb|EAL20021.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 546
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ K ++ I +++ GA QI L+ E V+TP
Sbjct: 189 GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGV-EICVATP 247
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 248 GRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKE 307
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLD 422
+ L +GS++ L+ N +VA Q V VC ++ K+L ++ +
Sbjct: 308 VQRLAMDFLHDFIQVNIGSLD-LTANHNVA-------QHVEVCTDFDKRSKLLSHLEKIS 359
Query: 423 HAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKR 482
G KVL V +L L+ G+ ++ V A+ +
Sbjct: 360 QENG--------KVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSG 411
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ M+ D S ++ + VI DF + ++Y+ + R G +++FT D++
Sbjct: 412 RSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNS 471
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
A ++++IL + +P L ++
Sbjct: 472 KAARELVQILRESKADIPPELEEMA 496
>gi|343085559|ref|YP_004774854.1| DEAD/DEAH box helicase [Cyclobacterium marinum DSM 745]
gi|342354093|gb|AEL26623.1| DEAD/DEAH box helicase domain protein [Cyclobacterium marinum DSM
745]
Length = 378
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 217 AKDIL--ETSGSSSTIVQIAWIVA-TAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
KD+L +GS T+ +A I+ A+K ++ P +L LV S+E A +V
Sbjct: 38 GKDLLGIAKTGSGKTVSYVAPIINHLIGGKQAKKSRQ------PKVLVLVPSRELAIQVV 91
Query: 274 SVCKPLK---AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSG 330
V K L + +++++ G +I+ Q+ GL + LV+TP RLL L S AID+S
Sbjct: 92 EVFKELSLKSPIPVKSMAVYGGVSINPQMKGLFGVD--ILVATPGRLLDLQSSAAIDLSK 149
Query: 331 VSLLVVDRLDSL 342
VS LV+D D +
Sbjct: 150 VSTLVLDEADKM 161
>gi|91206542|sp|Q4PHU9.2|DBP2_USTMA RecName: Full=ATP-dependent RNA helicase DBP2
Length = 552
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 138/321 (42%), Gaps = 25/321 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG + T +++ G QI L+ E +
Sbjct: 203 GPIALILAPTRELANQIQVECN---RFGGSSRLRTCAVYGGVPKGPQIRDLQRGA-EICI 258
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCL 368
+TP RL+ +V ++ V+ LV+D D + IR Q I T++F
Sbjct: 259 ATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMF---- 314
Query: 369 TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ T VQ L L + ++++ + + + + Q + VC E+K +++ H
Sbjct: 315 SATWPKEVQRLAGDFLNNYAQVNIGSTELAANHNVKQIIEVCTEFEKKG----KLIGHL- 369
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
+ +E KV+ +L L+ G+ ++ V A+ + +
Sbjct: 370 -ETISAENGKVIIFTSTKRVADDLTKFLRQDGWPALAIHGDKQQQERDWVLAEFKSGRSP 428
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
M+ S ++++ VI DF + ++YV + R +G +++FT +++ A
Sbjct: 429 IMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSKSA 488
Query: 545 GQMIEILEQCGQVVPDALRDL 565
++I IL + Q +P + ++
Sbjct: 489 RELIGILREAKQEIPREIEEM 509
>gi|58268226|ref|XP_571269.1| p68-like protein [Cryptococcus neoformans var. neoformans JEC21]
gi|338818050|sp|P0CQ77.1|DBP2_CRYNB RecName: Full=ATP-dependent RNA helicase DBP2-A
gi|338818051|sp|P0CQ76.1|DBP2_CRYNJ RecName: Full=ATP-dependent RNA helicase DBP2-A
gi|57227504|gb|AAW43962.1| p68-like protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 540
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 141/323 (43%), Gaps = 27/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ K ++ I +++ GA QI L+ E V+TP
Sbjct: 183 GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGV-EICVATP 241
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 242 GRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKE 301
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ L +GS++ L+ N +VA Q V VC +++ ++L H
Sbjct: 302 VQRLAMDFLHDFIQVNIGSLD-LTANHNVA-------QHVEVCTDFDKRS----KLLSHL 349
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ E KVL V +L L+ G+ ++ V A+ + +
Sbjct: 350 --EKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRS 407
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
M+ D S ++ + VI DF + ++Y+ + R G +++FT D++
Sbjct: 408 PIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKA 467
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
A ++++IL + +P L ++
Sbjct: 468 ARELVQILRESKADIPPELEEMA 490
>gi|58268224|ref|XP_571268.1| p68-like protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57227503|gb|AAW43961.1| p68-like protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 527
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 141/323 (43%), Gaps = 27/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A ++++ K ++ I +++ GA QI L+ E V+TP
Sbjct: 170 GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGV-EICVATP 228
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYT 371
RL+ ++ ++ V+ LV+D D + IR+ +S +P T++F+
Sbjct: 229 GRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKE 288
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHA 424
+ L +GS++ L+ N +VA Q V VC +++ ++L H
Sbjct: 289 VQRLAMDFLHDFIQVNIGSLD-LTANHNVA-------QHVEVCTDFDKRS----KLLSHL 336
Query: 425 YGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPA 484
+ E KVL V +L L+ G+ ++ V A+ + +
Sbjct: 337 --EKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRS 394
Query: 485 VSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
M+ D S ++ + VI DF + ++Y+ + R G +++FT D++
Sbjct: 395 PIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKA 454
Query: 544 AGQMIEILEQCGQVVPDALRDLC 566
A ++++IL + +P L ++
Sbjct: 455 ARELVQILRESKADIPPELEEMA 477
>gi|291406387|ref|XP_002719528.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 1
[Oryctolagus cuniculus]
Length = 535
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 88 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 146
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 147 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 206
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 207 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 263
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 264 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 320
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 321 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 380
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 381 LREANQAI 388
>gi|304404872|ref|ZP_07386532.1| DEAD/DEAH box helicase domain protein [Paenibacillus
curdlanolyticus YK9]
gi|304345751|gb|EFM11585.1| DEAD/DEAH box helicase domain protein [Paenibacillus
curdlanolyticus YK9]
Length = 503
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 19/143 (13%)
Query: 219 DILETSG-SSSTIVQIAWIVA--TAADSIARKEK---EGFSFTGPFL------------L 260
D LE +G T VQ I A AD AR + + +F P L +
Sbjct: 16 DALEAAGIKEPTAVQSEAIAALLAGADVTARSQTGSGKTLAFLLPMLEQLDSASSAVQAV 75
Query: 261 FLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLK 319
L +QE A ++ V + +A GI VSL GAA+ Q+ L+ +P+ +V TP R+ +
Sbjct: 76 VLAPTQELAMQITRVAQAYGEAVGIRVVSLIGGAAMSRQVENLKKHKPQLVVGTPGRIHE 135
Query: 320 LVSLKAIDVSGVSLLVVDRLDSL 342
L + + + +S V+ +V+D D +
Sbjct: 136 LAAGRKLKLSSVTKVVIDEADQV 158
>gi|398396396|ref|XP_003851656.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339471536|gb|EGP86632.1| hypothetical protein MYCGRDRAFT_73558 [Zymoseptoria tritici IPO323]
Length = 566
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 137/300 (45%), Gaps = 25/300 (8%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ ++ G D Q ++ +V+TP RL + +ID+S V+ LV+D D +
Sbjct: 250 GLKATCIYGGVNKDEQRQMIKGSS--IIVATPGRLNDFLQEGSIDLSHVNYLVLDEADRM 307
Query: 343 SKGDTLSLIRQSI-----SGKPHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVA 394
IR+ I S T++F T T P+V+ L L R+++ + +
Sbjct: 308 LDTGFEQDIRKIILSTAPSADRQTLMF----TATWPPSVRELASEFLRDPVRITIGDNAS 363
Query: 395 SQ---SACIIQSVNVCASDE-EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLV 450
+ + I+Q V V DE +K + ++VL S+ + V + K++ +
Sbjct: 364 GELRANMRIVQEVEVM--DEFDKQNRMLEVLKQYQSGKNKSDRILVFCLYKKEAT--RVE 419
Query: 451 STLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPD-- 508
T++ +G+ ++ G + +S K + K V ++ ++ L+ V +V +
Sbjct: 420 ETIRRRGFKVA-GIHGDLSQDKRTQSLAAFKSGEVPLLVATDVAARGLDIPAVKLVLNVT 478
Query: 509 FIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
F +++++YV + R +G +FFT+++ AG +I +L++ Q VP+ L T
Sbjct: 479 FPLTVEDYVHRIGRTGRAGQAGRAITFFTQNEKGLAGALINVLKKAEQPVPEELMKFGTT 538
>gi|167720206|ref|ZP_02403442.1| ATP-dependent RNA helicase [Burkholderia pseudomallei DM98]
Length = 347
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 12 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 67
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 68 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 127
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 128 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 180
>gi|167846330|ref|ZP_02471838.1| ATP-dependent RNA helicase [Burkholderia pseudomallei B7210]
Length = 347
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 4 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 59
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 60 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 119
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 120 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 172
>gi|340721213|ref|XP_003399019.1| PREDICTED: ATP-dependent RNA helicase p62-like [Bombus terrestris]
Length = 533
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 138/322 (42%), Gaps = 25/322 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V FG + + + GA +Q L E ++TP
Sbjct: 187 GPIALVLAPTRELAQQIQKVTY---NFGYVRSTCIFGGAPKGNQARDLEHGV-EICIATP 242
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTSV 373
RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 243 GRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPK- 301
Query: 374 PAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
V+NL L +L++ S + I+Q V+VC + EK K +L +
Sbjct: 302 -EVRNLAEEYLVDYTQLNIGSLTLSANHNILQIVDVC-EEHEKQAKLQDLLQEI--SNVS 357
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD------GRKRPA 484
E K + V K +++ T++ G+ + CI K+ +E D R + +
Sbjct: 358 PEGGKTIIFVETKKKVESITKTIRRCGWP----AVCIHGD-KSQLERDFVLTEFRRNKDS 412
Query: 485 VSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
+ + ++++ + VI D+ S ++Y+ + R SG ++FFT ++ A
Sbjct: 413 ILVATDVAARGLDVDDVKYVINFDYPTSSEDYIHRIGRTGRSNNSGTSYAFFTPQNSRQA 472
Query: 545 GQMIEILEQCGQVVPDALRDLC 566
+I +L++ QV+ L +L
Sbjct: 473 KGLINVLKEAKQVINPKLMELA 494
>gi|397497647|ref|XP_003819617.1| PREDICTED: probable ATP-dependent RNA helicase DDX53 [Pan paniscus]
Length = 631
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 160/369 (43%), Gaps = 41/369 (11%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQI-AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W D++E +G+ T+ + + + I+R+++ GP +L L +++
Sbjct: 253 WPIILQGIDLIEVAQTGTGKTLSYLMPGFIHLDSQPISREQR-----NGPGMLVLTPTRK 307
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A V + C G+ ++ ++ G + QI + S + +++TP RL L +++
Sbjct: 308 LALHVEAECSKYSYKGLKSICVYGGRNRNGQIEDI-SKGVDIIIATPGRLNDLQMNNSVN 366
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLI----------RQSI--SGKPHTVVFNDCLTYTSVPA 375
+ ++ LV+D D + + I RQ++ S V L+Y P
Sbjct: 367 LRSITYLVIDEADKMLDMEFEPQIMKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPM 426
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ + +G++N +++N + Q++ V E++ L V + + D K
Sbjct: 427 M--VYVGNLNLVAVN--------TLKQNIIVTTEKEKRALTQEFVENMSPND-------K 469
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKRPAVSMIDKDHIS 494
V+ V + +L S +G S S N S + +VE D + +I D +S
Sbjct: 470 VIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDRERAVE-DFKSGNIKILITTDIVS 528
Query: 495 TA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQ 553
+L + V DF ++ YV + + R +G + T+ D+ AG++I+IL++
Sbjct: 529 RGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDR 588
Query: 554 CGQVVPDAL 562
Q VP+ L
Sbjct: 589 ANQSVPEDL 597
>gi|397480288|ref|XP_003811418.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 3 [Pan
paniscus]
gi|402900784|ref|XP_003913347.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 3
[Papio anubis]
gi|403303810|ref|XP_003942515.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 3
[Saimiri boliviensis boliviensis]
gi|410981522|ref|XP_003997117.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Felis catus]
gi|426347225|ref|XP_004041258.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 3
[Gorilla gorilla gorilla]
gi|441661859|ref|XP_004091549.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 3
[Nomascus leucogenys]
gi|194386232|dbj|BAG59680.1| unnamed protein product [Homo sapiens]
gi|296476160|tpg|DAA18275.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 1 [Bos
taurus]
Length = 535
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 88 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 146
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 147 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 206
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 207 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 263
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 264 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 320
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 321 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 380
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 381 LREANQAI 388
>gi|296201836|ref|XP_002748197.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 4
[Callithrix jacchus]
Length = 535
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 88 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 146
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 147 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 206
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 207 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 263
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 264 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 320
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 321 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 380
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 381 LREANQAI 388
>gi|218190304|gb|EEC72731.1| hypothetical protein OsI_06346 [Oryza sativa Indica Group]
Length = 1382
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 48/332 (14%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A++++ K ++ + L+ G + Q+ L + +V+TP
Sbjct: 675 GPTVLVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGA-DIVVATP 733
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYT 371
RL ++ ++ I + VS LV+D D + IR+ + P T+++
Sbjct: 734 GRLNDILEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKE 793
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVLDH 423
+LL +GSI+ L N+S I Q V V D+++ L+
Sbjct: 794 VTKIAGDLLKDPVQVNIGSIDELVANKS-------ITQYVEVVPPLDKQRRLE------- 839
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI---KNSVEADG 479
++L + SK ST K C + G + + I K+ E D
Sbjct: 840 -----------QILRAQERGSKVIIFCSTKKMCDQLARDIGRSFGAASIHGDKSQAERDN 888
Query: 480 -----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
R A ++ D + ++++ VVI DF +++YV + R +G+ +
Sbjct: 889 VLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSY 948
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
+FF++ D +AG ++++LE Q VP L+++
Sbjct: 949 TFFSEQDWKYAGDLVKVLEGANQHVPPELQEM 980
>gi|256962563|ref|ZP_05566734.1| helicase [Enterococcus faecalis HIP11704]
gi|307272025|ref|ZP_07553291.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0855]
gi|256953059|gb|EEU69691.1| helicase [Enterococcus faecalis HIP11704]
gi|306511320|gb|EFM80324.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0855]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|229546856|ref|ZP_04435581.1| ATP-dependent RNA helicase [Enterococcus faecalis TX1322]
gi|256761767|ref|ZP_05502347.1| helicase [Enterococcus faecalis T3]
gi|256852662|ref|ZP_05558033.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis T8]
gi|307290029|ref|ZP_07569953.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0411]
gi|312901032|ref|ZP_07760323.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0470]
gi|422685587|ref|ZP_16743803.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4000]
gi|422699568|ref|ZP_16757432.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1342]
gi|229308021|gb|EEN74008.1| ATP-dependent RNA helicase [Enterococcus faecalis TX1322]
gi|256683018|gb|EEU22713.1| helicase [Enterococcus faecalis T3]
gi|256712007|gb|EEU27044.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis T8]
gi|306498871|gb|EFM68365.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0411]
gi|311291858|gb|EFQ70414.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0470]
gi|315029698|gb|EFT41630.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4000]
gi|315171946|gb|EFU15963.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1342]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|300859667|ref|ZP_07105755.1| DEAD/DEAH box helicase [Enterococcus faecalis TUSoD Ef11]
gi|428766517|ref|YP_007152628.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis str. Symbioflor 1]
gi|300850485|gb|EFK78234.1| DEAD/DEAH box helicase [Enterococcus faecalis TUSoD Ef11]
gi|427184690|emb|CCO71914.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis str. Symbioflor 1]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|410900858|ref|XP_003963913.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Takifugu
rubripes]
Length = 607
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 25/317 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + CK +V ++ G QI + + +++TP
Sbjct: 269 GPGMLVLTPTRELALQVDAECKKYSYKDYKSVCVYGGGDRKAQIHKVERGV-DIVIATPG 327
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L K I++ ++ LV+D D L G +++ + +P +T + P
Sbjct: 328 RLHDLQMNKLINLRSITYLVLDEADRMLDLGFEPQIMKILLDVRPDR---QTVMTSATWP 384
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVN---VCASDEEKILKGIQVLDHAYGDHFHS 431
A + S + + V S + SV + S EEK + L +
Sbjct: 385 ASVRRMATSYLKDPMMVYVGSLDLTAVSSVQQKILIVSAEEKKPYLLNFLKNM------- 437
Query: 432 EPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI-VSHIKNSVEADGR--KRPAVSM 487
EP KVL VG+ +L S L G S+ C+ H + E + K V +
Sbjct: 438 EPQDKVLIFVGRKLTADDLSSDLCLYGESV----QCLHGGHEQCDREEALKDFKASKVRI 493
Query: 488 IDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG 545
+ +++ L+ ++ V DF +++ YV + R SG + T+DD A
Sbjct: 494 LVATDLASRGLDVLDITHVFNYDFPKNIEEYVHRVGRTGRAGRSGAAVTLVTRDDWRMAP 553
Query: 546 QMIEILEQCGQVVPDAL 562
++I ILE+ GQ VP+ L
Sbjct: 554 RLIPILERSGQDVPEEL 570
>gi|255974078|ref|ZP_05424664.1| helicase [Enterococcus faecalis T2]
gi|307278940|ref|ZP_07559999.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0860]
gi|255966950|gb|EET97572.1| helicase [Enterococcus faecalis T2]
gi|306504327|gb|EFM73538.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0860]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|424757098|ref|ZP_18184862.1| DEAD/DEAH box helicase [Enterococcus faecalis R508]
gi|402407626|gb|EJV40143.1| DEAD/DEAH box helicase [Enterococcus faecalis R508]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|424679097|ref|ZP_18115928.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV103]
gi|424682311|ref|ZP_18119086.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV116]
gi|424684046|ref|ZP_18120774.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV129]
gi|424686887|ref|ZP_18123549.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV25]
gi|424690043|ref|ZP_18126579.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV31]
gi|424692297|ref|ZP_18128800.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV37]
gi|424698035|ref|ZP_18134343.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV41]
gi|424700562|ref|ZP_18136746.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV62]
gi|424705590|ref|ZP_18141620.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV63]
gi|424712412|ref|ZP_18144595.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV65]
gi|424716276|ref|ZP_18145589.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV68]
gi|424721623|ref|ZP_18150705.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV72]
gi|424723714|ref|ZP_18152669.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV73]
gi|424729454|ref|ZP_18158055.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV81]
gi|424735071|ref|ZP_18163544.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV85]
gi|424751832|ref|ZP_18179853.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV93]
gi|402349361|gb|EJU84312.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV116]
gi|402349378|gb|EJU84328.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV103]
gi|402362982|gb|EJU97492.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV129]
gi|402365177|gb|EJU99603.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV31]
gi|402366594|gb|EJV00964.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV25]
gi|402373653|gb|EJV07724.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV62]
gi|402373944|gb|EJV07992.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV41]
gi|402378688|gb|EJV12526.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV37]
gi|402379014|gb|EJV12835.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV63]
gi|402380906|gb|EJV14645.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV65]
gi|402388469|gb|EJV21908.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV68]
gi|402390790|gb|EJV24111.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV72]
gi|402393908|gb|EJV27114.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV81]
gi|402397423|gb|EJV30441.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV73]
gi|402404688|gb|EJV37304.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV85]
gi|402405328|gb|EJV37925.1| DEAD/DEAH box helicase [Enterococcus faecalis ERV93]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|322696830|gb|EFY88617.1| ATP-dependent RNA helicase dbp3 [Metarhizium acridum CQMa 102]
Length = 591
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 20/291 (6%)
Query: 287 VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGD 346
V L+ G++ D Q + + + +V+TP RL +S +D+S V+D D +
Sbjct: 272 VCLYGGSSKDEQ-RAMVNRGADIIVATPGRLKDFMSDGTVDLSDCQFAVLDEADRMLDKG 330
Query: 347 TLSLIRQSISG-----KPHTVVFN-------DCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
I+Q + + T++F L T + + +GS + + N SV
Sbjct: 331 FEDDIKQILGACLARERRQTLMFTATWPQSVQALASTFMVDPVKITIGSGGKETENGSVE 390
Query: 395 SQSAC-IIQSVNVCASDEEKILKGIQVL-DHAYGDHFHSEPLKVLYIVGKDSKFQNLVST 452
Q+ I Q V V ++K + +Q+L H G + L + ++ +N +S
Sbjct: 391 LQANTRITQKVEVV-DPKDKEFRLLQILKQHQQGKQKNDRILVFCLYKKEATRVENFLSR 449
Query: 453 LKCKGYSISTGSNCIVSHIKN-SVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFII 511
KG + + + S+EA + V + ++ E ++VI F +
Sbjct: 450 ---KGIRVGGIHGDLKQEQRTRSLEAFKTGQTPVLVATDVAARGLDIPEVKLVINVTFPL 506
Query: 512 SMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
++++YV + R +G H+ FT D AH+G ++ IL+ Q VPD L
Sbjct: 507 TIEDYVHRIGRTGRAGNTGEAHTLFTVQDKAHSGSLVNILKGANQPVPDEL 557
>gi|422730000|ref|ZP_16786395.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0012]
gi|315149531|gb|EFT93547.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0012]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|311244125|ref|XP_001925444.2| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Sus scrofa]
Length = 643
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 144/331 (43%), Gaps = 43/331 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ +V ++ G D QI L + +++TP
Sbjct: 310 GPGMLVLTPTRELALQVEAECSKYSYKGLKSVCVYGGGDRDGQIKDLLKGV-DIIIATPG 368
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP--HTVVFNDCLTYTS 372
RL L + + +S LV+D D L G +++ + +P TV+ + Y
Sbjct: 369 RLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKILLDIRPDRQTVMTSATWPYAV 428
Query: 373 VPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
Q+ L +G+++ +++ + + Q++ V DE++ IQ +
Sbjct: 429 RRLAQSYLKEPMIVYVGTLDLVAV--------STVKQNIIVTTEDEKR--SHIQTFIESM 478
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP-- 483
S KV+ V + + +L S L + S+ + + + E R+R
Sbjct: 479 -----SPKDKVIIFVSRKAVADHLSSDLGIRHISVES--------LHGNREQGDRERALK 525
Query: 484 -----AVSMIDKDHISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFF 536
V ++ +++ L+ ++V V DF +++ YV + R +G+ +
Sbjct: 526 NFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLI 585
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
T+ D AG++I ILE+ Q +P+ L ++
Sbjct: 586 TRSDWKIAGELIHILERANQSIPEDLVEMAE 616
>gi|167911540|ref|ZP_02498631.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 112]
Length = 337
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 5 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 60
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 61 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 120
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 121 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 173
>gi|257083920|ref|ZP_05578281.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis Fly1]
gi|256991950|gb|EEU79252.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis Fly1]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVSRTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|227517933|ref|ZP_03947982.1| ATP-dependent RNA helicase [Enterococcus faecalis TX0104]
gi|227074621|gb|EEI12584.1| ATP-dependent RNA helicase [Enterococcus faecalis TX0104]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|257415628|ref|ZP_05592622.1| helicase [Enterococcus faecalis ARO1/DG]
gi|422730871|ref|ZP_16787252.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0645]
gi|422739835|ref|ZP_16795001.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2141]
gi|257157456|gb|EEU87416.1| helicase [Enterococcus faecalis ARO1/DG]
gi|295113817|emb|CBL32454.1| Superfamily II DNA and RNA helicases [Enterococcus sp. 7L76]
gi|315144394|gb|EFT88410.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2141]
gi|315162926|gb|EFU06943.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0645]
Length = 433
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|257081262|ref|ZP_05575623.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis E1Sol]
gi|256989292|gb|EEU76594.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis E1Sol]
Length = 433
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|421513301|ref|ZP_15960078.1| ATP-dependent RNA helicase YfmL [Enterococcus faecalis ATCC 29212]
gi|401673555|gb|EJS79936.1| ATP-dependent RNA helicase YfmL [Enterococcus faecalis ATCC 29212]
Length = 433
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVF 364
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVF 177
>gi|229548950|ref|ZP_04437675.1| ATP-dependent RNA helicase [Enterococcus faecalis ATCC 29200]
gi|255971463|ref|ZP_05422049.1| helicase [Enterococcus faecalis T1]
gi|256617933|ref|ZP_05474779.1| helicase [Enterococcus faecalis ATCC 4200]
gi|256960194|ref|ZP_05564365.1| helicase [Enterococcus faecalis Merz96]
gi|257089418|ref|ZP_05583779.1| helicase [Enterococcus faecalis CH188]
gi|257421258|ref|ZP_05598248.1| ATP-dependent RNA helicase [Enterococcus faecalis X98]
gi|293382558|ref|ZP_06628492.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis R712]
gi|293387841|ref|ZP_06632380.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis S613]
gi|312904571|ref|ZP_07763729.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0635]
gi|312906839|ref|ZP_07765836.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 512]
gi|312952719|ref|ZP_07771581.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0102]
gi|312978906|ref|ZP_07790632.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 516]
gi|422689634|ref|ZP_16747738.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0630]
gi|422692299|ref|ZP_16750321.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0031]
gi|422705619|ref|ZP_16763415.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0043]
gi|422727533|ref|ZP_16783974.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0312]
gi|229305971|gb|EEN71967.1| ATP-dependent RNA helicase [Enterococcus faecalis ATCC 29200]
gi|255962481|gb|EET94957.1| helicase [Enterococcus faecalis T1]
gi|256597460|gb|EEU16636.1| helicase [Enterococcus faecalis ATCC 4200]
gi|256950690|gb|EEU67322.1| helicase [Enterococcus faecalis Merz96]
gi|256998230|gb|EEU84750.1| helicase [Enterococcus faecalis CH188]
gi|257163082|gb|EEU93042.1| ATP-dependent RNA helicase [Enterococcus faecalis X98]
gi|291080106|gb|EFE17470.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis R712]
gi|291082688|gb|EFE19651.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis S613]
gi|310627093|gb|EFQ10376.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 512]
gi|310629235|gb|EFQ12518.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0102]
gi|310632084|gb|EFQ15367.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0635]
gi|311288343|gb|EFQ66899.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 516]
gi|315153085|gb|EFT97101.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0031]
gi|315156858|gb|EFU00875.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0043]
gi|315157644|gb|EFU01661.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0312]
gi|315577375|gb|EFU89566.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0630]
Length = 433
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|83719456|ref|YP_442523.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
gi|83653281|gb|ABC37344.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
Length = 482
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 107 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 162
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 163 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPASRQTMLFSATL 222
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 223 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 275
>gi|90075448|dbj|BAE87404.1| unnamed protein product [Macaca fascicularis]
Length = 566
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|307289389|ref|ZP_07569343.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0109]
gi|422703294|ref|ZP_16761116.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1302]
gi|306499644|gb|EFM69007.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0109]
gi|315165126|gb|EFU09143.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1302]
Length = 433
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVF 364
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVF 177
>gi|297612409|ref|NP_001068490.2| Os11g0689400 [Oryza sativa Japonica Group]
gi|77552592|gb|ABA95389.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|255680379|dbj|BAF28853.2| Os11g0689400 [Oryza sativa Japonica Group]
gi|393794480|dbj|BAM28951.1| putative DEAD box RNA helicase [Oryza sativa Japonica Group]
Length = 1398
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 48/332 (14%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A++++ K ++ + L+ G + Q+ L + +V+TP
Sbjct: 676 GPTVLVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGA-DIVVATP 734
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYT 371
RL ++ ++ I + VS LV+D D + IR+ + P T+++
Sbjct: 735 GRLNDILEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKE 794
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVLDH 423
+LL +GSI+ L N+S I Q V V D+++ L+
Sbjct: 795 VTKIAGDLLKDPVQVNIGSIDELVANKS-------ITQYVEVVPPLDKQRRLE------- 840
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI---KNSVEADG 479
++L + SK ST K C + G + + I K+ E D
Sbjct: 841 -----------QILRAQERGSKVIIFCSTKKMCDQLARDIGRSFGAASIHGDKSQAERDN 889
Query: 480 -----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
R A ++ D + ++++ VVI DF +++YV + R +G+ +
Sbjct: 890 VLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSY 949
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDL 565
+FF++ D +AG ++++LE Q VP L+++
Sbjct: 950 TFFSEQDWKYAGDLVKVLEGANQHVPPELQEM 981
>gi|333395779|ref|ZP_08477596.1| putative ATP-dependent RNA helicase [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
Length = 419
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
LL L +QE A + R+ +P +A G+ ++ GA I QI L+ +PE LV+TP RL
Sbjct: 65 LLILAPAQELAMQERTAIQPFAQAAGLKIQAVAGGANIRRQIERLKQ-KPEVLVATPGRL 123
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQ 377
L+L+ + + + + +V+D D L ++ + R + P + T +P +
Sbjct: 124 LELIDQRKVKMHKLQTIVIDEADKLLTDESREMTRDVVRRAPGETQLA-FFSATKIPVLD 182
Query: 378 NL 379
L
Sbjct: 183 EL 184
>gi|420145033|ref|ZP_14652510.1| ATP-dependent RNA helicase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403360|gb|EJN56612.1| ATP-dependent RNA helicase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 419
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
LL L +QE A + R+ +P +A G+ ++ GA I QI L+ +PE LV+TP RL
Sbjct: 65 LLILAPAQELAMQERTAIQPFAQAAGLKIQAVAGGANIRRQIERLKQ-KPEVLVATPGRL 123
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQ 377
L+L+ + + + + +V+D D L ++ + R + P + T +P +
Sbjct: 124 LELIDQRKVKMHKLQTIVIDEADKLLTDESREMTRDVVRRAPGETQLA-FFSATKIPVLD 182
Query: 378 NL 379
L
Sbjct: 183 EL 184
>gi|307275492|ref|ZP_07556634.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2134]
gi|306507880|gb|EFM77008.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2134]
Length = 430
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 259 LLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+ TP
Sbjct: 70 LLIIAPSQELAMQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLIGTP 125
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVF 364
R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 126 GRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVF 177
>gi|148229654|ref|NP_001084230.1| DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Xenopus laevis]
gi|8163810|gb|AAF73861.1|AF218580_1 p68 RNA helicase [Xenopus laevis]
Length = 608
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 138/314 (43%), Gaps = 13/314 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP LL L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 165 GPILLVLAPTRELAQQVQQVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + +++ + LV+D D + IR+ I T++++
Sbjct: 224 GRLIDFLEAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L ++ +++ S + I+Q V+VC +D EK K +++++ + +
Sbjct: 284 VRQLAEDFLRDYVH-INIGALELSANHNILQIVDVC-NDGEKDDKLVRLMEEIMSEKEN- 340
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + +L L+ G+ ++ V + + + +I D
Sbjct: 341 ---KTIVFVETKRRCDDLTRRLRRDGWPAMGIHGDKSQQERDWVLNEFKHGKSPILIATD 397
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR + +G ++FFT + +I +
Sbjct: 398 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVNDLISV 457
Query: 551 LEQCGQVV-PDALR 563
L + Q + P+ L+
Sbjct: 458 LREANQAINPNLLQ 471
>gi|332860426|ref|XP_003317435.1| PREDICTED: probable ATP-dependent RNA helicase DDX53 [Pan
troglodytes]
Length = 631
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 160/369 (43%), Gaps = 41/369 (11%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQI-AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQE 267
W D++E +G+ T+ + + + I+R+++ GP +L L +++
Sbjct: 253 WPIILQGIDLIEVAQTGTGKTLSYLMPGFIHLDSQPISREQR-----NGPGMLVLTPTRK 307
Query: 268 KAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A V + C G+ ++ ++ G + QI + S + +++TP RL L +++
Sbjct: 308 LALHVEAECSKYSYKGLKSICVYGGRNRNGQIEDI-SKGVDIIIATPGRLNDLQMNNSVN 366
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLI----------RQSI--SGKPHTVVFNDCLTYTSVPA 375
+ ++ LV+D D + + I RQ++ S V L+Y P
Sbjct: 367 LRSITYLVIDEADKMLDMEFEPQIMKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPM 426
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK 435
+ + +G++N +++N + Q++ V E++ L V + + D K
Sbjct: 427 M--VYVGNLNLVAVN--------TLKQNIIVTTEKEKQALTQEFVENMSPND-------K 469
Query: 436 VLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKRPAVSMIDKDHIS 494
V+ V + +L S +G S S N S + +VE D + +I D +S
Sbjct: 470 VIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDRERAVE-DFKSGNIKILITTDIVS 528
Query: 495 TA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQ 553
+L + V DF ++ YV + + R +G + T+ D+ AG++I+IL++
Sbjct: 529 QGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDR 588
Query: 554 CGQVVPDAL 562
Q VP+ L
Sbjct: 589 ANQSVPEDL 597
>gi|76809038|ref|YP_334004.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1710b]
gi|76578491|gb|ABA47966.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1710b]
Length = 529
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 151 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 206
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 207 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 266
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 267 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 319
>gi|449495488|ref|XP_004159856.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
40-like [Cucumis sativus]
Length = 1142
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++++ VVI DF +++YV + R +G+ ++FF++ D A +I++LE GQ
Sbjct: 804 DIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKFASDLIKVLEGAGQ 863
Query: 557 VVPDALRDLC 566
VP LR++
Sbjct: 864 PVPPELRNMA 873
>gi|257138731|ref|ZP_05586993.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
Length = 515
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 140 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 195
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 196 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPASRQTMLFSATL 255
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 256 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 308
>gi|47086809|ref|NP_997777.1| probable ATP-dependent RNA helicase DDX5 [Danio rerio]
gi|37362204|gb|AAQ91230.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Danio rerio]
Length = 518
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V KA I + ++ GA QI L E ++TP
Sbjct: 169 GPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPQGPQIRDLERGV-EICIATP 227
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 228 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 287
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +D EK K I++L+ + +
Sbjct: 288 VRQLAEDFLKEYIQINVGALQLSANHNILQIVDVC-NDGEKEDKLIRLLEEIMSEKEN-- 344
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 345 --KTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDV 402
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ + ++Y+ + AR +G ++FFT ++ A ++ +L
Sbjct: 403 ASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVL 462
Query: 552 EQCGQVV 558
+ Q +
Sbjct: 463 REAHQAI 469
>gi|393905962|gb|EJD74119.1| DEAD box polypeptide 17, variant 1 [Loa loa]
Length = 553
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 150/370 (40%), Gaps = 33/370 (8%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T I + A R ++ P +L L+ ++E
Sbjct: 159 WPIALSGRDMVSIAKTGSGKTFAFILPAIVHTAGQPPRGHQKS-----PSVLVLLPTREL 213
Query: 269 AAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A +V V K +A + L GA Q L + +++TP RL+ + + D
Sbjct: 214 AQQVEEVAKDYCRATELSITCLFGGAPKAAQARDLERGV-DIIIATPGRLMDFLEVGKTD 272
Query: 328 VSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTYTSVPAVQNLLLGSI 384
+ + LV+D D + IR+ +S +P T++F+ V + L
Sbjct: 273 LRRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWP-KDVRKLAMDFLADA 331
Query: 385 NRLSLNQSVASQSACIIQSVNVC-ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKD 443
L++ S + I Q V + S++++ L I D + E K + V
Sbjct: 332 AHLNVGSLELSANHNITQIVEIIDESNKQQRLMAI------LSDIMNKEDCKTIIFVETK 385
Query: 444 SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR-------KRPAVSMIDKDHISTA 496
K +L ++ G+ + CI K E D K P + D
Sbjct: 386 RKADDLTRWMRRDGWP----ALCIHGD-KGQSERDWALSEFRSGKTPILLATDV-AARGL 439
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++++ + VI D+ + ++YV + R +GI ++FFT +A A +I++LE+ Q
Sbjct: 440 DVDDIKYVINFDYSNNSEDYVHRIGRTGRRDKTGIAYTFFTYANAPKAKDLIKVLEEANQ 499
Query: 557 VVPDALRDLC 566
+P L +
Sbjct: 500 SIPPELHQMA 509
>gi|60501849|gb|AAX22124.1| DEAD-box RNA-dependent helicase p68 [Carassius auratus]
Length = 611
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 133/307 (43%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V KA + + ++ GA QI L E ++TP
Sbjct: 169 GPICLVLAPTRELAQQVQQVAAEYGKASRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 227
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + + ++ + LV+D D + IR+ + +P T+
Sbjct: 228 GRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKE 287
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +D EK K +++L+ + +
Sbjct: 288 VRQLAEDFLKDYVQINVGALQLSANHNILQIVDVC-NDGEKEDKLMRLLEEIMSEKEN-- 344
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L +++ G+ ++ V + + A +I D
Sbjct: 345 --KTIIFVETKRRCDDLTRSMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDV 402
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ + ++Y+ + AR +G ++FFT ++ A ++ +L
Sbjct: 403 ASRGLDVEDIKFVINYDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVL 462
Query: 552 EQCGQVV 558
+ Q +
Sbjct: 463 REANQAI 469
>gi|449433363|ref|XP_004134467.1| PREDICTED: uncharacterized protein LOC101206109 [Cucumis sativus]
Length = 1152
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 48/333 (14%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ K ++ + L+ GA Q+ L + +V+TP
Sbjct: 577 GPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGA-DIVVATP 635
Query: 315 ERLLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
RL ++ +K I+ +SLLV+ DR+ + + I I + T+++
Sbjct: 636 GRLNDILEMKMINFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKE 695
Query: 372 SVPAVQNLL-------LGSINRLSLNQSVASQSACIIQSVNVCAS-DEEKILKGIQVLDH 423
+LL +GS++ L+ N+ I Q V V ++++ L+
Sbjct: 696 VRKIANDLLVNSVQVNIGSVDELAANK-------AITQYVEVVPQMEKQRRLE------- 741
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLK-CKGYSISTGSNCIVSHI---KNSVEADG 479
++L + SK ST + C + + G + I K+ E D
Sbjct: 742 -----------QILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDW 790
Query: 480 -----RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILH 533
R + ++ D + ++++ VVI DF +++YV + R +G+ +
Sbjct: 791 VLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGVAY 850
Query: 534 SFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+FF++ D A +I++LE GQ VP LR++
Sbjct: 851 TFFSEQDWKFASDLIKVLEGAGQPVPPELRNMA 883
>gi|401887107|gb|EJT51112.1| hypothetical protein A1Q1_07707 [Trichosporon asahii var. asahii
CBS 2479]
gi|406695163|gb|EKC98476.1| hypothetical protein A1Q2_07213 [Trichosporon asahii var. asahii
CBS 8904]
Length = 572
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 18/313 (5%)
Query: 259 LLFLVSSQEKAAK-VRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
+L L ++E A + ++ K K I VSL G QI +++ +V TP R
Sbjct: 229 MLVLAPTRELAQQSFDTLVKLGKQLNIEAVSLFGGVPKGEQIAKIKAPNTRIVVGTPGRT 288
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSIS------GKPHTVVFNDCLTYT 371
L L +D+SG+ LV+D D + + IR+ I+ G TV+F+
Sbjct: 289 LDLADSGDLDLSGIKYLVLDEADRMLDAGFENDIRRIIAHCPKHDGGRQTVMFSATWP-E 347
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
SV + + L ++++ S + I Q V V + +K + L +H S
Sbjct: 348 SVRRLASSFLTEPVKVTVGSDELSANKRIEQVVEVLDNPRDKDGR----LTWHLRNHLKS 403
Query: 432 EPLKVLYIVGKDSK-FQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
P + + G K Q L T++ GY + + + + D K +V+++
Sbjct: 404 NPGARVLVFGLYKKEAQRLEYTIRRAGYKVGALHGDMNQNDRFKA-LDAFKDGSVNVLVA 462
Query: 491 DHISTAELEEYEVVIVPD--FIISMKNYVEILTSMARHTVSGILHSFFTKD--DAAHAGQ 546
++ L+ +V +V + F ++ +++V R +G +FFT + + + AG+
Sbjct: 463 TDVAARGLDIPDVALVINVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGENHERSLAGE 522
Query: 547 MIEILEQCGQVVP 559
+ +L G VP
Sbjct: 523 FMRVLRDAGAEVP 535
>gi|302696669|ref|XP_003038013.1| hypothetical protein SCHCODRAFT_43190 [Schizophyllum commune H4-8]
gi|300111710|gb|EFJ03111.1| hypothetical protein SCHCODRAFT_43190, partial [Schizophyllum
commune H4-8]
Length = 674
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ CKP LK + V + G+ I QI L+ E +V TP
Sbjct: 153 GPIALVMTPTRELATQIHRECKPFLKVLNLRAVCAYGGSPIKDQIADLKKGA-EIIVCTP 211
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSL----SKGDTLSLIRQSISGKPHTVVFNDC 367
R++ L+ S + ++ V+ +V+D D + + + +I +I TV+F+
Sbjct: 212 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKII-NNIRPDRQTVLFS-- 268
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ P + L I + L +V +S A I+ + ++ K ++ +++L
Sbjct: 269 ---ATFPKQMDSLARKILKKPLEITVGGRSVVAAEIEQIVEVREEDTKFMRLLEIL---- 321
Query: 426 GDHFHSEP-LKVLYIVGKDSKFQNLVSTLKCKGY 458
G ++ +P + L V + NL+ L KGY
Sbjct: 322 GQMYNEDPDCRTLIFVDRHEAADNLLRELMRKGY 355
>gi|291406389|ref|XP_002719529.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 2
[Oryctolagus cuniculus]
Length = 544
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 97 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 155
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 156 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 215
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 216 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 272
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 273 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 329
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 330 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 389
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 390 LREANQAI 397
>gi|170576579|ref|XP_001893687.1| RNA-dependent helicase [Brugia malayi]
gi|158600176|gb|EDP37484.1| RNA-dependent helicase, putative [Brugia malayi]
Length = 553
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 157/385 (40%), Gaps = 54/385 (14%)
Query: 219 DILETSGSSSTIVQ-IAWIVATAADSIARKEKEG----FSFT-----------------G 256
D+L + T++Q I+W +A + + K G F+F
Sbjct: 142 DMLFANFQKPTVIQSISWPIALSGRDMVSIAKTGSGKTFAFILPAIVHTINQPPRGHQKS 201
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEP--EFLVST 313
P +L L+ ++E A +V V K +A + L GA + T R E + +++T
Sbjct: 202 PSVLVLLPTRELAQQVEEVAKDYCRATDLSITCLFGGAP---KATQARDLERGVDIIIAT 258
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLTY 370
P RL+ + + D+ + LV+D D + IR+ +S +P T++F+
Sbjct: 259 PGRLMDFLEIGKTDLRRCTYLVLDEADRMLDMGFEPQIRKVVSQIRPDRQTLMFSATWPK 318
Query: 371 TSVPAVQNLLLGS--INRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ L + +N SL S I++ ++ S++++ L I D
Sbjct: 319 DVRKLAMDFLTDAAHLNVGSLELSANHNITQIVEIID--ESNKQQRLMAI------LSDI 370
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGR-------K 481
+ E K + V K +L ++ G+ + CI K E D K
Sbjct: 371 MNKEDCKTIIFVETKRKADDLTRWMRRDGWP----ALCIHGD-KGQSERDWALSEFRSGK 425
Query: 482 RPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
P + D ++++ + VI D+ + ++YV + R +G+ ++FFT +A
Sbjct: 426 TPILLATDV-AARGLDVDDIKYVINFDYSNNSEDYVHRIGRTGRRDKTGVAYTFFTYANA 484
Query: 542 AHAGQMIEILEQCGQVVPDALRDLC 566
A +I++LE+ Q +P L +
Sbjct: 485 PKAKDLIKVLEEANQSIPPELHQMA 509
>gi|52430509|gb|AAH82849.1| DDX5 protein [Xenopus laevis]
Length = 608
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 136/317 (42%), Gaps = 12/317 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP LL L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 165 GPILLVLAPTRELAQQVQQVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGV-EICIATP 223
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + +++ + LV+D D + IR+ I T++++
Sbjct: 224 GRLIDFLEAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L ++ +++ S + I+Q V+VC +D EK K +++++ + +
Sbjct: 284 VRQLAEDFLRDYVH-INIGALELSANHNILQIVDVC-NDGEKDDKLVRLMEEIMSEKEN- 340
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + +L L+ G+ ++ V + + + +I D
Sbjct: 341 ---KTIVFVETKRRCDDLTRRLRRDGWPAMGIHGDKSQQERDWVLNEFKHGKSPILIATD 397
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR + +G ++FFT + +I +
Sbjct: 398 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVNDLISV 457
Query: 551 LEQCGQVVPDALRDLCH 567
L + Q + L L
Sbjct: 458 LREANQAINPKLLQLVE 474
>gi|395326138|gb|EJF58551.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 591
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 166/389 (42%), Gaps = 40/389 (10%)
Query: 193 DGVEQDNPLFVNSWGIEF-WKCYSSAKDILETSGSSSTIVQIAWIVATAADSIARKEKEG 251
DG ++ P+ SW W+ I ET + + + A I +K K G
Sbjct: 177 DGFKEPTPIQACSWPPALEWRDVVG---IAETGSGKTLAFGLPALARLLASPIDKKSK-G 232
Query: 252 FSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPE-- 308
+ + +L + ++E A + L + FGI +V++ G QI L++ +
Sbjct: 233 TTVS---VLVVAPTRELAIQTHETLDKLGEPFGIASVAVFGGVDKGPQIKALKNMNKDKG 289
Query: 309 ------FLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISG- 357
+V TP R+L LV+ A D+S VS LV+D D L KG D ++I ++ G
Sbjct: 290 KGTTTRIVVGTPGRILDLVNEGACDLSRVSYLVLDEADRMLDKGFENDIRNIIGHTMQGP 349
Query: 358 KPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQ----SACIIQSVNVCASDEEK 413
+ T++F+ + P L + R + +V S ++ + Q V V EK
Sbjct: 350 ERQTLMFS-----ATWPDAVRRLAATFQRDPVRVTVGSDDLTANSRVEQVVEVFDEPREK 404
Query: 414 ---ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSH 470
+L ++ L ++ ++L + Q + S L+ KG+S+ G + +S
Sbjct: 405 DSRLLGHLRTL-MPKKSKGSTDDARILIFALYKKEAQRVDSMLRSKGFSVG-GLHGDMSQ 462
Query: 471 IKNSVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTV 528
K A S++ ++ L+ V VI F +++++Y+ + R
Sbjct: 463 AARIEALQNFKTGATSLLVATDVAARGLDIPNVAAVINYTFPLTIEDYIHRIGRTGRGGK 522
Query: 529 SGILHSFFTKD--DAAHAGQMIEILEQCG 555
SG +FFT + + A AG++ +L + G
Sbjct: 523 SGKSITFFTGEAHERALAGELARVLRESG 551
>gi|422698165|ref|ZP_16756085.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1346]
gi|315173277|gb|EFU17294.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1346]
Length = 433
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 256 GPFLLFLVSSQEKAAKV----RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
G LL + SQE A ++ R+ KPL+ + +L GA + QI L+ PE L+
Sbjct: 67 GNQLLIIAPSQELALQIAEVARTWAKPLQ---LTVQTLIGGANVSRQIDKLKK-RPEVLI 122
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--HTVVFNDCLT 369
TP R+L+L+ K + + +V+D +D L + + LSL +Q ++ P + +VF
Sbjct: 123 GTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSATA 182
Query: 370 YTSVPAVQNL 379
V Q+L
Sbjct: 183 DRVVNQAQSL 192
>gi|397480286|ref|XP_003811417.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2 [Pan
paniscus]
gi|402900782|ref|XP_003913346.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Papio anubis]
gi|403303808|ref|XP_003942514.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Saimiri boliviensis boliviensis]
gi|426347223|ref|XP_004041257.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Gorilla gorilla gorilla]
gi|441661856|ref|XP_004091548.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Nomascus leucogenys]
gi|194388512|dbj|BAG60224.1| unnamed protein product [Homo sapiens]
Length = 544
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 97 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 155
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 156 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 215
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 216 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 272
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 273 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 329
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 330 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 389
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 390 LREANQAI 397
>gi|358386508|gb|EHK24104.1| hypothetical protein TRIVIDRAFT_89504 [Trichoderma virens Gv29-8]
Length = 477
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 153/373 (41%), Gaps = 38/373 (10%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFS--FTGPFLLFLVSSQ 266
W S +D++ +GS T+ +SI+ K+G P + +
Sbjct: 88 WPSTLSGRDVVGVAETGSGKTMA----FALPCVESISLINKKGVKAVVVSPTRELAMQTH 143
Query: 267 EKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAI 326
E+ A++ S + + V L+ GA+ D Q L+ + +V+TP RL +S + +
Sbjct: 144 EQLARLASQLR------LKCVCLYGGASKDDQRALLQKGA-DIIVATPGRLKDFMSDETV 196
Query: 327 DVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFNDCLTYTSVPAVQNL-- 379
D+SG V+D D + I+ + P T++F T T +VQ+L
Sbjct: 197 DLSGCRFAVLDEADRMLDKGFEEDIKMILGACPPREERQTLMF----TATWPMSVQSLAS 252
Query: 380 ---------LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFH 430
+GS + + N SV Q+ I ++K + +Q++
Sbjct: 253 TFMVDPVKITIGSRGKETENGSVELQANTRISQKVEVMDGKDKEFRLLQIIKQHQQGKQK 312
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN-SVEADGRKRPAVSMID 489
+ + V + K++ + S L KG + + + S+EA + V +
Sbjct: 313 DDRILVFCLYKKEA--TRVESFLSRKGVRVGGIHGDLKQEQRTRSLEAFKTGKTPVLVAT 370
Query: 490 KDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
++ E ++VI F +++++YV + R +G + FT D AH+G +I
Sbjct: 371 DVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGEAITMFTVQDKAHSGSLIN 430
Query: 550 ILEQCGQVVPDAL 562
IL+ Q VPD L
Sbjct: 431 ILKGANQPVPDEL 443
>gi|53719796|ref|YP_108782.1| ATP-dependent RNA helicase [Burkholderia pseudomallei K96243]
gi|53724110|ref|YP_103224.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
gi|67639288|ref|ZP_00438162.1| dead/deah box helicase [Burkholderia mallei GB8 horse 4]
gi|121599488|ref|YP_993402.1| DEAD/DEAH box helicase [Burkholderia mallei SAVP1]
gi|124385746|ref|YP_001029162.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10229]
gi|126448376|ref|YP_001080910.1| DEAD/DEAH box helicase [Burkholderia mallei NCTC 10247]
gi|166999673|ref|ZP_02265508.1| DEAD/DEAH box helicase [Burkholderia mallei PRL-20]
gi|167903298|ref|ZP_02490503.1| ATP-dependent RNA helicase [Burkholderia pseudomallei NCTC 13177]
gi|217421948|ref|ZP_03453452.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 576]
gi|254177947|ref|ZP_04884602.1| DEAD/DEAH box helicase [Burkholderia mallei ATCC 10399]
gi|254200174|ref|ZP_04906540.1| DEAD/DEAH box helicase [Burkholderia mallei FMH]
gi|254206512|ref|ZP_04912864.1| DEAD/DEAH box helicase [Burkholderia mallei JHU]
gi|254257950|ref|ZP_04949004.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1710a]
gi|254297179|ref|ZP_04964632.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 406e]
gi|254358076|ref|ZP_04974349.1| DEAD/DEAH box helicase [Burkholderia mallei 2002721280]
gi|386861300|ref|YP_006274249.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026b]
gi|418382709|ref|ZP_12966643.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354a]
gi|418538458|ref|ZP_13104067.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026a]
gi|418553007|ref|ZP_13117849.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354e]
gi|52210210|emb|CAH36189.1| putative ATP-dependent RNA helicase [Burkholderia pseudomallei
K96243]
gi|52427533|gb|AAU48126.1| ATP-dependent RNA helicase RhlE, putative [Burkholderia mallei ATCC
23344]
gi|121228298|gb|ABM50816.1| DEAD/DEAH box helicase [Burkholderia mallei SAVP1]
gi|124293766|gb|ABN03035.1| putative ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC
10229]
gi|126241246|gb|ABO04339.1| DEAD/DEAH box helicase [Burkholderia mallei NCTC 10247]
gi|147749770|gb|EDK56844.1| DEAD/DEAH box helicase [Burkholderia mallei FMH]
gi|147753955|gb|EDK61020.1| DEAD/DEAH box helicase [Burkholderia mallei JHU]
gi|148027203|gb|EDK85224.1| DEAD/DEAH box helicase [Burkholderia mallei 2002721280]
gi|157807478|gb|EDO84648.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 406e]
gi|160698986|gb|EDP88956.1| DEAD/DEAH box helicase [Burkholderia mallei ATCC 10399]
gi|217395690|gb|EEC35708.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 576]
gi|238519823|gb|EEP83289.1| dead/deah box helicase [Burkholderia mallei GB8 horse 4]
gi|243064323|gb|EES46509.1| DEAD/DEAH box helicase [Burkholderia mallei PRL-20]
gi|254216639|gb|EET06023.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1710a]
gi|385347744|gb|EIF54394.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026a]
gi|385372277|gb|EIF77399.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354e]
gi|385377051|gb|EIF81671.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 354a]
gi|385658428|gb|AFI65851.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1026b]
Length = 516
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 138 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 193
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 194 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 253
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 254 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 306
>gi|377809931|ref|YP_005005152.1| DEAD/DEAH box helicase [Pediococcus claussenii ATCC BAA-344]
gi|361056672|gb|AEV95476.1| DEAD/DEAH box helicase family protein [Pediococcus claussenii ATCC
BAA-344]
Length = 440
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL + SQE A + V + + S+ GA + QI L++ +PE +V TP
Sbjct: 61 GTQLLIIAPSQELAIQTTEVVREWGTLIKLKVTSVTGGANMQRQIERLKT-KPEIVVGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTL 348
R+ ++ K + VS +S LV+D D L GDTL
Sbjct: 120 GRIKTMIDEKRLKVSEISALVIDEADQLLTGDTL 153
>gi|167816420|ref|ZP_02448100.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 91]
Length = 223
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 10 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 65
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 66 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 125
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 126 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 178
>gi|205364353|gb|ACI04543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, partial [Rattus
norvegicus]
Length = 614
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|126439983|ref|YP_001059500.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 668]
gi|126219476|gb|ABN82982.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 668]
Length = 514
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 137 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 192
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 193 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 252
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 253 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 305
>gi|348560357|ref|XP_003465980.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Cavia
porcellus]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|167581446|ref|ZP_02374320.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis TXDOH]
Length = 517
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 142 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 197
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 198 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPASRQTMLFSATL 257
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 258 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 310
>gi|120538559|gb|AAI29874.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
Length = 615
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|444726978|gb|ELW67488.1| putative ATP-dependent RNA helicase DDX5 [Tupaia chinensis]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|56090441|ref|NP_001007614.1| probable ATP-dependent RNA helicase DDX5 [Rattus norvegicus]
gi|354479420|ref|XP_003501908.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Cricetulus
griseus]
gi|50927691|gb|AAH79036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Rattus norvegicus]
gi|149054596|gb|EDM06413.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|149054597|gb|EDM06414.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|149054598|gb|EDM06415.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|344243055|gb|EGV99158.1| putative ATP-dependent RNA helicase DDX5 [Cricetulus griseus]
Length = 615
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|296201834|ref|XP_002748196.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 3
[Callithrix jacchus]
Length = 544
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 97 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 155
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 156 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 215
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 216 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 272
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 273 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 329
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 330 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 389
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 390 LREANQAI 397
>gi|134277372|ref|ZP_01764087.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 305]
gi|226198998|ref|ZP_03794561.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pakistan 9]
gi|134251022|gb|EBA51101.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 305]
gi|225929098|gb|EEH25122.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pakistan 9]
Length = 513
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 135 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 190
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 191 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 250
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 251 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 303
>gi|126453899|ref|YP_001066782.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106a]
gi|237812839|ref|YP_002897290.1| dead/deah box helicase [Burkholderia pseudomallei MSHR346]
gi|242315830|ref|ZP_04814846.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106b]
gi|254179293|ref|ZP_04885892.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1655]
gi|254189321|ref|ZP_04895832.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pasteur 52237]
gi|254198045|ref|ZP_04904467.1| DEAD/DEAH box helicase [Burkholderia pseudomallei S13]
gi|403519212|ref|YP_006653346.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BPC006]
gi|418540516|ref|ZP_13106052.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258a]
gi|418546765|ref|ZP_13111959.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258b]
gi|126227541|gb|ABN91081.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106a]
gi|157937000|gb|EDO92670.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pasteur 52237]
gi|169654786|gb|EDS87479.1| DEAD/DEAH box helicase [Burkholderia pseudomallei S13]
gi|184209833|gb|EDU06876.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1655]
gi|237504437|gb|ACQ96755.1| dead/deah box helicase [Burkholderia pseudomallei MSHR346]
gi|242139069|gb|EES25471.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106b]
gi|385361649|gb|EIF67530.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258a]
gi|385363056|gb|EIF68839.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 1258b]
gi|403074855|gb|AFR16435.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BPC006]
Length = 513
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 135 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 190
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 191 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 250
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 251 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 303
>gi|348511217|ref|XP_003443141.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Oreochromis niloticus]
Length = 628
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 131/307 (42%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 172 GPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 230
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 231 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 290
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +D EK K I++L+ + +
Sbjct: 291 VRQLAEDFLKEYVQINIGALQLSANHNILQIVDVC-NDGEKENKLIRLLEEIMSEKEN-- 347
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 348 --KTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDV 405
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ + ++Y+ + AR +G ++FFT ++ A ++ +L
Sbjct: 406 ASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLVSVL 465
Query: 552 EQCGQVV 558
+ Q +
Sbjct: 466 REANQAI 472
>gi|388580695|gb|EIM21008.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 969
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 44/307 (14%)
Query: 172 LDCP---SKFLIL-----CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
+DCP +K+ +L CL I+ ++ D P + + + S +D++
Sbjct: 334 IDCPKPVTKWSLLGLPSSCLEVIKY------LQYDQPSSIQAQAL---PAIMSGRDVIGV 384
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKP-LK 280
+GS TI + + D ++ + GP + + ++E A ++ CKP LK
Sbjct: 385 AKTGSGKTIAFLLPLFRHIKD-----QRPLENLEGPIGVIMTPTRELAVQIHRECKPFLK 439
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGV---SLLVVD 337
A G+ ++ + G+ I QI ++ E +V TP R++ L++ + V+ + + LV+D
Sbjct: 440 ALGLRAIAAYGGSPISEQIAEMKKGA-EIVVCTPGRMIDLLAANSGRVTNLRRTTYLVLD 498
Query: 338 RLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G +++ + +P TV+F+ + P L I + L +V
Sbjct: 499 EADRMFDMGFEPQVMKIINNVRPDRQTVLFS-----ATFPKQMESLARKILQKPLEITVG 553
Query: 395 SQSAC---IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+S I Q V V + K + +++L Y + + + L V + NL+
Sbjct: 554 GRSVVAPEIDQQVEV-REESSKFNRLLEILGQTYNEDDEA---RTLIFVDRQEAADNLLF 609
Query: 452 TLKCKGY 458
L+ KGY
Sbjct: 610 NLRIKGY 616
>gi|283854609|gb|ADB44900.1| DEAD(Asp-Glu-Ala-Asp) box polypeptide 5 [Macrobrachium nipponense]
Length = 540
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 158/393 (40%), Gaps = 36/393 (9%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIA 245
+R G E P+ W I +D + +GS T+ I A + +
Sbjct: 115 IRRQGYEIPTPIQAQGWPISL-----QGRDFVGIAQTGSGKTLGYILPAIVHINHQPYLE 169
Query: 246 RKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITG 301
R + GP L L ++E A ++ +V + FG I + + GA QI
Sbjct: 170 RGD-------GPIALVLAPTRELAQQILTVSQ---DFGTSSKIRSTCVFGGAPKGPQIRD 219
Query: 302 LRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPH 360
L E ++ P RL+ + ++ + LV+D D + IR+ + +P
Sbjct: 220 LERGV-EICIAIPGRLIDFLEASKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 278
Query: 361 TVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKG 417
T+ V+NL L +L++ S + I+Q V+VC + EK K
Sbjct: 279 RQTLMWSATWPK--EVRNLAEDFLKDYIQLNVGSLSLSANHNILQIVDVC-QEIEKDTKL 335
Query: 418 IQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEA 477
Q+L+ + + K + + K + + L+ G+ ++ V +
Sbjct: 336 RQLLN----EMAQEKAYKTIIFIETKRKVEEVTRGLRSTGWPAMCIHGDKSQQERDWVLS 391
Query: 478 DGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
+ R A ++ D + ++++ + VI D+ ++YV + R +G ++FF
Sbjct: 392 EFRSGRAPILVATDVAARGLDVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFF 451
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDALRDLCHTS 569
T D+ A +I++L++ QVV L ++ S
Sbjct: 452 TADNCKQAKDLIDVLKEANQVVNPRLFEIMEMS 484
>gi|83816893|ref|NP_031866.2| probable ATP-dependent RNA helicase DDX5 [Mus musculus]
gi|26354006|dbj|BAC40633.1| unnamed protein product [Mus musculus]
gi|74141529|dbj|BAE38540.1| unnamed protein product [Mus musculus]
gi|74177712|dbj|BAE38954.1| unnamed protein product [Mus musculus]
gi|82568932|gb|AAI08370.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|120537322|gb|AAI29875.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|127799027|gb|AAH62916.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|148702364|gb|EDL34311.1| mCG2872, isoform CRA_a [Mus musculus]
gi|148702366|gb|EDL34313.1| mCG2872, isoform CRA_a [Mus musculus]
gi|148702367|gb|EDL34314.1| mCG2872, isoform CRA_a [Mus musculus]
Length = 615
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|343958674|dbj|BAK63192.1| probable ATP-dependent RNA helicase DDX5 [Pan troglodytes]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|308808280|ref|XP_003081450.1| putative RNA helicase [Oryza sativa (ISS) [Ostreococcus tauri]
gi|116059913|emb|CAL55972.1| putative RNA helicase [Oryza sativa (ISS) [Ostreococcus tauri]
Length = 734
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 136/312 (43%), Gaps = 11/312 (3%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCE-PEFLVSTP 314
P L L ++E A + V +A G+ V ++ GA Q +++ +V+TP
Sbjct: 394 PICLVLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKNAMKAGGGAAVIVATP 453
Query: 315 ERLLKLVSLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
RL + I + V++LV+D R+ L + I + TV+F+
Sbjct: 454 GRLRDFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAIAGATRADRQTVMFSATWPM- 512
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC-ASDEEKILKGIQVLDHAYGDHFH 430
SV ++ + + + R+ + S I Q V V D+++ L +V+ G
Sbjct: 513 SVQSLASEFMCNPVRVRIGSEGLKASQSITQIVEVVEPQDKDRHLA--RVMKQYLGSP-K 569
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDK 490
P +++ + K + NL L + ++ + + + SVEA + + +
Sbjct: 570 DCPRTLIFGLYKK-ECANLHQRLSREWPAVCIHGDMSQADRERSVEAFKKGTSRILIATD 628
Query: 491 DHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+++ E VI F ++ ++YV + R +G+ H+FFT+ D A AG+++ +
Sbjct: 629 VAARGLDIKGVEYVINYTFPLTTEDYVHRIGRTGRAGATGLAHTFFTQHDKARAGELVNV 688
Query: 551 LEQCGQVVPDAL 562
L + G VP+ L
Sbjct: 689 LRKAGAEVPEDL 700
>gi|424742777|ref|ZP_18171098.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
gi|422944007|gb|EKU39017.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
Length = 389
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 25/316 (7%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 81 FRGEPRALILAPTRELALQIESDAKLLTKFTDLHVVTLLGGVDFDKQKKQLDANFVDIIV 140
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 141 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 200
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+Y + + L I + + + + + V D+ ++L+ I
Sbjct: 201 TFSYDVLNLARQWLFEPIT-VEIEPEQKTNNDVEQRVYVVAKQDKYRLLQDI-------- 251
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 252 --LREEPIDKVMIFANRRDQVRRLYDHLKRDGYRVGMLSGEIAQDKRLKMLDQFKQGKNN 309
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAH 543
MI D ++ + V V ++ + + +YV + R G+ SF ++DDA +
Sbjct: 310 IMIATD-VAGRGIHVDGVSHVVNYTLPEQSDDYVHRIGRTGRAGSQGVSISFLSEDDAFY 368
Query: 544 AGQMIEILEQCGQVVP 559
+ EI + G+ +P
Sbjct: 369 ---LPEIEKAIGKKLP 381
>gi|390601156|gb|EIN10550.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 966
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 35/332 (10%)
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
GP + + ++E A ++ CKP LK + V + G+ I QI ++ E +V
Sbjct: 372 MEGPIGVIMTPTRELAVQIHRECKPFLKVLNLRAVCAYGGSPIKDQIADMKKGA-EIIVC 430
Query: 313 TPERLLKLV---SLKAIDVSGVSLLVVDRLDSLS----KGDTLSLIRQSISGKPHTVVFN 365
TP R++ L+ S + ++ V+ +V+D D + + + +I +I TV+F+
Sbjct: 431 TPGRMIDLLTANSGRVTNLKRVTYIVLDEADRMFDMGFEPQVMKII-NNIRPDRQTVLFS 489
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDH 423
+ P + L I R L +V +S A I+ + ++ K + +++L
Sbjct: 490 -----ATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRPEDTKFTRLLEIL-- 542
Query: 424 AYGDHFHSEP-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI-KNSVEADGR- 480
G ++ +P + L V + NL+ L +GY C+ H K V+ D
Sbjct: 543 --GQMYNEDPECRTLIFVDRQEAADNLLRELLRRGYL------CMSLHGGKEQVDRDQTI 594
Query: 481 ---KRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
K V ++ ++ L+ + ++VI D M++YV R G +F
Sbjct: 595 ADFKSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTF 654
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
T++ ++ + L+ VP L L +
Sbjct: 655 ITEEQERYSVDIYRALKASNAPVPAELEQLAN 686
>gi|410077537|ref|XP_003956350.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
gi|372462934|emb|CCF57215.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
Length = 511
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 141/339 (41%), Gaps = 39/339 (11%)
Query: 252 FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF---------------GIHTVSLHPGAAID 296
F+F P + LVSS K V P + G+ ++ G D
Sbjct: 150 FAFGVPAIHSLVSSSNKKDISVLVISPTRELASQIYDNLIILTDKVGLECCCIYGGVPKD 209
Query: 297 HQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIR 352
Q LR + +V+TP RLL L+ ++++S V LV+D D L KG D ++I+
Sbjct: 210 EQRKQLRRSQ--VVVATPGRLLDLIQEGSVNLSKVQYLVLDEADRMLEKGFEEDIKNIIK 267
Query: 353 QSISGKPHTVVFNDCLTYTSV-PAVQNLLLGSINRLSLNQSVASQSAC-----IIQSVNV 406
++ + + L +T+ P L + R + S+ ++ I Q V V
Sbjct: 268 ETNGNRAN----RQTLMFTATWPKEVRELASTFMRDPVKVSIGNRDELTANKRITQIVEV 323
Query: 407 CA--SDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGS 464
+ E K+L +L G ++ + + + K++ + L+ GY ++
Sbjct: 324 VEPHTKERKLL---DLLKKYQGGAKKNDKVLIFALYKKEAA--RVERNLRYNGYDVAAIH 378
Query: 465 NCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSM 523
+ + D ++ + ++ D + ++ + VI F +++++YV +
Sbjct: 379 GDLSQQQRTQALNDFKQGKSSLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT 438
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
R +G+ H+ FT+ + AG ++ +L Q VP+ L
Sbjct: 439 GRAGQTGVAHTLFTEQEKHLAGALVNVLNGANQPVPEDL 477
>gi|359451692|ref|ZP_09241090.1| probable DEAD-box ATP-dependent RNA helicase SERP1688
[Pseudoalteromonas sp. BSi20480]
gi|358042514|dbj|GAA77339.1| probable DEAD-box ATP-dependent RNA helicase SERP1688
[Pseudoalteromonas sp. BSi20480]
Length = 440
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAADS 243
+E + H G+ Q P + + + + DI S GS T+ A+++
Sbjct: 12 LETQLAHQGITQ--PTDIQAHAVP---TALAGHDIFAQSKTGSGKTL---AFLLPAVQRV 63
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGL 302
I +K S P +L + ++E A +V + + L A I V + G + QI L
Sbjct: 64 IKQK---ALSKRDPRVLIVAPTRELATQVFTQLRLLIAGTAIKAVKVLGGENFNDQIKAL 120
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGK- 358
R+ +P+F+V+TP RL +S +++ +SG+ LL+ D D L + L LI + +
Sbjct: 121 RN-DPQFVVATPGRLADHISKRSLQLSGLELLIFDEADRILDLGFTEQLKLINDEANHRL 179
Query: 359 PHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC 407
T++F+ L + V A+ LL +++L+ + Q + I Q++ +
Sbjct: 180 RQTLLFSATLDHAQVDALSRNLLKKPKQITLS-AANEQHSDITQTLYLA 227
>gi|351710344|gb|EHB13263.1| Putative ATP-dependent RNA helicase DDX5 [Heterocephalus glaber]
Length = 615
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|4758138|ref|NP_004387.1| probable ATP-dependent RNA helicase DDX5 [Homo sapiens]
gi|300793700|ref|NP_001178324.1| probable ATP-dependent RNA helicase DDX5 [Bos taurus]
gi|384475891|ref|NP_001245091.1| probable ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|73965213|ref|XP_850467.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Canis lupus familiaris]
gi|301778273|ref|XP_002924553.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Ailuropoda melanoleuca]
gi|332227004|ref|XP_003262677.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Nomascus leucogenys]
gi|397480284|ref|XP_003811416.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1 [Pan
paniscus]
gi|402900780|ref|XP_003913345.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Papio anubis]
gi|403303806|ref|XP_003942513.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Saimiri boliviensis boliviensis]
gi|410981520|ref|XP_003997116.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Felis catus]
gi|426238277|ref|XP_004013081.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Ovis aries]
gi|426347221|ref|XP_004041256.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Gorilla gorilla gorilla]
gi|129383|sp|P17844.1|DDX5_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5; AltName: Full=RNA helicase p68
gi|35220|emb|CAA36324.1| unnamed protein product [Homo sapiens]
gi|38318|emb|CAA33751.1| unnamed protein product [Homo sapiens]
gi|2599360|gb|AAB84094.1| RNA helicase p68 [Homo sapiens]
gi|16359122|gb|AAH16027.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
gi|30582725|gb|AAP35589.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) [Homo sapiens]
gi|61362303|gb|AAX42197.1| DEAD box polypeptide 5 [synthetic construct]
gi|61362310|gb|AAX42198.1| DEAD box polypeptide 5 [synthetic construct]
gi|119614608|gb|EAW94202.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, isoform CRA_a [Homo
sapiens]
gi|119614609|gb|EAW94203.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, isoform CRA_a [Homo
sapiens]
gi|123979568|gb|ABM81613.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [synthetic construct]
gi|123994197|gb|ABM84700.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [synthetic construct]
gi|168277560|dbj|BAG10758.1| ATP-dependent RNA helicase DDX5 [synthetic construct]
gi|197692215|dbj|BAG70071.1| ATP-dependent RNA helicase DDX5 [Homo sapiens]
gi|296476161|tpg|DAA18276.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 2 [Bos
taurus]
gi|380810156|gb|AFE76953.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|383416203|gb|AFH31315.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|384945576|gb|AFI36393.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|410264808|gb|JAA20370.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Pan troglodytes]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|379727681|ref|YP_005319866.1| ATP-dependent RNA helicase YfmL [Melissococcus plutonius DAT561]
gi|376318584|dbj|BAL62371.1| ATP-dependent RNA helicase YfmL [Melissococcus plutonius DAT561]
Length = 387
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
+G LL + SQE A ++ V + K + T L GA I Q+ L+ +PE +V T
Sbjct: 63 SGNQLLIIAPSQELAMQITRVAQDWGKLLQLKTQVLIGGANIHRQVERLKQ-KPEIVVGT 121
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI--SGKPHTVVFNDCLTYT 371
P R+ L+ +K I + + +V+D +D L + D L++ +Q + S + +VF
Sbjct: 122 PGRIFDLMKMKKIKSNSLRTIVIDEVDQLLQQDELTITKQLLNYSAFNYQIVFFSATAKN 181
Query: 372 SVPAVQNLL 380
+ +NL+
Sbjct: 182 VLTEAENLV 190
>gi|197692465|dbj|BAG70196.1| ATP-dependent RNA helicase DDX5 [Homo sapiens]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREASQAINPKLLQL 474
>gi|440912672|gb|ELR62224.1| Putative ATP-dependent RNA helicase DDX5, partial [Bos grunniens
mutus]
Length = 671
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 224 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 282
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 283 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 342
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 343 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 399
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 400 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 456
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 457 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 516
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 517 LREANQAI 524
>gi|74354729|gb|AAI03319.1| DDX5 protein [Bos taurus]
Length = 671
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 224 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 282
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 283 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 342
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 343 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 399
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 400 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 456
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 457 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 516
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 517 LREANQAI 524
>gi|352517851|ref|YP_004887168.1| putative RNA helicase [Tetragenococcus halophilus NBRC 12172]
gi|348601958|dbj|BAK95004.1| putative RNA helicase [Tetragenococcus halophilus NBRC 12172]
Length = 410
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 259 LLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
LL + SQE +V V +P + SL GA QI L+ +PE L+ TP RL
Sbjct: 69 LLIVTPSQELGVQVADVARPWALDLNLQVQSLIGGANKKRQIEKLKK-KPEVLIGTPGRL 127
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHT--VVFNDCLTYTSVPA 375
++L+ K + + + +++D D L + + + ++ I P+T F ++PA
Sbjct: 128 VELIKEKKLKAANIQTVILDEADQLLQKEAVGFMQTVIKSIPNTSQYAFFSATATKALPA 187
Query: 376 VQNLL 380
++ L
Sbjct: 188 IKQLF 192
>gi|296201830|ref|XP_002748194.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Callithrix jacchus]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|424903669|ref|ZP_18327182.1| ATP-dependent RNA helicase [Burkholderia thailandensis MSMB43]
gi|390931542|gb|EIP88943.1| ATP-dependent RNA helicase [Burkholderia thailandensis MSMB43]
Length = 508
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 134 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 190 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPASRQTMLFSATL 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 250 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 302
>gi|344291256|ref|XP_003417352.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Loxodonta
africana]
Length = 616
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|301510878|ref|ZP_07236115.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB058]
Length = 344
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 19/222 (8%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDKQKKQLDANFVDIMV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+Y + + L + + + + + + V D+ ++L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVT-VEIEPEQKTNNDVEQRVYVVAKQDKYRLLQDI-------- 245
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCI 467
EP+ KV+ + + + L LK GY + S I
Sbjct: 246 --LREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEI 285
>gi|291406391|ref|XP_002719530.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 3
[Oryctolagus cuniculus]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|350412507|ref|XP_003489671.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
impatiens]
Length = 619
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 160/401 (39%), Gaps = 52/401 (12%)
Query: 188 NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADS 243
N +R G + + W I S +D+ + +GS T+ I A +
Sbjct: 127 NEIRRQGFGEPTAIQAQGWPIAL-----SGRDMVGIAQTGSGKTLAYILPAIVHINHQPR 181
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT----VSLHPGAAIDHQI 299
+ R + GP L L ++E A +++ V FGI + + GA Q
Sbjct: 182 LNRND-------GPIALILAPTRELAQQIQQVAS---DFGISSQVRNTCIFGGAPKGPQA 231
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-K 358
L E ++TP RL+ + ++ + LV+D D + IR+ + +
Sbjct: 232 RDLERGV-EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIR 290
Query: 359 PHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL 415
P T+ V+NL L ++++ + + I+Q V+VC + EK
Sbjct: 291 PDRQTLMWSATWPK--EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVC-EEYEKEG 347
Query: 416 KGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNC 466
K +++L+ +EP K + V K ++ + G+ +
Sbjct: 348 KLMKLLEE-----ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDY 402
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+++ +NS R A+ + ++E+ + VI D+ + ++YV + R
Sbjct: 403 VLNQFRNS-------RSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRS 455
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+G ++FFT +A A +I++LE+ QVV L +L
Sbjct: 456 QRTGTAYAFFTPGNAHKASDLIQVLEEAKQVVNPKLYELSR 496
>gi|55562721|gb|AAH86320.1| Ddx5 protein, partial [Mus musculus]
Length = 648
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 200 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 258
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 259 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 318
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 319 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 375
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 376 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 432
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 433 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 492
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 493 LREANQAI 500
>gi|194216755|ref|XP_001495197.2| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Equus
caballus]
Length = 614
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|402759618|ref|ZP_10861874.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. NCTC 7422]
Length = 383
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 139/336 (41%), Gaps = 26/336 (7%)
Query: 234 AWIVATAADSIARKEKEGFSFTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHP 291
A++++ D + KE F G P L L ++E A ++ S + L F +H V+L
Sbjct: 56 AFLISVINDLLNNPVKEQ-RFRGEPRALILAPTRELALQIESDAQALTKFSNLHLVTLLG 114
Query: 292 GAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI 351
G + Q L + +V+TP RL+ V K + + + LV+D D L + +
Sbjct: 115 GVDFEKQKKMLDRNFVDIIVATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSV 174
Query: 352 RQSISGKP-----HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNV 406
++ + P T++F+ +Y + + L + + + + + + V
Sbjct: 175 KRIVRYSPFKEQRQTLMFSATFSYDVLNLARQWLFEPVT-VEIEPEQKTNNDVEQRVYVV 233
Query: 407 CASDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSN 465
D+ K+L+ I EP+ KV+ + + + L LK GY + S
Sbjct: 234 AKQDKYKLLQEI----------LREEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSG 283
Query: 466 CIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSM 523
I + + ++ MI D ++ + V V +F + + +YV +
Sbjct: 284 EIAQDKRLKMLDQFKQGKNNIMIATD-VAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRT 342
Query: 524 ARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
R G+ SF ++DDA + + EI + G+ +P
Sbjct: 343 GRAGAQGVSISFLSEDDAFY---LPEIEKAIGKKLP 375
>gi|168009407|ref|XP_001757397.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691520|gb|EDQ77882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++ + E VI F ++ ++YV + R G+ H+FFT+ D A AG+++ +L + GQ
Sbjct: 377 DIPDVEYVINYSFPLTTEDYVHRIGRTGRAGKKGLSHTFFTQADRARAGELVNVLREAGQ 436
Query: 557 VVPDAL 562
VP+ L
Sbjct: 437 TVPEEL 442
>gi|406606644|emb|CCH41966.1| hypothetical protein BN7_1505 [Wickerhamomyces ciferrii]
Length = 528
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 148/318 (46%), Gaps = 27/318 (8%)
Query: 259 LLFLVSSQEKAAKVRSVCKPLK-AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
+L + ++E A+++ K L G++ V L+ G + Q L+ + +++TP RL
Sbjct: 191 VLAVSPTRELASQIYDNLKTLTDKVGLNCVCLYGGVPKEQQRRDLKKAQ--IVIATPGRL 248
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDCLTYTSV 373
+ L++ ++++S V LV+D D L KG D +++R + T++F T T
Sbjct: 249 IDLMNEGSVNLSNVHYLVLDEADRMLEKGFEEDIKNVMRSTTHKARQTLMF----TATWP 304
Query: 374 PAVQNLLLGSIN---RLSL-NQSVASQSACIIQSVNVCA--SDEEKILKGIQVLDHAYGD 427
V+ L G + ++S+ N+ S + I Q V V S E K+L +L
Sbjct: 305 KEVRELASGFMKEPVKVSIGNRDELSANKRITQVVEVVEPFSKENKLL---SLLKQYQSG 361
Query: 428 HFHSEPLKVLYIVGKD-SKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
+ + + + K+ S+ + L L KGY ++ + +S + + D K+ +
Sbjct: 362 SKKDDKVLIFALYKKEASRIERL---LINKGYKVA-AIHGDLSQQQRTQSLDNFKKGHSN 417
Query: 487 MIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ + VI F +++++YV + R G H+ FT+ + +
Sbjct: 418 LLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGAYGTAHTLFTEQEKHLS 477
Query: 545 GQMIEILEQCGQVVPDAL 562
G +I +L+ Q VPD L
Sbjct: 478 GALINVLKGANQPVPDEL 495
>gi|440794934|gb|ELR16079.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 972
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 146/348 (41%), Gaps = 76/348 (21%)
Query: 256 GPFLLFLVSSQEKAAKV-RSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E A ++ R K K G+ ++ ++ G+ + QI+ L++ E +V TP
Sbjct: 316 GPIGLIMAPTRELALQIHRDAKKFCKGIGLRSICVYGGSVVADQISKLKAGA-EIVVCTP 374
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++S + ++ V+ +V+D R+ + + I +++ TV+F+
Sbjct: 375 GRMIDILSTNSGRICNLRRVTFVVLDEADRMFDMGFEPQIMKILENVRPDRQTVMFSATF 434
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
A + +L + L V ++S VC+ E+ +
Sbjct: 435 PRPVETAARKIL-----QKPLEIVVGTRS-------TVCSDIEQNV-------------- 468
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSV-----EADGRKRP 483
+ ++SKF L+ L GS I ++SV E RK P
Sbjct: 469 ---------EVRSEESKFPRLLELLNLWD---DRGSILIFVDSQSSVDELFAELLKRKFP 516
Query: 484 AVSM------IDKDH-ISTAELEEYEVVI----------VPDFII--------SMKNYVE 518
+S+ ID+DH I+ + E +++ VPD + M++YV
Sbjct: 517 VMSLHGGQDQIDRDHTINKFKKTENAILVATSVVARGLDVPDLNLVVNYDCPNHMEDYVH 576
Query: 519 ILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLC 566
+ R G ++F T D+ +A +++ LEQ G VP++L+ L
Sbjct: 577 RVGRTGRAGRKGWAYTFVTDDEDKYAPDLVKALEQSGASVPESLKKLA 624
>gi|167619557|ref|ZP_02388188.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis Bt4]
Length = 454
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 140 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 195
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 196 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPASRQTMLFSATL 255
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 256 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 308
>gi|30584123|gb|AAP36310.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA
helicase, 68kDa) [synthetic construct]
gi|60653929|gb|AAX29657.1| DEAD box polypeptide 5 [synthetic construct]
Length = 615
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|359429519|ref|ZP_09220543.1| putative helicase [Acinetobacter sp. NBRC 100985]
gi|358234980|dbj|GAB02082.1| putative helicase [Acinetobacter sp. NBRC 100985]
Length = 383
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 130/316 (41%), Gaps = 25/316 (7%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S K L F +H V+L G D Q L + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAKALTKFSDLHLVTLLGGVDFDKQKKMLDRNFVDIIV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDRIEFLVIDEADRLLDMGFIPSVKRIVRYSPFKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+Y + + L + + + + + + V D+ K+L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVT-VEIEPEQKTNNDVEQRVYVVENKDKYKLLQEI-------- 245
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 --LKDEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQGKNN 303
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAH 543
MI D ++ + V V +F + + +YV + R G+ SF ++DDA +
Sbjct: 304 IMIATD-VAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDAFY 362
Query: 544 AGQMIEILEQCGQVVP 559
+ EI + G+ +P
Sbjct: 363 ---LPEIEKAIGKKLP 375
>gi|197099326|ref|NP_001126958.1| probable ATP-dependent RNA helicase DDX5 [Pongo abelii]
gi|75061603|sp|Q5R4I9.1|DDX5_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|55733290|emb|CAH93327.1| hypothetical protein [Pongo abelii]
Length = 614
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 460 LREANQAI 467
>gi|448872694|gb|AGE46032.1| dead-box ATP-dependent RNA helicase, partial [Elaeis guineensis]
Length = 333
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++++ VVI DF +++YV + R SG+ ++FF D+ +A ++++LE GQ
Sbjct: 20 DIKDIRVVINYDFPTGVEDYVHRIGRTGRAGASGVAYTFFCDQDSKYASDLVKVLEGAGQ 79
Query: 557 VVPDALRDL 565
VP L D+
Sbjct: 80 HVPSELLDM 88
>gi|395533175|ref|XP_003768636.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Sarcophilus
harrisii]
Length = 758
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 311 GPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 369
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 370 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 429
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 430 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 486
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 487 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 543
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 544 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 603
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 604 LREANQAI 611
>gi|355568839|gb|EHH25120.1| hypothetical protein EGK_08882 [Macaca mulatta]
Length = 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|341940436|sp|Q61656.2|DDX5_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box RNA helicase DEAD1; Short=mDEAD1; AltName:
Full=DEAD box protein 5; AltName: Full=RNA helicase p68
Length = 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 460 LREANQAI 467
>gi|340725185|ref|XP_003400954.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX5-like [Bombus terrestris]
Length = 607
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 160/401 (39%), Gaps = 52/401 (12%)
Query: 188 NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADS 243
N +R G + + W I S +D+ + +GS T+ I A +
Sbjct: 127 NEIRRQGFGEPTAIQAQGWPIAL-----SGRDMVGIAQTGSGKTLAYILPAIVHINHQPR 181
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT----VSLHPGAAIDHQI 299
+ R + GP L L ++E A +++ V FGI + + GA Q
Sbjct: 182 LNRND-------GPIALILAPTRELAQQIQQVAS---DFGISSQVRNTCIFGGAPKGPQA 231
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-K 358
L E ++TP RL+ + ++ + LV+D D + IR+ + +
Sbjct: 232 RDLERGV-EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIR 290
Query: 359 PHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL 415
P T+ V+NL L ++++ + + I+Q V+VC + EK
Sbjct: 291 PDRQTLMWSATWPK--EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVC-EEYEKEG 347
Query: 416 KGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNC 466
K +++L+ +EP K + V K ++ + G+ +
Sbjct: 348 KLMKLLEE-----ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDY 402
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+++ +NS R A+ + ++E+ + VI D+ + ++YV + R
Sbjct: 403 VLNQFRNS-------RSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRS 455
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+G ++FFT +A A +I++LE+ QVV L +L
Sbjct: 456 QRTGTAYAFFTPGNAHKASDLIQVLEEAKQVVNPKLYELSR 496
>gi|255067653|ref|ZP_05319508.1| putative ATP-dependent RNA helicase RhlE [Neisseria sicca ATCC
29256]
gi|255048127|gb|EET43591.1| putative ATP-dependent RNA helicase RhlE [Neisseria sicca ATCC
29256]
Length = 457
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 177 KFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQI 233
KF L L+ I +A+R +G E P + + I F +DI+ + +GS T
Sbjct: 4 KFADLNLDKNILSAVRSEGYESPTP--IQAQAIPF---ALEGRDIMASAQTGSGKTA--- 55
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR----SVCKPLKAFGIHTVSL 289
A+++ T R EK G GP L L ++E AA+V + K ++ F TVS+
Sbjct: 56 AFLLPTLQRLTKRSEKPG---KGPRALVLTPTRELAAQVEKNALAYAKNMRWF--RTVSI 110
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GA+ +Q L S + +V+TP RL+ L+ +D + + +L++D D +
Sbjct: 111 VGGASFGYQTRAL-SKPVDLIVATPGRLMDLMQSGKVDFARLEVLILDEADRM 162
>gi|431909746|gb|ELK12892.1| Putative ATP-dependent RNA helicase DDX53 [Pteropus alecto]
Length = 567
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 143/332 (43%), Gaps = 36/332 (10%)
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLR 303
++R+E+ GP +L L ++E A +V + C G+ ++ ++ G + + QI +
Sbjct: 232 VSREER-----NGPGMLVLTPTRELALQVEAECSKYSYKGLTSICIYGGESREQQIKDIA 286
Query: 304 SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPH-- 360
+ +++TP RL L K++++ ++ LV+D D L G +++ +P
Sbjct: 287 KGT-DIIIATPGRLNDLQMNKSVNLKSITYLVLDEADKMLDLGFDHQIMKILFDIRPDRQ 345
Query: 361 ----TVVFNDCL-----TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE 411
+ + D + +Y P + + +G+++ ++N + Q+V V +E
Sbjct: 346 TIMTSATWPDTIHRLAQSYLKEPMI--VYVGTLDLAAVN--------TVKQNVTVTTEEE 395
Query: 412 EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI 471
++ L IQ S KV+ V + +L S L +G + +
Sbjct: 396 KRSL--IQEFLRNL-----SPKDKVIIFVNRKLVADDLSSDLSLQGIPVQSLHGSREQSD 448
Query: 472 KNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530
+ D + +I D S ++++ V DF +++ YV + R G
Sbjct: 449 REQALNDFKSGDVKILIATDLASRGLDVDDVTHVYNYDFPRNIEEYVHRVGRTGRAGKMG 508
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
I + T+ D + ++I+ILE+ Q VP+ L
Sbjct: 509 ISTTLMTQSDWKNVPELIKILERANQSVPEDL 540
>gi|226021|prf||1406327A growth regulated nuclear 68 protein
Length = 594
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 147 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 205
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 206 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 265
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 266 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 322
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 323 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 379
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 380 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 439
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 440 LREANQAINPKLLQL 454
>gi|405962641|gb|EKC28298.1| Putative ATP-dependent RNA helicase DDX46 [Crassostrea gigas]
Length = 913
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 127/323 (39%), Gaps = 24/323 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP + + ++E A ++ S CK K G+ V ++ G I QI L R CE +V T
Sbjct: 323 GPIAIIMTPTRELAMQITSECKKFTKPLGLKAVCVYGGTGISEQIAELKRGCE--IIVCT 380
Query: 314 PERLLKLVSLKAIDVSG------VSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDC 367
P R++ ++S V+ V L DR+ + ++ I SI TV+F+
Sbjct: 381 PGRMIDMLSANNGRVTNLRRCTYVVLDEADRMFDMGFEPQVTKIVDSIRPDRQTVMFS-- 438
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSA-CIIQSVNVCASDEEKILKGIQVLDHAYG 426
+ P L I + + V +S C +V DE+K + L Y
Sbjct: 439 ---ATFPRQMEALARKILQKPIEVQVGGRSVVCRDVDQSVIVIDEDKKFLKLLELLGLY- 494
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
E VL V K L+ L Y + I + ++S D K V
Sbjct: 495 ----QEKGSVLVFVDKQEHADELMKELMTHSYPCMSLHGGIDQYDRDSTIVDF-KNGNVK 549
Query: 487 MIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ +++V ++ ++YV R G +F T + +A
Sbjct: 550 LLVATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAFTFITPEQERYA 609
Query: 545 GQMIEILEQCGQVVPDALRDLCH 567
G +I+ LE G V L L +
Sbjct: 610 GDIIKALELSGATVNADLEKLWN 632
>gi|355754295|gb|EHH58260.1| hypothetical protein EGM_08064, partial [Macaca fascicularis]
Length = 599
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 152 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 210
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 211 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 270
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 271 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 327
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 328 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 384
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 385 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 444
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 445 LREANQAINPKLLQL 459
>gi|449439147|ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 42/333 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S K K G+ V ++ G+ + QI+ L+ E +V TP
Sbjct: 545 GPIGLIMAPTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGA-EIVVCTP 603
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ + K ++ V+ LV+D D + ++ I Q+I TV+F+
Sbjct: 604 GRMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFS--- 660
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
+ P +L + + V +S I Q V V +E L
Sbjct: 661 --ATFPRQVEILARKVLNKPVEVQVGGRSVVNKDIAQLVEVRPENERF-----LRLLELL 713
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEA 477
G+ + E K+L V K L L GY T +S K++V
Sbjct: 714 GEWY--EKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNV-- 769
Query: 478 DGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+++ I+ L+ E E+VI D ++YV + R G +F
Sbjct: 770 -------CNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITF 822
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
++D+ +A +++ LE QVVPD LR L +
Sbjct: 823 IAEEDSRYAPDLVKALELSEQVVPDDLRALADS 855
>gi|73973757|ref|XP_853740.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Canis lupus
familiaris]
Length = 646
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 137/319 (42%), Gaps = 29/319 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ +V ++ G + QI L+ + +++TP
Sbjct: 314 GPGMLVLTPTRELALQVEAECSKYSYKGLKSVCIYGGGDRNGQIQDLKKGV-DIIIATPG 372
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
RL L +++ ++ LV+D D L G +++ + +P +T + P
Sbjct: 373 RLNDLQMNNFVNLRSITYLVLDEADKMLDMGFEPQIMKILLDVRPDR---QTIMTSATWP 429
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSE 432
L S + + V + + +V N+ + EE+ IQ + S
Sbjct: 430 YAVRRLAQSYLKAPMIVYVGTLDLVAVSTVKQNIIVTTEEEKRSHIQRFLESI-----SS 484
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP-------AV 485
KV+ V + + +L S L + S+ + + + E R+R V
Sbjct: 485 QDKVIVFVSRKAIADHLSSDLILQHVSVES--------LHGNREQCDRERALENFKTGKV 536
Query: 486 SMIDKDHISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ +++ L+ ++ V DF +++ YV + R +GI + T++D
Sbjct: 537 RILIATDLASRGLDVNDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGISITLITRNDWRV 596
Query: 544 AGQMIEILEQCGQVVPDAL 562
AG++I ILE+ Q VP+ L
Sbjct: 597 AGELINILERAHQSVPEEL 615
>gi|334323205|ref|XP_001379329.2| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Monodelphis
domestica]
Length = 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|321258735|ref|XP_003194088.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus gattii WM276]
gi|317460559|gb|ADV22301.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus gattii WM276]
Length = 586
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 12/288 (4%)
Query: 283 GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
G+ +V + G D Q L E +V TP R L L +D+S VS LV+D D +
Sbjct: 263 GLKSVCIFGGVGKDGQAKELSQREARVVVGTPGRTLDLADSGELDLSSVSYLVLDEADRM 322
Query: 343 SKGDTLSLIRQSISGKP------HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQ 396
+ IR+ I+ P TV+F+ SV + + L R+++ S
Sbjct: 323 LDAGFENDIRRIIAHTPGHKEGRQTVMFSATWP-ESVRRLASTFLNDPLRITVGSDELSA 381
Query: 397 SACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE--PLKVLYIVGKDSKFQNLVSTLK 454
+ I Q V V + +K + L H +S+ P ++L + Q L T++
Sbjct: 382 NKRIEQVVEVLDNPRDKDFRLTHHLRAHLKAHPNSKASPTRILVFALYKKEAQRLEYTIR 441
Query: 455 CKGYSISTGSNCIVSHIK-NSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISM 513
GY++ + + ++EA + V + ++ + +VI F ++
Sbjct: 442 RAGYAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAARGLDIPDVGLVINVTFPLTT 501
Query: 514 KNYVEILTSMARHTVSGILHSFFTKD--DAAHAGQMIEILEQCGQVVP 559
+++V R +G +FFT + + + AG+ + +L G +P
Sbjct: 502 EDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLAGEFMRVLRDVGAEIP 549
>gi|311748030|ref|ZP_07721815.1| ATP-dependent RNA helicase RhlE [Algoriphagus sp. PR1]
gi|126575012|gb|EAZ79370.1| ATP-dependent RNA helicase RhlE [Algoriphagus sp. PR1]
Length = 379
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 208 IEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSS 265
IE + + KDIL +GS T I I+ + + +KE S P L+ LV +
Sbjct: 31 IEAIPAFLNRKDILGIAPTGSGKTASYILPIL-----QLLQGKKEHRSRNIPVLV-LVPT 84
Query: 266 QEKAAKVRSVCKPLKAF---GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVS 322
+E AA+V V F I T+++ G +I+ Q+ L + LV+TP RLL L+S
Sbjct: 85 RELAAQVAQVADNFSRFLERRIKTLAVFGGVSINPQMMKLNGTD--ILVATPGRLLDLLS 142
Query: 323 LKAIDVSGVSLLVVDRLD 340
A+ +S V +LV+D +D
Sbjct: 143 KNALSISDVEILVLDEMD 160
>gi|51263|emb|CAA46581.1| p68 RNA helicase [Mus musculus]
Length = 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 460 LREANQAI 467
>gi|420157279|ref|ZP_14664117.1| DEAD/DEAH box helicase [Clostridium sp. MSTE9]
gi|394756572|gb|EJF39652.1| DEAD/DEAH box helicase [Clostridium sp. MSTE9]
Length = 414
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF--GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
+ L ++E A + V K + + GI ++L+ G I QI L+ C P+ +V+TP R+
Sbjct: 75 VILCPTRELAVQTTGVLKQMATYKQGIRVLALYGGEPIQRQIMALKRC-PQIIVATPGRM 133
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCLT 369
+ + + +SGV+ +V+D D L G + + I Q + + TV+F+ L+
Sbjct: 134 MDHMRRRTTRLSGVNCIVLDEADQMLDMGFREDIHTILQCVPTERQTVLFSATLS 188
>gi|392593094|gb|EIW82420.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 715
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 142/328 (43%), Gaps = 31/328 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CKP L+ + V + G+ I QI L+ E +V TP
Sbjct: 198 GPLAIVMTPTRELAVQIHRECKPFLRVMNLRAVCAYGGSPIKDQIAELKKGA-EIIVCTP 256
Query: 315 ERLLKLV---SLKAIDVSGVSLLVVDRLDSLS----KGDTLSLIRQSISGKPHTVVFNDC 367
R++ L+ S + ++ V+ +V+D D + + + +I +I TV+F+
Sbjct: 257 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKII-NNIRPDRQTVLFS-- 313
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAY 425
+ P + L I L +V +S A I+ + ++ K + +++L
Sbjct: 314 ---ATFPKQMDSLARKILHKPLEITVGGRSVVAAEIEQIVEVRPEDSKFNRLLEIL---- 366
Query: 426 GDHFHSEP-LKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRK 481
G ++ +P + L V + NL+ L KGY S+ G + + ++S AD K
Sbjct: 367 GQMYNEDPECRTLIFVDRQEGADNLLRDLMRKGYLCMSLHGGKDQV---DRDSTIADF-K 422
Query: 482 RPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKD 539
V ++ ++ L+ + ++VI D M++YV R G +F T +
Sbjct: 423 SGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITSE 482
Query: 540 DAAHAGQMIEILEQCGQVVPDALRDLCH 567
++ + L+ VP L +L +
Sbjct: 483 QERYSVDIFRALKASNAEVPKELEELAN 510
>gi|338710820|ref|XP_001497891.3| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Equus
caballus]
Length = 572
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 169/392 (43%), Gaps = 34/392 (8%)
Query: 182 CLNAIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQI-AWIVA 238
C + ++ G ++ P+ +W I D++ +G+ T+ + +
Sbjct: 173 CYPEVMENIQKAGFQKPTPIQSQAWPIVL-----QGIDLIGVAQTGTGKTLSYLMPGFIH 227
Query: 239 TAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQ 298
+ IAR+++ GP +L L ++E A +V + C G+ +V ++ G + Q
Sbjct: 228 LDSQPIAREKR-----NGPGMLVLTPTRELALQVEAECSKYSYKGLKSVCIYGGGDRNGQ 282
Query: 299 ITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISG 357
I L + +++TP RL L +++ V+ LV+D D L G +++ +
Sbjct: 283 IQDLTKGV-DIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDV 341
Query: 358 KP--HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEK 413
+P TV+ + Y+ Q+ L + + V + + +V N+ + EE+
Sbjct: 342 RPDRQTVMTSATWPYSVRRLAQSYL-----KEPMIVYVGTLDLVAVSTVKQNIIVTTEEE 396
Query: 414 ILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIK 472
IQ + S KV+ V + + +L S L + S+ S N S +
Sbjct: 397 KRSHIQTFLESM-----SPKDKVIVFVSRKAVADHLSSDLILQHISVESLHGNREQSDRE 451
Query: 473 NSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSG 530
++E K V ++ +++ L+ ++V V DF +++ YV + R +G
Sbjct: 452 RALE--NFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTG 509
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+ + T++D A ++I ILE+ Q +P+ L
Sbjct: 510 VSITLLTRNDWRVANELINILERANQSIPEDL 541
>gi|391343747|ref|XP_003746167.1| PREDICTED: probable ATP-dependent RNA helicase DDX17, partial
[Metaseiulus occidentalis]
Length = 664
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 31/366 (8%)
Query: 216 SAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTG-PFLLFLVSSQEKAAKV 272
S +D+ + +GS T+ A+ + G+ G P +L L ++E A ++
Sbjct: 100 SGRDMVGIAQTGSGKTL---AYTLPAIVHIWGNNGHRGYRPPGSPMVLILAPTRELAQQI 156
Query: 273 RSVCKPL-KAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVSTPERLLKLVSLKAIDVSG 330
+ V + GI +V + GA Q+ + R CE ++TP RL+ + + +
Sbjct: 157 QQVAADFGRGAGIKSVCIFGGAPKGGQLREIDRGCE--ICIATPGRLIDFLESGKLSLRR 214
Query: 331 -VSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSINRL 387
S LV+D D + IR+ I+ +P T+ V A+ L +L
Sbjct: 215 RCSYLVLDEADRMLDMGFEPQIRKIINQIRPDAQTLMWSATWPKEVKALAEDYLKDYVQL 274
Query: 388 SLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
++ S + I Q V+VC S+EEK K I L + + + KVL K
Sbjct: 275 NIGALSLSANHKITQMVDVC-SEEEKEEKLI-ALQRKFCE---EKDAKVLIFAETKKKVD 329
Query: 448 NLVSTLK-CKGYSISTGSNCIVSHIKNSVEAD----GRKRPAVSMIDKDHISTAELE--E 500
+L L+ C ++IS + K+ E D G + +++ ++ L+ +
Sbjct: 330 DLSMRLRHCGFHAISIHGD------KSQQERDWVLQGFRNGECNILVATDVAARGLDVDD 383
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPD 560
V+ D+ S ++Y+ + AR +G +FFT +A A +I +L++ GQ+V
Sbjct: 384 IRYVVNYDYPHSSEDYIHRIGRTARSNNTGTAFTFFTNANAKQARDLIGVLKEAGQLVTP 443
Query: 561 ALRDLC 566
L L
Sbjct: 444 ELYQLA 449
>gi|349609420|ref|ZP_08888815.1| hypothetical protein HMPREF1028_00790 [Neisseria sp. GT4A_CT1]
gi|348611981|gb|EGY61609.1| hypothetical protein HMPREF1028_00790 [Neisseria sp. GT4A_CT1]
Length = 457
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 177 KFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQI 233
KF L L+ I +A+R +G E P + + I F +DI+ + +GS T
Sbjct: 4 KFADLNLDKNILSAVRSEGYESPTP--IQAQAIPF---ALEGRDIMASAQTGSGKTA--- 55
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR----SVCKPLKAFGIHTVSL 289
A+++ T R EK G GP L L ++E AA+V + K ++ F TVS+
Sbjct: 56 AFLLPTLQRLTKRSEKPG---KGPRALVLTPTRELAAQVEKNALAYAKNMRWF--RTVSI 110
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GA+ +Q L S + +V+TP RL+ L+ +D + + +L++D D +
Sbjct: 111 VGGASFGYQTRAL-SKPVDLIVATPGRLMDLMQSGKVDFARLEVLILDEADRM 162
>gi|319638186|ref|ZP_07992949.1| ATP-dependent RNA helicase [Neisseria mucosa C102]
gi|317400459|gb|EFV81117.1| ATP-dependent RNA helicase [Neisseria mucosa C102]
Length = 469
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 177 KFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQI 233
KF L L+ I +A+R +G E P + + I F +DI+ + +GS T
Sbjct: 4 KFADLNLDKNILSAVRSEGYESPTP--IQAQAIPF---ALDGRDIMASAQTGSGKTA--- 55
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR----SVCKPLKAFGIHTVSL 289
A+++ T R EK G GP L L ++E AA+V + K ++ F TVS+
Sbjct: 56 AFLLPTLQRLTKRSEKPG---KGPRALVLTPTRELAAQVEKNALAYAKNMRWF--RTVSI 110
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GA+ +Q L S + +V+TP RL+ L+ +D + + +L++D D +
Sbjct: 111 VGGASFGYQTRAL-SKPVDLIVATPGRLMDLMQSGKVDFARLEVLILDEADRM 162
>gi|358009896|ref|ZP_09141706.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. P8-3-8]
Length = 383
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 138/337 (40%), Gaps = 28/337 (8%)
Query: 234 AWIVATAADSIARKEKEGFSFTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHP 291
A++V+ D + KE F G P L L ++E A ++ + K L F ++ V+L
Sbjct: 56 AFLVSIINDLLNNPIKEQ-RFRGEPRALILAPTRELAIQIENDAKDLVKFSNLNVVTLVG 114
Query: 292 GAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI 351
G D Q L + +V+TP RL+ K + + + LV+D D L + +
Sbjct: 115 GVDFDKQKKQLNQNFVDIIVATPGRLIDFTEQKEVWLDQIEFLVIDEADRLLDMGFIPSV 174
Query: 352 RQSISGKP-----HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNV 406
++ + P T++F+ +Y + Q L + + +A + Q V V
Sbjct: 175 KRIVRFSPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVT--VEIEPEKKTNADVEQRVYV 232
Query: 407 CA-SDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGS 464
D+ K+L+ I EP+ KV+ + + + L LK GY + S
Sbjct: 233 VEKKDKYKLLRQI----------LADEPIEKVMIFANRRDQVRKLYDHLKADGYKVVMLS 282
Query: 465 NCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTS 522
I + + + MI D ++ + V V +F + + +YV +
Sbjct: 283 GEIAQDKRLKMLDQFKNGQHNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGR 341
Query: 523 MARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
R G+ SF ++DDA + + EI + GQ +P
Sbjct: 342 TGRAGTQGVSISFLSEDDAFY---LPEIEKAIGQKLP 375
>gi|380027510|ref|XP_003697466.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 623
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 136/327 (41%), Gaps = 36/327 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT----VSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ V FGI + + GA Q L E +
Sbjct: 184 GPIALILAPTRELAQQIQQVAS---DFGISSQVRNTCIFGGAPKGPQARDLERGV-EICI 239
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 240 ATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATW 299
Query: 371 TSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
V+NL L ++++ + + I+Q V+VC + EK K +++L+
Sbjct: 300 PK--EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVC-EEYEKEGKLMKLLEE---- 352
Query: 428 HFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEAD 478
+EP K + V K ++ + G+ + +++ +NS
Sbjct: 353 -ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNS---- 407
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
R A+ + ++E+ + VI D+ + ++YV + R +G ++FFT
Sbjct: 408 ---RSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTP 464
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDL 565
+A A +I++LE+ QVV L +L
Sbjct: 465 GNAHKASDLIQVLEEAKQVVNPKLYEL 491
>gi|75076425|sp|Q4R6M5.1|DDX5_MACFA RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|67969804|dbj|BAE01250.1| unnamed protein product [Macaca fascicularis]
Length = 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 132/315 (41%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ + V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|346972098|gb|EGY15550.1| ATP-dependent RNA helicase DBP3 [Verticillium dahliae VdLs.17]
Length = 603
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 129/297 (43%), Gaps = 22/297 (7%)
Query: 282 FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS 341
G+ +V ++ GA+ D Q L+ + +V+TP RL +S +D+S V+D D
Sbjct: 279 LGLKSVCVYGGASKDEQRALLQRGA-DIIVATPGRLKDFMSDGTVDLSHSRFAVLDEADR 337
Query: 342 LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL------------LGSINRLSL 389
+ I+ + P + + PA LL +GS + +
Sbjct: 338 MLDKGFEDDIKAILGAMPAREARQTLMFTATWPASVRLLASSFMVDPVKITIGSGGKETA 397
Query: 390 NQSVASQSAC-IIQSVNVC-ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQ 447
+ +V Q+ I Q V V D+E+ L +Q+L + + V + K++
Sbjct: 398 SGAVELQANTRITQRVEVVDGRDKEQRL--LQILRQYQAGQGRRDRILVFCLYKKEAT-- 453
Query: 448 NLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVI 505
+ + L+ +G + G + + + + + K A S++ ++ L+ E ++V+
Sbjct: 454 RVEAFLQQRGIHVC-GIHGDLRQDQRTRSLEAFKSGATSVMVATDVAARGLDIPEVKLVV 512
Query: 506 VPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
F +++++YV + R +G + FT D AH+G +I IL+ Q VPD L
Sbjct: 513 NVTFPLTIEDYVHRIGRTGRAGKTGEAITLFTVQDKAHSGSLINILKGANQPVPDEL 569
>gi|345324427|ref|XP_001510775.2| PREDICTED: probable ATP-dependent RNA helicase DDX5
[Ornithorhynchus anatinus]
Length = 614
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 460 LREANQAINPKLLQL 474
>gi|328779158|ref|XP_001122489.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
mellifera]
Length = 616
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 136/328 (41%), Gaps = 36/328 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT----VSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ V FGI + + GA Q L E +
Sbjct: 183 GPIALILAPTRELAQQIQQVAS---DFGISSQVRNTCIFGGAPKGPQARDLERGV-EICI 238
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 239 ATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATW 298
Query: 371 TSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
V+NL L ++++ + + I+Q V+VC + EK K +++L+
Sbjct: 299 PK--EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVC-EEYEKEGKLMKLLEE---- 351
Query: 428 HFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEAD 478
+EP K + V K ++ + G+ + +++ +NS
Sbjct: 352 -ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNS---- 406
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
R A+ + ++E+ + VI D+ + ++YV + R +G ++FFT
Sbjct: 407 ---RSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTP 463
Query: 539 DDAAHAGQMIEILEQCGQVVPDALRDLC 566
+A A +I++LE+ QVV L +L
Sbjct: 464 GNAHKASDLIQVLEEAKQVVNPKLYELS 491
>gi|167894911|ref|ZP_02482313.1| ATP-dependent RNA helicase [Burkholderia pseudomallei 7894]
Length = 483
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 138 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 193
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 194 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 253
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 254 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 306
>gi|167739208|ref|ZP_02411982.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 14]
Length = 460
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 135 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 190
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCL 368
+TP RLL + ID+S + +LV+D D + + I ++ P T++F+ L
Sbjct: 191 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATL 250
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 251 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 303
>gi|389720718|ref|ZP_10187537.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. HA]
gi|388609402|gb|EIM38574.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. HA]
Length = 383
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 134/335 (40%), Gaps = 24/335 (7%)
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPG 292
A++V+ D + +E P L L ++E A ++ S L F + V+L G
Sbjct: 56 AFLVSIINDLLNNPVQEQRYRGEPRALILAPTRELALQIESDAHELNKFTDLSVVTLLGG 115
Query: 293 AAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR 352
D Q L + +V+TP RL+ V K + + + LV+D D L + ++
Sbjct: 116 VDFDKQKAQLDKAPVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVK 175
Query: 353 QSISGKP-----HTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC 407
+ + P T++F+ +Y + Q L + + + + + + V
Sbjct: 176 RIVRFSPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVT-VEIEPEKKTNADVEQRVYMVA 234
Query: 408 ASDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNC 466
+D+ K+L+ I EP+ KV+ + + + L LK Y + S
Sbjct: 235 KADKYKLLQDI----------LRDEPIEKVMIFANRRDQVRKLYDHLKRDNYKVVMLSGE 284
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMA 524
I + + + MI D ++ + V V +F + + +YV +
Sbjct: 285 IAQDKRLKMLDQFKNGKHNIMIATD-VAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTG 343
Query: 525 RHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
R G+ SF ++DDA + + EI + GQ +P
Sbjct: 344 RAGTRGVSISFLSEDDAFY---LPEIEKAIGQKLP 375
>gi|357625037|gb|EHJ75591.1| hypothetical protein KGM_15102 [Danaus plexippus]
Length = 452
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 159/382 (41%), Gaps = 34/382 (8%)
Query: 199 NPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFSF 254
NP + + G W S +D+ + +GS T+ I A + + R E
Sbjct: 50 NPTPIQAQG---WPIALSGRDMVGIAQTGSGKTLAYILPAIVHIINQPRLLRDE------ 100
Query: 255 TGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVST 313
GP +L L ++E A ++++V ++ + + GA Q L E +++T
Sbjct: 101 -GPIVLVLAPTRELAQQIQTVANEFGQSVQVRNTCIFGGAPKGPQGRTLERGV-EIVIAT 158
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS 372
P RL+ + ++ + LV+D D + IR+ I +P V T+
Sbjct: 159 PGRLIDFLEKDTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPK 218
Query: 373 VPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
VQNL L ++++ S + I+Q V+VC + EK K + +L +
Sbjct: 219 --EVQNLAEEFLHDYIQINIGSLSLSANHNILQIVDVC-EEWEKNDKLLTLLTEISSE-- 273
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAVS 486
E K + K ++ ++ G+ SI N ++ V A R
Sbjct: 274 --EETKTIIFAETKRKVDDITKSINRAGWRALSIHGDKN---QQDRDYVLAQFRSSRTAI 328
Query: 487 MIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAG 545
++ D + ++E+ + VI D+ + ++YV + R +G ++ FT +++A A
Sbjct: 329 LVATDVAARGLDVEDVKFVINYDYPNNSEDYVHRIGRTGRSHNTGTAYTLFTPNNSAKAK 388
Query: 546 QMIEILEQCGQVVPDALRDLCH 567
++ +L++ QVV L +L
Sbjct: 389 DLLSVLQEANQVVNPKLLELAQ 410
>gi|341884922|gb|EGT40857.1| hypothetical protein CAEBREN_11776 [Caenorhabditis brenneri]
Length = 518
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 173/406 (42%), Gaps = 44/406 (10%)
Query: 185 AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATA-- 240
AI N ++ +G ++ +P+ W I S +D + S GS T+ A+++
Sbjct: 95 AIMNEIKKNGFDKPSPIQAQMWPILL-----SGQDCIGVSQTGSGKTL---AFLLPAFLH 146
Query: 241 ADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT 300
D+ ++ P +L L ++E A ++ + G +V L+ G + Q+
Sbjct: 147 IDAQYKQYDANEKKPSPSVLVLSPTRELAQQIEGEVQKYSYNGYKSVCLYGGGSRKEQVD 206
Query: 301 GLRSCEP--EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISG 357
SC+ E +++TP RL L + I ++ V+ +V+D D L G ++ R
Sbjct: 207 ---SCKGGIEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEAAIRRILFEI 263
Query: 358 KPHTVV-------------FNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQ 402
+P +V D T ++ AV L ++ ++++L Q + QS +
Sbjct: 264 RPDRLVALTSATWPEGVRKLTDRYTKQAIMAVNGSLDLTVIKSQMTLLQLICFQSCKTVT 323
Query: 403 SVNVCASDE---EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYS 459
E +++ + + L+ A+G ++ K++ V +L S KG +
Sbjct: 324 QFFEFVPHENRFDRVCEIVNFLNTAHGKNY-----KMIIFVKSKVMADHLSSDFCMKGIN 378
Query: 460 ISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYV 517
S G + S + + V ++ +++ ++ ++ V+ DF + ++ YV
Sbjct: 379 -SQGLHGGRSQTDRELSLKMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYV 437
Query: 518 EILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
+ R +G SF +D ++ +I ILE+ GQ VP+ LR
Sbjct: 438 HRVGRTGRAGRNGEAMSFMWWNDRSNFEGLISILEKSGQEVPEQLR 483
>gi|344288523|ref|XP_003415998.1| PREDICTED: probable ATP-dependent RNA helicase DDX53-like
[Loxodonta africana]
Length = 628
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 143/322 (44%), Gaps = 35/322 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C G+ ++ ++ G + QI + + +++TP
Sbjct: 296 GPGMLVLTPTRELALQVEAECCKYSYKGLKSICIYGGGNREAQIHDIAKGV-DIIIATPG 354
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPH------TVVFNDCL 368
RL L +++ ++ LV+D D L G +++ + +P + + D +
Sbjct: 355 RLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTIMTSATWPDSV 414
Query: 369 -----TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
+Y P + + +G+++ L++N + Q N+ + EEK +Q
Sbjct: 415 RRVAQSYLKDPMI--VYVGTLDLLAVN--------TVKQ--NIIVTTEEKKRSLLQEFLE 462
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKR 482
+ S KV+ V + +L S L +G + S N S + ++ D KR
Sbjct: 463 SL-----SPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGNGEQSDREQAL--DDFKR 515
Query: 483 PAVSMIDKDHISTAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
V ++ +++ L+ ++ V DF +++ YV + R SG + T+DD
Sbjct: 516 EKVKILIATDLASRGLDVQDITHVYNYDFPQNIEEYVHRVGRTGRAGKSGTSVTLITQDD 575
Query: 541 AAHAGQMIEILEQCGQVVPDAL 562
A ++I+IL++ Q VPD L
Sbjct: 576 WKIANELIKILKRANQFVPDEL 597
>gi|375144587|ref|YP_005007028.1| DEAD/DEAH box helicase [Niastella koreensis GR20-10]
gi|361058633|gb|AEV97624.1| DEAD/DEAH box helicase domain protein [Niastella koreensis GR20-10]
Length = 380
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 217 AKDILETS--GSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRS 274
KDIL S GS T + I+ + +K++ +L +V ++E A +V
Sbjct: 38 GKDILGISKTGSGKTAGYVLPILELCQRRVEKKDRH------VRVLVIVPTRELAIQVSD 91
Query: 275 VCKPLKAF---GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGV 331
VCK A I T++++ G +I+ Q+ L E L++TP RLL L+ KA+ +S V
Sbjct: 92 VCKTFCAHLPNKIKTMAVYGGVSINPQMMALHGIE--ILIATPGRLLDLIDHKAVHLSQV 149
Query: 332 SLLVVDRLDSL 342
+LV+D D +
Sbjct: 150 EILVLDEADKM 160
>gi|345493220|ref|XP_001605420.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like isoform 1
[Nasonia vitripennis]
Length = 777
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 154/367 (41%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 144 WPIALSGRDMVGIAQTGSGKTLAYI--LPATVHINNQPRLSRG---DGPIVLVLAPTREL 198
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A +++SV + FG I + G+ Q L E ++TP RL+ +
Sbjct: 199 AQQIQSVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLERG 254
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 255 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLT 314
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
++++ + + I Q + +C E++ + VL G + K + V
Sbjct: 315 DYIQINIGSLNLAANHNIRQIIEICQEHEKE--NKLAVLLREIGCERGN---KTIIFVET 369
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
K ++ +K G+ ++ V ++ R ++ D + ++E+
Sbjct: 370 KKKVDDITKAIKRNGWPAIAIHGDKSQPERDYVLSEFRNGKTAILVATDVAARGLDVEDV 429
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+ V+ D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ++
Sbjct: 430 KYVVNFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQIINPQ 489
Query: 562 LRDLCHT 568
L ++ ++
Sbjct: 490 LAEMANS 496
>gi|392568072|gb|EIW61246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 830
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 157/369 (42%), Gaps = 36/369 (9%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S +D++ +GS TI + + D ++ EG P + + ++E A ++
Sbjct: 206 SGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEQMEG-----PVAVIMTPTRELAVQIH 260
Query: 274 SVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVS 329
CKP L+ + V + G+ I QI ++ E +V TP R++ L+ S + ++
Sbjct: 261 RECKPFLRVLNLRAVCAYGGSPIKDQIAEMKKGA-EIIVCTPGRMIDLLTANSGRVTNLK 319
Query: 330 GVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINR 386
V+ LV+ DR+ + + I +I TV+F+ + P + L I R
Sbjct: 320 RVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFS-----ATFPRQMDSLARKILR 374
Query: 387 LSLNQSVASQS--ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEP-LKVLYIVGKD 443
L +V +S A I+ + ++ K + +++L G ++ +P + L V +
Sbjct: 375 KPLEITVGGRSVVAPEIEQIVEVRDEDSKFNRLLEIL----GQTYNEDPECRTLIFVDRQ 430
Query: 444 SKFQNLVSTLKCKGY---SISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE- 499
NL+ L KGY S+ G + + ++S AD K V ++ ++ L+
Sbjct: 431 EGADNLLRELMRKGYLCMSLHGGKDQV---DRDSTIADF-KSGVVPVVIATSVAARGLDV 486
Query: 500 -EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVV 558
+ ++VI D M++YV R G +F T + ++ + L+ +
Sbjct: 487 KQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQDRYSVDIYRALQASSAAM 546
Query: 559 PDALRDLCH 567
P L L +
Sbjct: 547 PKELETLAN 555
>gi|281212472|gb|EFA86632.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 728
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 26/318 (8%)
Query: 256 GPFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEP-----EF 309
GP LF+ ++E A ++ K K + I T ++ G +T L C E
Sbjct: 326 GPIALFVAPTRELAHQIYLETQKFAKPYKIRTSVIYGG------VTKLLQCRELKAGCEI 379
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFND 366
LV+TP RL+ ++ LKA ++ V+ LV+ DR+ + G + I I T++F+
Sbjct: 380 LVTTPGRLIDMIKLKATKMNRVTYLVLDEADRMFDMGFGPQVQSIVGQIRPDRQTLLFSA 439
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+N+L+ I R+S+ + S + I Q+V V +S+ EK IQ L
Sbjct: 440 TFPPNIEELARNILIDPI-RISIGNT-GSANQDITQNVIVLSSNGEKWNWLIQRLPSLVS 497
Query: 427 DHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVS 486
V+ V L L G+ S G + + ++ + K +V
Sbjct: 498 QG------NVIIFVSTKVAVDELSMNLVKFGFP-SEGLHGDKDQQERTMIINKFKDGSVP 550
Query: 487 MIDKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ ++ L+ + V +F S + ++ + R GI ++ T D +
Sbjct: 551 ILVATDVAARGLDINLIRNVVNFDPSRDIDSHTHRIGRTGRAGTQGIAYTLITPKDIHFS 610
Query: 545 GQMIEILEQCGQVVPDAL 562
++++ LE+ Q+VP L
Sbjct: 611 AELVKHLEEANQIVPPEL 628
>gi|340362171|ref|ZP_08684568.1| ATP-dependent RNA helicase RhlE [Neisseria macacae ATCC 33926]
gi|339887772|gb|EGQ77294.1| ATP-dependent RNA helicase RhlE [Neisseria macacae ATCC 33926]
Length = 457
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 177 KFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQI 233
KF L L+ I +A+R +G E P + + I F +DI+ + +GS T
Sbjct: 4 KFADLNLDKNILSAVRSEGYESPTP--IQAQAIPF---ALEGRDIMASAQTGSGKTA--- 55
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR----SVCKPLKAFGIHTVSL 289
A+++ T R EK G GP L L ++E AA+V + K ++ F TVS+
Sbjct: 56 AFLLPTLQRLTKRSEKPG---KGPRALVLTPTRELAAQVEKNALAYAKNMRWF--RTVSI 110
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GA+ +Q L S + +V+TP RL+ L+ +D + + +L++D D +
Sbjct: 111 VGGASFGYQTRAL-SKPVDLIVATPGRLMDLMQSGKVDFARLEVLILDEADRM 162
>gi|194387478|dbj|BAG60103.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 156 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 214
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 215 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 274
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 275 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 331
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 332 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 388
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 389 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 448
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 449 LREANQAINPKLLQL 463
>gi|402217906|gb|EJT97985.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 606
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 164/416 (39%), Gaps = 34/416 (8%)
Query: 160 CANGHHGQACEKLDCPSKFLILCLNAIE-------NAMRHDGVEQDNPLFVNSWGIEFWK 212
NGH +L P +L +E N +R G P+ +W I
Sbjct: 120 LGNGHEPGGATELRKP----VLTFEELECIPQELHNTLRKTGFPTPTPIQAQTWPIVL-- 173
Query: 213 CYSSAKDIL--ETSGSSSTI----VQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQ 266
S KD++ +GS T+ IA + A + + GF + P L L ++
Sbjct: 174 ---SGKDLIGVAQTGSGKTLSYILPAIAHLRAQPSWRPGQSTSSGFGIS-PSALILAPTR 229
Query: 267 EKAAKVRS-VCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKA 325
E A ++ + K + + + V ++ GA Q+ LR + +V+TP RL L+
Sbjct: 230 ELATQIAAEAGKYMLSCRMAVVPVYGGADKRMQMNNLRRGA-DVVVATPGRLNDLIQSNI 288
Query: 326 IDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPAVQNLLLG 382
+++S +S LV+D D + IRQ + P T+++ + T VQ+L
Sbjct: 289 LNLSRISYLVMDEADRMLDMGFEPQIRQIVEHLPPNRQTLLW----SATWPKEVQSLARD 344
Query: 383 SINRLS-LNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVG 441
IN ++ +V S ++V E K + + +H + K++ VG
Sbjct: 345 FINPGGHVHVTVGSHELEANKNVLQRTEHVESSGKPMALQNHLVRILTAQKQAKIIIFVG 404
Query: 442 KDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEE 500
L L GY + T ++ R A ++ D + ++++
Sbjct: 405 TKLTADMLHQGLSQGGYPVVTIHGDKTQDARDRSIGHFRAGKAQVLVATDVCARGLDVKD 464
Query: 501 YEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
VI D + ++YV + R G SF T +DA A +I+++E GQ
Sbjct: 465 VHTVINYDIPNNPEDYVHRIGRTGRAGSKGEALSFLTDEDAPRADGLIKVIESAGQ 520
>gi|323143379|ref|ZP_08078066.1| cold-shock DEAD-box protein A [Succinatimonas hippei YIT 12066]
gi|322416845|gb|EFY07492.1| cold-shock DEAD-box protein A [Succinatimonas hippei YIT 12066]
Length = 683
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 258 FLLFLVSSQEKAAKVRSVCKPLKAFG-----IHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
F L L ++E A +V + +AF H V ++ GA+ D+QI +R + +V+
Sbjct: 123 FALVLEPTRELALQV---AESFQAFARHIEDFHVVPIYGGASYDNQIRSIRHGA-QVVVA 178
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKG---DTLSLIRQSISGKPHTVVFNDCL 368
TP RL+ L+ ID+S VS +V+D D + + D + I + HT +F+ +
Sbjct: 179 TPGRLIDLIERGKIDLSSVSYMVIDEADEMLRMGFIDDVDWILNHTPSERHTALFSATM 237
>gi|345493222|ref|XP_003427025.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like isoform 2
[Nasonia vitripennis]
Length = 710
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 154/367 (41%), Gaps = 23/367 (6%)
Query: 211 WKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S +D+ + +GS T+ I + AT + + G GP +L L ++E
Sbjct: 77 WPIALSGRDMVGIAQTGSGKTLAYI--LPATVHINNQPRLSRG---DGPIVLVLAPTREL 131
Query: 269 AAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLK 324
A +++SV + FG I + G+ Q L E ++TP RL+ +
Sbjct: 132 AQQIQSVAR---DFGSSSCIRNTCIFGGSPKGPQARDLERGV-EICIATPGRLIDFLERG 187
Query: 325 AIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAVQNLLLG 382
++ + LV+D D + IR+ I +P V T+ V A+ L
Sbjct: 188 TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLT 247
Query: 383 SINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGK 442
++++ + + I Q + +C E++ + VL G + K + V
Sbjct: 248 DYIQINIGSLNLAANHNIRQIIEICQEHEKE--NKLAVLLREIGCERGN---KTIIFVET 302
Query: 443 DSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEY 501
K ++ +K G+ ++ V ++ R ++ D + ++E+
Sbjct: 303 KKKVDDITKAIKRNGWPAIAIHGDKSQPERDYVLSEFRNGKTAILVATDVAARGLDVEDV 362
Query: 502 EVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDA 561
+ V+ D+ S ++Y+ + R +G +++FT ++A A ++I +LE+ GQ++
Sbjct: 363 KYVVNFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQIINPQ 422
Query: 562 LRDLCHT 568
L ++ ++
Sbjct: 423 LAEMANS 429
>gi|167837073|ref|ZP_02463956.1| ATP-dependent RNA helicase [Burkholderia thailandensis MSMB43]
Length = 475
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIH-----TVSLHPGAAIDHQITGLRSCEPEFLV 311
P LL L ++E A +V + +G H TVS+ G A Q+ L + PE LV
Sbjct: 134 PGLLVLTPTRELAMQVTTAAS---TYGKHLRRLRTVSILGGVAYGQQLM-LLAKNPEILV 189
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCL 368
+TP RLL + ID+S + +LV+D D L G D + I + T++F+ L
Sbjct: 190 ATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPASRQTMLFSATL 249
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
+ ++ N LL R+ + Q + S+S I Q+V+ + K ++LDH D
Sbjct: 250 D-GKIGSLTNRLLKDPERIEITQKIESRS-NIAQTVHYVDDRDHK----DRLLDHLLRD 302
>gi|403159344|ref|XP_003319970.2| hypothetical protein PGTG_00882 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168055|gb|EFP75551.2| hypothetical protein PGTG_00882 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 711
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 43/67 (64%)
Query: 497 ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQ 556
++ + E VI F +++++Y+ + R +G ++FT +D +HAG+++ +L+ GQ
Sbjct: 588 DIPKVEFVINVTFPLTIEDYIHRIGRTGRAGRTGKSITYFTDEDKSHAGELMRVLKDAGQ 647
Query: 557 VVPDALR 563
VVP+AL+
Sbjct: 648 VVPEALK 654
>gi|145351012|ref|XP_001419882.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580115|gb|ABO98175.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 440
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 13/313 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCE-PEFLVSTP 314
P L L ++E A + V +A G+ V ++ GA Q +++ +V+TP
Sbjct: 100 PICLVLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATP 159
Query: 315 ERLLKLVSLKAIDVSGVSLLVVD---RLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYT 371
RL + I + V++LV+D R+ L + I + TV+F+ +
Sbjct: 160 GRLRDFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAIAGATRADRQTVMFSATWPQS 219
Query: 372 SVPAVQNLLLGSIN-RLSLNQSVASQSACIIQSVNVC-ASDEEKILKGIQVLDHAYGDHF 429
+ I R+ ASQS I Q V V D+++ L +V+ G
Sbjct: 220 VQSLASEFMCNPIKVRIGAEGLKASQS--ITQIVEVVEPQDKDRHLA--RVMKQYLGKG- 274
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
P +++ + K + NL L + ++ + + SV+A + + +
Sbjct: 275 KEVPRTLIFGLYK-KECANLHQRLSREWPAVCIHGDMSQHDREKSVDAFKKGTSRILIAT 333
Query: 490 KDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
+++E E VI F ++ ++YV + R +G+ H+FFT D A AG+++
Sbjct: 334 DVAARGLDIKEVEYVINYTFPLTTEDYVHRIGRTGRAGATGLAHTFFTLHDKARAGELVN 393
Query: 550 ILEQCGQVVPDAL 562
+L + G VP+ L
Sbjct: 394 VLRKAGAEVPEEL 406
>gi|150019837|ref|YP_001312091.1| DEAD/DEAH box helicase [Clostridium beijerinckii NCIMB 8052]
gi|149906302|gb|ABR37135.1| DEAD/DEAH box helicase domain protein [Clostridium beijerinckii
NCIMB 8052]
Length = 525
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
L L ++E A +V + L + I T++++ G +ID QI LR + + +V TP R+L
Sbjct: 75 LILAPTRELAVQVNEEIQRLSKYEKIVTLAVYGGDSIDRQIRALRKGDVDIVVGTPGRIL 134
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP---HTVVFNDCLTYTSVPA 375
LV K + + + LV+D D + + I++ +S P T++F+ +
Sbjct: 135 DLVKRKCLHLESIEFLVLDEADEMLNMGFIDDIQEILSHTPSERQTLLFSATMPDPIAKL 194
Query: 376 VQNLL-----LGSINRLSLNQSVASQSACII 401
+ + L SI R SL S QS +I
Sbjct: 195 AKKYMKPDAKLVSIKRSSLTVSKIEQSYFMI 225
>gi|389613443|dbj|BAM20070.1| DEAD box ATP-dependent RNA helicase, partial [Papilio xuthus]
Length = 388
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 200 PLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGP 257
P + S G W S K++ + +G+ T+ A+++ + KEK+G GP
Sbjct: 120 PTIIQSQG---WPVALSGKNLVGIAQTGTGKTL---AYLLPAV---VHIKEKQGRRSKGP 170
Query: 258 FLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
+L L ++E A ++ V K + + + +H GA Q L+ + L++TP R
Sbjct: 171 RVLVLAPTRELARQIEEVAKEFETLLNVRCLCIHGGANRGPQAAALKEG-VDILIATPGR 229
Query: 317 LLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPH--TVVFNDCLTYTSVP 374
L ++ K ++ + +V+D D + IR+++ PH ++ V
Sbjct: 230 LNDFINSKTTTLTRCTYVVLDEADRMLDMGFEPQIREALEEVPHERQILMFSATWPKEVE 289
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE 412
+ LG ++++ + S + I Q+ ++C DE+
Sbjct: 290 HLAKDYLGEFIQVNVGSTELSANXNIQQNFHICEQDEK 327
>gi|50405707|ref|XP_456492.1| DEHA2A03454p [Debaryomyces hansenii CBS767]
gi|74659594|sp|Q6BZ77.1|DBP3_DEBHA RecName: Full=ATP-dependent RNA helicase DBP3
gi|49652156|emb|CAG84444.1| DEHA2A03454p [Debaryomyces hansenii CBS767]
Length = 527
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 164/367 (44%), Gaps = 36/367 (9%)
Query: 211 WKCYSSAKDILET--SGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEK 268
W S KD++ +GS T A+ V A ++I +K+G +L + ++E
Sbjct: 148 WPYLLSGKDVIGVAETGSGKTF---AFGVP-AINNILTHDKKGLK-----VLCISPTREL 198
Query: 269 AAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
A ++ L A + V+++ G + Q++ LR+ +V+TP RL+ L++ A+
Sbjct: 199 ALQIYDNLVDLTANTPLKCVAVYGGVSKHEQVSSLRNAS--VVVATPGRLIDLLNDGALS 256
Query: 328 VSGVSLLVVDRLDS-LSKG---DTLSLIRQSISGKPHTVVFNDC-------LTYTSVPAV 376
+ + LV+D D L KG D S+++Q+ T++F L T + +
Sbjct: 257 LDSIEYLVLDEADRMLEKGFEQDIKSVMQQTNHANRQTLMFTATWPKEVRELASTFMNSP 316
Query: 377 QNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKV 436
+ +G N LS N+ + +Q +I+ + E+K+L ++ + G + + L
Sbjct: 317 VKVSIGDRNELSANKRI-TQIVEVIEPYD----KEKKLLSLLR--KYQSGSNKDDKVLIF 369
Query: 437 LYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA 496
+ ++ +NL L + +S + + S + ++ D +
Sbjct: 370 ALYKKEATRIENL---LVRNSFKVSAVHGDLSQQQRTSALGAFKAGKTTLLLATDVAARG 426
Query: 497 -ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCG 555
++ +VVI F +++++YV + R +GI H+ FT+ + +G ++ +L
Sbjct: 427 LDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLSGALMNVLRGAN 486
Query: 556 QVVPDAL 562
Q VPD L
Sbjct: 487 QPVPDEL 493
>gi|365875004|ref|ZP_09414534.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
Ag1]
gi|442589352|ref|ZP_21008160.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
R26]
gi|365757116|gb|EHM99025.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
Ag1]
gi|442560962|gb|ELR78189.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
R26]
Length = 560
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 284 IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-L 342
I TV+++ G++I+ QI LR +P+ +V TP R++ L++ K++D S + LV+D D L
Sbjct: 101 IKTVAVYGGSSINDQIRSLRE-KPQIIVGTPGRVIDLINRKSLDFSNIHWLVLDEADEML 159
Query: 343 SKG--DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLL-------LGSINRLSLN 390
S G D L I T +F+ ++ +N L +GSIN + N
Sbjct: 160 SMGFKDDLETIISETPETKQTFLFSATMSKEVERISKNYLTKPHRISVGSINEVKKN 216
>gi|340514037|gb|EGR44307.1| predicted protein [Trichoderma reesei QM6a]
Length = 522
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 126/295 (42%), Gaps = 28/295 (9%)
Query: 287 VSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGD 346
V L+ GA+ D Q L+ + +V+TP RL +S +D+SG V+D D +
Sbjct: 203 VCLYGGASKDDQRALLQKGA-DIIVATPGRLKDFMSDGTVDLSGCKFAVLDEADRMLDKG 261
Query: 347 TLSLIRQSISGKP-----HTVVFNDCLTYTSVPAVQNL-----------LLGSINRLSLN 390
I+ + P T++F T T +VQ+L +GS + + N
Sbjct: 262 FEEDIKMILGACPPREERQTLMF----TATWPTSVQSLASTFMVDPVKITIGSRGKETEN 317
Query: 391 QSVASQSAC-IIQSVNVC-ASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQN 448
SV Q+ I Q V V D+E L +Q++ + + V + K++
Sbjct: 318 GSVELQANTRITQRVEVLDGRDKETRL--LQIIKQHQQGKQKDDRILVFCLYKKEA--TR 373
Query: 449 LVSTLKCKGYSISTGSNCIVSHIKN-SVEADGRKRPAVSMIDKDHISTAELEEYEVVIVP 507
+ S L KG + + + S+EA + V + ++ E ++VI
Sbjct: 374 VESFLARKGVRVGGIHGDLKQEQRTRSLEAFKTGKTPVLVATDVAARGLDIPEVKLVINV 433
Query: 508 DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
F +++++YV + R +G + FT D AH+G +I IL+ Q VPD L
Sbjct: 434 TFPLTIEDYVHRIGRTGRAGKTGEAITMFTVQDKAHSGSLINILKGANQPVPDEL 488
>gi|74149390|dbj|BAE22450.1| unnamed protein product [Mus musculus]
Length = 615
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 225
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 226 GRLIDFLECGKTNLRRTTYLVLDEGDRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 286 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 342
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 343 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 460 LREANQAI 467
>gi|209964196|ref|YP_002297111.1| DEAD/DEAH box helicase [Rhodospirillum centenum SW]
gi|209957662|gb|ACI98298.1| DEAD/DEAH box helicase protein [Rhodospirillum centenum SW]
Length = 528
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A++V + L FG I T ++ G Q+ LR + +V+TP
Sbjct: 81 GPRVLVLTPTRELASQVLESVRNLSKFGRIQTGTILGGMPYRQQLEMLRR-RVDLIVATP 139
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--DTLSLIRQSISGKPHTVVFNDCLTYT 371
RL+ + +D+SGV +LV+D D L G + + I + + T++F L T
Sbjct: 140 GRLMDHMERGRLDLSGVEVLVLDEADRMLDMGFREAVEFIAAACPAERQTLLFTATLDRT 199
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY------ 425
+ Q L R + VA ++ V A E++ L+ L+H +
Sbjct: 200 AERLAQTL-----TRDPVRIDVAGKAV-------VTAQVEQRWLRA-DGLEHKHRLLETL 246
Query: 426 --GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEA---DGR 480
G+ F K + + L TL KG+ + +N V DGR
Sbjct: 247 LGGEEFG----KGIVFIATKLDADRLADTLSEKGHKAMPLHGDMQQRDRNRVVQWLRDGR 302
Query: 481 KRPAVSM-IDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
V+ + I A+L VI D ++YV + R SG+ +S FT+
Sbjct: 303 INVIVATDVAARGIDIADLTH---VINFDLPKQAEDYVHRIGRTGRAGASGVSYSLFTR 358
>gi|221307593|ref|NP_001138306.1| probable ATP-dependent RNA helicase DDX5 [Pan troglodytes]
gi|156630859|sp|A5A6J2.1|DDX5_PANTR RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|146741418|dbj|BAF62365.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Pan troglodytes verus]
Length = 614
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 135/319 (42%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQIT----GLRSCEPEFL 310
GP L L ++E A +V+ V +A + + ++ GA QI G+ +C
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENC----- 221
Query: 311 VSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDC 367
++TP RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT 281
Query: 368 LTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
++ L I+ +++ S + I+Q V+VC D EK K I++++ +
Sbjct: 282 WPKEVRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSE 339
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
+ K + V + L ++ G+ ++ V + + A +
Sbjct: 340 KEN----KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
I D S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 547 MIEILEQCGQVVPDALRDL 565
+I +L + Q + L L
Sbjct: 456 LISVLREANQAINPKLLQL 474
>gi|403283252|ref|XP_003933040.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Saimiri
boliviensis boliviensis]
Length = 823
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 20/315 (6%)
Query: 260 LFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
L L ++E A +V+ V K + + ++ GA QI L E ++TP RL+
Sbjct: 340 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV-EICIATPGRLI 398
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-SVPAV 376
+ ++ + LV+D D + IR+ + +P T+ V +
Sbjct: 399 DFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 458
Query: 377 QNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKV 436
L ++++ S + I+Q V+VC + EK K IQ+++ + + K
Sbjct: 459 AEDFLRDYTQINVGNLELSANHNILQIVDVCM-ESEKDHKLIQLMEEIMAEKEN----KT 513
Query: 437 LYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG-----RKRPAVSMIDKD 491
+ V + +L ++ G+ + CI K+ E D R A +I D
Sbjct: 514 IIFVETKRRCDDLTRRMRRDGWP----AMCIHGD-KSQPERDWVLNEFRSGKAPILIATD 568
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++YV + AR T G ++FFT + A ++I++
Sbjct: 569 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 628
Query: 551 LEQCGQVVPDALRDL 565
LE+ Q + L L
Sbjct: 629 LEEANQAINPKLMQL 643
>gi|351729630|ref|ZP_08947321.1| dead/deah box helicase domain-containing protein [Acidovorax
radicis N35]
Length = 426
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 34/299 (11%)
Query: 260 LFLVSSQEKAAKVRSVCK--------PLKA---FGIHTVSLHPGAAIDHQITGLRSCEPE 308
L LV ++E AA+V V + PLK FG G +I+ Q+ GLR +
Sbjct: 77 LVLVPTRELAAQVGEVLRSLAQHLQQPLKVAIVFG--------GVSINPQMLGLRGGA-D 127
Query: 309 FLVSTPERLLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFN 365
+V+TP RLL LV A+ +S V+ LV+ DRL L + L+ + + + + F+
Sbjct: 128 IVVATPGRLLDLVEHNALRLSAVAHLVLDEADRLLDLGFAEELTRVLALLPAQRQNLFFS 187
Query: 366 DCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
+V A+ + LL + R+ + + ++ A +++ V A ++ Q+L H
Sbjct: 188 ATFP-AAVQALADGLLKNPVRVEVPHTPGNEPAIEQRAIAVDA------VRRTQLLRHLV 240
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
+H S +VL V +++ L G + + + V + +
Sbjct: 241 KEHSWS---RVLVFVATQYAAEHVAEKLYKAGIFATPFHGGLSQGARKQVLQEFKDERWQ 297
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
++ D + ++ + V+ D S +YV + R SG+ SF T D AH
Sbjct: 298 VVVTTDLAARGIDIAQLPAVVNYDLPRSAVDYVHRIGRTGRAGESGMAVSFVTADAEAH 356
>gi|419797020|ref|ZP_14322524.1| DEAD/DEAH box helicase [Neisseria sicca VK64]
gi|385698868|gb|EIG29205.1| DEAD/DEAH box helicase [Neisseria sicca VK64]
Length = 457
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 177 KFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQI 233
KF L L+ I +A+R +G E P + + I F +DI+ + +GS T
Sbjct: 4 KFADLNLDKNILSAVRSEGYESPTP--IQAQAIPF---ALEGRDIMASAQTGSGKTA--- 55
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR----SVCKPLKAFGIHTVSL 289
A+++ T R EK G GP L L ++E AA+V + K ++ F TVS+
Sbjct: 56 AFLLPTLQRLTKRSEKPG---KGPRALVLTPTRELAAQVEKNALAYAKNMRWF--RTVSI 110
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GA+ +Q L S + +V+TP RL+ L+ +D + +L++D D +
Sbjct: 111 VGGASFGYQTRAL-SKPVDLIVATPGRLMDLMQSGKVDFDRLEVLILDEADRM 162
>gi|449439149|ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
[Cucumis sativus]
Length = 1040
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 135/333 (40%), Gaps = 42/333 (12%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L + ++E ++ S K K G+ V ++ G+ + QI+ L+ E +V TP
Sbjct: 467 GPIGLIMAPTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGA-EIVVCTP 525
Query: 315 ERLLKLVSLKAIDVSG---VSLLVVDRLD---SLSKGDTLSLIRQSISGKPHTVVFNDCL 368
R++ ++ A ++ V+ LV+D D + ++ I Q+I TV+F+
Sbjct: 526 GRMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFS--- 582
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSAC---IIQSVNVCASDEEKILKGIQVLDHAY 425
+ P +L + + V +S I Q V V +E L
Sbjct: 583 --ATFPRQVEILARKVLNKPVEVQVGGRSVVNKDIAQLVEVRPENERF-----LRLLELL 635
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNCIVSHIKNSVEA 477
G+ + E K+L V K L L GY T +S K++V
Sbjct: 636 GEWY--EKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNV-- 691
Query: 478 DGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSF 535
+++ I+ L+ E E+VI D ++YV + R G +F
Sbjct: 692 -------CNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITF 744
Query: 536 FTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
++D+ +A +++ LE QVVPD LR L +
Sbjct: 745 IAEEDSRYAPDLVKALELSEQVVPDDLRALADS 777
>gi|339479083|gb|ABE95547.1| ATP-dependent RNA helicase [Bifidobacterium breve UCC2003]
Length = 675
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V PL AFG++T +++ G HQ+ L++ + +V+ P
Sbjct: 126 PRGLVLAPTRELANQINDVLMPLAHAFGMNTTTIYGGVKYIHQVRDLKAGT-DIVVACPG 184
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYTS 372
RL L+ KA+ +S V ++V+D D ++ L ++ + IS ++F+ L +
Sbjct: 185 RLEDLLRQKALTLSSVEVVVIDEADEMADMGFLPPVKRLLEQISPNAQHMLFSATLDH-G 243
Query: 373 VPAVQNLLL 381
V V N L
Sbjct: 244 VDEVVNTFL 252
>gi|124487974|gb|ABN12070.1| putative RNA-dependent helicase p68 [Maconellicoccus hirsutus]
Length = 328
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP +L L ++E A +++ V + + + + GAA Q L + E +++TP
Sbjct: 18 GPIVLVLAPTRELAQQIKIVASQYGTSTHVRSTCIFGGAAKGPQARDLMVGK-EIVIATP 76
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS- 372
RLL + A ++ + LV+D D + IR+ I +P V T+
Sbjct: 77 GRLLDFLQTNATNLRRTTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 136
Query: 373 -VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE-EKILKGIQVLDHAYGDHFH 430
++ L +L++ S + I Q ++VC DE E L G L G+
Sbjct: 137 VRTLAEDFLHKKYIQLNVGSLTLSANHNIRQHIDVCTEDEKENKLMG---LLEEIGNQ-- 191
Query: 431 SEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKN--SVEADGRKRPAVSMI 488
E K + K L ++ G + G + S S+ A R AV +
Sbjct: 192 -EENKTIVFAETKKKVDALTRKIRNAGVPV-VGIHGDKSQTDRDYSLNAFRSGRAAVLVA 249
Query: 489 DKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
++++ + VI DF S ++Y+ + R + +G ++FFTK+++ A ++
Sbjct: 250 TDVAARGLDVDDVKYVINYDFPNSSEDYIHRIGRTGRSSQTGTSYAFFTKNNSRLAKDLV 309
Query: 549 EILEQCGQVVPDALRDLC 566
+L++ Q V L ++
Sbjct: 310 NVLKEANQQVNPQLAEMA 327
>gi|296198571|ref|XP_002746771.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Callithrix
jacchus]
Length = 637
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 132/311 (42%), Gaps = 15/311 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
P +L L ++E A +V C G+ +V ++ G D QI LR + +++TP R
Sbjct: 306 PGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELRKGV-DIIIATPGR 364
Query: 317 LLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
L +++ ++ LV+D D L G +++ + +P +T + P
Sbjct: 365 LNDFQMNNFVNLKNITYLVLDEADRMLDMGFEPQIMKILLDVRPDR---QTVMTSATWPR 421
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSEP 433
+ L S + + V + + SV N+ + EE+ IQ + S
Sbjct: 422 SVHRLAQSYLKEPMLVYVGTLDLVAVSSVKQNIIITTEEEKWIHIQTFLQSL-----STT 476
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
KV+ V + + +L S L SI + + + K V ++ +
Sbjct: 477 DKVIVFVSRKAVADHLSSELILGNMSIESLHGDREQRDREKA-LENFKTGKVRILIATDL 535
Query: 494 STAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
++ L+ +++ V DF +++ YV + R +G+ + T++D A +++ IL
Sbjct: 536 ASRGLDVHDITHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTMTRNDWRFAPELVNIL 595
Query: 552 EQCGQVVPDAL 562
++ Q++PD L
Sbjct: 596 QRANQIIPDDL 606
>gi|313202537|ref|YP_004041194.1| dead/deah box helicase domain-containing protein [Paludibacter
propionicigenes WB4]
gi|312441853|gb|ADQ78209.1| DEAD/DEAH box helicase domain protein [Paludibacter propionicigenes
WB4]
Length = 408
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 292 GAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI 351
+A D Q GL++ + +++TP RLL ++L ID S V ++D D + I
Sbjct: 112 ASAWDTQRRGLQNGA-DVVIATPGRLLSHINLYDIDFSHVKYFILDEADRMLDMGFFDDI 170
Query: 352 RQSISGKP---HTVVFNDCLTYTSVPAVQNLLLGSI--NRLSLNQSVASQSACIIQSVNV 406
Q ++ P T++F+ ++P LL +I N + + +V+ I+Q+ +
Sbjct: 171 MQVVNRLPKDRQTIMFS-----ATMPPKIRLLAKTILNNPVEVKIAVSRPPESIMQTAYI 225
Query: 407 CASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNC 466
C ++ ++ H + + E KV+ G K + L T + G S+ +
Sbjct: 226 CYEAQKH-----GIIRHLFAEQ---EATKVIIFSGSKLKVKELFKTFRQMGLSVGEMHSD 277
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMAR 525
+ ++ V + + ++ D +S ++++ +VI D ++YV + AR
Sbjct: 278 LDQAQRDHVMHEFKNNRVSILVATDIVSRGIDIDDISLVINYDVPHDAEDYVHRIGRTAR 337
Query: 526 HTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVP 559
+ G+ +F ++++ Q+ + LE+ +P
Sbjct: 338 ASAKGMSITFVSEEEQYKFKQIEDFLEKDIYKIP 371
>gi|384197101|ref|YP_005582845.1| putative cold-shock DEAD-box protein A [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333110931|gb|AEF27947.1| putative cold-shock DEAD-box protein A [Bifidobacterium breve
ACS-071-V-Sch8b]
Length = 675
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V PL AFG++T +++ G HQ+ L++ + +V+ P
Sbjct: 126 PRGLVLAPTRELANQINDVLMPLAHAFGMNTTTIYGGVKYIHQVRDLKAGA-DIVVACPG 184
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYTS 372
RL L+ KA+ +S V ++V+D D ++ L ++ + IS ++F+ L +
Sbjct: 185 RLEDLLRQKALTLSSVEVVVIDEADEMADMGFLPPVKRLLEQISPNAQHMLFSATLDH-G 243
Query: 373 VPAVQNLLL 381
V V N L
Sbjct: 244 VDEVVNTFL 252
>gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
Length = 690
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 242 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 300
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 301 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 360
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 361 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 417
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 418 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 474
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 475 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 534
Query: 551 LEQCGQVV 558
L + Q +
Sbjct: 535 LREANQAI 542
>gi|261365074|ref|ZP_05977957.1| putative ATP-dependent RNA helicase RhlE [Neisseria mucosa ATCC
25996]
gi|288566497|gb|EFC88057.1| putative ATP-dependent RNA helicase RhlE [Neisseria mucosa ATCC
25996]
Length = 457
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 177 KFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQI 233
KF L L+ I +A+R +G E P + + I F +DI+ + +GS T
Sbjct: 4 KFADLNLDKNILSAVRSEGYESPTP--IQAQAIPF---ALEGRDIMASAQTGSGKTA--- 55
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR----SVCKPLKAFGIHTVSL 289
A+++ T R EK G GP L L ++E AA+V + K ++ F TVS+
Sbjct: 56 AFLLPTLQRLTKRSEKPG---KGPRALVLTPTRELAAQVEKNALAYAKNMRWF--RTVSI 110
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
GA+ +Q L S + +V+TP RL+ L+ +D + +L++D D +
Sbjct: 111 VGGASFGYQTRAL-SKPVDLIVATPGRLMDLMQSGKVDFDRLEVLILDEADRM 162
>gi|420161871|ref|ZP_14668633.1| ATP-dependent RNA helicase [Weissella koreensis KCTC 3621]
gi|394744878|gb|EJF33797.1| ATP-dependent RNA helicase [Weissella koreensis KCTC 3621]
Length = 461
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL + SQE A + V + FG+ T++L GA + HQ+ L+ PE LV TP
Sbjct: 61 GEQLLVMAPSQELAMQTTRVMREWANIFGLKTLALTGGANVKHQLDRLKK-HPEILVGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDT 347
R+ +LV+ K + + + L++D D L + +T
Sbjct: 120 GRVAELVNNKKLKLQRLRTLILDEADILLQEET 152
>gi|291456631|ref|ZP_06596021.1| putative ATP-dependent RNA helicase [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|291381908|gb|EFE89426.1| putative ATP-dependent RNA helicase [Bifidobacterium breve DSM
20213 = JCM 1192]
Length = 675
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V PL AFG++T +++ G HQ+ L++ + +V+ P
Sbjct: 126 PRGLVLAPTRELANQINDVLMPLAHAFGMNTTTIYGGVKYIHQVRDLKAGA-DIVVACPG 184
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYTS 372
RL L+ KA+ +S V ++V+D D ++ L ++ + IS ++F+ L +
Sbjct: 185 RLEDLLRQKALTLSSVEVVVIDEADEMADMGFLPPVKRLLEQISPNAQHMLFSATLDH-G 243
Query: 373 VPAVQNLLL 381
V V N L
Sbjct: 244 VDEVVNTFL 252
>gi|405120560|gb|AFR95330.1| ATP-dependent RNA helicase DBP3 [Cryptococcus neoformans var.
grubii H99]
Length = 611
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 16/296 (5%)
Query: 279 LKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLL 334
L AFG + +V + G D Q L + +V TP R L L +D+S VS L
Sbjct: 280 LSAFGEQVGLKSVCIFGGVGKDGQARELSQKDARVVVGTPGRTLDLADSGELDLSSVSYL 339
Query: 335 VVDRLDSLSKGDTLSLIRQSISGKP------HTVVFNDCLTYTSVPAVQNLLLGSINRLS 388
V+D D + + IR+ I+ P TV+F+ SV + + L + R++
Sbjct: 340 VLDEADRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSATWP-ESVRRLASTFLNAPLRIT 398
Query: 389 LNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE--PLKVLYIVGKDSKF 446
+ S + I Q V V + +K + L H +S+ P ++L +
Sbjct: 399 VGSDELSANKRIEQVVEVLDNPRDKDFRLTHHLKAHLKAHPNSKASPTRILVFALYKKEA 458
Query: 447 QNLVSTLKCKGYSISTGSNCIVSHIK-NSVEADGRKRPAVSMIDKDHISTAELEEYEVVI 505
Q L T++ GY++ + + ++EA + V + ++ + +VI
Sbjct: 459 QRLEYTIRRAGYAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAARGLDIPDVGLVI 518
Query: 506 VPDFIISMKNYVEILTSMARHTVSGILHSFFTKD--DAAHAGQMIEILEQCGQVVP 559
F ++ +++V R +G +FFT + + + AG+ + +L G +P
Sbjct: 519 NVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLAGEFMRVLRDVGAEIP 574
>gi|328955216|ref|YP_004372549.1| DEAD/DEAH box helicase domain protein [Coriobacterium glomerans
PW2]
gi|328455540|gb|AEB06734.1| DEAD/DEAH box helicase domain protein [Coriobacterium glomerans
PW2]
Length = 618
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 245 ARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIH-TVSLHPGAAIDHQITGLR 303
+R+ EG GP +L + ++E A ++ SVC + H V++ G + Q + LR
Sbjct: 128 SRRSAEG---RGPKMLIITPTRELAQQIDSVCTQIATRTKHIAVTVVGGVGYNPQKSALR 184
Query: 304 -SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP--- 359
C+ LV+TP RL+ L+ ++S V +LV+D D + L ++Q ++ P
Sbjct: 185 RGCD--ILVATPGRLIDLIDQGVCNLSEVEILVIDEADRMLDMGFLPSVKQIVALTPPER 242
Query: 360 HTVVFNDCLTYTSVPAVQNLL 380
T++F+ L ++ ++++L+
Sbjct: 243 QTLLFSATLDEKTLGSIRDLV 263
>gi|298368676|ref|ZP_06979994.1| ATP-dependent RNA helicase RhlE [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282679|gb|EFI24166.1| ATP-dependent RNA helicase RhlE [Neisseria sp. oral taxon 014 str.
F0314]
Length = 443
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 24/199 (12%)
Query: 177 KFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILET--SGSSSTIVQI 233
KF L L+ I +A+R +G E P + + I F +DI+ + +GS T
Sbjct: 4 KFADLNLDKNILSAVRSEGYESPTP--IQAQAIPF---ALEGRDIMASAQTGSGKTA--- 55
Query: 234 AWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR----SVCKPLKAFGIHTVSL 289
A+++ T R EK G GP L L ++E AA+V + K ++ F TVS+
Sbjct: 56 AFLLPTLQRLTKRSEKPG---KGPRALVLTPTRELAAQVEKNALAYAKNMRWF--RTVSI 110
Query: 290 HPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG--D 346
GA+ +Q L S + +V+TP RL+ L+ +D + +L++D D L G D
Sbjct: 111 VGGASFGYQTRAL-SKPVDLIVATPGRLMDLMQSGKVDFDRLEVLILDEADRMLDMGFID 169
Query: 347 TLSLIRQSISGKPHTVVFN 365
+ I ++ T++F+
Sbjct: 170 DIETIVEATPSDRQTLLFS 188
>gi|425772845|gb|EKV11231.1| hypothetical protein PDIP_56740 [Penicillium digitatum Pd1]
gi|425773582|gb|EKV11927.1| hypothetical protein PDIG_47360 [Penicillium digitatum PHI26]
Length = 1107
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 133/286 (46%), Gaps = 22/286 (7%)
Query: 289 LHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKG-- 345
++ G D Q L+ +V+TP RL L++ +ID++ V+ LV+D D L KG
Sbjct: 797 IYGGVGKDEQRRALQKAA--IVVATPGRLKDLLNDGSIDLAKVTYLVLDEADRMLDKGFE 854
Query: 346 -DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINR-----LSLNQSVASQSAC 399
D +++ + TV+F T T +V++L + + + S ++
Sbjct: 855 QDIKDIVKPMPVSRRQTVMF----TATWPRSVRDLAASFMKTPVTVTIGGDPSADPRANT 910
Query: 400 IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS-KFQNLVSTLKCKGY 458
I+ V EK + +Q+L + + E + V + K++ + +NL+ + KG+
Sbjct: 911 RIKQVVEVIDGREKEGRLVQLLTKSQRGNQSPEKVLVFCLYKKEAMRIENLI---RNKGF 967
Query: 459 SISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELE--EYEVVIVPDFIISMKNY 516
+++ G + ++ D K+ +++ ++ L+ ++VI F +++++Y
Sbjct: 968 AVA-GIHGDLNQSDRFRNLDAFKKGNATVLVATDVAARGLDIPNVKLVINVTFPLTVEDY 1026
Query: 517 VEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
V + R G+ + FT+ D +G +I +L+ Q VP+AL
Sbjct: 1027 VHRIGRTGRAGADGLAITMFTETDKGLSGGLINVLKAAKQDVPEAL 1072
>gi|407410868|gb|EKF33151.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi marinkellei]
Length = 546
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 114/265 (43%), Gaps = 15/265 (5%)
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL--SKGDTLSLIRQSISG----KPHT 361
+ ++TP R+ ++ K ID+ LV D +D L S D L ++ ++ +
Sbjct: 240 DIFITTPRRVFTMIEKKLIDLGNTQYLVFDEVDRLWDSATDNLQVVDSILTACTFEEKVV 299
Query: 362 VVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVL 421
+F L+ + ++ R+ ++ V++ I Q + C ++ KI++ +L
Sbjct: 300 ALFTATLSSKIEGVARTVMSPDPIRIIVSGRVSANKK-ISQELVFCGNELGKIVEIRNLL 358
Query: 422 DHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRK 481
VL V + + L ++C+G +I+ ++ + ++ + R
Sbjct: 359 REGINP-------PVLIFVQSIERTKELYDEIRCQGLNIAVMNSKMTHEERDETIMNFRL 411
Query: 482 RPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
+I D +S + + VI DF I++++Y+ + R +G +FFT+DD
Sbjct: 412 GKLWVIITTDLLSRGIDFKNIGTVINFDFPITIESYIHRIGRCGRAGKTGKAITFFTEDD 471
Query: 541 AAHAGQMIEILEQCGQVVPDALRDL 565
+ ++++ G V D + ++
Sbjct: 472 KERIPPIARVMKESGSAVEDWMLEI 496
>gi|452824121|gb|EME31126.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 573
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P + + ++E ++ VC+ L + GI ++SL GA I QI L+ +P ++ TP
Sbjct: 137 PQVFIIEPTRELCVQIAKVCESLASNMGIRSISLIGGANIQRQIDSLKERQPHIVLGTPG 196
Query: 316 RLLKLVSLKAI-DVSGVSLLVVDR----LDSLSKGDTLSLIRQSISGKPHTV 362
RL +L+ + I + + VS++V+D LD S G+ L + Q + + T+
Sbjct: 197 RLYELLIERHILNATQVSIVVIDEVDHCLDMPSNGEKLEALLQRCASRKQTI 248
>gi|28207202|gb|AAK72102.1| DEAD-box protein CAGE [Homo sapiens]
Length = 630
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 139/321 (43%), Gaps = 34/321 (10%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A V + C G+ ++ ++ G + QI + S + +++TP
Sbjct: 296 GPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDI-SKGVDIIIATPG 354
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSI------------SGKPHTVV 363
RL L ++++ ++ LV+D D + + IR+ + S V
Sbjct: 355 RLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTV 414
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
L+Y P + + +G++N +++N + Q++ V E++ L V +
Sbjct: 415 RQLALSYLKDPMI--VYVGNLNLVAVN--------TVKQNIIVTTEKEKRALTQEFVENM 464
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEADGRKR 482
+ D KV+ V + +L S +G S S N S + +VE D +
Sbjct: 465 SPND-------KVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVE-DFKSG 516
Query: 483 PAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+I D +S +L + V DF ++ YV + S+ I S T+ D+
Sbjct: 517 NIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGSLDGQERLHI-SSLITQRDS 575
Query: 542 AHAGQMIEILEQCGQVVPDAL 562
AG++I+IL++ Q VP+ L
Sbjct: 576 KMAGELIKILDRANQSVPEDL 596
>gi|418520233|ref|ZP_13086283.1| ATP-dependent RNA helicase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410704187|gb|EKQ62672.1| ATP-dependent RNA helicase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 430
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 38/299 (12%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF---GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
L LV ++E AA+V + L A + +V G++I+ Q+ LR + +V+TP R
Sbjct: 81 LVLVPTRELAAQVEDALRQLAAHLPRRLKSVVATGGSSINPQLLALRGGA-DLVVATPGR 139
Query: 317 LLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV 373
LL LV A+ ++GV+ LV+ DRL L G L I + + TV+F + T
Sbjct: 140 LLDLVEHNALRLNGVTTLVLDEADRLLELGFGAELDRILALLPAQRQTVLF----SATFP 195
Query: 374 PAVQNLL---LGSINRLSLNQSVASQSACIIQ-SVNVCASDEEKILKGIQVLDHAYGDHF 429
PA+ +L L R++++ + Q+ I Q ++ V A ++L+ + H
Sbjct: 196 PAIASLAKRRLRDPLRITID-ATPEQAPAIAQCAIAVDAGQRTQLLRHLL--------HE 246
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
H+ P ++++ + S K TG + H + S R A D
Sbjct: 247 HAWPQLLVFVASRHSAD-------KVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQAD 299
Query: 490 KDHISTAEL-------EEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ +L + V+ D S +Y + AR SG+ SF T D A
Sbjct: 300 VQVLVATDLAGRGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSA 358
>gi|349806009|gb|AEQ18477.1| putative rna-dependent helicase p72 [Hymenochirus curtipes]
Length = 337
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 13/267 (4%)
Query: 295 IDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQS 354
I+HQ G+ C ++TP RL+ + ++ + LV+D D + IR+
Sbjct: 81 INHQERGVEIC-----IATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKI 135
Query: 355 ISG-KPHTVVFNDCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEE 412
+ +P T+ V + L ++++ S + I+Q V+VC + E
Sbjct: 136 VDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQINVGNLELSANHNILQIVDVC-QESE 194
Query: 413 KILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIK 472
K K IQ+++ + + K + V + +L ++ G+ +
Sbjct: 195 KDHKLIQLMEEIMAEKEN----KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQQER 250
Query: 473 NSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGI 531
+ V + R A +I D S ++E+ + VI D+ S ++YV + AR T G
Sbjct: 251 DWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGT 310
Query: 532 LHSFFTKDDAAHAGQMIEILEQCGQVV 558
++FFT + A +++++LE+ Q +
Sbjct: 311 AYTFFTPGNLKQARELVKVLEEANQTI 337
>gi|427794033|gb|JAA62468.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1111
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP + + ++E A ++ CK K+ G+ V ++ G I QI L+ E +V TP
Sbjct: 488 GPIAVIMTPTRELAMQITKDCKKFTKSLGLRVVCVYGGTGISEQIADLKRGA-EIIVCTP 546
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCL 368
R++ +++ + + + +V+D D + G ++R SI TV+F+
Sbjct: 547 GRMIDMLAANNGRVTNFRRTTYVVLDEADRMFDMGFEPQVMRIIDSIRPDRQTVMFSATF 606
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
+ +L+ I L +SV + ++ V + EEK K +++L
Sbjct: 607 PRQMEALARRILIKPIEILVGGRSVVCKD---VEQHVVILTQEEKFFKLLELL------G 657
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
+ + + V K L+ L ++ I ++S D K V ++
Sbjct: 658 LYQDKGSAIVFVDKQEHADILLKDLMKASHNAMALHGGIDQFDRDSTIVD-FKAGKVGVL 716
Query: 489 DKDHISTAELEEYEVVIVPDFIIS--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
++ L+ +++V +F ++YV R G ++F T+D +
Sbjct: 717 IATSVAARGLDVKHLILVVNFDCPNHYEDYVHRCGRTGRAGNKGYAYTFITEDQGRYTAD 776
Query: 547 MIEILEQCGQVVPDALRDL 565
+I+ LE G +P+ L+ L
Sbjct: 777 VIKALELSGNPIPEDLQKL 795
>gi|365990195|ref|XP_003671927.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
gi|343770701|emb|CCD26684.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
Length = 523
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 55/349 (15%)
Query: 252 FSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQI----------TG 301
F+F P + +LV + + K S GI + + P + QI G
Sbjct: 158 FAFGVPAIDYLVKTNQSNNKKNS-------GGIQVLVISPTRELASQIYDNLIILTEKVG 210
Query: 302 LRSC----------------EPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSK 344
L+ C + + +V+TP RLL L+ ++++S V LV+D D L K
Sbjct: 211 LQCCCVYGGVPKEAQRIQLKKSQVVVATPGRLLDLIQEGSVNLSAVKYLVLDEADRMLEK 270
Query: 345 G---DTLSLIRQSISGKPHTVVFNDCLTYTSVPAVQNLLLGSIN---RLSL-NQSVASQS 397
G D ++IR++ T++F T T V+ L +N ++S+ N+ + +
Sbjct: 271 GFEEDIKNIIRETSPKGRQTLMF----TATWPKEVRELASSFMNEPVKVSIGNRDELTAN 326
Query: 398 ACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLK---VLYIVGKDSKFQNLVSTLK 454
I Q V V D ++ K ++LD +HS P K VL + + LK
Sbjct: 327 KRITQIVEVI--DPQR--KDRKLLDLL--KKYHSGPTKNDKVLIFALYKKEAARVERNLK 380
Query: 455 CKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISM 513
GY ++ + + + + ++ D + ++ + VI F +++
Sbjct: 381 YNGYEVAAIHGDLSQEQRTRALGEFKAGKTNLLLATDVAARGLDIPNVKTVINLTFPLTV 440
Query: 514 KNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
++YV + R +G H+ FT+ + AG ++ +L Q VP+ L
Sbjct: 441 EDYVHRIGRTGRAGQTGTAHTLFTEHEKHLAGGLVNVLNGANQPVPEDL 489
>gi|341892501|gb|EGT48436.1| hypothetical protein CAEBREN_12320 [Caenorhabditis brenneri]
Length = 503
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 169/394 (42%), Gaps = 35/394 (8%)
Query: 185 AIENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATA-- 240
AI N ++ +G ++ +P+ W I S +D + S GS T+ A+++
Sbjct: 95 AIMNEIKKNGFDKPSPIQAQMWPILL-----SGQDCIGVSQTGSGKTL---AFLLPAFLH 146
Query: 241 ADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQIT 300
D+ ++ + P +L L ++E A ++ + G +V L+ G + Q+
Sbjct: 147 IDAQYKQYEANEKKPSPSVLVLSPTRELAQQIEGEVQKYSYNGYKSVCLYGGGSRKDQVD 206
Query: 301 GLRSCEP--EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISG 357
SC+ E +++TP RL L + I ++ V+ +V+D D L G ++ R
Sbjct: 207 ---SCKGGIEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEAAIRRILFEI 263
Query: 358 KPHTVVFNDCLTYTSVPAVQNLLLGSINR---LSLNQSVASQSACIIQSVNVCASDE--- 411
+P +V LT + P L + +++N S+ S + E
Sbjct: 264 RPDRLV---ALTSATWPEGVRKLTDRYTKQAIMAVNGSLDLTSCKTVTQFFEFVPHENRF 320
Query: 412 EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI 471
+++ + + L+ A+G ++ K++ V +L S KG + S G + S
Sbjct: 321 DRVCEIVNFLNTAHGKNY-----KMIIFVKSKVMADHLSSDFCMKGIN-SQGLHGGRSQT 374
Query: 472 KNSVEADGRKRPAVSMIDKDHISTAELEEYEV--VIVPDFIISMKNYVEILTSMARHTVS 529
+ + V ++ +++ ++ ++ V+ DF + ++ YV + R +
Sbjct: 375 DRELSLKMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRN 434
Query: 530 GILHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
G SF +D ++ +I ILE+ GQ VP+ LR
Sbjct: 435 GEAMSFMWWNDRSNFEGLISILEKSGQEVPEQLR 468
>gi|339634234|ref|YP_004725875.1| ATP-dependent RNA helicase [Weissella koreensis KACC 15510]
gi|338854030|gb|AEJ23196.1| ATP-dependent RNA helicase [Weissella koreensis KACC 15510]
Length = 461
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL + SQE A + V + FG+ T++L GA + HQ+ L+ PE LV TP
Sbjct: 61 GEQLLVMAPSQELAMQTTRVMREWANIFGLKTLALTGGANVKHQLDRLKK-HPEILVGTP 119
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDT 347
R+ +LV+ K + + + L++D D L + +T
Sbjct: 120 GRVAELVNNKKLKLQRLRTLILDEADILLQEET 152
>gi|67969935|dbj|BAE01315.1| unnamed protein product [Macaca fascicularis]
Length = 509
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 12/315 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 62 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 120
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFNDCLTYT 371
RL+ + ++ + LV+D D + IR+ I T++++
Sbjct: 121 GRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 180
Query: 372 SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHS 431
++ L I+ +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 181 VRQLAEDFLKDYIH-INIGALELSANHNILQIVDVC-HDVEKDEKLIRLMEEIMSEKEN- 237
Query: 432 EPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
K + V + L ++ G+ ++ V + + A +I D
Sbjct: 238 ---KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 294
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +
Sbjct: 295 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 354
Query: 551 LEQCGQVVPDALRDL 565
L + Q + L L
Sbjct: 355 LREANQAINPKLLQL 369
>gi|443692100|gb|ELT93774.1| hypothetical protein CAPTEDRAFT_221337 [Capitella teleta]
Length = 760
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 131/310 (42%), Gaps = 16/310 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L LV ++E A +V V FG ++ ++ GA QI L E +
Sbjct: 231 GPICLVLVPTRELAQQVAQVAS---EFGQSSYVNNCCVYGGAPKGPQIRSLEKGV-EICI 286
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ + + ++ + LV+D D + IR+ I +P + T+
Sbjct: 287 ATPGRLIDFLETRKTNLRRTTYLVLDEADRMLDMGFEPQIRKIIEQVRPDRQILMWSATW 346
Query: 371 T-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
V + L ++++ + I+Q V+VC +D+EK K ++L+ +
Sbjct: 347 PKEVRQLAEEFLTEYTQVNVGALSLHANHNILQIVDVC-TDDEKPYKLNKLLEEIMREKE 405
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
+ K L + L + G+ + ++ V A+ R + +
Sbjct: 406 N----KTLIFTETKRRCDELQRRMTRDGWQAVSIHGDKSQPERDWVLAEFRSGRSPICVA 461
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D S ++++ + VI D+ ++YV + AR + +G ++FFT+ + A +I
Sbjct: 462 TDVASRGLDVDDVKFVINFDYPNCSEDYVHRIGRTARASNTGTAYTFFTQGNVKQAKDLI 521
Query: 549 EILEQCGQVV 558
E+L + Q +
Sbjct: 522 EVLREAKQQI 531
>gi|303316314|ref|XP_003068159.1| ATP-dependent RNA helicase DBP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240107840|gb|EER26014.1| ATP-dependent RNA helicase DBP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 512
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 137/326 (42%), Gaps = 38/326 (11%)
Query: 257 PFLLFLVSSQEKAAKVR-SVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L + ++E A ++ + + A + ++ G+ DHQ +R+ +++TP
Sbjct: 170 PCALIITPTRELAVQIYDQLLRFSSAVDVGIACIYGGSPKDHQRREIRNAS--VVIATPG 227
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
RL + + I++SGV LV+D D + I+ + G P T + + P
Sbjct: 228 RLKDFQADQTINLSGVKYLVLDEADRMLDKGFEQDIQDIVKGIPSTQKRQTIMFTATWPI 287
Query: 376 VQNLLLGSINRLSLNQSVASQSAC-----IIQSVNVCASDEE-----KILKGIQVLDHAY 425
L S + + ++ S I Q V V E+ ++L+ Q D A
Sbjct: 288 GVRNLAASFTKNPVTVTIGDSSDIRANKRIKQIVEVLQPYEKDSRLLELLRRYQ--DGAK 345
Query: 426 GDH-------FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEAD 478
+H + E ++V +G KG+ ++ G + +S + +
Sbjct: 346 NNHRILVFCLYKKEAMRVERFIG-------------SKGFKVA-GIHGDMSQTERFRSLE 391
Query: 479 GRKRPAVSMIDKDHISTAELEEYEVVIVPD--FIISMKNYVEILTSMARHTVSGILHSFF 536
K ++S++ ++ L+ V +V + F +++++YV + R G+ + F
Sbjct: 392 AFKSGSISLLVATDVAARGLDIPAVKLVLNVTFPLTIEDYVHRIGRTGRAGAEGLAITLF 451
Query: 537 TKDDAAHAGQMIEILEQCGQVVPDAL 562
T+ D A +G +I +L Q VP++L
Sbjct: 452 TERDKALSGPLINVLRAADQDVPESL 477
>gi|418516224|ref|ZP_13082399.1| ATP-dependent RNA helicase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|410707025|gb|EKQ65480.1| ATP-dependent RNA helicase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 430
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 38/299 (12%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF---GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
L LV ++E AA+V + L A + +V G++I+ Q+ LR + +V+TP R
Sbjct: 81 LVLVPTRELAAQVEDALRQLAAHLPRRLTSVVATGGSSINPQLLALRGGA-DLVVATPGR 139
Query: 317 LLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV 373
LL LV A+ ++GV+ LV+ DRL L G L I + + TV+F+ T
Sbjct: 140 LLDLVEHNALRLNGVTTLVLDEADRLLELGFGAELDRILALLPAQRQTVLFS----ATFP 195
Query: 374 PAVQNLL---LGSINRLSLNQSVASQSACIIQ-SVNVCASDEEKILKGIQVLDHAYGDHF 429
PA+ +L L R++++ + Q+ I Q ++ V A ++L+ + H
Sbjct: 196 PAIASLAKRRLRDPLRITID-ATPEQAPAIAQCAIAVDAGQRTQLLRHLL--------HE 246
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
H+ P ++++ + S K TG + H + S R A D
Sbjct: 247 HAWPQLLVFVASRHSAD-------KVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQAD 299
Query: 490 KDHISTAEL-------EEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ +L + V+ D S +Y + AR SG+ SF T D A
Sbjct: 300 VQVLVATDLAGRGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSA 358
>gi|406607618|emb|CCH41089.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 568
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 16/313 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP +L L ++E A ++++ C FG I ++ G QI L E +
Sbjct: 217 GPIVLILAPTRELAVQIQTECS---KFGHTSRIRNTCVYGGVPKGQQIRDLARGS-EICI 272
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ ++ ++ V+ LV+D D + IR+ I +P T+
Sbjct: 273 ATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATW 332
Query: 371 T-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
V + L ++++ + S I Q V V SD EK + ++ L+ A D+
Sbjct: 333 PKEVQTLARDYLHDYIQVNVGSLELAASHTIKQLVEVV-SDFEKRDRLLKHLEFAMSDNN 391
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
KVL + L+ G+ ++ V + R + M+
Sbjct: 392 S----KVLIFASTKRTCDEITKYLRDDGWPALAIHGDKQQQERDWVLGEFRAGRSPIMVA 447
Query: 490 KDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D ++ +++ VI D ++++YV + R SG SFFT+ ++ +I+
Sbjct: 448 TD-VAARDVKGINFVINFDMPGNIEDYVHRIGRTGRAGTSGTSVSFFTEGNSKLGTSLIK 506
Query: 550 ILEQCGQVVPDAL 562
IL + Q VP AL
Sbjct: 507 ILREANQEVPPAL 519
>gi|374314715|ref|YP_005061143.1| DNA/RNA helicase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350359|gb|AEV28133.1| DNA/RNA helicase, superfamily II [Sphaerochaeta pleomorpha str.
Grapes]
Length = 380
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 189 AMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIAR 246
A+ HD + P+ E S DIL +GS T+ + I+ +
Sbjct: 15 ALEHDNITTPYPI-----QTEVIPAILSNNDILGIAKTGSGKTLSYVLPIL------MHL 63
Query: 247 KEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL---KAFGIHTVSLHPGAAIDHQITGLR 303
++KE +L +V ++E AA+V SV A + T+++ G +I+ Q+ +R
Sbjct: 64 QKKEVLKNRQIQVLVMVPTRELAAQVNSVFSQYIHQTALDLKTLAVFGGTSINSQMMVMR 123
Query: 304 SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
+ LV+TP RLL+L+SL A+ +S + ++V+D D +
Sbjct: 124 NLS--ILVATPGRLLELISLHAVHLSSLEIVVIDEADKM 160
>gi|392539060|ref|ZP_10286197.1| DEAD/DEAH box helicase [Pseudoalteromonas marina mano4]
Length = 440
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAADS 243
+E + H G+ Q P + + + + DI S GS T+ A+++
Sbjct: 12 LETQLAHQGITQ--PTDIQAHAVP---TALAGHDIFAQSKTGSGKTL---AFLLPAVQRV 63
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGL 302
+ +K S P +L + ++E A +V + + L A I V + G + QI L
Sbjct: 64 MKQK---ALSKRDPRVLIVAPTRELATQVFTQLRLLIAGTAIKAVKVLGGENFNDQIKAL 120
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGK- 358
R+ +P+F+V+TP RL V+ +++ +SG+ LL+ D D L + L LI + +
Sbjct: 121 RN-DPQFVVATPGRLADHVTKRSLQLSGLELLIFDEADRILDLGFTEQLKLINDEANHRL 179
Query: 359 PHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC 407
T++F+ L + V A+ LL +++L+ + Q + I Q++ +
Sbjct: 180 RQTLLFSATLDHAQVDALSRNLLKKPKQITLS-AANEQHSDITQTLYLA 227
>gi|170039965|ref|XP_001847786.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863566|gb|EDS26949.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 942
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 187/479 (39%), Gaps = 52/479 (10%)
Query: 118 EQTKEKAINLKNSQDKSLLFID--GVE----KRTGNVERAEVHLNGKSCANGH----HGQ 167
E K+ A NL N Q K L ID G+ ++ VE E+ ++ + + G
Sbjct: 210 EDIKDTAANLANKQKKELAKIDHSGINYLPFRKVFYVEVPEIAKMTQTEVDAYKAELEGI 269
Query: 168 ACEKLDCPSKFLILCLNAIE----NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL-- 221
+ CP + +R G E+ P+ + S +D++
Sbjct: 270 NVKGKGCPKPIRTWAHCGVTRKEFEVLRKLGFEKPTPIQCQAI-----PAVMSGRDLIGI 324
Query: 222 ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKV-RSVCKPLK 280
+GS T+ I + D +E EG P + + ++E ++ + + K K
Sbjct: 325 AKTGSGKTLAFILPMFRHVLDQPPLEEAEG-----PIAIIMSPTRELCMQIGKDIKKFAK 379
Query: 281 AFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVSGVSLLVVD 337
+ + V ++ G I QI L+ E +V TP R++ ++ S + ++ V+ +V+D
Sbjct: 380 SLNLRAVCVYGGTGISEQIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLD 438
Query: 338 RLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVA 394
D + G ++R +I TV+F+ + P L I + + V
Sbjct: 439 EADRMFDMGFEPQVMRIIDNIRPDRQTVMFS-----ATFPRQMEALARRILKKPVEIQVG 493
Query: 395 SQSAC---IIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVS 451
+S + Q V V D K K +++L + E ++ V K L+
Sbjct: 494 GRSVVCKEVEQHVVVLEEDA-KFFKLLELLG------LYQELGSIIVFVDKQENADILLK 546
Query: 452 TLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFII 511
L Y + I ++S D K+ V ++ ++ L+ ++++V ++
Sbjct: 547 DLMKASYPCMSLHGGIDQFDRDSTIID-FKQGRVKLLIATSVAARGLDVKQLILVVNYDC 605
Query: 512 S--MKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCHT 568
++YV R G +F T + ++G +I LE G +PD LR L T
Sbjct: 606 PNHYEDYVHRCGRTGRAGNKGFAWTFLTHEQGRYSGDIIRALELSGGTIPDDLRQLWET 664
>gi|157126319|ref|XP_001654592.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882564|gb|EAT46789.1| AAEL002083-PA [Aedes aegypti]
Length = 699
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 150/362 (41%), Gaps = 27/362 (7%)
Query: 216 SAKDI--LETSGSSSTIVQIAWIVA--TAADSIARKEKEGFSFTGPFLLFLVSSQEKAAK 271
S +D+ + +GS T+ IA + T D + R + GP L L ++E A +
Sbjct: 158 SGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGD-------GPIALVLAPTRELAQQ 210
Query: 272 VRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSG 330
++ V + + + GA QI L E +++TP RL+ + ++
Sbjct: 211 IQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGA-EIVIATPGRLIDFLERGITNLRR 269
Query: 331 VSLLVVDRLDSLSKGDTLSLIRQSISG--KPHTVVFNDCLTYTSVPAVQNL---LLGSIN 385
+ LV+D D + IR+ I G +P V T+ V+NL L
Sbjct: 270 CTYLVLDEADRMLDMGFEPQIRK-IMGQIRPDRQVLMWSATWPK--EVRNLAEEFLNDYI 326
Query: 386 RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSK 445
++++ S + I+Q V+VC D EK K +++L ++ K + V +
Sbjct: 327 QINIGSLNLSANHNILQIVDVC-EDYEKDQKLMKLLTEISAEN----ETKTIIFVETKRR 381
Query: 446 FQNLVSTLKCKGY-SISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVV 504
++ + G+ ++S + + A R + + ++E+ + V
Sbjct: 382 VDDITRNINRNGWRAVSIHGDKSQQERDYVLNAFRNGRQGILVATDVAARGLDVEDVKFV 441
Query: 505 IVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRD 564
I D+ + ++YV + R +G ++ FT +A AG +I +L + QV+ L +
Sbjct: 442 INYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKAGDLINVLREANQVINPKLAE 501
Query: 565 LC 566
+
Sbjct: 502 MA 503
>gi|15615910|ref|NP_244214.1| RNA helicase [Bacillus halodurans C-125]
gi|10175971|dbj|BAB07067.1| RNA helicase [Bacillus halodurans C-125]
Length = 389
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
L L +QE A ++ V K L A I + L GA I Q+ L+ +P V TP R+L
Sbjct: 74 LILAPTQELAMQIVEVAKQLTATTSITVLPLIGGANIKRQVEKLKKKKPHVAVGTPGRIL 133
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSL 342
+L+ +K + V V ++VVD D +
Sbjct: 134 ELMEMKKLKVPHVKMIVVDEADRM 157
>gi|355563283|gb|EHH19845.1| Putative ATP-dependent RNA helicase DDX53 [Macaca mulatta]
Length = 596
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 31/320 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C + ++ + G QI + S + + +++TP
Sbjct: 260 GPGMLVLTPTRELALQVEAECSKYSYKDLKSICICGGRNRIGQIEDI-SKDVDIIIATPG 318
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI----------RQS--ISGKPHTVV 363
RL L ++++ ++ LV+D D + + I RQ+ IS V
Sbjct: 319 RLNDLQMNNSVNLRSITYLVMDEADKMLDMEFEPQIMKILLDVHPDRQTVMISATWPDTV 378
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
+Y P + + +G++N ++N + Q++ V +E++ L + +
Sbjct: 379 RRLARSYLKDPMI--VYVGNLNLAAVN--------TVKQNIIVTTEEEKRALTQEFIENM 428
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
+ D KV+ V + +L S +G S+ + K D
Sbjct: 429 SPND-------KVIMFVSQKRIADDLSSDFNIQGISVESLHGNSEESDKERALQDFESGN 481
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
+I D ++ ++ + V DF +++ YV + + R +G + T+ DA
Sbjct: 482 IKILITTDLVARGLDVNDVTHVYNYDFPWNIEEYVHRVGRIGRAGKTGTSVTLITQRDAK 541
Query: 543 HAGQMIEILEQCGQVVPDAL 562
AG++I+ILE+ Q VP+ L
Sbjct: 542 MAGELIKILERANQSVPEDL 561
>gi|357050814|ref|ZP_09112010.1| hypothetical protein HMPREF9478_01993 [Enterococcus saccharolyticus
30_1]
gi|355380439|gb|EHG27575.1| hypothetical protein HMPREF9478_01993 [Enterococcus saccharolyticus
30_1]
Length = 418
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
G LL L SSQE A +V V + + + + L GA QI L++ +PE LV TP
Sbjct: 66 GNQLLILTSSQELAMQVTQVARDWAQLLDLQVLPLIGGANTKRQIEKLKA-KPEVLVGTP 124
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVP 374
R+L+L+ LK + + +V+D +D L K L + ++ P T +
Sbjct: 125 GRVLELIKLKKVKTQQIHGVVLDEVDQLLKEGAFGLASKILTLIPKQA------TRSFFS 178
Query: 375 AVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPL 434
A N +L I L+ Q ++V D+ K V+ H Y ++ + +
Sbjct: 179 ATANEILKEIQELAFETP---------QVIDVTEEDQSK-----GVIHHYYLNYPSRKLV 224
Query: 435 KVLYIVGKDSKFQNLV 450
L + FQ L+
Sbjct: 225 DALRRLAYLPDFQGLI 240
>gi|281344701|gb|EFB20285.1| hypothetical protein PANDA_020280 [Ailuropoda melanoleuca]
Length = 645
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 149/332 (44%), Gaps = 36/332 (10%)
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLR 303
I+R+E+ GP +L L ++E A +V + C G+ ++ + G + QI +
Sbjct: 308 ISREER-----NGPGMLVLTPTRELALQVEAECSKYSYKGLKSICIFGGRNREQQIRDI- 361
Query: 304 SCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKP--H 360
+ + +++TP RL L +++ ++ LV+D D L G +++ + +P
Sbjct: 362 TKGIDIIIATPGRLNYLQMNNFVNLQSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQ 421
Query: 361 TVV----FNDCL-----TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDE 411
TV+ ++D + +Y P + + +G+++ +++N + Q+V + +E
Sbjct: 422 TVMISATWSDTIHQLGQSYLKEPMI--VYVGTLDLVAVN--------TVTQNVIITTQEE 471
Query: 412 EKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHI 471
++ L + + + D KV+ V + +L S L +G ++ + H
Sbjct: 472 KRSLLQEFLQNRSPQD-------KVIVFVRRRLVADDLSSDLSIQGITVQSLHGDRDQHD 524
Query: 472 KNSVEADGRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSG 530
+ D R +I D S ++ + V DF +++ YV + R +G
Sbjct: 525 RERALEDFRSGKVKVLIATDLASRGLDVNDITHVYNYDFPRNIEEYVHRVGRTGRAGKTG 584
Query: 531 ILHSFFTKDDAAHAGQMIEILEQCGQVVPDAL 562
+ + T++D A ++I+IL++ Q VP+ L
Sbjct: 585 LSITLMTQNDWKIATELIKILKRANQSVPEDL 616
>gi|328697425|ref|XP_003240334.1| PREDICTED: ATP-dependent RNA helicase p62-like isoform 2
[Acyrthosiphon pisum]
Length = 516
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 159/381 (41%), Gaps = 34/381 (8%)
Query: 190 MRHDGVEQDNPLFVNSWGIEFWKCYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARK 247
+R++G + P+ W I S K+++ +GS T+ V + K
Sbjct: 117 IRNEGFTEPTPIQAQGWPIAM-----SGKNMVGVAQTGSGKTLGYTLPAVVHINNQEPLK 171
Query: 248 EKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCE 306
+ +G P L L ++E A +++ V ++ + + ++ GA HQ L +
Sbjct: 172 KGDG-----PIALVLAPTRELAQQIQKVAGLFNQSTYLRSTCIYGGAPKSHQARDLMNGV 226
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFN 365
E +++TP RLL + +A ++ + LV+D D + IR+ I +P V
Sbjct: 227 -EIVIATPGRLLDFLESRATNLQRCTYLVLDEADRMLDMGFEPQIRKIIQQIRPDRQVLM 285
Query: 366 DCLTYT-SVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEK-----ILKGIQ 419
T+ V + N L +L++ S + I+Q+V+VC E++ +L+ I
Sbjct: 286 WSATWPKEVQKLANDFLSDYIQLNVGSLTLSANHNILQNVDVCQEHEKEDKLMDLLQDIA 345
Query: 420 VLDHAYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSI-STGSNCIVSHIKNSVEAD 478
++ F KV I K ++ + + I S H+
Sbjct: 346 NMEENKTIIFAETKRKVDTITRK-------ITNMGARAVGIHGDKSQSERDHVLKQFRG- 397
Query: 479 GRKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFT 537
GR A ++ D + ++++ + VI D+ + ++Y+ + R + G ++FFT
Sbjct: 398 GR---ANILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSSQKGTSYAFFT 454
Query: 538 KDDAAHAGQMIEILEQCGQVV 558
++ A ++ +L + Q +
Sbjct: 455 HSNSKQAKDLVAVLTEANQRI 475
>gi|154418331|ref|XP_001582184.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916417|gb|EAY21198.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 640
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 151/364 (41%), Gaps = 27/364 (7%)
Query: 213 CYSSAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAA 270
C S +DI+ +GS T+ A+I+ +A+ + + L ++E A
Sbjct: 134 CILSGRDIIGCAVTGSGKTL---AFIIPCLLHVLAQPPTGQYEAAA---VILSPTRELAY 187
Query: 271 KVRSVCKPLKAFGI---HTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAID 327
+ C+ K F + + L G I++Q+ +++ +++TP R + L+S A +
Sbjct: 188 QTHIECQ--KIFSLMDKKSACLVGGNDIENQLRAIKNGS-NVIIATPGRFIDLLSSSAFN 244
Query: 328 VSGVSLLVVDRLDSL-SKGDTLSLIR--QSISGKPHTVVFNDCLTYTSVPAVQNLLLGSI 384
+ VS LV+D D + G +IR + + T++F+ +T + LL SI
Sbjct: 245 IKKVSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTLMFSATFPHTVERIARKLLQNSI 304
Query: 385 NRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPLKVLYIVGKDS 444
+ ++V + + I QS+ V D + L GD ++ + L
Sbjct: 305 EIVVGLRNVVTPN--INQSILVTNEDNK-----FNSLLKILGD--YTTQGQALVFTNTQD 355
Query: 445 KFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRK-RPAVSMIDKDHISTAELEEYEV 503
+ ++L L GYS+ + S +NS+ D R+ R +V ++ ++
Sbjct: 356 RAEDLFGKLNKSGYSVGLLHGSMDSPDRNSILHDFREGRFSVLVLTSVGARGIDIASIIC 415
Query: 504 VIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALR 563
VI D +YV + R G +F T D A + +++ G +P L
Sbjct: 416 VINYDAPDHEADYVHRVGRTGRAGKKGYAFTFVTDKDKTAAAGIKNAMKKSGCEIPKDLE 475
Query: 564 DLCH 567
DLC
Sbjct: 476 DLCQ 479
>gi|432871168|ref|XP_004071866.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Oryzias
latipes]
Length = 624
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 132/307 (42%), Gaps = 10/307 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 175 GPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 233
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 234 GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 293
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L ++++ S + I+Q V+VC +D EK K +++L+ + +
Sbjct: 294 VRQLAEDFLKEYVQINVGALQLSANHNILQIVDVC-TDGEKENKLVRLLEEIMSEKEN-- 350
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 351 --KTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDV 408
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ + ++Y+ + AR + +G ++FFT ++ A +I +L
Sbjct: 409 ASRGLDVEDVKFVINYDYPNNSEDYIHRIGRTARSSKTGTAYTFFTANNMRQASDLIAVL 468
Query: 552 EQCGQVV 558
+ Q +
Sbjct: 469 REANQAI 475
>gi|393218978|gb|EJD04466.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 681
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 141/319 (44%), Gaps = 27/319 (8%)
Query: 259 LLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERL 317
+L + ++E A + L K FG+ +V+++ G D Q L +V TP R+
Sbjct: 328 VLVVAPTRELALQTHETFTELGKPFGLTSVAVYGGVDKDPQRRALSQVGAAMVVGTPGRI 387
Query: 318 LKLVSLKAIDVSGVSLLVVDRLDS-LSKG---DTLSLIRQ-SISGKPHTVVFNDCLTYTS 372
L LV+ A D+SGV+ LV+D D L KG D ++I Q + S + T++F+ +
Sbjct: 388 LDLVNEGACDLSGVTYLVLDEADRMLDKGFENDIRAIIAQCAPSKQRQTLMFS-----AT 442
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSAC----IIQSVNVCASDEEK---ILKGIQVLDHAY 425
P L + R + +V S + Q V V EK +L +Q L
Sbjct: 443 WPDAVRRLASTFQRNPVRITVGSDDLTANRRVEQVVEVFDDQYEKDSRLLSHLQKLKPQN 502
Query: 426 G---DHFHSEP---LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADG 479
G HS+P ++L V + + TL +S+S+ + + S +
Sbjct: 503 GRSNTQSHSQPQDDTRILVFVLYKKEATRVEQTLLRHKFSVSSIHGDLSQSARISALENF 562
Query: 480 RKRPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTK 538
+K ++ D + ++ +V+ F +++++YV + R SG +FFT
Sbjct: 563 KKGETQILVATDVAARGLDIPSVGLVLNYSFPLTVEDYVHRIGRTGRGGRSGKSITFFTG 622
Query: 539 D--DAAHAGQMIEILEQCG 555
D + A AG++ +++ + G
Sbjct: 623 DNHEKALAGELAKVMREGG 641
>gi|414084773|ref|YP_006993484.1| DEAD/DEAH box helicase [Carnobacterium maltaromaticum LMA28]
gi|412998360|emb|CCO12169.1| DEAD/DEAH box helicase family protein [Carnobacterium
maltaromaticum LMA28]
Length = 397
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 260 LFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
+ + SQE A +V +V K K GI L GA+I Q+ L+ +PE +V T R+L
Sbjct: 68 VIITPSQELAVQVAAVVKEWAKEVGITVQPLIGGASIKRQLEKLKQ-KPEIVVGTAGRIL 126
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFN 365
++ +K + + V+ +++D D L + D L+ +R+ I KP F+
Sbjct: 127 EISEMKKLKLHQVATVILDEADQLLQQDQLATVRKVVAKIPNKPQLAFFS 176
>gi|383852806|ref|XP_003701916.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Megachile
rotundata]
Length = 615
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 160/401 (39%), Gaps = 52/401 (12%)
Query: 188 NAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADS 243
N +R G + + W I S +D+ + +GS T+ I A +
Sbjct: 126 NEIRRQGFGEPTAIQAQGWPIAL-----SGRDMVGIAQTGSGKTLAYILPAIVHINQQPR 180
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT----VSLHPGAAIDHQI 299
+ R + GP L L ++E A +++ V FG+ + + GA Q
Sbjct: 181 LNRGD-------GPIALILAPTRELAQQIQQVAS---DFGVSSQVRNTCIFGGAPKGPQA 230
Query: 300 TGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-K 358
L E ++TP RL+ + ++ + LV+D D + IR+ + +
Sbjct: 231 RDLERGV-EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIR 289
Query: 359 PHTVVFNDCLTYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKIL 415
P T+ V+NL L ++++ + + I+Q V+VC + EK
Sbjct: 290 PDRQTLMWSATWPK--EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVC-EEFEKEG 346
Query: 416 KGIQVLDHAYGDHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSI--------STGSNC 466
K +++L+ +EP K + V K ++ + G+ +
Sbjct: 347 KLMKLLEE-----ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDY 401
Query: 467 IVSHIKNSVEADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARH 526
+++ +NS R A+ + ++E+ + VI D+ + ++YV + R
Sbjct: 402 VLNQFRNS-------RSAILVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRS 454
Query: 527 TVSGILHSFFTKDDAAHAGQMIEILEQCGQVVPDALRDLCH 567
+G ++FFT +A A +I++LE+ QVV L +L
Sbjct: 455 QRTGTAYAFFTPGNAHKASDLIQVLEEAKQVVNPKLYELSR 495
>gi|405982644|ref|ZP_11040955.1| hypothetical protein HMPREF9451_00030 [Slackia piriformis YIT
12062]
gi|404389353|gb|EJZ84429.1| hypothetical protein HMPREF9451_00030 [Slackia piriformis YIT
12062]
Length = 653
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTV-SLHPGAAIDHQITGLRSCEPEFLVSTP 314
GPF+L + ++E A+++ C P+ H + + G + D QI L + ++TP
Sbjct: 54 GPFMLVITPTRELASQISDTCMPIGKHTRHFIGTFVGGVSYDPQIRKLERGL-DVAIATP 112
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
RL+ L+ AID++ V +LV+D D +
Sbjct: 113 GRLIDLMERGAIDLNSVEILVLDEADRM 140
>gi|340504430|gb|EGR30873.1| hypothetical protein IMG5_122040 [Ichthyophthirius multifiliis]
Length = 510
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 248 EKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCE 306
+KE P L LV ++E A +V+ C KA+ ++ +++ GA+ Q L+ +
Sbjct: 176 QKEKRERKNPVGLILVPTRELANQVQLECAKFGKAYKAYSTAIYGGASRSVQEQHLQK-K 234
Query: 307 PEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
PE +V+TP RL+ V KA+D+ ++ LV+D D +
Sbjct: 235 PEIVVATPGRLIDFVQSKAVDLRTITYLVLDEADRM 270
>gi|332244020|ref|XP_003271168.1| PREDICTED: probable ATP-dependent RNA helicase DDX43 [Nomascus
leucogenys]
Length = 649
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 15/311 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPER 316
P +L L ++E A +V C G+ +V ++ G D QI LR + +++TP R
Sbjct: 318 PGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELRKGV-DIIIATPGR 376
Query: 317 LLKLVSLKAIDVSGVSLLVVDRLDS-LSKGDTLSLIRQSISGKPHTVVFNDCLTYTSVPA 375
L L +++ ++ LV+D D L G +++ + +P +T + P
Sbjct: 377 LNDLQMNNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDR---QTVMTSATWPH 433
Query: 376 VQNLLLGSINRLSLNQSVASQSACIIQSV--NVCASDEEKILKGIQVLDHAYGDHFHSEP 433
+ L S + + V + + SV N+ + EE+ +Q S
Sbjct: 434 SVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQNM-----SST 488
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
KV+ V + + +L S L SI + + + K V ++ +
Sbjct: 489 DKVIVFVSRKAVVDHLSSDLILGNISIESLHGDREQRDREKA-LENFKTGKVRILIATDL 547
Query: 494 STAELEEYEVVIVP--DFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
++ L+ ++V V DF +++ YV + R +G+ + T++D A ++I IL
Sbjct: 548 ASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINIL 607
Query: 552 EQCGQVVPDAL 562
E+ Q +P+ L
Sbjct: 608 ERANQSIPEEL 618
>gi|417943104|ref|ZP_12586359.1| Putative ATP-dependent RNA helicase [Bifidobacterium breve CECT
7263]
gi|376165915|gb|EHS84843.1| Putative ATP-dependent RNA helicase [Bifidobacterium breve CECT
7263]
Length = 675
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 257 PFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
P L L ++E A ++ V PL + FG++T +++ G HQ+ L++ + +V+ P
Sbjct: 126 PRGLVLAPTRELANQINDVLMPLARTFGMNTTTIYGGVKYIHQVRDLKAGA-DIVVACPG 184
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCLTYTS 372
RL L+ KA+ +S V ++V+D D ++ L ++ + IS ++F+ L +
Sbjct: 185 RLEDLLRQKALTLSSVEVVVIDEADEMADMGFLPPVKRLLEQISPNAQHMLFSATLDH-G 243
Query: 373 VPAVQNLLL 381
V V N L
Sbjct: 244 VDEVVNTFL 252
>gi|365093472|ref|ZP_09330537.1| dead/deah box helicase domain-containing protein [Acidovorax sp.
NO-1]
gi|363414352|gb|EHL21502.1| dead/deah box helicase domain-containing protein [Acidovorax sp.
NO-1]
Length = 427
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 18/291 (6%)
Query: 260 LFLVSSQEKAAKVRSVCKPLKAFGIHTVSL---HPGAAIDHQITGLRSCEPEFLVSTPER 316
L LV ++E AA+V V + L + + + G +I+ Q+ GLR + +V+TP R
Sbjct: 77 LVLVPTRELAAQVGEVLRSLAQHLLQPLKIAIVFGGVSINPQMLGLRGGA-DIVVATPGR 135
Query: 317 LLKLVSLKAIDVSGVSLLVV---DRLDSLSKGDTLSLIRQSISGKPHTVVFNDCLTYTSV 373
LL LV A+ + V+ LV+ DRL L + L + + + + F+ T V
Sbjct: 136 LLDLVEHNALRLGAVAHLVLDEADRLLDLGFAEELQRVLALLPAQRQNLFFSATFPAT-V 194
Query: 374 PAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEP 433
+ + LL + R+ + + + A +++ V AS + Q+L H +H S
Sbjct: 195 QTLADGLLKNPVRVEVPHTPGKEPAIEQRAIAVDAS------RRTQLLRHLVKEHNWS-- 246
Query: 434 LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDHI 493
+VL V +++ L G + + ++ V + + ++ D
Sbjct: 247 -RVLVFVATQYAAEHVAEKLYKAGIYATPFHGGLSQGARSQVLQEFKDERWQVVVTTDLA 305
Query: 494 STA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAH 543
+ ++ + V+ D S +YV + R SG+ SF T D AH
Sbjct: 306 ARGIDIAQLPAVVNYDLPRSAVDYVHRIGRTGRAGESGVAVSFVTADAEAH 356
>gi|347534719|ref|YP_004841389.1| hypothetical protein LSA_10610 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504775|gb|AEN99457.1| hypothetical protein LSA_10610 [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 447
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 221 LETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLK 280
L +GS T+ A+++ A+ +A + G L + SQE A +V S+ +
Sbjct: 52 LSPTGSGKTV---AFLMPILANIMAGE--------GTQALIVEPSQELAMQVTSIIRDWA 100
Query: 281 A-FGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRL 339
F + + L GA + Q L+ PE +V TP R+L L+ + + V+ V +V+D
Sbjct: 101 GPFKVKILPLIGGANVKRQQEQLKK-RPEIVVGTPGRILSLLDERKLKVNHVDTVVIDEA 159
Query: 340 DSLSKGDTLSLIRQSISGKPH 360
D L + D+L RQ ++ P
Sbjct: 160 DDLLQDDSLEKARQIVAAVPR 180
>gi|425745539|ref|ZP_18863583.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-323]
gi|425488547|gb|EKU54882.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-323]
Length = 383
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 130/316 (41%), Gaps = 25/316 (7%)
Query: 254 FTG-PFLLFLVSSQEKAAKVRSVCKPLKAF-GIHTVSLHPGAAIDHQITGLRSCEPEFLV 311
F G P L L ++E A ++ S + L F +H V+L G + Q L + +V
Sbjct: 75 FRGEPRALILAPTRELALQIESDAQALTKFSNLHLVTLLGGVDFEKQKKMLDRNFVDIIV 134
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKP-----HTVVFND 366
+TP RL+ V K + + + LV+D D L + +++ + P T++F+
Sbjct: 135 ATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSVKRIVRFSPFKEQRQTLMFSA 194
Query: 367 CLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYG 426
+Y + + L + + + + + + V D+ K+L+ I
Sbjct: 195 TFSYDVLNLARQWLFEPVT-VEIEPEQKTNTDVEQRVYVVAKEDKYKLLQEI-------- 245
Query: 427 DHFHSEPL-KVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
EP+ KV+ + + + L LK GY + S I + + ++
Sbjct: 246 --LREEPIDKVMIFANRRDQVRRLYDHLKRDGYRVGMLSGEIAQDKRLKMLDQFKQGKNN 303
Query: 486 SMIDKDHISTAELEEYEVVIVPDFIISMK--NYVEILTSMARHTVSGILHSFFTKDDAAH 543
MI D ++ + V V +F + + +YV + R G+ SF ++DDA +
Sbjct: 304 IMIATD-VAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDAFY 362
Query: 544 AGQMIEILEQCGQVVP 559
+ EI + G+ +P
Sbjct: 363 ---LPEIEKAIGKKLP 375
>gi|312375424|gb|EFR22803.1| hypothetical protein AND_14200 [Anopheles darlingi]
Length = 971
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 142/326 (43%), Gaps = 21/326 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHT------VSLHPGAAIDHQITGLRSCEPEF 309
GP +L L ++E A ++++V ++ FG H+ + GA Q+ L E
Sbjct: 340 GPIVLVLAPTRELAQQIQTV---VREFGNHSKPNIRYTCIFGGALKGPQVRDLERGV-EV 395
Query: 310 LVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCL 368
+++TP RL+ + ++ + LV+D D + IR+ + +P V
Sbjct: 396 VIATPGRLIDFLERGITNLHRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQVLMWSA 455
Query: 369 TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAY 425
T+ VQ L L ++++ + + I Q V+VC +E++ + + A
Sbjct: 456 TWPK--EVQTLAEDFLRDYIQINIGSLSLAANHNIHQIVDVCEENEKESKLLKLLKEIAS 513
Query: 426 GDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAV 485
D + K++ V K +L+ + GY ++ ++ V D R +
Sbjct: 514 TDASN----KIIIFVETKKKVDDLLKNIVRDGYGATSIHGDKSQSERDYVLQDFRHGKST 569
Query: 486 SMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHA 544
++ D + ++E+ + VI D+ S ++Y+ + R + G +SFFT ++ A
Sbjct: 570 ILVATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCSQYGTAYSFFTPNNGRQA 629
Query: 545 GQMIEILEQCGQVVPDALRDLCHTSP 570
+++ +LE+ GQ L ++ +P
Sbjct: 630 RELLSVLEEAGQQPTVELVEMAKQTP 655
>gi|183979315|dbj|BAG30754.1| DEAD box polypeptide 5 [Papilio xuthus]
Length = 539
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 129/316 (40%), Gaps = 10/316 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V C A + + GA Q L E +++TP
Sbjct: 180 GPIALVLAPTRELAQQIQQVACDFGNASYVRNTCVFGGAPKREQARDLERGV-EIVIATP 238
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P T+
Sbjct: 239 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 298
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + LG ++++ S + I+Q V+VC E++ + VL G E
Sbjct: 299 VKKLAEDYLGDYLQINIGSLQLSANHNILQIVDVCQEHEKE--NKLNVLLQEIGQS--QE 354
Query: 433 P-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
P K + V K +N+ ++ G+ ++ V ++ A ++ D
Sbjct: 355 PGAKTIIFVETKRKVENITRNIRRFGWPAVCMHGDKTQQERDDVLYQFKQGRASILVATD 414
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ +++ + VI D+ S ++Y+ + R G ++FFT ++ A ++ +
Sbjct: 415 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVNV 474
Query: 551 LEQCGQVVPDALRDLC 566
L++ Q + L+ +
Sbjct: 475 LQEANQTISPQLQTMA 490
>gi|401881497|gb|EJT45796.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 2479]
gi|406696503|gb|EKC99788.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 1120
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 133/326 (40%), Gaps = 24/326 (7%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A ++ KP K + G +I I ++ E +V TP
Sbjct: 525 GPIALILAPTRELAMQIYKESKPFAKVMNLRVTCCVGGQSISDDIAAMKKGA-EIVVCTP 583
Query: 315 ERLLKLVSL---KAIDVSGVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCL 368
R++ L++ + ++ ++ +V+D D + G +++ + +P V+F+
Sbjct: 584 GRMIDLLTANNGRVTNLRRITFMVMDEADRMFDMGFEPQVMKIVNNTRPDAQKVLFSATF 643
Query: 369 TYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDH 428
T + +L+ + +SV + I Q V V +D K + +++L DH
Sbjct: 644 PKTMESLARKILVKPLEITVGGRSVVAPE--IDQRVEVRDADT-KFNRLLEILGEIGQDH 700
Query: 429 FHSEPLKVLYIVGKDSKFQNLVSTLKCKGY---SISTGSNCIVSH--IKNSVEADGRKRP 483
+VL V + L L +GY S+ G + + I+N D
Sbjct: 701 PDEPDYRVLIFVDRQESADELFRELLQRGYLCTSLHGGKDQVDREDAIRNFKSGD----- 755
Query: 484 AVSMIDKDHISTAELE--EYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDA 541
+ ++ ++ L+ + ++VI D M++YV R +G +F T D
Sbjct: 756 -IPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNTGTCITFITPDQE 814
Query: 542 AHAGQMIEILEQCGQVVPDALRDLCH 567
+ + LE G VPD L+++
Sbjct: 815 KFSVDIARALEASGAFVPDKLKEMSE 840
>gi|392530289|ref|ZP_10277426.1| putative ATP-dependent RNA helicase [Carnobacterium maltaromaticum
ATCC 35586]
Length = 419
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 260 LFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLL 318
+ + SQE A +V +V K K GI L GA+I Q+ L+ +PE +V T R+L
Sbjct: 68 VIITPSQELAVQVAAVVKEWAKEVGITVQPLIGGASIKRQLEKLKQ-KPEIVVGTAGRIL 126
Query: 319 KLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQ---SISGKPHTVVFN 365
++ +K + + V+ +++D D L + D L+ +R+ I KP F+
Sbjct: 127 EISEMKKLKLHQVATVILDEADQLLQQDQLATVRKVVAKIPNKPQLAFFS 176
>gi|119471950|ref|ZP_01614235.1| ATP-dependent RNA helicase, DEAD box family protein
[Alteromonadales bacterium TW-7]
gi|119445208|gb|EAW26499.1| ATP-dependent RNA helicase, DEAD box family protein
[Alteromonadales bacterium TW-7]
Length = 440
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 186 IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETS--GSSSTIVQIAWIVATAADS 243
+E + H G+ Q P + + + + DI S GS T+ A+++
Sbjct: 12 LETQLAHQGITQ--PTDIQAHAVP---TALAGHDIFAQSKTGSGKTL---AFLLPAVQRV 63
Query: 244 IARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKA-FGIHTVSLHPGAAIDHQITGL 302
+ +K S P +L + ++E A +V + + L A I V + G + QI L
Sbjct: 64 MKQK---ALSKRDPRVLIVAPTRELATQVFTQLRLLIAGTAIKAVKVLGGENFNDQIKAL 120
Query: 303 RSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLD---SLSKGDTLSLIRQSISGK- 358
R+ +P+F+V+TP RL V+ +++ +SG+ LL+ D D L + L LI + +
Sbjct: 121 RN-DPQFVVATPGRLADHVTKRSLQLSGLELLIFDEADRILDLGFTEQLKLINDEANHRL 179
Query: 359 PHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVC 407
T++F+ L + V A+ LL +++L+ + Q + I Q++ +
Sbjct: 180 RQTLLFSATLDHAQVDALSRNLLKKPKQITLS-AANEQHSDITQTLYLA 227
>gi|109130176|ref|XP_001087519.1| PREDICTED: probable ATP-dependent RNA helicase DDX53-like [Macaca
mulatta]
Length = 592
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 31/320 (9%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPE 315
GP +L L ++E A +V + C + ++ + G QI + S + + +++TP
Sbjct: 256 GPGMLVLTPTRELALQVEAECSKYSYKDLKSICICGGRNRIGQIEDI-SKDVDIIIATPG 314
Query: 316 RLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLI----------RQS--ISGKPHTVV 363
RL L ++++ ++ LV+D D + + I RQ+ IS V
Sbjct: 315 RLNDLQMNNSVNLRSITYLVMDEADKMLDMEFEPQIMKILLDVHPDRQTVMISATWPDTV 374
Query: 364 FNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
+Y P + + +G++N ++N + Q++ V +E++ L + +
Sbjct: 375 RRLARSYLKDPMI--VYVGNLNLAAVN--------TVKQNIIVTTEEEKRALTQEFIENM 424
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
+ D KV+ V + +L S +G S+ + K D
Sbjct: 425 SPND-------KVIMFVSQKRIADDLSSDFNIQGISVESLHGNSEESDKERALQDFESGN 477
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
+I D ++ ++ + V DF +++ YV + + R +G + T+ DA
Sbjct: 478 IKILITTDLVARGLDVNDVTHVYNYDFPWNIEEYVHRVGRIGRAGKTGTSVTLITQRDAK 537
Query: 543 HAGQMIEILEQCGQVVPDAL 562
AG++I+ILE+ Q VP+ L
Sbjct: 538 MAGELIKILERANQSVPEDL 557
>gi|389614656|dbj|BAM20360.1| DEAD box ATP-dependent RNA helicase [Papilio polytes]
Length = 539
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 129/316 (40%), Gaps = 10/316 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSV-CKPLKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +++ V C A + + GA Q L E +++TP
Sbjct: 179 GPIALVLAPTRELAQQIQQVACDFGNASYVRNTCVFGGAPKREQARDLERGV-EIVIATP 237
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ I +P T+
Sbjct: 238 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 297
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + LG ++++ S + I+Q V+VC E++ + VL G E
Sbjct: 298 VKKLAEDYLGDYLQINIGSLQLSANHNILQIVDVCQEHEKE--NKLNVLLQEIGQS--QE 353
Query: 433 P-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKD 491
P K + V K +N+ ++ G+ ++ V ++ A ++ D
Sbjct: 354 PGAKTIIFVETKRKVENITRNIRRFGWPAVCMHGDKTQQERDDVLYQFKQGRASILVATD 413
Query: 492 HISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEI 550
+ +++ + VI D+ S ++Y+ + R G ++FFT ++ A ++ +
Sbjct: 414 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVNV 473
Query: 551 LEQCGQVVPDALRDLC 566
L++ Q + L+ +
Sbjct: 474 LQEANQTISPQLQTMA 489
>gi|363753554|ref|XP_003646993.1| hypothetical protein Ecym_5422 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890629|gb|AET40176.1| hypothetical protein Ecym_5422 [Eremothecium cymbalariae
DBVPG#7215]
Length = 560
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 20/316 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP +L L ++E A +++ C FG I ++ G QI L+ E L+
Sbjct: 196 GPIVLVLAPTRELAVQIQKECS---KFGHSSRIRNTCVYGGVPKSQQIRDLQRGV-EILI 251
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTY 370
+TP RL+ ++ + ++ V+ LV+D D + IR+ + +P T+
Sbjct: 252 ATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 311
Query: 371 TSVPAVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGD 427
VQ L ++ ++++ + S I Q V V SD EK + ++ LD A D
Sbjct: 312 PK--EVQQLARDYLHDPIQVNIGSLELAASHTITQIVEVI-SDFEKRDRLVKHLDIASKD 368
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
K++ ++ S L+ G+ ++ V + R + M
Sbjct: 369 ----PESKIIIFASTKRTCDDITSYLRQDGWPALAIHGDKQQQERDWVLNEFRCGRSPIM 424
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D + +++ VI D ++++YV + R +G SFFT+ A Q
Sbjct: 425 VATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQSKALGAQ 484
Query: 547 MIEILEQCGQVVPDAL 562
+I I+ + Q +P L
Sbjct: 485 LISIMREAKQEIPQDL 500
>gi|387018192|gb|AFJ51214.1| putative ATP-dependent RNA helicase DDX5-like [Crotalus adamanteus]
Length = 600
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 163 GPICLVLAPTRELAQQVQQVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 221
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 222 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKE 281
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 282 VRQLAEDFLKEYVHINIGALELSANHNILQIVDVC-HDVEKDDKLIRLMEEIMSEKEN-- 338
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 339 --KTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDV 396
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +L
Sbjct: 397 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVL 456
Query: 552 EQCGQVVPDALRDL 565
+ Q + L L
Sbjct: 457 REANQAINPKLLQL 470
>gi|326930919|ref|XP_003211585.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Meleagris
gallopavo]
Length = 597
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 157 GPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 215
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 216 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 275
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 276 VRQLAEDFLKEYVHINIGALELSANHNILQIVDVC-HDVEKDDKLIRLMEEIMSEKEN-- 332
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 333 --KTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDV 390
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +L
Sbjct: 391 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVL 450
Query: 552 EQCGQVVPDALRDL 565
+ Q + L L
Sbjct: 451 REANQAINPKLLQL 464
>gi|195998213|ref|XP_002108975.1| hypothetical protein TRIADDRAFT_63563 [Trichoplax adhaerens]
gi|190589751|gb|EDV29773.1| hypothetical protein TRIADDRAFT_63563 [Trichoplax adhaerens]
Length = 654
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 15/315 (4%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V SV I+ ++ G+ Q+ L S E V+TP
Sbjct: 152 GPIALILCPTRELAQQVHSVSTTFGRLARINCACIYGGSPKGPQLREL-SRGVEICVATP 210
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGK--PHTVVFNDCLTYTS 372
RLL + + +++ S LV+D D + I+Q I P V
Sbjct: 211 GRLLDFLESRRTNLNRCSYLVLDEADRMLDMGFEPQIKQIIGSIKCPRQTVMWSATWPKE 270
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
+ + L ++++ S + + I Q V VC +EEK K ++L D +
Sbjct: 271 IRTLAREFLRDYVQINIGSSDLTTNHNIKQIVEVC-REEEKEDKLCKLL----SDILRQD 325
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSIST--GSNCIVSHIKNSVEADGRKRPAVSMIDK 490
K + V K L L G+ + G C ++ V ++ R +I
Sbjct: 326 EKKTIVFVETKKKSDYLSRRLVRSGWPVLCIHGDKC--QSERDRVLSEFRSGRIPVLIAT 383
Query: 491 DHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIE 549
D + ++ + ++VI DF + ++YV + AR +G ++FFT + + +I
Sbjct: 384 DVAARGLDISDVKLVINYDFPNNSEDYVHRIGRTARSGKTGTAYTFFTASNIRQSPNLIA 443
Query: 550 ILEQCGQVV-PDALR 563
+L + Q + PD ++
Sbjct: 444 LLREANQPINPDLIQ 458
>gi|323507844|emb|CBQ67715.1| probable RNA helicase dbp2 (DEAD box protein) [Sporisorium
reilianum SRZ2]
Length = 536
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 138/323 (42%), Gaps = 29/323 (8%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPLKAFG----IHTVSLHPGAAIDHQITGLRSCEPEFLV 311
GP L L ++E A +++ C FG + T +++ G QI L+ E +
Sbjct: 186 GPIALILAPTRELANQIQVECN---RFGGSSRLRTCAVYGGVPKGPQIRDLQRGA-EICI 241
Query: 312 STPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIR---QSISGKPHTVVFNDCL 368
+TP RL+ +V ++ V+ LV+D D + IR Q I T++F
Sbjct: 242 ATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMF---- 297
Query: 369 TYTSVPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDEE--KILKGIQVLDH 423
+ T VQ L L + ++++ + + + + Q + VC E+ K++ ++++
Sbjct: 298 SATWPKEVQRLAGDFLNNFAQVNIGSTELAANHNVKQIIEVCTEFEKRGKLIGHLELISA 357
Query: 424 AYGDHFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRP 483
G KV+ ++ L+ G+ ++ V A+ +
Sbjct: 358 DNG--------KVIIFTSTKRVADDITKFLRQDGWPALAIHGDKQQQERDWVLAEFKSGR 409
Query: 484 AVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAA 542
+ M+ S ++++ VI DF + ++YV + R +G +++FT +++
Sbjct: 410 SPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSK 469
Query: 543 HAGQMIEILEQCGQVVPDALRDL 565
A +++ IL + Q +P + ++
Sbjct: 470 SARELVGILREAKQEIPREIEEM 492
>gi|45382259|ref|NP_990158.1| probable ATP-dependent RNA helicase DDX5 [Gallus gallus]
gi|5114446|gb|AAD40318.1|AF158370_1 DEAD-box RNA helicase [Gallus gallus]
Length = 595
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 155 GPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 213
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 214 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 273
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 274 VRQLAEDFLKEYVHINIGALELSANHNILQIVDVC-HDVEKDDKLIRLMEEIMSEKEN-- 330
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 331 --KTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDV 388
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +L
Sbjct: 389 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVL 448
Query: 552 EQCGQVVPDALRDL 565
+ Q + L L
Sbjct: 449 REANQAINPKLLQL 462
>gi|343426178|emb|CBQ69709.1| probable ROK1-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 614
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 17/262 (6%)
Query: 308 EFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISGKPHTVVFNDC 367
+ L++TP RL+ V + +D+S V LV+D D L + L+ ++ H +
Sbjct: 299 DVLITTPLRLVHAVEKEEVDLSNVRHLVLDEADRLLEEGFLAQTDTILAACSHARLRKAL 358
Query: 368 LTYTSVPAVQNL----LLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDH 423
+ T + V+ + ++ + + A+++ I Q + S++ K+ H
Sbjct: 359 FSATLLAGVEEMARTFMVDECRVIVGTKDAATET--IQQELQFVGSEDGKL--------H 408
Query: 424 AYGDHFHSEPLK--VLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRK 481
A LK VL V + ++L L G + + + SV A R+
Sbjct: 409 ALRALMQQGGLKPPVLLFVQSIERAKHLFHELVYDGLHVDVIHSERPKLQRESVVAAFRR 468
Query: 482 RPAVSMIDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDD 540
+I + ++ + + ++VI DF S+++Y+ + R G ++FTK+D
Sbjct: 469 GDVWVLICTELMARGIDFKGVQLVINYDFPQSVQSYIHRIGRTGRAGRQGRAITYFTKED 528
Query: 541 AAHAGQMIEILEQCGQVVPDAL 562
AAH ++ ++ Q G VP+ +
Sbjct: 529 AAHLKTVVNVMRQSGCEVPEWM 550
>gi|307129391|ref|YP_003881407.1| ATP-dependent RNA helicase [Dickeya dadantii 3937]
gi|306526920|gb|ADM96850.1| ATP-dependent RNA helicase [Dickeya dadantii 3937]
Length = 631
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 176 SKFLILCLNA-IENAMRHDGVEQDNPLFVNSWGIEFWKCYSSAKDILETSGSSSTIVQIA 234
+ F L L+A I NA+ G E+ +P+ E + +D+L + + S
Sbjct: 6 TSFASLGLSAPILNALSEMGYEKPSPIQA-----ECIPHLLNGRDVLGMAQTGSG----- 55
Query: 235 WIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVRSVCKPLKAF--GIHTVSLHPG 292
TAA S+ P LL L ++E A +V C G++ V+L+ G
Sbjct: 56 ---KTAAFSLPLLNNIKADLKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGG 112
Query: 293 AAIDHQITGLRSCEPEFLVSTPERLLKLVSLKAIDVSGVSLLVVDRLDSL 342
D Q+ LR P+ +V TP RLL + +D+S +S LV+D D +
Sbjct: 113 QRYDVQLRALRQG-PQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEM 161
>gi|50293017|ref|XP_448941.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661092|sp|Q6FLF3.1|DBP2_CANGA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49528254|emb|CAG61911.1| unnamed protein product [Candida glabrata]
Length = 544
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 131/314 (41%), Gaps = 16/314 (5%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A +++ C K+ I ++ G QI L R E +++T
Sbjct: 183 GPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAE--IVIAT 240
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS 372
P RL+ ++ ++ V+ LV+D D + IR+ + +P T+
Sbjct: 241 PGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 300
Query: 373 VPAVQNLLLGSIN---RLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
VQ L +N ++ + + S I Q V V S+ EK + ++ LD A D
Sbjct: 301 --EVQQLARDYLNDPIQVQIGSLELAASHNITQLVEVV-SEFEKRDRLVKHLDTASQD-- 355
Query: 430 HSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMID 489
+ K+L + S L+ G+ ++ V + R + M+
Sbjct: 356 --KESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVA 413
Query: 490 KDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMI 548
D + +++ V+ D ++++YV + R +G SFFT+D+ + +I
Sbjct: 414 TDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLI 473
Query: 549 EILEQCGQVVPDAL 562
I+ + Q +P+ L
Sbjct: 474 SIMREAKQNIPEEL 487
>gi|270016295|gb|EFA12741.1| Rm62 [Tribolium castaneum]
Length = 776
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 153/369 (41%), Gaps = 26/369 (7%)
Query: 198 DNPLFVNSWGIEFWKCYSSAKDI--LETSGSSSTIVQI--AWIVATAADSIARKEKEGFS 253
D P + + G W S KD+ + +GS T+ I A + SIAR +
Sbjct: 148 DTPTAIQAQG---WPIAMSGKDLVGIAQTGSGKTLAYILPAIVHINNQPSIARGD----- 199
Query: 254 FTGPFLLFLVSSQEKAAKVRSVCKPLKAFG-IHTVSLHPGAAIDHQITGLRSCEPEFLVS 312
GP L L ++E A +++ V + + + GA Q L E ++
Sbjct: 200 --GPIALVLAPTRELAQQIQQVAHDFGSSSYVRNTCIFGGAPKGPQARDLERG-VEICIA 256
Query: 313 TPERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KP--HTVVFNDCLT 369
TP RL+ + ++ + LV+D D + IR+ I +P T++++
Sbjct: 257 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 316
Query: 370 YTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHF 429
Q+ L + ++++ S + I+Q V+VC E++ + L G++
Sbjct: 317 KEVRKLAQDFLRNYV-QINIGSLQLSANHNILQIVDVCQEHEKET--KLNNLLQEIGNN- 372
Query: 430 HSEP-LKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMI 488
EP K++ V K +++ T++ G+ ++ V + R + +I
Sbjct: 373 -GEPGAKIIIFVETKKKVESITRTIRRYGWPAVCMHGDKSQQERDFVLREFRNGKSSILI 431
Query: 489 DKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQM 547
D + ++E + VI D+ S ++Y+ + R +G ++FFT + A +
Sbjct: 432 ATDVAARGLDVEGIKYVINYDYPNSSEDYIHRIGRTGRSDTTGTSYAFFTPSNFRQAKDL 491
Query: 548 IEILEQCGQ 556
+ +L++ Q
Sbjct: 492 VSVLKEANQ 500
>gi|327279490|ref|XP_003224489.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Anolis
carolinensis]
Length = 600
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 10/314 (3%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTP 314
GP L L ++E A +V+ V +A + + ++ GA QI L E ++TP
Sbjct: 163 GPICLVLAPTRELAQQVQQVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGV-EICIATP 221
Query: 315 ERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYT-S 372
RL+ + ++ + LV+D D + IR+ + +P T+
Sbjct: 222 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 281
Query: 373 VPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSE 432
V + L +++ S + I+Q V+VC D EK K I++++ + +
Sbjct: 282 VRQLAEDFLKEYVHINIGALELSANHNILQIVDVC-HDVEKDDKLIRLMEEIMSEKEN-- 338
Query: 433 PLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSMIDKDH 492
K + V + +L ++ G+ ++ V + + A +I D
Sbjct: 339 --KTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDV 396
Query: 493 ISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQMIEIL 551
S ++E+ + VI D+ S ++Y+ + AR T +G ++FFT ++ +I +L
Sbjct: 397 ASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVL 456
Query: 552 EQCGQVVPDALRDL 565
+ Q + L L
Sbjct: 457 REANQAINPKLLQL 470
>gi|254571525|ref|XP_002492872.1| RNA helicase in the DEAD-box family, necessary for prespliceosome
formation [Komagataella pastoris GS115]
gi|238032670|emb|CAY70693.1| RNA helicase in the DEAD-box family, necessary for prespliceosome
formation [Komagataella pastoris GS115]
gi|328353117|emb|CCA39515.1| ATP-dependent RNA helicase DDX46/PRP5 [Komagataella pastoris CBS
7435]
Length = 784
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 60/381 (15%)
Query: 216 SAKDIL--ETSGSSSTIVQIAWIVATAADSIARKEKEGFSFTGPFLLFLVSSQEKAAKVR 273
S KD++ +GS T+ A+++ I++ + E S GP + L ++E A ++
Sbjct: 251 SGKDLIGIAKTGSGKTL---AFLLPMFRQIISQPDPE--SGEGPIGVILTPTRELALQIF 305
Query: 274 SVCKP-LKAFGIHTVSLHPGAAIDHQITGLRSCEPEFLVSTPERLLKLV---SLKAIDVS 329
CKP +K+ + + ++ GA+I QI+ ++ F V TP RL+ L+ S + ++S
Sbjct: 306 KECKPFMKSLNLKGICVYGGASISQQISDIKK-RVHFAVCTPGRLIDLLTANSGRVTNLS 364
Query: 330 GVSLLVVDRLDSL-SKGDTLSLIRQSISGKP--HTVVFNDCLTYTSVPAVQNLLLGSINR 386
S LV+D D + G +++ + +P T+VF+ + +L +
Sbjct: 365 RTSYLVLDEADRMFDMGFEPQVMKIIPNTRPDRQTLVFSATFPPKMEALAKKVLNNPLEV 424
Query: 387 LSLNQSVASQSACIIQSVNVCASDEEKILKGIQVLDHAYGDHFHSEPL-KVLYIVGKDSK 445
+ +SV + + I Q V V +E+ K +++L G +P KVL V +
Sbjct: 425 IVGEKSVVADT--ITQKVFVI-DPQERFSKLLELL----GTFKSKDPTGKVLVFVERQDS 477
Query: 446 FQNLVSTLKCKGYS-------------------ISTGSNCIVSHIKNSVEADGRKRPAVS 486
L++ L +GY+ TG++ I+ + SV A G
Sbjct: 478 ADVLLTNLLKRGYNAQSLHGGKEQMDRDFIIQDFKTGNSDIL--VATSVAARG------- 528
Query: 487 MIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+++ +VI D M++YV + R +G +F T D A
Sbjct: 529 ---------LDVKRLNLVINYDSPNHMEDYVHRVGRTGRAGSTGEAVTFLTAKDYRAAYD 579
Query: 547 MIEILEQCGQVVPDALRDLCH 567
+ L+ Q+VPD ++ + +
Sbjct: 580 VSRALKVSKQLVPDNVQAVAN 600
>gi|50554139|ref|XP_504478.1| YALI0E27715p [Yarrowia lipolytica]
gi|74659776|sp|Q6C4D4.1|DBP2_YARLI RecName: Full=ATP-dependent RNA helicase DBP2
gi|49650347|emb|CAG80081.1| YALI0E27715p [Yarrowia lipolytica CLIB122]
Length = 552
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 20/319 (6%)
Query: 256 GPFLLFLVSSQEKAAKVRSVCKPL-KAFGIHTVSLHPGAAIDHQITGL-RSCEPEFLVST 313
GP +L L ++E A +++ C K+ I ++ G QI L R E +++T
Sbjct: 189 GPIVLVLAPTRELAVQIQQECSKFGKSSKIRNTCVYGGVPRGQQIRDLARGVE--IVIAT 246
Query: 314 PERLLKLVSLKAIDVSGVSLLVVDRLDSLSKGDTLSLIRQSISG-KPHTVVFNDCLTYTS 372
P RLL ++ ++ V+ LV+D D + IR+ + +P T+
Sbjct: 247 PGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 306
Query: 373 VPAVQNL---LLGSINRLSLNQSVASQSACIIQSVNVCASDE--EKILKGIQVLDHAYGD 427
VQ L L ++++ S S I Q V VC E ++++K ++ +
Sbjct: 307 --EVQRLAHDYLKDQIQVNIGSLELSASHNITQVVEVCTEYEKRDRLVKHLETV------ 358
Query: 428 HFHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVEADGRKRPAVSM 487
++ K L G ++ L+ G+ ++ V + R+ + M
Sbjct: 359 -MENKESKCLIFTGTKRVADDITKFLRQDGWPALAIHGDKQQQERDWVLNEFRQGKSPIM 417
Query: 488 IDKDHISTA-ELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFFTKDDAAHAGQ 546
+ D S +++ VI D+ + ++YV + R G +++FT+D+ A
Sbjct: 418 VATDVASRGIDVKGINFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQARD 477
Query: 547 MIEILEQCGQVVPDALRDL 565
++ IL + Q + L ++
Sbjct: 478 LLVILREAKQHIDPKLEEM 496
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,375,689,865
Number of Sequences: 23463169
Number of extensions: 328478383
Number of successful extensions: 1007441
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 4189
Number of HSP's that attempted gapping in prelim test: 1003985
Number of HSP's gapped (non-prelim): 6207
length of query: 573
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 425
effective length of database: 8,886,646,355
effective search space: 3776824700875
effective search space used: 3776824700875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)