Query 008237
Match_columns 573
No_of_seqs 277 out of 1526
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 21:25:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u6z_A Exopolyphosphatase; alp 100.0 3E-104 1E-108 869.7 55.6 498 11-557 9-510 (513)
2 3hi0_A Putative exopolyphospha 100.0 1.5E-99 5E-104 830.9 44.8 485 11-552 13-507 (508)
3 3mdq_A Exopolyphosphatase; str 100.0 5.8E-69 2E-73 555.8 37.4 303 13-332 4-311 (315)
4 3cer_A Possible exopolyphospha 100.0 9.8E-67 3.3E-71 544.3 31.9 310 6-331 9-339 (343)
5 1t6c_A Exopolyphosphatase; alp 100.0 3.2E-65 1.1E-69 527.3 34.4 296 13-331 12-311 (315)
6 3rf0_A Exopolyphosphatase; str 100.0 2.6E-39 8.9E-44 314.9 18.7 197 340-560 3-203 (209)
7 3aap_A Ectonucleoside triphosp 100.0 2.5E-29 8.6E-34 262.6 13.3 154 13-177 3-178 (353)
8 3cj1_A Ectonucleoside triphosp 99.9 2.1E-24 7.2E-29 232.0 13.8 149 13-164 34-211 (456)
9 3zx3_A Ectonucleoside triphosp 99.8 9.2E-20 3.1E-24 194.6 14.8 148 14-164 34-202 (452)
10 3h1q_A Ethanolamine utilizatio 99.7 5.2E-17 1.8E-21 163.4 16.1 153 11-183 26-179 (272)
11 2ych_A Competence protein PILM 98.2 2.3E-05 7.8E-10 81.9 16.5 71 112-183 161-231 (377)
12 4a2a_A Cell division protein F 98.2 3.8E-05 1.3E-09 81.8 17.5 39 144-182 207-245 (419)
13 4a57_A Nucleoside-triphosphata 98.2 8E-06 2.7E-10 87.2 11.5 73 88-160 158-264 (611)
14 2pq7_A Predicted HD superfamil 97.6 0.00033 1.1E-08 67.7 10.8 99 359-487 34-136 (220)
15 3tm8_A BD1817, uncharacterized 97.2 0.00099 3.4E-08 68.4 9.5 102 361-487 169-289 (328)
16 4gni_A Putative heat shock pro 97.1 0.0041 1.4E-07 65.4 13.9 76 105-182 167-249 (409)
17 3ccg_A HD superfamily hydrolas 96.8 0.0047 1.6E-07 58.1 9.7 93 361-490 22-137 (190)
18 3b57_A LIN1889 protein; Q92AN1 96.7 0.0051 1.8E-07 58.8 9.0 77 360-455 27-103 (209)
19 2o08_A BH1327 protein; putativ 96.6 0.0058 2E-07 57.3 8.9 93 361-490 21-135 (188)
20 2d0o_A DIOL dehydratase-reacti 96.6 0.0069 2.4E-07 65.2 10.2 77 103-182 370-446 (610)
21 1nbw_A Glycerol dehydratase re 96.5 0.0079 2.7E-07 64.9 10.0 76 104-182 373-448 (607)
22 1k8k_A ARP3, actin-like protei 96.5 0.015 5E-07 61.4 12.0 98 82-182 101-204 (418)
23 2ogi_A Hypothetical protein SA 96.4 0.008 2.8E-07 56.8 8.1 94 360-490 28-143 (196)
24 2qgs_A Protein Se1688; alpha-h 96.4 0.014 4.9E-07 56.3 10.0 77 360-455 27-103 (225)
25 3qfu_A 78 kDa glucose-regulate 96.4 0.039 1.3E-06 57.3 14.1 109 70-182 136-250 (394)
26 3dto_A BH2835 protein; all alp 96.3 0.01 3.5E-07 57.4 8.8 78 359-455 26-103 (223)
27 2fxu_A Alpha-actin-1, actin, a 96.2 0.031 1.1E-06 58.0 12.6 93 81-182 93-189 (375)
28 2pjq_A Uncharacterized protein 96.2 0.0097 3.3E-07 57.8 7.9 77 360-455 32-108 (231)
29 3djb_A Hydrolase, HD family; a 96.1 0.011 3.8E-07 57.1 7.5 78 359-455 26-103 (223)
30 1jce_A ROD shape-determining p 95.8 0.089 3E-06 53.6 13.3 75 103-182 111-186 (344)
31 2v7y_A Chaperone protein DNAK; 95.6 0.17 5.9E-06 54.7 15.5 108 69-182 91-205 (509)
32 2fsj_A Hypothetical protein TA 94.8 0.042 1.4E-06 56.5 6.9 62 117-181 165-232 (346)
33 2qm1_A Glucokinase; alpha-beta 94.6 0.7 2.4E-05 46.4 15.7 141 4-168 2-159 (326)
34 3gw7_A Uncharacterized protein 94.5 0.008 2.7E-07 58.7 0.7 76 361-455 28-110 (239)
35 3hc1_A Uncharacterized HDOD do 94.2 0.073 2.5E-06 53.7 7.1 95 361-490 121-245 (305)
36 4apw_A ALP12; actin-like prote 93.9 0.057 2E-06 55.1 5.6 90 88-182 105-213 (329)
37 1hux_A Activator of (R)-2-hydr 93.7 0.58 2E-05 46.2 12.4 115 14-166 4-119 (270)
38 3i33_A Heat shock-related 70 k 93.6 0.38 1.3E-05 50.0 11.4 110 70-182 141-258 (404)
39 3qb0_A Actin-related protein 4 93.3 0.38 1.3E-05 51.9 11.1 150 16-182 26-203 (498)
40 2q14_A Phosphohydrolase; BT420 93.3 0.12 4.1E-06 54.3 6.9 59 361-429 58-126 (410)
41 1zc6_A Probable N-acetylglucos 93.1 1.5 5.1E-05 43.7 14.6 130 12-166 10-145 (305)
42 3sk9_A Putative uncharacterize 93.0 0.12 4.1E-06 51.2 6.1 89 361-459 28-149 (265)
43 3js6_A Uncharacterized PARM pr 92.4 0.12 4E-06 53.5 5.2 64 117-182 156-225 (355)
44 1yuw_A Heat shock cognate 71 k 92.1 1 3.4E-05 49.2 12.6 108 69-181 121-236 (554)
45 3zyy_X Iron-sulfur cluster bin 92.0 0.57 2E-05 51.7 10.4 161 13-176 205-402 (631)
46 4b9q_A Chaperone protein DNAK; 92.0 0.89 3.1E-05 50.2 12.1 110 68-182 116-236 (605)
47 3u1n_A SAM domain and HD domai 91.9 0.31 1.1E-05 52.4 7.8 46 361-414 68-113 (528)
48 1dkg_D Molecular chaperone DNA 91.5 0.94 3.2E-05 46.6 11.1 75 106-182 153-236 (383)
49 2hek_A Hypothetical protein; p 91.4 0.35 1.2E-05 50.2 7.5 76 361-453 53-142 (371)
50 3irh_A HD domain protein; phos 91.1 0.26 8.7E-06 52.5 6.1 67 361-430 89-163 (480)
51 2zgy_A Plasmid segregation pro 91.1 0.23 8E-06 50.1 5.7 96 83-182 90-206 (320)
52 3d2f_A Heat shock protein homo 90.9 1.9 6.6E-05 48.2 13.5 111 68-182 119-241 (675)
53 2ch5_A NAGK protein; transfera 90.9 2.4 8.3E-05 42.8 13.3 140 14-176 7-152 (347)
54 1k8k_B ARP2, actin-like protei 90.4 0.16 5.4E-06 53.1 3.8 92 83-182 99-193 (394)
55 4ehu_A Activator of 2-hydroxyi 90.1 3.9 0.00013 39.8 13.6 113 14-165 2-116 (276)
56 2ews_A Pantothenate kinase; PA 89.8 8.3 0.00028 38.3 15.6 128 11-182 18-148 (287)
57 2kho_A Heat shock protein 70; 88.9 1.7 5.7E-05 48.0 10.8 108 69-181 117-235 (605)
58 2hoe_A N-acetylglucosamine kin 88.4 9.2 0.00032 39.2 15.5 134 13-167 87-236 (380)
59 4fo0_A Actin-related protein 8 88.2 4 0.00014 44.6 13.3 95 80-182 187-287 (593)
60 3i7a_A Putative metal-dependen 87.9 1.3 4.4E-05 43.8 8.2 98 361-488 120-238 (281)
61 3dwl_A Actin-related protein 3 87.6 1.8 6.2E-05 45.6 9.6 99 81-182 116-220 (427)
62 2dqb_A Deoxyguanosinetriphosph 86.9 1.6 5.5E-05 45.2 8.4 52 361-430 78-145 (376)
63 1vqr_A Hypothetical protein CJ 86.1 1.2 4.1E-05 44.3 6.9 38 361-415 127-164 (297)
64 3vgl_A Glucokinase; ROK family 84.8 6.8 0.00023 39.2 11.8 131 13-167 2-146 (321)
65 1z05_A Transcriptional regulat 84.5 17 0.00058 37.9 15.2 135 13-167 108-258 (429)
66 4e1j_A Glycerol kinase; struct 83.8 3.8 0.00013 44.2 10.0 82 7-97 20-104 (520)
67 3r8e_A Hypothetical sugar kina 83.2 8.9 0.0003 38.3 11.9 134 13-167 19-168 (321)
68 1z6r_A MLC protein; transcript 83.2 14 0.00047 38.2 13.8 135 13-167 85-236 (406)
69 3ezw_A Glycerol kinase; glycer 81.8 3.6 0.00012 44.4 8.9 78 12-98 3-83 (526)
70 2ivn_A O-sialoglycoprotein end 80.5 49 0.0017 33.1 17.7 149 15-181 3-160 (330)
71 4db3_A Glcnac kinase, N-acetyl 80.1 20 0.00067 35.9 13.2 133 14-167 25-170 (327)
72 3ljx_A MMOQ response regulator 79.5 6.5 0.00022 38.8 9.2 38 361-415 111-148 (288)
73 1saz_A Probable butyrate kinas 79.4 6 0.0002 40.8 9.2 140 14-168 3-200 (381)
74 1zbs_A Hypothetical protein PG 79.2 23 0.00078 34.7 13.1 128 15-166 2-132 (291)
75 4am6_A Actin-like protein ARP8 78.1 9.1 0.00031 42.2 10.4 95 81-182 211-311 (655)
76 3m1t_A Putative phosphohydrola 77.0 4.4 0.00015 39.8 7.0 38 361-416 108-145 (275)
77 2ap1_A Putative regulator prot 76.2 39 0.0013 33.4 14.1 133 13-167 24-170 (327)
78 2pgs_A Putative deoxyguanosine 75.9 3 0.0001 44.3 5.6 46 361-413 65-113 (451)
79 4bc3_A Xylulose kinase; transf 75.7 6.7 0.00023 42.5 8.6 77 13-96 10-98 (538)
80 3hz6_A Xylulokinase; xylulose, 75.6 5.3 0.00018 43.0 7.7 74 13-96 5-81 (511)
81 2yhw_A Bifunctional UDP-N-acet 75.3 37 0.0013 33.9 13.7 134 13-167 30-181 (343)
82 3ifr_A Carbohydrate kinase, FG 75.2 5.9 0.0002 42.5 8.0 76 13-97 7-85 (508)
83 3g25_A Glycerol kinase; IDP007 75.2 9 0.00031 41.0 9.4 74 13-95 6-82 (501)
84 3epq_A Putative fructokinase; 75.1 37 0.0013 33.5 13.4 127 13-168 3-148 (302)
85 3mem_A Putative signal transdu 74.8 10 0.00035 40.1 9.6 43 361-417 281-323 (457)
86 2e2o_A Hexokinase; acetate and 73.5 20 0.00069 35.0 10.9 114 14-154 3-118 (299)
87 2aa4_A Mannac kinase, putative 72.8 24 0.00083 34.2 11.3 130 15-167 3-145 (289)
88 3h3n_X Glycerol kinase; ATP-bi 71.7 9.9 0.00034 40.7 8.7 76 12-96 4-82 (506)
89 2p3r_A Glycerol kinase; glycer 71.6 12 0.00042 40.1 9.4 75 13-96 3-80 (510)
90 3htv_A D-allose kinase, alloki 71.5 21 0.00073 35.3 10.6 134 13-168 7-157 (310)
91 3bg2_A DGTP triphosphohydrolas 70.3 2.9 0.0001 44.2 4.0 51 361-413 67-120 (444)
92 3vov_A Glucokinase, hexokinase 69.0 75 0.0026 31.1 14.0 132 14-167 2-148 (302)
93 2zf5_O Glycerol kinase; hypert 68.3 14 0.00048 39.4 8.9 76 13-97 3-81 (497)
94 1woq_A Inorganic polyphosphate 67.5 87 0.003 29.8 15.1 138 14-167 13-165 (267)
95 3ll3_A Gluconate kinase; xylul 67.2 12 0.0004 40.1 8.1 72 13-96 4-78 (504)
96 3l0q_A Xylulose kinase; xlylul 66.5 12 0.00042 40.5 8.1 74 13-96 5-82 (554)
97 3m5f_A Metal dependent phospho 66.3 7.7 0.00026 37.4 5.6 58 398-456 55-127 (244)
98 2gup_A ROK family protein; sug 66.2 45 0.0015 32.3 11.6 124 15-167 6-142 (292)
99 3djc_A Type III pantothenate k 63.5 36 0.0012 33.1 10.1 129 15-166 4-148 (266)
100 2dpn_A Glycerol kinase; thermu 61.3 17 0.00058 38.7 7.9 74 14-96 3-79 (495)
101 3jvp_A Ribulokinase; PSI-II, N 60.6 11 0.00036 41.2 6.2 78 13-96 5-94 (572)
102 3mcp_A Glucokinase; structural 60.0 25 0.00087 35.9 8.7 136 13-167 9-171 (366)
103 2d4w_A Glycerol kinase; alpha 59.2 30 0.001 36.8 9.5 76 14-98 3-81 (504)
104 1zxo_A Conserved hypothetical 58.8 20 0.00069 35.1 7.4 125 15-166 2-130 (291)
105 3kq5_A Hypothetical cytosolic 58.1 7.4 0.00025 40.1 4.0 41 361-415 78-119 (393)
106 2ibn_A Inositol oxygenase; red 57.1 3.9 0.00013 39.3 1.6 25 400-424 79-103 (250)
107 3aql_A Poly(A) polymerase; tra 53.5 10 0.00035 39.6 4.4 54 400-453 287-351 (415)
108 2w40_A Glycerol kinase, putati 53.3 20 0.00067 38.3 6.7 77 13-96 4-83 (503)
109 3h6e_A Carbohydrate kinase, FG 52.9 19 0.00064 38.4 6.4 24 13-38 6-29 (482)
110 3o8m_A Hexokinase; rnaseh-like 52.9 99 0.0034 32.8 11.9 60 14-78 81-140 (485)
111 1vhx_A Putative holliday junct 51.4 13 0.00044 33.1 4.1 86 14-122 4-97 (150)
112 4htl_A Beta-glucoside kinase; 48.0 2E+02 0.0068 27.8 13.1 127 14-167 5-147 (297)
113 2h3g_X Biosynthetic protein; p 47.2 96 0.0033 30.1 10.1 136 14-172 1-152 (268)
114 2e5n_A RNA polymerase II elong 46.3 27 0.00091 28.8 4.8 53 394-449 41-95 (100)
115 3i8b_A Xylulose kinase; strain 46.2 46 0.0016 35.6 8.2 26 12-38 4-29 (515)
116 1iv0_A Hypothetical protein; r 46.1 1.2E+02 0.004 24.6 9.2 84 15-123 3-93 (98)
117 2cqz_A 177AA long hypothetical 46.1 22 0.00074 32.4 4.9 42 361-415 35-76 (177)
118 3mdq_A Exopolyphosphatase; str 42.7 63 0.0021 32.1 8.1 59 13-74 131-190 (315)
119 1nu0_A Hypothetical protein YQ 42.0 1E+02 0.0035 26.7 8.3 86 14-123 4-96 (138)
120 2doa_A RNA polymerase II elong 40.7 24 0.00082 29.3 3.7 54 394-450 40-95 (104)
121 1miw_A TRNA CCA-adding enzyme; 34.2 29 0.001 36.0 4.1 43 400-454 248-290 (404)
122 3djc_A Type III pantothenate k 33.7 45 0.0015 32.5 5.2 29 145-173 4-32 (266)
123 1t6c_A Exopolyphosphatase; alp 32.9 56 0.0019 32.5 5.9 58 12-74 137-197 (315)
124 3cet_A Conserved archaeal prot 32.5 35 0.0012 34.4 4.2 25 143-167 127-151 (334)
125 2uyt_A Rhamnulokinase; rhamnos 32.2 30 0.001 36.6 4.0 23 11-33 2-24 (489)
126 1taz_A Calcium/calmodulin-depe 30.6 55 0.0019 33.5 5.4 42 361-413 85-126 (365)
127 1u6z_A Exopolyphosphatase; alp 30.1 53 0.0018 35.2 5.4 57 14-73 138-195 (513)
128 1nbw_A Glycerol dehydratase re 29.3 60 0.0021 35.2 5.5 56 13-77 2-58 (607)
129 1bdg_A Hexokinase; phosphotran 28.6 1.2E+02 0.004 31.9 7.7 61 13-78 68-129 (451)
130 1vfg_A A-adding enzyme, poly A 28.0 55 0.0019 33.6 5.0 43 399-453 256-298 (390)
131 2paq_A 5'-deoxynucleotidase YF 26.6 65 0.0022 29.8 4.8 46 361-419 34-80 (201)
132 1sz2_A Glucokinase, glucose ki 26.0 2.7E+02 0.0092 27.3 9.7 120 11-153 12-149 (332)
133 2itm_A Xylulose kinase, xylulo 25.9 1.4E+02 0.0049 31.2 7.9 70 15-95 2-74 (484)
134 4dzo_A Mitotic spindle assembl 25.0 56 0.0019 27.9 3.6 43 104-152 32-74 (123)
135 2w6k_A COBE; biosynthetic prot 24.9 1.2E+02 0.0043 26.4 6.0 58 61-127 23-80 (145)
136 2r8q_A Class I phosphodiestera 23.9 89 0.0031 31.8 5.5 42 361-413 103-144 (359)
137 3cer_A Possible exopolyphospha 23.8 1E+02 0.0034 31.1 5.9 62 13-74 146-211 (343)
138 3sk3_A Acetate kinase, acetoki 23.8 52 0.0018 34.2 3.8 31 3-33 9-39 (415)
139 1f0j_A PDE4B, phosphodiesteras 23.4 1.9E+02 0.0066 29.5 8.0 42 361-413 86-127 (377)
140 3eeq_A Putative cobalamin bios 22.2 1.3E+02 0.0043 30.3 6.2 57 59-129 219-275 (336)
141 3ce9_A Glycerol dehydrogenase; 22.1 19 0.00065 36.5 0.0 73 78-155 28-100 (354)
142 1zkl_A HCP1, TM22, high-affini 21.3 84 0.0029 31.9 4.7 42 361-413 86-127 (353)
143 2jvf_A De novo protein M7; tet 20.1 2.6E+02 0.009 21.2 6.0 55 496-562 10-64 (96)
No 1
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=100.00 E-value=3.1e-104 Score=869.71 Aligned_cols=498 Identities=24% Similarity=0.376 Sum_probs=446.9
Q ss_pred CCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008237 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (573)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (573)
+++++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|+
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~--~v~ 85 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPA--SVC 85 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEE-TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGG--GEE
T ss_pred cCCeEEEEEeccccEEEEEEEEc-CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--EEE
Confidence 45679999999999999999997 578999999999999999999999999999999999999999999999995 799
Q ss_pred EEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEE
Q 008237 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (573)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (573)
+|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+ +++++||||||||+++++++++..+.|
T Consensus 86 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~-~~lviDIGGGStEl~~~~~~~~~~~~S 164 (513)
T 1u6z_A 86 IVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKG-RKLVIDIGGGSTELVIGENFEPILVES 164 (513)
T ss_dssp EEECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCS-CEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred EEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCC-CEEEEEECCCcEEEEEEeCCeeeEEEE
Confidence 9999999999999999999999999999999999999999999999987533 689999999999999999999999999
Q ss_pred EehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCcEEEeehHHHHHHHHHHHc-CCCCccccCCCC
Q 008237 171 VNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS-GYDRDFVDNVGD 248 (573)
Q Consensus 171 lplG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~~-~y~~~~~~~~~~ 248 (573)
+|+|||+++++|+.++ ++..++.++++|+++.+.... ..++..++..+||+|||+++++++... .|+.
T Consensus 165 l~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~~~~~~lvg~gGt~~~la~i~~~~~~~~-------- 234 (513)
T 1u6z_A 165 RRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLT--WQFRIQGWNVAMGASGTIKAAHEVLMEMGEKD-------- 234 (513)
T ss_dssp ESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHHHHTTTH--HHHHHHCCSEEEEESHHHHHHHHHHHHTTCSS--------
T ss_pred EeccHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHH--HHhhhcCCCEEEEEChHHHHHHHHHHhCCCCC--------
Confidence 9999999999998764 688888899999999997643 233444666799999999999998643 4542
Q ss_pred CCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 008237 249 FGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (573)
Q Consensus 249 ~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~~ 328 (573)
+ .++.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||+++++
T Consensus 235 ------~-~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 305 (513)
T 1u6z_A 235 ------G-IITPERLEKLVKEVLRHRNF--ASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEM 305 (513)
T ss_dssp ------S-CBCHHHHHHHHHHHTTCSBG--GGCCCTTCCTTGGGTHHHHHHHHHHHHHHHTCSCBEECSCCHHHHHHHHH
T ss_pred ------C-eecHHHHHHHHHHHHCCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECCCcHHHHHHHHH
Confidence 1 59999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCccchhHHHHHHHHHHhCccccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHH
Q 008237 329 LAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLL 408 (573)
Q Consensus 329 l~~~~~~~~~~~~~~~~s~~~l~~ry~~~~~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~L 408 (573)
+.+.. ..|++.+|+.+++.||++|. .|+++|+++|++|||+|++.|++.. ++++++||+|||+|
T Consensus 306 ~~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~~l~~~~~l~~---------~~~~~~lL~~Aa~L 369 (513)
T 1u6z_A 306 EGRFR-----HQDVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKLA---------HPQLEALLRWAAML 369 (513)
T ss_dssp HHHHT-----TCCHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGGC---------CHHHHHHHHHHHHH
T ss_pred HHhcc-----cccHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhhCcCC---------ChhHHHHHHHHHHH
Confidence 87632 23788999999999999987 8999999999999999999987421 23557999999999
Q ss_pred hhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhccc
Q 008237 409 HNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQN 488 (573)
Q Consensus 409 hdiG~~i~~~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~s 488 (573)
||||++||+++||+||+|||.|++ ++||||+||.+||++++||+++.|+..++.+..++++.+++|++|||||++||++
T Consensus 370 hdiG~~I~~~~~~~Hs~yii~n~~-l~G~s~~e~~~lA~l~~~h~~~~~~~~~~~~~~l~~~~v~~L~~iLRlA~~Ld~~ 448 (513)
T 1u6z_A 370 HEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQ 448 (513)
T ss_dssp TTTTTTTCSTTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCCHHHHHHHHHHHHHHHHTTTT
T ss_pred HHccCcCCccccchhHHHHHhcCC-CCCCCHHHHHHHHHHHHHhCCCCCcchhhhhhccCHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999998 9999999999999999999999998765666778777789999999999999999
Q ss_pred cCCC-Ccc-eEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEeecCCC
Q 008237 489 DCVN-LRG-VDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSS 557 (573)
Q Consensus 489 ~~~~-i~~-i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~ 557 (573)
|.+. +++ ++++.+++.++|.++.. |..+++ +| .|.+++++++|+++||.++.+...+++.
T Consensus 449 ~~~~~i~~~~~~~~~~~~l~l~~~~~------~~~~~~-Le--~~~l~~~~~~~~~~~g~~l~l~~~~~~~ 510 (513)
T 1u6z_A 449 RQATTTPPTLTLITDDSHWTLRFPHD------WFSQNA-LV--LLDLEKEQEYWEGVAGWRLKIEEESTPE 510 (513)
T ss_dssp GGGCCCCSCCEEEEETTEEEEEECTT------GGGGCH-HH--HHHHHHHHHHHTTSTTCEEEEEECCCC-
T ss_pred cCCCCCCCeeEEEEECCEEEEEEcCc------ccccCc-HH--HHHHHHHHHHHHHHhCCeEEEEECCCcc
Confidence 9888 899 99998888888887544 444555 34 5999999999999999999999877764
No 2
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.5e-99 Score=830.89 Aligned_cols=485 Identities=20% Similarity=0.245 Sum_probs=422.7
Q ss_pred CCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008237 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (573)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (573)
..+++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|+
T Consensus 13 ~~~~~AaIDiGSNS~rL~I~~~~-~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~~~~~v~--~v~ 89 (508)
T 3hi0_A 13 GLAPVSVIDIGSNSVRLVVYEGL-SRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLSEQAQAQ--KLY 89 (508)
T ss_dssp TCCCEEEEEECSSEEEEEEESCS-SSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEE
T ss_pred cCCeEEEEEECCccEEEEEEEEc-CCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--eEE
Confidence 34689999999999999999986 567899999999999999999999999999999999999999999999995 799
Q ss_pred EEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEE
Q 008237 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (573)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (573)
+|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+++++||||||||+++++++++..++|
T Consensus 90 ~vATsA~R~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~~~~~~~~~S 167 (508)
T 3hi0_A 90 VLATAAAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIKDKSCGEGIT 167 (508)
T ss_dssp EEECTHHHHSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEETTEECCCEE
T ss_pred EEeeHHHHcCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEeeCCeeeeEEE
Confidence 99999999999999999999999999999999999999999999998874 3479999999999999999999999999
Q ss_pred EehhHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHhcchhHHHHhcCCcEEEeehHHHHHHHHHHH--cCCCCccccCCCC
Q 008237 171 VNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV--SGYDRDFVDNVGD 248 (573)
Q Consensus 171 lplG~vrl~e~f~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~--~~y~~~~~~~~~~ 248 (573)
+|+||||+++.+.. ++..+++|+++.+..+ .++++..++..+||+|||+++++++.. ..||...+|
T Consensus 168 l~lG~vrl~e~~~~------~~~~~~~~i~~~l~~~--~~~~~~~~~~~~ig~gGt~~~la~i~~~~~~y~~~~~~---- 235 (508)
T 3hi0_A 168 LPLGGLRLSEQSDG------SLEKAATIARKHVKSF--AKLLAAGEGRTFYAVGGTWRNIAKLHMEISGYPLHMMQ---- 235 (508)
T ss_dssp ESCCHHHHHHHTTT------CHHHHHHHHHHHHHTT--HHHHHTTTTSEEEEESHHHHHHHHHHHHHHTCSCCCCT----
T ss_pred ecceEEehhhcChh------HHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEehHHHHHHHHHhhccCCCccccc----
Confidence 99999999998432 4677899999999862 233444556789999999999999753 468765544
Q ss_pred CCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 008237 249 FGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (573)
Q Consensus 249 ~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~~ 328 (573)
+|.|+.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||+++++
T Consensus 236 ------~~~i~~~~l~~~~~~l~~~~~~--~~~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~i~vs~~glREGll~~~ 307 (508)
T 3hi0_A 236 ------GYELPLEEMLNFLEEVIVSRDS--KDPAWQAVSKNRRSLLPFGAIAMREVLRAMKPAKIAFSAQGVREGYLYSL 307 (508)
T ss_dssp ------TCEEEHHHHHHHHHHHHTCCC------CCHHHHHCTTCSHHHHHHHHHHHHHHHCCSEEEECSCCHHHHHHHTT
T ss_pred ------CcEEcHHHHHHHHHHHHcCCHH--HHHhccCCCHhHHHHHHHHHHHHHHHHHHcCcCEEEECCCcHHHHHHHHH
Confidence 6799999999999999999998 89999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCccchhHHHHHHHHHHhCccccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHH
Q 008237 329 LAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLL 408 (573)
Q Consensus 329 l~~~~~~~~~~~~~~~~s~~~l~~ry~~~~~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~L 408 (573)
+.+... ..|++.+|+.+++.||++|. .|+++|+++|+.||||++ ++ +++++++||+|||+|
T Consensus 308 l~~~~~----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~ql~-~~------------~~~~~~~lL~~Aa~L 368 (508)
T 3hi0_A 308 LTEAER----ESDPLLVAADELAILRARSP--EHARELADWSGRTFPVFG-ID------------ETEEESRYRQAACLL 368 (508)
T ss_dssp SCHHHH----HSCHHHHHHHHHHHHHCSCH--HHHHHHHHHHHHHGGGGT-CC------------CCHHHHHHHHHHHHH
T ss_pred hhhhcc----ccCHHHHHHHHHHHHhCcCH--HHHHHHHHHHHHHHHhhc-cC------------CChHHHHHHHHHHHH
Confidence 875321 23778999999999999987 899999999999999997 43 234678999999999
Q ss_pred hhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCC-CCCCCcc-cccCCCH---HHHHHHHHHHHHHH
Q 008237 409 HNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKK-FPRSHHA-FLEEFPE---QKFRVLCAIVRLSV 483 (573)
Q Consensus 409 hdiG~~i~~~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~-~~~~~~~-~~~~l~~---~~~~~L~~iLRlA~ 483 (573)
|||||+||+++||+||+|||.|++ ++||||+||.++|.+++||++. .++...+ ....+++ ..+.+|+++||||+
T Consensus 369 hdiG~~i~~~~~~~Hs~yii~n~~-l~Gfs~~e~~~lA~~~~~r~~~~~~~~~~~~~~~ll~~~~~~~~~~L~~iLRlA~ 447 (508)
T 3hi0_A 369 ADISWRAHPDYRGLQALNIIAHSS-FVAITHPGRAYIALANYYRFEGLNDNGTTEPLAAMAGERLQELGKLLGGLLRVVY 447 (508)
T ss_dssp TTTTTTSCGGGHHHHHHHHHHHBC-CCSCCHHHHHHHHHHHHHHHHCSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHhCCCchHHHHHHHHHcCC-CCCCCHHHHHHHHHHHHHhcCCCCccchhhHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 9999999999999877655443 3333222 2333444 56778999999999
Q ss_pred HhccccCCCCcceEEEEeCc---eeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEe
Q 008237 484 ILQQNDCVNLRGVDFFHSYE---GFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVG 552 (573)
Q Consensus 484 ~Ld~s~~~~i~~i~~~~~~~---~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~ 552 (573)
+||+++.+.+++++++.+++ .++|.++.. .+.++ .|.+++..++|+++||+++.|++
T Consensus 448 ~L~~~~~~~i~~~~~~~~~~~~~~l~l~~~~~----------~~~l~--~~~~~~~~~~~~~~~g~~~~~~~ 507 (508)
T 3hi0_A 448 LFSASMPGVVDHLKFRKSDNPDIDLEFVVPHD----------YCDFA--GERLDGRLQQLAKLTGKRLAFVF 507 (508)
T ss_dssp HHHTTCSSSGGGCEEEECSSTTCSEEEEECGG----------GGGGC--CHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HhcCCCcCCCCceEEEECCCCceEEEEEECCC----------cHHHH--HHHHHHHHHHHHHHHCCCeEEEe
Confidence 99999999999999998888 899988644 12223 48999999999999999999986
No 3
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=100.00 E-value=5.8e-69 Score=555.81 Aligned_cols=303 Identities=26% Similarity=0.462 Sum_probs=280.3
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
+++|+|||||||+||+|+++.+ +.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+|+ ++++|
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~-~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~v~~v 80 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVN-DRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVV--HVIAT 80 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEET-TEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCC--EEEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcC-CceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCC--EEEEE
Confidence 3689999999999999999985 78999999999999999999999999999999999999999999999995 79999
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEe
Q 008237 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (573)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (573)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+++++++||||||||+++++++++..++|+|
T Consensus 81 ATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl~ 160 (315)
T 3mdq_A 81 GTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWKQSFE 160 (315)
T ss_dssp ECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEEEEES
T ss_pred eeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeeeEEEe
Confidence 99999999999999999999999999999999999999999999988655679999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCcEEEeehHHHHHHHHHHH----cCCCCccccCCC
Q 008237 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV----SGYDRDFVDNVG 247 (573)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~----~~y~~~~~~~~~ 247 (573)
+|+|||+++|+..+ ++..+++.+++|+++.+... ..+++..++..+||+|||+|+++++.. ..|++..+|
T Consensus 161 lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~lig~gGt~~~la~~~~~~~~~~y~~~~~~--- 235 (315)
T 3mdq_A 161 IGGQRLIDRFHVHDPMREDDRVMMHNYFDEVLVPL--EKAINTWRPTQLIGCSGTFDTLAEMNIQHHREKIALEKQT--- 235 (315)
T ss_dssp CCHHHHHHHSCCCSSCCHHHHHHHHHHHHHHTHHH--HHHHHHHCCCEEEEESHHHHHHHHHHHHHHTCCCCGGGCS---
T ss_pred chhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEchHHHHHHHHHHhcccCCCCccccc---
Confidence 99999999998765 68888999999999999864 234455567789999999999999763 467765554
Q ss_pred CCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHH
Q 008237 248 DFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVAD 327 (573)
Q Consensus 248 ~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~ 327 (573)
++.++.+++.+++++|..++.+ +|.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||++++
T Consensus 236 -------~~~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreG~l~~ 306 (315)
T 3mdq_A 236 -------SYLLSLPDFNRLRKQLVASTRR--ERLAIAGMIELRADMVVVAICLIEHVLKLVSTNAITVSTYSLKEGVLYT 306 (315)
T ss_dssp -------EEEEEHHHHHHHHHHHHHCCHH--HHHTSTTCCHHHHHHHHHHHHHHHHHHHHSCCSEEEEESCCHHHHHHHH
T ss_pred -------CcEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCccHHHHHHHH
Confidence 6899999999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHhcc
Q 008237 328 SLAKV 332 (573)
Q Consensus 328 ~l~~~ 332 (573)
++.+.
T Consensus 307 ~~~~~ 311 (315)
T 3mdq_A 307 MLDGV 311 (315)
T ss_dssp HHHTC
T ss_pred Hhhhh
Confidence 98764
No 4
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=100.00 E-value=9.8e-67 Score=544.31 Aligned_cols=310 Identities=27% Similarity=0.371 Sum_probs=275.3
Q ss_pred ccccCCCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Q 008237 6 SYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNIS 85 (573)
Q Consensus 6 ~~~~~~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~ 85 (573)
+-|....+++|+|||||||+||+|+++.+++.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+|+
T Consensus 9 ~~~~~~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~~~~~v~ 88 (343)
T 3cer_A 9 SHMSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPID 88 (343)
T ss_dssp -----CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccCCCCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 33445567899999999999999999986677999999999999999999999999999999999999999999999996
Q ss_pred cccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceEEEEeeC-
Q 008237 86 RDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGKR- 162 (573)
Q Consensus 86 ~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~--~~~~~lviDIGGGStEl~~~~~- 162 (573)
+|++|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+++++++||||||||++++++
T Consensus 89 --~v~~vATsA~R~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~ 166 (343)
T 3cer_A 89 --GLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDG 166 (343)
T ss_dssp --EEEEEECHHHHHCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCS
T ss_pred --eEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecC
Confidence 79999999999999999999999999999999999999999999999998875 4456999999999999999988
Q ss_pred -----CeEEEEEEEehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCcEEEeehHHHHHHHHHHHc
Q 008237 163 -----GKVVFCESVNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS 236 (573)
Q Consensus 163 -----~~~~~~~SlplG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~~ 236 (573)
+++..+.|+|+|++++++.|...+ ++..+++.+++|+++.+..... .++..++..+||+|||+|+++++...
T Consensus 167 ~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~lvg~gGt~~~la~l~~~ 244 (343)
T 3cer_A 167 VSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAFR--TVDAGKARTIIGVSGTVTTMTALAMG 244 (343)
T ss_dssp SSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHHT--TSCGGGCSEEEEESHHHHHHHHHHTT
T ss_pred ccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH--hhhhcCCcEEEEEchHHHHHHHHHhh
Confidence 555699999999999999998764 6788899999999999976421 12222345799999999999998643
Q ss_pred --CCCCccccCCCCCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHh------
Q 008237 237 --GYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELL------ 308 (573)
Q Consensus 237 --~y~~~~~~~~~~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~------ 308 (573)
.|+.+.+| +|.++.+++.+++++|..++.+ +|.+++||+++|+|+|+||++|+.++|+.+
T Consensus 245 ~~~y~~~~vh----------g~~l~~~~l~~~~~~l~~~~~~--er~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~~~ 312 (343)
T 3cer_A 245 LKEYDHTVVD----------GHRLSFEDAYAVDDKFLRMTRA--ERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAKA 312 (343)
T ss_dssp CSSCCHHHHT----------TCEEEHHHHHHHHHHHHSSCHH--HHHTCTTSCTTTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccccC----------CeEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 46654444 6789999999999999999988 999999999999999999999999999999
Q ss_pred ----CCCeEEECCcchHHHHHHHHHhc
Q 008237 309 ----GIEEMEVSGYGLGEGVVADSLAK 331 (573)
Q Consensus 309 ----~~~~i~vs~~gLReGll~~~l~~ 331 (573)
++++|+||+.|||||++++++.+
T Consensus 313 ~~~~~~~~i~vs~~glreGll~~~~~~ 339 (343)
T 3cer_A 313 DHGEAIDSFVASEHGLLDGIVLDYGRR 339 (343)
T ss_dssp HHSCCCCEEEEESCSHHHHHHHHHHHH
T ss_pred cccCCCCEEEECCCcHHHHHHHHHHHH
Confidence 99999999999999999998854
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=100.00 E-value=3.2e-65 Score=527.26 Aligned_cols=296 Identities=31% Similarity=0.425 Sum_probs=271.9
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
.++|+|||||||+||+|+++. ++.++++++.+++||||++++.+|.|++++|+|++++|++|+++|++|+++ ++++|
T Consensus 12 m~~a~IDiGSns~rl~I~~~~-~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~i~~v 88 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIK-DGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVE--RVKAV 88 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEEE
T ss_pred cEEEEEEECcCcEEEEEEEEc-CCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCC--eEEEE
Confidence 479999999999999999997 678999999999999999999999999999999999999999999999995 79999
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEe
Q 008237 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (573)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (573)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++ ..++++++||||||||+++++++++..+.|+|
T Consensus 89 ATsA~R~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~~~~~~~~~Sl~ 167 (315)
T 1t6c_A 89 ATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGKGYKVREVISLP 167 (315)
T ss_dssp ECHHHHTSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EcHHHHcCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEeCCceeeEEEEe
Confidence 99999999999999999999999999999999999999999999887 44569999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCcEEEeehHHHHHHHHHHHc--CCCCccccCCCCC
Q 008237 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS--GYDRDFVDNVGDF 249 (573)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~~~la~~~~~--~y~~~~~~~~~~~ 249 (573)
+|+++++++|...+ +++.+++.+++|+++.+.+. . +.. ..+||+|||+|+++++... .|+...+|
T Consensus 168 ~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~~l~~~--~---~~~--~~lig~gGt~~~la~~~~~~~~y~~~~v~----- 235 (315)
T 1t6c_A 168 IGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKV--K---KPV--DTIVGLGGTITTLAALEYNVYPYDPQKVH----- 235 (315)
T ss_dssp CCHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHTTT--C---CCC--SEEEEESHHHHHHHHHHTTCCSCCHHHHT-----
T ss_pred ccHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--H---hhc--CEEEEECcHHHHHHHHHhhccCCCccccC-----
Confidence 99999999998754 68888999999999999653 1 111 4689999999999998643 56654444
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCcHHHH-HhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 008237 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVER-VRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (573)
Q Consensus 250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er-~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~~ 328 (573)
+|.++.+++++++++|..++.+ +| .+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||+++++
T Consensus 236 -----g~~l~~~~l~~~~~~l~~~~~~--er~~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 308 (315)
T 1t6c_A 236 -----GKVLTYGQIKKWFDTFKEIPSE--ERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKDCLIVSDWGLREGVLVSE 308 (315)
T ss_dssp -----TCEEEHHHHHHHHHHHTTSCHH--HHHHHSTTSCGGGTTTHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHH
T ss_pred -----CeEEcHHHHHHHHHHHHcCCHH--HHHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCCchHHHHHHHH
Confidence 6789999999999999999988 99 999999999999999999999999999999999999999999999998
Q ss_pred Hhc
Q 008237 329 LAK 331 (573)
Q Consensus 329 l~~ 331 (573)
+.+
T Consensus 309 ~~~ 311 (315)
T 1t6c_A 309 VLK 311 (315)
T ss_dssp HHH
T ss_pred Hhh
Confidence 753
No 6
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=100.00 E-value=2.6e-39 Score=314.89 Aligned_cols=197 Identities=18% Similarity=0.301 Sum_probs=168.2
Q ss_pred cchhHHHHHHHHHHhCccccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchH--HHHHHHHHHhhcccccCC
Q 008237 340 ANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDL--EYLEAACLLHNIGHFTSK 417 (573)
Q Consensus 340 ~~~~~~s~~~l~~ry~~~~~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r--~lL~~Aa~LhdiG~~i~~ 417 (573)
.|+|.+|+.+++.||++|. .|+++|+++|.+|||++++.|+++ ++++ +||+|||+|||||++||+
T Consensus 3 ~Dir~~sv~~l~~ry~vd~--~ha~~V~~~A~~Lf~~l~~~~~l~-----------~~~~~~~lL~~Aa~LHdIG~~I~~ 69 (209)
T 3rf0_A 3 QDIRQRTAKSLADHYNIDR--EQARRVLETTEQLYTQWLAQNTKL-----------VQPQLEALLKWAAMLHEVGLSINH 69 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHCGGG-----------CCHHHHHHHHHHHHHTTGGGGTCS
T ss_pred CCHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHhCCC-----------hhHHHHHHHHHHHHHHHcccccCc
Confidence 3899999999999999987 899999999999999999998753 3567 999999999999999999
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhccccCCCC-c-c
Q 008237 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQNDCVNL-R-G 495 (573)
Q Consensus 418 ~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~s~~~~i-~-~ 495 (573)
++||+||+|||.|++ ++||||+||.+||.+++|||++.|+...+.+...+.+.+.+|+++||||++||+++.+.+ + +
T Consensus 70 ~~~hkHs~Yii~n~~-l~Gfs~~e~~~lA~lv~~hr~~~~~~~~~~l~~~~~~~~~~L~~iLRLA~~L~~~r~~~~l~~~ 148 (209)
T 3rf0_A 70 SGMHRHSAYILQNTN-LPGFNQEQQTLLATLVRMHRKAIKLDELPRLNLFKKKYYLPLIQLLRLSTLLNNQRQSTTTPES 148 (209)
T ss_dssp TTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCGGGCCCCSSCCHHHHHHHHHHHHHHHHHTTTGGGCCCCSC
T ss_pred ccchHHHHHHHhCCC-CCCCCHHHHHHHHHHHHHhcCCCChhhhhhcCHHHHHHHHHHHHHHHHHHHHhccccCCCCCCc
Confidence 999999999999998 999999999999999999999887654333333344788999999999999999999874 7 8
Q ss_pred eEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEeecCCCccc
Q 008237 496 VDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSSNDR 560 (573)
Q Consensus 496 i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~~~~ 560 (573)
++++.+++.++|.++.. |.+.+|+ ..+.++++.++|+++||.++.|.. .++++-+
T Consensus 149 ~~l~~~~~~l~L~~~~~------wl~~~pL---~~~~l~~e~~~~~~~~g~~l~i~~-~~~~~~~ 203 (209)
T 3rf0_A 149 LRLITDDSHWTLRFPHG------YLTQNSL---VQLDFEREQAYWDDVVGWKLVIEE-EEPDEAA 203 (209)
T ss_dssp CEEEEETTEEEEEECTT------HHHHCHH---HHHHHHHHHHHHTTSTTCEEEEEE-CCCC---
T ss_pred eEEEEcCCEEEEEeCcc------ccccCHH---HHHHHHHHHHHHHHHhCeeeEEEe-cCcchhh
Confidence 99998999999998544 3344554 258999999999999999999974 4455443
No 7
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=99.96 E-value=2.5e-29 Score=262.65 Aligned_cols=154 Identities=18% Similarity=0.150 Sum_probs=129.8
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEe-----eeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDT-----LKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD 87 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~-----~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~ 87 (573)
+++||||+||||+||.|+++.+++.++++++ .+..+||+.+... +++++++++ +|++ ++.++++
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~-----~~~~~~~l~---~f~~-~~~~~~~-- 71 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPN-----SVTIDAYLT---MLLA-DAPIHNI-- 71 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCS-----HHHHHHHHH---HHHT-TCSCCSE--
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCC-----HHHHHHHHH---HHHH-HHhcCCC--
Confidence 4689999999999999999986555777777 5666777777653 899998876 8888 8888875
Q ss_pred cEEEEEehhhhhcCC--hHHHHHHHHHHc-------CCcEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCCCc
Q 008237 88 HTRAVATAAVRAAEN--KDEFVECVREKV-------GFEVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGGGS 154 (573)
Q Consensus 88 ~i~~vATsA~R~A~N--~~~fl~~i~~~t-------G~~i~VIsg~eEA~l~~~gv~~~~~~----~~~~~lviDIGGGS 154 (573)
.|+++||+|+|+|+| +++|+++|+++| |+.|+||||+|||+|+|+||...++. .++..+++||||||
T Consensus 72 ~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGS 151 (353)
T 3aap_A 72 PVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGAS 151 (353)
T ss_dssp EEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSE
T ss_pred cEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCc
Confidence 699999999999999 999999999999 99999999999999999999877642 22358999999999
Q ss_pred eEEEEeeC--CeEEEE--EEEehhHHH
Q 008237 155 TEFVIGKR--GKVVFC--ESVNLGHVS 177 (573)
Q Consensus 155 tEl~~~~~--~~~~~~--~SlplG~vr 177 (573)
|||+++.+ +++... .|+|+|++.
T Consensus 152 tei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 152 VQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp EEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred eEEEEecCCccccCCCceEEEEECCcc
Confidence 99999854 345543 899999854
No 8
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=99.91 E-value=2.1e-24 Score=231.97 Aligned_cols=149 Identities=18% Similarity=0.187 Sum_probs=121.9
Q ss_pred CeEEEEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCcc
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~-~~~~i~~~k~~vrL-g~~~~~~g~ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (573)
++.+|||+||||+||.|++...+. ....+.+....+++ +.|+...+ ..++++.+.+.+|.+|+... +.++++
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~~~~~~~~Gls~~~-~~pe~~~~~l~~Ll~~a~~~iP~~~~~~t-- 110 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYA-NDPSKAGQSLVRCLEQALRDVPRDRHAST-- 110 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEEEEECSSSCGGGGT-TSTHHHHHHTHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeeeeeeeccccccccc-CCHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 456799999999999999997431 22222334445677 88887766 67999999999999998753 888886
Q ss_pred cEEEEEehhhhhcC-----ChHHHHHHHHHHcC------CcEEEeChHHHHHHHHhhhhccCCCC-------------CC
Q 008237 88 HTRAVATAAVRAAE-----NKDEFVECVREKVG------FEVDVLTGEQEAKFVYMGVLQFLPVF-------------DR 143 (573)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~fl~~i~~~tG------~~i~VIsg~eEA~l~~~gv~~~~~~~-------------~~ 143 (573)
.|+++||+|||+|+ |+++|+++|++.+| ..|+||||+|||+|+|+||...+... .+
T Consensus 111 ~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~ 190 (456)
T 3cj1_A 111 PLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKG 190 (456)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCC
T ss_pred eEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCC
Confidence 59999999999998 79999999999995 68999999999999999998766421 34
Q ss_pred ceEEEEeCCCceEEEEeeCCe
Q 008237 144 LVLSVDIGGGSTEFVIGKRGK 164 (573)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~ 164 (573)
..+++|||||||||++..+++
T Consensus 191 t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 191 TLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCEEEEECSSEEEEEEECCSC
T ss_pred ceEEEEcCCCceEEEeccCCc
Confidence 579999999999999987664
No 9
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=99.81 E-value=9.2e-20 Score=194.57 Aligned_cols=148 Identities=18% Similarity=0.222 Sum_probs=117.9
Q ss_pred eEE-EEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCcc
Q 008237 14 LFA-SIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (573)
Q Consensus 14 ~~A-vIDIGSNsirL~I~e~~~~~-~~~~i~~~k~~vrL-g~~~~~~g~ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (573)
.|| |||+|||++|+.||+...+. ....+.+.....++ |.|+...+. .++++.+.++.|.+|+... +.++++
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~~~~k~~gpGlSs~~~-~p~~~~~~l~~Ll~~a~~~vp~~~~~~t-- 110 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQLEECQVKGPGISKYAQ-KTDEIAAYLAECMKMSTERIPASKQHQT-- 110 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEEEEEECSSSCGGGGTT-CGGGHHHHHHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCccccceeeeecccCCChhccCC-CHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 465 89999999999999997421 12222233455677 788887777 8899999999999998864 777886
Q ss_pred cEEEEEehhhhhcC-----ChHHHHHHHHHHc---CC---cEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCC
Q 008237 88 HTRAVATAAVRAAE-----NKDEFVECVREKV---GF---EVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGG 152 (573)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~fl~~i~~~t---G~---~i~VIsg~eEA~l~~~gv~~~~~~----~~~~~lviDIGG 152 (573)
.|.++||++||.++ |+++|+++|++.+ |+ .|+||||+|||.|+|+||...+.. ..+...++||||
T Consensus 111 pi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGG 190 (452)
T 3zx3_A 111 PVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGG 190 (452)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECS
T ss_pred cEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCC
Confidence 58999999999998 5799999999998 44 899999999999999999755432 123478999999
Q ss_pred CceEEEEeeCCe
Q 008237 153 GSTEFVIGKRGK 164 (573)
Q Consensus 153 GStEl~~~~~~~ 164 (573)
|||||++..++.
T Consensus 191 gStQi~f~~~~~ 202 (452)
T 3zx3_A 191 ASTQITFVPLNS 202 (452)
T ss_dssp SEEEEEECCSSC
T ss_pred CceEEEeccCCC
Confidence 999999876543
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.72 E-value=5.2e-17 Score=163.44 Aligned_cols=153 Identities=18% Similarity=0.226 Sum_probs=117.0
Q ss_pred CCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccE
Q 008237 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHT 89 (573)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i 89 (573)
+++++++|||||||+|++|++ .++ +++.....+.+ ....|.+.+ .+++.++|+.|.+.+..+ +.+ ..
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~--~~~--~~l~~~~~~~~----~l~~g~i~d--~~~~~~~l~~~~~~~~~~~~~~--~~ 93 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTD--QEG--IPVAGALKWAS----VVKDGLVVD--YIGAIQIVRELKAKVERLLGSE--LF 93 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEEC--TTC--CEEEEEEEECC----CCBTTBCTT--HHHHHHHHHHHHHHHHHHSSSC--CC
T ss_pred CCCEEEEEEcccceEEEEEEC--CCC--cEEEEEeeccc----ccCCCEEEc--HHHHHHHHHHHHHHHHHhcCCc--cC
Confidence 456899999999999999963 233 34444444332 122344433 466678888887777666 554 34
Q ss_pred EEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEE
Q 008237 90 RAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCE 169 (573)
Q Consensus 90 ~~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~ 169 (573)
.++.|...+.+.|+.+++.++.+.+|+++..|+++.||...+.|.. .++++|||||||+++++.++.+.+..
T Consensus 94 ~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~viDiGggst~~~~~~~g~~~~~~ 165 (272)
T 3h1q_A 94 QAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGIVVDIGGGTTGIAVIEKGKITATF 165 (272)
T ss_dssp EEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEETTEEEEEC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEEEEEECCCcEEEEEEECCEEEEEe
Confidence 6688888888999999999999999999999999999998887641 26999999999999999999999999
Q ss_pred EEehhHHHHHHhhc
Q 008237 170 SVNLGHVSLSEKFG 183 (573)
Q Consensus 170 SlplG~vrl~e~f~ 183 (573)
++|+|..++++.+.
T Consensus 166 ~~~~Gg~~~~~~l~ 179 (272)
T 3h1q_A 166 DEPTGGTHLSLVLA 179 (272)
T ss_dssp CBSCCHHHHHHHHH
T ss_pred cCCCcHHHHHHHHH
Confidence 99999999999653
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.21 E-value=2.3e-05 Score=81.88 Aligned_cols=71 Identities=23% Similarity=0.212 Sum_probs=55.1
Q ss_pred HHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhhc
Q 008237 112 EKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFG 183 (573)
Q Consensus 112 ~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f~ 183 (573)
+..|+++..|.-+--|-....|...... .+...+++|||||+|.++++++|.+.++.++|+|.-.+++...
T Consensus 161 ~~aGl~~~~i~~ep~Aaa~~~~~~~~~~-~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~ 231 (377)
T 2ych_A 161 RGAGLVPVVLDVKPFAGLYPLEARLAEE-PDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIA 231 (377)
T ss_dssp HHTTCEEEEEEEHHHHTTGGGHHHHHTS-TTCEEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHH
T ss_pred HHCCCceEEEecchHHHHHHHHhhcccc-cCCeEEEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHH
Confidence 4568888888887777665555432211 1234699999999999999999999999999999999988653
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.18 E-value=3.8e-05 Score=81.76 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=36.5
Q ss_pred ceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhh
Q 008237 144 LVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (573)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (573)
..+++|||||+|.++++.+|.+.++.++|+|.-.+++..
T Consensus 207 gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dI 245 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDV 245 (419)
T ss_dssp CEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHH
Confidence 589999999999999999999999999999999998854
No 13
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=98.16 E-value=8e-06 Score=87.23 Aligned_cols=73 Identities=22% Similarity=0.354 Sum_probs=56.7
Q ss_pred cEEEEEehhhhhcCC--hHHHHHHHHHHcC-------C-------cEEEeChHHHHHHHHhhhhccCCC-----------
Q 008237 88 HTRAVATAAVRAAEN--KDEFVECVREKVG-------F-------EVDVLTGEQEAKFVYMGVLQFLPV----------- 140 (573)
Q Consensus 88 ~i~~vATsA~R~A~N--~~~fl~~i~~~tG-------~-------~i~VIsg~eEA~l~~~gv~~~~~~----------- 140 (573)
-|.+.||+.||.-.- ++.+++.++..+- + .++||||+||+.|.|+++-.-+.-
T Consensus 158 PV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~gF~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~ 237 (611)
T 4a57_A 158 PVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMID 237 (611)
T ss_dssp EEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGCCCEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEEC
T ss_pred cEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccCcccccCCCceeecCCccceeeEeeehhhhhccccccccccccc
Confidence 478899999998753 6788888876653 1 389999999999999998643211
Q ss_pred -------CCCceEEEEeCCCceEEEEe
Q 008237 141 -------FDRLVLSVDIGGGSTEFVIG 160 (573)
Q Consensus 141 -------~~~~~lviDIGGGStEl~~~ 160 (573)
.....-++|+|||||+|++.
T Consensus 238 ~~~~~~~~~~TvG~LDLGGASTQIaF~ 264 (611)
T 4a57_A 238 EYGVKQCRNDLAGVVEVGGASAQIVFP 264 (611)
T ss_dssp TTSCEEEECCCCEEEEECSSCEEEEEE
T ss_pred cccccCCCCceeEEEeeCCceEEEEec
Confidence 12346899999999999985
No 14
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=97.57 E-value=0.00033 Score=67.72 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=68.7
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC---CCCchhhhHHHHHc-CCCC
Q 008237 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---KKGYHKQSCHIIMN-GDHL 434 (573)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~---~~~~~khs~yiI~n-s~~l 434 (573)
+..|..+|+.+|..|..... . +..++.+||+|||||+..+ ...|...++.++.. .. -
T Consensus 34 ~~~H~~rV~~~a~~la~~~~----~--------------d~~~l~~AaLLHDIg~~~~~~~~~~H~~~ga~~a~~~L~-~ 94 (220)
T 2pq7_A 34 DISHTFRVMENASEIASREK----C--------------DLQKAIIAALLHDIKRPHEALTGVDHAESGAEYASGLLP-T 94 (220)
T ss_dssp SHHHHHHHHHHHHHHHHHHT----C--------------CHHHHHHHHHHTTTTHHHHHHHCCCHHHHHHHHHHHHGG-G
T ss_pred hHHHHHHHHHHHHHHHHHcC----C--------------CHHHHHHHHHHHcCCCcccCCCcCCHHHHHHHHHHHHHH-H
Confidence 34799999999998865442 1 2468999999999998654 24555668887654 22 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhcc
Q 008237 435 YGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQ 487 (573)
Q Consensus 435 ~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~ 487 (573)
.|++..+...++.++++|...... ... ..++.|++.|+.||.
T Consensus 95 ~~~~~~~i~~v~~~I~~H~~~~~~------~~~-----~~~a~Iv~dAD~Lda 136 (220)
T 2pq7_A 95 MGFDISFVAEVSKAIRSHRYSGGL------TPT-----SLTGKILQDADRLDA 136 (220)
T ss_dssp GTCCHHHHHHHHHHHHHCC-----------CCC-----SHHHHHHHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHcCcccCC------CCC-----CHHHHHHHHhhHHhh
Confidence 689999999999999999753211 011 135678888888873
No 15
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=97.20 E-value=0.00099 Score=68.43 Aligned_cols=102 Identities=14% Similarity=0.241 Sum_probs=67.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHH-HHHHHHHhhcccccCCC------------------Cch
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEY-LEAACLLHNIGHFTSKK------------------GYH 421 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~l-L~~Aa~LhdiG~~i~~~------------------~~~ 421 (573)
.|+.+|+.+|..|-.++ |+ ++.+... |..||+|||||+..-+. .|.
T Consensus 169 ~Hs~~Va~la~~la~~l----gl-----------~~~~~~~~l~~aaLLHDIGk~~ip~~il~k~~~L~~~E~~~~~~H~ 233 (328)
T 3tm8_A 169 HHGVTVSTLSIALAQKL----GI-----------TDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMSPEDLALWKKHP 233 (328)
T ss_dssp HHHHHHHHHHHHHHHHH----TC-----------CCHHHHHHHHHHHHHTTGGGTTCSCCCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc----Cc-----------CHHHHHHHHHHHHHHhcCCcccCCHHHHhCCCCCCHHHHHHHHHHH
Confidence 79999999999865443 43 3345566 99999999999874332 388
Q ss_pred hhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhcc
Q 008237 422 KQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQ 487 (573)
Q Consensus 422 khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~ 487 (573)
..++.+++.. .|++ ..++.++++|.......- + ..+..+.+-.++.|+.+|+.+|.
T Consensus 234 ~~G~~~ll~~---~~~~----~~v~~~i~~HHEr~dGsG-P--~gl~g~~I~~~arIv~vaD~~da 289 (328)
T 3tm8_A 234 IEGAQKVQDK---KHFD----QTVINIIGQHEETINGTG-P--KGLREKDMDPLAVLVSSANAMDR 289 (328)
T ss_dssp HHHHHHHTTC---TTSC----HHHHHHHHHTTCCTBSCS-T--TCCBGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCc----HHHHHHHHHhcCCCCCCC-C--CCCCcccCCHHHHHHHHHHHHHH
Confidence 8888855443 3455 456778888875433322 1 22333344557888999988874
No 16
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=97.14 E-value=0.0041 Score=65.41 Aligned_cols=76 Identities=13% Similarity=0.270 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhc-cCCCCCCceEEEEeCCCceEEEEe--eCCeEE---EEEEEehhHHH
Q 008237 105 EFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLPVFDRLVLSVDIGGGSTEFVIG--KRGKVV---FCESVNLGHVS 177 (573)
Q Consensus 105 ~fl~~i~~~tG~~i-~VIsg~eEA~l~~~gv~~-~~~~~~~~~lviDIGGGStEl~~~--~~~~~~---~~~SlplG~vr 177 (573)
..+..+-+..|+++ .+++..+-|-+.| +... ... .+...+|+|+|||+|.++++ .++.+. .....++|.-.
T Consensus 167 ~~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~-~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 244 (409)
T 4gni_A 167 AALIAAAAAADLEVLQLISEPAAAVLAY-DARPEATI-SDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIA 244 (409)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHHHHHT-TC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHH
T ss_pred HHHHHHHHHcCCCeEEEEcCHHHHHHHH-hcccccCC-CCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHH
Confidence 34444555679986 5566555554544 4332 112 24568999999999999885 455433 22357999988
Q ss_pred HHHhh
Q 008237 178 LSEKF 182 (573)
Q Consensus 178 l~e~f 182 (573)
+.+.+
T Consensus 245 ~d~~i 249 (409)
T 4gni_A 245 LDKVL 249 (409)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 17
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=96.80 E-value=0.0047 Score=58.11 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC-----------------------
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~----------------------- 417 (573)
.|+..|+.+|..| +..+++ ++ ..+..|++|||||+...+
T Consensus 22 ~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDiGk~~~~~~il~~~~~~~~~l~~~E~~~~~ 83 (190)
T 3ccg_A 22 KHSLGVMDTAVRL----AGIYNE-----------DT---EKARIAGLVHDCAKKLPGEKIIEICTNEGYELGDEDIRNSY 83 (190)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHTTCCCCHHHHTTTT
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHhcCCCCHHHHHHHHHHcCCCCCHHHHhHHH
Confidence 7999999999975 444443 21 348899999999987542
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhccccC
Q 008237 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQNDC 490 (573)
Q Consensus 418 ~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~s~~ 490 (573)
..|...+++++.+. .|+++++ ++..+++|....|. . ..++.|+.+|+.++..|.
T Consensus 84 ~~H~~~Ga~il~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~-----~~~~~Iv~vAD~i~~~R~ 137 (190)
T 3ccg_A 84 LLHGLAGRILAKKV---IGIDDED---VLNAIEFHTTGRPN--------M-----SLLEKIIYIADYIEPGRE 137 (190)
T ss_dssp C-CHHHHHHHHHHT---TCCCCHH---HHHHHHTTTTCCSS--------C-----CHHHHHHHHHHHHSTTCC
T ss_pred cchHHHHHHHHHHh---cCCCcHH---HHHHHHHhcCCCCC--------C-----CHHHHHHHHHHhCCCCCC
Confidence 24777788877662 4664433 45666777653221 1 236789999999876654
No 18
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=96.67 E-value=0.0051 Score=58.80 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=48.6
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 008237 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (573)
Q Consensus 360 ~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~~~~~khs~yiI~ns~~l~G~s~ 439 (573)
..|..+|.++|..|-... + .+..++.+||+|||||......+ +..++.++..--.=.|++.
T Consensus 27 ~~H~~rV~~~a~~ia~~~----~--------------~d~~~v~~AAlLHDig~~~~~~~-~~~~a~~a~~~L~~~g~~~ 87 (209)
T 3b57_A 27 WSHIKRVWKLSKEIQSKE----G--------------GDLFTIELAALFHDYSDIKLTTD-EQEATKTLINWMETKEIPS 87 (209)
T ss_dssp HHHHHHHHHHHHHHHHHH----C--------------SCHHHHHHHHHHTTCCC--------CHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhccCcccCCCc-hHHHHHHHHHHHHHCCCCH
Confidence 379999999999874322 2 12478999999999998754433 2234443322100158999
Q ss_pred HHHHHHHHHHHHhcCC
Q 008237 440 DEIKLIALLTRFHRKK 455 (573)
Q Consensus 440 ~E~~~iA~ia~~hrk~ 455 (573)
.+...+..++..|+.+
T Consensus 88 ~~~~~V~~~I~~Hs~~ 103 (209)
T 3b57_A 88 ELIKKIIRIIQSVSFK 103 (209)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCcc
Confidence 9999999999999643
No 19
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=96.63 E-value=0.0058 Score=57.33 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC----------------------CC
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS----------------------KK 418 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~----------------------~~ 418 (573)
.|+..|+.+|..| +...|+ ++ ..+..|++|||||+... ..
T Consensus 21 ~Hs~~Va~~A~~l----A~~~g~-----------~~---~~~~~agLLHDIGk~~~~~~il~~~~~~~~~l~~~e~~~~~ 82 (188)
T 2o08_A 21 QHTIGVMETAIDL----AKLYGA-----------DQ---QKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDEL 82 (188)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHHCSCCGGGGSCGGG
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHHcCCCCHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 7999999999975 444443 21 34889999999999832 13
Q ss_pred CchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhccccC
Q 008237 419 GYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQNDC 490 (573)
Q Consensus 419 ~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~s~~ 490 (573)
.|...+++++... .|+++++ +...+++|....|. . ..++.|+.+|+.++..|.
T Consensus 83 ~H~~~G~~il~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~-----~~~~~Iv~vAD~i~~~r~ 135 (188)
T 2o08_A 83 LHAPCGAYYVREE---VGIEDED---VLQAIRFHTTGRPN--------M-----SLLEKIIFLADYIEPNRQ 135 (188)
T ss_dssp SHHHHHHHHHHHH---HCCCCHH---HHHHHHTTTTCCTT--------C-----CHHHHHHHHHHHHSTTCC
T ss_pred hHHHHHHHHHHHc---cCCChHH---HHHHHHHhccCCCC--------C-----CHHHHhhhhhccCCCCCC
Confidence 4777788877652 3553333 45566677643221 1 236789999999876664
No 20
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.62 E-value=0.0069 Score=65.18 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhh
Q 008237 103 KDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (573)
Q Consensus 103 ~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (573)
-+.+.+.+++.+|++|+|=. -|++-+-+|++..-. .+-...++|||||||.+++|.+|.+.++.++|+|.-..|...
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~gG~~VT~DI 446 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMII 446 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTCCEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 46688888888899888766 888888888886532 234589999999999999999999999999999999888753
No 21
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.54 E-value=0.0079 Score=64.91 Aligned_cols=76 Identities=18% Similarity=0.112 Sum_probs=64.2
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHhh
Q 008237 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (573)
Q Consensus 104 ~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (573)
..+.+.+++.+|++|+|=. -|++-+-+|++..-. .+-...++|+|||||.+++|.+|.+.++.++|+|.-..|...
T Consensus 373 ~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~gG~~VT~DI 448 (607)
T 1nbw_A 373 QVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSLLI 448 (607)
T ss_dssp CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSSCEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 4578888888899998866 888888888886532 234589999999999999999999999999999999888743
No 22
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=96.50 E-value=0.015 Score=61.42 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=62.3
Q ss_pred cCCCcccEEEEEehh-hhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhc--cCCCCCCceEEEEeCCCceEE
Q 008237 82 HNISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQ--FLPVFDRLVLSVDIGGGSTEF 157 (573)
Q Consensus 82 ~~v~~~~i~~vATsA-~R~A~N~~~fl~~i~~~tG~~i~-VIsg~eEA~l~~~gv~~--~~~~~~~~~lviDIGGGStEl 157 (573)
.++++....+|-|.. .-...+++...+.+.+..|++.- ++....=| .+++.. .++..+..++|+|+|||.|.+
T Consensus 101 L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa---~~a~~~~~~~~~~~~~glVvDiG~gtt~v 177 (418)
T 1k8k_A 101 LRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLA---LAASWTSRQVGERTLTGTVIDSGDGVTHV 177 (418)
T ss_dssp TCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHH---HHHGGGSTTCCSCCCCEEEEEESSSCEEE
T ss_pred cCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHH---hhhhhcccccCCCCCeEEEEEcCCCceEE
Confidence 455544444555543 33334455566666677899854 44433333 333211 222122368999999999999
Q ss_pred EEeeCCeEEEE--EEEehhHHHHHHhh
Q 008237 158 VIGKRGKVVFC--ESVNLGHVSLSEKF 182 (573)
Q Consensus 158 ~~~~~~~~~~~--~SlplG~vrl~e~f 182 (573)
+.+.+|.+... ..+++|.-.+++.+
T Consensus 178 ~~v~~G~~~~~~~~~~~lGG~~lt~~l 204 (418)
T 1k8k_A 178 IPVAEGYVIGSCIKHIPIAGRDITYFI 204 (418)
T ss_dssp EEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EEeECCEEcccceEEEeCcHHHHHHHH
Confidence 99999988876 88999998888754
No 23
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=96.36 E-value=0.008 Score=56.81 Aligned_cols=94 Identities=15% Similarity=0.046 Sum_probs=62.0
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC----------------------
Q 008237 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK---------------------- 417 (573)
Q Consensus 360 ~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~---------------------- 417 (573)
..|+..|+.+|..| +...|+ ++ ..+..|++|||||+...+
T Consensus 28 ~~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDIGK~~~~~~il~~~~~~~~~l~~~E~~~~ 89 (196)
T 2ogi_A 28 FNHVLGVERAAIEL----AERYGY-----------DK---EKAGLAALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNN 89 (196)
T ss_dssp HHHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTCCHHHHHHHHHHHCCCTGGGGSCHH
T ss_pred HHHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHcCCcCCHHHHHHHHHhcCCCCCHHHHHHH
Confidence 37999999999975 444443 21 348899999999998432
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhccccC
Q 008237 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQNDC 490 (573)
Q Consensus 418 ~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~s~~ 490 (573)
..|...+++++... .|+++++ ++..+++|....|. . ..++.|+.+|+.++..|.
T Consensus 90 ~~H~~~G~~ll~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~-----~~~~~Iv~vAD~i~~~R~ 143 (196)
T 2ogi_A 90 IWHGLVGIYKIQED---LAIKDQD---ILAAIAKHTVGSAQ--------M-----STLDKIVYVADYIEHNRD 143 (196)
T ss_dssp HHHHHTHHHHHHHH---SCCCCHH---HHHHHHTTTTCCSS--------C-----CHHHHHHHHHHHHCTTCC
T ss_pred hccHHHHHHHHHHc---cCCCcHH---HHHHHHHhcCCCCC--------C-----CHHHHhhhhheecCCCCC
Confidence 23667777777652 4564333 45666777653221 1 236789999999876654
No 24
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=96.36 E-value=0.014 Score=56.34 Aligned_cols=77 Identities=10% Similarity=0.010 Sum_probs=49.7
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 008237 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (573)
Q Consensus 360 ~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~~~~~khs~yiI~ns~~l~G~s~ 439 (573)
..|..+|.++|..|. +...+. +..++.+||+|||||..... +...|..+...--.=.|++.
T Consensus 27 ~~H~~rV~~~a~~i~---a~~~~~--------------d~~~l~lAAlLHDigk~~~~--~~~~ga~~a~~~L~~~g~~~ 87 (225)
T 2qgs_A 27 IAHVERVYNNACYIA---KRENIT--------------DTLVIELSSLLHDTVDSKLT--DEILAYDQLKQFLSTLDLSS 87 (225)
T ss_dssp HHHHHHHHHHHHHHH---HHTTCS--------------CCHHHHHHHHHTTTTCCSSS--CHHHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHHHH---hhccCC--------------CHHHHHHHHHHHcCCCCCCC--cHHHHHHHHHHHHHHCCCCH
Confidence 379999999998762 222221 13689999999999984322 34444433321100258999
Q ss_pred HHHHHHHHHHHHhcCC
Q 008237 440 DEIKLIALLTRFHRKK 455 (573)
Q Consensus 440 ~E~~~iA~ia~~hrk~ 455 (573)
.++..+..++++|+.+
T Consensus 88 ~~i~~V~~~I~~Hs~~ 103 (225)
T 2qgs_A 88 EISQQVLYIIKHMSYR 103 (225)
T ss_dssp HHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHcCcc
Confidence 9999999999988644
No 25
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.35 E-value=0.039 Score=57.34 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHc-CCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEE
Q 008237 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (573)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lvi 148 (573)
..|+..++.++.+ +.+..++ +++.-|.=...+++.+.+. -+..|+++..+--|=+|-..+.|.... ..+...+|+
T Consensus 136 ~~l~~l~~~a~~~~~~~~~~~-vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~vlV~ 211 (394)
T 3qfu_A 136 MILGKMKQIAEDYLGTKVTHA-VVTVPAYFNDAQRQATKDA-GTIAGLNVLRIVNEPTAAAIAYGLDKS--DKEHQIIVY 211 (394)
T ss_dssp HHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTTTSC--SSCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcceE-EEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHHhhccC--CCCceEEEE
Confidence 3456666666555 4332222 2332222222223334444 466899965444444444444443322 123457999
Q ss_pred EeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHhh
Q 008237 149 DIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (573)
Q Consensus 149 DIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (573)
|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 212 D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l 250 (394)
T 3qfu_A 212 DLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKI 250 (394)
T ss_dssp EECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHH
Confidence 9999999999876 33321 1445789988887654
No 26
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=96.34 E-value=0.01 Score=57.40 Aligned_cols=78 Identities=15% Similarity=0.028 Sum_probs=49.0
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008237 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (573)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~~~~~khs~yiI~ns~~l~G~s 438 (573)
+..|..+|+++|..|-... + .+..++.+||+|||||..- +..|..-++.++..-=.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~~l~~AalLHDig~~k-~~~~~~~ga~~a~~~L~~~g~~ 86 (223)
T 3dto_A 26 DWYHIRRVTLMAKAIGEQE----K--------------VDVFVVQIAALFHDLIDDK-LVDDPETAKQQLIDWMEAAGVP 86 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHT----T--------------CCHHHHHHHHHHHSTTC--------CHHHHHHHHHHHTTTCC
T ss_pred cHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhhccccc-cCCCHHHHHHHHHHHHHHcCCC
Confidence 3479999999999875421 2 1257899999999999753 3333344443332110026899
Q ss_pred HHHHHHHHHHHHHhcCC
Q 008237 439 TDEIKLIALLTRFHRKK 455 (573)
Q Consensus 439 ~~E~~~iA~ia~~hrk~ 455 (573)
..++..|..++..|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3dto_A 87 SQKIDHTMDIINTISFK 103 (223)
T ss_dssp HHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 99999999999988643
No 27
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.25 E-value=0.031 Score=58.04 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=61.3
Q ss_pred HcCCCcccEEEEEehh-hhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 008237 81 SHNISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (573)
Q Consensus 81 ~~~v~~~~i~~vATsA-~R~A~N~~~fl~~i~~~tG~~i-~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~ 158 (573)
..++++.+..++-|.. .-...+++.+.+.+.+..|++. .++. |+-++.+|.- . ..++|+|+|||.|.++
T Consensus 93 ~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~---e~~aaa~a~g--~----~~~lVvDiG~gtt~v~ 163 (375)
T 2fxu_A 93 ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI---QAVLSLYASG--R----TTGIVLDSGDGVTHNV 163 (375)
T ss_dssp TSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEE---HHHHHHHHTT--C----SSEEEEEECSSCEEEE
T ss_pred hcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEcc---chheeeeecC--C----CeEEEEEcCCCceEEe
Confidence 3466543433455543 3333455567777777789874 4444 4444444421 1 3489999999999999
Q ss_pred EeeCCeEEE--EEEEehhHHHHHHhh
Q 008237 159 IGKRGKVVF--CESVNLGHVSLSEKF 182 (573)
Q Consensus 159 ~~~~~~~~~--~~SlplG~vrl~e~f 182 (573)
.+.+|.+.. ..++|+|.-.+++.+
T Consensus 164 ~v~~G~~~~~~~~~~~~GG~~lt~~l 189 (375)
T 2fxu_A 164 PIYEGYALPHAIMRLDLAGRDLTDYL 189 (375)
T ss_dssp EEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EeECCEEeccceEEeccCHHHHHHHH
Confidence 999998776 578999998888754
No 28
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=96.22 E-value=0.0097 Score=57.81 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=48.4
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 008237 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (573)
Q Consensus 360 ~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~~~~~khs~yiI~ns~~l~G~s~ 439 (573)
..|..+|.++|..|-... + .+..++.+||+|||||..- +..+...+..+...-=.=.||+.
T Consensus 32 ~~H~~rV~~~a~~ia~~~----~--------------~d~~ll~lAAlLHDigk~k-~~~~~~~ga~~a~~~L~~~g~~~ 92 (231)
T 2pjq_A 32 RDHLQRVNRLARRLAKDE----G--------------ANLNLTLAAAWLHDVIDDK-LMANPAKAHQDLIVQLNAQNVTA 92 (231)
T ss_dssp HHHHHHHHHHHHHHHHHH----T--------------CCHHHHHHHHHHHHHHC----------CHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHHcCCccc-CCChHHHHHHHHHHHHHHCCCCH
Confidence 379999999999874332 2 1247899999999999842 22332323333221100158999
Q ss_pred HHHHHHHHHHHHhcCC
Q 008237 440 DEIKLIALLTRFHRKK 455 (573)
Q Consensus 440 ~E~~~iA~ia~~hrk~ 455 (573)
.+...+..++..|+.+
T Consensus 93 ~~~~~V~~~I~~Hs~~ 108 (231)
T 2pjq_A 93 DDQTAIFAIIDHMSFS 108 (231)
T ss_dssp HHHHHHHHHHTSCCTG
T ss_pred HHHHHHHHHHHHcCCc
Confidence 9999999999988643
No 29
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=96.07 E-value=0.011 Score=57.10 Aligned_cols=78 Identities=13% Similarity=0.027 Sum_probs=51.9
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 008237 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (573)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~~~~~khs~yiI~ns~~l~G~s 438 (573)
+..|..+|.++|..|-. ..+ .+..++.+||+|||||.. -+.+|..-++.++..-=.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~----~~~--------------~d~~~l~~AAlLHDig~~-k~~~h~~~ga~~a~~~L~~~g~~ 86 (223)
T 3djb_A 26 DWYHIRRVHKMAISLSE----QEG--------------GNRFIIEMAALLHDVADE-KLNESEEAGMKKVSDWLEELHVE 86 (223)
T ss_dssp THHHHHHHHHHHHHHHT----TTC--------------SCHHHHHHHHTTHHHHC---CCSSSTTTHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHHHHHH----HcC--------------CCHHHHHHHHHHhhcccc-ccCCcHHHHHHHHHHHHHHCCCC
Confidence 34799999999998632 212 235799999999999984 33344455543332110026899
Q ss_pred HHHHHHHHHHHHHhcCC
Q 008237 439 TDEIKLIALLTRFHRKK 455 (573)
Q Consensus 439 ~~E~~~iA~ia~~hrk~ 455 (573)
..++..|..++..|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3djb_A 87 EEESKHVLHIIANMSYK 103 (223)
T ss_dssp HHHHHHHHHHTTCCC--
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999999999998643
No 30
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.78 E-value=0.089 Score=53.64 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHHHHHHh
Q 008237 103 KDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEK 181 (573)
Q Consensus 103 ~~~fl~~i~~~tG~~i~-VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~ 181 (573)
++.+.+ +-+..|+++- +++...=|.+.| |.. .. .+...+|+|+|||+|.++.+..+.+....+.++|.-.+++.
T Consensus 111 r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~-~~~--~~-~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 111 RRAILD-AGLEAGASKVFLIEEPMAAAIGS-NLN--VE-EPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHH-HHHHTTCSEEEEEEHHHHHHHHT-TCC--TT-SSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHH
T ss_pred HHHHHH-HHHHcCCCeEeccCCHHHHHHhc-CCC--CC-CCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHH
Confidence 334444 5567899864 455444444433 321 11 23468999999999999999999999999999999888875
Q ss_pred h
Q 008237 182 F 182 (573)
Q Consensus 182 f 182 (573)
+
T Consensus 186 l 186 (344)
T 1jce_A 186 I 186 (344)
T ss_dssp H
T ss_pred H
Confidence 5
No 31
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=95.62 E-value=0.17 Score=54.75 Aligned_cols=108 Identities=16% Similarity=0.235 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHc-CCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceE
Q 008237 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (573)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i~-VIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (573)
...|+..++.++.+ +.+..++ +++--|.=....++...+ +-+..|+++- +++...=|-+. .|.... .+...+
T Consensus 91 a~~L~~l~~~ae~~l~~~~~~~-VitvPa~~~~~qr~a~~~-a~~~AGl~~~~li~Ep~AAAla-y~~~~~---~~~~vl 164 (509)
T 2v7y_A 91 AIILQYLKSYAEDYLGEPVTRA-VITVPAYFNDAQRQATKD-AGRIAGLEVERIINEPTAAALA-YGLDKE---EDQTIL 164 (509)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHH-TTGGGS---CSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHHHHHHHHH-HHHHcCCCeEEEecCHHHHHHH-HhhccC---CCCEEE
Confidence 34466666655553 4332222 232222111112333444 4466799865 55544444444 344321 245689
Q ss_pred EEEeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHhh
Q 008237 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (573)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (573)
|+|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 165 V~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 205 (509)
T 2v7y_A 165 VYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVI 205 (509)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHH
Confidence 999999999999887 45432 1345689988777654
No 32
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=94.77 E-value=0.042 Score=56.55 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=44.3
Q ss_pred cEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceEEEEee--CCeEEE--EEEEehhHHHHHHh
Q 008237 117 EVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGK--RGKVVF--CESVNLGHVSLSEK 181 (573)
Q Consensus 117 ~i~VIsg~eEA~l~~~gv~~~~~~--~~~~~lviDIGGGStEl~~~~--~~~~~~--~~SlplG~vrl~e~ 181 (573)
++++++..-=|.+.|+ ...+. .+...+|+|||||.|++++++ +|.+.. +.++++|.-.+++.
T Consensus 165 ~v~li~Ep~AAa~~~l---~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~ 232 (346)
T 2fsj_A 165 RLIMRPQGVGAALYLL---NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISA 232 (346)
T ss_dssp EEEEEETTHHHHHHHH---HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHH
T ss_pred EEEEEccHHHHHHHhh---ccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHH
Confidence 4667877777777662 22222 224469999999999999999 776666 58999998766653
No 33
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.65 E-value=0.7 Score=46.35 Aligned_cols=141 Identities=16% Similarity=0.131 Sum_probs=87.0
Q ss_pred ccccccCCCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 008237 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHN 83 (573)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~ 83 (573)
|||+ .++..||+|..++++.+++.. |. ++.+.+.++... . =.++.++...++++.+. ++.+
T Consensus 2 ~~m~-----~~~lgiDiggt~~~~~l~d~~--g~--il~~~~~~~~~~----~---~~~~~~~~l~~~i~~~~---~~~~ 62 (326)
T 2qm1_A 2 NAMD-----KKIIGIDLGGTTIKFAILTTD--GV--VQQKWSIETNIL----E---DGKHIVPSIIESIRHRI---DLYN 62 (326)
T ss_dssp CGGG-----CEEEEEEECSSEEEEEEEETT--CC--EEEEEEEECCCT----T---TTTTHHHHHHHHHHHHH---HHTT
T ss_pred CCcc-----cEEEEEEECCCEEEEEEECCC--CC--EEEEEEEcCCCC----C---CHHHHHHHHHHHHHHHH---HHcC
Confidence 6665 467899999999999999753 43 444444333210 1 12455666666666654 3455
Q ss_pred CCcccEEE--EEehhhhh--------cCC----hH-HHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceE
Q 008237 84 ISRDHTRA--VATAAVRA--------AEN----KD-EFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVL 146 (573)
Q Consensus 84 v~~~~i~~--vATsA~R~--------A~N----~~-~fl~~i~~~tG~~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~l 146 (573)
++..++.. ++....-+ +.| .. .+.+.+++.+|++|.+.+.-.=+-+.- .|... ..++.+
T Consensus 63 ~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~~~----~~~~~~ 138 (326)
T 2qm1_A 63 MKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGE----NNPDVI 138 (326)
T ss_dssp CCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEE
T ss_pred CCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHHhCCCC----CCCcEE
Confidence 54344543 45555322 222 12 678888999999999887655554442 23221 224589
Q ss_pred EEEeCCCceEEEEeeCCeEEEE
Q 008237 147 SVDIGGGSTEFVIGKRGKVVFC 168 (573)
Q Consensus 147 viDIGGGStEl~~~~~~~~~~~ 168 (573)
++-+|.| +-..+..+|++...
T Consensus 139 ~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 139 FITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp EEEESSS-EEEEEEETTEECCC
T ss_pred EEEECCc-eEEEEEECCEEeec
Confidence 9999999 66777778887653
No 34
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=94.53 E-value=0.008 Score=58.74 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=50.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC----CCchhhhHHHH---HcCCC
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----KGYHKQSCHII---MNGDH 433 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~----~~~~khs~yiI---~ns~~ 433 (573)
.|..+|.++|..| ....+ .+..++.+||+|||||..-.+ ..|..-++.++ +...
T Consensus 28 ~H~~rV~~~a~~i----a~~~~--------------~d~~~~~~AalLHDig~~~~~~~~~~~H~~~ga~~A~~~L~~~- 88 (239)
T 3gw7_A 28 CHFRRVWATAQKL----AADDD--------------VDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREE- 88 (239)
T ss_dssp CHHHHHHHHHHHH----TTTSC--------------SCTTHHHHHHHHTTTTC--------CCSSHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHH----HHHcC--------------CCHHHHHHHHHHhhcccccccCCccccHHHHHHHHHHHHHHhc-
Confidence 7999999999875 32222 123689999999999986321 12334444333 3332
Q ss_pred CCCCCHHHHHHHHHHHHHhcCC
Q 008237 434 LYGYSTDEIKLIALLTRFHRKK 455 (573)
Q Consensus 434 l~G~s~~E~~~iA~ia~~hrk~ 455 (573)
+.||+..++..|..++..|+.+
T Consensus 89 ~~g~~~e~i~~V~~~I~~Hs~~ 110 (239)
T 3gw7_A 89 FEQFPAEKIEAVCHAIAAHSFS 110 (239)
T ss_dssp TTSSCTTTTTSTTTGGGSSCTT
T ss_pred cCCcCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999988743
No 35
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=94.21 E-value=0.073 Score=53.69 Aligned_cols=95 Identities=16% Similarity=0.079 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC-----------------------
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~----------------------- 417 (573)
.|+.+|+.+|..|- ...++. +...+..|++|||||+..=+
T Consensus 121 ~hs~~va~~a~~la----~~~~~~-------------~~~~~~~agllHDIGkl~l~~~~p~~~~~il~~~~~~~~~l~~ 183 (305)
T 3hc1_A 121 AHSLGVARIAKLIA----ERTGFL-------------NPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQ 183 (305)
T ss_dssp HHHHHHHHHHHHHH----HHTTCS-------------CHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHH----HHcCCC-------------CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 68999999998754 333321 23568899999999986521
Q ss_pred -------CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhccccC
Q 008237 418 -------KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQNDC 490 (573)
Q Consensus 418 -------~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~s~~ 490 (573)
..|..-+++++.+.+ ++ ..++.+++||+....... . +..++.|+.+|+.++.-..
T Consensus 184 ~E~~~~~~~H~~iG~~ll~~w~-lp-------~~i~~~I~~HHe~~~~~~-----~-----~~~~a~Iv~lAD~~~~~~~ 245 (305)
T 3hc1_A 184 AEERLFGTSHCEVGFALAKRWS-LN-------EFICDTILYHHDIEAVPY-----K-----QAAIVAMVAFADEYCTLRR 245 (305)
T ss_dssp HHHHHHSSCHHHHHHHHHHHTT-CC-------HHHHHHHHHTTCGGGCSS-----S-----CCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHHHcC-CC-------HHHHHHHHHhCChhhccc-----c-----ccHHHHHHHHHHHHHHHhC
Confidence 367777888887765 54 346666778765221110 0 1237889999999987654
No 36
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=93.88 E-value=0.057 Score=55.12 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=57.0
Q ss_pred cEEEEEehhhhhc---CChHHHHHHHHHH--c-----CC-------cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEe
Q 008237 88 HTRAVATAAVRAA---ENKDEFVECVREK--V-----GF-------EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDI 150 (573)
Q Consensus 88 ~i~~vATsA~R~A---~N~~~fl~~i~~~--t-----G~-------~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDI 150 (573)
.+..+..=-+.+- +.++.|.+.++.. . |. ++.|+...-=|.+.+ .. ...+...+++||
T Consensus 105 ~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~---~~--~~~~~~v~vvDi 179 (329)
T 4apw_A 105 KVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLE---QE--NFKNKNVAVIDF 179 (329)
T ss_dssp EEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHS---CC--CCTTCEEEEEEE
T ss_pred eEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhc---ch--hhccCCEEEEEe
Confidence 3544544333333 3477888887642 1 21 244554433222221 11 123456899999
Q ss_pred CCCceEEEEeeCCeEE--EEEEEehhHHHHHHhh
Q 008237 151 GGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (573)
Q Consensus 151 GGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (573)
|||.|+++++.++.+. .+.|+|+|.-.+++..
T Consensus 180 GggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i 213 (329)
T 4apw_A 180 GGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRV 213 (329)
T ss_dssp CSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred CCCcEEEEEEECCEEeeccccchhhHHHHHHHHH
Confidence 9999999999999988 4579999999998854
No 37
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=93.72 E-value=0.58 Score=46.16 Aligned_cols=115 Identities=16% Similarity=0.219 Sum_probs=63.0
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE-
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV- 92 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v- 92 (573)
++..||+||.+++.++++- +| +++.....++. + .. .+++.++ +++..+ .+++..+|..+
T Consensus 4 ~~lGiD~Gst~~k~~l~d~--~g--~i~~~~~~~~~---~-----~~-~~~~~~~---l~~l~~----~~~~~~~i~~i~ 63 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD--GK--EIVAKSLVAVG---T-----GT-SGPARSI---SEVLEN----AHMKKEDMAFTL 63 (270)
T ss_dssp EEEEEEECSSEEEEEEEET--TT--EEEEEEEEECC---S-----SC-CHHHHHH---HHHHHH----HTCCGGGCSEEE
T ss_pred EEEEEEeccceEEEEEEeC--CC--CEEEEEEecCC---C-----CH-HHHHHHH---HHHHHH----cCCChhHEEEEE
Confidence 5789999999999999963 45 34554433331 1 11 1444433 333322 13332344434
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008237 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (573)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (573)
+|---|..-.. .+. .+++ |-+|. +.|+....+ +. ..++||||+.+.++.+++|.+.
T Consensus 64 ~TG~g~~~~~~----------~~~--~~v~-Ei~ah--~~ga~~~~~--~~-~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 64 ATGYGRNSLEG----------IAD--KQMS-ELSCH--AMGASFIWP--NV-HTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp EESTTTTTTTT----------TCS--EEEC-HHHHH--HHHHHHHCT--TC-CEEEEEETTEEEEEEEETTEEE
T ss_pred EeCccccchhh----------cCC--CCcc-cHHHH--HHHHHHhCC--CC-CEEEEECCCceEEEEEeCCcee
Confidence 45444432211 122 3333 33343 345544444 22 3789999999999999999865
No 38
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=93.59 E-value=0.38 Score=50.01 Aligned_cols=110 Identities=16% Similarity=0.224 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHc-CCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCC-CCCceE
Q 008237 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPV-FDRLVL 146 (573)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i-~VIsg~eEA~l~~~gv~~~~~~-~~~~~l 146 (573)
..|+..++.++.+ +.+..+ .+++--|.=....++ .+.++-+..|+++ .+++..+-|-+.| +.....+. .+...+
T Consensus 141 ~~L~~l~~~a~~~~~~~~~~-~vitvPa~~~~~~r~-~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~~~~~~vl 217 (404)
T 3i33_A 141 MVLTKMKEIAEAYLGGKVHS-AVITVPAYFNDSQRQ-ATKDAGTITGLNVLRIINEPTAAAIAY-GLDKKGCAGGEKNVL 217 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCCE-EEEEECTTCCHHHHH-HHHHHHHHHTCEEEEEEEHHHHHHHHT-TTTSSCSSSSCCEEE
T ss_pred HHHHHHHHHHHHHhccCCCc-EEEEECCCCCHHHHH-HHHHHHHHcCCCeEEEeccHHHHHHHH-HhhcccccCCCceEE
Confidence 3455555555544 443222 233332222222233 3444456679985 4566555555443 44332221 235589
Q ss_pred EEEeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHhh
Q 008237 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (573)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (573)
|+|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 218 V~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 218 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 999999999999885 44332 2445789988777654
No 39
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=93.33 E-value=0.38 Score=51.85 Aligned_cols=150 Identities=13% Similarity=0.089 Sum_probs=87.6
Q ss_pred EEEEecccceEEEEEEEeCCCCEE-----EEEeee----eeeeeccC-C------------CcCCCCC-HHHHHHHHHHH
Q 008237 16 ASIDMGTSSFKLLIIRAYPNGKFL-----TIDTLK----QPVILGRD-L------------SSSCSIS-TQSQARSVESL 72 (573)
Q Consensus 16 AvIDIGSNsirL~I~e~~~~~~~~-----~i~~~k----~~vrLg~~-~------------~~~g~ls-~e~i~r~~~~L 72 (573)
-|||+||.++|.-.+. ++.++ ++.+.+ ...-.|+. . .++|.|. -+.+++.++-+
T Consensus 26 iVID~GS~~~kaG~ag---~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~~~ 102 (498)
T 3qb0_A 26 VVIDPGSYTTNIGYSG---SDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWA 102 (498)
T ss_dssp EEEECCSSEEEEEETT---CSSCSEEEESEEEEESSCSSCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHHHHHHH
T ss_pred EEEECCCcEEEEEECC---CCCeeeecCceeEEeccCCCccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHHHHHHH
Confidence 5899999999876542 22221 222211 12234432 1 1345444 45565444432
Q ss_pred HHHHHHHHHcCCCcc-cEEEEEehhhhh-cCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEE
Q 008237 73 LMFRDIIQSHNISRD-HTRAVATAAVRA-AENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVD 149 (573)
Q Consensus 73 ~~f~~~~~~~~v~~~-~i~~vATsA~R~-A~N~~~fl~~i~~~tG~~i-~VIsg~eEA~l~~~gv~~~~~~~~~~~lviD 149 (573)
|. +..++.+. ++.++-|.+.-. ..|++.+.+.+.+..|++- -++. ++-+..+|.- . ..++|+|
T Consensus 103 --f~---~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~---~~vlalya~G--~----~tglVVD 168 (498)
T 3qb0_A 103 --LQ---NELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAP---TSTCVSFAAG--R----PNCLVVD 168 (498)
T ss_dssp --HH---HTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEE---HHHHHHHHHT--C----SSEEEEE
T ss_pred --HH---hhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecc---hHHHHHHHcC--C----CeEEEEE
Confidence 22 23455432 213466655433 2356677777777788873 3443 4445544432 2 2379999
Q ss_pred eCCCceEEEEeeCCeEE--EEEEEehhHHHHHHhh
Q 008237 150 IGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (573)
Q Consensus 150 IGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (573)
+|+|.|+++-+-+|.++ ...++++|.-.+++.+
T Consensus 169 iG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 169 IGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp ECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred cCCCcEEEEEEeCCEEccccceeccccHHHHHHHH
Confidence 99999999999899887 3578999998888743
No 40
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.27 E-value=0.12 Score=54.29 Aligned_cols=59 Identities=20% Similarity=0.202 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc---------c-CCCCchhhhHHHHH
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-SKKGYHKQSCHIIM 429 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~---------i-~~~~~~khs~yiI~ 429 (573)
.|+--|+.+|..+.+.+..... .+++.+..++++||+|||||.. + ....|...|..++.
T Consensus 58 ~HSLgV~~la~~l~~~l~~~~~----------~~~~~d~~~~~~AaLlHDiGh~PfsH~~E~~~~~~~~He~~s~~ii~ 126 (410)
T 2q14_A 58 QHSLGAFYLMSEAITQLTSKGN----------FIFDSEAEAVQAAILLHDIGHGPFSHVLEDTIVQGVSHEEISLMLME 126 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHTTTTCCTTHHHHHTTTSTTCCHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHHHHhcCC----------CCCHHHHHHHHHHHHHhccCCCccccccHHhhcCCCCHHHHHHHHHH
Confidence 7999999999999888764311 2445567899999999999972 1 13566666776665
No 41
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=93.12 E-value=1.5 Score=43.66 Aligned_cols=130 Identities=12% Similarity=0.089 Sum_probs=79.1
Q ss_pred CCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccE--
Q 008237 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHT-- 89 (573)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i-- 89 (573)
++++..||+|..++|+.+++. +|. ++.+.+.+. .... . =.++.++...++++++. ++.+++..++
T Consensus 10 ~~~~lGiDiGgT~i~~~l~d~--~G~--il~~~~~~~---~~~~-~--~~~~~~~~l~~~i~~~l---~~~~~~~~~i~~ 76 (305)
T 1zc6_A 10 IRYLIGVDGGGTGTRIRLHAS--DGT--PLAMAEGGA---SALS-Q--GIAKSWQAVLSTLEAAF---QQAGLPAAPASA 76 (305)
T ss_dssp CCEEEEEEECSSCEEEEEEET--TCC--EEEEEEESC---CCGG-G--CHHHHHHHHHHHHHHHH---HHTTCCCCCGGG
T ss_pred CCEEEEEEcCccceEEEEEcC--CCC--EEEEEeCCC---CCcc-c--CHHHHHHHHHHHHHHHH---HhcCCChhhhcc
Confidence 347889999999999999975 354 343332210 0100 0 13456677777776664 3445543344
Q ss_pred --EEEEehhhhhcCChHHHHHHHHHHc--CCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeE
Q 008237 90 --RAVATAAVRAAENKDEFVECVREKV--GFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKV 165 (573)
Q Consensus 90 --~~vATsA~R~A~N~~~fl~~i~~~t--G~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 165 (573)
..++....-+..+... ++..+ +.+|.|.+.-.=|.+. .. . .++.+++=+|.|+.-..+..+|++
T Consensus 77 ~~igig~pG~v~~~~~~~----l~~~~~~~~pv~v~NDa~aaa~g---e~---~--~~~~v~v~~GTGigg~~i~~~G~~ 144 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGE----FESQAPGFARLSLATDGYTTLLG---AH---G--GQPGIIVALGTGSIGEALYPDGSH 144 (305)
T ss_dssp EEEEEEESCCCTTSHHHH----HHHTCCCCSEEEEECHHHHHHHH---HT---T--TSSEEEEEESSSEEEEEECTTSCE
T ss_pred ceEEEEecCCCchHHHHH----HHHhCCCCceEEEECCHHHHHHh---hc---C--CCCeEEEEecCCeEEEEEeCCCcE
Confidence 5778887765554432 56667 7999998866555443 21 1 235788889999865555446664
Q ss_pred E
Q 008237 166 V 166 (573)
Q Consensus 166 ~ 166 (573)
.
T Consensus 145 ~ 145 (305)
T 1zc6_A 145 R 145 (305)
T ss_dssp E
T ss_pred E
Confidence 3
No 42
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=93.05 E-value=0.12 Score=51.16 Aligned_cols=89 Identities=12% Similarity=-0.006 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHHHHHHH--------HhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc----CC-----------
Q 008237 361 KAGAQCASIAKDIFEGL--------RKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----SK----------- 417 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l--------~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i----~~----------- 417 (573)
.|..-|+..|..|++.. ....|++. +..+.++.+++.|||||++- .+
T Consensus 28 ~HllDvAava~~L~~~~~~~~r~~la~~~g~~~----------~~~~~~~~~~~~lHDiGK~~~~fq~~~~~~~~~l~~~ 97 (265)
T 3sk9_A 28 AHMLDTAAVALAVLRMEPPRTRALYAEDWGLPE----------EGALAWAAALVGLHDLGKASPVFQAGWEEGKERVQRA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHTSCH----------HHHHHHHHHHHTTTTGGGCSGGGCC------------
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCH----------HHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhc
Confidence 68888888888887763 33333211 12367888999999999971 11
Q ss_pred ----------CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCC
Q 008237 418 ----------KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRS 459 (573)
Q Consensus 418 ----------~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~ 459 (573)
..|..-|++++.+--.=.|++.+....++.++..|++..|..
T Consensus 98 g~~~~~~~~~~~Ha~aGa~ll~~~L~~~g~~~~~~~~ia~~I~gHHG~~p~~ 149 (265)
T 3sk9_A 98 GLPFGELLDWVAHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHGFPANA 149 (265)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSTTTTSCCCH
T ss_pred cCCccccCCCCChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCCCCc
Confidence 235555666664320003888888899999999998887764
No 43
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=92.40 E-value=0.12 Score=53.45 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=45.3
Q ss_pred cEEEeChHHHHHHHHhhhhccCC----CCCCceEEEEeCCCceEEEEeeCCeEE--EEEEEehhHHHHHHhh
Q 008237 117 EVDVLTGEQEAKFVYMGVLQFLP----VFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (573)
Q Consensus 117 ~i~VIsg~eEA~l~~~gv~~~~~----~~~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (573)
+|.|+...-=|.+.+. . ...+ ..+...+|+|||||.|++.++.++.+. .+.|+++|.-.+.+..
T Consensus 156 ~V~v~pE~~~a~~~~~-~-~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i 225 (355)
T 3js6_A 156 GVKIVAQPMGTLLDLN-M-ENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRI 225 (355)
T ss_dssp EEEEEEHHHHHHHHTT-E-ETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EEEEEeCcHHHHHHHH-H-ccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHH
Confidence 5667766555555442 1 1111 024568999999999999999998886 5779999999888754
No 44
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=92.12 E-value=1 Score=49.23 Aligned_cols=108 Identities=20% Similarity=0.295 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHc-CCCcccEEEEEe-hhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCce
Q 008237 69 VESLLMFRDIIQSH-NISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLV 145 (573)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vAT-sA~R~A~N~~~fl~~i~~~tG~~i-~VIsg~eEA~l~~~gv~~~~~~~~~~~ 145 (573)
...|+..++.++.+ |-+.. .+|-| -|.=....++.+.+ +-+..|+++ ++++..+-|-+.| |.....+ .+...
T Consensus 121 a~~L~~lk~~ae~~lg~~v~--~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay-~~~~~~~-~~~~v 195 (554)
T 1yuw_A 121 SMVLTKMKEIAEAYLGKTVT--NAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAY-GLDKKVG-AERNV 195 (554)
T ss_dssp HHHHHHHHHHHHHHHSSCCC--EEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHT-TCSTTCS-SCEEE
T ss_pred HHHHHHHHHHHHHHhCCCCC--eEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHH-HhhccCC-CCcEE
Confidence 34566666655554 43322 23333 22111111233444 445679986 4556555554444 4332211 23568
Q ss_pred EEEEeCCCceEEEEee--CCeEE---EEEEEehhHHHHHHh
Q 008237 146 LSVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEK 181 (573)
Q Consensus 146 lviDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~ 181 (573)
+|+|+|||+|.+++++ +|.+. ...+.++|.-.+.+.
T Consensus 196 lV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~ 236 (554)
T 1yuw_A 196 LIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNR 236 (554)
T ss_dssp EEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred EEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHH
Confidence 9999999999999887 66553 445568888777654
No 45
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=92.04 E-value=0.57 Score=51.74 Aligned_cols=161 Identities=16% Similarity=0.242 Sum_probs=88.6
Q ss_pred CeE-EEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcC------CCCCHHHHHH-HHHHHHH-HHHHHHHc
Q 008237 13 TLF-ASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSS------CSISTQSQAR-SVESLLM-FRDIIQSH 82 (573)
Q Consensus 13 ~~~-AvIDIGSNsirL~I~e~~~~~~-~~~i~~~k~~vrLg~~~~~~------g~ls~e~i~r-~~~~L~~-f~~~~~~~ 82 (573)
+.| -+|||||.++....+++. +|. +......+-.++.|+++-.. +.=..+.+++ .+++|++ +.+++++.
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~-tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~ 283 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLV-SGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEH 283 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETT-TCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecccceeEEEEECC-CCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345 589999999999999987 565 34444556667888887421 1111223333 3445554 45667777
Q ss_pred CCCcccEEE---EEehhh------------hhcCChHHHHHHH---HHHcCCc------EEEe---ChHHHHHHHHhhhh
Q 008237 83 NISRDHTRA---VATAAV------------RAAENKDEFVECV---REKVGFE------VDVL---TGEQEAKFVYMGVL 135 (573)
Q Consensus 83 ~v~~~~i~~---vATsA~------------R~A~N~~~fl~~i---~~~tG~~------i~VI---sg~eEA~l~~~gv~ 135 (573)
+++..+|.. +|-.+| +.|.=...|.+.. ..++|++ |.++ +|.-=|-...--+.
T Consensus 284 ~i~~~~I~~~~v~GNt~M~hLllgi~p~~L~~~Py~p~~~~~~~~~a~~lgl~~~p~~~v~~lP~i~~~VGaDi~Ag~la 363 (631)
T 3zyy_X 284 GVEKKEIMAAVVAGNTTMTHLFLEIDPRYIRLEPYTPAALFIPPVPATEAKIEMNPKGFVYIMPNVASYVGGDITSGVLY 363 (631)
T ss_dssp TCCGGGEEEEEEEECHHHHHHHHTCCCGGGSSTTTCCSCSCCCCEEHHHHTCSSCTTSEEEECCCCBTTBCHHHHHHHHH
T ss_pred CCCHHHeeEEEEEccHHHHHHHcCCChHHhccCCcccccCCCceecHHHcCCCcCCCCEEEEcCcccccccHHHHHHHHh
Confidence 888766543 333332 2221111110000 1234553 3333 33222222111111
Q ss_pred ccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEehhHH
Q 008237 136 QFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHV 176 (573)
Q Consensus 136 ~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~v 176 (573)
..+...++..|++|||. +.|++++.++++ .+.|-+-|..
T Consensus 364 ~~~~~~~~~~L~iDiGT-NgEivL~~~~~l-~~~S~aAGPA 402 (631)
T 3zyy_X 364 TGLANSDEITLFIDIGT-NGEMVLGNKDWL-VTCACSAGPA 402 (631)
T ss_dssp HTTTSCSSCEEEEECSS-EEEEEEECSSCE-EEEEEECCGG
T ss_pred cCcccCCCCEEEEEcCC-CeEEEEeeCCEE-EEEeccCchh
Confidence 22333345689999986 789999987776 4669999984
No 46
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=91.98 E-value=0.89 Score=50.24 Aligned_cols=110 Identities=16% Similarity=0.233 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHc-CCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCce
Q 008237 68 SVESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLV 145 (573)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i-~VIsg~eEA~l~~~gv~~~~~~~~~~~ 145 (573)
....|+..++.++.| |.+..++ +++--|.=... ....+..+-+..|+++ ++|+...-|-+.| |....- .+...
T Consensus 116 ~a~iL~~lk~~ae~~lg~~v~~~-VITVPa~f~~~-qr~a~~~Aa~~AGl~v~~li~EP~AAAlay-gl~~~~--~~~~v 190 (605)
T 4b9q_A 116 SAEVLKKMKKTAEDYLGEPVTEA-VITVPAYFNDA-QRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKGT--GNRTI 190 (605)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHH-HHHHHHHHHHHTTCEEEEEEEHHHHHHHHH-HTTSCC--SSEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHH-HHHHHHHHHHHcCCceEEEeCcHHHHHHHh-hhhccC--CCCEE
Confidence 345577777777766 5443222 22222211111 1223444455679986 5676666665554 443221 23568
Q ss_pred EEEEeCCCceEEEEeeCCe------E---EEEEEEehhHHHHHHhh
Q 008237 146 LSVDIGGGSTEFVIGKRGK------V---VFCESVNLGHVSLSEKF 182 (573)
Q Consensus 146 lviDIGGGStEl~~~~~~~------~---~~~~SlplG~vrl~e~f 182 (573)
+|+|+|||++.+++++-+. + -.....++|.-.+.+.+
T Consensus 191 lV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 191 AVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 9999999999999876433 1 12334578887776644
No 47
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=91.87 E-value=0.31 Score=52.45 Aligned_cols=46 Identities=17% Similarity=0.299 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF 414 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~ 414 (573)
.|+--|+.+|..+.+.|..... +. .++..+..++++||+|||||..
T Consensus 68 ~HSLgV~~la~~i~~~l~~~~~----~~----~~~~~d~~~v~~AaLlHDiGH~ 113 (528)
T 3u1n_A 68 EHSLGVGYLAGCLVHALGEKQP----EL----QISERDVLCVQIAGLCHDLGHG 113 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCG----GG----CCCHHHHHHHHHHHHHTTTTCB
T ss_pred HHHHHHHHHHHHHHHHHHhhCc----cc----CCCHHHHHHHHHHHHHhccCCC
Confidence 7999999999999988874321 00 2344566889999999999954
No 48
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=91.54 E-value=0.94 Score=46.59 Aligned_cols=75 Identities=19% Similarity=0.230 Sum_probs=45.8
Q ss_pred HHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCC------eEE---EEEEEehhHH
Q 008237 106 FVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRG------KVV---FCESVNLGHV 176 (573)
Q Consensus 106 fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~------~~~---~~~SlplG~v 176 (573)
.+.++-+..|+++..+--|=+|-....+.... ..+...+|+|+|||+|.+++++.+ .+. ...+.++|.-
T Consensus 153 ~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 230 (383)
T 1dkg_D 153 ATKDAGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (383)
T ss_dssp HHHHHHHHTTCEESCCCBHHHHHHHHHTCCC---CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred HHHHHHHHcCCceEEEeccHHHHHHHHHhccC--CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence 33444466799865444444444333332211 123468999999999999988743 221 2456799998
Q ss_pred HHHHhh
Q 008237 177 SLSEKF 182 (573)
Q Consensus 177 rl~e~f 182 (573)
.+++.+
T Consensus 231 ~id~~l 236 (383)
T 1dkg_D 231 DFDSRL 236 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888755
No 49
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=91.41 E-value=0.35 Score=50.18 Aligned_cols=76 Identities=24% Similarity=0.356 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc----------CCCCchhhhHHHHHc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----------SKKGYHKQSCHIIMN 430 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i----------~~~~~~khs~yiI~n 430 (573)
.|+..|+.+|..|.+.+. + +++ .++.+||+|||||... ...+|.+-|..++.+
T Consensus 53 ~Hsl~V~~~a~~ia~~~~----~-----------~~~--~~~~~AaLLHDiG~~pfsh~~e~~~~~g~~He~~g~~i~~~ 115 (371)
T 2hek_A 53 EHSLGVYHITERICESLK----V-----------KEK--ELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKE 115 (371)
T ss_dssp HHHHHHHHHHHHHHHHHT----C-----------TTH--HHHHHHHHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------CHH--HHHHHHHHHHhcCccccccchHHHhccCCCHHHHHHHHHhc
Confidence 799999999998865542 1 222 6899999999999975 346777778888653
Q ss_pred CC---CCCC-CCHHHHHHHHHHHHHhc
Q 008237 431 GD---HLYG-YSTDEIKLIALLTRFHR 453 (573)
Q Consensus 431 s~---~l~G-~s~~E~~~iA~ia~~hr 453 (573)
.+ -|.. +++++...++.++..++
T Consensus 116 ~~i~~iL~~~~~~~~i~~I~~~I~~~~ 142 (371)
T 2hek_A 116 TEIYEILKQDYSHEDIERLVRITLGKP 142 (371)
T ss_dssp SHHHHHHHTTSCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 10 0112 78888887887777543
No 50
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=91.10 E-value=0.26 Score=52.55 Aligned_cols=67 Identities=18% Similarity=0.191 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc--------CCCCchhhhHHHHHc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT--------SKKGYHKQSCHIIMN 430 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i--------~~~~~~khs~yiI~n 430 (573)
.|+--|+.+|..+.+.+...+.-..... ..+++.++.++++||+|||||..- -..+|-..|..||.+
T Consensus 89 ~HSLgV~~la~~i~~~l~~~~~~~~~~~---~~~~~~~~~~v~~AaLlHDIGH~PFsH~~E~~~~~~HE~~s~~ii~~ 163 (480)
T 3irh_A 89 SHSLGVYEITRRICEIFQRNYSVERLGE---NGWNDDERLITLCAALLHDVGHGPYSHTFEHIFDTNHEAITVQIITS 163 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSBHHHHGG---GSBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHHCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhCccccccc---cCCCHHHHHHHHHHHHHhccCCCCccchhhhccCCCHHHHHHHHHHc
Confidence 7999999999999998864321000000 024556678999999999999651 134667777777765
No 51
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=91.08 E-value=0.23 Score=50.10 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=59.2
Q ss_pred CCCcccEEEEEehhhh---h---cCChHHHHHHHHHHc-------C-----CcEEEeChHHHHHHHHhhhhccCCCCCCc
Q 008237 83 NISRDHTRAVATAAVR---A---AENKDEFVECVREKV-------G-----FEVDVLTGEQEAKFVYMGVLQFLPVFDRL 144 (573)
Q Consensus 83 ~v~~~~i~~vATsA~R---~---A~N~~~fl~~i~~~t-------G-----~~i~VIsg~eEA~l~~~gv~~~~~~~~~~ 144 (573)
+.+...+.+|.+--+. . .+|.+.+-++.+... | -+++++...-=|.+.+. .... .+..
T Consensus 90 ~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~---~~~~-~~~~ 165 (320)
T 2zgy_A 90 GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVL---QELD-ELDS 165 (320)
T ss_dssp SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHH---HHSC-TTCE
T ss_pred CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhh---cccc-CCCC
Confidence 4433346666654444 2 235566666543211 1 24566666555555543 2221 2345
Q ss_pred eEEEEeCCCceEEEEeeCCeE-EE--EEEEehhHHHHHHhh
Q 008237 145 VLSVDIGGGSTEFVIGKRGKV-VF--CESVNLGHVSLSEKF 182 (573)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~-~~--~~SlplG~vrl~e~f 182 (573)
.+++|||||.|++++++++.+ .. +.+.++|.-.+++..
T Consensus 166 ~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I 206 (320)
T 2zgy_A 166 LLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAV 206 (320)
T ss_dssp EEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHH
Confidence 899999999999999998765 33 578899998888753
No 52
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=90.92 E-value=1.9 Score=48.22 Aligned_cols=111 Identities=17% Similarity=0.252 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHc-CCCcccEEEEEe-hhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhc-cCC---C
Q 008237 68 SVESLLMFRDIIQSH-NISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLP---V 140 (573)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vAT-sA~R~A~N~~~fl~~i~~~tG~~i-~VIsg~eEA~l~~~gv~~-~~~---~ 140 (573)
....|+..++.++.+ |-+.. .+|-| -|.=....++.+.+ +-+..|+++ ++|+...=|-+.| |... .++ .
T Consensus 119 ~a~~L~~lk~~ae~~lg~~v~--~~VITVPa~f~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAlay-gl~~~~~~~~~~ 194 (675)
T 3d2f_A 119 AAMFIDKVKDTVKQDTKANIT--DVCIAVPPWYTEEQRYNIAD-AARIAGLNPVRIVNDVTAAGVSY-GIFKTDLPEGEE 194 (675)
T ss_dssp HHHHHHHHHHHHHHHHCSCCC--EEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHH-HHHCSCCCCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCcc--eEEEEECCCCCHHHHHHHHH-HHHHcCCceEEEEcchHHHHHHH-hhhccccccccC
Confidence 345566666666554 43322 22333 22111111233444 445679986 5666555555555 5433 222 1
Q ss_pred CCCceEEEEeCCCceEEEEee--CCeE-EEE--EEEehhHHHHHHhh
Q 008237 141 FDRLVLSVDIGGGSTEFVIGK--RGKV-VFC--ESVNLGHVSLSEKF 182 (573)
Q Consensus 141 ~~~~~lviDIGGGStEl~~~~--~~~~-~~~--~SlplG~vrl~e~f 182 (573)
.+...+|+|+|||+|.+++++ +|.+ +.+ ...++|.-.+.+.+
T Consensus 195 ~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 195 KPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred CCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 235689999999999999876 6665 222 24689987776643
No 53
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=90.90 E-value=2.4 Score=42.77 Aligned_cols=140 Identities=13% Similarity=0.141 Sum_probs=84.2
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcc---cEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD---HTR 90 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~---~i~ 90 (573)
++..||+|..+++..+++. +|. ++.+.+.+. ...... =.++.++...++++++.+ +.+++.. .-.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~---~~~~~~--~~~~~~~~i~~~i~~~~~---~~~~~~~~~i~gi 74 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSE--DGK--ILAEADGLS---TNHWLI--GTDKCVERINEMVNRAKR---KAGVDPLVPLRSL 74 (347)
T ss_dssp EEEEEEECTTCEEEEEEET--TSC--EEEEEEECC---CCHHHH--CHHHHHHHHHHHHHHHHH---HHTCCTTCCBSEE
T ss_pred EEEEEEcCccceEEEEEeC--CCC--EEEEEeCCC---CCcccC--CHHHHHHHHHHHHHHHHH---hcCCCcccceeEE
Confidence 6789999999999999975 354 343332210 000000 024456666777766654 3344322 235
Q ss_pred EEEehhhhhcCChHHHHHHHHHHcC---CcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEE
Q 008237 91 AVATAAVRAAENKDEFVECVREKVG---FEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (573)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tG---~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (573)
.+|....-+..+...+.+.+++.+| .+|.|.+.-.=|.+.+ .. ++++++=+|.|+--..+..+|....
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~------~~---~~~v~v~~GTGig~~~v~~~G~~c~ 145 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA------TP---DGGVVLISGTGSNCRLINPDGSESG 145 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH------CS---SCEEEEEESSSEEEEEECTTSCEEE
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh------CC---CCcEEEEEcCCceeEEEcCCCCEEe
Confidence 6778776554445577788889997 8999988665555442 11 3478888899987766554665433
Q ss_pred EEEEehhHH
Q 008237 168 CESVNLGHV 176 (573)
Q Consensus 168 ~~SlplG~v 176 (573)
. =..||+
T Consensus 146 c--G~~G~l 152 (347)
T 2ch5_A 146 C--GGWGHM 152 (347)
T ss_dssp E--ECCCTT
T ss_pred c--CCcCcc
Confidence 2 234554
No 54
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=90.41 E-value=0.16 Score=53.10 Aligned_cols=92 Identities=16% Similarity=0.171 Sum_probs=32.8
Q ss_pred CCCcccEEEEEehh-hhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 008237 83 NISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (573)
Q Consensus 83 ~v~~~~i~~vATsA-~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 161 (573)
++++.+..++-|.. .-...|++.+.+.+.+..|++. +.=-.|+-++.+|. ....++|+|+|+|.|.++.+.
T Consensus 99 ~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~--~~~~~~~~~a~~a~------g~~~~lVVDiG~g~T~v~pv~ 170 (394)
T 1k8k_B 99 NIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSG--VYVAIQAVLTLYAQ------GLLTGVVVDSGDGVTHICPVY 170 (394)
T ss_dssp ---------------------------------------------------------------CCEEEECSSCEEEECEE
T ss_pred CcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCe--EEEEhhHHHHHHhC------CCceEEEEEcCCCceEeeeeE
Confidence 34333333455543 3344566667777766666653 22234444444432 123479999999999999999
Q ss_pred CCeEEE--EEEEehhHHHHHHhh
Q 008237 162 RGKVVF--CESVNLGHVSLSEKF 182 (573)
Q Consensus 162 ~~~~~~--~~SlplG~vrl~e~f 182 (573)
+|.+.. ..++|+|.-.+++.+
T Consensus 171 ~G~~~~~~~~~~~~GG~~lt~~l 193 (394)
T 1k8k_B 171 EGFSLPHLTRRLDIAGRDITRYL 193 (394)
T ss_dssp TTEECSTTCEEESCCHHHHHHHH
T ss_pred CCEEcccceEEeeccHHHHHHHH
Confidence 998876 578999988777643
No 55
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=90.05 E-value=3.9 Score=39.81 Aligned_cols=113 Identities=17% Similarity=0.203 Sum_probs=61.7
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE-
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV- 92 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v- 92 (573)
++..||+||.++..+|.+ .++ +++.+...+ +|.- ++. +.++|++.. ++.+.....+..+
T Consensus 2 ~~lGID~GsT~tk~av~d--~~~--~il~~~~~~---------~g~~-~e~---a~~vl~~~~---~~a~~~~~~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK--NGE--DIVASETIS---------SGTG-TTG---PSRVLEKLY---GKTGLAREDIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEEE--TTT--EEEEEEEES---------CCTT-SSH---HHHHHHHHH---HHHCCCGGGEEEEE
T ss_pred eEEEEEcCccEEEEEEEE--CCC--eEEEEEEec---------CCCC-HHH---HHHHHHHHH---HHCCCcchhccccc
Confidence 467899999999988875 334 334322211 1221 122 223444433 3445554445444
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee-CCeE
Q 008237 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK-RGKV 165 (573)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~-~~~~ 165 (573)
.|.+-+.| .+.++..|+-- +|. .+|+....+ ....++|+|||.+.+++.. +|.+
T Consensus 62 ~t~~~~~a-------------~~~~~~~Vne~-~ah--a~a~~~~~~---~~~~vl~lgG~~~~~~~~~~~g~~ 116 (276)
T 4ehu_A 62 VTGYGRMN-------------YSDADKQISEL-SCH--ARGVNFIIP---ETRTIIDIGGQDAKVLKLDNNGRL 116 (276)
T ss_dssp EESTTGGG-------------CCSCSEECCHH-HHH--HHHHHHHST---TCCEEEEECSSCEEEEEECTTSCE
T ss_pred cCchHHHH-------------hhCCCcccchH-HHH--HHHHHHhCC---CCCeEEEEcCCCceEEEEEecCce
Confidence 46666654 34456677643 343 233333333 2248999999999988774 4444
No 56
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=89.77 E-value=8.3 Score=38.27 Aligned_cols=128 Identities=13% Similarity=0.105 Sum_probs=71.8
Q ss_pred CCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008237 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (573)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (573)
++.+...|||||.++++++.+ ++.+ ++. + +. .+.++++++.| +.-.+ .+
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~---~~~i--~~~-~---------~~-----~~~~~~~l~~l-------~~~~~----~~ 66 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQ---DNQR--TFK-T---------EL-----TKNIDQVVEWL-------NQQQI----EK 66 (287)
T ss_dssp ---CEEEEEECSSEEEEEEEC---SSCE--EEE-E---------EE-----GGGHHHHHHHH-------HTSCC----SE
T ss_pred CCCeEEEEEEChhhEEEEEEc---CCEE--EEE-E---------ec-----hHHHHHHHHHh-------cccCc----eE
Confidence 445679999999999999982 3432 222 1 11 11144443333 21122 24
Q ss_pred EEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC---CCCceEEEEeCCCceEEEEeeCCeEEE
Q 008237 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV---FDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (573)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~---~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (573)
+++|--=|. .+. ...|++...++ |-.-...|+..-.+. .-.+.+++|||||-. ++.++++....
T Consensus 67 i~~TG~G~~------~~~---~~l~~~~~~v~---Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-ii~v~~~~f~r 133 (287)
T 2ews_A 67 LCLTGGNAG------VIA---ENINIPAQIFV---EFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDGQSQRR 133 (287)
T ss_dssp EEEESTTHH------HHH---TTSSSCCEECC---HHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-EEEECSSCEEE
T ss_pred EEEEChhHH------hHh---HhhCCCcceee---hhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-EEEEcCCceEE
Confidence 577753332 111 14677766644 333333444322221 012469999999988 99998777776
Q ss_pred EEEEehhHHHHHHhh
Q 008237 168 CESVNLGHVSLSEKF 182 (573)
Q Consensus 168 ~~SlplG~vrl~e~f 182 (573)
.---..|.=++-+..
T Consensus 134 ~~g~aaGgGtFl~l~ 148 (287)
T 2ews_A 134 VGGIGTGGGMIQGLG 148 (287)
T ss_dssp EEEESCSHHHHHHHH
T ss_pred cCccccchhhHHHHH
Confidence 666788988887753
No 57
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=88.88 E-value=1.7 Score=48.03 Aligned_cols=108 Identities=16% Similarity=0.241 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHc-CCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceE
Q 008237 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (573)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i~-VIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (573)
...|+..++.++.| +.+..++ +++--|.=....++.+.+ +-+..|+++. +|+...=|-+.| |.-.. ..+...+
T Consensus 117 a~~L~~l~~~ae~~l~~~v~~~-VitVPa~f~d~qr~a~~~-A~~~AGl~v~~li~EP~AAAlay-~l~~~--~~~~~vl 191 (605)
T 2kho_A 117 AEVLKKMKKTAEDYLGEPVTEA-VITVPAYFNDAQRQATKD-AGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIA 191 (605)
T ss_dssp HHHHHHHHHHHHHHHCSCCCEE-EEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHT-TTTSS--SSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEE-EEEECCCCCHHHHHHHHH-HHHHcCCceEEEecCHHHHHHHh-hhccc--CCCCEEE
Confidence 34566666666655 4332222 222222111111233333 4456799965 555555454544 43221 1235689
Q ss_pred EEEeCCCceEEEEee------CCeEE---EEEEEehhHHHHHHh
Q 008237 147 SVDIGGGSTEFVIGK------RGKVV---FCESVNLGHVSLSEK 181 (573)
Q Consensus 147 viDIGGGStEl~~~~------~~~~~---~~~SlplG~vrl~e~ 181 (573)
|+|+|||+|.+++++ ++.+. .....++|.-.+.+.
T Consensus 192 V~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~ 235 (605)
T 2kho_A 192 VYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSR 235 (605)
T ss_dssp EEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHH
T ss_pred EEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHH
Confidence 999999999999876 34332 234467887665553
No 58
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=88.39 E-value=9.2 Score=39.19 Aligned_cols=134 Identities=14% Similarity=0.084 Sum_probs=82.0
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHH--cCCCcccEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQS--HNISRDHTR 90 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~--~~v~~~~i~ 90 (573)
.++..||||.+++++.+++.. |. ++.+.+.++.. . .=.++.++...++++.+.+-... ..+ .-.
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~--G~--vl~~~~~~~~~----~---~~~~~~~~~l~~~i~~~~~~~~~~~~~i---~gi 152 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDAS--MN--ILAHEAHPLPS----Q---SDREETLNVMYRIIDRAKDMMEKLGSKL---SAL 152 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETT--CC--EEEEEEEECCS----S---CCHHHHHHHHHHHHHHHHHHHHHTTCCC---CEE
T ss_pred CeEEEEEECCCEEEEEEECCC--CC--EEEEEEEccCC----C---CCHHHHHHHHHHHHHHHHHhcCCCcCcE---EEE
Confidence 467899999999999999763 43 34443333211 0 01355677777777777654321 122 224
Q ss_pred EEEehhhhhc--------CC----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceE
Q 008237 91 AVATAAVRAA--------EN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTE 156 (573)
Q Consensus 91 ~vATsA~R~A--------~N----~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStE 156 (573)
.||....=+. .| .-.+.+.+++++|++|.|.+.-.=|-+.-. |... ++.+++-+|.| +-
T Consensus 153 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~------~~~v~l~~GtG-iG 225 (380)
T 2hoe_A 153 TVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTKRD------DSFAWILTGKG-IG 225 (380)
T ss_dssp EEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTTCC------SCEEEEEESSS-CE
T ss_pred EEEeeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHHhCCCC------CcEEEEEeCCc-eE
Confidence 5666554332 22 135678888999999999887655544422 2211 45889999988 45
Q ss_pred EEEeeCCeEEE
Q 008237 157 FVIGKRGKVVF 167 (573)
Q Consensus 157 l~~~~~~~~~~ 167 (573)
..++-+|++..
T Consensus 226 ~giv~~G~l~~ 236 (380)
T 2hoe_A 226 AGIIIDGELYR 236 (380)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 66666777653
No 59
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=88.24 E-value=4 Score=44.57 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=67.9
Q ss_pred HHcCCCccc---EEEEEe-hhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 008237 80 QSHNISRDH---TRAVAT-AAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (573)
Q Consensus 80 ~~~~v~~~~---i~~vAT-sA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGSt 155 (573)
+..++++.+ ..++=| ..+-.-+|++.+++-+.+..|++-=.+. .++-++.+|.- ...++|||+|-+.|
T Consensus 187 ~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~--~~~vla~ya~G------~~tglVVDiG~~~T 258 (593)
T 4fo0_A 187 KYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVH--QESVCATYGSG------LSSTCIVDVGDQKT 258 (593)
T ss_dssp HTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEE--EHHHHHHHHHT------CSEEEEEEECSSCE
T ss_pred HhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEee--chHHHHHHHCC------CCceEEEEeCCCce
Confidence 456776543 334444 4455567788899999999888844333 35666666542 23489999999999
Q ss_pred EEEEeeCCeEE--EEEEEehhHHHHHHhh
Q 008237 156 EFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (573)
Q Consensus 156 El~~~~~~~~~--~~~SlplG~vrl~e~f 182 (573)
-++-+.+|.++ ....+++|.-.+++.+
T Consensus 259 ~v~PV~dG~~l~~~~~rl~~GG~~lt~~L 287 (593)
T 4fo0_A 259 SVCCVEDGVSHRNTRLCLAYGGSDVSRCF 287 (593)
T ss_dssp EEEEEESSCBCGGGCEEESCCHHHHHHHH
T ss_pred eeeeeECCEEehhheEEecccHHHHHHHH
Confidence 99999999876 4578999998888865
No 60
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=87.93 E-value=1.3 Score=43.80 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC---------------------CCC
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---------------------KKG 419 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~---------------------~~~ 419 (573)
.|+..|+.+|..|-..+....+++ ..+...+..|++|||||...= ...
T Consensus 120 ~hs~~vA~~a~~la~~~~~~~~~~-----------~~~~~~~~laGLLHdiGkl~l~~~~~~~~~~l~~~~~~~~~~~~~ 188 (281)
T 3i7a_A 120 RTSIDVTAAACSLLQIYNKKHPGS-----------GLNYDTLTLAGLVHNIGALPVLTEAEAHPEMFTTIEHLRSLVRKM 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTC-----------CCCHHHHHHHHHHTTTTHHHHHHHHHHCGGGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccC-----------CCCHHHHHHHHHHHHCCHHHHHHhHHhhHHHhcChHHHHHHHhCc
Confidence 688899999988765553322221 122356889999999998531 124
Q ss_pred chhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhccc
Q 008237 420 YHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQKFRVLCAIVRLSVILQQN 488 (573)
Q Consensus 420 ~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk~~~~~~~~~~~~l~~~~~~~L~~iLRlA~~Ld~s 488 (573)
|..-+++++.+.+ |.. .+..+++||+........ ..++.++++|+.+...
T Consensus 189 H~~iGa~ll~~w~----lp~----~i~~ai~~Hh~~~~~~~~-----------~~~~~iV~lAd~~~~~ 238 (281)
T 3i7a_A 189 QGPIGRAVLKSWD----FAP----EVMEVVERWADLPYLGDH-----------VSYLDFIRAAAFYTGE 238 (281)
T ss_dssp HHHHHHHHHHHTT----CCH----HHHHHHHHTTCTTCCCSS-----------CCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCC----CCH----HHHHHHHHHcChhhcCCc-----------CCHHHHHHHHHHHcCC
Confidence 6677778776654 332 455566777643321110 1246688899987643
No 61
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=87.59 E-value=1.8 Score=45.60 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=67.0
Q ss_pred HcCCCcccEEEEEehhhhh-cCChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhhhccCCCC--CCceEEEEeCCCceE
Q 008237 81 SHNISRDHTRAVATAAVRA-AENKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGVLQFLPVF--DRLVLSVDIGGGSTE 156 (573)
Q Consensus 81 ~~~v~~~~i~~vATsA~R~-A~N~~~fl~~i~~~tG~~-i~VIsg~eEA~l~~~gv~~~~~~~--~~~~lviDIGGGStE 156 (573)
..++.+.+-.++-|++.-. ..|++...+-+.+..|++ +-++ .++-++.+|.-...... ...++|+|+|+|.|.
T Consensus 116 ~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~---~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~ 192 (427)
T 3dwl_A 116 YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIA---VQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192 (427)
T ss_dssp TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEE---EHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEE
T ss_pred hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeec---chHHHHHHhcCCcccccCCCceEEEEECCCCceE
Confidence 3566654456677765433 345666777776778887 4444 45666666543211111 235899999999999
Q ss_pred EEEeeCCeEEE--EEEEehhHHHHHHhh
Q 008237 157 FVIGKRGKVVF--CESVNLGHVSLSEKF 182 (573)
Q Consensus 157 l~~~~~~~~~~--~~SlplG~vrl~e~f 182 (573)
++-+.+|.++. ..++++|.-.+++.+
T Consensus 193 v~PV~~G~~l~~~~~rl~~gG~~lt~~L 220 (427)
T 3dwl_A 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFV 220 (427)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EEEEECCEEehhhheeccccHHHHHHHH
Confidence 99999998886 678999999888855
No 62
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=86.92 E-value=1.6 Score=45.18 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=38.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccc---------c-------CCCCchhhh
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-------SKKGYHKQS 424 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~---------i-------~~~~~~khs 424 (573)
.|+--|+.+|..|...|. + + ..++++||+|||||.. + ....|..+|
T Consensus 78 ~HSl~Va~iar~ia~~l~----l-----------~---~~l~~~a~LlHDiGh~PFgH~~E~~l~~~~~~~ggf~Hn~~s 139 (376)
T 2dqb_A 78 THTLEVAQVSRSIARALG----L-----------N---EDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQA 139 (376)
T ss_dssp HHHHHHHHHHHHHHHHTT----C-----------C---HHHHHHHHHHTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------C---HHHHHHHHHHHhcCCCccccchHHHHHHHhhccCCCcHHHHH
Confidence 699999999998765442 2 2 2689999999999975 1 224677777
Q ss_pred HHHHHc
Q 008237 425 CHIIMN 430 (573)
Q Consensus 425 ~yiI~n 430 (573)
+.++..
T Consensus 140 ~ril~~ 145 (376)
T 2dqb_A 140 LRILTH 145 (376)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 777765
No 63
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=86.15 E-value=1.2 Score=44.34 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i 415 (573)
.|+..|+.+|..+-.. .+ ..+...+..|++|||||+.+
T Consensus 127 ~hs~~va~~a~~la~~----~~-------------~~~~e~a~~aGLLHDIGkl~ 164 (297)
T 1vqr_A 127 KTCNEEATFIANWLND----ED-------------KKLSHLLVPCAMLLRLGIVI 164 (297)
T ss_dssp HHHHHHHHHHHHHHTT----TC-------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh----cc-------------CCCHHHHHHHHHHHHccHHH
Confidence 5788888888865322 11 12235688999999999876
No 64
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=84.78 E-value=6.8 Score=39.16 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=80.2
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
+++..||||..++++.+++. +|. ++.+.+.++ ..+ .++.++.+.+.++++. +.+.+ .-..+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~--~G~--i~~~~~~~~-------~~~--~~~~~~~i~~~i~~~~---~~~~i---~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE--EGR--ILSTFKVAT-------PPT--AEGIVDAICAAVAGAS---EGHDV---EAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--BCCCEEEEC-------CSS--HHHHHHHHHHHHHHHH---TTCCE---EEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCC--EEEEEEeeC-------CCC--HHHHHHHHHHHHHHHH---hhcCc---eEEEE
Confidence 36789999999999999965 343 333333333 111 2444555555555553 22222 22445
Q ss_pred Eehhhhh--------cCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 008237 93 ATAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (573)
Q Consensus 93 ATsA~R~--------A~N----~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStEl~ 158 (573)
+....=+ +.| .-.+.+.+++++|++|.+.+.-.=+-+.-. |... ..++.+++-+|.| +-..
T Consensus 63 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 137 (321)
T 3vgl_A 63 GAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQ----GHDDVICITLGTG-LGGG 137 (321)
T ss_dssp EESSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEEE
T ss_pred eccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHHhCCCC----CCCCEEEEEeCcc-eEEE
Confidence 5544422 222 245678899999999999987666555432 2211 2345899999998 7777
Q ss_pred EeeCCeEEE
Q 008237 159 IGKRGKVVF 167 (573)
Q Consensus 159 ~~~~~~~~~ 167 (573)
++-+|++..
T Consensus 138 ii~~G~l~~ 146 (321)
T 3vgl_A 138 IIIGNKLRR 146 (321)
T ss_dssp EEETTEECC
T ss_pred EEECCEEec
Confidence 777888764
No 65
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=84.49 E-value=17 Score=37.85 Aligned_cols=135 Identities=14% Similarity=0.085 Sum_probs=83.2
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEE-
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~- 91 (573)
.++..||||..++++.+++.. |. ++.+.+.++. . .+ .++.++.+.++++.|.+ +.+++..++..
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~--G~--il~~~~~~~~--~----~~--~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 172 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELG--GE--VLIDTKIDIH--E----ID--QDDVLARLLFEIEEFFQ---TYAAQLDRVTSI 172 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETT--SC--EEEEEEEECC--C----CB--HHHHHHHHHHHHHHHHH---HTTTTCCEEEEE
T ss_pred CEEEEEEECCCEEEEEEECCC--CC--EEEEEEEcCC--C----CC--HHHHHHHHHHHHHHHHH---hcCCCcCceEEE
Confidence 467899999999999999763 43 3444433321 1 11 35566777777766644 45554334543
Q ss_pred -EEehhhhh--------cCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceE
Q 008237 92 -VATAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (573)
Q Consensus 92 -vATsA~R~--------A~N----~~~fl~~i~~~tG~~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGStE 156 (573)
||....=+ +.| .-.+.+.+++++|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +-
T Consensus 173 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 247 (429)
T 1z05_A 173 AITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQ----DVDNSVLISIHHG-LG 247 (429)
T ss_dssp EEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc-EE
Confidence 44444322 222 13677888899999999988766555542 23221 2245899999988 55
Q ss_pred EEEeeCCeEEE
Q 008237 157 FVIGKRGKVVF 167 (573)
Q Consensus 157 l~~~~~~~~~~ 167 (573)
..++-+|++..
T Consensus 248 ~giv~~G~l~~ 258 (429)
T 1z05_A 248 AGIVLDGRVLQ 258 (429)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEee
Confidence 66667777653
No 66
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=83.76 E-value=3.8 Score=44.19 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=46.1
Q ss_pred cccCCCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcC
Q 008237 7 YMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHN 83 (573)
Q Consensus 7 ~~~~~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e~-i~r~~~~L~~f~~~~~~~~ 83 (573)
|..|..+++.+||+|+.|+|..+++. +|. ++...+.++.. .....|. -.++. .+.++++++ +++++.+
T Consensus 20 ~~~MM~~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~---~~~~~~~ 90 (520)
T 4e1j_A 20 FQSMMGGYILAIDQGTTSTRAIVFDG--NQK--IAGVGQKEFKQ--HFPKSGWVEHDPEEIWQTVVSTVK---EAIEKSG 90 (520)
T ss_dssp CCCCCSCEEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHTTT
T ss_pred HHHHhhCeEEEEEeCCcceEEEEECC--CCC--EEEEEEEeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHhcC
Confidence 33333468899999999999999974 454 34443333321 1111222 23333 344444444 4455667
Q ss_pred CCcccEEEEEehhh
Q 008237 84 ISRDHTRAVATAAV 97 (573)
Q Consensus 84 v~~~~i~~vATsA~ 97 (573)
++..+|.+|+-++-
T Consensus 91 ~~~~~I~~Igis~~ 104 (520)
T 4e1j_A 91 ITANDIAAIGITNQ 104 (520)
T ss_dssp CCGGGEEEEEEEEC
T ss_pred CCcccEEEEEEeCC
Confidence 76667888775443
No 67
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=83.24 E-value=8.9 Score=38.29 Aligned_cols=134 Identities=13% Similarity=0.120 Sum_probs=83.8
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
.++..||||.+++++.+++. +|. ++.+.+.++.-..+ .++.++...+.++++.+ ....+. -..+
T Consensus 19 ~~~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~~~~~-------~~~~~~~i~~~i~~~~~--~~~~i~---gigi 82 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTP--EGE--IQNATRFMTADWVN-------GIGFVESMKLEIGNFLK--QYPIVK---GVGI 82 (321)
T ss_dssp CCEEEEECCSSEEEEEEECT--TCC--EEEEEEEEHHHHHT-------TTCHHHHHHHHHHHHHH--HCTTCC---EEEE
T ss_pred cEEEEEEECCCEEEEEEEcC--CCc--EEEEEEEeCCCCCC-------HHHHHHHHHHHHHHHHh--ccCCee---EEEE
Confidence 46789999999999999965 344 45444444321111 23456666666666654 223332 3456
Q ss_pred Eehhhhh--------cCC-----hHHHHHHHHHHc-CCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceE
Q 008237 93 ATAAVRA--------AEN-----KDEFVECVREKV-GFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (573)
Q Consensus 93 ATsA~R~--------A~N-----~~~fl~~i~~~t-G~~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGStE 156 (573)
|....-+ +.| .-.+.+.+++++ |++|.|.+.-.=+-+.- +|... ..++.+++-+|.| +-
T Consensus 83 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 157 (321)
T 3r8e_A 83 GWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENK----RMQTFILLALGTG-VG 157 (321)
T ss_dssp EESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCC----CCCcEEEEEECCc-eE
Confidence 6655433 222 245678889999 99999988766555542 23221 2345899999998 66
Q ss_pred EEEeeCCeEEE
Q 008237 157 FVIGKRGKVVF 167 (573)
Q Consensus 157 l~~~~~~~~~~ 167 (573)
..++-+|++..
T Consensus 158 ~gii~~G~l~~ 168 (321)
T 3r8e_A 158 SGVMMNGKLFI 168 (321)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 66777888764
No 68
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=83.22 E-value=14 Score=38.17 Aligned_cols=135 Identities=12% Similarity=0.070 Sum_probs=81.3
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEE-
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~- 91 (573)
.++..||||.+++++.+++.. |. ++.+.+.++ . .. + .++.++...++++.|.+ +.+++..++..
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~~--G~--il~~~~~~~--~---~~-~--~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 149 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDLS--SK--LVVEESQEL--A---LK-D--DLPLLDRIISHIDQFFI---RHQKKLERLTSI 149 (406)
T ss_dssp CEEEEEEEETTEEEEEEEETT--CC--EEEEEEEEC--C---SS-C--SSCHHHHHHHHHHHHHH---HTGGGCCCEEEE
T ss_pred cEEEEEEEcCCEEEEEEEcCC--CC--EEEEEEecC--C---CC-C--HHHHHHHHHHHHHHHHH---hcCCCcCceeEE
Confidence 467899999999999999863 43 344444333 1 11 1 23456667777776654 33433234443
Q ss_pred -EEehhh--------hhcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCce
Q 008237 92 -VATAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGST 155 (573)
Q Consensus 92 -vATsA~--------R~A~N~-----~~fl~~i~~~tG~~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGSt 155 (573)
||.... ..+.|- -.+.+.+++++|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +
T Consensus 150 gi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-i 224 (406)
T 1z6r_A 150 AITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASR----GARDVIQVVIDHN-V 224 (406)
T ss_dssp EEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-E
T ss_pred EEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhcCCC----CCCcEEEEEECCc-E
Confidence 444443 122332 3567888999999999987655444432 22211 2345899999988 5
Q ss_pred EEEEeeCCeEEE
Q 008237 156 EFVIGKRGKVVF 167 (573)
Q Consensus 156 El~~~~~~~~~~ 167 (573)
-..++-+|++..
T Consensus 225 G~giv~~G~l~~ 236 (406)
T 1z6r_A 225 GAGVITDGHLLH 236 (406)
T ss_dssp EEEEEETTEETT
T ss_pred EEEEEECCEEee
Confidence 566667777653
No 69
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=81.82 E-value=3.6 Score=44.44 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=46.9
Q ss_pred CCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHHH-HHHHHHHHHHHHHHHHcCCCccc
Q 008237 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQSQ-ARSVESLLMFRDIIQSHNISRDH 88 (573)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e~i-~r~~~~L~~f~~~~~~~~v~~~~ 88 (573)
++++.+||+||.|+|.++++ .+|+. +.....+...- ....|. -+++.+ +.+++++ ++.+++.++++.+
T Consensus 3 kkYvlgID~GTss~Ka~l~d--~~G~~--va~~~~~~~~~--~p~~G~~Eqdp~~~w~~~~~~i---~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMD--HDANI--ISVSQREFEQI--YPKPGWVEHDPMEIWATQSSTL---VEVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEEC--TTCCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHH---HHHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEc--CCCCE--EEEEEEecCcc--cCCCCcEEECHHHHHHHHHHHH---HHHHHHcCCChhh
Confidence 57889999999999999986 35653 33333332221 112232 245444 3344444 4555666888788
Q ss_pred EEEEEehhhh
Q 008237 89 TRAVATAAVR 98 (573)
Q Consensus 89 i~~vATsA~R 98 (573)
|.+|+-++.|
T Consensus 74 I~aIgis~q~ 83 (526)
T 3ezw_A 74 IAAIGITNQR 83 (526)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEeCCC
Confidence 9998854443
No 70
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=80.55 E-value=49 Score=33.05 Aligned_cols=149 Identities=13% Similarity=0.148 Sum_probs=83.2
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHH-HHHHHHHHHcCCCcccEEEEE
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESL-LMFRDIIQSHNISRDHTRAVA 93 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L-~~f~~~~~~~~v~~~~i~~vA 93 (573)
+-.||.++......+++ +++ ++....+ ++-. ...|..+.++-..-.+.| .-..+.+++.|++..++.+||
T Consensus 3 iLgIdts~~~~~val~~---~g~--i~~~~~~--~~~~--~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia 73 (330)
T 2ivn_A 3 ALGIEGTAHTLGIGIVS---EDK--VLANVFD--TLTT--EKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIA 73 (330)
T ss_dssp EEEEECSSSEEEEEEEC---SSC--EEEEEEE--ECCC--TTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEE
T ss_pred EEEEEccCCCeEEEEEE---CCE--EEEEEEE--Eeec--ccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 67899999999988884 343 4433222 2211 112444333333333333 345566677677665666666
Q ss_pred eh-------hhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008237 94 TA-------AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (573)
Q Consensus 94 Ts-------A~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (573)
.+ ++|.. -.|.+.+....++++.-++-- +|... ++.. .+. +.+ +++.+.||.|+++..+++++.
T Consensus 74 ~~~GPG~~~~lrvg---~~~ak~la~~~~~pl~~v~h~-~aHa~--~a~~-~~~-~~~-~~l~v~GG~t~~i~~~~~~~~ 144 (330)
T 2ivn_A 74 FSQGPGLGPALRVV---ATAARALAVKYRKPIVGVNHC-IAHVE--ITKM-FGV-KDP-VGLYVSGGNTQVLALEGGRYR 144 (330)
T ss_dssp EEEESSCHHHHHHH---HHHHHHHHHHTTCCEEEEEHH-HHHHH--GGGG-GTC-CSC-EEEEECSSCEEEEEEETTEEE
T ss_pred EECCCCchHHHHHH---HHHHHHHHHHcCCCEEeeCcH-HHHHH--HHhh-cCC-CCC-eEEEEcCCCceEEEEcCCeEE
Confidence 42 34542 356666667788888877653 44321 2211 122 222 667777789999988887765
Q ss_pred EE-EEEehhHHHHHHh
Q 008237 167 FC-ESVNLGHVSLSEK 181 (573)
Q Consensus 167 ~~-~SlplG~vrl~e~ 181 (573)
.. .+++-++=++.+.
T Consensus 145 ~lg~t~dds~Gr~fD~ 160 (330)
T 2ivn_A 145 VFGETLDIGIGNAIDV 160 (330)
T ss_dssp EEEEBSSSCHHHHHHH
T ss_pred EEEeecCchhHHHHHH
Confidence 32 3455444444443
No 71
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=80.07 E-value=20 Score=35.87 Aligned_cols=133 Identities=11% Similarity=0.073 Sum_probs=77.2
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
++..||||.+.+++.+++. +|. ++.+.+.++. . -+ ++.++.+.+.++++.. .++.. .-..+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~-------~~~~~~~~~i~~~i~~~~~---~~~~~--~gigi 86 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE--KLE--RVATERVPTP--T-------DDYPLLLETIAGLVAKYDQ---EFACE--GKIGL 86 (327)
T ss_dssp CEEEEEECSSEEEEEEECT--TCC--EEEEEEEECC--T-------TCHHHHHHHHHHHHHHHHH---HHTSC--CEEEE
T ss_pred EEEEEEECCCEEEEEEEeC--CCc--EEEEEEecCC--C-------CCHHHHHHHHHHHHHHHHH---hcCCc--cEEEE
Confidence 5789999999999999965 344 4444444321 0 12 3334444444444433 23321 23456
Q ss_pred EehhhhhcC------------ChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEe
Q 008237 93 ATAAVRAAE------------NKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG 160 (573)
Q Consensus 93 ATsA~R~A~------------N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~ 160 (573)
|....-+.+ +.-.+.+.+++++|++|.|.+.-.=+-+.-.-.-.. ...++.+++-+|.| +-..++
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~~--~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 87 GLPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEEL--QDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp EESEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTTT--TTCSEEEEEEESSS-EEEEEE
T ss_pred EeeccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhCCC--CCCCcEEEEEeCcc-ceEEEE
Confidence 655543322 223567889999999999988765554443211011 12345788999988 555666
Q ss_pred eCCeEEE
Q 008237 161 KRGKVVF 167 (573)
Q Consensus 161 ~~~~~~~ 167 (573)
-+|++..
T Consensus 164 ~~G~l~~ 170 (327)
T 4db3_A 164 YEGKVFS 170 (327)
T ss_dssp ETTEECC
T ss_pred ECCEEee
Confidence 6787653
No 72
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=79.55 E-value=6.5 Score=38.83 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i 415 (573)
.|+..|+.+|..| ++..+.. +..-+..|++|||||+.+
T Consensus 111 ~hs~~~A~~a~~l----a~~~~~~-------------~~~~~~~agLLhdiGkl~ 148 (288)
T 3ljx_A 111 QKSLARAVALQSI----TAQASTV-------------APKEAFTLGLLADVGRLA 148 (288)
T ss_dssp HHHHHHHHHHHHH----HHTSSSS-------------CHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHH----HHHCCCC-------------CHHHHHHHHHHHhccHHH
Confidence 5888888888864 4443321 134578999999999865
No 73
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=79.35 E-value=6 Score=40.82 Aligned_cols=140 Identities=16% Similarity=0.116 Sum_probs=76.4
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeecc--CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGR--DLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~--~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (573)
.+.+||||+.++++.+++. + +++.+.+.++.-.. + .+ .+ -+.++.+++.+..+. ++++++..++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~---~--~il~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~i~~~l---~~~~~~~~~i~g 70 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFED---E--RMVKMQNFSHSPDELGR-FQ--KI-LDQLEFREKIARQFV---EETGYSLSSFSA 70 (381)
T ss_dssp EEEEEEECSSEEEEEEEET---T--EEEEEEEEECCHHHHHT-CS--SG-GGGHHHHHHHHHHHH---HTTTCCGGGCSE
T ss_pred eEEEEECCccceeEEEEec---c--hheeeeecccCcccccc-hh--hH-HHHHHHHHHHHHHHH---HHcCCCccCceE
Confidence 5789999999999999972 2 56665554432110 1 00 11 122333355555543 344443222222
Q ss_pred -EEe--------hhh-----------------hhcCCh-HHHHHHHHHHcCCcEEEeChHH------HHHHHH-------
Q 008237 92 -VAT--------AAV-----------------RAAENK-DEFVECVREKVGFEVDVLTGEQ------EAKFVY------- 131 (573)
Q Consensus 92 -vAT--------sA~-----------------R~A~N~-~~fl~~i~~~tG~~i~VIsg~e------EA~l~~------- 131 (573)
++. -.+ ..+.|- -.+.+.+++++|+++-|.+.-. +|+...
T Consensus 71 Ii~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan~~~~~~~a~aaalp~~~r~ 150 (381)
T 1saz_A 71 FVSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVVVDEMEDVARVSGHPNYQRK 150 (381)
T ss_dssp EEEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTTBCCCCGGGTBCSSTTCBCC
T ss_pred EEecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCccccCcHHHHHcCCcchhhh
Confidence 442 122 234442 3455667889999998877654 332222
Q ss_pred ----------------hhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEE
Q 008237 132 ----------------MGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFC 168 (573)
Q Consensus 132 ----------------~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~ 168 (573)
.|... +..+.+.+++-+|.|. -.....+|++...
T Consensus 151 ~gfhgls~~~~aE~~~~g~~~--~~~~~~~v~~~lGtGi-G~g~i~~G~~~~G 200 (381)
T 1saz_A 151 SIFHALNQKTVAKEVARMMNK--RYEEMNLVVAHMGGGI-SIAAHRKGRVIDV 200 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHTTC--CGGGCEEEEEEESSSE-EEEEEETTEEEEE
T ss_pred cccccccHHHHHHHHHHhcCC--CCccCCEEEEEeCCCc-EEEEEECCEEEEe
Confidence 22211 1122268999999987 5555667887655
No 74
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=79.23 E-value=23 Score=34.66 Aligned_cols=128 Identities=13% Similarity=0.087 Sum_probs=76.7
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCcccEEEEE
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (573)
+..||+|..+++..+++ + | +++.+.+.+.. ... ..+ ++.+++..++++..... ....+ .-..++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~--g--~il~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~~~~-~~~~i---~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E--G--KSLGRFQTSGI---NPF---QQDRNEIDTALRSEVLPAIGQ-KASSI---RAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T--T--EEEEEEEEECC---CTT---TSCHHHHHHHHTTTTHHHHTT-STTTC---CEEEEE
T ss_pred EEEEEeCccceEEEEEe-C--C--eEEEEEECCCC---Ccc---cCCHHHHHHHHHHHHHHHhCC-Ccccc---cEEEEE
Confidence 56899999999999997 4 4 34544432210 110 112 34455555555433210 00112 235677
Q ss_pred ehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008237 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (573)
Q Consensus 94 TsA~R~A~N~~~fl~~i~~~tG~--~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (573)
+...- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||--..+..+|++.
T Consensus 67 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g--~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 67 GAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------G--DSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp ETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------T--TSCEEEEEESSSEEEEEECSSSEEE
T ss_pred CCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------C--CCCcEEEEecCChheEEECCCCcEE
Confidence 77764 45566788889999995 9999887766555431 2 2447777799999655555577764
No 75
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=78.12 E-value=9.1 Score=42.25 Aligned_cols=95 Identities=16% Similarity=0.239 Sum_probs=64.9
Q ss_pred HcCCCcc---cEEEEEehhh-hhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceE
Q 008237 81 SHNISRD---HTRAVATAAV-RAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTE 156 (573)
Q Consensus 81 ~~~v~~~---~i~~vATsA~-R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStE 156 (573)
..++.+. +..++-|.+. --..|++...+-+.+..|++-=.+ -+++-++.+|.- + ...++|||+|+|.|.
T Consensus 211 ~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl--~~qavlAlyasG--l---~ttGLVVDiG~g~T~ 283 (655)
T 4am6_A 211 TLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAI--IQESLATCYGAG--I---STSTCVVNIGAAETR 283 (655)
T ss_dssp SCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEE--EEHHHHHHHHSC--C---SSCEEEEEECSSCEE
T ss_pred cccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeee--ccHHHHHHHhCC--C---CCceEEEcCCCceEE
Confidence 3567653 3455655543 334566778888888888874444 246766666532 1 134899999999999
Q ss_pred EEEeeCCeEEE--EEEEehhHHHHHHhh
Q 008237 157 FVIGKRGKVVF--CESVNLGHVSLSEKF 182 (573)
Q Consensus 157 l~~~~~~~~~~--~~SlplG~vrl~e~f 182 (573)
++-+.+|.++. ...+++|.-.+++.+
T Consensus 284 VvPV~eG~vl~~ai~rL~iGG~dLT~yL 311 (655)
T 4am6_A 284 IACVDEGTVLEHSAITLDYGGDDITRLF 311 (655)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EEEEeCCEEEhhheeeecchHHHHHHHH
Confidence 99998887763 357999998888754
No 76
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=77.01 E-value=4.4 Score=39.81 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccC
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS 416 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~ 416 (573)
.|+..|+.+|..|-..+ ++ + ..-+..|++|||||..+-
T Consensus 108 ~hs~~~a~~a~~la~~~----~~-----------~---~~~~~~agLLhdiGkl~l 145 (275)
T 3m1t_A 108 GNTFEVAIICQELAKRL----GT-----------L---PEEAFTCGILHSIGELLI 145 (275)
T ss_dssp HHHHHHHHHHHHHHHHH----TS-----------C---HHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----CC-----------C---HHHHHHHHHHHHccHHHH
Confidence 58888888888754333 32 1 235789999999998763
No 77
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=76.15 E-value=39 Score=33.38 Aligned_cols=133 Identities=11% Similarity=0.107 Sum_probs=79.5
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
.++..||||.+.+++.+++. +|. ++.+.+.++. . .+ .++.++.+.+.++++.. ..+. ..-.++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~--~g~--il~~~~~~~~--~----~~--~~~~~~~i~~~i~~~~~---~~~~--i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS--TRR--LQWEKRVPTP--H----TS--YSAFLDAVCELVEEADQ---RFGV--KGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECC--C----SC--HHHHHHHHHHHHHHHHH---HHTS--CCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC--CCC--EEEEEEecCC--C----CC--HHHHHHHHHHHHHHHHH---hcCC--ccEEEE
Confidence 46789999999999999975 343 3444433321 1 00 24455555555555443 2221 123567
Q ss_pred EehhhhhcC-------C-----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 008237 93 ATAAVRAAE-------N-----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (573)
Q Consensus 93 ATsA~R~A~-------N-----~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStEl~ 158 (573)
|....-+.. | .-.+.+.+++++|++|.|.+.-.=|-+.-. |... ..++.+++-+|.| +-..
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~~~g~~~----~~~~~v~l~~GtG-iG~g 161 (327)
T 2ap1_A 87 GIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT----QYPLVMGLILGTG-VGGG 161 (327)
T ss_dssp EESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTSTTGG----GCSEEEEEEESSS-EEEE
T ss_pred EeeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHHHhCcCC----CCCcEEEEEECCc-EEEE
Confidence 766653321 2 124567888889999999887766655432 2211 1245788999988 5566
Q ss_pred EeeCCeEEE
Q 008237 159 IGKRGKVVF 167 (573)
Q Consensus 159 ~~~~~~~~~ 167 (573)
+.-+|++..
T Consensus 162 iv~~G~l~~ 170 (327)
T 2ap1_A 162 LVLNGKPIT 170 (327)
T ss_dssp EEETTEEEC
T ss_pred EEECCEEee
Confidence 677787764
No 78
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=75.91 E-value=3 Score=44.25 Aligned_cols=46 Identities=17% Similarity=0.315 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHHHHHHHhc-cc-ccchhhhhhcccCcch-HHHHHHHHHHhhccc
Q 008237 361 KAGAQCASIAKDIFEGLRKC-DK-LYNNQVKLIASFEDKD-LEYLEAACLLHNIGH 413 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~-~~-l~~~~~~~~~~~~~~~-r~lL~~Aa~LhdiG~ 413 (573)
.|+--|+.+|..+...|... .. ++. ..++.+ +.++++||++||||.
T Consensus 65 ~Hsl~v~~ia~~~~~~l~~~~~~~~~~-------~~~~~~~~~~v~~a~L~HDiGH 113 (451)
T 2pgs_A 65 THSLEVSCVGRSLGMRVGETLRAALPD-------WCDPSDLGMVVQSACLAHDIGN 113 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGSCT-------TCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccc-------ccchhHHHHHHHHHHHhhccCC
Confidence 79999999999988888742 11 110 122222 359999999999995
No 79
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=75.71 E-value=6.7 Score=42.46 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=43.3
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeee--ec-----cCCCc--CC--CCCH-HHHHHHHHHHHHHHHHHH
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVI--LG-----RDLSS--SC--SIST-QSQARSVESLLMFRDIIQ 80 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vr--Lg-----~~~~~--~g--~ls~-e~i~r~~~~L~~f~~~~~ 80 (573)
+++..||+||.|+|.++++. +|+. +.....+.. .- .|... .| +-++ +-...++.++.+ .+.
T Consensus 10 ~~~lgID~GTts~Ka~l~d~--~G~v--v~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~---~l~ 82 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDA--ELNV--FYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE---KMK 82 (538)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCCE--EEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH---HHH
T ss_pred CEEEEEEEcCcCEEEEEECC--CCCE--EEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH---HHH
Confidence 58999999999999999973 5653 433333321 11 12111 01 1123 344555554433 334
Q ss_pred HcCCCcccEEEEEehh
Q 008237 81 SHNISRDHTRAVATAA 96 (573)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (573)
+.+++..+|.+|+-++
T Consensus 83 ~~~~~~~~I~aIgis~ 98 (538)
T 4bc3_A 83 ASGFDFSQVLALSGAG 98 (538)
T ss_dssp HTTCCGGGEEEEEEEE
T ss_pred HcCCChHHeEEEEecc
Confidence 5677667898887444
No 80
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=75.62 E-value=5.3 Score=42.96 Aligned_cols=74 Identities=9% Similarity=0.033 Sum_probs=42.9
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCC--CCCHHHH-HHHHHHHHHHHHHHHHcCCCcccE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSC--SISTQSQ-ARSVESLLMFRDIIQSHNISRDHT 89 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g--~ls~e~i-~r~~~~L~~f~~~~~~~~v~~~~i 89 (573)
+++.+||+|+.|+|..+++. +|+ ++...+.+..+- ....| .-.++.+ +.+++++++. + +.+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~~---~-~~~~~~~~I 74 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADR--DGG--LHFQRSIALETY--GDGNGPVEQDAGDWYDAVQRIASSW---W-QSGVDARRV 74 (511)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--STTSSCCEECHHHHHHHHHHHHHHH---H-TTTCCGGGE
T ss_pred cEEEEEEeCCCceEEEEECC--CCC--EEEEEEeeccee--cCCCCCEEECHHHHHHHHHHHHHHH---H-hcCCChhHe
Confidence 47899999999999999974 454 344333333221 11222 2244443 3344555443 3 556666678
Q ss_pred EEEEehh
Q 008237 90 RAVATAA 96 (573)
Q Consensus 90 ~~vATsA 96 (573)
.+|+-++
T Consensus 75 ~~Igis~ 81 (511)
T 3hz6_A 75 SAIVLSG 81 (511)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8887544
No 81
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=75.27 E-value=37 Score=33.86 Aligned_cols=134 Identities=10% Similarity=0.023 Sum_probs=80.0
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE--
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (573)
.++..||||.+++++.+++. +|. ++.+.+.+.. . -.++.++...+.++++.+.... +..++.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~---~~~~~~~~i~~~i~~~~~~~~~---~~~~i~gi 93 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM--KGE--IVKKYTQFNP------K---TYEERINLILQMCVEAAAEAVK---LNCRILGV 93 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECC------S---SHHHHHHHHHHHHHHHHHHHHH---TTEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCc--EEEEEEEcCC------C---CHHHHHHHHHHHHHHHHHhccc---ccCceEEE
Confidence 46688999999999999975 354 3443333321 1 0245567777777776543321 112343
Q ss_pred EEEehhh--------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCc
Q 008237 91 AVATAAV--------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGS 154 (573)
Q Consensus 91 ~vATsA~--------R~A~N~------~~fl~~i~~~tG~~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGS 154 (573)
+++.... ..+.|- -.+.+.+++++|++|.|.+.-.=|-+.-. |... ..++.+++-+|.|
T Consensus 94 gi~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~v~i~~GtG- 168 (343)
T 2yhw_A 94 GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGK----GLENFVTLITGTG- 168 (343)
T ss_dssp EEEESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHHTSTTT----TCSCEEEEEESSS-
T ss_pred EEecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCC-
Confidence 4444443 223332 24567888899999999876665555432 2211 2245899999988
Q ss_pred eEEEEeeCCeEEE
Q 008237 155 TEFVIGKRGKVVF 167 (573)
Q Consensus 155 tEl~~~~~~~~~~ 167 (573)
+-..+.-+|++..
T Consensus 169 iG~gii~~G~l~~ 181 (343)
T 2yhw_A 169 IGGGIIHQHELIH 181 (343)
T ss_dssp EEEEEEETTEECC
T ss_pred EEEEEEECCEEec
Confidence 5566677777654
No 82
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=75.21 E-value=5.9 Score=42.54 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=43.8
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHcCCCcccE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (573)
+++..||+|+.|+|..+++ .+|+ ++.+.+.+...- ....|. -+++ -.+.+++++++. +++.+++..+|
T Consensus 7 ~~~lgIDiGtts~k~~l~d--~~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~i~~~i~~~---~~~~~~~~~~I 77 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVR--LPDT--VVAVASRPTTLS--SPHPGWAEEDPAQWWDNARAVLAEL---KTTAGESDWRP 77 (508)
T ss_dssp CEEEEEEECSSEEEEEEEE--TTTE--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHH---HHHHCGGGCCE
T ss_pred CEEEEEEecCcceEEEEEC--CCCC--EEEEEEEeccee--cCCCCceEECHHHHHHHHHHHHHHH---HHhcCCChhhe
Confidence 5788999999999999997 3553 454444443221 111221 2333 344455555554 44446655568
Q ss_pred EEEEehhh
Q 008237 90 RAVATAAV 97 (573)
Q Consensus 90 ~~vATsA~ 97 (573)
.+|+-++-
T Consensus 78 ~~Igis~~ 85 (508)
T 3ifr_A 78 GGICVTGM 85 (508)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
Confidence 77775443
No 83
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=75.16 E-value=9 Score=40.98 Aligned_cols=74 Identities=14% Similarity=0.251 Sum_probs=43.1
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCcccE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (573)
+++..||+|+.|+|..+++. +|+. +.+.+.+... .....|. -.++. .+.++++++ +++++.+++..+|
T Consensus 6 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~---~~~~~~~~~~~~I 76 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ--KGEI--AGVAQREFKQ--YFPQSGWVEHDANEIWTSVLAVMT---EVINENDVRADQI 76 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHTTTCCGGGE
T ss_pred cEEEEEEeCccceEEEEEcC--CCCE--EEEEEeeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHhcCCCcccE
Confidence 47899999999999999974 4543 4333333321 1112222 23333 344445554 4455667766678
Q ss_pred EEEEeh
Q 008237 90 RAVATA 95 (573)
Q Consensus 90 ~~vATs 95 (573)
.+|+-+
T Consensus 77 ~~Igis 82 (501)
T 3g25_A 77 AGIGIT 82 (501)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887754
No 84
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=75.10 E-value=37 Score=33.49 Aligned_cols=127 Identities=16% Similarity=0.223 Sum_probs=75.4
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
+++..||||..++++.+++. +|. ++.+.+.++. + .++.+++.. +.++++.+. -..+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~t~-------~---~~~~l~~i~-------~~~~~~~i~---gigi 58 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE--DGT--IIDRIEFPTX-------M---PDETIEXVI-------QYFSQFSLQ---AIGI 58 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT--TSC--EEEEEEEECC-------C---HHHHHHHHH-------HHHTTSCCS---EEEE
T ss_pred cEEEEEEECcceeEEEEEEC--CCc--EEEEEEecCC-------C---hHHHHHHHH-------HHhccCCce---EEEE
Confidence 46889999999999999964 454 4544444431 0 123333322 233334442 3455
Q ss_pred Eehhh-------------hhcCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCC
Q 008237 93 ATAAV-------------RAAEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGG 153 (573)
Q Consensus 93 ATsA~-------------R~A~N----~~~fl~~i~~~tG~~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGG 153 (573)
|+... ..+.| .-.+.+.+++++|++|.+.+.-.=|-+.- +|... ..++.+++-+|.|
T Consensus 59 ~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~~~----~~~~~~~l~~GtG 134 (302)
T 3epq_A 59 GSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGEAX----GLDSCLYITIGTG 134 (302)
T ss_dssp EECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS
T ss_pred EeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc
Confidence 55332 22333 24567889999999999988766555442 23221 1245788888876
Q ss_pred ceEEEEeeCCeEEEE
Q 008237 154 STEFVIGKRGKVVFC 168 (573)
Q Consensus 154 StEl~~~~~~~~~~~ 168 (573)
+--.++-+|++...
T Consensus 135 -iG~gii~~G~l~~G 148 (302)
T 3epq_A 135 -IGAGAIVEGRLLQG 148 (302)
T ss_dssp -EEEEEEETTEECCS
T ss_pred -eEEEEEECCEEccc
Confidence 55556668887643
No 85
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=74.77 E-value=10 Score=40.12 Aligned_cols=43 Identities=21% Similarity=0.059 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCC
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK 417 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~ 417 (573)
.|+..|+.+|..|- +..+... ..+...+..|++|||||.-+=.
T Consensus 281 ~hs~~~A~~a~~LA----~~~~~~~----------~~~~~~aflaGLLhDIGkl~l~ 323 (457)
T 3mem_A 281 QQAIWQAQSAGILA----SMMPRGQ----------RPLFGLAYLAGLLHNFGHLVLA 323 (457)
T ss_dssp HHHHHHHHHHHHHH----HHSCGGG----------CCCHHHHHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHHHHHHH----Hhccccc----------CCCHHHHHHHHHHHHhhHHHHH
Confidence 68888888888653 3333210 0123568899999999987743
No 86
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=73.48 E-value=20 Score=35.03 Aligned_cols=114 Identities=14% Similarity=0.130 Sum_probs=67.8
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI-STQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~l-s~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
++..||+|..++++.+++. +|. ++.+.+.+.. ... .. .++.++...+.++++.. .. + ...++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~~~---~~-~---~~igi 65 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC--EGN--FIGEGSSGPG---NYH---NVGLTRAIENIKEAVKIAAK---GE-A---DVVGM 65 (299)
T ss_dssp CEEEEEECSSCEEEEEECT--TSC--EEEEEEESCC---CHH---HHCHHHHHHHHHHHHHHHHT---SC-C---SEEEE
T ss_pred EEEEEEeCCCcEEEEEEcC--CCC--EEEEEeCCCC---Ccc---cCCHHHHHHHHHHHHHHHHh---cC-C---CEEEE
Confidence 4688999999999999965 353 3443332210 000 01 23445555555555432 22 3 25678
Q ss_pred EehhhhhcCCh-HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCc
Q 008237 93 ATAAVRAAENK-DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGS 154 (573)
Q Consensus 93 ATsA~R~A~N~-~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGS 154 (573)
|.... +..++ ..+.+.+++ +|+++.+.+.-.=+.+.- .. .++.+++-+|.|+
T Consensus 66 ~~~G~-~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e---~~-----~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 66 GVAGL-DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAE---TL-----GEPGVVVIAGTGS 118 (299)
T ss_dssp EETTC-CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHH---HT-----TSCEEEEEESSSE
T ss_pred EcCCC-CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhc---cC-----CCCeEEEEecCCE
Confidence 88888 54333 245566777 899998877655444432 21 2458899999996
No 87
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=72.81 E-value=24 Score=34.20 Aligned_cols=130 Identities=13% Similarity=0.129 Sum_probs=75.8
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEe
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (573)
+..||||..++++.+++. +|. ++.+.+.++.- . .+ .++.++.+.+.++++.. + + ....+|.
T Consensus 3 ~lgidiggt~~~~~l~d~--~g~--il~~~~~~~~~----~-~~--~~~~~~~i~~~i~~~~~---~--~---~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGA--DGQ--IRDRRELPTPA----S-QT--PEALRDALSALVSPLQA---H--A---QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECT--TCC--EEEEEEEECCS----S-CC--HHHHHHHHHHHHTTTGG---G--C---SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECC--CCC--EEEEEEecCCC----C-CC--HHHHHHHHHHHHHHHHh---h--C---CEEEEEe
Confidence 678999999999999965 353 45444433211 0 00 23444444444444322 1 2 2356666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 008237 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (573)
Q Consensus 95 sA~R~--------A~N~-----~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 161 (573)
...-+ +.|- -.+.+.+++++|++|.+.+.-.=|-+.-.-. .-.... +.+++-+|.| +-..+..
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~--g~~~~~-~~v~l~~GtG-iG~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQA--LDGDIT-DMVFITVSTG-VGGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHT--SCTTCC-CEEEEEESSS-EEEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHh--CCCCCc-eEEEEEeCcc-EEEEEEE
Confidence 55422 2232 2467888899999999988655554442211 111122 6899999999 5767777
Q ss_pred CCeEEE
Q 008237 162 RGKVVF 167 (573)
Q Consensus 162 ~~~~~~ 167 (573)
+|++..
T Consensus 140 ~G~l~~ 145 (289)
T 2aa4_A 140 GCKLLT 145 (289)
T ss_dssp TTEEEC
T ss_pred CCEEee
Confidence 888764
No 88
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=71.74 E-value=9.9 Score=40.72 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=43.6
Q ss_pred CCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCccc
Q 008237 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDH 88 (573)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~ 88 (573)
++++..||+|+.|+|..+++. +|. ++...+.+...- ....|. -.++. .+.+++++++ ++++.+++..+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~~~~~~ 74 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR--NGK--KIGSSQKEFPQY--FPKSGWVEHNANEIWNSVQSVIAG---AFIESGIRPEA 74 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHHHTCCGGG
T ss_pred CCEEEEEEcCCCceEEEEECC--CCC--EEEEEEEecCcc--CCCCCcEEECHHHHHHHHHHHHHH---HHHHcCCChhh
Confidence 357899999999999999974 454 344433333221 111221 23333 4444455544 44555776667
Q ss_pred EEEEEehh
Q 008237 89 TRAVATAA 96 (573)
Q Consensus 89 i~~vATsA 96 (573)
|.+|+-++
T Consensus 75 I~~Igis~ 82 (506)
T 3h3n_X 75 IAGIGITN 82 (506)
T ss_dssp EEEEEEEE
T ss_pred eEEEEeeC
Confidence 88877543
No 89
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=71.64 E-value=12 Score=40.07 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=44.0
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCcccE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (573)
+++..||+|+.|+|..+++. +|. ++...+.+...- ....|. -.++. .+.++++++ +++++.+++..+|
T Consensus 3 ~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~---~~~~~~~~~~~~I 73 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH--DAN--IISVSQREFEQI--YPKPGWVEHDPMEIWATQSSTLV---EVLAKADISSDQI 73 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHH---HHHHHTTCCGGGE
T ss_pred cEEEEEEcCCcceEEEEECC--CCC--EEEEEEEecccc--cCCCCcEEECHHHHHHHHHHHHH---HHHHHcCCChhhe
Confidence 57889999999999999964 454 344444433221 111222 23433 344444554 4455667776678
Q ss_pred EEEEehh
Q 008237 90 RAVATAA 96 (573)
Q Consensus 90 ~~vATsA 96 (573)
.+|+-++
T Consensus 74 ~~Igis~ 80 (510)
T 2p3r_A 74 AAIGITN 80 (510)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 8887544
No 90
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=71.45 E-value=21 Score=35.34 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=74.9
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE--
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (573)
.++..||||.++++..+++. +|. ++.+.+.++. +. ..++.++.+.+.++++. +.++. ++.
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~~------~~~~~~~~i~~~i~~~~---~~~~~---~i~gi 68 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA--EGE--TLHCEKKRTA--EV------IAPGLVSGIGEMIDEQL---RRFNA---RCHGL 68 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEEHH--HH------HTTCHHHHHHHHHHHHH---HHHTE---EEEEE
T ss_pred CEEEEEEeCCCEEEEEEECC--CCC--EEEEEEecCc--cc------cHHHHHHHHHHHHHHHH---HhcCC---CeeEE
Confidence 46789999999999999975 354 3443333321 10 01223444444444433 33332 233
Q ss_pred EEEehh--------hhhcCCh-------HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 008237 91 AVATAA--------VRAAENK-------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (573)
Q Consensus 91 ~vATsA--------~R~A~N~-------~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGSt 155 (573)
.+|... ++.+.|- -.+.+.+++++|++|.+.+.-.=|-+....- ... ...+.+.+-+|.| .
T Consensus 69 gi~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~~e~~~-~~~--~~~~~~~v~~GtG-i 144 (310)
T 3htv_A 69 VMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVE-NRL--TQQLVLAAYLGTG-M 144 (310)
T ss_dssp EEEESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHH-TTC--TTSCEEEEEESSS-E
T ss_pred EEeccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHHHHHhh-ccc--CCceEEEEEecee-E
Confidence 334322 3445543 2467899999999999988776554432221 112 2345777888875 3
Q ss_pred EEEEeeCCeEEEE
Q 008237 156 EFVIGKRGKVVFC 168 (573)
Q Consensus 156 El~~~~~~~~~~~ 168 (573)
--.++-+|++...
T Consensus 145 G~gii~~G~l~~G 157 (310)
T 3htv_A 145 GFAVWMNGAPWTG 157 (310)
T ss_dssp EEEEEETTEEECC
T ss_pred EEEEEECCEEeec
Confidence 3345567777643
No 91
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=70.29 E-value=2.9 Score=44.17 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHHHHHhc-c-cccchhhhhhcccCcch-HHHHHHHHHHhhccc
Q 008237 361 KAGAQCASIAKDIFEGLRKC-D-KLYNNQVKLIASFEDKD-LEYLEAACLLHNIGH 413 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~-~-~l~~~~~~~~~~~~~~~-r~lL~~Aa~LhdiG~ 413 (573)
.|+--|+.+|..+...|... . ..+. .... ....+++ ..++++||++||||.
T Consensus 67 tHSL~V~~iar~~~~~l~~~l~~~~~~-~~~~-~~~~~~~~~~lv~~a~L~HDiGH 120 (444)
T 3bg2_A 67 THSLEVSVVGRSLGRMVGKKLLEKYPH-LEQV-YGYKFNDFGAIVAAAALAHDIGN 120 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTH-HHHT-TCCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc-cccc-cccchhhHHHHHHHHHHhcccCC
Confidence 68888888888877776431 0 0000 0000 0012222 479999999999995
No 92
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=68.98 E-value=75 Score=31.08 Aligned_cols=132 Identities=13% Similarity=0.049 Sum_probs=78.2
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (573)
++..||||.+++++.+++.. + ++.+.+.++. ... .++.++...+.++.+.+.. ...+. -.++|
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~--~---~l~~~~~~~~------~~~--~~~~~~~i~~~i~~~~~~~-~~~i~---gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK--R---LLSKVVVPTP------KEG--GERVAEALAEAAERAEREA-GVRGE---AIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS--S---BSCCEEEECC------SSC--HHHHHHHHHHHHHHHHHHH-TCCCS---SEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCC--C---cEEEEEEcCC------CCC--hHHHHHHHHHHHHHHHhhc-cCCce---EEEEE
Confidence 46799999999999999743 3 2233333321 111 1566777777777765433 22332 24566
Q ss_pred ehhhh--------hcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 008237 94 TAAVR--------AAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (573)
Q Consensus 94 TsA~R--------~A~N~-----~~fl~~i~~~tG~~i~VIsg~eEA~l~~~--gv~~~~~~~~~~~lviDIGGGStEl~ 158 (573)
....= .+.|- -.+.+.+++++|++|.+.+.-.=|-+.-. |... ..++.+++-+|.| +--.
T Consensus 65 ~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 139 (302)
T 3vov_A 65 TPGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQ----GEESSLYLTVSTG-IGGG 139 (302)
T ss_dssp ESSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS-EEEE
T ss_pred ecccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHHhCCCC----CCCCEEEEEECCc-eeEE
Confidence 54432 23332 34678889999999999887655544432 2211 2245889999988 4445
Q ss_pred EeeCCeEEE
Q 008237 159 IGKRGKVVF 167 (573)
Q Consensus 159 ~~~~~~~~~ 167 (573)
++-+|++..
T Consensus 140 ii~~g~l~~ 148 (302)
T 3vov_A 140 VVLGGRVLR 148 (302)
T ss_dssp EEETTEECC
T ss_pred EEECCEEee
Confidence 556777654
No 93
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=68.26 E-value=14 Score=39.40 Aligned_cols=76 Identities=14% Similarity=0.130 Sum_probs=44.0
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CHH-HHHHHHHHHHHHHHHHHHcCCCcccE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--STQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~l--s~e-~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (573)
+++..||+|+.|+|..+++. +|. ++.+.+.+...- ....|.. .++ -.+.+++++++. +++.+++..+|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~--~g~--~~~~~~~~~~~~--~p~~g~~e~d~~~~~~~~~~~i~~~---~~~~~~~~~~i 73 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR--ESN--IHGIGQYEFPQH--YPRPGWVEHNPEEIWDAQLRAIKDA---IQSARIEPNQI 73 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCCB--CCSTTCCEECHHHHHHHHHHHHHHH---HHHHTCCGGGE
T ss_pred cEEEEEecCCchhEEEEECC--CCC--EEEEEEecccee--cCCCCcEEECHHHHHHHHHHHHHHH---HHhcCCCcccE
Confidence 36889999999999999964 454 454444443221 1122222 233 344555555554 44456665568
Q ss_pred EEEEehhh
Q 008237 90 RAVATAAV 97 (573)
Q Consensus 90 ~~vATsA~ 97 (573)
.+|+-++-
T Consensus 74 ~~Igis~~ 81 (497)
T 2zf5_O 74 AAIGVTNQ 81 (497)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 77775444
No 94
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=67.53 E-value=87 Score=29.84 Aligned_cols=138 Identities=16% Similarity=0.169 Sum_probs=79.1
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEE-eeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcC-CCcccEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTID-TLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHN-ISRDHTR 90 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~-~~k~~vrLg~~~~~~g~ls-~e~i~r~~~~L~~f~~~~~~~~-v~~~~i~ 90 (573)
++..||||.+++++.+++.. ++. ++. +.+.++. . ..+ ++.++...+.++.+.+. .+ .+...-.
T Consensus 13 ~~lgidiggt~i~~~l~dl~-~g~--i~~~~~~~~~~--~------~~~~~~~~~~i~~~i~~~~~~---~~~~~~~~~i 78 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDLK-KGK--LLGERFRVPTP--Q------PATPESVAEAVALVVAELSAR---PEAPAAGSPV 78 (267)
T ss_dssp CEEEEEECSSEEEEEEEETT-TTE--EEEEEEEEECC--S------SCCHHHHHHHHHHHHHHHHTS---TTCCCTTCCE
T ss_pred EEEEEEECCCEEEEEEEECC-CCe--EEEEEEecCCC--c------cCCHHHHHHHHHHHHHHHHHh---ccccCccceE
Confidence 57889999999999999764 242 332 2222221 0 112 34455566666665431 11 1111225
Q ss_pred EEEehhh------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 008237 91 AVATAAV------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (573)
Q Consensus 91 ~vATsA~------R~A~N~------~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~ 158 (573)
+||.... ..+.|- -.+.+.+++++|++|.+.+.-.=|-+.-.-.-.... .+.+.+++-+|.| +-..
T Consensus 79 gi~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~~-~~~~~~~l~~GtG-IG~g 156 (267)
T 1woq_A 79 GVTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAGAG-VKGTVLVITLGTG-IGSA 156 (267)
T ss_dssp EEEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHHHHSTTTT-CCSEEEEEEESSS-EEEE
T ss_pred EEEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHHHhCCCCC-CCCcEEEEEECcc-eEEE
Confidence 5665443 333442 346688899999999998877766665321111111 1123678889987 7777
Q ss_pred EeeCCeEEE
Q 008237 159 IGKRGKVVF 167 (573)
Q Consensus 159 ~~~~~~~~~ 167 (573)
++-+|++..
T Consensus 157 iv~~G~l~~ 165 (267)
T 1woq_A 157 FIFDGKLVP 165 (267)
T ss_dssp EEETTEEET
T ss_pred EEECCEEcc
Confidence 778888764
No 95
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=67.17 E-value=12 Score=40.10 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=39.4
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCC--CCCHHHH-HHHHHHHHHHHHHHHHcCCCcccE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSC--SISTQSQ-ARSVESLLMFRDIIQSHNISRDHT 89 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g--~ls~e~i-~r~~~~L~~f~~~~~~~~v~~~~i 89 (573)
+++..||+|+.|+|..+++. +|. ++...+.+...- ....| .-.++.+ +.+++++++ ++++.+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI--NGK--AVASVSKGYPLI--QTKVGQAEEDPKLIFDAVQEIIFD---LTQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC--CCC--EEEEEEeeccee--cCCCCcEEECHHHHHHHHHHHHHH---HHHhCC---CCe
Confidence 57899999999999999974 454 343333333221 11122 1234433 344455544 344444 357
Q ss_pred EEEEehh
Q 008237 90 RAVATAA 96 (573)
Q Consensus 90 ~~vATsA 96 (573)
.+|+-++
T Consensus 72 ~~Igis~ 78 (504)
T 3ll3_A 72 AAISWSS 78 (504)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 7776443
No 96
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=66.47 E-value=12 Score=40.51 Aligned_cols=74 Identities=14% Similarity=0.245 Sum_probs=43.8
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeee---eccCCCcCCCCCHHH-HHHHHHHHHHHHHHHHHcCCCccc
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVI---LGRDLSSSCSISTQS-QARSVESLLMFRDIIQSHNISRDH 88 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vr---Lg~~~~~~g~ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~ 88 (573)
+++..||+|+.|+|..+++. +|+. +...+.+.. ...|-. .-+++. .+.+++++++. +++.+++..+
T Consensus 5 ~~~lgIDiGtts~ka~l~d~--~G~i--l~~~~~~~~~~~p~~g~~---eqdp~~~~~~~~~~i~~~---~~~~~~~~~~ 74 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDL--QGRM--VGQASREITMFKPKADFV---EQSSENIWQAVCNAVRDA---VNQADINPIQ 74 (554)
T ss_dssp CEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCEEEETTEE---EECHHHHHHHHHHHHHHH---HHHHTCCGGG
T ss_pred cEEEEEEECcccEEEEEECC--CCCE--EEEEEEecccccCCCCcc---ccCHHHHHHHHHHHHHHH---HHHcCCCHhH
Confidence 57899999999999999973 5643 333333321 111211 123333 45555555544 4455776667
Q ss_pred EEEEEehh
Q 008237 89 TRAVATAA 96 (573)
Q Consensus 89 i~~vATsA 96 (573)
|.+|+-++
T Consensus 75 I~~Igis~ 82 (554)
T 3l0q_A 75 VKGLGFDA 82 (554)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 88888655
No 97
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=66.26 E-value=7.7 Score=37.42 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHhhcccccC--------------CCCchhhhHHHHHcCCCCCCCCHHH-HHHHHHHHHHhcCCC
Q 008237 398 DLEYLEAACLLHNIGHFTS--------------KKGYHKQSCHIIMNGDHLYGYSTDE-IKLIALLTRFHRKKF 456 (573)
Q Consensus 398 ~r~lL~~Aa~LhdiG~~i~--------------~~~~~khs~yiI~ns~~l~G~s~~E-~~~iA~ia~~hrk~~ 456 (573)
.+.++.+||+|||+|+.-. ...|.-.|++++...- -.....++ ..++++.+.+|++..
T Consensus 55 ~~~ll~~a~llHDiGKa~~~FQ~k~l~~~~~~~~~~He~lSa~fl~~~l-~~~~~~~~la~lialAI~sHH~~l 127 (244)
T 3m5f_A 55 VDEFMKILIKLHDIGKASKIYQRAIINDQEKLMGFRHELVSAYYTYHIL-LKKFGDKNLAFIGALTVMLHHEPI 127 (244)
T ss_dssp HHHHHHHHHHHTTGGGGBHHHHHHHHCTTSCCSSCCHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHcccccCCHHHHHHHHhccCCCCCCChHHHHHHHHHHHH-hhccchHHHHHHHHHHHHHhCHHH
Confidence 3578999999999998521 2355555666664331 11112233 567777777776654
No 98
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=66.15 E-value=45 Score=32.31 Aligned_cols=124 Identities=14% Similarity=0.081 Sum_probs=74.0
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEe
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (573)
+..||||...+++.+++. +|. ++.+.+.++. .+.+ ..++.+..+. ++..+ .-.++|.
T Consensus 6 ~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~----------~~~~---~~~~~i~~~i---~~~~i---~gigi~~ 62 (292)
T 2gup_A 6 IATIDIGGTGIKFASLTP--DGK--ILDKTSISTP----------ENLE---DLLAWLDQRL---SEQDY---SGIAMSV 62 (292)
T ss_dssp EEEEEEETTEEEEEEECT--TCC--EEEEEEECCC----------SSHH---HHHHHHHHHH---TTSCC---SEEEEEE
T ss_pred EEEEEECCCEEEEEEECC--CCC--EEEEEEEeCC----------CCHH---HHHHHHHHHH---HhCCC---cEEEEEe
Confidence 688999999999999965 353 3444433321 1222 2333333322 22233 2356666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 008237 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (573)
Q Consensus 95 sA~R~--------A~N~-----~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 161 (573)
...-+ +.|- -.+.+.+ +++|++|.+.+.-.=|-+.-.- ... ..++.+++-+|.| +-..+.-
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~--~~~--~~~~~v~l~~GtG-iG~giv~ 136 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL--AHP--ELENAACVVIGTG-IGGAMII 136 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH--HCT--TCSSEEEEEESSS-EEEEEEE
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH--hcC--CCCeEEEEEECCc-eEEEEEE
Confidence 65422 3332 2466778 8899999998877666555432 111 2345899999988 5566777
Q ss_pred CCeEEE
Q 008237 162 RGKVVF 167 (573)
Q Consensus 162 ~~~~~~ 167 (573)
+|++..
T Consensus 137 ~G~l~~ 142 (292)
T 2gup_A 137 NGRLHR 142 (292)
T ss_dssp TTEEEC
T ss_pred CCEEEe
Confidence 887764
No 99
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=63.48 E-value=36 Score=33.15 Aligned_cols=129 Identities=12% Similarity=0.157 Sum_probs=68.7
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEe
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (573)
+-+||||-.++++-+++ ++ +++...+.++. . -+.+.+ ...+.++++.++.+..+|..++=
T Consensus 4 lL~IDIGNT~iK~gl~d---~~--~l~~~~r~~T~-~--------~t~de~------~~~l~~ll~~~~~~~~~I~~iiI 63 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD---GD--EIKLRFRHTSK-V--------STSDEL------GIFLKSVLRENNCSPETIRKIAI 63 (266)
T ss_dssp EEEEEECSSEEEEEEEE---TT--EEEEEEEEECS-C--------CCHHHH------HHHHHHHHHTTTCCGGGCCEEEE
T ss_pred EEEEEECCCeEEEEEEE---CC--EEEEEEEecCC-C--------CCHHHH------HHHHHHHHHHcCCChhhceEEEE
Confidence 67999999999999995 23 45555544432 1 122222 23345566677765444544443
Q ss_pred hhhhhcCChHHHHHHHHHHcCCcEEEeChHHH----------------HHHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 008237 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQE----------------AKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (573)
Q Consensus 95 sA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eE----------------A~l~~~gv~~~~~~~~~~~lviDIGGGStEl~ 158 (573)
+.+.-. -...+...+++..+.++.+++.... --....|+....+ ..+.+|+|.|..-|==.
T Consensus 64 SSVvp~-~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~~--~~~~iVVD~GTA~T~d~ 140 (266)
T 3djc_A 64 CSVVPQ-VDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFP--NQNIIVIDFGTATTFCA 140 (266)
T ss_dssp EESCHH-HHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHST--TSEEEEEEESSEEEEEE
T ss_pred ecchHh-HHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhcC--CCCEEEEECCCeeEEEE
Confidence 333321 1223444455556777777662211 1122223333222 34689999999888333
Q ss_pred EeeCCeEE
Q 008237 159 IGKRGKVV 166 (573)
Q Consensus 159 ~~~~~~~~ 166 (573)
+-.+|...
T Consensus 141 v~~~g~~l 148 (266)
T 3djc_A 141 ISHKKAYL 148 (266)
T ss_dssp ECTTSEEE
T ss_pred EcCCCcEE
Confidence 33445544
No 100
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=61.31 E-value=17 Score=38.71 Aligned_cols=74 Identities=9% Similarity=0.128 Sum_probs=41.3
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CHH-HHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--STQ-SQARSVESLLMFRDIIQSHNISRDHTR 90 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~l--s~e-~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (573)
++..||+|+.|+|..+++. +|. ++.+.+.+...- ....|.. .++ -.+.+++++++. +++.+++..+|.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~~~~~i~ 73 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL--EGR--PVAVAKREFRQL--YPKPGWVEHDPLEIWETTLWAAREV---LRRAGAEAGEVL 73 (495)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCEE--CSSTTCCEECHHHHHHHHHHHHHHH---HHHTTCCGGGCC
T ss_pred EEEEEeeCCcceEEEEECC--CCC--EEEEEEEeecee--cCCCCcEeeCHHHHHHHHHHHHHHH---HHhcCCCcccEE
Confidence 5789999999999999964 454 444444443221 1112221 333 344555555544 445566544566
Q ss_pred EEEehh
Q 008237 91 AVATAA 96 (573)
Q Consensus 91 ~vATsA 96 (573)
+|+-++
T Consensus 74 ~Igis~ 79 (495)
T 2dpn_A 74 ALGITN 79 (495)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 666443
No 101
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=60.62 E-value=11 Score=41.22 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=41.6
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeec---cCCCc------CC--CCCHHHH-HHHHHHHHHHHHHHH
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILG---RDLSS------SC--SISTQSQ-ARSVESLLMFRDIIQ 80 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg---~~~~~------~g--~ls~e~i-~r~~~~L~~f~~~~~ 80 (573)
+++..||+|+.|+|..+++.. +|++ +.+...+...+ ..... .| .-.++.+ +.++++++.. ++
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~-~G~i--~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~---l~ 78 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLS-NGQE--LADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAV---MK 78 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TCCE--EEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHH---HH
T ss_pred CEEEEEecCCcceEEEEEECC-CCeE--EEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHH---HH
Confidence 578899999999999999752 4543 43333332210 00000 11 2244444 5555666554 44
Q ss_pred HcCCCcccEEEEEehh
Q 008237 81 SHNISRDHTRAVATAA 96 (573)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (573)
+.+++..+|.+|+-++
T Consensus 79 ~~~~~~~~I~~Igis~ 94 (572)
T 3jvp_A 79 ESGVDADDVIGIGVDF 94 (572)
T ss_dssp C---CCSCEEEEEEEE
T ss_pred HcCCChhHEEEEEEec
Confidence 4456556788877443
No 102
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=60.01 E-value=25 Score=35.91 Aligned_cols=136 Identities=16% Similarity=0.143 Sum_probs=72.2
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEee-eeeeeeccCCCcCCCCCH-HHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTL-KQPVILGRDLSSSCSIST-QSQARSVESLLMFRDIIQSHNISRDHTR 90 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~-k~~vrLg~~~~~~g~ls~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (573)
.++..||||.+.+++.+++ . |. ++.+. +.++. . . ++ +.++.+.+.+....+.+. ..+ .-.
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~--G~--il~~~~~~~~~--~------~-~~~~~l~~i~~~~~~i~~~~~-~~i---~gI 70 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-G--GK--EIADPVVLPAC--A------D-CLDKCLGNLVEGFKAIQAGLP-EAP---VAI 70 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-T--TE--ECSCCEEEECC--T------T-CHHHHHHHHHHHHHHHHTTCS-SCC---CEE
T ss_pred CEEEEEEECcceEEEEEEE-C--CE--EEEEEEEEECC--C------C-CHHHHHHHHHHHHHHHHHHhh-cCC---eEE
Confidence 5678999999999999997 4 42 44333 33321 1 1 23 333333331111111111 122 224
Q ss_pred EEEehh--------hhhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhh----c-----cCCCCCCce
Q 008237 91 AVATAA--------VRAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVL----Q-----FLPVFDRLV 145 (573)
Q Consensus 91 ~vATsA--------~R~A~N~------~~fl~~i~~~tG~~i~VIsg~eEA~l~~--~gv~----~-----~~~~~~~~~ 145 (573)
.||... +..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- .|.. . .-....++.
T Consensus 71 GIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~ 150 (366)
T 3mcp_A 71 SFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNL 150 (366)
T ss_dssp EEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEE
T ss_pred EEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHHhCCCcccccccccccccCCCCcE
Confidence 555433 2334453 2466788999999999998766555542 2300 0 011123457
Q ss_pred EEEEeCCCceEEEEeeCCeEEE
Q 008237 146 LSVDIGGGSTEFVIGKRGKVVF 167 (573)
Q Consensus 146 lviDIGGGStEl~~~~~~~~~~ 167 (573)
+++-+|.| +--.++-+|++..
T Consensus 151 v~l~lGtG-IG~givi~G~l~~ 171 (366)
T 3mcp_A 151 LGVTLGTG-FGAGVVIDGELLR 171 (366)
T ss_dssp EEEEESSS-EEEEEEETTEECC
T ss_pred EEEEECCc-ceEEEEECCEEec
Confidence 88888876 4444555777653
No 103
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=59.20 E-value=30 Score=36.79 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=44.2
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTR 90 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~l--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (573)
++..||+|+.|+|..+++. +|. ++.+.+.+...- ....|.. .+ +-.+.+++++++ ++++.+++..+|.
T Consensus 3 ~~lgiDiGtts~k~~l~d~--~G~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~---~~~~~~~~~~~i~ 73 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH--SGE--IYSTGQLEHDQI--FPRAGWVEHNPEQIWNNVREVVGL---ALTRGNLTHEDIA 73 (504)
T ss_dssp EEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHHTTCCGGGEE
T ss_pred EEEEEecCCcceEEEEECC--CCC--EEEEEEEeccee--cCCCCceeECHHHHHHHHHHHHHH---HHHHcCCCcccEE
Confidence 5789999999999999974 454 444444443221 1122222 33 334555555554 4455666555688
Q ss_pred EEEehhhh
Q 008237 91 AVATAAVR 98 (573)
Q Consensus 91 ~vATsA~R 98 (573)
+|+-++-+
T Consensus 74 ~Igis~~g 81 (504)
T 2d4w_A 74 AVGITNQR 81 (504)
T ss_dssp EEEEEECS
T ss_pred EEEEeCCC
Confidence 88755443
No 104
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=58.76 E-value=20 Score=35.06 Aligned_cols=125 Identities=13% Similarity=0.074 Sum_probs=67.9
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeee-eecc-CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPV-ILGR-DLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~v-rLg~-~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
+..||+|..++|..+++ + |. ++.+.+.+. .... +. ++.+++..++++... ....+. -..+
T Consensus 2 ~lgiDiGGT~i~~~l~d-~--g~--il~~~~~~~~~~~~~~~-------~~~~~~i~~~i~~~~---~~~~i~---~igi 63 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-N--GA--VIKRLGTKGINPFFQSE-------EEIQQKLTASLLPQL---PEGKFN---AVYF 63 (291)
T ss_dssp --CEECCTTCEEEEEEC-S--SS--EEEEEEECCCCTTTSCS-------TTTTTTTTC-------------------CEE
T ss_pred EEEEEeccccEEEEEEc-C--Ce--EEEEEECCCCCcccCCH-------HHHHHHHHHHHHHhc---Cccccc---EEEE
Confidence 46899999999999997 4 43 344433321 1100 11 111222222222221 111231 2456
Q ss_pred EehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 008237 93 ATAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (573)
Q Consensus 93 ATsA~R~A~N~~~fl~~i~~~tG~--~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (573)
++..+- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||--..+..+|++.
T Consensus 64 g~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~------g--~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 64 YGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC------G--QKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp ECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT------T--TSCBEEEEESSSEEEEEECSSSEEE
T ss_pred EcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc------C--CCCcEEEEeCCChheEEECCCCcEE
Confidence 777753 45556788889999994 9999887766555432 2 2346777799999545555577764
No 105
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=58.09 E-value=7.4 Score=40.05 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=27.6
Q ss_pred hhHHH-HHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008237 361 KAGAQ-CASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (573)
Q Consensus 361 ~ha~~-V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i 415 (573)
+|.-. |+.+|.++.+. +..+ .+-++.++-+||+|||||+-+
T Consensus 78 eHtLerVa~~A~~l~~~----YP~~----------~~~Er~~l~~aALLHDIGKl~ 119 (393)
T 3kq5_A 78 NEGLLRGVNSLNHYIQN----HPEA----------TPLERYALFSAGLLLEVAHAV 119 (393)
T ss_dssp HHHHHHHHHHHHHHHHH----CTTC----------CHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHh----CCCC----------CchHHHHHHHHHHHhccchhe
Confidence 46666 77788876543 2111 112367999999999999884
No 106
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=57.11 E-value=3.9 Score=39.27 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhcccccCCCCchhhh
Q 008237 400 EYLEAACLLHNIGHFTSKKGYHKQS 424 (573)
Q Consensus 400 ~lL~~Aa~LhdiG~~i~~~~~~khs 424 (573)
..+..||+|||+|.-+...++.+|+
T Consensus 79 dw~~laaLlHDLGkll~~~~~~qW~ 103 (250)
T 2ibn_A 79 DWFHLVGLLHDLGKVLALFGEPQWA 103 (250)
T ss_dssp HHHHHHHHHTTGGGHHHHTTCCGGG
T ss_pred hHHHHHHHHhccHhhhcccCCcchh
Confidence 5799999999999988877777664
No 107
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=53.55 E-value=10 Score=39.64 Aligned_cols=54 Identities=4% Similarity=-0.043 Sum_probs=39.3
Q ss_pred HHHHHHHHHh-hcccccC-------C---CCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhc
Q 008237 400 EYLEAACLLH-NIGHFTS-------K---KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (573)
Q Consensus 400 ~lL~~Aa~Lh-diG~~i~-------~---~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hr 453 (573)
.+|.+||+|| |||.... . ..|.+-+..++..--...|++.++...++.++..|.
T Consensus 287 ~~L~lAALLH~di~K~~~~~~~~~G~~~~~~h~~~ga~~a~~~~~rl~l~~r~~~~v~~lv~lq~ 351 (415)
T 3aql_A 287 PAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQL 351 (415)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHhcCcchhhhhhhhhhccCCCchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788999999 9988521 1 235555566664322369999999999999998884
No 108
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=53.31 E-value=20 Score=38.26 Aligned_cols=77 Identities=8% Similarity=-0.010 Sum_probs=42.1
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHcCCCcccE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (573)
+++..||||+.++|..+++. +|. ++.+.+.++..-. ...|. -.+ +-.+.+++++++..+... .+++..+|
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~~--~~~g~~e~d~~~~~~~i~~~i~~~~~~~~-~~~~~~~i 76 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE--ELN--IVHSNNLNHEQKC--LKPGWYEHDPIEIMTNLYNLMNEGIKVLK-DKYTSVII 76 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCCBC--CSTTCCEECHHHHHHHHHHHHHHHHHHHH-HHSSSCEE
T ss_pred cEEEEEEeCCcceEEEEECC--CCC--EEEEEEEeeeeec--CCCCcEEECHHHHHHHHHHHHHHHHHHhh-cCCCccce
Confidence 36789999999999999974 454 4544444432211 11122 133 334555566665433220 03443467
Q ss_pred EEEEehh
Q 008237 90 RAVATAA 96 (573)
Q Consensus 90 ~~vATsA 96 (573)
.+|+-++
T Consensus 77 ~~Igis~ 83 (503)
T 2w40_A 77 KCIGITN 83 (503)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 7776444
No 109
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=52.89 E-value=19 Score=38.38 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=18.8
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCE
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKF 38 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~ 38 (573)
+++..||+|+.|+|..+++ .+|++
T Consensus 6 ~~~lgIDiGTts~Ka~l~d--~~G~i 29 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWD--LDGRM 29 (482)
T ss_dssp --CEEEEECSSEEEEEEEC--TTSCE
T ss_pred ceEEEEEcCCCCeEEEEEE--CCCcE
Confidence 4688999999999999997 35654
No 110
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=52.88 E-value=99 Score=32.84 Aligned_cols=60 Identities=23% Similarity=0.267 Sum_probs=41.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~ 78 (573)
.|-+||+|-.++|..++++..++.++++. .+. ++-..+.. |. .++-.+-..+++..|.+-
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~g~~~~~~~~-~~~--~Ip~~~~~-~~-~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLGGNHDFDTTQ-NKY--RLPDHLRT-GT-SEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEESSSCEEEEE-EEE--ECCTTGGG-SB-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEEEEEEECCCCceEEEE-EEE--ecCchhcc-CC-HHHHHHHHHHHHHHHHHH
Confidence 68999999999999999998665666542 222 33333221 11 367788888889888764
No 111
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=51.40 E-value=13 Score=33.08 Aligned_cols=86 Identities=16% Similarity=0.229 Sum_probs=57.1
Q ss_pred eEEEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~-~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (573)
++-.||.|+..+-+-|.+. .|. ..++.-. +-.. .|.-...+.+.+++++|+++ ..+|
T Consensus 4 riLGiDpG~~riGvAv~d~--~g~~a~p~~~I----~~~~-------------~r~~~~~~~l~~li~~~~~~---~ivV 61 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE--MGWTAQGIETI----KINE-------------AEGDYGLSRLSELIKDYTID---KIVL 61 (150)
T ss_dssp EEEEEEECSSEEEEEEECT--TSSSEEEEEEE----ECBG-------------GGTBCCHHHHHHHHTTSEEE---EEEE
T ss_pred EEEEEEccCCEEEEEEEEC--CCCEEeeEEEE----EcCC-------------cchHHHHHHHHHHHHHcCCC---EEEE
Confidence 4789999999999888864 343 2222222 1111 02234567778888889874 5678
Q ss_pred E-------ehhhhhcCChHHHHHHHHHHcCCcEEEeC
Q 008237 93 A-------TAAVRAAENKDEFVECVREKVGFEVDVLT 122 (573)
Q Consensus 93 A-------TsA~R~A~N~~~fl~~i~~~tG~~i~VIs 122 (573)
+ |+ -+.+.-...|+.++..+.+++|...|
T Consensus 62 GlP~~~nGt~-~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 62 GFPKNMNGTV-GPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp ECCCCBTTBC-CHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred eeeecCCcch-hHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 7 33 35555567899999888899998854
No 112
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=48.01 E-value=2e+02 Score=27.79 Aligned_cols=127 Identities=19% Similarity=0.223 Sum_probs=71.8
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccEEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHTRAV 92 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i~~v 92 (573)
++..||||.+++++.+++. +|. ++.+.+.++. . . ++ +..++.+..+ +++. .+ .-..|
T Consensus 5 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~---~--~----~~---~~~~~~i~~~---~~~~~~i---~gigi 62 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP--HGE--IILTKSAEIS---G--S----DG---DQILAEMKVF---LAENTDV---TGIAV 62 (297)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECS---T--T----CH---HHHHHHHHHH---HHTCTTC---CEEEE
T ss_pred EEEEEEeCCCeEEEEEECC--CCC--EEEEEEecCC---C--C----CH---HHHHHHHHHH---HhhcCCe---eEEEE
Confidence 4789999999999999965 354 4444443321 0 1 12 2233333332 2222 22 22445
Q ss_pred Eehhh--------hhcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceEE
Q 008237 93 ATAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTEF 157 (573)
Q Consensus 93 ATsA~--------R~A~N~-----~~fl~~i~~~tG~~i~VIsg~eEA~l~~--~gv~~~~~~~~~~~lviDIGGGStEl 157 (573)
|.... ..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- +|... ..++.+++-+|.| +--
T Consensus 63 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~ 137 (297)
T 4htl_A 63 SAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQ----DLDDFLCLTIGTG-IGG 137 (297)
T ss_dssp EESSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEE
T ss_pred ecCcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCCCC----CCCcEEEEEECcc-eEE
Confidence 54433 223332 2467888999999999988755544432 23221 1245889999987 455
Q ss_pred EEeeCCeEEE
Q 008237 158 VIGKRGKVVF 167 (573)
Q Consensus 158 ~~~~~~~~~~ 167 (573)
.++-+|++..
T Consensus 138 giv~~G~l~~ 147 (297)
T 4htl_A 138 GIFSNGELVR 147 (297)
T ss_dssp EEEETTEECC
T ss_pred EEEECCEEEe
Confidence 5566787764
No 113
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=47.20 E-value=96 Score=30.06 Aligned_cols=136 Identities=9% Similarity=0.062 Sum_probs=0.0
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (573)
++-+||||-.++++-+++-. +.+...+..+....-.+ +-...+.++++.++++..++..++
T Consensus 1 MlL~IDIGNT~ik~gl~~~~-----~l~~~~r~~T~~~~t~d--------------e~~~~l~~ll~~~~~~~~~i~~ii 61 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFEEG-----ELRQHWRMETDRHKTED--------------EYGMLVKQLLEHEGLSFEDVKGII 61 (268)
T ss_dssp CEEEEEECSSEEEEEEEETT-----EEEEEEEEECCTTCCHH--------------HHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred CEEEEEECcCcEEEEEEECC-----EEEEEEEecCCCcCCHH--------------HHHHHHHHHHHHcCCCcccCcEEE
Q ss_pred ehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHH----------------HHHHhhhhccCCCCCCceEEEEeCCCceEE
Q 008237 94 TAAVRAAENKDEFVECVREKVGFEVDVLTGEQEA----------------KFVYMGVLQFLPVFDRLVLSVDIGGGSTEF 157 (573)
Q Consensus 94 TsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA----------------~l~~~gv~~~~~~~~~~~lviDIGGGStEl 157 (573)
=|.+. ..-...+.+.+++.++.++.+++..... -....|+....+ .+.+|+|.|..-|==
T Consensus 62 ISSVv-p~~~~~l~~~~~~~~~~~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~---~~~iVVD~GTAtT~d 137 (268)
T 2h3g_X 62 VSSVV-PPIMFALERMCEKYFKIKPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYG---SPLIIVDFGTATTYC 137 (268)
T ss_dssp EEESC-HHHHHHHHHHHHHHTCCCCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHC---SSEEEEEESSEEEEE
T ss_pred EEccC-hhHHHHHHHHHHHHhCCCeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhcC---CCEEEEECCCceEEE
Q ss_pred EEeeCCeEEEEEEEe
Q 008237 158 VIGKRGKVVFCESVN 172 (573)
Q Consensus 158 ~~~~~~~~~~~~Slp 172 (573)
.+-.+|...-..=.|
T Consensus 138 ~v~~~g~~lGG~I~P 152 (268)
T 2h3g_X 138 YINEEKHYMGGVITP 152 (268)
T ss_dssp EECTTSEEEEEEEEE
T ss_pred EECCCCcEEEEEECc
No 114
>2e5n_A RNA polymerase II elongation factor ELL2; ELL_N2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.34 E-value=27 Score=28.81 Aligned_cols=53 Identities=17% Similarity=0.215 Sum_probs=37.4
Q ss_pred cCcchHHHHHHHHHHhhccccc--CCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHH
Q 008237 394 FEDKDLEYLEAACLLHNIGHFT--SKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLT 449 (573)
Q Consensus 394 ~~~~~r~lL~~Aa~LhdiG~~i--~~~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia 449 (573)
++++++..| -++|.+|+..= +..++-+..+|-=.+-+ ++|+|..|+.++-.+.
T Consensus 41 l~~~d~~~l--~~iL~eVa~~~~~~~~y~Lk~~~~~eVq~d-Wp~Yte~erq~v~r~L 95 (100)
T 2e5n_A 41 VNQKDKNSL--GAILQQVANLNSKDLSYTLKDYVFKELQRD-WPGYSEIDRRSLESVL 95 (100)
T ss_dssp CCHHHHHHH--HHHHHHHEEEETTTTEEEECSTHHHHSCTT-CTTCCTTHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHhcCCcCCeeehhHHHHHHhccC-CCCCCHHHHHHHHHHH
Confidence 344454444 45999999883 33444555577777888 9999999999887654
No 115
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=46.23 E-value=46 Score=35.60 Aligned_cols=26 Identities=35% Similarity=0.483 Sum_probs=20.8
Q ss_pred CCeEEEEEecccceEEEEEEEeCCCCE
Q 008237 12 QTLFASIDMGTSSFKLLIIRAYPNGKF 38 (573)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~ 38 (573)
.+++..||+|+.|+|..+++.. +|++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~-~G~i 29 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAE-TGEL 29 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETT-TCCE
T ss_pred CcEEEEEEeccccEEEEEEECC-CCeE
Confidence 3578999999999999999743 4543
No 116
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=46.12 E-value=1.2e+02 Score=24.63 Aligned_cols=84 Identities=17% Similarity=0.248 Sum_probs=54.3
Q ss_pred EEEEEecccceEEEEEEEeCCCCE-EEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEE
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKF-LTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~-~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (573)
+-+||.|+..|=+.|.+. .+.+ .++.-.+. + +. -..+....+++++|++. -.+||
T Consensus 3 iLglD~G~kriGvAvsd~--~~~~A~pl~ti~~-----~--------~~------~~~~~~l~~li~e~~v~---~iVvG 58 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE--GVPLASGRGYLVR-----K--------TL------EEDVEALLDFVRREGLG---KLVVG 58 (98)
T ss_dssp EEEEEESSSEEEEEEECS--CCSSCCCEEEEEC-----C--------CH------HHHHHHHHHHHHHHTCC---EEEEE
T ss_pred EEEEEeCCCEEEEEEEeC--CCCeeeeeEEEEc-----c--------Cc------HHHHHHHHHHHHHcCCC---EEEEe
Confidence 678999999998888754 2321 12211110 0 01 14466777888889985 46677
Q ss_pred ------ehhhhhcCChHHHHHHHHHHcCCcEEEeCh
Q 008237 94 ------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (573)
Q Consensus 94 ------TsA~R~A~N~~~fl~~i~~~tG~~i~VIsg 123 (573)
-+.=..|.-...|.++++.+ +++|...+.
T Consensus 59 lP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DE 93 (98)
T 1iv0_A 59 LPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWDE 93 (98)
T ss_dssp CCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECC
T ss_pred eccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 12224566778999999998 999988763
No 117
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=46.08 E-value=22 Score=32.39 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i 415 (573)
.|+-+|+.+|..|-+.++. .+.+ . +...+..+|+|||++-.+
T Consensus 35 eHs~rVa~~A~~la~~~~~-~~~~---------~---d~~~v~~~aLlHD~~E~~ 76 (177)
T 2cqz_A 35 DHSFGVAFITLVLADVLEK-RGKR---------I---DVEKALKMAIVHDLAEAI 76 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCC---------C---CHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCC---------C---CHHHHHHHHHHhchHHHH
Confidence 7999999999887554322 2211 1 224456899999998443
No 118
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=42.72 E-value=63 Score=32.12 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=42.3
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeee-eeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLLM 74 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~-~vrLg~~~~~~g~ls~e~i~r~~~~L~~ 74 (573)
....+||||.-|+-+.+++ ++.+....+..- .|||-+..+.++..+++.++++.+.++.
T Consensus 131 ~~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~ 190 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGN---KNEILWKQSFEIGGQRLIDRFHVHDPMREDDRVMMHNYFDE 190 (315)
T ss_dssp CCEEEEEECSSCEEEEEEC---SSCEEEEEEESCCHHHHHHHSCCCSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEEE---CCeEeeeEEEechhhHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999984 344433333332 3577777788888999888877766554
No 119
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=41.96 E-value=1e+02 Score=26.75 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=55.1
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEE
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (573)
.+-+||.|+-.|=+.|.+.. ...-.++...... ... ..+..+.+++++|+++ -.+||
T Consensus 4 ~iLglD~G~kriGvAvsd~~-~~~A~pl~ti~~~-----~~~--------------~~~~~l~~li~e~~v~---~iVvG 60 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI-TGTARPLPAIKAQ-----DGT--------------PDWNIIERLLKEWQPD---EIIVG 60 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT-TTEEEEEEEEEEE-----TTE--------------ECHHHHHHHHHHHCCS---EEEEE
T ss_pred eEEEEEeCCCEEEEEEEcCC-CCEEeeEEEEEcC-----Ccc--------------hHHHHHHHHHHHcCCC---EEEEe
Confidence 47899999999988888642 2222334333221 100 1245667788888985 45677
Q ss_pred -------ehhhhhcCChHHHHHHHHHHcCCcEEEeCh
Q 008237 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (573)
Q Consensus 94 -------TsA~R~A~N~~~fl~~i~~~tG~~i~VIsg 123 (573)
|..- .|.-...|.++++.+++++|...+.
T Consensus 61 lP~~mdGt~~~-~~~~~~~f~~~L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 61 LPLNMDGTEQP-LTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp EEECTTSCBCH-HHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cccCCCcCcCH-HHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3321 2334578999999999999988774
No 120
>2doa_A RNA polymerase II elongation factor ELL; C19ORF17, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.81
Probab=40.71 E-value=24 Score=29.32 Aligned_cols=54 Identities=17% Similarity=0.215 Sum_probs=38.4
Q ss_pred cCcchHHHHHHHHHHhhcccc--cCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 008237 394 FEDKDLEYLEAACLLHNIGHF--TSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTR 450 (573)
Q Consensus 394 ~~~~~r~lL~~Aa~LhdiG~~--i~~~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~ 450 (573)
++..++..| -++|.+|+.. =+...+-+..+|-=.+-+ ++|+|..||.++-.+..
T Consensus 40 l~~~d~~~l--~~iL~eVA~~~~~~~~y~Lk~~~y~eVq~d-Wp~Yte~erq~v~r~l~ 95 (104)
T 2doa_A 40 LTQADKDAL--DGLLQQVANMSAKDGTCTLQDCMYKDVQKD-WPGYSEGDQQLLKRVLV 95 (104)
T ss_dssp CCHHHHHHH--HHHHHHSSEECSSSCEEECCSSGGGGCCSC-CTTCCSHHHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHhcCCcCCeeeehHHHHHHhcCC-CCCCCHHHHHHHHHHHH
Confidence 344444444 4599999988 344445555577777888 99999999999877654
No 121
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=34.24 E-value=29 Score=36.00 Aligned_cols=43 Identities=12% Similarity=0.080 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhcC
Q 008237 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRK 454 (573)
Q Consensus 400 ~lL~~Aa~LhdiG~~i~~~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hrk 454 (573)
.++.||++|||+|. +-...+.. =++||.+++..++.++++|..
T Consensus 248 ~~l~~aaLlhdigk--------~~a~~~l~----rLkls~~~~~~v~~Lv~~~~~ 290 (404)
T 1miw_A 248 REERWALLCHALGV--------QESRPFLR----AWKLPNKVVDEAGAILTALAD 290 (404)
T ss_dssp HHHHHHHHHHHHTC--------SCHHHHHH----HTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCH--------HHHHHHHH----HcCCCHHHHHHHHHHHHHHHh
Confidence 36889999999996 22333332 278999999999999998864
No 122
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=33.68 E-value=45 Score=32.47 Aligned_cols=29 Identities=10% Similarity=0.068 Sum_probs=26.5
Q ss_pred eEEEEeCCCceEEEEeeCCeEEEEEEEeh
Q 008237 145 VLSVDIGGGSTEFVIGKRGKVVFCESVNL 173 (573)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~~~~~Slpl 173 (573)
.|++|||+-++-+.+++++++...++++-
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T 32 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTS 32 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecC
Confidence 58999999999999999999998888874
No 123
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=32.86 E-value=56 Score=32.54 Aligned_cols=58 Identities=17% Similarity=0.135 Sum_probs=39.5
Q ss_pred CCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeee---eeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008237 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQP---VILGRDLSSSCSISTQSQARSVESLLM 74 (573)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~---vrLg~~~~~~g~ls~e~i~r~~~~L~~ 74 (573)
.....+||||..|+-+.+++ ++.+ +.....+ +||-+..+.++..+++.++++.+.++.
T Consensus 137 ~~~~lvvDIGGGStEl~~~~---~~~~--~~~~Sl~~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~ 197 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGK---GYKV--REVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEK 197 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEE---TTEE--EEEEEECCCHHHHHHHHCCSSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEe---CCce--eeEEEEeccHHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 44689999999999999985 3433 3333332 466666667778888887776655554
No 124
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=32.49 E-value=35 Score=34.44 Aligned_cols=25 Identities=32% Similarity=0.418 Sum_probs=22.1
Q ss_pred CceEEEEeCCCceEEEEeeCCeEEE
Q 008237 143 RLVLSVDIGGGSTEFVIGKRGKVVF 167 (573)
Q Consensus 143 ~~~lviDIGGGStEl~~~~~~~~~~ 167 (573)
++++++||||=.|.|+.+.+|++..
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 3589999999999999999998753
No 125
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=32.24 E-value=30 Score=36.56 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=19.6
Q ss_pred CCCeEEEEEecccceEEEEEEEe
Q 008237 11 PQTLFASIDMGTSSFKLLIIRAY 33 (573)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~ 33 (573)
+.+.+..||+|+.|+|..+++.+
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEE
T ss_pred CcceEEEEEecCCCceEEEEEec
Confidence 34568899999999999999865
No 126
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=30.61 E-value=55 Score=33.45 Aligned_cols=42 Identities=12% Similarity=0.144 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~ 413 (573)
.||..|...+-.+.... ++.. .+++-+..-+-.||+.||+|.
T Consensus 85 ~HA~dV~q~~~~ll~~~----~l~~-------~l~~le~~alliAAl~HDv~H 126 (365)
T 1taz_A 85 IHAADVTQTVHCFLLRT----GMVH-------CLSEIELLAIIFAAAIHDYEH 126 (365)
T ss_dssp HHHHHHHHHHHHHHHHH----SGGG-------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHhh----hHHh-------hCCHHHHHHHHHHHHHhcCCC
Confidence 57777777665443222 1111 256667788999999999994
No 127
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=30.05 E-value=53 Score=35.16 Aligned_cols=57 Identities=18% Similarity=0.116 Sum_probs=38.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeee-eeeeccCCCcCCCCCHHHHHHHHHHHH
Q 008237 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLL 73 (573)
Q Consensus 14 ~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~-~vrLg~~~~~~g~ls~e~i~r~~~~L~ 73 (573)
...+||||..|+-+.+++ ++.+....+..- .|||-+..+.++.++++.++++.+.++
T Consensus 138 ~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrlte~f~~~~~~~~~~~~~~~~~i~ 195 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGE---NFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAA 195 (513)
T ss_dssp CEEEEEECSSCEEEEEEE---TTEEEEEEEESCCHHHHHHHHSGGGBCCHHHHHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEe---CCeeeEEEEEeccHHHHHHHHcccCCCCHHHHHHHHHHHH
Confidence 478999999999999984 343332222221 246666667778889998888755444
No 128
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=29.25 E-value=60 Score=35.17 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=38.9
Q ss_pred CeEEEEEecccceEEEEEEEeCCCCEEEEEeeeee-eeeccCCCcCCCCCHHHHHHHHHHHHHHHH
Q 008237 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQP-VILGRDLSSSCSISTQSQARSVESLLMFRD 77 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~-vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~ 77 (573)
++++.||||+.++...++++++ |.++++-.-..+ ..+ +|. .+.+..+.++|++-.+
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~-g~i~~l~~g~~~ttGi-KGt-------~~Ni~g~~~si~~a~~ 58 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYP-QARAFVASGIVATTGM-KGT-------RDNIAGTLAALEQALA 58 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBT-TBCCCCEEEEEECCSS-TTS-------GGGHHHHHHHHHHHHT
T ss_pred cEEEEEEecCceEEEEEEEEcC-CeEEEEEeecccCCcc-cee-------eeCHHHHHHHHHHHHH
Confidence 5799999999999999999874 777776555443 233 443 3446666666665543
No 129
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=28.57 E-value=1.2e+02 Score=31.87 Aligned_cols=61 Identities=15% Similarity=0.129 Sum_probs=38.9
Q ss_pred CeEEEEEecccceEEEEEEEeC-CCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 008237 13 TLFASIDMGTSSFKLLIIRAYP-NGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~~~-~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~ 78 (573)
-.|-+||+|..++|..+++... ++.+++.. .+ .++-..+.. + =.++-.+...+++..|.+-
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~-~~--~~ip~~~~~-~-~~~~lfd~Ia~~i~~~l~~ 129 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQE-RT--YCIPAEKMS-G-SGTELFKYIAETLADFLEN 129 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEE-EE--ECCCTTTTT-S-BHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEE-EE--EecCCcccC-C-CHHHHHHHHHHHHHHHHHh
Confidence 4788999999999999999864 34344421 11 222222111 1 1256678888999988653
No 130
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=28.00 E-value=55 Score=33.62 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHHHHHHHHHHhc
Q 008237 399 LEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (573)
Q Consensus 399 r~lL~~Aa~LhdiG~~i~~~~~~khs~yiI~ns~~l~G~s~~E~~~iA~ia~~hr 453 (573)
..++.+||+|||+|. +-...+.. =++||.+++..++.++++|.
T Consensus 256 ~~~l~laaLlhdi~~--------~~a~~~~~----rL~ls~~~~~~v~~Lv~~h~ 298 (390)
T 1vfg_A 256 YGWLYLLILISNLDY--------ERGKHFLE----EMSAPSWVRETYKFMKFKLG 298 (390)
T ss_dssp HHHHHHHHHHCSCCS--------STTHHHHH----HTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHccCCH--------HHHHHHHH----HcCCCHHHHHHHHHHHHHHH
Confidence 358999999999995 12222332 26799999999999998873
No 131
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=26.65 E-value=65 Score=29.84 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHHHHHH-hcccccchhhhhhcccCcchHHHHHHHHHHhhcccccCCCC
Q 008237 361 KAGAQCASIAKDIFEGLR-KCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKG 419 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~-~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~~i~~~~ 419 (573)
.|+-+|+.+|..|=. +. +.++- .-+......+|+|||+|..+-.+-
T Consensus 34 eHS~~VA~lA~~la~-~~~~~~~~------------~vD~~~~~~~aLlHDi~E~~~GDi 80 (201)
T 2paq_A 34 EHSLQVAMVAHALAA-IKNRKFGG------------NVNAERIALLAMYHDASEVLTGDL 80 (201)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHSCC------------CCCHHHHHHHHHHTTTTHHHHCCC
T ss_pred HHHHHHHHHHHHHHh-hhHHhcCc------------ccCHHHHHHHHHhcccccccCCCC
Confidence 688888888886421 11 22210 112356778899999999887664
No 132
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=26.00 E-value=2.7e+02 Score=27.28 Aligned_cols=120 Identities=11% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCCeEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccEE
Q 008237 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (573)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (573)
+..++..||||...+|+.+++.. ++.+....+... ...+...+.++.|.+... ..+ .-.
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~-~g~i~~~~~~~~----------------~~~~~~~~~i~~~~~~~~-~~i---~gi 70 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIA-SGEISQAKTYSG----------------LDYPSLEAVIRVYLEEHK-VEV---KDG 70 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEG----------------GGCSCHHHHHHHHHHHSC-CCC---CEE
T ss_pred CCCEEEEEEechhheEEEEEECC-CCcEEEEEEecC----------------CCcCCHHHHHHHHHHhcC-CCc---cEE
Q ss_pred EEEehhhhhcC---------ChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhh--------hccCCCCCCceEEEEeCC
Q 008237 91 AVATAAVRAAE---------NKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGV--------LQFLPVFDRLVLSVDIGG 152 (573)
Q Consensus 91 ~vATsA~R~A~---------N~~~fl~~i~~~tG~~-i~VIsg~eEA~l~~~gv--------~~~~~~~~~~~lviDIGG 152 (573)
+||....=+.. + -. .+.+++++|++ |.|.+.-.=+-|.-.-. -..-....++.+++-+|.
T Consensus 71 gi~~pG~vd~~~~~~~nl~w~-~~-~~~l~~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GT 148 (332)
T 1sz2_A 71 CIAIACPITGDWVAMTNHTWA-FS-IAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGT 148 (332)
T ss_dssp EEEESSCCCSSEECCSSSCCC-EE-HHHHHHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESS
T ss_pred EEEEeCceeCCEEeeeCCCCc-CC-HHHHHHHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCc
Q ss_pred C
Q 008237 153 G 153 (573)
Q Consensus 153 G 153 (573)
|
T Consensus 149 G 149 (332)
T 1sz2_A 149 G 149 (332)
T ss_dssp S
T ss_pred c
No 133
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=25.93 E-value=1.4e+02 Score=31.23 Aligned_cols=70 Identities=16% Similarity=0.321 Sum_probs=37.0
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHcCCCcccEEE
Q 008237 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHTRA 91 (573)
Q Consensus 15 ~AvIDIGSNsirL~I~e~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (573)
+..||+|+.|+|..+++. +|. ++...+.+...- ....|. -++ +-.+.+++++++.. ++.+. .+|.+
T Consensus 2 ~lgiDiGtt~~k~~l~d~--~g~--~l~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~~---~~~~~--~~i~~ 70 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE--QGE--VVAAQTEKLTVS--RPHPLWSEQDPEQWWQATDRAMKALG---DQHSL--QDVKA 70 (484)
T ss_dssp EEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHHH---HHSCC--TTCCE
T ss_pred EEEEEecCcccEEEEECC--CCC--EEEEEEeccccc--cCCCCCEeECHHHHHHHHHHHHHHHH---HhCCc--cceEE
Confidence 568999999999999964 454 344444333221 112222 233 33455555665543 33332 24555
Q ss_pred EEeh
Q 008237 92 VATA 95 (573)
Q Consensus 92 vATs 95 (573)
|+-+
T Consensus 71 Igis 74 (484)
T 2itm_A 71 LGIA 74 (484)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5543
No 134
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=24.97 E-value=56 Score=27.93 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCC
Q 008237 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGG 152 (573)
Q Consensus 104 ~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGG 152 (573)
.+|.+.+..-+|+.|+.++.. ++. +.+-...++++.+++|..|
T Consensus 32 ~eFReav~~LlGykId~~~~~---~~r---l~S~Ya~~~~d~L~F~~~~ 74 (123)
T 4dzo_A 32 QEFRKACYTLTGYQIDITTEN---QYR---LTSLYAEHPGDCLIFKATS 74 (123)
T ss_dssp HHHHHHHHHHHSEEEEEETTT---EEE---EEETTCSSTTCCEEEEECC
T ss_pred HHHHHHHHHHhCeEEEEccCC---eEE---EEEeecCCCCCeEEEEecC
Confidence 689999999999999999742 222 2222333335689999865
No 135
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=24.91 E-value=1.2e+02 Score=26.42 Aligned_cols=58 Identities=12% Similarity=0.039 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHH
Q 008237 61 STQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEA 127 (573)
Q Consensus 61 s~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA 127 (573)
+.+.|..++ .+.++++|++...|.++||-.+.. .+.-+-++-++.|++++..+.+|=+
T Consensus 23 ~~~~i~~ai------~~aL~~~~l~~~~v~~latid~K~---dE~gL~~~A~~lg~pl~~~~~eeL~ 80 (145)
T 2w6k_A 23 SAEHLRALL------ERTLGEHGRSLAELDALASIDGKR---DEPGLRQLATLLERPVHFLAPAVLH 80 (145)
T ss_dssp CHHHHHHHH------HHHHHHTTCCGGGCCEEEEECSSS---CCHHHHHHHHHHTSCEEEECHHHHH
T ss_pred CHHHHHHHH------HHHHHHcCCCHHHcceEechHHhC---CCHHHHHHHHHhCCCcEEeCHHHHh
Confidence 566655433 455667888888899999987653 3345556667899999999877754
No 136
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=23.93 E-value=89 Score=31.77 Aligned_cols=42 Identities=14% Similarity=0.145 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~ 413 (573)
.||..|...+-.+ +... ++.. .+++-+..-+-.||+.||+|.
T Consensus 103 ~HA~dV~q~~~~l---l~~~-~l~~-------~l~~le~~alliAAl~HDv~H 144 (359)
T 2r8q_A 103 YHVVDVCQTLHTY---LYTG-KASE-------LLTELECYVLLVTALVHDLDH 144 (359)
T ss_dssp HHHHHHHHHHHHH---HHTS-CGGG-------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHH---HHcc-cchh-------cccHHHHHHHHHHHHHhcCCC
Confidence 5777777655443 3221 2211 356677788999999999995
No 137
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=23.78 E-value=1e+02 Score=31.06 Aligned_cols=62 Identities=11% Similarity=0.085 Sum_probs=40.8
Q ss_pred CeEEEEEecccceEEEEEEE--eC-CCCEEEEEeee-eeeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 008237 13 TLFASIDMGTSSFKLLIIRA--YP-NGKFLTIDTLK-QPVILGRDLSSSCSISTQSQARSVESLLM 74 (573)
Q Consensus 13 ~~~AvIDIGSNsirL~I~e~--~~-~~~~~~i~~~k-~~vrLg~~~~~~g~ls~e~i~r~~~~L~~ 74 (573)
....+||||..|+-+.+++- .. .+.+....+.. -.+||-+..+.++..+++.++++.+.++.
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~ 211 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDE 211 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 45789999999999999853 11 02221121221 12466677777888999988887777665
No 138
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=23.77 E-value=52 Score=34.21 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=20.2
Q ss_pred cccccccCCCCeEEEEEecccceEEEEEEEe
Q 008237 3 TNTSYMQIPQTLFASIDMGTSSFKLLIIRAY 33 (573)
Q Consensus 3 ~~~~~~~~~~~~~AvIDIGSNsirL~I~e~~ 33 (573)
+|-|-+.|+++++=+|.-||.|+++.+++..
T Consensus 9 ~~gm~~~Ms~klILviN~GSSS~K~~lf~~~ 39 (415)
T 3sk3_A 9 HHGMASHMSSKLVLVLNCGSSSLKFAIIDAV 39 (415)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEETT
T ss_pred cccccccCCCCeEEEEeCchHhhhheeEECC
Confidence 4566677888899999999999999999853
No 139
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=23.35 E-value=1.9e+02 Score=29.47 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~ 413 (573)
.||..|...+-.| +.. -++.. .+++-+..-+-.||+.||+|.
T Consensus 86 ~HA~dV~q~~~~l---l~~-~~l~~-------~l~~le~~alliAAl~HDvdH 127 (377)
T 1f0j_A 86 LHAADVAQSTHVL---LST-PALDA-------VFTDLEILAAIFAAAIHDVDH 127 (377)
T ss_dssp HHHHHHHHHHHHH---HTC-GGGTT-------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHH---Hhc-chhhh-------hCCHHHHHHHHHHHHHcCCCC
Confidence 5777777665443 221 11211 356677788999999999995
No 140
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=22.16 E-value=1.3e+02 Score=30.34 Aligned_cols=57 Identities=11% Similarity=0.286 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHH
Q 008237 59 SISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKF 129 (573)
Q Consensus 59 ~ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l 129 (573)
..+.+.|..++ .+.++++|++...|.++||-.+. +.++-++.|++++..+.+|=+..
T Consensus 219 g~~~~~i~~ai------~~aL~~~~l~~~~v~~iasid~K--------L~~~A~~l~~pl~~~~~eeL~~v 275 (336)
T 3eeq_A 219 DVKMEEIRDGI------YKVLERLNLKRERIGIIASIREE--------VKKIADEFNVRFRLVNEEEINNF 275 (336)
T ss_dssp SCCHHHHHHHH------HHHHHHHTCCGGGEEEEEESCTT--------HHHHHHHHTCEEEECCHHHHHTC
T ss_pred CCCHHHHHHHH------HHHHHHcCCCHHHhhEEEcHHHH--------HHHHHHHhCCCEEEeCHHHHhhc
Confidence 34666665443 34456678888889999998875 66677788999999999986653
No 141
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=22.09 E-value=19 Score=36.46 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=37.5
Q ss_pred HHHHcCCCcccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 008237 78 IIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (573)
Q Consensus 78 ~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~i~~~tG~~i~VIsg~eEA~l~~~gv~~~~~~~~~~~lviDIGGGSt 155 (573)
.++.+|.. ++.+|....+.+ ...+.+.+.++ +.|+++.+.++..+..+...--..... ..+.-+|+=+||||+
T Consensus 28 ~l~~~g~~--~~livtd~~~~~-~~~~~v~~~L~-~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 28 IIKKGNFK--RVSLYFGEGIYE-LFGETIEKSIK-SSNIEIEAVETVKNIDFDEIGTNAFKI-PAEVDALIGIGGGKA 100 (354)
T ss_dssp HHGGGTCS--EEEEEEETTHHH-HHHHHHHHHHH-TTTCEEEEEEEECCCBHHHHHHHHTTS-CTTCCEEEEEESHHH
T ss_pred HHHhcCCC--eEEEEECccHHH-HHHHHHHHHHH-HcCCeEEEEecCCCCCHHHHHHHHHhh-hcCCCEEEEECChHH
Confidence 34455653 667777666655 23444444443 358888777632222111111111121 123358999999996
No 142
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=21.26 E-value=84 Score=31.88 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHHhhccc
Q 008237 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (573)
Q Consensus 361 ~ha~~V~~~a~~LFd~l~~~~~l~~~~~~~~~~~~~~~r~lL~~Aa~LhdiG~ 413 (573)
.||..|...+-.+. .. .++.. .+++-+..-+-.||+.||+|.
T Consensus 86 ~HA~dV~q~~~~ll---~~-~~l~~-------~l~~le~~alliAAl~HDv~H 127 (353)
T 1zkl_A 86 VHAADVTQAMHCYL---KE-PKLAN-------SVTPWDILLSLIAAATHDLDH 127 (353)
T ss_dssp HHHHHHHHHHHHHH---TS-HHHHT-------TCCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHH---hh-hHHhh-------hCCHHHHHHHHHHHHHhccCC
Confidence 57777766554432 21 11111 356677788999999999995
No 143
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=20.14 E-value=2.6e+02 Score=21.24 Aligned_cols=55 Identities=9% Similarity=0.190 Sum_probs=36.3
Q ss_pred eEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHhcCceEEEEeecCCCccccC
Q 008237 496 VDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSSNDRKD 562 (573)
Q Consensus 496 i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~~~~~~ 562 (573)
+.+..++..+.+.+...+ +. | ++..+++..+.+-+..-+++.|..+.+.|..+|.
T Consensus 10 ikiqrdgqeieidirvst--------gk---e-leralqelekalaragarnvqitisaendeqake 64 (96)
T 2jvf_A 10 IKIQRDGQEIEIDIRVST--------GK---E-LERALQELEKALARAGARNVQITISAENDEQAKE 64 (96)
T ss_dssp EEEEETTEEEEEEEECCS--------SS---H-HHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHH
T ss_pred EEEeeCCeEEEEEEEEcc--------cH---H-HHHHHHHHHHHHHhccccceEEEEEecChHHHHH
Confidence 334445666666665431 11 2 3466777777888888999999999888766553
Done!