BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008238
(573 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 155/242 (64%), Gaps = 6/242 (2%)
Query: 310 RKAKNKYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS 369
+K ++ + VP D ++ + +F ++VA++NFS N LG GGFG+VYKG L
Sbjct: 3 KKPQDHFFDVP-AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD 61
Query: 370 GQEIAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
G +AVKRL QGG+ +F+ EV +++ HRNL+RL GFC+ E++LVY ++ N S
Sbjct: 62 GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 121
Query: 429 LDYFLYE-PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP 487
+ L E PE Q LDW +R +I G ARG+ YLH+ +IIHRD+KA+NILLD E
Sbjct: 122 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 488 KISDFGMAKIFGVDQTQGNTNRIV-GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+ DFG+AK+ +D + V GT G++APEY G+ S K+DV+ +GV++LE+ITG
Sbjct: 182 VVGDFGLAKL--MDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 547 KK 548
++
Sbjct: 240 QR 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 142/217 (65%), Gaps = 5/217 (2%)
Query: 335 QFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-EFKNEV 393
+F ++VA++NF N LG GGFG+VYKG L G +AVKRL QGG+ +F+ EV
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE-PEKQQQLDWSRRYKIIG 452
+++ HRNL+RL GFC+ E++LVY ++ N S+ L E PE Q LDW +R +I
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV- 511
G ARG+ YLH+ +IIHRD+KA+NILLD E + DFG+AK+ +D + V
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDXHVXXAVR 196
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK 548
G G++APEY G+ S K+DV+ +GV++LE+ITG++
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 135/221 (61%), Gaps = 15/221 (6%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
F F ++ TNNF NK+GEGGFG VYKG + + +AVK+L+ ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWS 445
Q+F E+ ++AK QH NLV LLGF +G++ LVY ++PN SL L + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 446 RRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQG 505
R KI G A GI +LHE+ IHRD+K++NILLD KISDFG+A+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 506 NTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+RIVGT YMAPE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 134/221 (60%), Gaps = 15/221 (6%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
F F ++ TNNF NK+GEGGFG VYKG + + +AVK+L+ ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWS 445
Q+F E+ ++AK QH NLV LLGF +G++ LVY ++PN SL L + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 446 RRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQG 505
R KI G A GI +LHE+ IHRD+K++NILLD KISDFG+A+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 506 NTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
RIVGT YMAPE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 134/221 (60%), Gaps = 15/221 (6%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
F F ++ TNNF NK+GEGGFG VYKG + + +AVK+L+ ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWS 445
Q+F E+ ++AK QH NLV LLGF +G++ LVY ++PN SL L + L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 446 RRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQG 505
R KI G A GI +LHE+ IHRD+K++NILLD KISDFG+A+
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 506 NTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
RIVGT YMAPE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 131/221 (59%), Gaps = 15/221 (6%)
Query: 336 FDFETIEVATNNFST------DNKLGEGGFGEVYKGVLPSGQEIAVKRLSR----SSGQG 385
F F ++ TNNF NK GEGGFG VYKG + + +AVK+L+ ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWS 445
Q+F E+ + AK QH NLV LLGF +G++ LVY + PN SL L + L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 446 RRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQG 505
R KI G A GI +LHE+ IHRD+K++NILLD KISDFG+A+
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 506 NTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+RIVGT Y APE A+ G+ + KSD+YSFGV++LEIITG
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 144/233 (61%), Gaps = 6/233 (2%)
Query: 317 NAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK 376
N++ + + + + ES + +E ATNNF +G G FG+VYKGVL G ++A+K
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 377 RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP 436
R + S QG +EF+ E+ ++ +H +LV L+GFC E E IL+Y+++ N +L LY
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 437 E-KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
+ + W +R +I G ARG+ YLH + IIHRD+K+ NILLD PKI+DFG++
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 496 KIFGVDQTQGNTNRIV-GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
K G + Q + +V GT GY+ PEY + G+ + KSDVYSFGV++ E++ +
Sbjct: 187 KK-GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 144/233 (61%), Gaps = 6/233 (2%)
Query: 317 NAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK 376
N++ + + + + ES + +E ATNNF +G G FG+VYKGVL G ++A+K
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 377 RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP 436
R + S QG +EF+ E+ ++ +H +LV L+GFC E E IL+Y+++ N +L LY
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 437 E-KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
+ + W +R +I G ARG+ YLH + IIHRD+K+ NILLD PKI+DFG++
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 496 KIFGVDQTQGNTNRIV-GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
K G + Q + +V GT GY+ PEY + G+ + KSDVYSFGV++ E++ +
Sbjct: 187 KK-GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 124/228 (54%), Gaps = 10/228 (4%)
Query: 324 ADNDITTLESLQF----DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 379
+D DI T E+L F D + +++ + + K+G G FG V++ G ++AVK L
Sbjct: 11 SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 380 RSSGQGGQ--EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE 437
+ EF EV ++ +L+H N+V +G + +V E++ SL L++
Sbjct: 70 EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG 129
Query: 438 KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKI 497
++QLD RR + +A+G+ YLH + I+HR+LK+ N+L+D + K+ DFG++++
Sbjct: 130 AREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
T ++ GT +MAPE + KSDVYSFGV++ E+ T
Sbjct: 189 KA--STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 122/228 (53%), Gaps = 10/228 (4%)
Query: 324 ADNDITTLESLQF----DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLS 379
+D DI T E+L F D + +++ + + K+G G FG V++ G ++AVK L
Sbjct: 11 SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM 69
Query: 380 RSSGQGGQ--EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE 437
+ EF EV ++ +L+H N+V +G + +V E++ SL L++
Sbjct: 70 EQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG 129
Query: 438 KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKI 497
++QLD RR + +A+G+ YLH + I+HRDLK+ N+L+D + K+ DFG++++
Sbjct: 130 AREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ GT +MAPE + KSDVYSFGV++ E+ T
Sbjct: 189 KASXFLX--SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 127/221 (57%), Gaps = 21/221 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LG G FG VYKG+ +P G+ +A+K L+ ++G + EF +E +++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIARGILYLHE 463
LG CL + LV + +P+ L +++E + Q L+W + IA+G++YL E
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
R++HRDL A N+L+ + + KI+DFG+A++ D+ + N + +MA E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 524 HGQFSVKSDVYSFGVLVLEIIT-GKKNSSFYQTDGAADLLS 563
+ +F+ +SDV+S+GV + E++T G K T DLL
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 127/221 (57%), Gaps = 21/221 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LG G FG VYKG+ +P G+ +A+K L+ ++G + EF +E +++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPEK----QQQLDWSRRYKIIGGIARGILYLHE 463
LG CL + LV + +P+ L +++E + Q L+W + IA+G++YL E
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
R++HRDL A N+L+ + + KI+DFG+A++ D+ + N + +MA E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 524 HGQFSVKSDVYSFGVLVLEIIT-GKKNSSFYQTDGAADLLS 563
+ +F+ +SDV+S+GV + E++T G K T DLL
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 233
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 27/233 (11%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLV 396
+E+ + + +G GGFG+VY+ G E+AVK Q + + E L
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQL--DWSRRYKIIGGI 454
A L+H N++ L G CL+ LV EF L+ L + +W+ + I
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------I 114
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNP--------KISDFGMAKIFGVDQTQGN 506
ARG+ YLH+++ + IIHRDLK+SNIL+ ++ KI+DFG+A+ + +
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTT 170
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAA 559
G Y +MAPE FS SDV+S+GVL+ E++TG+ F DG A
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE--VPFRGIDGLA 221
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 26/232 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQEI--AVKRLSRSSGQGGQEFKNEVVL 395
+ +N +LGEG FG+V+ + P +I AVK L +S ++F E L
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY----------EPEKQQQLDWS 445
+ LQH ++V+ G C+EG+ I+V+E++ + L+ FL E +L S
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 446 RRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVD--Q 502
+ I IA G++YL + +HRDL N L+ + KI DFGM++ ++ D +
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 503 TQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
G+T + +M PE M+ +F+ +SDV+S GV++ EI T K +YQ
Sbjct: 186 VGGHTMLPI---RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ-PWYQ 233
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 348
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 348
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 158
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG+A++ D T R
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 24/221 (10%)
Query: 353 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
+LGEG FG+V+ +LP + +AVK L +S Q+F+ E L+ LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQ----------QQLDWSRRYKIIGGI 454
G C EG ++V+E++ + L+ FL + P+ + L + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGNTNRIVGT 513
A G++YL + L +HRDL N L+ + KI DFGM++ I+ D + R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 200
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+M PE ++ +F+ +SDV+SFGV++ EI T K +YQ
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-PWYQ 240
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 24/221 (10%)
Query: 353 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
+LGEG FG+V+ +LP + +AVK L +S Q+F+ E L+ LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQ----------QQLDWSRRYKIIGGI 454
G C EG ++V+E++ + L+ FL + P+ + L + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGNTNRIVGT 513
A G++YL + L +HRDL N L+ + KI DFGM++ I+ D + R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 194
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+M PE ++ +F+ +SDV+SFGV++ EI T K +YQ
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-PWYQ 234
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 15/211 (7%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
+ E+ + + KLG+G FGEV+ G +A+K L + + F E ++ K
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKK 318
Query: 399 LQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARG 457
L+H LV+L + + EE I +V E++ SL FL + E + L + + IA G
Sbjct: 319 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASG 375
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTY 514
+ Y+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I
Sbjct: 376 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI---- 428
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 69
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P +L ++ + IA G+ ++
Sbjct: 70 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 127
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 128 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEA 183
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVT 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 239 EKLVQL--YAVVSEEPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 348
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 24/221 (10%)
Query: 353 KLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
+LGEG FG+V+ +LP + +AVK L +S Q+F+ E L+ LQH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQ----------QQLDWSRRYKIIGGI 454
G C EG ++V+E++ + L+ FL + P+ + L + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGNTNRIVGT 513
A G++YL + L +HRDL N L+ + KI DFGM++ I+ D + R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 223
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+M PE ++ +F+ +SDV+SFGV++ EI T K +YQ
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-PWYQ 263
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 68
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P +L ++ + IA G+ ++
Sbjct: 69 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 126
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 127 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEA 182
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVT 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 62
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 63 EKLVQL--YAVVSEEPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT---QGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 120 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT---- 172
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P +L ++ + IA G+ ++
Sbjct: 68 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 125
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEA 181
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 158
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 159 GMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 61
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 62 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 118
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 119 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 171
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 66 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 122
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 175
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 129
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT-YG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 130 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P + L ++ + IA G+ ++
Sbjct: 68 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 125
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEA 181
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT---QGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 73
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P + L ++ + IA G+ ++
Sbjct: 74 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 131
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEA 187
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 76
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P + L ++ + IA G+ ++
Sbjct: 77 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 134
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 135 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEA 190
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 63
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 64 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 120
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 173
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 75
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P + L ++ + IA G+ ++
Sbjct: 76 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 133
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 134 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEA 189
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 62
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P +L ++ + IA G+ ++
Sbjct: 63 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 120
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 121 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEA 176
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P +L ++ + IA G+ ++
Sbjct: 68 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 125
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEA 181
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 146
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT-YG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 147 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 73
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P + L ++ + IA G+ ++
Sbjct: 74 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 131
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEA 187
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 158
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 158
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 158
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 156
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 157 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 72
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P +L ++ + IA G+ ++
Sbjct: 73 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 130
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 131 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEA 186
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 158
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 116/211 (54%), Gaps = 15/211 (7%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
+ E+ + + KLG+G FGEV+ G +A+K L + + F E ++ K
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKK 236
Query: 399 LQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARG 457
L+H LV+L + + EE I +V E++ SL FL + E + L + + IA G
Sbjct: 237 LRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASG 293
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTY 514
+ Y+ R+ +HRDL+A+NIL+ + K++DFG+ ++ ++ QG I T
Sbjct: 294 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWT- 349
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 350 ---APEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 77
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P + L ++ + IA G+ ++
Sbjct: 78 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 135
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHRDL+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 136 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEA 191
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E++ N SLD FL + + Q + + ++ GIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 158
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG+ ++ D T R
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT---- 179
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 131/246 (53%), Gaps = 35/246 (14%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG-------QEFKNEVV 394
+A N + ++G+GGFG V+KG L + + A+K L +G QEF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
+++ L H N+V+L G L +V EFVP L + L +K + WS + +++ I
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDI 131
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTNR 509
A GI Y+ ++ I+HRDL++ NI L +A + K++DFG+++ Q+ + +
Sbjct: 132 ALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSG 185
Query: 510 IVGTYGYMAPEY--AMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSI 567
++G + +MAPE A ++ K+D YSF +++ I+TG +G D SY I
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKI 236
Query: 568 NRVINL 573
+ IN+
Sbjct: 237 -KFINM 241
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 179
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ K++H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYFLYEPE---KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P LDY + Q L+W + IA
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++KL H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 198
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++KL H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 212
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++RL G + + ++V E + N SLD FL + + Q + + ++ GIA
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIAS 129
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT-YG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 130 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 121/233 (51%), Gaps = 28/233 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQEFKNEVVL 395
+ + +LGEG FG+V+ + P+ + +AVK L + ++F+ E L
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY------------EPEKQQ-QL 442
+ LQH ++V+ G C +G+ I+V+E++ + L+ FL +P + + +L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVD 501
S+ I IA G++YL + +HRDL N L+ A + KI DFGM++ ++ D
Sbjct: 131 GLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 502 --QTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSF 552
+ G+T + +M PE M+ +F+ +SDV+SFGV++ EI T K F
Sbjct: 188 YYRVGGHTMLPI---RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ L FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 116/213 (54%), Gaps = 17/213 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---G 453
+ H N++RL G + + ++V E + N SLD FL + + Q + +++G G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-----IQLVGMLRG 155
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG- 512
IA G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 156 IASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I ARG+ YL
Sbjct: 68 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYL 124
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L + KI DFG+A + ++ G+ +MAPE
Sbjct: 125 HAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 121
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 122 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVP-NKSLDYFLYEPE---KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P LDY + Q L+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + + KLG+G FGEV+ G +A+K L + + F E ++ KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ L FL + E + L + + IA G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYM 517
+ R+ +HRDL+A+NIL+ + K++DFG+A++ ++ QG I T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---- 182
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E+ T
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
+D + E+ + +LG G FGEV+ G + ++AVK L + Q F E L
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANL 61
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ LQH LVRL E ++ E++ SL FL E + L + IA
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIA 120
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
G+ Y+ R IHRDL+A+N+L+ + KI+DFG+A++ ++
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-K 176
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE G F++KSDV+SFG+L+ EI+T
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G FGEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P +L ++ + IA G+ ++
Sbjct: 64 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 121
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
E + IHR+L+A+NIL+ ++ KI+DFG+A++ ++ + APE
Sbjct: 122 EERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEA 177
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+G F++KSDV+SFG+L+ EI+T
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVT 201
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 125/239 (52%), Gaps = 28/239 (11%)
Query: 325 DNDITTLESLQFDFETIE--------VATNNFSTDNKLGEGGFGEVYKGV-LPSGQEI-- 373
D DI T E+L F + F LG G FG VYKG+ +P G+++
Sbjct: 11 DYDIPTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI 70
Query: 374 --AVKRLSR-SSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD 430
A+K L +S + +E +E ++A + + ++ RLLG CL + L+ + +P L
Sbjct: 71 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 129
Query: 431 YFLYEPE----KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN 486
++ E + Q L+W + IA+G+ YL ED RL +HRDL A N+L+ +
Sbjct: 130 DYVREHKDNIGSQYLLNWCVQ------IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQH 180
Query: 487 PKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
KI+DFG+AK+ G ++ + + +MA E +H ++ +SDV+S+GV V E++T
Sbjct: 181 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 116/213 (54%), Gaps = 17/213 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ N S D +G G FGEV G LPS +EI+V + G + ++F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---G 453
+ H N++RL G + + ++V E + N SLD FL + + Q + +++G G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-----IQLVGMLRG 155
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG- 512
IA G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +PE + +F+ SDV+S+G+++ E+++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 130/246 (52%), Gaps = 35/246 (14%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG-------QEFKNEVV 394
+A N + ++G+GGFG V+KG L + + A+K L +G QEF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
+++ L H N+V+L G L +V EFVP L + L +K + WS + +++ I
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDI 131
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTNR 509
A GI Y+ ++ I+HRDL++ NI L +A + K++DFG ++ Q+ + +
Sbjct: 132 ALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSG 185
Query: 510 IVGTYGYMAPEY--AMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSI 567
++G + +MAPE A ++ K+D YSF +++ I+TG +G D SY I
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKI 236
Query: 568 NRVINL 573
+ IN+
Sbjct: 237 -KFINM 241
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 133
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 134 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 137
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 138 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 197
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 8/225 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + KLG G FGEV+ G + ++AVK L + Q F E L+ LQH
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
LVRL + E ++ EF+ SL FL E + L + IA G+ Y+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYI 125
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
R IHRDL+A+N+L+ + KI+DFG+A++ ++ + APE
Sbjct: 126 E---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEA 181
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
G F++KS+V+SFG+L+ EI+T K Y AD++S +S
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVTYGKIP--YPGRTNADVMSALS 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 25/225 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSG----QEIAVKRLS-RSSGQGGQEFKNEVV 394
E++ + +LGE FG+VYKG L P+ Q +A+K L ++ G +EF++E +
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQL---DWSRRYK-- 449
L A+LQH N+V LLG + + +++ + + L FL + D R K
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 450 --------IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGV 500
++ IA G+ YL S ++H+DL N+L+ ++N KISD G+ + ++
Sbjct: 142 LEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 501 DQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
D + N ++ +MAPE M+G+FS+ SD++S+GV++ E+ +
Sbjct: 199 DYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 198
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 138 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 189
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 124
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 125 EGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 212
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 197
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG AK+ G ++ + +
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 15/208 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + +LG G FGEV+ G ++A+K L + + F E ++ KL+H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKH 63
Query: 402 RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
LV+L + + EE I +V E++ SL FL + E + L + +A G+ Y
Sbjct: 64 DKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAY 120
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT---QGNTNRIVGTYGYM 517
+ R+ IHRDL+++NIL+ + KI+DFG+A++ ++ QG I T
Sbjct: 121 IE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT---- 173
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT 545
APE A++G+F++KSDV+SFG+L+ E++T
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 153 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 204
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 205 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D +
Sbjct: 187 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAG 238
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 239 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 11/206 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
EV +LG G GEV+ G ++AVK L + S F E L+ +LQH
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQH 67
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+ LVRL + E ++ E++ N SL FL P + L ++ + IA G+ ++
Sbjct: 68 QRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFI 125
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY--GYMAP 519
E + IHRDL+A+NIL+ ++ KI+DFG+A++ + T R + + AP
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAP 179
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E +G F++KSDV+SFG+L+ EI+T
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 163 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 214
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 215 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 64 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 120
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 121/220 (55%), Gaps = 25/220 (11%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG-------QEFKNEVV 394
+A N + ++G+GGFG V+KG L + + A+K L +G QEF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
+++ L H N+V+L G L +V EFVP L + L +K + WS + +++ I
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDI 131
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTNR 509
A GI Y+ ++ I+HRDL++ NI L +A + K++DF +++ Q+ + +
Sbjct: 132 ALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSG 185
Query: 510 IVGTYGYMAPEY--AMHGQFSVKSDVYSFGVLVLEIITGK 547
++G + +MAPE A ++ K+D YSF +++ I+TG+
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 66 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 122
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE
Sbjct: 123 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 25/225 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSG----QEIAVKRLS-RSSGQGGQEFKNEVV 394
E++ + +LGE FG+VYKG L P+ Q +A+K L ++ G +EF++E +
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQL---DWSRRYK-- 449
L A+LQH N+V LLG + + +++ + + L FL + D R K
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 450 --------IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGV 500
++ IA G+ YL S ++H+DL N+L+ ++N KISD G+ + ++
Sbjct: 125 LEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 501 DQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
D + N ++ +MAPE M+G+FS+ SD++S+GV++ E+ +
Sbjct: 182 DYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 69 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 125
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE
Sbjct: 126 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQ----DIYRAS 198
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 69 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 125
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE
Sbjct: 126 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 119/217 (54%), Gaps = 20/217 (9%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLP--SGQE---IAVKRLSRSSGQGGQ-EFKNEV 393
T E+ + + +G G FGEVYKG+L SG++ +A+K L + + +F E
Sbjct: 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 97
Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
++ + H N++RL G + + +++ E++ N +LD FL E K + + ++ G
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRG 155
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ-----TQGNTN 508
IA G+ YL + + +HRDL A NIL+++ + K+SDFG++++ D T G
Sbjct: 156 IAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 509 RIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
I T APE + +F+ SDV+SFG+++ E++T
Sbjct: 213 PIRWT----APEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 16/202 (7%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRL 407
LGEG FG+V +G+++AVK L SG + K E+ ++ L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 408 LGFCLE--GEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C E G L+ EF+P+ SL +L P+ + +++ ++ K I +G+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 132
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT--NRIVGTYGYMAPEYAM 523
R + +HRDL A N+L+++E KI DFG+ K D+ +R + Y APE M
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 190
Query: 524 HGQFSVKSDVYSFGVLVLEIIT 545
+F + SDV+SFGV + E++T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG AK+ G ++ + +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRS-SGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 212
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG AK+ G ++ + +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 16/202 (7%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRL 407
LGEG FG+V +G+++AVK L SG + K E+ ++ L H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 408 LGFCLE--GEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C E G L+ EF+P+ SL +L P+ + +++ ++ K I +G+ YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 144
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT--NRIVGTYGYMAPEYAM 523
R + +HRDL A N+L+++E KI DFG+ K D+ +R + Y APE M
Sbjct: 145 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 202
Query: 524 HGQFSVKSDVYSFGVLVLEIIT 545
+F + SDV+SFGV + E++T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG AK+ G ++ + +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG AK+ G ++ + +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D +
Sbjct: 164 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAG 215
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 216 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSR-SSGQGGQEFKNEVV 394
EV N + LG G FGEVY+G + PS ++AVK L S Q +F E +
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE----PEKQQQLDWSRRYKI 450
+++K H+N+VR +G L+ + ++ E + L FL E P + L +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGN 506
IA G YL E+ IHRD+ A N LL P KI DFGMA+ D + +
Sbjct: 173 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 224
Query: 507 TNRIVG----TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
R G +M PE M G F+ K+D +SFGVL+ EI +
Sbjct: 225 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG AK+ G ++ + +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 91 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 147
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE
Sbjct: 148 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 204
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 64 VNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 120
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 92 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 148
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A + ++ G+ +MAPE
Sbjct: 149 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F L G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F L G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSRS-SGQGGQEFKNEVVLVAKL 399
F L G FG VYKG+ +P G+++ A+K L + S + +E +E ++A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I ARG+ YL
Sbjct: 80 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYL 136
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L + KI DFG+A ++ G+ +MAPE
Sbjct: 137 HAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 20/210 (9%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEI----AVKRLSR-SSGQGGQEFKNEVVLVAKL 399
F LG G FG VYKG+ +P G+++ A+ L +S + +E +E ++A +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIA 455
+ ++ RLLG CL + L+ + +P L ++ E + Q L+W + IA
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 161
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL ED RL +HRDL A N+L+ + KI+DFG+AK+ G ++ + +
Sbjct: 162 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MA E +H ++ +SDV+S+GV V E++T
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ EF+P SL +L + ++++D + + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + I V ++ SL + L+ E + ++ + I ARG+ YL
Sbjct: 80 VNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYL 136
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L + KI DFG+A ++ G+ +MAPE
Sbjct: 137 HAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 113/202 (55%), Gaps = 20/202 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQ----EIAVKRLSR-SSGQGGQEFKNEVVLVAKLQHRNLVRL 407
LG G FG VYKG+ +P G+ +A+K L +S + +E +E ++A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIARGILYLHE 463
LG CL + LV + +P L + E Q L+W + IA+G+ YL +
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED 137
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
+R++HRDL A N+L+ + + KI+DFG+A++ +D+T+ + + +MA E +
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 524 HGQFSVKSDVYSFGVLVLEIIT 545
+F+ +SDV+S+GV V E++T
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 64 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 120
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A ++ G+ +MAPE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 84 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 140
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A ++ G+ +MAPE
Sbjct: 141 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 197
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
++ + E+ + + KLG G FGEV+ ++AVK + S + F E +
Sbjct: 5 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANV 63
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQ-----LDWSRRYKI 450
+ LQH LV+L + E ++ EF+ SL FL E +Q +D+S
Sbjct: 64 MKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS----- 117
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI 510
IA G+ ++ + + IHRDL+A+NIL+ A + KI+DFG+A++ ++
Sbjct: 118 -AQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 173
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE G F++KSDV+SFG+L++EI+T
Sbjct: 174 F-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 21/217 (9%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
++ + E+ + + KLG G FGEV+ ++AVK + S + F E +
Sbjct: 178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANV 236
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQ-----LDWSRRYKI 450
+ LQH LV+L + E ++ EF+ SL FL E +Q +D+S +
Sbjct: 237 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--- 292
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI 510
IA G+ ++ + + IHRDL+A+NIL+ A + KI+DFG+A++ + T R
Sbjct: 293 ---IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTARE 343
Query: 511 VGTY--GYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ + APE G F++KSDV+SFG+L++EI+T
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 162
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 130
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 135
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 9/209 (4%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + Q Q FKNEV ++ K +H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++ +G+ + + I V ++ SL + L+ E + ++ + I A+G+ YL
Sbjct: 92 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYL 148
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H S IIHRDLK++NI L ++ KI DFG+A ++ G+ +MAPE
Sbjct: 149 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 522 AM---HGQFSVKSDVYSFGVLVLEIITGK 547
+S +SDVY+FG+++ E++TG+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 129
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 137
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 138
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 7/218 (3%)
Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQ 387
T+++ +++ E+ + + +KLG G +GEVY+GV +AVK L + + +
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-E 59
Query: 388 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRR 447
EF E ++ +++H NLV+LLG C ++ EF+ +L +L E +Q+
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
Y + I+ + YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 120 Y-MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 176 GAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 7/218 (3%)
Query: 329 TTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQ 387
T+++ +++ E+ + + +KLG G +GEVY+GV +AVK L + + +
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-E 59
Query: 388 EFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRR 447
EF E ++ +++H NLV+LLG C ++ EF+ +L +L E +Q+
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
Y + I+ + YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 120 Y-MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 176 GAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 27/215 (12%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
++ + E+ + + KLG G FGEV+ ++AVK + S + F E +
Sbjct: 172 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANV 230
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQ-----LDWSRRYKI 450
+ LQH LV+L + E ++ EF+ SL FL E +Q +D+S +
Sbjct: 231 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--- 286
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI 510
IA G+ ++ + + IHRDL+A+NIL+ A + KI+DFG+A++ G I
Sbjct: 287 ---IAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV-------GAKFPI 333
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
T APE G F++KSDV+SFG+L++EI+T
Sbjct: 334 KWT----APEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 408 LGFCLEGEEK--ILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
G C + L+ E++P SL DY E+ +D + + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYL--- 133
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAM 523
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 524 HGQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 126
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-K 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 121
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 177
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 121
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 177
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 17/213 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
E+ + ++G G FG VYKG + + ++ + + Q F+NEV ++ K +H
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQ----QQLDWSRRYKIIGGIARG 457
N++ +G+ + + +V ++ SL L+ E + Q +D +R+ A+G
Sbjct: 92 VNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ------TAQG 144
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYM 517
+ YLH + IIHRD+K++NI L + KI DFG+A + + G+ +M
Sbjct: 145 MDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWM 201
Query: 518 APEYAM---HGQFSVKSDVYSFGVLVLEIITGK 547
APE + FS +SDVYS+G+++ E++TG+
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ + + +KLG G FGEVY+GV +AVK L + + +EF E ++ +++
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 65
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+ + Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEY 124
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
L + + IHRDL A N L+ K++DFG++++ D + + APE
Sbjct: 125 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPE 180
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS+KSDV++FGVL+ EI T
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQIS 121
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 177
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 66
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 125
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 126 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 181
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQIS 121
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 177
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 63
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 122
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-K 178
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQIS 126
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQIS 121
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 177
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQIS 121
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 177
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 14/225 (6%)
Query: 347 NFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGG---QEFKNEVVLVAKLQHR 402
+F N LG+G F VY+ + +G E+A+K + + + Q +NEV + +L+H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
+++ L + + LV E N ++ +L K + +R + + I G+LYLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLH 129
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
I+HRDL SN+LL MN KI+DFG+A + + T + GT Y++PE A
Sbjct: 130 SHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIA 184
Query: 523 MHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSI 567
++SDV+S G + ++ G+ + TD + L+ V +
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPP---FDTDTVKNTLNKVVL 226
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ + + +KLG G +GEVY+GV +AVK L + + +EF E ++ +++
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 65
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+ + Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEY 124
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
L + + IHRDL A N L+ K++DFG++++ D + + APE
Sbjct: 125 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPE 180
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS+KSDV++FGVL+ EI T
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHRDL NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 75
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 134
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 135 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 190
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 126
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 123
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 179
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 123
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-K 179
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 33/233 (14%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYK----GVLP--SGQEIAVKRLSRSSGQGGQ-EFKNEVV 394
E NN +GEG FG V++ G+LP +AVK L + Q +F+ E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL---DWSRRYK 449
L+A+ + N+V+LLG C G+ L++E++ L+ FL P L D S R +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 450 ----------------IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
I +A G+ YL E + +HRDL N L+ M KI+DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFG 219
Query: 494 MAK-IFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+++ I+ D + + N + +M PE + +++ +SDV+++GV++ EI +
Sbjct: 220 LSRNIYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 332 ESLQFD-FETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEF 389
E+L F + E+ + + +KLG G +GEVY GV +AVK L + + +EF
Sbjct: 17 ENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEF 75
Query: 390 KNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYK 449
E ++ +++H NLV+LLG C +V E++P +L +L E +++ Y
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY- 134
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
+ I+ + YL + + IHRDL A N L+ K++DFG++++ D +
Sbjct: 135 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGA 191
Query: 510 IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + FS+KSDV++FGVL+ EI T
Sbjct: 192 KFPI-KWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 353 KLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+LG+G FG V Y + +G+ +AVK+L S+ + ++F+ E+ ++ LQH N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 408 LGFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + L+ E++P SL +L + ++++D + + I +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 132
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMH 524
R IHR+L NIL++ E KI DFG+ K+ D+ + APE
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 525 GQFSVKSDVYSFGVLVLEIIT 545
+FSV SDV+SFGV++ E+ T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 63
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 122
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-K 178
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ + + +G G FGEV G LP +EI V + SG + ++F +E ++
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 88
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++ L G + +++ EF+ N SLD FL + + Q + + ++ GIA
Sbjct: 89 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAA 146
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG---T 513
G+ YL + + +HRDL A NIL+++ + K+SDFG+++ D + +G
Sbjct: 147 GMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 203
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +F+ SDV+S+G+++ E+++
Sbjct: 204 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 64
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 123
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHRDL A N L+ K++DFG++++ D
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-K 179
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
++G G FG V+ G + ++A+K + R ++F E ++ KL H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---GIARGILYLHEDSRLR 468
LE LV+EF+ + L +L + Q ++G + G+ YL E S
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAS--- 123
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFS 528
+IHRDL A N L+ K+SDFGM + DQ +T + +PE ++S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 182
Query: 529 VKSDVYSFGVLVLEIITGKK 548
KSDV+SFGVL+ E+ + K
Sbjct: 183 SKSDVWSFGVLMWEVFSEGK 202
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ + + +KLG G +GEVY+GV +AVK L + + +EF E ++ +++
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 65
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+ + Y
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEY 124
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
L + + IHRDL A N L+ K++DFG++++ D + + APE
Sbjct: 125 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPE 180
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS+KSDV++FGVL+ EI T
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 330 TLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQE 388
T+ + +++ E+ + + +KLG G +GEVY+GV +AVK L + + +E
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EE 262
Query: 389 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY 448
F E ++ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 322
Query: 449 KIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTN 508
+ I+ + YL + + IHR+L A N L+ K++DFG++++ D +
Sbjct: 323 -MATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 509 RIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 379 AKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 25/219 (11%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVV 394
T E+ + + +G G GEV G L P +++ V + +G + ++F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG-- 452
++ + H N++RL G G ++V E++ N SLD FL + Q + +++G
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI-----MQLVGML 157
Query: 453 -GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
G+ G+ YL S L +HRDL A N+L+D+ + K+SDFG++++ D T
Sbjct: 158 RGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT--- 211
Query: 512 GTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
T G + APE FS SDV+SFGV++ E++
Sbjct: 212 -TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 132 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 189 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 191 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 191
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 192 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 185 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 198 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 191
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ + +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 191 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 163 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 219
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 220 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 25/219 (11%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVV 394
T E+ + + +G G GEV G L P +++ V + +G + ++F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG-- 452
++ + H N++RL G G ++V E++ N SLD FL + Q + +++G
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI-----MQLVGML 157
Query: 453 -GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
G+ G+ YL S L +HRDL A N+L+D+ + K+SDFG++++ D T
Sbjct: 158 RGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT--- 211
Query: 512 GTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
T G + APE FS SDV+SFGV++ E++
Sbjct: 212 -TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 308
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 367
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHR+L A N L+ K++DFG++++ D +
Sbjct: 368 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIK 423
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVL 395
+++ E+ + + +KLG G +GEVY+GV +AVK L + + +EF E +
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 266
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H NLV+LLG C ++ EF+ +L +L E +Q+ Y + I+
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQIS 325
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YL + + IHR+L A N L+ K++DFG++++ D +
Sbjct: 326 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIK 381
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +FS+KSDV++FGVL+ EI T
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM +
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ + +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
++G G FG V+ G + ++A+K + R ++F E ++ KL H LV+L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---GIARGILYLHEDSRLR 468
LE LV+EF+ + L +L + Q ++G + G+ YL E
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 121
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFS 528
+IHRDL A N L+ K+SDFGM + DQ +T + +PE ++S
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 180
Query: 529 VKSDVYSFGVLVLEIITGKK 548
KSDV+SFGVL+ E+ + K
Sbjct: 181 SKSDVWSFGVLMWEVFSEGK 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
++G G FG V+ G + ++A+K + R ++F E ++ KL H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---GIARGILYLHEDSRLR 468
LE LV+EF+ + L +L + Q ++G + G+ YL E
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 123
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFS 528
+IHRDL A N L+ K+SDFGM + DQ +T + +PE ++S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 182
Query: 529 VKSDVYSFGVLVLEIITGKK 548
KSDV+SFGVL+ E+ + K
Sbjct: 183 SKSDVWSFGVLMWEVFSEGK 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 20/202 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAV----KRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LG G FG V+KGV +P G+ I + K + SG Q Q + ++ + L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIARGILYLHE 463
LG C G LV +++P SL + + Q L+W + IA+G+ YL E
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 133
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
++HR+L A N+LL + +++DFG+A + D Q + +MA E
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 524 HGQFSVKSDVYSFGVLVLEIIT 545
G+++ +SDV+S+GV V E++T
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMT 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
++G G FG V+ G + ++A+K + R ++F E ++ KL H LV+L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---GIARGILYLHEDSRLR 468
LE LV+EF+ + L +L + Q ++G + G+ YL E
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 126
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFS 528
+IHRDL A N L+ K+SDFGM + DQ +T + +PE ++S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 185
Query: 529 VKSDVYSFGVLVLEIITGKK 548
KSDV+SFGVL+ E+ + K
Sbjct: 186 SKSDVWSFGVLMWEVFSEGK 205
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 20/202 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAV----KRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LG G FG V+KGV +P G+ I + K + SG Q Q + ++ + L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPE----KQQQLDWSRRYKIIGGIARGILYLHE 463
LG C G LV +++P SL + + Q L+W + IA+G+ YL E
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 151
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
++HR+L A N+LL + +++DFG+A + D Q + +MA E
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 524 HGQFSVKSDVYSFGVLVLEIIT 545
G+++ +SDV+S+GV V E++T
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMT 230
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + A L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 114/213 (53%), Gaps = 17/213 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ + + +G G FGEV G L P +EI V + +G + ++F +E ++
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---G 453
+ H N++ L G + + +++ E++ N SLD FL + + + + +++G G
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-----IQLVGMLRG 139
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG- 512
I G+ YL S + +HRDL A NIL+++ + K+SDFGM+++ D T R
Sbjct: 140 IGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 196
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +F+ SDV+S+G+++ E+++
Sbjct: 197 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLG 409
K+GEG +G VYK G+ +A+KR+ + G E+ L+ +L H N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
LV+EF+ K L L E + Q + Y + + RG+ + H+ RI
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQH---RI 140
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM-HGQFS 528
+HRDLK N+L++++ K++DFG+A+ FG+ + T+ +V T Y AP+ M ++S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 529 VKSDVYSFGVLVLEIITGK 547
D++S G + E+ITGK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 114/213 (53%), Gaps = 17/213 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ + + +G G FGEV G L P +EI V + +G + ++F +E ++
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---G 453
+ H N++ L G + + +++ E++ N SLD FL + + + + +++G G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-----IQLVGMLRG 118
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I G+ YL S + +HRDL A NIL+++ + K+SDFGM+++ D T R
Sbjct: 119 IGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
Query: 514 -YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +F+ SDV+S+G+++ E+++
Sbjct: 176 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLG 409
K+GEG +G VYK G+ +A+KR+ + G E+ L+ +L H N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
LV+EF+ K L L E + Q + Y + + RG+ + H+ RI
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQH---RI 140
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM-HGQFS 528
+HRDLK N+L++++ K++DFG+A+ FG+ + T+ +V T Y AP+ M ++S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 529 VKSDVYSFGVLVLEIITGK 547
D++S G + E+ITGK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L PE + S+
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N + + KI DFGM + I+ D +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 185 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 114/213 (53%), Gaps = 17/213 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ + + +G G FGEV G L P +EI V + +G + ++F +E ++
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---G 453
+ H N++ L G + + +++ E++ N SLD FL + + + + +++G G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-----IQLVGMLRG 124
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I G+ YL S + +HRDL A NIL+++ + K+SDFGM+++ D T R
Sbjct: 125 IGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
Query: 514 -YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +F+ SDV+S+G+++ E+++
Sbjct: 182 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 112/212 (52%), Gaps = 13/212 (6%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ + + +G G FGEV G LP +EI V + SG + ++F +E ++
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++ L G + +++ EF+ N SLD FL + + Q + + ++ GIA
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAA 120
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG---T 513
G+ YL + + +HR L A NIL+++ + K+SDFG+++ D + +G
Sbjct: 121 GMKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 177
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +F+ SDV+S+G+++ E+++
Sbjct: 178 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 114/210 (54%), Gaps = 11/210 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQE--IAVKRLSRS-SGQGGQEFKNEVVLV 396
E+ + + + +G G FGEV G LP +E +A+K L + + ++F E ++
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N++ L G + + ++V E++ N SLD FL + + Q + + ++ GI+
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISA 135
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG-TYG 515
G+ YL S + +HRDL A NIL+++ + K+SDFG++++ D T R
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE +F+ SDV+S+G+++ E+++
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 29/220 (13%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQE--IAVKRLSRSSGQGG------QEFKN 391
E+ + + +G G FGEV +G L P +E +A+K L +GG +EF +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-----KGGYTERQRREFLS 66
Query: 392 EVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
E ++ + +H N++RL G +++ EF+ N +LD FL + Q + +++
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV-----IQLV 121
Query: 452 G---GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTN 508
G GIA G+ YL E + +HRDL A NIL+++ + K+SDFG+++ + +
Sbjct: 122 GMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 509 RIVG---TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+G + APE +F+ SD +S+G+++ E+++
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 29/220 (13%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL--PSGQE--IAVKRLSRSSGQGG------QEFKN 391
E+ + + +G G FGEV +G L P +E +A+K L +GG +EF +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-----KGGYTERQRREFLS 64
Query: 392 EVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
E ++ + +H N++RL G +++ EF+ N +LD FL + Q + +++
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV-----IQLV 119
Query: 452 G---GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTN 508
G GIA G+ YL E + +HRDL A NIL+++ + K+SDFG+++ + +
Sbjct: 120 GMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 509 RIVG---TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+G + APE +F+ SD +S+G+++ E+++
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
++G G FG V+ G + ++A+K + R ++F E ++ KL H LV+L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---GIARGILYLHEDSRLR 468
LE LV EF+ + L +L + Q ++G + G+ YL E
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 124
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFS 528
+IHRDL A N L+ K+SDFGM + DQ +T + +PE ++S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 183
Query: 529 VKSDVYSFGVLVLEIITGKK 548
KSDV+SFGVL+ E+ + K
Sbjct: 184 SKSDVWSFGVLMWEVFSEGK 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLHG-- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 109/196 (55%), Gaps = 10/196 (5%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+G+G G VY + + +GQE+A+++++ + NE++++ + ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
L G+E +V E++ SL + E +D + + + + +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS 531
RD+K+ NILL + + K++DFG +Q++ +T +VGT +MAPE + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKV 197
Query: 532 DVYSFGVLVLEIITGK 547
D++S G++ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLHG-- 121
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 122 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 121
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 121
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 121
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 121
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 121
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 121
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLHG-- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLHG-- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + E K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L P S+
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 198 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCL 412
LG+G FG+ K +G+ + +K L R + + F EV ++ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 413 EGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHR 472
+ + + E++ +L + Q WS+R IA G+ YLH + IIHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 473 DLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR------------IVGTYGYMAPE 520
DL + N L+ N ++DFG+A++ ++TQ R +VG +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITGKKNSS 551
+ K DV+SFG+++ EII G+ N+
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY----KGVLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EVA + +LG+G FG VY KGV+ E +A+K ++ ++ + EF NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--YEPEKQQQL-----DWSRR 447
++ + ++VRLLG +G+ +++ E + L +L P S+
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ G IA G+ YL+ + + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 131 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 187
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +M+PE G F+ SDV+SFGV++ EI T
Sbjct: 188 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 115/215 (53%), Gaps = 21/215 (9%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSG---QGGQEFKNEVVLV 396
E+ + + +G G FGEV G LP +++AV + G + ++F E ++
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H N+V L G G+ ++V EF+ N +LD FL + + Q + + ++ GIA
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAA 156
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG- 515
G+ YL + + +HRDL A NIL+++ + K+SDFG++++ + + + T G
Sbjct: 157 GMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVI-----EDDPEAVYTTTGG 208
Query: 516 -----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ APE + +F+ SDV+S+G+++ E+++
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLHG-- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
++G G FG V+ G + ++A+K + S +F E ++ KL H LV+L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG---GIARGILYLHEDSRLR 468
LE LV+EF+ + L +L + Q ++G + G+ YL E
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 143
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFS 528
+IHRDL A N L+ K+SDFGM + DQ +T + +PE ++S
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 202
Query: 529 VKSDVYSFGVLVLEIITGKK 548
KSDV+SFGVL+ E+ + K
Sbjct: 203 SKSDVWSFGVLMWEVFSEGK 222
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLH--- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 318 AVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVK 376
+ PE N + ++ + + + + + + A +F LG+G FG VY + I A+K
Sbjct: 7 SAPENNPEEELASKQKNE-ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK 65
Query: 377 RLSRSSGQGG---QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
L ++ + + + EV + + L+H N++RL G+ + L+ E+ P L
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVY 122
Query: 434 YEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
E +K + D R I +A + Y H R+IHRD+K N+LL + KI+DFG
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSS 551
+ V + + GT Y+ PE K D++S GVL E + GK ++
Sbjct: 180 ----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 552 FYQ-----------------TDGAADLLS 563
YQ T+GA DL+S
Sbjct: 236 TYQETYKRISRVEFTFPDFVTEGARDLIS 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG +GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLHG-- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 13/206 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQ---EIAVKRLSRSSGQGG-QEFKNEVVLVAKLQH 401
N D +LG G FG V +GV + ++A+K L + + + +E E ++ +L +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+VRL+G C + E +LV E L FL K++++ S +++ ++ G+ YL
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYL 126
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY--GYMAP 519
E + +HRDL A N+LL KISDFG++K G D + T R G + + AP
Sbjct: 127 EEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAP 182
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E +FS +SDV+S+GV + E ++
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 318 AVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVK 376
+ PE N + ++ + + + + + + A +F LG+G FG VY + I A+K
Sbjct: 7 SAPENNPEEELASKQKNE-ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK 65
Query: 377 RLSRSSGQGG---QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
L ++ + + + EV + + L+H N++RL G+ + L+ E+ P L
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVY 122
Query: 434 YEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
E +K + D R I +A + Y H R+IHRD+K N+LL + KI+DFG
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSS 551
+ V + GT Y+ PE K D++S GVL E + GK ++
Sbjct: 180 ----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Query: 552 FYQ-----------------TDGAADLLS 563
YQ T+GA DL+S
Sbjct: 236 TYQETYKRISRVEFTFPDFVTEGARDLIS 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN---EVVLVAKLQHRN 403
FS ++G G FG VY + + + +A+K++S S Q +++++ EV + KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
++ G L LV E+ + D + Q+++ + + G +G+ YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA---AVTHGALQGLAYLHS 172
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
+ +IHRD+KA NILL K+ DFG A I N VGT +MAPE +
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 524 ---HGQFSVKSDVYSFGVLVLEIITGK 547
GQ+ K DV+S G+ +E+ K
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+G+G G VY + + +GQE+A+++++ + NE++++ + ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
L G+E +V E++ SL + E +D + + + + +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS 531
RD+K+ NILL + + K++DFG +Q++ + +VGT +MAPE + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 532 DVYSFGVLVLEIITGK 547
D++S G++ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN---EVVLVAKLQHRN 403
FS ++G G FG VY + + + +A+K++S S Q +++++ EV + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
++ G L LV E+ + D + Q+++ + + G +G+ YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA---AVTHGALQGLAYLHS 133
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
+ +IHRD+KA NILL K+ DFG A I N VGT +MAPE +
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184
Query: 524 ---HGQFSVKSDVYSFGVLVLEIITGK 547
GQ+ K DV+S G+ +E+ K
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LGEG GEV V +E +AVK + + + + K E+ + L H N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 412 LEGEEKILVYEFVPNKSL------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
EG + L E+ L D + EP+ Q + + G++YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---------RFFHQLMAGVVYLHG-- 122
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K N+LLD N KISDFG+A +F + + N++ GT Y+APE
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 526 QFSVKS-DVYSFGVLVLEIITGK 547
+F + DV+S G+++ ++ G+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 112/207 (54%), Gaps = 13/207 (6%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLV 405
F+ +++G+G FGEVYKG+ +E+ A+K + + ++ + E+ ++++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 406 RLLGFCLEGEEKILVYEFVPNKS-LDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
R G L+ + ++ E++ S LD K L+ + I+ I +G+ YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSE 135
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
R IHRD+KA+N+LL + + K++DFG+A + TQ N VGT +MAPE
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 525 GQFSVKSDVYSFGVLVLEIITGKKNSS 551
+ K+D++S G+ +E+ G+ +S
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNS 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+G+G G VY + + +GQE+A+++++ + NE++++ + ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
L G+E +V E++ SL + E +D + + + + +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS 531
RD+K+ NILL + + K++DFG +Q++ + +VGT +MAPE + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 532 DVYSFGVLVLEIITGK 547
D++S G++ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+G+G G VY + + +GQE+A+++++ + NE++++ + ++ N+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
L G+E +V E++ SL + E +D + + + + +LH + ++IH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS 531
RD+K+ NILL + + K++DFG +Q++ + +VGT +MAPE + K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 532 DVYSFGVLVLEIITGK 547
D++S G++ +E+I G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 109/196 (55%), Gaps = 10/196 (5%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+G+G G VY + + +GQE+A+++++ + NE++++ + ++ N+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
L G+E +V E++ SL + E +D + + + + +LH + ++IH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS 531
R++K+ NILL + + K++DFG +Q++ +T +VGT +MAPE + K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKV 198
Query: 532 DVYSFGVLVLEIITGK 547
D++S G++ +E+I G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
KLGEG +GEVYK + + + +A+KR+ G G + EV L+ +LQHRN++ L
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKELQHRNIIEL 98
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
L++E+ N Y P+ ++ S Y++I G+ + H SR
Sbjct: 99 KSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN----FCH--SR- 151
Query: 468 RIIHRDLKASNILL---DAEMNP--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R +HRDLK N+LL DA P KI DFG+A+ FG+ Q T+ I+ T Y PE
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF-THEII-TLWYRPPEIL 209
Query: 523 MHGQ-FSVKSDVYSFGVLVLEII 544
+ + +S D++S + E++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEML 232
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 13/206 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQ---EIAVKRLSRSSGQGG-QEFKNEVVLVAKLQH 401
N D +LG G FG V +GV + ++A+K L + + + +E E ++ +L +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 395
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
+VRL+G C + E +LV E L FL K++++ S +++ ++ G+ YL
Sbjct: 396 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYL 452
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY--GYMAP 519
E + +HR+L A N+LL KISDFG++K G D + T R G + + AP
Sbjct: 453 EEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAP 508
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E +FS +SDV+S+GV + E ++
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPP 176
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
Query: 561 LLS 563
L+S
Sbjct: 237 LIS 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 10/196 (5%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V SG+++AVK + Q + NEVV++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
L GEE ++ EF+ +L + Q +L+ + + + + + YLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS 531
RD+K+ +ILL + K+SDFG D + +VGT +MAPE ++ +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEV 222
Query: 532 DVYSFGVLVLEIITGK 547
D++S G++V+E++ G+
Sbjct: 223 DIWSLGIMVIEMVDGE 238
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 561 LLS 563
L+S
Sbjct: 239 LIS 241
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 12/212 (5%)
Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRL---SRSSGQGGQEFKNEVVLVAKLQHR 402
NF + K+G G F EVY+ L G +A+K++ + + E+ L+ +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRR-YKIIGGIARGILYL 461
N+++ +E E +V E L + +KQ++L R +K + + ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H SR R++HRD+K +N+ + A K+ D G+ + F T ++ +VGT YM+PE
Sbjct: 153 H--SR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 207
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 553
++ KSD++S G L+ E+ S FY
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEM--AALQSPFY 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 21/206 (10%)
Query: 352 NKLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
++LG+G FG V Y + +G +AVK+L S ++F+ E+ ++ L +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 407 LLGFCL-EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
G G ++ LV E++P+ L FL + +LD SR I +G+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL--G 128
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAP 519
SR R +HRDL A NIL+++E + KI+DFG+AK+ +D+ +V G + AP
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DXXVVREPGQSPIFWYAP 183
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E FS +SDV+SFGV++ E+ T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 112/207 (54%), Gaps = 13/207 (6%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLV 405
F+ ++G+G FGEV+KG+ Q++ A+K + + ++ + E+ ++++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 406 RLLGFCLEGEEKILVYEFVPNKS-LDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ G L+G + ++ E++ S LD P + Q+ ++ I +G+ YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI-----ATMLKEILKGLDYLHSE 139
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
+ IHRD+KA+N+LL + + K++DFG+A + TQ N VGT +MAPE
Sbjct: 140 KK---IHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 525 GQFSVKSDVYSFGVLVLEIITGKKNSS 551
+ K+D++S G+ +E+ G+ +S
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNS 221
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
F KLGEG +G VYK + +GQ +A+K++ S QE E+ ++ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSR 466
G + + +V E+ S+ + + + L I+ +G+ YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 467 LRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQ 526
+R IHRD+KA NILL+ E + K++DFG+A + N ++GT +MAPE
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAG--QLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 527 FSVKSDVYSFGVLVLEIITGK 547
++ +D++S G+ +E+ GK
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 21/206 (10%)
Query: 352 NKLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
++LG+G FG V Y + +G +AVK+L S ++F+ E+ ++ L +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 407 LLGFCL-EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
G G + + LV E++P+ L FL + +LD SR I +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL--G 144
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAP 519
SR R +HRDL A NIL+++E + KI+DFG+AK+ +D+ +V G + AP
Sbjct: 145 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAP 199
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E FS +SDV+SFGV++ E+ T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 561 LLS 563
L+S
Sbjct: 241 LIS 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 21/206 (10%)
Query: 352 NKLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
++LG+G FG V Y + +G +AVK+L S ++F+ E+ ++ L +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 407 LLGFCL-EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
G G + + LV E++P+ L FL + +LD SR I +G+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL--G 132
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAP 519
SR R +HRDL A NIL+++E + KI+DFG+AK+ +D+ +V G + AP
Sbjct: 133 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAP 187
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E FS +SDV+SFGV++ E+ T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 180
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 561 LLS 563
L+S
Sbjct: 241 LIS 243
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 21/206 (10%)
Query: 352 NKLGEGGFGEV----YKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
++LG+G FG V Y + +G +AVK+L S ++F+ E+ ++ L +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 407 LLGFCL-EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
G G + + LV E++P+ L FL + +LD SR I +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL--G 131
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAP 519
SR R +HRDL A NIL+++E + KI+DFG+AK+ +D+ +V G + AP
Sbjct: 132 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAP 186
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E FS +SDV+SFGV++ E+ T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 177
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 237
Query: 561 LLS 563
L+S
Sbjct: 238 LIS 240
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 176
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
Query: 561 LLS 563
L+S
Sbjct: 237 LIS 239
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 561 LLS 563
L+S
Sbjct: 241 LIS 243
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 174
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 234
Query: 561 LLS 563
L+S
Sbjct: 235 LIS 237
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 192
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 252
Query: 561 LLS 563
L+S
Sbjct: 253 LIS 255
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPP 178
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 561 LLS 563
L+S
Sbjct: 239 LIS 241
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 14/211 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK-NEVVLVAKLQH 401
+++ F KLG G + VYKG+ +G +A+K + S +G E+ L+ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYF----LYEPEKQQQLDWSRRYKIIGGIARG 457
N+VRL + LV+EF+ N Y + + +L+ + ++ + +G
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ--WQLLQG 120
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYM 517
+ + HE+ +I+HRDLK N+L++ K+ DFG+A+ FG+ ++ V T Y
Sbjct: 121 LAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE--VVTLWYR 175
Query: 518 APEYAMHGQ-FSVKSDVYSFGVLVLEIITGK 547
AP+ M + +S D++S G ++ E+ITGK
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 561 LLS 563
L+S
Sbjct: 239 LIS 241
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 148
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMALE 206
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 178
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 561 LLS 563
L+S
Sbjct: 239 LIS 241
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 352 NKLGEGGFGEVY---KGVLPSGQEIAVKRL---SRSSGQGGQEFKNEVVLVAKLQHRNLV 405
+KLG GG VY +L ++A+K + R + + F+ EV ++L H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTIL--NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
++ E + LV E++ +L ++ E L I GI + H+
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD-- 129
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+RI+HRD+K NIL+D+ KI DFG+AK + + TN ++GT Y +PE A
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 526 QFSVKSDVYSFGVLVLEIITGK 547
+D+YS G+++ E++ G+
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGE 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 179
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 239
Query: 561 LLS 563
L+S
Sbjct: 240 LIS 242
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
D++ IEV + +G G FG V K +++A+K++ S + + F E+
Sbjct: 6 IDYKEIEV-------EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQ 55
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
++++ H N+V+L G CL LV E+ SL L+ E + +
Sbjct: 56 LSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTY 514
+G+ YLH +IHRDLK N+LL A KI DFG A QT N+ G+
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSA 168
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAA 559
+MAPE +S K DV+S+G+++ E+IT +K F + G A
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK--PFDEIGGPA 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P + E +K + D R I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV---YKELQKLSKFDEQRTATYITELANALS 127
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 561 LLS 563
L+S
Sbjct: 241 LIS 243
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 178
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 561 LLS 563
L+S
Sbjct: 239 LIS 241
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVL 395
D++ IEV + +G G FG V K +++A+K++ S + + F E+
Sbjct: 5 IDYKEIEV-------EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQ 54
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
++++ H N+V+L G CL LV E+ SL L+ E + +
Sbjct: 55 LSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTY 514
+G+ YLH +IHRDLK N+LL A KI DFG A QT N+ G+
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSA 167
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAA 559
+MAPE +S K DV+S+G+++ E+IT +K F + G A
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK--PFDEIGGPA 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 172
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 232
Query: 561 LLS 563
L+S
Sbjct: 233 LIS 235
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P + E +K + D R I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV---YKELQKLSKFDEQRTATYITELANALS 127
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPP 180
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 561 LLS 563
L+S
Sbjct: 241 LIS 243
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKNE 392
L++D+E E LG+G +G VY G S Q IA+K + + Q E
Sbjct: 15 LEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 69
Query: 393 VVLVAKLQHRNLVRLLG-FCLEGEEKILVYEFVPNKSLDYFL---YEPEKQQQLDWSRRY 448
+ L L+H+N+V+ LG F G KI + E VP SL L + P K +
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNE------- 121
Query: 449 KIIG----GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAK-IFGVDQ 502
+ IG I G+ YLH++ +I+HRD+K N+L++ KISDFG +K + G++
Sbjct: 122 QTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178
Query: 503 TQGNTNRIVGTYGYMAPEYAMHGQ--FSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
T GT YMAPE G + +D++S G ++E+ TGK FY+
Sbjct: 179 C---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK--PPFYE 227
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLV 405
F+ K+G+G FGEV+KG+ Q++ A+K + + ++ + E+ ++++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 406 RLLGFCLEGEEKILVYEFVPNKS-LDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ G L+ + ++ E++ S LD L EP LD ++ I+ I +G+ YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIATILREILKGLDYLHSE 143
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
+ IHRD+KA+N+LL K++DFG+A + TQ N VGT +MAPE
Sbjct: 144 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 525 GQFSVKSDVYSFGVLVLEIITGKKNSS 551
+ K+D++S G+ +E+ G+ S
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHS 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 14/217 (6%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
+E+ + +LG G FG V G ++AVK + S EF E + KL
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLS 61
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H LV+ G C + +V E++ N L +L K L+ S+ ++ + G+ +
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAF 119
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYM 517
L + IHRDL A N L+D ++ K+SDFGM + DQ + VGT +
Sbjct: 120 LESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWS 172
Query: 518 APEYAMHGQFSVKSDVYSFGVLVLEIIT-GKKNSSFY 553
APE + ++S KSDV++FG+L+ E+ + GK Y
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 150
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ +D+ + + G +MA E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-LDKEFDSVHNKTGAKLPVKWMALE 208
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI++FG + V + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 177
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 237
Query: 561 LLS 563
L+S
Sbjct: 238 LIS 240
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLV 405
F+ K+G+G FGEV+KG+ Q++ A+K + + ++ + E+ ++++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 406 RLLGFCLEGEEKILVYEFVPNKS-LDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ G L+ + ++ E++ S LD L EP LD ++ I+ I +G+ YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIATILREILKGLDYLHSE 138
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
+ IHRD+KA+N+LL K++DFG+A + TQ N VGT +MAPE
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 525 GQFSVKSDVYSFGVLVLEIITGKKNSS 551
+ K+D++S G+ +E+ G+ S
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHS 220
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 353 KLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V +G+++AVK++ Q + NEVV++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 412 LEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
L G+E +V EF+ +L D + ++Q+ + + R + YLH +I
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQG---VI 163
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
HRD+K+ +ILL ++ K+SDFG V + +VGT +MAPE + +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCA--QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 531 SDVYSFGVLVLEIITGK 547
D++S G++V+E+I G+
Sbjct: 222 VDIWSLGIMVIEMIDGE 238
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 168
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 226
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 149
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 207
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 141
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 199
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLV 405
F+ K+G+G FGEV+KG+ Q++ A+K + + ++ + E+ ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 406 RLLGFCLEGEEKILVYEFVPNKS-LDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ G L+ + ++ E++ S LD L EP LD ++ I+ I +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIATILREILKGLDYLHSE 123
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
+ IHRD+KA+N+LL K++DFG+A + TQ N VGT +MAPE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 525 GQFSVKSDVYSFGVLVLEIITGKKNSS 551
+ K+D++S G+ +E+ G+ S
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 167
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 225
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKL 399
A + ++GEG +G+V+K + G+ +A+KR+ +G+ G EV ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 400 Q---HRNLVRLLGFCL----EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
+ H N+VRL C + E K+ LV+E V Y PE + + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--DMM 126
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
+ RG+ +LH R++HRDLK NIL+ + K++DFG+A+I+ Q +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
T Y APE + ++ D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLS-RSSGQGGQEFKNEVVLVAKLQHRNLV 405
F+ K+G+G FGEV+KG+ Q++ A+K + + ++ + E+ ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 406 RLLGFCLEGEEKILVYEFVPNKS-LDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ G L+ + ++ E++ S LD L EP LD ++ I+ I +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIATILREILKGLDYLHSE 123
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
+ IHRD+KA+N+LL K++DFG+A + TQ N VGT +MAPE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 525 GQFSVKSDVYSFGVLVLEIITGKKNSS 551
+ K+D++S G+ +E+ G+ S
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHS 205
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 148
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 206
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 149
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 207
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 144
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 202
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 334 LQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKNE 392
L++D+E E LG+G +G VY G S Q IA+K + + Q E
Sbjct: 1 LEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 55
Query: 393 VVLVAKLQHRNLVRLLG-FCLEGEEKILVYEFVPNKSLDYFL---YEPEKQQQLDWSRRY 448
+ L L+H+N+V+ LG F G KI + E VP SL L + P K +
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNE------- 107
Query: 449 KIIG----GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAK-IFGVDQ 502
+ IG I G+ YLH++ +I+HRD+K N+L++ KISDFG +K + G++
Sbjct: 108 QTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 164
Query: 503 TQGNTNRIVGTYGYMAPEYAMHGQ--FSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
T GT YMAPE G + +D++S G ++E+ TGK FY+
Sbjct: 165 C---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK--PPFYE 213
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 146
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 204
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKL 399
A + ++GEG +G+V+K + G+ +A+KR+ +G+ G EV ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 400 Q---HRNLVRLLGFCL----EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
+ H N+VRL C + E K+ LV+E V Y PE + + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--DMM 126
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
+ RG+ +LH R++HRDLK NIL+ + K++DFG+A+I+ Q +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
T Y APE + ++ D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYL-- 147
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMALE 205
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKL 399
A + ++GEG +G+V+K + G+ +A+KR+ +G+ G EV ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 400 Q---HRNLVRLLGFCL----EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
+ H N+VRL C + E K+ LV+E V Y PE + + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--DMM 126
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
+ RG+ +LH R++HRDLK NIL+ + K++DFG+A+I+ Q +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
T Y APE + ++ D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + + I A+K L ++ + + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H ++IHRD+K N+LL + KI+DFG + V + GT Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARD 235
Query: 561 LLS 563
L+S
Sbjct: 236 LIS 238
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
++G G FGEV+ G L + + + R + +F E ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
C + + +V E V + D+ + + +L +++G A G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAK--IFGVDQTQGNTNRIVGTYGYMAPEYAMHGQF 527
IHRDL A N L+ + KISDFGM++ GV G ++ + APE +G++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV--PVKWTAPEALNYGRY 292
Query: 528 SVKSDVYSFGVLVLEIIT 545
S +SDV+SFG+L+ E +
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI++FG + V + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 561 LLS 563
L+S
Sbjct: 239 LIS 241
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 147
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALE 205
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 154
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALE 212
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 208
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALE 266
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 106/243 (43%), Gaps = 33/243 (13%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKL 399
A +F LG+G FG VY + I A+K L ++ + + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
+H N++RL G+ + L+ E+ P L E +K + D R I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
Y H R+IHRD+K N+LL + KI+DFG + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPP 176
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITGKK--NSSFYQ-----------------TDGAAD 560
E K D++S GVL E + GK ++ YQ T+GA D
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
Query: 561 LLS 563
L+S
Sbjct: 237 LIS 239
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 150
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALE 208
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 149
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALE 207
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 354 LGEGGFGEVYKGVL--PSGQEI--AVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLL 408
+G G FG VY G L G++I AVK L+R + G +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 409 GFCLEGE-EKILVYEFVPNKSLDYFL----YEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
G CL E ++V ++ + L F+ + P + + + + +A+G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 149
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT---YGYMAPE 520
+ + +HRDL A N +LD + K++DFG+A+ D+ + + G +MA E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMALE 207
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F+ KSDV+SFGVL+ E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKL 399
+AT+ + ++G G +G VYK P SG +A+K + +G+ G EV L+ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 400 Q---HRNLVRLLGFCL----EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
+ H N+VRL+ C + E K+ LV+E V Y P + + ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLM 118
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q + +V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVV 172
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
T Y APE + ++ D++S G + E+ K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V V SG+ +AVK++ Q + NEVV++ QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 412 LEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
L G+E +V EF+ +L D + ++Q+ + + + + LH +I
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VI 138
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
HRD+K+ +ILL + K+SDFG V + +VGT +MAPE + +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 531 SDVYSFGVLVLEIITGK 547
D++S G++V+E++ G+
Sbjct: 197 VDIWSLGIMVIEMVDGE 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
K K KY + E N T ++ Q + E E NN LG G FG+V +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
G+E +AVK L ++ +E +E+ +++ L QH N+V LLG C G +
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEFVPNKSLDYFL-----------YEPEK--QQQLDWSRRYKIIGGIARGILYLHEDS 465
++ E+ L FL Y P ++QL +A+G+ +L +
Sbjct: 127 VITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN 186
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYA 522
IHRD+ A N+LL KI DFG+A+ D +GN V +MAPE
Sbjct: 187 ---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK---WMAPESI 240
Query: 523 MHGQFSVKSDVYSFGVLVLEIIT 545
++V+SDV+S+G+L+ EI +
Sbjct: 241 FDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ + +MAPE G F+ SD++SFGV++ EI +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 23/203 (11%)
Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQ 400
N+ LGEG FG+V +GQ++A+K L++S QG + E+ + L+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 71
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H ++++L +E I+V E+ N+ DY + + +Q +RR+ I + Y
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEY 127
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAP 519
H R +I+HRDLK N+LLD +N KI+DFG++ I T GN + G+ Y AP
Sbjct: 128 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 180
Query: 520 EYAMHGQFSV--KSDVYSFGVLV 540
E + G+ + DV+S GV++
Sbjct: 181 E-VISGKLYAGPEVDVWSCGVIL 202
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSS--GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
++G G FGEV+ G L + + + R + +F E ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
C + + +V E V + D+ + + +L +++G A G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAK--IFGVDQTQGNTNRIVGTYGYMAPEYAMHGQF 527
IHRDL A N L+ + KISDFGM++ GV G ++ + APE +G++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV--PVKWTAPEALNYGRY 292
Query: 528 SVKSDVYSFGVLVLEIIT 545
S +SDV+SFG+L+ E +
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 130 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 186
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ + +MAPE G F+ SD++SFGV++ EI +
Sbjct: 187 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V V SG+ +AVK++ Q + NEVV++ QH N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 412 LEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
L G+E +V EF+ +L D + ++Q+ + + + + LH +I
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VI 147
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
HRD+K+ +ILL + K+SDFG V + +VGT +MAPE + +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 531 SDVYSFGVLVLEIITGK 547
D++S G++V+E++ G+
Sbjct: 206 VDIWSLGIMVIEMVDGE 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 23/203 (11%)
Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQ 400
N+ LGEG FG+V +GQ++A+K L++S QG + E+ + L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 62
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H ++++L +E I+V E+ N+ DY + + +Q +RR+ I + Y
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEY 118
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAP 519
H R +I+HRDLK N+LLD +N KI+DFG++ I T GN + G+ Y AP
Sbjct: 119 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 171
Query: 520 EYAMHGQFSV--KSDVYSFGVLV 540
E + G+ + DV+S GV++
Sbjct: 172 E-VISGKLYAGPEVDVWSCGVIL 193
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V V SG+ +AVK++ Q + NEVV++ QH N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 412 LEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
L G+E +V EF+ +L D + ++Q+ + + + + LH +I
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VI 142
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
HRD+K+ +ILL + K+SDFG V + +VGT +MAPE + +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 531 SDVYSFGVLVLEIITGK 547
D++S G++V+E++ G+
Sbjct: 201 VDIWSLGIMVIEMVDGE 217
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 23/203 (11%)
Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQ 400
N+ LGEG FG+V +GQ++A+K L++S QG + E+ + L+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H ++++L +E I+V E+ N+ DY + + +Q +RR+ I + Y
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEY 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAP 519
H R +I+HRDLK N+LLD +N KI+DFG++ I T GN + G+ Y AP
Sbjct: 129 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 181
Query: 520 EYAMHGQFSV--KSDVYSFGVLV 540
E + G+ + DV+S GV++
Sbjct: 182 E-VISGKLYAGPEVDVWSCGVIL 203
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V V SG+ +AVK++ Q + NEVV++ QH N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 412 LEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
L G+E +V EF+ +L D + ++Q+ + + + + LH +I
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VI 149
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
HRD+K+ +ILL + K+SDFG V + +VGT +MAPE + +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 531 SDVYSFGVLVLEIITGK 547
D++S G++V+E++ G+
Sbjct: 208 VDIWSLGIMVIEMVDGE 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 190 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ + +MAPE G F+ SD++SFGV++ EI +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 19/212 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSR---SSGQGGQEFKNEVVLVA 397
+ ++ + LG+G FGEV K + +GQE AVK +S+ + EV L+
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARG 457
+L H N+++L F + LV E L + ++ ++D +R II + G
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSG 144
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
I Y+H++ +I+HRDLK N+LL++ + N +I DFG++ F + + +GT
Sbjct: 145 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTA 198
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
Y+APE +HG + K DV+S GV++ +++G
Sbjct: 199 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 23/203 (11%)
Query: 347 NFSTDNKLGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQ 400
N+ LGEG FG+V +GQ++A+K L++S QG + E+ + L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 66
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H ++++L +E I+V E+ N+ DY + + +Q +RR+ I + Y
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF--FQQIISAVEY 122
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAP 519
H R +I+HRDLK N+LLD +N KI+DFG++ I T GN + G+ Y AP
Sbjct: 123 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 175
Query: 520 EYAMHGQFSV--KSDVYSFGVLV 540
E + G+ + DV+S GV++
Sbjct: 176 E-VISGKLYAGPEVDVWSCGVIL 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 19/201 (9%)
Query: 354 LGEGGFGEVY--KGVLPSGQEIAVKRLSR---SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
LG+G FGEV K + +GQE AVK +S+ + EV L+ +L H N+++L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
F + LV E L + ++ ++D +R II + GI Y+H++ +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---K 146
Query: 469 IIHRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
I+HRDLK N+LL++ + N +I DFG++ F + + +GT Y+APE +HG
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHG 202
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
+ K DV+S GV++ +++G
Sbjct: 203 TYDEKCDVWSTGVILYILLSG 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
K K KY + E N T ++ Q + E E NN LG G FG+V +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
G+E +AVK L ++ +E +E+ +++ L QH N+V LLG C G +
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEFVPNKSLDYFL-------YEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
++ E+ L FL + E + L+ +A+G+ +L + IH
Sbjct: 127 VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIH 183
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHGQFS 528
RD+ A N+LL KI DFG+A+ D +GN V +MAPE ++
Sbjct: 184 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK---WMAPESIFDCVYT 240
Query: 529 VKSDVYSFGVLVLEIIT 545
V+SDV+S+G+L+ EI +
Sbjct: 241 VQSDVWSYGILLWEIFS 257
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM + I+ D +
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 189 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
K K KY + E N T ++ Q + E E NN LG G FG+V +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
G+E +AVK L ++ +E +E+ +++ L QH N+V LLG C G +
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL----------R 468
++ E+ L FL K + L+ + I A LH S++
Sbjct: 127 VITEYCCYGDLLNFLRR--KSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHG 525
IHRD+ A N+LL KI DFG+A+ D +GN V +MAPE
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK---WMAPESIFDC 241
Query: 526 QFSVKSDVYSFGVLVLEIIT 545
++V+SDV+S+G+L+ EI +
Sbjct: 242 VYTVQSDVWSYGILLWEIFS 261
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 25/239 (10%)
Query: 326 NDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG-VLPSGQE-----IAVKRL 378
N T ++ Q + E E NN LG G FG+V + G+E +AVK L
Sbjct: 17 NSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML 76
Query: 379 SRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--- 433
++ +E +E+ +++ L QH N+V LLG C G +++ E+ L FL
Sbjct: 77 KSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 136
Query: 434 ----YEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
+ E + L+ +A+G+ +L + IHRD+ A N+LL KI
Sbjct: 137 AEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKI 193
Query: 490 SDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +GN V +MAPE ++V+SDV+S+G+L+ EI +
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 14/217 (6%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPS--GQEI--AVKRLSRSSGQGGQE-FKNEVVLVA 397
+A + + LGEG FGEVY+GV + G++I AVK + +E F +E V++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARG 457
L H ++V+L+G +E E ++ E P L ++L + ++ Y + I +
Sbjct: 65 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKA 121
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGNTNRIVGTYGY 516
+ YL + +HRD+ NIL+ + K+ DFG+++ I D + + R+ +
Sbjct: 122 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKW 176
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 553
M+PE +F+ SDV+ F V + EI++ K F+
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 14/217 (6%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPS--GQEI--AVKRLSRSSGQGGQE-FKNEVVLVA 397
+A + + LGEG FGEVY+GV + G++I AVK + +E F +E V++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARG 457
L H ++V+L+G +E E ++ E P L ++L + ++ Y + I +
Sbjct: 81 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKA 137
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGNTNRIVGTYGY 516
+ YL + +HRD+ NIL+ + K+ DFG+++ I D + + R+ +
Sbjct: 138 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKW 192
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 553
M+PE +F+ SDV+ F V + EI++ K F+
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKLQH 401
+F LG+G FG VY + I A+K L ++ + + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++RL G+ + L+ E+ P L E +K + D R I +A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H R+IHRD+K N+LL + KI+DFG + V + + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITG 546
K D++S GVL E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V V SG+ +AVK++ Q + NEVV++ QH N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 412 LEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
L G+E +V EF+ +L D + ++Q+ + + + + LH +I
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VI 269
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
HRD+K+ +ILL + K+SDFG V + +VGT +MAPE + +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 531 SDVYSFGVLVLEIITGK 547
D++S G++V+E++ G+
Sbjct: 328 VDIWSLGIMVIEMVDGE 344
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 14/217 (6%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPS--GQEI--AVKRLSRSSGQGGQE-FKNEVVLVA 397
+A + + LGEG FGEVY+GV + G++I AVK + +E F +E V++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 398 KLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARG 457
L H ++V+L+G +E E ++ E P L ++L + ++ Y + I +
Sbjct: 69 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKA 125
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGNTNRIVGTYGY 516
+ YL + +HRD+ NIL+ + K+ DFG+++ I D + + R+ +
Sbjct: 126 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKW 180
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFY 553
M+PE +F+ SDV+ F V + EI++ K F+
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 19/216 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKL 399
+AT+ + ++G G +G VYK P SG +A+K + +G+ G EV L+ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 400 Q---HRNLVRLLGFCL----EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
+ H N+VRL+ C + E K+ LV+E V Y P + + ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLM 118
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q +V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVV 172
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
T Y APE + ++ D++S G + E+ K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ D+ L + Y + + +G+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 118
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 19/201 (9%)
Query: 354 LGEGGFGEVY--KGVLPSGQEIAVKRLSR---SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
LG+G FGEV K + +GQE AVK +S+ + EV L+ +L H N+++L
Sbjct: 57 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
F + LV E L + ++ ++D +R II + GI Y+H++ +
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---K 169
Query: 469 IIHRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
I+HRDLK N+LL++ + N +I DFG++ F + + +GT Y+APE +HG
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHG 225
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
+ K DV+S GV++ +++G
Sbjct: 226 TYDEKCDVWSTGVILYILLSG 246
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLV 405
+ +LG GGFG V + + +G+++A+K+ + S + + + E+ ++ KL H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 406 RL------LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
L + +L E+ L +L + E L ++ I+ +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 460 YLHEDSRLRIIHRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
YLHE+ RIIHRDLK NI+L + KI D G AK +DQ + T VGT Y
Sbjct: 137 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE-FVGTLQY 190
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+APE +++V D +SFG L E ITG
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SGQGGQEFKNEVVLVAKLQHRNLV 405
+ +LG GGFG V + + +G+++A+K+ + S + + + E+ ++ KL H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 406 RL------LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
L + +L E+ L +L + E L ++ I+ +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 460 YLHEDSRLRIIHRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
YLHE+ RIIHRDLK NI+L + KI D G AK +DQ + T VGT Y
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTE-FVGTLQY 189
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+APE +++V D +SFG L E ITG
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 16/199 (8%)
Query: 354 LGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQE--FKNEVVLVAKLQHRNLVRLLGF 410
LG+G FGEV K + QE AVK ++++S + EV L+ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 411 CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
+ +V E L + + ++ + D +R II + GI Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 471 HRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQF 527
HRDLK NILL++ + + KI DFG++ F Q +GT Y+APE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 528 SVKSDVYSFGVLVLEIITG 546
K DV+S GV++ +++G
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+ E+ + + +LG G FG V G ++A+K + S EF E ++ L
Sbjct: 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL 76
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H LV+L G C + ++ E++ N L +L E + Q + ++ + +
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAME 134
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YL + +HRDL A N L++ + K+SDFG+++ + +D + ++ + P
Sbjct: 135 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPP 190
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEI 543
E M+ +FS KSD+++FGVL+ EI
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 16/199 (8%)
Query: 354 LGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQE--FKNEVVLVAKLQHRNLVRLLGF 410
LG+G FGEV K + QE AVK ++++S + EV L+ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 411 CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
+ +V E L + + ++ + D +R II + GI Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 471 HRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQF 527
HRDLK NILL++ + + KI DFG++ F Q +GT Y+APE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 528 SVKSDVYSFGVLVLEIITG 546
K DV+S GV++ +++G
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 19/201 (9%)
Query: 354 LGEGGFGEVY--KGVLPSGQEIAVKRLSR---SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
LG+G FGEV K + +GQE AVK +S+ + EV L+ +L H N+++L
Sbjct: 58 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
F + LV E L + ++ ++D +R II + GI Y+H++ +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---K 170
Query: 469 IIHRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
I+HRDLK N+LL++ + N +I DFG++ F + + +GT Y+APE +HG
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHG 226
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
+ K DV+S GV++ +++G
Sbjct: 227 TYDEKCDVWSTGVILYILLSG 247
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 353 KLGEGGFGEV-YKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
K+GEG G V V SG+ +AVK++ Q + NEVV++ QH N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 412 LEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
L G+E +V EF+ +L D + ++Q+ + + + + LH +I
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VI 192
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
HRD+K+ +ILL + K+SDFG V + +VGT +MAPE + +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 531 SDVYSFGVLVLEIITGK 547
D++S G++V+E++ G+
Sbjct: 251 VDIWSLGIMVIEMVDGE 267
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKL 399
V NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+ H R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y AP
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 176
Query: 520 EYAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
E + + +S D++S G + E++T + + + D D L
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKLQH 401
+F LG+G FG VY + I A+K L ++ + + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++RL G+ + L+ E+ P L E +K + D R I +A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
H R+IHRD+K N+LL + KI+DFG + V + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITG 546
K D++S GVL E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 354 LGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQE--FKNEVVLVAKLQHRNLVRLLGF 410
LG+G FGEV K + QE AVK ++++S + EV L+ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 411 CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
+ +V E L E K+++ +II + GI Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IV 143
Query: 471 HRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQF 527
HRDLK NILL++ + + KI DFG++ F Q +GT Y+APE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 528 SVKSDVYSFGVLVLEIITG 546
K DV+S GV++ +++G
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+ E+ + + +LG G FG V G ++A+K + S EF E ++ L
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL 61
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H LV+L G C + ++ E++ N L +L E + Q + ++ + +
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAME 119
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YL + +HRDL A N L++ + K+SDFG+++ + +D ++ + P
Sbjct: 120 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEI 543
E M+ +FS KSD+++FGVL+ EI
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPE 174
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 214
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 19/216 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKN--EVVLVAKL 399
+AT+ + ++G G +G VYK P SG +A+K + +G+ G EV L+ +L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 400 Q---HRNLVRLLGFCL----EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
+ H N+VRL+ C + E K+ LV+E V Y P + + ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLM 118
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q +V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVV 172
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
T Y APE + ++ D++S G + E+ K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 31/200 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G FG+V G G ++AVK + + Q F E ++ +L+H NLV+LLG +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 414 GEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG---------IARGILYLHE 463
+ + +V E++ SL +L SR ++GG + + YL
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
++ +HRDL A N+L+ + K+SDFG+ K Q G + APE
Sbjct: 308 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALR 359
Query: 524 HGQFSVKSDVYSFGVLVLEI 543
+FS KSDV+SFG+L+ EI
Sbjct: 360 EKKFSTKSDVWSFGILLWEI 379
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ D+ L + Y + + +G+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ D+ L + Y + + +G+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 120
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 175
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ IA G+ YL+ + +HR+L A N ++ + KI DFGM + I+ D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 190 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 182
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNE 392
T + + KLG+G FG V +G PSG+ +AVK L S + +F E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG 452
V + L HRNL+RL G L K +V E P SL L + + L RY +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGV--DQTQGNTNRI 510
+A G+ YL R IHRDL A N+LL KI DFG+ + D +R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
V + + APE FS SD + FGV + E+ T
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGN 506
++ IA G+ YL+ + +HR+L A N ++ + KI DFGM + I+ D +
Sbjct: 134 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 507 TNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
++ +MAPE G F+ SD++SFGV++ EI +
Sbjct: 191 GKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 21/230 (9%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVK--RLSRSSGQG 385
E LQ E + + N LGEG FG V +G L + ++AVK +L SS +
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK-----ILVYEFVPNKSLD-YFLYE--PE 437
+EF +E + H N++RLLG C+E + +++ F+ L Y LY
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139
Query: 438 KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA-K 496
+ + K + IA G+ YL S +HRDL A N +L +M ++DFG++ K
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 497 IFGVD-QTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
I+ D QG ++ ++A E ++ KSDV++FGV + EI T
Sbjct: 197 IYSGDYYRQGRIAKM--PVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+ E+ + + +LG G FG V G ++A+K + S EF E ++ L
Sbjct: 2 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL 60
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H LV+L G C + ++ E++ N L +L E + Q + ++ + +
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAME 118
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YL + +HRDL A N L++ + K+SDFG+++ D+ + + P
Sbjct: 119 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPP 174
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEI 543
E M+ +FS KSD+++FGVL+ EI
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+ E+ + + +LG G FG V G ++A+K + S EF E ++ L
Sbjct: 3 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL 61
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H LV+L G C + ++ E++ N L +L E + Q + ++ + +
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAME 119
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YL + +HRDL A N L++ + K+SDFG+++ D+ + + P
Sbjct: 120 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPP 175
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEI 543
E M+ +FS KSD+++FGVL+ EI
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 182
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 220
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 36/263 (13%)
Query: 311 KAKNKYNA---VPEVNADNDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG- 365
K K KY + E N T ++ Q + E E NN LG G FG+V +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT 66
Query: 366 VLPSGQE-----IAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKI 418
G+E +AVK L ++ +E +E+ +++ L QH N+V LLG C G +
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 419 LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG-------------IARGILYLHEDS 465
++ E+ L FL K + L+ + I +A+G+ +L +
Sbjct: 127 VITEYCCYGDLLNFLRR--KSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYA 522
IHRD+ A N+LL KI DFG+A+ D +GN V +MAPE
Sbjct: 185 ---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK---WMAPESI 238
Query: 523 MHGQFSVKSDVYSFGVLVLEIIT 545
++V+SDV+S+G+L+ EI +
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 27/223 (12%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK 390
E ++ D + EV + +LG+G FG+VYK +G A K + S + +++
Sbjct: 1 EHVRRDLDPNEV----WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI 56
Query: 391 NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKI 450
E+ ++A H +V+LLG + ++ EF P ++D + E LD
Sbjct: 57 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQ 110
Query: 451 IGGIARGIL----YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM-AKIFGVDQTQG 505
I + R +L +LH RIIHRDLKA N+L+ E + +++DFG+ AK +T
Sbjct: 111 IQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL---KTLQ 164
Query: 506 NTNRIVGTYGYMAPEYAM-----HGQFSVKSDVYSFGVLVLEI 543
+ +GT +MAPE M + K+D++S G+ ++E+
Sbjct: 165 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKG----VLPSGQE--IAVKRLSRSSGQGGQ-EFKNEVV 394
EV+ + +LG+G FG VY+G ++ E +AVK ++ S+ + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSR-------R 447
++ ++VRLLG +G+ ++V E + + L +L + + + R
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
++ IA G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG 189
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+ + +MAPE G F+ SD++SFGV++ EI +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNE 392
T + + KLG+G FG V +G PSG+ +AVK L S + +F E
Sbjct: 12 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG 452
V + L HRNL+RL G L K +V E P SL L + + L RY +
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 128
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGV--DQTQGNTNRI 510
+A G+ YL R IHRDL A N+LL KI DFG+ + D +R
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
V + + APE FS SD + FGV + E+ T
Sbjct: 186 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 31/200 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G FG+V G G ++AVK + + Q F E ++ +L+H NLV+LLG +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 414 GEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG---------IARGILYLHE 463
+ + +V E++ SL +L SR ++GG + + YL
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
++ +HRDL A N+L+ + K+SDFG+ K Q G + APE
Sbjct: 121 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALR 172
Query: 524 HGQFSVKSDVYSFGVLVLEI 543
+FS KSDV+SFG+L+ EI
Sbjct: 173 EKKFSTKSDVWSFGILLWEI 192
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+ E+ + + +LG G FG V G ++A+K + S EF E ++ L
Sbjct: 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL 76
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H LV+L G C + ++ E++ N L +L E + Q + ++ + +
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAME 134
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YL + +HRDL A N L++ + K+SDFG+++ D+ + + P
Sbjct: 135 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPP 190
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEI 543
E M+ +FS KSD+++FGVL+ EI
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 352 NKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNEVVLVAKLQHRNL 404
KLG+G FG V +G PSG+ +AVK L S + +F EV + L HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+RL G L K +V E P SL L + + L RY + +A G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYMAPEYA 522
R IHRDL A N+LL KI DFG+ + D +R V + + APE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 190
Query: 523 MHGQFSVKSDVYSFGVLVLEIIT 545
FS SD + FGV + E+ T
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 31/200 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G FG+V G G ++AVK + + Q F E ++ +L+H NLV+LLG +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 414 GEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG---------IARGILYLHE 463
+ + +V E++ SL +L SR ++GG + + YL
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
++ +HRDL A N+L+ + K+SDFG+ K Q G + APE
Sbjct: 136 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALR 187
Query: 524 HGQFSVKSDVYSFGVLVLEI 543
+FS KSDV+SFG+L+ EI
Sbjct: 188 EKKFSTKSDVWSFGILLWEI 207
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 19/201 (9%)
Query: 354 LGEGGFGEVY--KGVLPSGQEIAVKRLSR---SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
LG+G FGEV K + +GQE AVK +S+ + EV L+ +L H N+ +L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
F + LV E L + ++ ++D +R II + GI Y H++ +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYXHKN---K 146
Query: 469 IIHRDLKASNILLDA---EMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
I+HRDLK N+LL++ + N +I DFG++ F + + +GT Y+APE +HG
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGTAYYIAPE-VLHG 202
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
+ K DV+S GV++ +++G
Sbjct: 203 TYDEKCDVWSTGVILYILLSG 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 27/223 (12%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK 390
E ++ D + EV + +LG+G FG+VYK +G A K + S + +++
Sbjct: 9 EHVRRDLDPNEV----WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI 64
Query: 391 NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKI 450
E+ ++A H +V+LLG + ++ EF P ++D + E LD
Sbjct: 65 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQ 118
Query: 451 IGGIARGIL----YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM-AKIFGVDQTQG 505
I + R +L +LH RIIHRDLKA N+L+ E + +++DFG+ AK +T
Sbjct: 119 IQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL---KTLQ 172
Query: 506 NTNRIVGTYGYMAPEYAM-----HGQFSVKSDVYSFGVLVLEI 543
+ +GT +MAPE M + K+D++S G+ ++E+
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+ E+ + + +LG G FG V G ++A+K + S EF E ++ L
Sbjct: 9 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL 67
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H LV+L G C + ++ E++ N L +L E + Q + ++ + +
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAME 125
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YL + +HRDL A N L++ + K+SDFG+++ D+ + + P
Sbjct: 126 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPP 181
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEI 543
E M+ +FS KSD+++FGVL+ EI
Sbjct: 182 EVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 31/200 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G FG+V G G ++AVK + + Q F E ++ +L+H NLV+LLG +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 414 GEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG---------IARGILYLHE 463
+ + +V E++ SL +L SR ++GG + + YL
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM 523
++ +HRDL A N+L+ + K+SDFG+ K Q G + APE
Sbjct: 127 NN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALR 178
Query: 524 HGQFSVKSDVYSFGVLVLEI 543
FS KSDV+SFG+L+ EI
Sbjct: 179 EAAFSTKSDVWSFGILLWEI 198
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNE 392
T + + KLG+G FG V +G PSG+ +AVK L S + +F E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG 452
V + L HRNL+RL G L K +V E P SL L + + L RY +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGV--DQTQGNTNRI 510
+A G+ YL R IHRDL A N+LL KI DFG+ + D +R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
V + + APE FS SD + FGV + E+ T
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNE 392
T + + KLG+G FG V +G PSG+ +AVK L S + +F E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG 452
V + L HRNL+RL G L K +V E P SL L + + L RY +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGV--DQTQGNTNRI 510
+A G+ YL R IHRDL A N+LL KI DFG+ + D +R
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
V + + APE FS SD + FGV + E+ T
Sbjct: 176 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNE 392
T + + KLG+G FG V +G PSG+ +AVK L S + +F E
Sbjct: 6 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG 452
V + L HRNL+RL G L K +V E P SL L + + L RY +
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 122
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGV--DQTQGNTNRI 510
+A G+ YL R IHRDL A N+LL KI DFG+ + D +R
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
V + + APE FS SD + FGV + E+ T
Sbjct: 180 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYKGVL--PSGQ--EIAVKRLSR---SSGQGGQEFKNE 392
T + + KLG+G FG V +G PSG+ +AVK L S + +F E
Sbjct: 12 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG 452
V + L HRNL+RL G L K +V E P SL L + + L RY +
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 128
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGV--DQTQGNTNRI 510
+A G+ YL R IHRDL A N+LL KI DFG+ + D +R
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
V + + APE FS SD + FGV + E+ T
Sbjct: 186 V-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+E V ++ L F+ + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLGF 410
K+GEG +G VYK G+ A+K++ G E+ ++ +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 411 CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
+ +LV+E + ++ L L E + ++ + + + GI Y H+ R++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLL--QLLNGIAYCHDR---RVL 122
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM-HGQFSV 529
HRDLK N+L++ E KI+DFG+A+ FG+ + T+ IV T Y AP+ M ++S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 530 KSDVYSFGVLVLEIITG 546
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%), Gaps = 19/207 (9%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+A+K + ++ + Q+ EV ++ L H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + L+ E+ + DY + +++ S+ +I+ + Y
Sbjct: 75 NIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----Y 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H+ RI+HRDLKA N+LLDA+MN KI+DFG + F V G + G Y APE
Sbjct: 130 CHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDAFCGAPPYAAPE 183
Query: 521 YAMHGQFS-VKSDVYSFGVLVLEIITG 546
++ + DV+S GV++ +++G
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 357 GGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE- 415
G FG V+K L + + +AVK Q Q + EV + ++H N+++ +G G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 416 ---EKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED-------S 465
+ L+ F SL FL K + W+ I +ARG+ YLHED
Sbjct: 93 VDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
+ I HRD+K+ N+LL + I+DFG+A F ++ G+T+ VGT YMAPE + G
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEG 207
Query: 526 QFS------VKSDVYSFGVLVLEIIT 545
+ ++ D+Y+ G+++ E+ +
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 19/207 (9%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+A+K + ++ + Q+ EV ++ L H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + L+ E+ + DY + +++ S+ +I+ + Y
Sbjct: 72 NIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----Y 126
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H+ RI+HRDLKA N+LLDA+MN KI+DFG + F V G + G+ Y APE
Sbjct: 127 CHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDTFCGSPPYAAPE 180
Query: 521 YAMHGQFS-VKSDVYSFGVLVLEIITG 546
++ + DV+S GV++ +++G
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKL-Q 400
N+ + +GEG FG+V K + + A+KR+ +S ++F E+ ++ KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII--------- 451
H N++ LLG C L E+ P+ +L FL K + L+ + I
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSS 131
Query: 452 -------GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ 504
+ARG+ YL S+ + IHRDL A NIL+ KI+DFG+++
Sbjct: 132 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-------- 180
Query: 505 GNTNRIVGTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
G + T G +MA E + ++ SDV+S+GVL+ EI++
Sbjct: 181 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 25/233 (10%)
Query: 350 TDNKLGEGGFGEVYKG-VLPSGQ---EIAVKRLSR-SSGQGGQEFKNEVVLVAKLQHRNL 404
+D +G+G FG VY G + Q + A+K LSR + Q + F E +L+ L H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 405 VRLLGFCL--EGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
+ L+G L EG +L+ ++ + L F+ P++ + + + +ARG+ YL
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYLA 141
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK------IFGVDQTQGNTNRIVGTYGY 516
E + +HRDL A N +LD K++DFG+A+ + V Q + + T
Sbjct: 142 EQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT--- 195
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINR 569
A E +F+ KSDV+SFGVL+ E++T + + Y+ DL +++ R
Sbjct: 196 -ALESLQTYRFTTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDLTHFLAQGR 245
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
+LG G FG V G ++A+K + S EF E ++ L H LV+L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
+ ++ E++ N L +L E + Q + ++ + + YL + +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 472 RDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS 531
RDL A N L++ + K+SDFG+++ D+ + + PE M+ +FS KS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKS 182
Query: 532 DVYSFGVLVLEI 543
D+++FGVL+ EI
Sbjct: 183 DIWAFGVLMWEI 194
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 216
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 175
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 29/244 (11%)
Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRL 378
PE+N + SLQ I++ +F LG+G FG+V+ + Q A+K L
Sbjct: 2 PELNKER-----PSLQ-----IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL 51
Query: 379 SRSSGQGGQEFK----NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
+ + + + VL +H L + E V E++ L +Y
Sbjct: 52 KKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MY 108
Query: 435 EPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
+ + D SR I G+ +LH I++RDLK NILLD + + KI+DFGM
Sbjct: 109 HIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM 165
Query: 495 AK--IFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSF 552
K + G TN GT Y+APE + +++ D +SFGVL+ E++ G+ S F
Sbjct: 166 CKENMLG----DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPF 219
Query: 553 YQTD 556
+ D
Sbjct: 220 HGQD 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKL-Q 400
N+ + +GEG FG+V K + + A+KR+ +S ++F E+ ++ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII--------- 451
H N++ LLG C L E+ P+ +L FL K + L+ + I
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSS 141
Query: 452 -------GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ 504
+ARG+ YL S+ + IHRDL A NIL+ KI+DFG+++
Sbjct: 142 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-------- 190
Query: 505 GNTNRIVGTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
G + T G +MA E + ++ SDV+S+GVL+ EI++
Sbjct: 191 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 175
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 121 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 175
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 215
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 174
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 21/201 (10%)
Query: 353 KLGEGGFGEVYKGVLPSGQEIAV----KRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+LG+G FG+VYK +E +V K + S + +++ E+ ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 409 -GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
F E IL+ EF ++D + E E+ L S+ + + YLH++
Sbjct: 101 DAFYYENNLWILI-EFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 468 RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM---- 523
+IIHRDLKA NIL + + K++DFG++ +T + +GT +MAPE M
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 524 -HGQFSVKSDVYSFGVLVLEI 543
+ K+DV+S G+ ++E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLGF 410
K+GEG +G VYK G+ A+K++ G E+ ++ +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 411 CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
+ +LV+E + ++ L L E + ++ + + + GI Y H+ R++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLL--QLLNGIAYCHDR---RVL 122
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM-HGQFSV 529
HRDLK N+L++ E KI+DFG+A+ FG+ + T+ +V T Y AP+ M ++S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 530 KSDVYSFGVLVLEIITG 546
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLGF 410
K+GEG +G VYK G+ A+K++ G E+ ++ +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 411 CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
+ +LV+E + ++ L L E + ++ + + + GI Y H+ R++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLL--QLLNGIAYCHDR---RVL 122
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM-HGQFSV 529
HRDLK N+L++ E KI+DFG+A+ FG+ + T+ +V T Y AP+ M ++S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 530 KSDVYSFGVLVLEIITG 546
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 174
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 214
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 216
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+ ++ + G E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 213
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+ ++ + G E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + T+ +V T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 212
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 14/221 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 174
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 212
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 177
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ ++ L F+ + + + + +G+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 174
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHR 402
NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V+LL + LV+EF+ ++ L F+ + + + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 176
Query: 523 MHGQ-FSVKSDVYSFGVLVLEIITGK 547
+ + +S D++S G + E++T +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LGEG FG+V +G+ +AVK L G Q +K E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 408 LGFCLEGEEKIL--VYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + EK L V E+VP SL +L + + ++ I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHSQ- 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAPE 520
IHR+L A N+LLD + KI DFG+AK +G+ V G + APE
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFWYAPE 190
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F SDV+SFGV + E++T
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ + L + Y + + +G+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 119
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 174
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 214
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 30/233 (12%)
Query: 327 DITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG 385
D++ L FE +E+ +G G +G+VYKG + +GQ A+K + +G
Sbjct: 15 DLSALRDPAGIFELVEL----------VGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDE 63
Query: 386 GQEFKNEVVLVAKL-QHRNLVRLLGFCLE------GEEKILVYEFVPNKSLDYFLYEPEK 438
+E K E+ ++ K HRN+ G ++ ++ LV EF S+ L + K
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTK 122
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF 498
L I I RG+ +LH+ ++IHRD+K N+LL K+ DFG++
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA-- 177
Query: 499 GVDQTQGNTNRIVGTYGYMAPEYAM-----HGQFSVKSDVYSFGVLVLEIITG 546
+D+T G N +GT +MAPE + KSD++S G+ +E+ G
Sbjct: 178 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+EF+ + L + Y + + +G+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 29/244 (11%)
Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRL 378
PE+N + SLQ I++ +F LG+G FG+V+ + Q A+K L
Sbjct: 1 PELNKER-----PSLQ-----IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL 50
Query: 379 SRSSGQGGQEFK----NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLY 434
+ + + + VL +H L + E V E++ L +Y
Sbjct: 51 KKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MY 107
Query: 435 EPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
+ + D SR I G+ +LH I++RDLK NILLD + + KI+DFGM
Sbjct: 108 HIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM 164
Query: 495 AK--IFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSF 552
K + G TN GT Y+APE + +++ D +SFGVL+ E++ G+ S F
Sbjct: 165 CKENMLG----DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPF 218
Query: 553 YQTD 556
+ D
Sbjct: 219 HGQD 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LGEG FG+V +G+ +AVK L G Q +K E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 408 LGFCLEGEEKIL--VYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + EK L V E+VP SL +L + + ++ I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQ- 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAPE 520
IHR+L A N+LLD + KI DFG+AK +G+ V G + APE
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFWYAPE 190
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F SDV+SFGV + E++T
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 33/207 (15%)
Query: 353 KLGEGGFGEVYKGVLPSGQEIAV----KRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+LG+G FG+VYK +E +V K + S + +++ E+ ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 409 -GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
F E IL+ EF ++D + E E+ L S+ + + YLH++
Sbjct: 101 DAFYYENNLWILI-EFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 468 RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI------VGTYGYMAPEY 521
+IIHRDLKA NIL + + K++DFG+ + NT I +GT +MAPE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGV--------SAKNTRXIQRRDSFIGTPYWMAPEV 206
Query: 522 AM-----HGQFSVKSDVYSFGVLVLEI 543
M + K+DV+S G+ ++E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 33/207 (15%)
Query: 353 KLGEGGFGEVYKGVLPSGQEIAV----KRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+LG+G FG+VYK +E +V K + S + +++ E+ ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 409 -GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
F E IL+ EF ++D + E E+ L S+ + + YLH++
Sbjct: 101 DAFYYENNLWILI-EFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 468 RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI------VGTYGYMAPEY 521
+IIHRDLKA NIL + + K++DFG+ + NT I +GT +MAPE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGV--------SAKNTRXIQRRDXFIGTPYWMAPEV 206
Query: 522 AM-----HGQFSVKSDVYSFGVLVLEI 543
M + K+DV+S G+ ++E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LGEG FG+V +G+ +AVK L +G Q +K E+ ++ L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 408 LGFCLE-GEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C + G + LV E+VP SL +L + + ++ I G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQ- 153
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAPE 520
IHRDL A N+LLD + KI DFG+AK +G+ V G + APE
Sbjct: 154 --HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEXYRVREDGDSPVFWYAPE 207
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F SDV+SFGV + E++T
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 186 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 344 ATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQ 400
+ NF K+GEG +G VYK +G+ +A+K++ + G E+ L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N+V+LL + LV+E V ++ L F+ + + + + +G+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H R++HRDLK N+L++ E K++DFG+A+ FGV + + +V T Y APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLL 562
+ + +S D++S G + E++T + + + D D L
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDSEIDQL 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 38/252 (15%)
Query: 326 NDITTLESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKG-VLPSGQE-----IAVKRL 378
N T ++ Q + E E NN LG G FG+V + G+E +AVK L
Sbjct: 10 NSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML 69
Query: 379 SRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL--- 433
++ +E +E+ +++ L QH N+V LLG C G +++ E+ L FL
Sbjct: 70 KSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 129
Query: 434 -----------------YEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKA 476
+ E + L+ +A+G+ +L + IHRD+ A
Sbjct: 130 AEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAA 186
Query: 477 SNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHGQFSVKSDV 533
N+LL KI DFG+A+ D +GN V +MAPE ++V+SDV
Sbjct: 187 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK---WMAPESIFDCVYTVQSDV 243
Query: 534 YSFGVLVLEIIT 545
+S+G+L+ EI +
Sbjct: 244 WSYGILLWEIFS 255
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 353 KLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGG-------------QEFKNEVVLVAK 398
KLG G +GEV +G E A+K + +S G +E NE+ L+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGI 458
L H N+++L + + LV EF L + K + D + I+ I GI
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN---IMKQILSGI 159
Query: 459 LYLHEDSRLRIIHRDLKASNILLDAE---MNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
YLH+ + I+HRD+K NILL+ + +N KI DFG++ F D + +GT
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR---LGTAY 213
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
Y+APE + +++ K DV+S GV++ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 201 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSG---QEIAVKRLSR-SSGQGGQEFKNEVVLVAKL-Q 400
N+ + +GEG FG+V K + + A+KR+ +S ++F E+ ++ KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII--------- 451
H N++ LLG C L E+ P+ +L FL K + L+ + I
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSS 138
Query: 452 -------GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ 504
+ARG+ YL S+ + IHR+L A NIL+ KI+DFG+++
Sbjct: 139 QQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR-------- 187
Query: 505 GNTNRIVGTYG-----YMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
G + T G +MA E + ++ SDV+S+GVL+ EI++
Sbjct: 188 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 351 DNKLGEGGFGEVYKG-----VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + + E E ++ +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ----TQGNTNRIVGTYGYMAPEY 521
+HRDL A N+LL + KISDFG++K D+ Q + V Y APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APEC 201
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS KSDV+SFGVL+ E +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 351 DNKLGEGGFGEVYKG-----VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + + E E ++ +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ----TQGNTNRIVGTYGYMAPEY 521
+HRDL A N+LL + KISDFG++K D+ Q + V Y APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APEC 201
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS KSDV+SFGVL+ E +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 242 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 194 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 193 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 190 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-----EFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + E E ++ +L + +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ----TQGNTNRIVGTYGYMAPEY 521
+HRDL A N+LL + KISDFG++K D+ Q + V Y APE
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APEC 181
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS KSDV+SFGVL+ E +
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 38/255 (14%)
Query: 323 NADNDITTLESLQFDFE-TIEVATNNFSTDNKLGEGGFGEVYK----GVLPSGQ--EIAV 375
++DN+ ++ +++++ E N LG G FG+V G+ +G ++AV
Sbjct: 21 SSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAV 80
Query: 376 KRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL 433
K L + +E +E+ ++ +L H N+V LLG C L++E+ L +L
Sbjct: 81 KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
Query: 434 -----------YEPEKQQQLDWSRRYKIIG---------GIARGILYLHEDSRLRIIHRD 473
E E Q++L+ ++ +A+G+ +L S +HRD
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRD 197
Query: 474 LKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHGQFSVK 530
L A N+L+ KI DFG+A+ D +GN V +MAPE G +++K
Sbjct: 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIK 254
Query: 531 SDVYSFGVLVLEIIT 545
SDV+S+G+L+ EI +
Sbjct: 255 SDVWSYGILLWEIFS 269
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 201 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 201 HHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 351 DNKLGEGGFGEVYKG-----VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + + E E ++ +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVD------QTQGNTNRIVGTYGYMAP 519
+HRDL A N+LL + KISDFG++K D QT G + AP
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW-----PVKWYAP 183
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E + +FS KSDV+SFGVL+ E +
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L FC + +EK+ + N L ++ K D + I + Y
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 152
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS--SGQGGQEFKNEVVL 395
+TI + T + +G G +G V + SG +IAVK+LSR S + E+ L
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P SL+ F L K Q+L
Sbjct: 104 LKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKL 151
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 152 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 203
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ +++ D++S G ++ E++TG+
Sbjct: 204 TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-----EFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + E E ++ +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ----TQGNTNRIVGTYGYMAPEY 521
+HRDL A N+LL + KISDFG++K D+ Q + V Y APE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APEC 185
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS KSDV+SFGVL+ E +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 32/230 (13%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRL-SRSSGQGGQEFKNE 392
E+ + LGEG FG+V K ++AVK L S ++ + + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL---------------YEP 436
+ ++ + +H+N++ LLG C + ++ E+ +L +L + P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 437 EKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK 496
E +QL +ARG+ YL + + IHRDL A N+L+ + KI+DFG+A+
Sbjct: 144 E--EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 497 -IFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
I +D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 199 DIHHIDXXKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 351 DNKLGEGGFGEVYKG-----VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + + E E ++ +L + +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 145
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ----TQGNTNRIVGTYGYMAPEY 521
+HRDL A N+LL + KISDFG++K D+ Q + V Y APE
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APEC 199
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS KSDV+SFGVL+ E +
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-----EFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + E E ++ +L + +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 125
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ----TQGNTNRIVGTYGYMAPEY 521
+HRDL A N+LL + KISDFG++K D+ Q + V Y APE
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APEC 179
Query: 522 AMHGQFSVKSDVYSFGVLVLEIIT 545
+ +FS KSDV+SFGVL+ E +
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 351 DNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQ-----EFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + E E ++ +L + +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 137
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVD------QTQGNTNRIVGTYGYMAP 519
+HRDL A N+LL + KISDFG++K D QT G + AP
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-----PVKWYAP 189
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E + +FS KSDV+SFGVL+ E +
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSR---SSGQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LGEG FG+V + Q++A+K +SR + E+ + L+H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ ++V E+ + DY + +K+ D RR+ I I Y H R +I
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRF--FQQIICAIEYCH---RHKI 129
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEYAMHGQFS 528
+HRDLK N+LLD +N KI+DFG++ I T GN + G+ Y APE ++G+
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE-VINGKLY 184
Query: 529 V--KSDVYSFGVLVLEIITGK 547
+ DV+S G+++ ++ G+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LGEG FG+V +G+ +AVK L G Q ++ E+ ++ L H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 408 LGFCL-EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C +GE+ + LV E+VP SL +L + + ++ I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAPE 520
IHR L A N+LLD + KI DFG+AK +G+ V G + APE
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFWYAPE 185
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F SDV+SFGV + E++T
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKG------VLPSGQEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + + + +AVK L +
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 74
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 437 EKQQQL--DWSRRYKIIG---GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISD 491
K + L D+ +I +A+G+ +L + + IHRDL A NILL + KI D
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICD 191
Query: 492 FGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
FG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K+ D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 191
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 354 LGEGGFGEVYKGVLP-----SGQEIAVKRLSRSSG-QGGQEFKNEVVLVAKLQHRNLVRL 407
LGEG FG+V +G+ +AVK L G Q ++ E+ ++ L H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 408 LGFCL-EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C +GE+ + LV E+VP SL +L + + ++ I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG-----YMAPE 520
IHR L A N+LLD + KI DFG+AK +G+ V G + APE
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFWYAPE 184
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIIT 545
+F SDV+SFGV + E++T
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 351 DNKLGEGGFGEVYKG-----VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + + E E ++ +L + +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 489
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVD------QTQGNTNRIVGTYGYMAP 519
+HRDL A N+LL + KISDFG++K D QT G + AP
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-----PVKWYAP 541
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E + +FS KSDV+SFGVL+ E +
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+AVK + ++ + Q+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + LV E+ + DY + +++ ++ +I+ + Y
Sbjct: 74 NIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----Y 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAP 519
H+ I+HRDLKA N+LLDA+MN KI+DFG + F T GN + G+ Y AP
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAP 181
Query: 520 EYAMHGQFS-VKSDVYSFGVLVLEIITG 546
E ++ + DV+S GV++ +++G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 107/236 (45%), Gaps = 45/236 (19%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQEFKNEVV 394
DFE I V LG+G FG+V K L S + A+K++ R + + +EV+
Sbjct: 7 DFEEIAV----------LGQGAFGQVVKARNALDS-RYYAIKKI-RHTEEKLSTILSEVM 54
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKI-------------LVYEFVPNKSLDYFLYEPEKQQQ 441
L+A L H+ +VR LE + + E+ N++L ++ QQ
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 442 LDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK----- 496
D +++ I + Y+H IIHRDLK NI +D N KI DFG+AK
Sbjct: 115 RD--EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 497 --IFGVDQ-----TQGNTNRIVGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEII 544
I +D + N +GT Y+A E G ++ K D+YS G++ E+I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 351 DNKLGEGGFGEVYKG-----VLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
D +LG G FG V KG + + + + + E E ++ +L + +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
R++G C E E +LV E L+ +L ++ + + +++ ++ G+ YL E +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN 490
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVD------QTQGNTNRIVGTYGYMAP 519
+HRDL A N+LL + KISDFG++K D QT G + AP
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-----PVKWYAP 542
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIIT 545
E + +FS KSDV+SFGVL+ E +
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + VL +G+E+AVK + ++ + Q+ EV ++ L H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+V+L +E E+ + LV E+ + +L + ++ + +++ I + Y
Sbjct: 75 NIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYC 130
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAPE 520
H+ I+HRDLKA N+LLD +MN KI+DFG + F V GN + G+ Y APE
Sbjct: 131 HQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV----GNKLDTFCGSPPYAAPE 183
Query: 521 YAMHGQFS-VKSDVYSFGVLVLEIITG 546
++ + DV+S GV++ +++G
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+AVK + ++ + Q+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + LV E+ + DY + +++ ++ +I+ + Y
Sbjct: 74 NIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----Y 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAP 519
H+ I+HRDLKA N+LLDA+MN KI+DFG + F T GN + G+ Y AP
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAP 181
Query: 520 EYAMHGQFS-VKSDVYSFGVLVLEIITG 546
E ++ + DV+S GV++ +++G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 354 LGEGGFGEVY--KGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
LG G F EV+ K L +G+ A+K + +S +NE+ ++ K++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
LV + V L + E + D S +I + + YLHE+ I+H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHENG---IVH 129
Query: 472 RDLKASNIL-LDAEMNPKI--SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFS 528
RDLK N+L L E N KI +DFG++K+ + G + GT GY+APE +S
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 529 VKSDVYSFGVLVLEIITG 546
D +S GV+ ++ G
Sbjct: 186 KAVDCWSIGVITYILLCG 203
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 30/222 (13%)
Query: 357 GGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGE- 415
G FG V+K L +AVK Q Q + E+ ++H NL++ + G
Sbjct: 26 GRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 416 ---EKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED-------- 464
E L+ F SL +L K + W+ + ++RG+ YLHED
Sbjct: 84 LEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 465 SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
+ I HRD K+ N+LL +++ ++DFG+A F + G+T+ VGT YMAPE +
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLE 198
Query: 525 GQFS------VKSDVYSFGVLVLEIITGKKNSSFYQTDGAAD 560
G + ++ D+Y+ G+++ E+++ K + DG D
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAA-----DGPVD 235
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 21/232 (9%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKG------VLPSGQEIAVKRLSRSSGQG 385
E L +D E + + LG G FG+V + + + +AVK L +
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 437 EKQQQLDWSRRYKIIG---GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
K D+ +I +A+G+ +L + + IHRDL A NILL + KI DFG
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFG 189
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 27/216 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVA 397
++ N+ +G+G F +V + +L +G+E+AVK + ++ + Q+ EV ++
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 61
Query: 398 KLQHRNLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFL---YEPEKQQQLDWSRRYKIIG 452
L H N+V+L +E E+ + LV E+ + DY + + EK+ + + +
Sbjct: 62 VLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ------ 114
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIV 511
I + Y H+ I+HRDLKA N+LLDA+MN KI+DFG + F T GN +
Sbjct: 115 -IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFC 166
Query: 512 GTYGYMAPEYAMHGQFS-VKSDVYSFGVLVLEIITG 546
G+ Y APE ++ + DV+S GV++ +++G
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 21/208 (10%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+AVK + ++ + Q+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + LV E+ + DY + +++ ++ +I+ + Y
Sbjct: 74 NIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----Y 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAP 519
H+ I+HRDLKA N+LLDA+MN KI+DFG + F T GN + G Y AP
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAP 181
Query: 520 EYAMHGQFS-VKSDVYSFGVLVLEIITG 546
E ++ + DV+S GV++ +++G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 21/232 (9%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKG------VLPSGQEIAVKRLSRSSGQG 385
E L +D E + + LG G FG+V + + + +AVK L +
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 437 EKQQQLDWSRRYKIIG---GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
K D+ +I +A+G+ +L + + IHRDL A NILL + KI DFG
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFG 189
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+AV+ + ++ + Q+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + LV E+ + DY + +++ ++ +I+ + Y
Sbjct: 74 NIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----Y 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAP 519
H+ I+HRDLKA N+LLDA+MN KI+DFG + F T GN + G+ Y AP
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAP 181
Query: 520 EYAMHGQFS-VKSDVYSFGVLVLEIITG 546
E ++ + DV+S GV++ +++G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDXXKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDXXKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+AV+ + ++ + Q+ EV ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + LV E+ + DY + +++ ++ +I+ + Y
Sbjct: 74 NIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----Y 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAP 519
H+ I+HRDLKA N+LLDA+MN KI+DFG + F T GN + G+ Y AP
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAP 181
Query: 520 EYAMHGQFS-VKSDVYSFGVLVLEIITG 546
E ++ + DV+S GV++ +++G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%)
Query: 368 PSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN 426
P +++A+KR++ Q E E+ +++ H N+V + +E LV + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 427 KS-LDYFLYEPEKQQQ----LDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL 481
S LD + K + LD S I+ + G+ YLH++ + IHRD+KA NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 482 DAEMNPKISDFGMAKIF--GVDQTQGNTNR-IVGTYGYMAPEYAMHGQ-FSVKSDVYSFG 537
+ + +I+DFG++ G D T+ + VGT +MAPE + + K+D++SFG
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 209
Query: 538 VLVLEIITG 546
+ +E+ TG
Sbjct: 210 ITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%)
Query: 368 PSGQEIAVKRLSRSSGQGG-QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPN 426
P +++A+KR++ Q E E+ +++ H N+V + +E LV + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 427 KS-LDYFLYEPEKQQQ----LDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL 481
S LD + K + LD S I+ + G+ YLH++ + IHRD+KA NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 482 DAEMNPKISDFGMAKIF--GVDQTQGNTNR-IVGTYGYMAPEYAMHGQ-FSVKSDVYSFG 537
+ + +I+DFG++ G D T+ + VGT +MAPE + + K+D++SFG
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 214
Query: 538 VLVLEIITG 546
+ +E+ TG
Sbjct: 215 ITAIELATG 223
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + + LG G FG+V + G+ + + +AVK L +
Sbjct: 14 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 73
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL--------- 433
+E+ +L+ H N+V LLG C + G +++ EF +L +L
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 434 YEPEKQQQLDWSRRYKIIG---GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKIS 490
Y+ + D+ +I +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 491 DFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
S SD+++ G ++ +++ G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKLQH 401
++F LG+G FG VY + I A+K L +S + + + E+ + + L+H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++R+ + + + L+ EF P L E +K + D R + +A + Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEELADALHYC 131
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
HE ++IHRD+K N+L+ + KI+DFG + V + GT Y+ PE
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEM 184
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITG 546
K D++ GVL E + G
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 40/227 (17%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVV 394
DF+ IE+ +G GGFG+V+K G+ +KR+ ++ ++ + EV
Sbjct: 11 MDFKEIEL----------IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVK 56
Query: 395 LVAKLQHRNLVRLLGFCLEG---------------EEKILV--YEFVPNKSLDYFLYEPE 437
+AKL H N+V G C +G + K L EF +L+ ++ E
Sbjct: 57 ALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKR 114
Query: 438 KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKI 497
+ ++LD ++ I +G+ Y+H ++I+RDLK SNI L KI DFG+
Sbjct: 115 RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
D G R GT YM+PE + + D+Y+ G+++ E++
Sbjct: 172 LKND---GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNEVVLVAKLQH 401
++F LG+G FG VY + I A+K L +S + + + E+ + + L+H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N++R+ + + + L+ EF P L E +K + D R + +A + Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
HE ++IHRD+K N+L+ + KI+DFG + V + GT Y+ PE
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITG 546
K D++ GVL E + G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 334 LQFDF-ETIEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQ---GGQE 388
LQ+ + E V N F LG+GGFGEV V +G+ A K+L + + G
Sbjct: 171 LQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 389 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRR 447
NE ++ K+ R +V L + E ++ + LV + L + +Y Q +R
Sbjct: 231 ALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYH-MGQAGFPEARA 288
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
I G+ LH R RI++RDLK NILLD + +ISD G+A V +G T
Sbjct: 289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQT 341
Query: 508 NR-IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+ VGT GYMAPE + +++ D ++ G L+ E+I G+ S F Q
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQ 387
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 354 LGE-GGFGEVYKGVLPSGQEIAV----KRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+GE G FG+VYK +E +V K + S + +++ E+ ++A H N+V+LL
Sbjct: 17 IGELGDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 409 -GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
F E IL+ EF ++D + E E+ L S+ + + YLH++
Sbjct: 74 DAFYYENNLWILI-EFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHDN--- 127
Query: 468 RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM---- 523
+IIHRDLKA NIL + + K++DFG++ Q + +GT +MAPE M
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQ-RRDSFIGTPYWMAPEVVMCETS 186
Query: 524 -HGQFSVKSDVYSFGVLVLEI 543
+ K+DV+S G+ ++E+
Sbjct: 187 KDRPYDYKADVWSLGITLIEM 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 352 NKLGEGGFGEVY---KGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
KLG G +GEV V + I + R + S + EV ++ L H N+++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
F + LV E L + K ++D + II + G+ YLH+ +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHKHN--- 156
Query: 469 IIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
I+HRDLK N+LL+++ KI DFG++ +F + Q +GT Y+APE +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPE-VLRK 212
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
++ K DV+S GV++ ++ G
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDYYKNTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAK 398
V ++ + LG G FG+V G +G ++AVK L+R + + + E+ +
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARG 457
+H ++++L + +V E+V L DY K +LD ++ I G
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSG 128
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGY 516
+ Y H R ++HRDLK N+LLDA MN KI+DFG++ + + G R G+ Y
Sbjct: 129 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRXSCGSPNY 181
Query: 517 MAPEYAMHGQFSV--KSDVYSFGVLVLEIITG 546
APE + G+ + D++S GV++ ++ G
Sbjct: 182 AAPE-VISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEF-----KNEVVLV 396
+AT+ + ++G G +G VYK P SG +A+K + +G GG EV L+
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 397 AKLQ---HRNLVRLLGFCL----EGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRY 448
+L+ H N+VRL+ C + E K+ LV+E V Y P + +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-- 123
Query: 449 KIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTN 508
++ RG+ +LH + I+HRDLK NIL+ + K++DFG+A+I+ Q
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALT 177
Query: 509 RIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+V T Y APE + ++ D++S G + E+ K
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 41/234 (17%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQEFKNEVV 394
DFE I V LG+G FG+V K L S + A+K++ R + + +EV+
Sbjct: 7 DFEEIAV----------LGQGAFGQVVKARNALDS-RYYAIKKI-RHTEEKLSTILSEVM 54
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS-----LDY----FLYEPEKQQQLDWS 445
L+A L H+ +VR LE + V KS ++Y LY+ + L+
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 446 RR--YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK------- 496
R +++ I + Y+H IIHRDLK NI +D N KI DFG+AK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 497 IFGVDQ-----TQGNTNRIVGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEII 544
I +D + N +GT Y+A E G ++ K D+YS G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 334 LQFDF-ETIEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQ---GGQE 388
LQ+ + E V N F LG+GGFGEV V +G+ A K+L + + G
Sbjct: 171 LQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 389 FKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRR 447
NE ++ K+ R +V L + E ++ + LV + L + +Y Q +R
Sbjct: 231 ALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYH-MGQAGFPEARA 288
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT 507
I G+ LH R RI++RDLK NILLD + +ISD G+A V +G T
Sbjct: 289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQT 341
Query: 508 NR-IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+ VGT GYMAPE + +++ D ++ G L+ E+I G+ S F Q
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQ 387
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 342 EVATNNFSTDN-----KLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG---QEFKNE 392
E+ F+ D+ LG+G FG VY + I A+K L +S + + + E
Sbjct: 5 EMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRRE 64
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIG 452
+ + + L+H N++R+ + + + L+ EF P L E +K + D R +
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFME 121
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG 512
+A + Y HE ++IHRD+K N+L+ + KI+DFG + V + G
Sbjct: 122 ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCG 174
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
T Y+ PE K D++ GVL E + G
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 15/218 (6%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQHRNLVRLLGF 410
+GEG +G V K +G+ +A+K+ S + E+ L+ +L+H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 411 CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRII 470
C + + LV+EFV + LD P LD+ K + I GI + H + II
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSHN---II 146
Query: 471 HRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG-QFSV 529
HRD+K NIL+ K+ DFG A+ + V T Y APE + ++
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLVGDVKYGK 204
Query: 530 KSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSI 567
DV++ G LV E+ G+ + D D L ++ +
Sbjct: 205 AVDVWAIGCLVTEMFMGE---PLFPGDSDIDQLYHIMM 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 25/236 (10%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 50 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 109
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL------YEP 436
+E+ +L+ H N+V LLG C + G +++ EF +L +L + P
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 437 EKQQQLDWSRRYKIIGG-------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKI 489
K D + + + +A+G+ +L + + IHRDL A NILL + KI
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 226
Query: 490 SDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
DFG+A+ D +MAPE ++++SDV+SFGVL+ EI +
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 38/260 (14%)
Query: 315 KYNAVPEVNADNDITTLESLQFDFE-TIEVATNNFSTDNKLGEGGFGEVYK----GVLPS 369
++ V E+N +N + ++ Q ++ E N S LG G FG+V + G++ S
Sbjct: 8 QWKVVEEINGNNXVX-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 66
Query: 370 --GQEIAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVP 425
+AVK L S+ +E +E+ +++ L H N+V LLG C G +++ E+
Sbjct: 67 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 126
Query: 426 NKSLDYFLYEPEKQQQLDWSRRYKIIGG-----------------IARGILYLHEDSRLR 468
L FL K+ S+ I +A+G+ +L +
Sbjct: 127 YGDLLNFLRR--KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--- 181
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHG 525
IHRDL A NILL KI DFG+A+ D +GN V +MAPE +
Sbjct: 182 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNC 238
Query: 526 QFSVKSDVYSFGVLVLEIIT 545
++ +SDV+S+G+ + E+ +
Sbjct: 239 VYTFESDVWSYGIFLWELFS 258
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 344 ATNNFSTDNK---LGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
A N+F T +K LG G FG+V+K +G ++A K + + +E KNE+ ++ +L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGI 458
H NL++L + +LV E+V L D + E +LD + I GI
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGI 200
Query: 459 LYLHEDSRLRIIHRDLKASNILL---DAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
++H+ + I+H DLK NIL DA+ KI DFG+A+ + + + GT
Sbjct: 201 RHMHQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRY---KPREKLKVNFGTPE 253
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
++APE + S +D++S GV+ +++G
Sbjct: 254 FLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 170
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 340 TIEVATNNFSTDN-----KLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQG---GQEFK 390
T ++ T +F+ D+ LG+G FG VY I A+K L +S + + +
Sbjct: 12 TPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 71
Query: 391 NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKI 450
E+ + A L H N++RL + + L+ E+ P L E +K D R I
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL---YKELQKSCTFDEQRTATI 128
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI 510
+ +A ++Y H ++IHRD+K N+LL + KI+DFG + V +
Sbjct: 129 MEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTM 181
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
GT Y+ PE + K D++ GVL E++ G
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAV-KRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLGF 410
+G G +G K S +I V K L S Q +EV L+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 411 CLEGEEKIL--VYEFVPNKSLDYFLYEPEKQQQ-LDWSRRYKIIGGIARGILYLHE--DS 465
++ L V E+ L + + K++Q LD +++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
++HRDLK +N+ LD + N K+ DFG+A+I D + T VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRM 191
Query: 526 QFSVKSDVYSFGVLVLEI 543
++ KSD++S G L+ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 170
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 171 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 63/245 (25%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVV 394
DF+ IE+ +G GGFG+V+K G+ ++R+ ++ + +E K
Sbjct: 12 MDFKEIEL----------IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK---- 57
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVP---NKSLDYFLYEPE-------------- 437
+AKL H N+V G C +G +++ P + SL+ Y+PE
Sbjct: 58 ALAKLDHVNIVHYNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLF 110
Query: 438 ------------------KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNI 479
+ ++LD ++ I +G+ Y+H ++IHRDLK SNI
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNI 167
Query: 480 LLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVL 539
L KI DFG+ D G R GT YM+PE + + D+Y+ G++
Sbjct: 168 FLVDTKQVKIGDFGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 540 VLEII 544
+ E++
Sbjct: 225 LAELL 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 348 FSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHR 402
F LG G F EV VL +G+ AVK + + + +G + +NE+ ++ K++H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N+V L LV + V L + E + D S +I + + YLH
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH 137
Query: 463 EDSRLRIIHRDLKASNILL---DAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
R+ I+HRDLK N+L D E ISDFG++K+ G GT GY+AP
Sbjct: 138 ---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA---CGTPGYVAP 191
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E +S D +S GV+ ++ G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 254 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LG+GGF + ++ +E+ ++ S ++ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
F + + +V E +SL L++ K +R Y + I G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYY--LRQIVLGCQYLH---RNRV 138
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
IHRDLK N+ L+ ++ KI DFG+A D + T + GT Y+APE S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 530 KSDVYSFGVLVLEIITGK 547
+ DV+S G ++ ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LG+GGF + ++ +E+ ++ S ++ E+ + L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
F + + +V E +SL L++ K +R Y + I G YLH R R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYY--LRQIVLGCQYLH---RNRV 142
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
IHRDLK N+ L+ ++ KI DFG+A D + T + GT Y+APE S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 530 KSDVYSFGVLVLEIITGK 547
+ DV+S G ++ ++ GK
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 195 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 41/228 (17%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEY---AMHGQFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE AMH +V D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNAMHYNQTV--DIWSVGCIMAELLTGR 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 122
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
++N+ +LG+G F V + V + G E A K ++ + S + Q+ + E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I I Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESIAYC 120
Query: 462 HEDSRLRIIHRDLKASNILLDAEMN---PKISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H + I+HR+LK N+LL ++ K++DFG+A V+ ++ + GT GY++
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPGYLS 174
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE +S D+++ GV++ ++ G
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LG+GGF + ++ +E+ ++ S ++ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
F + + +V E +SL L++ K +R Y + I G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYY--LRQIVLGCQYLH---RNRV 138
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
IHRDLK N+ L+ ++ KI DFG+A D + T + GT Y+APE S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 530 KSDVYSFGVLVLEIITGK 547
+ DV+S G ++ ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 144
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 35/234 (14%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGG-QEFKNEVV 394
E N LGEG FG+V K +AVK L ++ ++ +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK-------------QQQ 441
++ ++ H ++++L G C + +L+ E+ SL FL E K
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 442 LDWSRRYKIIGG--------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
LD + G I++G+ YL E ++++HRDL A NIL+ KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 494 MAKIFGVDQTQGNTNRIVG--TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+++ V + R G +MA E ++ +SDV+SFGVL+ EI+T
Sbjct: 196 LSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 200 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
++N+ +LG+G F V + V + G E A K ++ + S + Q+ + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I I Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESIAYC 121
Query: 462 HEDSRLRIIHRDLKASNILLDAEMN---PKISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H + I+HR+LK N+LL ++ K++DFG+A V+ ++ + GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPGYLS 175
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE +S D+++ GV++ ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 35/234 (14%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGG-QEFKNEVV 394
E N LGEG FG+V K +AVK L ++ ++ +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK-------------QQQ 441
++ ++ H ++++L G C + +L+ E+ SL FL E K
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 442 LDWSRRYKIIGG--------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
LD + G I++G+ YL E ++++HRDL A NIL+ KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 494 MAK-IFGVDQ-TQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+++ ++ D + + RI +MA E ++ +SDV+SFGVL+ EI+T
Sbjct: 196 LSRDVYEEDSYVKRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 125
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 144
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 124
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 197 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 123
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRLLGFC 411
LG G F EV Q+ +A+K +++ + +G + +NE+ ++ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
G L+ + V L + E + D SR +I + + YLH+ L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 472 RDLKASNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAPEYAMHGQF 527
RDLK N+L LD + ISDFG++K+ + G+ + GT GY+APE +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 528 SVKSDVYSFGVLVLEIITG 546
S D +S GV+ ++ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 180
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 340 TIEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
++EV ++ +LG G +G V K +PSGQ +AVKR+ + Q+ +++
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK---RLLMDLD 57
Query: 399 LQHRNL-----VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP-EKQQQLDWSRRYKIIG 452
+ R + V G + + E + + SLD F + +K Q + KI
Sbjct: 58 ISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG 512
I + + +LH S+L +IHRD+K SN+L++A K+ DFG++ + VD + + G
Sbjct: 117 SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDID--AG 171
Query: 513 TYGYMAPEYA----MHGQFSVKSDVYSFGVLVLEI 543
YMAPE +SVKSD++S G+ ++E+
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 148
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 150
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGE-VYKGVLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ E+ +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ +I+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
++N+ +LG+G F V + V + G E A K ++ + S + Q+ + E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I I Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESIAYC 121
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H + I+HR+LK N+LL ++ K++DFG+A V+ ++ + GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPGYLS 175
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE +S D+++ GV++ ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 145
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 148
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 194
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 94 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 193
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRLLGFC 411
LG G F EV Q+ +A+K +++ + +G + +NE+ ++ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
G L+ + V L + E + D SR +I + + YLH+ L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 472 RDLKASNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAPEYAMHGQF 527
RDLK N+L LD + ISDFG++K+ + G+ + GT GY+APE +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 528 SVKSDVYSFGVLVLEIITG 546
S D +S GV+ ++ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 13/237 (5%)
Query: 315 KYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI- 373
K +A P + D L+ + D + LG+GGF + Y+ +E+
Sbjct: 12 KPSAKPSAHVDPKSAPLKEIP-DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVF 70
Query: 374 AVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD 430
A K + +S ++ E+ + L + ++V GF + + +V E +SL
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL- 129
Query: 431 YFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKIS 490
++ + RY + I +G+ YLH + R+IHRDLK N+ L+ +M+ KI
Sbjct: 130 -LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 491 DFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
DFG+A D + T + GT Y+APE S + D++S G ++ ++ GK
Sbjct: 185 DFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 194
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 195 TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK---NEVVLVAKLQH 401
+F LGEG F V L + +E A+K L + + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 402 RNLVRLLGFCLEGEEKILV-YEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
V+L F + +EK+ + N L ++ K D + I + Y
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEY 147
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LH IIHRDLK NILL+ +M+ +I+DFG AK+ + Q N VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
SD+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRLLGFC 411
LG G F EV Q+ +A+K +++ + +G + +NE+ ++ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
G L+ + V L + E + D SR +I + + YLH+ L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 472 RDLKASNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAPEYAMHGQF 527
RDLK N+L LD + ISDFG++K+ + G+ + GT GY+APE +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 528 SVKSDVYSFGVLVLEIITG 546
S D +S GV+ ++ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 38/260 (14%)
Query: 315 KYNAVPEVNADNDITTLESLQFDFE-TIEVATNNFSTDNKLGEGGFGEVYK----GVLPS 369
++ V E+N +N + ++ Q ++ E N S LG G FG+V + G++ S
Sbjct: 15 QWKVVEEINGNNYVY-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 370 --GQEIAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVP 425
+AVK L S+ +E +E+ +++ L H N+V LLG C G +++ E+
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 426 NKSLDYFLYEPEKQQQLDWSRRYKIIGG-----------------IARGILYLHEDSRLR 468
L FL K+ S+ I +A+G+ +L +
Sbjct: 134 YGDLLNFLRR--KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--- 188
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHG 525
IHRDL A NILL KI DFG+A+ D +GN V +MAPE +
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPV---KWMAPESIFNC 245
Query: 526 QFSVKSDVYSFGVLVLEIIT 545
++ +SDV+S+G+ + E+ +
Sbjct: 246 VYTFESDVWSYGIFLWELFS 265
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S GV++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 38/260 (14%)
Query: 315 KYNAVPEVNADNDITTLESLQFDFE-TIEVATNNFSTDNKLGEGGFGEVYK----GVLPS 369
++ V E+N +N + ++ Q ++ E N S LG G FG+V + G++ S
Sbjct: 10 QWKVVEEINGNNYVY-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 68
Query: 370 --GQEIAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVP 425
+AVK L S+ +E +E+ +++ L H N+V LLG C G +++ E+
Sbjct: 69 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 128
Query: 426 NKSLDYFLYEPEKQQQLDWSRRYKIIGG-----------------IARGILYLHEDSRLR 468
L FL K+ S+ I +A+G+ +L +
Sbjct: 129 YGDLLNFLRR--KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--- 183
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHG 525
IHRDL A NILL KI DFG+A+ D +GN V +MAPE +
Sbjct: 184 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNC 240
Query: 526 QFSVKSDVYSFGVLVLEIIT 545
++ +SDV+S+G+ + E+ +
Sbjct: 241 VYTFESDVWSYGIFLWELFS 260
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 354 LGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQ-EFKNEVVLVAKLQHRNLVRLLGFC 411
LG G F EV Q+ +A+K +++ + +G + +NE+ ++ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
G L+ + V L + E + D SR +I + + YLH+ L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 472 RDLKASNIL---LDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAPEYAMHGQF 527
RDLK N+L LD + ISDFG++K+ + G+ + GT GY+APE +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 528 SVKSDVYSFGVLVLEIITG 546
S D +S GV+ ++ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----H 179
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 170
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 38/260 (14%)
Query: 315 KYNAVPEVNADNDITTLESLQFDFE-TIEVATNNFSTDNKLGEGGFGEVYK----GVLPS 369
++ V E+N +N + ++ Q ++ E N S LG G FG+V + G++ S
Sbjct: 15 QWKVVEEINGNNYVY-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 370 --GQEIAVKRLSRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVP 425
+AVK L S+ +E +E+ +++ L H N+V LLG C G +++ E+
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 426 NKSLDYFLYEPEKQQQLDWSRRYKIIGG-----------------IARGILYLHEDSRLR 468
L FL K+ S+ I +A+G+ +L +
Sbjct: 134 YGDLLNFLRR--KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--- 188
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHG 525
IHRDL A NILL KI DFG+A+ D +GN V +MAPE +
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNC 245
Query: 526 QFSVKSDVYSFGVLVLEIIT 545
++ +SDV+S+G+ + E+ +
Sbjct: 246 VYTFESDVWSYGIFLWELFS 265
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 120 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 171
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 120 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 171
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 85 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 132
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 133 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 184
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 185 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----H 179
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 179
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVLPS-GQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
++N+ +LG+G F V + V + G E A K ++ + S + Q+ + E + KLQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I I Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESIAYC 144
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H + I+HR+LK N+LL ++ K++DFG+A V+ ++ + GT GY++
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPGYLS 198
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE +S D+++ GV++ ++ G
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVL 61
Query: 401 HR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAVI 117
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D+ N VGT
Sbjct: 118 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEM---ANEFVGTRS 171
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 45/236 (19%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKG--VLPSGQEIAVKRLSRSSGQGGQEFKNEVV 394
DFE I V LG+G FG+V K L S + A+K++ R + + +EV
Sbjct: 7 DFEEIAV----------LGQGAFGQVVKARNALDS-RYYAIKKI-RHTEEKLSTILSEVX 54
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKI-------------LVYEFVPNKSLDYFLYEPEKQQQ 441
L+A L H+ +VR LE + + E+ N++L ++ QQ
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 442 LDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK----- 496
D +++ I + Y+H IIHR+LK NI +D N KI DFG+AK
Sbjct: 115 RD--EYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 497 --IFGVDQ-----TQGNTNRIVGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEII 544
I +D + N +GT Y+A E G ++ K D YS G++ E I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 73 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 120
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 121 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 172
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 173 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAKLQHRNLVRLL- 408
LG GG EV+ L +++AVK L + F+ E A L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 409 ---GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G +V E+V +L ++ + + R ++I + + + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAK-IFGVDQTQGNTNRIVGTYGYMAPEYAMH 524
IIHRD+K +NIL+ A K+ DFG+A+ I + T ++GT Y++PE A
Sbjct: 137 ---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
Query: 525 GQFSVKSDVYSFGVLVLEIITGK 547
+SDVYS G ++ E++TG+
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S GV++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 181
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 182 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 21/208 (10%)
Query: 347 NFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRS--SGQGGQEFKNEVVLVAKLQHR 402
N+ +G+G F +V + +L +G+E+AVK + ++ + Q+ EV + L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 403 NLVRLLGFCLEGEEKI-LVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N+V+L +E E+ + LV E+ + DY + +++ ++ +I+ + Y
Sbjct: 74 NIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ----Y 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT-NRIVGTYGYMAP 519
H+ I+HRDLKA N+LLDA+ N KI+DFG + F T GN + G Y AP
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAP 181
Query: 520 EYAMHGQFS-VKSDVYSFGVLVLEIITG 546
E ++ + DV+S GV++ +++G
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 179
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 74 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 121
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 122 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 173
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 174 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 176
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 176
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQV 57
Query: 400 QHR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAV 113
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTR 167
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 35/234 (14%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQGG-QEFKNEVV 394
E N LGEG FG+V K +AVK L ++ ++ +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK-------------QQQ 441
++ ++ H ++++L G C + +L+ E+ SL FL E K
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 442 LDWSRRYKIIGG--------IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
LD + G I++G+ YL E S ++HRDL A NIL+ KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 494 MAKIFGVDQTQGNTNRIVG--TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+++ V + R G +MA E ++ +SDV+SFGVL+ EI+T
Sbjct: 196 LSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 176
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 181
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 186
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 181
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 186
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 181
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQV 57
Query: 400 QHR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAV 113
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTR 167
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 34/221 (15%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLS---RSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
KLG+G +G V+K + +G+ +AVK++ ++S + F+ ++L H N+V LL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 409 GFCLEGEEK--ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSR 466
++ LV+++ ++ L+ + L+ + ++ + + I YLH
Sbjct: 76 NVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 467 LRIIHRDLKASNILLDAEMNPKISDFGMAKIF-------------------GVDQTQGNT 507
++HRD+K SNILL+AE + K++DFG+++ F D Q
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 508 NRIVGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIITGK 547
V T Y APE + +++ D++S G ++ EI+ GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 345 TNNFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL 399
++ + KLG G +GEV K L +G E A+K + +SS +EV ++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H N+++L F + LV E L + +K ++D + I+ + G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTT 135
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
YLH+ + I+HRDLK N+LL+++ KI DFG++ F V G +GT Y
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERLGTAYY 189
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+APE + ++ K DV+S GV++ ++ G
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQV 57
Query: 400 QHR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAV 113
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTR 167
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 208 TKSIDIWSVGCILAEMLSNR 227
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 116 XQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 173 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 86 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----H 185
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 29/246 (11%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP----SGQEIAVKRLSRS--SGQG 385
+ L+ E + + F+ LG+G FG V + L S ++AVK L +
Sbjct: 9 DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD 68
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEK------ILVYEFVPNKSLDYFLYEP--- 436
+EF E + + H ++ +L+G L K +++ F+ + L FL
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG 128
Query: 437 EKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA- 495
E L + + IA G+ YL S IHRDL A N +L +M ++DFG++
Sbjct: 129 ENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 496 KIFGVD-QTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT-------GK 547
KI+ D QG +++ ++A E ++V SDV++FGV + EI+T G
Sbjct: 186 KIYSGDYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243
Query: 548 KNSSFY 553
+N+ Y
Sbjct: 244 ENAEIY 249
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 180
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 180
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAV-KRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLGF 410
+G G +G K S +I V K L S Q +EV L+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 411 CLEGEEKIL--VYEFVPNKSLDYFLYEPEKQQQ-LDWSRRYKIIGGIARGILYLHE--DS 465
++ L V E+ L + + K++Q LD +++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
++HRDLK +N+ LD + N K+ DFG+A+I D + VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRM 191
Query: 526 QFSVKSDVYSFGVLVLEI 543
++ KSD++S G L+ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+ EV ++ +LG G +G V K +PSGQ +AVKR+ + Q+ +++
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK---RLLMDL 100
Query: 398 KLQHRNL-----VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP-EKQQQLDWSRRYKII 451
+ R + V G + + E + + SLD F + +K Q + KI
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIA 159
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
I + + +LH S+L +IHRD+K SN+L++A K+ DFG++ + VD +
Sbjct: 160 VSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDSVAKTID--A 214
Query: 512 GTYGYMAPEYA----MHGQFSVKSDVYSFGVLVLEI 543
G YMAPE +SVKSD++S G+ ++E+
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVL 120
Query: 401 HR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAVI 176
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 177 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRS 230
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + G+ FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 239
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----H 176
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 86 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 185
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAKLQHRNLVRLL- 408
LG GG EV+ L +++AVK L + F+ E A L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 409 ---GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G +V E+V +L ++ + + R ++I + + + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIF---GVDQTQGNTNRIVGTYGYMAPEYA 522
IIHRD+K +NI++ A K+ DFG+A+ G TQ T ++GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAVIGTAQYLSPEQA 191
Query: 523 MHGQFSVKSDVYSFGVLVLEIITGK 547
+SDVYS G ++ E++TG+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ + +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 98 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 197
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 198 TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAKLQHRNLVRLL- 408
LG GG EV+ L +++AVK L + F+ E A L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 409 ---GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G +V E+V +L ++ + + R ++I + + + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIF---GVDQTQGNTNRIVGTYGYMAPEYA 522
IIHRD+K +NI++ A K+ DFG+A+ G TQ T ++GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAVIGTAQYLSPEQA 191
Query: 523 MHGQFSVKSDVYSFGVLVLEIITGK 547
+SDVYS G ++ E++TG+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQV 57
Query: 400 QHR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAV 113
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTR 167
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKL 399
+E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQV 57
Query: 400 QHR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAV 113
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTR 167
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF--LYEPEKQQQLDWSRRYK---- 449
+ ++H N++ LL F P +SL+ F +Y D + K
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 450 -------IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 170
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + G+ FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 191
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 194
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 94 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 193
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAV-KRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLGF 410
+G G +G K S +I V K L S Q +EV L+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 411 CLEGEEKIL--VYEFVPNKSLDYFLYEPEKQQQ-LDWSRRYKIIGGIARGILYLHE--DS 465
++ L V E+ L + + K++Q LD +++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
++HRDLK +N+ LD + N K+ DFG+A+I D+ VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRM 191
Query: 526 QFSVKSDVYSFGVLVLEI 543
++ KSD++S G L+ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K QQL + I RG+ Y+H + +
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+L++ + KI DFG+A+I + G V T Y APE ++ +
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY 225
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 146 LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPK----ISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L PK I DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPA 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 98 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 197
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 198 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 153
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 154 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 213
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 214 TKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 205
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 206 TKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 166 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSRS--SGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T +V Y Y APE + + D++S G ++ E+I G
Sbjct: 172 LARTAGTSFMM--TPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----H 180
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + G+ FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 191
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 239
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 173 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LG+GGF + ++ +E+ ++ S ++ E+ + L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
F + + +V E +SL L++ K +R Y + I G YLH R R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYY--LRQIVLGCQYLH---RNRV 160
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV-GTYGYMAPEYAMHGQFS 528
IHRDLK N+ L+ ++ KI DFG+A D G +++ GT Y+APE S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 529 VKSDVYSFGVLVLEIITGK 547
+ DV+S G ++ ++ GK
Sbjct: 218 FEVDVWSIGCIMYTLLVGK 236
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--FKNEVVLVAKLQHRNLVRLLG 409
++G G +G V K V PSGQ +AVKR+ + + Q+ + V++ +V+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL--HEDSRL 467
+ + E + ++ Y LD +I+G I + H L
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKY---VYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 468 RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY----AM 523
+IIHRD+K SNILLD N K+ DFG++ VD R G YMAPE A
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIA--KTRDAGCRPYMAPERIDPSAS 202
Query: 524 HGQFSVKSDVYSFGVLVLEIITG-----KKNSSFYQ 554
+ V+SDV+S G+ + E+ TG K NS F Q
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ 238
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 105
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 153
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 154 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 211 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 16/208 (7%)
Query: 346 NNFSTDNKLGEGGFGEVY---KGVLP-SGQEIAVKRLSRSSGQGGQEF--KNEVVLVAKL 399
++F LG+G FG+V+ K P SG A+K L +++ + K E ++A +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 400 QHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGI 458
H +V+L + + E K+ L+ +F+ + D F ++ + ++ + +A G+
Sbjct: 88 NHPFVVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKF-YLAELALGL 143
Query: 459 LYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
+LH L II+RDLK NILLD E + K++DFG++K +D + GT YMA
Sbjct: 144 DHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEK-KAYSFCGTVEYMA 198
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE S +D +S+GVL+ E++TG
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL----G 409
+G G +G VYKG L + +AVK S ++ Q KN + V ++H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDER 78
Query: 410 FCLEGE-EKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH------ 462
+G E +LV E+ PN SL +L DW ++ + RG+ YLH
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMA------KIFGVDQTQGNTNRIVGTYGY 516
+ + I HRDL + N+L+ + ISDFG++ ++ + VGT Y
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 517 MAPEYAMHGQFSVKS--------DVYSFGVLVLEI 543
MAPE + G +++ D+Y+ G++ EI
Sbjct: 195 MAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LG+GGF + ++ +E+ ++ S ++ E+ + L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
F + + +V E +SL L++ K +R Y + I G YLH R R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYY--LRQIVLGCQYLH---RNRV 136
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV-GTYGYMAPEYAMHGQFS 528
IHRDLK N+ L+ ++ KI DFG+A D G +++ GT Y+APE S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 529 VKSDVYSFGVLVLEIITGK 547
+ DV+S G ++ ++ GK
Sbjct: 194 FEVDVWSIGCIMYTLLVGK 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LG+GGF + ++ +E+ ++ S ++ E+ + L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
F + + +V E +SL L++ K +R Y + I G YLH R R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYY--LRQIVLGCQYLH---RNRV 162
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV-GTYGYMAPEYAMHGQFS 528
IHRDLK N+ L+ ++ KI DFG+A D G +++ GT Y+APE S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 529 VKSDVYSFGVLVLEIITGK 547
+ DV+S G ++ ++ GK
Sbjct: 220 FEVDVWSIGCIMYTLLVGK 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 27/216 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ ++F ++LG G G V K PSG +A K + +N+++ ++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPA---IRNQIIRELQVL 68
Query: 401 HR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
H N ++GF +GE I + E + SLD L E ++ + +I+G ++
Sbjct: 69 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPE-------EILGKVS 120
Query: 456 ----RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
RG+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N V
Sbjct: 121 IAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFV 174
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
GT YMAPE +SV+SD++S G+ ++E+ G+
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 116 XQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 173 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSRS--SGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 60
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 108
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 109 XQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 165
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 166 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 116 XQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 173 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVY--------KGVLPSGQEIAVKRLSRSSGQGG-QEFKNE 392
E + + LGEG FG+V K +AVK L + + + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 393 VVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----------YEPEK-- 438
+ ++ + +H+N++ LLG C + ++ + +L +L Y+ +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 439 QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAK-I 497
++Q+ + +ARG+ YL + + IHRDL A N+L+ KI+DFG+A+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 498 FGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+D + TN + +MAPE ++ +SDV+SFGVL+ EI T
Sbjct: 208 NNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 331 LESLQFDFETIEVATNNFSTDNK-LGEGGFGEVYKGVLPSGQEI----AVKRLSRSSGQG 385
L LQ+ + + ++ D + LG GGFGEV+ + + ++ + + +G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYE-PEKQQQLD 443
Q E ++AK+ R +V L + E + + LV + + Y +Y E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 444 WSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT 503
R I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A QT
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 504 QGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+ T GT G+MAPE + ++ D ++ GV + E+I +
Sbjct: 345 K--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAKLQHRNLVRLLG 409
LG GG EV+ L +++AVK L + F+ E A L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 410 F----CLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G +V E+V +L ++ + + R ++I + + + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIF---GVDQTQGNTNRIVGTYGYMAPEYA 522
IIHRD+K +NI++ A K+ DFG+A+ G TQ T ++GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAVIGTAQYLSPEQA 191
Query: 523 MHGQFSVKSDVYSFGVLVLEIITGK 547
+SDVYS G ++ E++TG+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCL-EGEEKILVY-----EFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F GE+K +VY ++VP + +Q L + + R + Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 239
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 331 LESLQFDFETIEVATNNFSTDNK-LGEGGFGEVYKGVLPSGQEI----AVKRLSRSSGQG 385
L LQ+ + + ++ D + LG GGFGEV+ + + ++ + + +G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYE-PEKQQQLD 443
Q E ++AK+ R +V L + E + + LV + + Y +Y E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 444 WSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT 503
R I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A QT
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 504 QGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+ T GT G+MAPE + ++ D ++ GV + E+I +
Sbjct: 345 K--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 331 LESLQFDFETIEVATNNFSTDNK-LGEGGFGEVYKGVLPSGQEI----AVKRLSRSSGQG 385
L LQ+ + + ++ D + LG GGFGEV+ + + ++ + + +G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYE-PEKQQQLD 443
Q E ++AK+ R +V L + E + + LV + + Y +Y E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 444 WSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT 503
R I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A QT
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 504 QGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+ T GT G+MAPE + ++ D ++ GV + E+I +
Sbjct: 345 K--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 208 TKSIDIWSVGCILAEMLSNR 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI D+G+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 331 LESLQFDFETIEVATNNFSTDNK-LGEGGFGEVYKGVLPSGQEI----AVKRLSRSSGQG 385
L LQ+ + + ++ D + LG GGFGEV+ + + ++ + + +G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYE-PEKQQQLD 443
Q E ++AK+ R +V L + E + + LV + + Y +Y E
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 444 WSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT 503
R I G+ +LH+ + II+RDLK N+LLD + N +ISD G+A QT
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 504 QGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+ T GT G+MAPE + ++ D ++ GV + E+I +
Sbjct: 345 K--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 345 TNNFSTDNKLGEGGFGEVY--KGVLPSGQEIAVKRLSRSS---GQGGQEFKNEVVLVAKL 399
++ + KLG G +GEV K L +G E A+K + +SS +EV ++ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H N+++L F + LV E L + +K ++D + I+ + G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTT 118
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
YLH+ + I+HRDLK N+LL+++ KI DFG++ F V G +GT Y
Sbjct: 119 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERLGTAYY 172
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+APE + ++ K DV+S GV++ ++ G
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 150
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 210
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 211 TKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 151
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 152 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 211
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 212 TKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 142
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 143 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 202
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 203 TKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 143
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 203
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 204 TKSIDIWSVGCILAEMLSNR 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVL 77
Query: 401 HR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAVI 133
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 134 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRS 187
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAKLQHRNLVRLL- 408
LG GG EV+ L +++AVK L + F+ E A L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 409 ---GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G +V E+V +L ++ + + R ++I + + + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIF---GVDQTQGNTNRIVGTYGYMAPEYA 522
IIHRD+K +NI++ A K+ DFG+A+ G TQ T ++GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAVIGTAQYLSPEQA 191
Query: 523 MHGQFSVKSDVYSFGVLVLEIITGK 547
+SDVYS G ++ E++TG+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ 400
E+ ++F ++LG G G V+K PSG +A K + +N+++ ++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVL 85
Query: 401 HR-NLVRLLGFC----LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
H N ++GF +GE I + E + SLD L +K ++ K+ +
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL---KKAGRIPEQILGKVSIAVI 141
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+G+ YL E + +I+HRD+K SNIL+++ K+ DFG++ +D N VGT
Sbjct: 142 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSM---ANSFVGTRS 195
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGY 209
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 150
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGY 210
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 211 TKSIDIWSVGCILAEMLSNR 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 105
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 153
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 154 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 211 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LS+ S + E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DFG+A+
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 186
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 13/237 (5%)
Query: 315 KYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI- 373
K +A P + D L+ + D + LG+GGF + Y+ +E+
Sbjct: 12 KPSAKPSAHVDPKSAPLKEIP-DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVF 70
Query: 374 AVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD 430
A K + +S ++ E+ + L + ++V GF + + +V E +SL
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL- 129
Query: 431 YFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKIS 490
++ + RY + I +G+ YLH + R+IHRDLK N+ L+ +M+ KI
Sbjct: 130 -LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 491 DFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
DFG+A D + + GT Y+APE S + D++S G ++ ++ GK
Sbjct: 185 DFGLATKIEFDGERKKX--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 143
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 203
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 204 TKSIDIWSVGCILAEMLSNR 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 328 ITTLESLQFD--FETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRS-SG 383
I T E+L F E EV ++ +LG G +G V K +PSGQ AVKR+ + +
Sbjct: 14 IPTTENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS 73
Query: 384 QGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP-EKQQQL 442
Q + ++ + + L E + + + + SLD F + +K Q +
Sbjct: 74 QEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTI 133
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
KI I + + +LH S+L +IHRD+K SN+L++A K DFG++ + VD
Sbjct: 134 PEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISG-YLVDD 190
Query: 503 TQGNTNRIVGTYGYMAPEYA----MHGQFSVKSDVYSFGVLVLEI 543
+ + G Y APE +SVKSD++S G+ +E+
Sbjct: 191 VAKDID--AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSRS--SGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 61
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 109
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 166
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 167 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 61
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 109
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 110 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 166
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 167 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSRS--SGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 60
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 108
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 109 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 166 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 354 LGEGGFGEVYKGVLPS----GQ----EIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
LG+G F +++KGV GQ E+ +K L ++ + F +++KL H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C+ G+E ILV EFV SLD +L + + + W + ++ +A + +L E++
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEENT 133
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYMAPEYAM 523
+IH ++ A NILL E + K + K+ G+ T + + ++ PE
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 524 HGQ-FSVKSDVYSFGVLVLEIITG 546
+ + ++ +D +SFG + EI +G
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 9 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 66
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 114
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 115 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 171
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 172 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 148 LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 208 TKSIDIWSVGCILAEMLSNR 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 10 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 67
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 68 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 115
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 173 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 173 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 68
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 116
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 174 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 13/237 (5%)
Query: 315 KYNAVPEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI- 373
K +A P + D L+ + D + LG+GGF + Y+ +E+
Sbjct: 12 KPSAKPSAHVDPKSAPLKEIP-DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVF 70
Query: 374 AVKRLSRS---SGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD 430
A K + +S ++ E+ + L + ++V GF + + +V E +SL
Sbjct: 71 AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL- 129
Query: 431 YFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKIS 490
++ + RY + I +G+ YLH + R+IHRDLK N+ L+ +M+ KI
Sbjct: 130 -LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 491 DFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
DFG+A D + + GT Y+APE S + D++S G ++ ++ GK
Sbjct: 185 DFGLATKIEFDGERKKD--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 116 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 173 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKLQHR 402
+ + +G G +G V + SG+++A+K+LSR S + E++L+ +QH
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSL----DYFLYEPEKQQQLDWSRRYKIIG------ 452
N++ LL F P SL D++L P Q L KI+G
Sbjct: 84 NVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQ-----KIMGLKFSEE 126
Query: 453 -------GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQG 505
+ +G+ Y+H ++HRDLK N+ ++ + KI DFG+A+
Sbjct: 127 KIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADA 178
Query: 506 NTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
V T Y APE + ++ D++S G ++ E++TGK
Sbjct: 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 111
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 172 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 225
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 273
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSS----GQGGQEFKNEVVLVAKLQHRNLVRLLG 409
LG+GGF + Y+ +E+ ++ S ++ E+ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
F + + +V E +SL ++ + RY + I +G+ YLH + R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 147
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
IHRDLK N+ L+ +M+ KI DFG+A D + + GT Y+APE S
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCGTPNYIAPEVLCKKGHSF 205
Query: 530 KSDVYSFGVLVLEIITGK 547
+ D++S G ++ ++ GK
Sbjct: 206 EVDIWSLGCILYTLLVGK 223
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 354 LGEGGFGEVYKGVLPS----GQ----EIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
LG+G F +++KGV GQ E+ +K L ++ + F +++KL H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
G C G+E ILV EFV SLD +L + + + W + ++ +A + +L E++
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEENT 133
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYMAPEYAM 523
+IH ++ A NILL E + K + K+ G+ T + + ++ PE
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 524 HGQ-FSVKSDVYSFGVLVLEIITG 546
+ + ++ +D +SFG + EI +G
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EV + F+ + +G G G V Y VL + +A+K+LSR +
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 68
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 116
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 174 ARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI DF +A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 51 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 105
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 166 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 219
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 267
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAKLQ 400
++ + LG GG EV+ L +++AVK L + F+ E A L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 401 HRNLVRLL----GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
H +V + G +V E+V +L ++ + + R ++I +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 144
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF---GVDQTQGNTNRIVGT 513
+ + H++ IIHRD+K +NI++ A K+ DFG+A+ G TQ T ++GT
Sbjct: 145 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAVIGT 199
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
Y++PE A +SDVYS G ++ E++TG+
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 28 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 82
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 143 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 196
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 244
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 28/240 (11%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFK----NEVVLVA 397
+ +NF LG+G FG+V V +G AVK L + + + + +L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 398 KLQHRNLVRLLGFCLEGEEKIL-VYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
H L +L C + +++ V EFV L ++ +K ++ D +R I
Sbjct: 80 ARNHPFLTQLFC-CFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIIS 135
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV----- 511
+++LH+ II+RDLK N+LLD E + K++DFGM K +G N +
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK-------EGICNGVTTATFC 185
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
GT Y+APE + D ++ GVL+ E++ G + ++ + DL + + V+
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG---HAPFEAENEDDLFEAILNDEVV 242
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKLQHR 402
+ + +G G +G V + SG+++A+K+LSR S + E++L+ +QH
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSL----DYFLYEPEKQQQLDWSRRYKIIG------ 452
N++ LL F P SL D++L P Q L KI+G
Sbjct: 102 NVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQ-----KIMGMEFSEE 144
Query: 453 -------GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQG 505
+ +G+ Y+H ++HRDLK N+ ++ + KI DFG+A+
Sbjct: 145 KIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADA 196
Query: 506 NTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
V T Y APE + ++ D++S G ++ E++TGK
Sbjct: 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 31 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 85
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 146 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 199
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 247
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 181
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 111
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 172 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 225
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 128
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 181
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 89
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 150 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 203
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 251
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 239
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 42 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 96
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 157 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 210
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 258
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 24 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 78
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 139 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 192
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 240
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 172 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y + + +A++++S Q Q E+ ++ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ ++ LY+ K Q L + I RG+ Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 191
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 61 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 115
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 176 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 229
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 277
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 59 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 113
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 174 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 227
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL ++ LD + ++
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKFSLDLASLILYAYQLST 122
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
+ YL R +HRD+ A N+L+ A K+ DFG+++ + D T ++ +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 178
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEII 544
MAPE +F+ SDV+ FGV + EI+
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 89
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 150 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 203
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 251
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 36 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 90
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 151 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 204
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 252
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSS---GQGGQEFKNEVVLV 396
I + N+FS +G GGFGEVY +G+ A+K L + QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 397 AKLQHRN--LVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
+ + + + + + +K+ + + + L Y L + + D R Y
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-MRFY--AAE 300
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I G+ ++H +R +++RDLK +NILLD + +ISD G+A D ++ + VGT
Sbjct: 301 IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGT 353
Query: 514 YGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+GYMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 393
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 102 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 156
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 217 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 270
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 318
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSS---GQGGQEFKNEVVLV 396
I + N+FS +G GGFGEVY +G+ A+K L + QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 397 AKLQHRN--LVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
+ + + + + + +K+ + + + L Y L + + D R Y
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-MRFY--AAE 300
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I G+ ++H +R +++RDLK +NILLD + +ISD G+A D ++ + VGT
Sbjct: 301 IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGT 353
Query: 514 YGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+GYMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 393
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+LG+G F V + V + +GQE A K ++ + S + Q+ + E + L+H N+VRL
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
E L+++ V L + E + D S I I +L+ H+ +
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHCHQ---MG 141
Query: 469 IIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
++HRDLK N+LL +++ K++DFG+A V+ Q GT GY++PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
+ D+++ GV++ ++ G
Sbjct: 200 PYGKPVDLWACGVILYILLVG 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG 409
+GEG +G V Y V + +A+K++S Q Q E+ ++ + +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
+ + ++ + LY+ K Q L + I RG+ Y+H + +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPEYAMHGQFS 528
+HRDLK SN+LL+ + KI DFG+A++ D G V T Y APE ++ +
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 529 VKS-DVYSFGVLVLEIITGK 547
KS D++S G ++ E+++ +
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL ++ LD + ++
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKFSLDLASLILYAYQLST 122
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
+ YL R +HRD+ A N+L+ + K+ DFG+++ + D T ++ +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKW 178
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEII 544
MAPE +F+ SDV+ FGV + EI+
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 11 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 68
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 69 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 116
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 117 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 173
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+A+ G T V T Y APE + + D++S G ++ E+I G
Sbjct: 174 LARTAG---TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 27 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 81
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 142 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRY-YRAP 195
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 243
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLL 408
K+GEG +G V+K EI A+KR+ G E+ L+ +L+H+N+VRL
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
++ LV+EF YF LD + + +G+ + H +
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--- 121
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQ-F 527
++HRDLK N+L++ K++DFG+A+ FG+ + + +V T Y P+ + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLY 179
Query: 528 SVKSDVYSFGVLVLEIITGKK 548
S D++S G + E+ +
Sbjct: 180 STSIDMWSAGCIFAELANAAR 200
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 350 TDNK-LGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVR 406
TD K +G G FG VY+ L SG+ +A+K++ + + FKN E+ ++ KL H N+VR
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVR 77
Query: 407 LLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
L F EK LV ++VP + +Q L + + R + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
+H I HRD+K N+LLD + K+ DFG AK + + + N + I Y Y AP
Sbjct: 138 IHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRY-YRAP 191
Query: 520 EYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
E ++ DV+S G ++ E++ G+ + D D L V I +V+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ---PIFPGDSGVDQL--VEIIKVL 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 24/235 (10%)
Query: 346 NNFS--TDNKLGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEV---VLVAKL 399
NNF T +LG G F V + + S GQE A K L + + GQ+ + E+ + V +L
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKR--RRGQDCRAEILHEIAVLEL 84
Query: 400 QHR--NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARG 457
++ L E IL+ E+ + + L PE + + + ++I I G
Sbjct: 85 AKSCPRVINLHEVYENTSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIKQILEG 143
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNTNRIVGT 513
+ YLH+++ I+H DLK NILL + + P KI DFGM++ G I+GT
Sbjct: 144 VYYLHQNN---IVHLDLKPQNILLSS-IYPLGDIKIVDFGMSRKIG---HACELREIMGT 196
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSIN 568
Y+APE + + +D+++ G++ ++T S F D L+ +N
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLT--HTSPFVGEDNQETYLNISQVN 249
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 41/214 (19%)
Query: 353 KLGEGGFGEVYKGVL----PSGQEIAVKRL--SRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
K+GEG FG K +L G++ +K + SR S + +E + EV ++A ++H N+V+
Sbjct: 31 KIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ 87
Query: 407 -------------LLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
++ +C G+ L K + + ++ Q LDW +
Sbjct: 88 YRESFEENGSLYIVMDYCEGGD---LFKRINAQKGVLF-----QEDQILDWFVQ------ 133
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I + ++H+ +I+HRD+K+ NI L + ++ DFG+A++ ++ T +GT
Sbjct: 134 ICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGT 188
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
Y++PE + ++ KSD+++ G ++ E+ T K
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 36/210 (17%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
LG+G FG+V+ VK++S S + Q + +V+ A L+ R+ VR +
Sbjct: 32 LGQGSFGKVF----------LVKKISGSDAR--QLYAMKVLKKATLKVRDRVRT-----K 74
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQL--DWSRRYKIIGGIARGILYLHEDSR----- 466
E ILV P ++ ++ E + L D+ R + +++ +++ ED +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 467 ----------LRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
L II+RDLK NILLD E + K++DFG++K +D + GT Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDH-EKKAYSFCGTVEY 192
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
MAPE + +D +SFGVL+ E++TG
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 326 NDITTLESLQFDFE-TIEVATNNFSTDNKLGEGGFGEVYK----GVLPS--GQEIAVKRL 378
N+ ++ Q ++ E N S LG G FG+V + G++ S +AVK L
Sbjct: 2 NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 61
Query: 379 SRSSGQGGQE-FKNEVVLVAKL-QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP 436
S+ +E +E+ +++ L H N+V LLG C G +++ E+ L FL
Sbjct: 62 KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR- 120
Query: 437 EKQQQLDWSRRYKIIGG-----------------IARGILYLHEDSRLRIIHRDLKASNI 479
K+ S+ I +A+G+ +L + IHRDL A NI
Sbjct: 121 -KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNI 176
Query: 480 LLDAEMNPKISDFGMAKIFGVDQ---TQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSF 536
LL KI DFG+A+ D +GN V +MAPE + ++ +SDV+S+
Sbjct: 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSY 233
Query: 537 GVLVLEIIT 545
G+ + E+ +
Sbjct: 234 GIFLWELFS 242
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSS---GQGGQEFKNEVVLV 396
I + N+FS +G GGFGEVY +G+ A+K L + QG NE +++
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 397 AKLQHRN--LVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
+ + + + + + +K+ + + + L Y L + + D R Y
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-MRFY--AAE 299
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I G+ ++H +R +++RDLK +NILLD + +ISD G+A D ++ + VGT
Sbjct: 300 IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGT 352
Query: 514 YGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+GYMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 392
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 43/232 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F ++EVA + F+ + +G G G V + VL G +AVK+LSR +
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHA 67
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 68 KRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 115
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
+LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 116 CQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
A+ T V T Y APE + ++ D++S G ++ E++ G
Sbjct: 173 ARTAC---TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL ++ LD + ++
Sbjct: 94 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV--RKYSLDLASLILYAYQLST 150
Query: 457 GILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
+ YL R +HRD+ A N+L+ + K+ DFG+++ + D T ++ +
Sbjct: 151 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 206
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEII 544
MAPE +F+ SDV+ FGV + EI+
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL R+Y + +A
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ----------VRKYSL--DLAS 112
Query: 457 GILYLHEDSRL-------RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
ILY ++ S R +HRD+ A N+L+ + K+ DFG+++ + D T ++
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 171
Query: 510 IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+MAPE +F+ SDV+ FGV + EI+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 341 IEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSS---GQGGQEFKNEVVLV 396
I + N+FS +G GGFGEVY +G+ A+K L + QG NE +++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 397 AKLQHRN--LVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
+ + + + + + +K+ + + + L Y L + + D R Y
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-MRFY--AAE 300
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I G+ ++H +R +++RDLK +NILLD + +ISD G+A D ++ + VGT
Sbjct: 301 IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGT 353
Query: 514 YGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGKKNSSFYQ 554
+GYMAPE G + +D +S G ++ +++ G +S F Q
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG--HSPFRQ 393
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L P KI DFG+A GN I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 38/216 (17%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHRNLVRLLG 409
K+G+G FGEV+K +GQ++A+K++ + + G E+ ++ L+H N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 410 FCLEGEEKI--------LVYEF--------VPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
C LV++F + N + + L E ++ Q+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----------- 133
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ-TQGN--TNRI 510
+ G+ Y+H R +I+HRD+KA+N+L+ + K++DFG+A+ F + + +Q N NR+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 511 VGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 545
V T Y PE + + D++ G ++ E+ T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAK 398
V ++ + LG G FG+V G +G ++AVK L+R + + K E+ +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGI 458
+H ++++L + +V E+V L ++ + + ++++ R ++ I +
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAV 124
Query: 459 LYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRI-VGTYGYM 517
Y H R ++HRDLK N+LLDA MN KI+DFG++ + + G R G+ Y
Sbjct: 125 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRTSCGSPNYA 177
Query: 518 APEYAMHGQFSV--KSDVYSFGVLVLEIITG 546
APE + G+ + D++S GV++ ++ G
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL R+Y + +A
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ----------VRKYSL--DLAS 112
Query: 457 GILYLHEDSRL-------RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
ILY ++ S R +HRD+ A N+L+ + K+ DFG+++ + D T ++
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 171
Query: 510 IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+MAPE +F+ SDV+ FGV + EI+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL R+Y + +A
Sbjct: 63 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ----------VRKYSL--DLAS 109
Query: 457 GILYLHEDSRL-------RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
ILY ++ S R +HRD+ A N+L+ + K+ DFG+++ + D T ++
Sbjct: 110 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 168
Query: 510 IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+MAPE +F+ SDV+ FGV + EI+
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 354 LGEGGFGEVYKGVL-PSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
+G G +G V V +G ++A+K+L R S + E+ L+ ++H N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 411 CLEGEEKILVYEFVPNKSLD----YFLYEP---------EKQQQLDWSRRYKIIGGIARG 457
F P+++LD ++L P K ++L R ++ + +G
Sbjct: 93 ------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYM 517
+ Y+H IIHRDLK N+ ++ + KI DFG+A+ Q V T Y
Sbjct: 141 LRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYR 192
Query: 518 APEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
APE ++ +++ D++S G ++ E+ITGK
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 36/210 (17%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
LG+G FG+V+ VK++S S + Q + +V+ A L+ R+ VR +
Sbjct: 33 LGQGSFGKVF----------LVKKISGSDAR--QLYAMKVLKKATLKVRDRVRT-----K 75
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQL--DWSRRYKIIGGIARGILYLHEDSR----- 466
E ILV P ++ ++ E + L D+ R + +++ +++ ED +
Sbjct: 76 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 467 ----------LRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
L II+RDLK NILLD E + K++DFG++K +D + GT Y
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEK-KAYSFCGTVEY 193
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
MAPE + +D +SFGVL+ E++TG
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI D G+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL R+Y + +A
Sbjct: 71 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ----------VRKYSL--DLAS 117
Query: 457 GILYLHEDSRL-------RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
ILY ++ S R +HRD+ A N+L+ + K+ DFG+++ + D T ++
Sbjct: 118 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 176
Query: 510 IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+MAPE +F+ SDV+ FGV + EI+
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI FG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 36/210 (17%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
LG+G FG+V+ VK++S S + Q + +V+ A L+ R+ VR +
Sbjct: 32 LGQGSFGKVF----------LVKKISGSDAR--QLYAMKVLKKATLKVRDRVRT-----K 74
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQL--DWSRRYKIIGGIARGILYLHEDSR----- 466
E ILV P ++ ++ E + L D+ R + +++ +++ ED +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 467 ----------LRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
L II+RDLK NILLD E + K++DFG++K +D + GT Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEK-KAYSFCGTVEY 192
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
MAPE + +D +SFGVL+ E++TG
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL R+Y + +A
Sbjct: 68 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ----------VRKYSL--DLAS 114
Query: 457 GILYLHEDSRL-------RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
ILY ++ S R +HRD+ A N+L+ + K+ DFG+++ + D T ++
Sbjct: 115 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 173
Query: 510 IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+MAPE +F+ SDV+ FGV + EI+
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 43/234 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 348 FSTDNKLGEGGFGEVYK-----GVLPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQ 400
+ T +LG G F V K L + KR ++SS +G ++ + EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 401 HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
H N++ L + IL+ E V L FL E E L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYY 129
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPK----ISDFGMAKIFGVDQTQGNT-NRIVGTYG 515
LH L+I H DLK NI+L PK I DFG+A GN I GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPE 182
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVS 566
++APE + +++D++S GV+ +++G +S + D + L+ VS
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVS 230
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 38/216 (17%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHRNLVRLLG 409
K+G+G FGEV+K +GQ++A+K++ + + G E+ ++ L+H N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 410 FCLEGEEKI--------LVYEF--------VPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
C LV++F + N + + L E ++ Q+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----------- 133
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ-TQGN--TNRI 510
+ G+ Y+H R +I+HRD+KA+N+L+ + K++DFG+A+ F + + +Q N NR+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 511 VGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 545
V T Y PE + + D++ G ++ E+ T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVKRLSRSSGQGGQE-FKNEVVLV 396
E+ +GEG FG+V++G+ S + +A+K + +E F E + +
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIAR 456
+ H ++V+L+G E I++ E L FL R+Y + +A
Sbjct: 69 RQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ----------VRKYSL--DLAS 115
Query: 457 GILYLHEDSRL-------RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
ILY ++ S R +HRD+ A N+L+ + K+ DFG+++ + D T ++
Sbjct: 116 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 174
Query: 510 IVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+MAPE +F+ SDV+ FGV + EI+
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI D G+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQ---EFKNEVVLVAK 398
V ++ + LG G FG+V G +G ++AVK L+R + + K E+ +
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 399 LQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGI 458
+H ++++L + +V E+V L ++ + + ++++ R ++ I +
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAV 124
Query: 459 LYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
Y H R ++HRDLK N+LLDA MN KI+DFG++ + + ++ G+ Y A
Sbjct: 125 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAA 178
Query: 519 PEYAMHGQFSV--KSDVYSFGVLVLEIITG 546
PE + G+ + D++S GV++ ++ G
Sbjct: 179 PE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 43/234 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 3 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 60
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 61 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 108
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 165
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 166 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVK-----RLSRSS-GQGGQEFKNEVV 394
E +++ +LG G F V K +G+E A K RLS S G +E + EV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
++ +++H N++ L + +L+ E V L FL E E L + + I
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQI 124
Query: 455 ARGILYLHEDSRLRIIHRDLKASNI-LLDAEM-NPKIS--DFGMAKIFGVDQTQGNTNRI 510
G+ YLH RI H DLK NI LLD + NP+I DFG+A N I
Sbjct: 125 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---I 178
Query: 511 VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
GT ++APE + +++D++S GV+ +++G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 38/216 (17%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHRNLVRLLG 409
K+G+G FGEV+K +GQ++A+K++ + + G E+ ++ L+H N+V L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 410 FCLEGEEKI--------LVYEF--------VPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
C LV++F + N + + L E ++ Q+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----------- 132
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ-TQGN--TNRI 510
+ G+ Y+H R +I+HRD+KA+N+L+ + K++DFG+A+ F + + +Q N NR+
Sbjct: 133 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 511 VGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 545
V T Y PE + + D++ G ++ E+ T
Sbjct: 190 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 38/216 (17%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFK--NEVVLVAKLQHRNLVRLLG 409
K+G+G FGEV+K +GQ++A+K++ + + G E+ ++ L+H N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 410 FCLEGEEKI--------LVYEF--------VPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
C LV++F + N + + L E ++ Q+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM----------- 133
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ-TQGN--TNRI 510
+ G+ Y+H R +I+HRD+KA+N+L+ + K++DFG+A+ F + + +Q N NR+
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 511 VGTYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEIIT 545
V T Y PE + + D++ G ++ E+ T
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 43/234 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 14 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 71
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 72 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 119
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 120 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 176
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 177 LARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSR--SSGQGGQEFKNEVVL 395
+TI + + +G G +G V +G +AVK+LSR S + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQL 442
+ ++H N++ LL F P +SL+ F L K Q+L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+I I RG+ Y+H IIHRDLK SN+ ++ + KI D G+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-----H 174
Query: 503 TQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
T V T Y APE ++ ++ D++S G ++ E++TG+
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 25/242 (10%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI----AVKRLSRSS----GQGGQEFKNEV 393
+V NF LG G +G+V+ SG + A+K L +++ + + + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 394 VLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKI-I 451
++ ++ + L + + E K+ L+ +++ L L + E+ + +I +
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE----HEVQIYV 165
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
G I + +LH +L II+RD+K NILLD+ + ++DFG++K F D+T+ +
Sbjct: 166 GEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FC 221
Query: 512 GTYGYMAPEYAMHGQ--FSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINR 569
GT YMAP+ G D +S GVL+ E++TG +S + DG + S I+R
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG---ASPFTVDGEKN--SQAEISR 276
Query: 570 VI 571
I
Sbjct: 277 RI 278
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVK-----RLSRSS-GQGGQEFKNEVVL 395
+ +++ +LG G F V K +G+E A K RLS S G +E + EV +
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H N++ L + +L+ E V L FL E E L + + I
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQIL 118
Query: 456 RGILYLHEDSRLRIIHRDLKASNI-LLDAEM-NPKIS--DFGMAKIFGVDQTQGNTNRIV 511
G+ YLH RI H DLK NI LLD + NP+I DFG+A N I
Sbjct: 119 DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IF 172
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
GT ++APE + +++D++S GV+ +++G
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 16/229 (6%)
Query: 321 EVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVK 376
E+ + D T+ S + D+E + +GEG FG+V++G+ S + +A+K
Sbjct: 369 EIIDEEDTYTMPSTR-DYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIK 424
Query: 377 RLSRSSGQGGQE-FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE 435
+ +E F E + + + H ++V+L+G E I++ E L FL
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV 483
Query: 436 PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
++ LD + ++ + YL R +HRD+ A N+L+ A K+ DFG++
Sbjct: 484 --RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLS 538
Query: 496 KIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+ + D T ++ +MAPE +F+ SDV+ FGV + EI+
Sbjct: 539 R-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 43/234 (18%)
Query: 337 DFETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQG 385
+F ++E+ + F+ + +G G G V Y +L + +A+K+LSR +
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK-- 438
+ E+VL+ + H+N++ LL F P KSL+ Y + E
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 439 -----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
Q +LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+A+ G T V T Y APE + + D++S G ++ E++ K
Sbjct: 172 LARTAG---TSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
T+ + +G+G F V + V L +G E A K ++ + S + Q+ + E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I +L+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHC 119
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H+ + ++HRDLK N+LL ++ K++DFG+A V Q GT GY++
Sbjct: 120 HQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLS 174
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + D+++ GV++ ++ G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGGQEFKNEVV---LVAK 398
V +F+ LG+G FG+V +E+ A+K L + + + +V ++A
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 399 LQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII---GGI 454
L + L C + +++ V E+V L Y + QQ+ + + + I
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI------QQVGKFKEPQAVFYAAEI 129
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+ G+ +LH+ II+RDLK N++LD+E + KI+DFGM K +D T GT
Sbjct: 130 SIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGTP 184
Query: 515 GYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
Y+APE + + D +++GVL+ E++ G+
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 331 LESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFK 390
L+ FE +E+ +G+G FG+VY G I + + R + + FK
Sbjct: 25 LQEWDIPFEQLEIG-------ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFK 77
Query: 391 NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKI 450
EV+ + +H N+V +G C+ ++ ++L + + + LD ++ +I
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL--YSVVRDAKIVLDVNKTRQI 135
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPK--ISDFGMAKIFGVDQTQGNTN 508
I +G+ YLH I+H+DLK+ N+ D N K I+DFG+ I GV Q +
Sbjct: 136 AQEIVKGMGYLHAKG---ILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRRED 189
Query: 509 RIV---GTYGYMAPEYAMHGQ---------FSVKSDVYSFGVLVLEI 543
++ G ++APE FS SDV++ G + E+
Sbjct: 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 352 NKLGEGGFGEVYKGVLP-SGQEIAVK--RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+KLGEG + VYKG + +A+K RL G + EV L+ L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 66
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
+ LV+E++ +K L +L + + + + + + RG+ Y H R +
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCH---RQK 120
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG-QF 527
++HRDLK N+L++ K++DFG+A+ + T+ N +V T Y P+ + +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTYDNEVV-TLWYRPPDILLGSTDY 178
Query: 528 SVKSDVYSFGVLVLEIITGK 547
S + D++ G + E+ TG+
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
T+ + +LG+G F V + + +P+GQE A K ++ + S + Q+ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESVNHC 119
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H + I+HRDLK N+LL ++ K++DFG+A V Q GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLS 174
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + D+++ GV++ ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
T+ + +LG+G F V + + +P+GQE A K ++ + S + Q+ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESVNHC 119
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H + I+HRDLK N+LL ++ K++DFG+A V Q GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLS 174
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + D+++ GV++ ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 352 NKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
++G+G +GEV+ G G+++AVK + ++ + + E+ ++H N++ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVK-VFFTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 412 LEGE----EKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED-- 464
++G + L+ ++ N SL DY K LD K+ G+ +LH +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 465 ---SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNT--NRIVGTYGYMAP 519
+ I HRDLK+ NIL+ I+D G+A F D + + N VGT YM P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 520 EY------AMHGQFSVKSDVYSFGVLVLEI 543
E H Q + +D+YSFG+++ E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 353 KLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGG--QEFKNEVVLVAKLQHRNLVRLLG 409
K+GEG +G V+K EI A+KR+ G E+ L+ +L+H+N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
++ LV+EF YF LD + + +G+ + H + +
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQ-FS 528
+HRDLK N+L++ K+++FG+A+ FG+ + + +V T Y P+ + +S
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 529 VKSDVYSFGVLVLEI 543
D++S G + E+
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGV-LPSGQEIA--VKRLSRSSGQGGQEFKNEVVLVAKLQH 401
T + +LG+G F V + V + +GQE A + + S + Q+ + E + L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E L+++ V L + E + D S I I +L+
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHC 126
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H+ + ++HR+LK N+LL +++ K++DFG+A V+ Q GT GY++
Sbjct: 127 HQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLS 181
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + D+++ GV++ ++ G
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 354 LGEGGFGEVYKGVLP-SGQEIAVKRLS---RSSGQGG--QEFKNEVVLVAKLQHRNLVRL 407
LGEG F VYK + Q +A+K++ RS + G + E+ L+ +L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
L LV++F+ L+ + + + Y ++ +G+ YLH+
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW-- 132
Query: 468 RIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQ- 526
I+HRDLK +N+LLD K++DFG+AK FG + +++V T Y APE +
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVV-TRWYRAPELLFGARM 189
Query: 527 FSVKSDVYSFGVLVLEII 544
+ V D+++ G ++ E++
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 43/232 (18%)
Query: 338 FETIEVATNNFSTDNK------LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGG 386
F +++VA + F+ + +G G G V + VL G +AVK+LSR +
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHA 65
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLD-----YFLYEPEK--- 438
+ E+VL+ + H+N++ LL F P K+L+ Y + E
Sbjct: 66 KRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 113
Query: 439 ----QQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGM 494
+LD R ++ + GI +LH IIHRDLK SNI++ ++ KI DFG+
Sbjct: 114 CQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 170
Query: 495 AKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
A+ T V T Y APE + + D++S G ++ E++ G
Sbjct: 171 ARTAS---TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLV---A 397
+ N+ ++G G G+V+K +G IAVK++ RS G + +N+ +L+
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS----GNKEENKRILMDLDV 76
Query: 398 KLQHRN---LVRLLGFCLEGEEKILVYEFVPN--KSLDYFLYEPEKQQQLDWSRRYKIIG 452
L+ + +V+ G + + + E + + L + P ++ L K+
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTV 131
Query: 453 GIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVG 512
I + + YL E + +IHRD+K SNILLD K+ DFG++ D+ + +R G
Sbjct: 132 AIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAG 186
Query: 513 TYGYMAPEY-----AMHGQFSVKSDVYSFGVLVLEIITGK 547
YMAPE + +++DV+S G+ ++E+ TG+
Sbjct: 187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 16/229 (6%)
Query: 321 EVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQE----IAVK 376
E+ + D T+ S + D+E + +GEG FG+V++G+ S + +A+K
Sbjct: 369 EIIDEEDTYTMPSTR-DYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIK 424
Query: 377 RLSRSSGQGGQE-FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE 435
+ +E F E + + + H ++V+L+G E I++ E L FL
Sbjct: 425 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV 483
Query: 436 PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
++ LD + ++ + YL R +HRD+ A N+L+ + K+ DFG++
Sbjct: 484 --RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Query: 496 KIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+ + D T ++ +MAPE +F+ SDV+ FGV + EI+
Sbjct: 539 R-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 335 QFDFETIEVATNNFSTDNK-------LGEGGFGEVYKG------VLPSGQEIAVKRLSRS 381
Q D E +E S D + +G G F VYKG V + E+ ++L++S
Sbjct: 8 QDDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS 67
Query: 382 SGQGGQEFKNEVVLVAKLQHRNLVRL---LGFCLEGEEKI-LVYEFVPNKSLDYFL--YE 435
Q FK E + LQH N+VR ++G++ I LV E + +L +L ++
Sbjct: 68 ERQ---RFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK 124
Query: 436 PEKQQQL-DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFG 493
K + L W R+ I +G+ +LH + IIHRDLK NI + KI D G
Sbjct: 125 VXKIKVLRSWCRQ------ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLG 177
Query: 494 MAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
+A + + ++GT + APE ++ DVY+FG LE T +
Sbjct: 178 LATL----KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 344 ATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRS---SGQGGQEFKNEVVLVAKL 399
+ +F LG G FG V+ +G+ A+K L + + + +E ++++ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 400 QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL 459
H ++R+ G + ++ ++ +++ L L K Q+ + +
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPNPVAKFYAAEVCLALE 120
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH II+RDLK NILLD + KI+DFG AK T + GT Y+AP
Sbjct: 121 YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAP 172
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E ++ D +SFG+L+ E++ G
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 320 PEVNADNDITTLESLQ-FDFETIEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKR 377
PE + + E L+ D+E E + + +LG G FGEV++ +G + AVK+
Sbjct: 46 PETEDNEGVLLTEKLKPVDYEYRE-EVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKK 104
Query: 378 LSRSSGQGGQEFK-NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP 436
+ + F+ E+V A L +V L G EG + E + SL +
Sbjct: 105 VRL------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--- 155
Query: 437 EKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN-PKISDFGMA 495
++ L R +G G+ YLH RI+H D+KA N+LL ++ + + DFG A
Sbjct: 156 KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 212
Query: 496 KIF---GVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
G+ ++ + I GT +MAPE M K D++S ++L ++ G
Sbjct: 213 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 343 VATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVK-----RLSRSS-GQGGQEFKNEVVL 395
+ +++ +LG G F V K +G+E A K RL S G +E + EV +
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 396 VAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
+ +++H N++ L + +L+ E V L FL E E L + + I
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQIL 139
Query: 456 RGILYLHEDSRLRIIHRDLKASNI-LLDAEM-NPKIS--DFGMAKIFGVDQTQGNTNRIV 511
G+ YLH RI H DLK NI LLD + NP+I DFG+A N I
Sbjct: 140 DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IF 193
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
GT ++APE + +++D++S GV+ +++G
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVR 406
F +++LG G VY+ Q+ A+K L ++ + + + E+ ++ +L H N+++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112
Query: 407 LLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSR 466
L E LV E V L + E + D + K I + YLHE+
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK---QILEAVAYLHENG- 168
Query: 467 LRIIHRDLKASNILL-----DAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
I+HRDLK N+L DA + KI+DFG++KI + Q + GT GY APE
Sbjct: 169 --IVHRDLKPENLLYATPAPDAPL--KIADFGLSKIV---EHQVLMKTVCGTPGYCAPEI 221
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDG 557
+ + D++S G++ ++ G FY G
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCG--FEPFYDERG 255
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVLPSG-QEIAVKRLS--RSSGQGGQEFKNEVVLVAKLQH 401
T+++ +LG+G F V + V + QE A K ++ + S + Q+ + E + L+H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYL 461
N+VRL E LV++ V L + E + D S I I + ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIHQILESVNHI 146
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
H+ I+HRDLK N+LL ++ K++DFG+A V Q GT GY++
Sbjct: 147 HQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLS 201
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + D+++ GV++ ++ G
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 37/232 (15%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQE-FKNEVV 394
DFE I+ LG GGFG V++ A+KR+ + + +E EV
Sbjct: 6 DFEPIQC----------LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 55
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDW-------SRR 447
+AKL+H +VR LE + P L + K+ DW R
Sbjct: 56 ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 448 YK-----IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQ 502
+ I IA + +LH ++HRDLK SNI + K+ DFG+ D+
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 503 TQ----------GNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
+ VGT YM+PE +S K D++S G+++ E++
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 331 LESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE 388
L+ + +++ E + AT+ +LG G FGEV++ +G + AVK++ +
Sbjct: 81 LKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRL------EV 130
Query: 389 FK-NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRR 447
F+ E++ A L +V L G EG + E + SL + E Q L R
Sbjct: 131 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE---QGCLPEDRA 187
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAE-MNPKISDFGMAKIF---GVDQT 503
+G G+ YLH SR RI+H D+KA N+LL ++ + + DFG A G+ ++
Sbjct: 188 LYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKS 244
Query: 504 QGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+ I GT +MAPE + K DV+S ++L ++ G
Sbjct: 245 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 348 FSTDNKLGEGGFGEVY-KGVLPSGQEIAVKRLSRSSGQGGQE-FKNEVVLVAKLQHRNLV 405
F KLG G FG+V+ SG E +K +++ Q E + E+ ++ L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 406 RLLGFCLEGEEKILVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
++ + +V E + L+ + + + L +++ + + Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 465 SRLRIIHRDLKASNILLD--AEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
++H+DLK NIL + +P KI DFG+A++F D+ N GT YMAPE
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALYMAPE- 196
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITG 546
+ K D++S GV++ ++TG
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI--AVKRLSRSSGQGGQEF 389
E+L F T ++ +N +G G +GEV K + G I A K++ + + F
Sbjct: 12 ENLYFQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRF 70
Query: 390 KNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYK 449
K E+ ++ L H N++RL + + LV E L + ++ D +R
Sbjct: 71 KQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--- 127
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILL--DAEMNP-KISDFGMAKIFGVDQTQGN 506
I+ + + Y H +L + HRDLK N L D+ +P K+ DFG+A F G
Sbjct: 128 IMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGK 180
Query: 507 TNRI-VGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
R VGT Y++P+ + G + + D +S GV++ ++ G
Sbjct: 181 MMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 320 PEVNADNDITTLESLQ-FDFETIEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKR 377
PE + + E L+ D+E E + + ++G G FGEV++ +G + AVK+
Sbjct: 32 PETEDNEGVLLTEKLKPVDYEYRE-EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK 90
Query: 378 LSRSSGQGGQEFK-NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP 436
+ + F+ E+V A L +V L G EG + E + SL +
Sbjct: 91 VRL------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--- 141
Query: 437 EKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN-PKISDFGMA 495
++ L R +G G+ YLH RI+H D+KA N+LL ++ + + DFG A
Sbjct: 142 KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 198
Query: 496 KIF---GVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
G+ ++ + I GT +MAPE M K D++S ++L ++ G
Sbjct: 199 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 348 FSTDNKLGEGGFGEVYKGVLPSGQEI--AVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
++ +N +G G +GEV K + G I A K++ + + FK E+ ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
RL + + LV E L + ++ D +R I+ + + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCH--- 123
Query: 466 RLRIIHRDLKASNILL--DAEMNP-KISDFGMAKIFGVDQTQGNTNRI-VGTYGYMAPEY 521
+L + HRDLK N L D+ +P K+ DFG+A F G R VGT Y++P+
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGKMMRTKVGTPYYVSPQ- 178
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITG 546
+ G + + D +S GV++ ++ G
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G +GEV++G G+ +AVK S S + + E+ L+H N++ + +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED-----SRLR 468
+ + LY+ + LD +I+ IA G+ +LH + +
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 162
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ---GNTNRIVGTYGYMAPEYAMHG 525
I HRDLK+ NIL+ I+D G+A + Q GN R VGT YMAPE +
Sbjct: 163 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPE-VLDE 220
Query: 526 QFSV-------KSDVYSFGVLVLEI 543
V + D+++FG+++ E+
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 320 PEVNADNDITTLESLQ-FDFETIEVATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKR 377
PE + + E L+ D+E E + + ++G G FGEV++ +G + AVK+
Sbjct: 48 PETEDNEGVLLTEKLKPVDYEYRE-EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK 106
Query: 378 LSRSSGQGGQEFK-NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEP 436
+ + F+ E+V A L +V L G EG + E + SL +
Sbjct: 107 VRL------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--- 157
Query: 437 EKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN-PKISDFGMA 495
++ L R +G G+ YLH RI+H D+KA N+LL ++ + + DFG A
Sbjct: 158 KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 214
Query: 496 KIF---GVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
G+ ++ + I GT +MAPE M K D++S ++L ++ G
Sbjct: 215 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 331 LESLQFDF-ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE 388
L+ + +++ E + AT+ +LG G FGEV++ +G + AVK++ +
Sbjct: 62 LKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRL------EV 111
Query: 389 FK-NEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRR 447
F+ E++ A L +V L G EG + E + SL + E Q L R
Sbjct: 112 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE---QGCLPEDRA 168
Query: 448 YKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAE-MNPKISDFGMAKIF---GVDQT 503
+G G+ YLH SR RI+H D+KA N+LL ++ + + DFG A G+ +
Sbjct: 169 LYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD 225
Query: 504 QGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+ I GT +MAPE + K DV+S ++L ++ G
Sbjct: 226 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G +GEV++G G+ +AVK S S + + E+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED-----SRLR 468
+ + LY+ + LD +I+ IA G+ +LH + +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ---GNTNRIVGTYGYMAPEYAMHG 525
I HRDLK+ NIL+ I+D G+A + Q GN R VGT YMAPE +
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPE-VLDE 191
Query: 526 QFSV-------KSDVYSFGVLVLEI 543
V + D+++FG+++ E+
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G +GEV++G G+ +AVK S S + + E+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED-----SRLR 468
+ + LY+ + LD +I+ IA G+ +LH + +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ---GNTNRIVGTYGYMAPEYAMHG 525
I HRDLK+ NIL+ I+D G+A + Q GN R VGT YMAPE +
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPE-VLDE 191
Query: 526 QFSV-------KSDVYSFGVLVLEI 543
V + D+++FG+++ E+
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
IA G+ +L II+RDLK N++LD+E + KI+DFGM K D T GT
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 505
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
Y+APE + + D ++FGVL+ E++ G+
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 41/213 (19%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+G G +G V Y L Q++AVK+LSR S + E+ L+ L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 409 GFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQLDWSRRYKIIGGIA 455
F P S++ F L K Q L ++ +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
RG+ Y+H IIHRDLK SN+ ++ + +I DFG+A+ Q V T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRW 193
Query: 516 YMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
Y APE ++ ++ D++S G ++ E++ GK
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-----QGGQEFK----NEVVL 395
N+ LG G V + + P+ +E AVK + + G + QE + EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 396 VAKLQ-HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
+ K+ H N+++L LV++ + L +L E + L KI+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRAL 133
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR-IVGT 513
I LH +L I+HRDLK NILLD +MN K++DFG F G R + GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLRSVCGT 186
Query: 514 YGYMAPEYAM------HGQFSVKSDVYSFGVLVLEIITG 546
Y+APE H + + D++S GV++ ++ G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 41/213 (19%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+G G +G V Y L Q++AVK+LSR S + E+ L+ L+H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 409 GFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQLDWSRRYKIIGGIA 455
F P S++ F L K Q L ++ +
Sbjct: 86 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
RG+ Y+H IIHRDLK SN+ ++ + +I DFG+A+ Q V T
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRW 185
Query: 516 YMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
Y APE ++ ++ D++S G ++ E++ GK
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-----QGGQEFKN----EVVL 395
N+ LG G V + + P+ +E AVK + + G + QE + EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 396 VAKLQ-HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
+ K+ H N+++L LV++ + L +L E + L KI+ +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRAL 120
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR-IVGT 513
I LH +L I+HRDLK NILLD +MN K++DFG F G R + GT
Sbjct: 121 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLREVCGT 173
Query: 514 YGYMAPEYAM------HGQFSVKSDVYSFGVLVLEIITG 546
Y+APE H + + D++S GV++ ++ G
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
+G+G +GEV++G L G+ +AVK S Q + E+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED-----SRLR 468
+ + LY+ ++Q L+ ++ A G+ +LH + +
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYMAPEYAMHGQ 526
I HRD K+ N+L+ + + I+D G+A + G D N VGT YMAPE + Q
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE-VLDEQ 192
Query: 527 FSVK-------SDVYSFGVLVLEI 543
+D+++FG+++ EI
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 346 NNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSG-----QGGQEFKN----EVVL 395
N+ LG G V + + P+ +E AVK + + G + QE + EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 396 VAKLQ-HRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
+ K+ H N+++L LV++ + L +L E + L KI+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRAL 133
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR-IVGT 513
I LH +L I+HRDLK NILLD +MN K++DFG F G R + GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLREVCGT 186
Query: 514 YGYMAPEYAM------HGQFSVKSDVYSFGVLVLEIITG 546
Y+APE H + + D++S GV++ ++ G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+G+G F V + + +GQ+ AVK + + S G ++ K E + L+H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL----YLHE 463
L +V+EF+ L +E K+ + + R IL Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 464 DSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
++ IIHRD+K N+LL ++ N K+ DFG+A G VGT +MAPE
Sbjct: 149 NN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
+ DV+ GV++ +++G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 336 FDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGGQEFKN--- 391
FD E +V ++F +G+G FG+V +++ A+K +++ E +N
Sbjct: 6 FD-ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 392 EVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRR--YK 449
E+ ++ L+H LV L + E+ +V + + L Y L QQ + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-----QQNVHFKEETVKL 119
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
I + + YL RIIHRD+K NILLD + I+DF +A + +TQ T
Sbjct: 120 FICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT-- 173
Query: 510 IVGTYGYMAPEYAMHGQ---FSVKSDVYSFGVLVLEIITGKK 548
+ GT YMAPE + +S D +S GV E++ G++
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 30/245 (12%)
Query: 323 NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRS 381
N DN + E + +++ ++ +G G FGEV + Q++ A+K LS+
Sbjct: 52 NIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKF 111
Query: 382 SGQGGQE---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL--VYEFVPNKSLDYFL--Y 434
+ F E ++A +V+L FC ++K L V E++P L + Y
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNY 169
Query: 435 E-PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG 493
+ PEK W++ Y A +L L + +IHRD+K N+LLD + K++DFG
Sbjct: 170 DVPEK-----WAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 219
Query: 494 MAKIFGVDQT-QGNTNRIVGTYGYMAPEY----AMHGQFSVKSDVYSFGVLVLEIITGKK 548
+D+T + + VGT Y++PE G + + D +S GV + E++ G
Sbjct: 220 TC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG-- 275
Query: 549 NSSFY 553
++ FY
Sbjct: 276 DTPFY 280
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKIL--VYEFV-PNKSLDYFLYEPEKQQQLD 443
++ E+ ++ KL H N+V+L+ + E L V+E V ++ +P + Q
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ-- 138
Query: 444 WSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF-GVDQ 502
+R Y + +GI YLH +IIHRD+K SN+L+ + + KI+DFG++ F G D
Sbjct: 139 -ARFY--FQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 503 TQGNTNRIVGTYGYMAPEYAMHGQ--FSVKS-DVYSFGV 538
NT VGT +MAPE + FS K+ DV++ GV
Sbjct: 193 LLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGV 228
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
IA G+ +L II+RDLK N++LD+E + KI+DFGM K D T GT
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 184
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGK 547
Y+APE + + D ++FGVL+ E++ G+
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 411 CLEGEEKIL-VYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
C + E ++ V E+V L ++ ++Q++L I+ + YLHE I
Sbjct: 89 CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 142
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
I+RDLK N+LLD+E + K++D+GM K G+ + T+ GT Y+APE +
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSXFCGTPNYIAPEILRGEDYGF 200
Query: 530 KSDVYSFGVLVLEIITGK 547
D ++ GVL+ E++ G+
Sbjct: 201 SVDWWALGVLMFEMMAGR 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 354 LGEGGFGEVYK----GVLPSGQEIAVKRLSRS----SGQGGQEFKNEVVLVAKLQHRNLV 405
LG+GG+G+V++ +G+ A+K L ++ + + K E ++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
L+ G + L+ E++ L + E E D + Y + I+ + +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFY--LAEISMALGHLHQKG 141
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
II+RDLK NI+L+ + + K++DFG+ K D T T+ GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THXFCGTIEYMAPEILMRS 196
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
+ D +S G L+ +++TG
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 411 CLEGEEKIL-VYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
C + E ++ V E+V L ++ ++Q++L I+ + YLHE I
Sbjct: 121 CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 174
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
I+RDLK N+LLD+E + K++D+GM K G+ + T+ GT Y+APE +
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSTFCGTPNYIAPEILRGEDYGF 232
Query: 530 KSDVYSFGVLVLEIITGK 547
D ++ GVL+ E++ G+
Sbjct: 233 SVDWWALGVLMFEMMAGR 250
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 354 LGEGGFGEVYK----GVLPSGQEIAVKRLSRS----SGQGGQEFKNEVVLVAKLQHRNLV 405
LG+GG+G+V++ +G+ A+K L ++ + + K E ++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 406 RLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDS 465
L+ G + L+ E++ L + E E D + Y + I+ + +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFY--LAEISMALGHLHQKG 141
Query: 466 RLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
II+RDLK NI+L+ + + K++DFG+ K D T T+ GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THTFCGTIEYMAPEILMRS 196
Query: 526 QFSVKSDVYSFGVLVLEIITG 546
+ D +S G L+ +++TG
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 325 DNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQ 384
D+ ++ L D +T E ++ +G G FG V++ L E+A+K++ +
Sbjct: 19 DDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD--- 75
Query: 385 GGQEFKN-EVVLVAKLQHRNLVRLLGFCLEGEEKI------LVYEFVPNKSLDYFLYEPE 437
+ FKN E+ ++ ++H N+V L F +K LV E+VP + +
Sbjct: 76 --KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAK 133
Query: 438 KQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAK 496
+Q + + + R + Y+H + I HRD+K N+LLD K+ DFG AK
Sbjct: 134 LKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190
Query: 497 IFGVDQTQGNTNRIVGTYGYMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
I + N + I Y Y APE ++ D++S G ++ E++ G+
Sbjct: 191 ILIAGEP--NVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 41/213 (19%)
Query: 354 LGEGGFGEV---YKGVLPSGQEIAVKRLSR--SSGQGGQEFKNEVVLVAKLQHRNLVRLL 408
+G G +G V Y L Q++AVK+LSR S + E+ L+ L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 409 GFCLEGEEKILVYEFVPNKSLDYF-------------LYEPEKQQQLDWSRRYKIIGGIA 455
F P S++ F L K Q L ++ +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
RG+ Y+H IIHRDLK SN+ ++ + +I DFG+A+ Q V T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRW 193
Query: 516 YMAPEYAMHG-QFSVKSDVYSFGVLVLEIITGK 547
Y APE ++ ++ D++S G ++ E++ GK
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 411 CLEGEEKIL-VYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
C + E ++ V E+V L ++ ++Q++L I+ + YLHE I
Sbjct: 78 CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 131
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
I+RDLK N+LLD+E + K++D+GM K G+ + T+ GT Y+APE +
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSXFCGTPNYIAPEILRGEDYGF 189
Query: 530 KSDVYSFGVLVLEIITGK 547
D ++ GVL+ E++ G+
Sbjct: 190 SVDWWALGVLMFEMMAGR 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 411 CLEGEEKIL-VYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRI 469
C + E ++ V E+V L ++ ++Q++L I+ + YLHE I
Sbjct: 74 CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 127
Query: 470 IHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
I+RDLK N+LLD+E + K++D+GM K G+ + T+ GT Y+APE +
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GL-RPGDTTSXFCGTPNYIAPEILRGEDYGF 185
Query: 530 KSDVYSFGVLVLEIITGK 547
D ++ GVL+ E++ G+
Sbjct: 186 SVDWWALGVLMFEMMAGR 203
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 335 QFDF--ETIEVATNNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKN 391
Q DF +T+E+ L EGGF VY+ + SG+E A+KRL + + +
Sbjct: 15 QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ 74
Query: 392 EVVLVAKLQ-HRNLVRLLGFCLEGEEK--------ILVYEFVPNKSLDYFLYEPEKQQQL 442
EV + KL H N+V+ G+E+ +L+ E + ++ FL + E + L
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE-FLKKMESRGPL 133
Query: 443 DWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
KI R + ++H + IIHRDLK N+LL + K+ DFG A
Sbjct: 134 SCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 348 FSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSS-GQGGQEFKNEVVLVAKLQHRNLV 405
+ +G GGF +V + +G+ +A+K + +++ G K E+ + L+H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 406 RLLGFCLEGEEKI-LVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
+L LE KI +V E+ P L DY + Q +L + I + Y+H
Sbjct: 72 QLY-HVLETANKIFMVLEYCPGGELFDYII----SQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 464 DSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTN----RIVGTYGYMAP 519
HRDLK N+L D K+ DFG+ + +GN + G+ Y AP
Sbjct: 127 QG---YAHRDLKPENLLFDEYHKLKLIDFGLCA-----KPKGNKDYHLQTCCGSLAYAAP 178
Query: 520 EYAMHGQF-SVKSDVYSFGVLVLEIITG 546
E + ++DV+S G+L+ ++ G
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 352 NKLGEGGFGEVYKGVLPS-GQEIAVK----RLSRSSGQG--GQEFKNEVVLVAKLQHRNL 404
+LG G F V K S G E A K R SR+S +G +E + EV ++ ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ L + +L+ E V L FL + E L I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK 134
Query: 465 SRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTNRIVGTYGYMA 518
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVA 186
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + +++D++S GV+ +++G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 350 TDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRL 407
T LGEG + +V V L +G+E AVK + + +G EV + + Q ++N++ L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
+ F + LV+E + S+ L +KQ+ + +++ +A + +LH
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG-- 131
Query: 468 RIIHRDLKASNILLDA--EMNP-KISDFGMAKIFGVDQ-----TQGNTNRIVGTYGYMAP 519
I HRDLK NIL ++ +++P KI DF + ++ T G+ YMAP
Sbjct: 132 -IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 520 E----YAMHGQF-SVKSDVYSFGVLVLEIITG 546
E + F + D++S GV++ +++G
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 352 NKLGEGGFGEVYKGVLPS-GQEIAVK----RLSRSSGQG--GQEFKNEVVLVAKLQHRNL 404
+LG G F V K S G E A K R SR+S +G +E + EV ++ ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ L + +L+ E V L FL + E L I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK 134
Query: 465 SRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTNRIVGTYGYMA 518
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVA 186
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + +++D++S GV+ +++G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIV 511
+ARG+ +L S + IHRDL A NILL KI DFG+A+ D + R+
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL- 263
Query: 512 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MAPE +S KSDV+S+GVL+ EI +
Sbjct: 264 -PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL------PSGQEIAVKRLSRSSGQG 385
E L +D E A LG G FG+V + P+ + +AVK L G
Sbjct: 13 ERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML--KEGAT 70
Query: 386 GQEFK---NEVVLVAKL-QHRNLVRLLGFC 411
E+K E+ ++ + H N+V LLG C
Sbjct: 71 ASEYKALMTELKILTHIGHHLNVVNLLGAC 100
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 352 NKLGEGGFGEVYKGVLPS-GQEIAVK----RLSRSSGQG--GQEFKNEVVLVAKLQHRNL 404
+LG G F V K S G E A K R SR+S +G +E + EV ++ ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ L + +L+ E V L FL + E L I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK 134
Query: 465 SRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTNRIVGTYGYMA 518
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVA 186
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + +++D++S GV+ +++G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 352 NKLGEGGFGEVYKGVLPS-GQEIAVK----RLSRSSGQG--GQEFKNEVVLVAKLQHRNL 404
+LG G F V K S G E A K R SR+S +G +E + EV ++ ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ L + +L+ E V L FL + E L I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK 134
Query: 465 SRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTNRIVGTYGYMA 518
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVA 186
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + +++D++S GV+ +++G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 352 NKLGEGGFGEVYKGVLPS-GQEIAVK----RLSRSSGQG--GQEFKNEVVLVAKLQHRNL 404
+LG G F V K S G E A K R SR+S +G +E + EV ++ ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ L + +L+ E V L FL + E L I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK 134
Query: 465 SRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTNRIVGTYGYMA 518
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVA 186
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + +++D++S GV+ +++G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFG--EVYKGVLPSGQEIAVKRLSRSSGQGGQEF 389
E+L F + + ++ KLGEGGF ++ +G L G A+KR+ Q +E
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEA 73
Query: 390 KNEVVLVAKLQHRNLVRLLGFCL-EGEEKILVYEFVPNKSLDYFLYEPEK---------Q 439
+ E + H N++RL+ +CL E K + +P E E+ +
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 440 QQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFG---MAK 496
Q+ W ++ GI RG+ +H HRDLK +NILL E P + D G A
Sbjct: 134 DQILW-----LLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185
Query: 497 IFGVDQTQGNTNRIVG----TYGYMAPEY---AMHGQFSVKSDVYSFGVLVLEIITGK 547
I Q T + T Y APE H ++DV+S G ++ ++ G+
Sbjct: 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNL 404
+++ +LG G FG V++ +G A K + + + E+ ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
V L + E +++YEF+ L F ++ ++ + + + +G+ ++HE+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 465 SRLRIIHRDLKASNILLDAEMNP--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
+ +H DLK NI+ + + K+ DFG+ Q+ T GT + APE A
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVA 328
Query: 523 MHGQFSVKSDVYSFGVLVLEIITG 546
+D++S GVL +++G
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNL 404
+++ +LG G FG V++ +G A K + + + E+ ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
V L + E +++YEF+ L F ++ ++ + + + +G+ ++HE+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 465 SRLRIIHRDLKASNILLDAEMNP--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYA 522
+ +H DLK NI+ + + K+ DFG+ Q+ T GT + APE A
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVA 222
Query: 523 MHGQFSVKSDVYSFGVLVLEIITG 546
+D++S GVL +++G
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 352 NKLGEGGFGEVYKGVLPS-GQEIAVK----RLSRSSGQG--GQEFKNEVVLVAKLQHRNL 404
+LG G F V K S G E A K R SR+S +G +E + EV ++ ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHED 464
+ L + +L+ E V L FL + E L I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK 134
Query: 465 SRLRIIHRDLKASNILLDAEMNP----KISDFGMAKIF--GVDQTQGNTNRIVGTYGYMA 518
+I H DLK NI+L + P K+ DFG+A GV+ I GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVA 186
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + +++D++S GV+ +++G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 20/237 (8%)
Query: 353 KLGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQG-GQEFKNEVVLVAKLQHRNLVRLLG-F 410
K+G G +G VYK G++ L + G G E+ L+ +L+H N++ L F
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 411 CLEGEEKI-LVYEFVPNKSLDYFLYEP-----EKQQQLDWSRRYKIIGGIARGILYLHED 464
+ K+ L++++ + + +K QL ++ I GI YLH +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 465 SRLRIIHRDLKASNILLDAEMNP-----KISDFGMAKIFGVD-QTQGNTNRIVGTYGYMA 518
++HRDLK +NIL+ E P KI+D G A++F + + + +V T+ Y A
Sbjct: 148 W---VLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 519 PEYAMHGQFSVKS-DVYSFGVLVLEIITGKKNSSFYQTD-GAADLLSYVSINRVINL 573
PE + + K+ D+++ G + E++T + Q D ++ + ++R+ N+
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 260
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
+A+G+ +L + + IHRDL A NILL + KI DFG+A+ D
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL 433
+E+ +L+ H N+V LLG C + G +++ EF +L +L
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
+A+G+ +L + + IHRDL A NILL + KI DFG+A+ D
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL 433
+E+ +L+ H N+V LLG C + G +++ EF +L +L
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
+A+G+ +L + + IHRDL A NILL + KI DFG+A+ D
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 8 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL 433
+E+ +L+ H N+V LLG C + G +++ EF +L +L
Sbjct: 68 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
+A+G+ +L + + IHRDL A NILL + KI DFG+A+ D
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIIT 545
+MAPE ++++SDV+SFGVL+ EI +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 332 ESLQFDFETIEVATNNFSTDNKLGEGGFGEVYK----GVLPSG--QEIAVKRLSRSSGQG 385
E L +D E + LG G FG+V + G+ + + +AVK L +
Sbjct: 6 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 65
Query: 386 GQE-FKNEV-VLVAKLQHRNLVRLLGFCLE-GEEKILVYEFVPNKSLDYFL 433
+E+ +L+ H N+V LLG C + G +++ EF +L +L
Sbjct: 66 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 354 LGEGGFGEVYKG-VLPSGQEIAVKRLSRSSGQGGQEFKN------EVVLVAKLQ----HR 402
LG+GGFG V+ G L ++A+K + R+ G + EV L+ K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
++RLL + E +E ++ P + D F Y EK + R G + I + H
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQHCH 156
Query: 463 EDSRLRIIHRDLKASNILLDAEMN-PKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
++HRD+K NIL+D K+ DFG + D+ + + GT Y PE+
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFD---GTRVYSPPEW 209
Query: 522 -AMHGQFSVKSDVYSFGVLVLEIITG 546
+ H ++ + V+S G+L+ +++ G
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + K++DFG+AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLE 413
LG G FG V++ V S ++ + + + G K E+ ++ +HRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 414 GEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRD 473
EE ++++EF+ LD F +L+ + + + +LH + I H D
Sbjct: 73 MEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFD 127
Query: 474 LKASNILLDAEMNP--KISDFGMAKIFGVDQTQGNTNRIVGTY-GYMAPEYAMHGQFSVK 530
++ NI+ + KI +FG A+ G+ R++ T Y APE H S
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQAR----QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 531 SDVYSFGVLVLEIITG 546
+D++S G LV +++G
Sbjct: 184 TDMWSLGTLVYVLLSG 199
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSR-SSGQGGQEFKNEVVLVAKLQHR 402
+++F + LGEG +G V P+G+ +A+K++ E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N++ + + ++ + + L+ Q L I R + LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT----------QGNTNRIVG 512
+ +IHRDLK SN+L+++ + K+ DFG+A+I +D++ Q V
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEXVA 184
Query: 513 TYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEI 543
T Y APE + ++S DV+S G ++ E+
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSR-SSGQGGQEFKNEVVLVAKLQHR 402
+++F + LGEG +G V P+G+ +A+K++ E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N++ + + ++ + + L+ Q L I R + LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQT----------QGNTNRIVG 512
+ +IHRDLK SN+L+++ + K+ DFG+A+I +D++ Q V
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEYVA 184
Query: 513 TYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEI 543
T Y APE + ++S DV+S G ++ E+
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVRLLGFCL 412
+G+G FGEV++G G+E+AVK S S + F+ E+ L+H N+ LGF
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENI---LGFIA 90
Query: 413 EGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--------KIIGGIARGILYLHED 464
+ + + S DY E D+ RY K+ A G+ +LH +
Sbjct: 91 ADNKDNGTWTQLWLVS-DYH----EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 465 -----SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYM 517
+ I HRDLK+ NIL+ I+D G+A D N VGT YM
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 518 APEY------AMHGQFSVKSDVYSFGVLVLEI 543
APE H + ++D+Y+ G++ EI
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + K++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 47/219 (21%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVRLLGFCL 412
+G+G FGEV++G G+E+AVK S S + F+ E+ L+H N+ LGF
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENI---LGFIA 65
Query: 413 EGEEK-------ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--------KIIGGIARG 457
+ LV ++ + SL D+ RY K+ A G
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSL------------FDYLNRYTVTVEGMIKLALSTASG 113
Query: 458 ILYLHED-----SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRI 510
+ +LH + + I HRDLK+ NIL+ I+D G+A D N
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 173
Query: 511 VGTYGYMAPEY------AMHGQFSVKSDVYSFGVLVLEI 543
VGT YMAPE H + ++D+Y+ G++ EI
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVRLLGFCL 412
+G+G FGEV++G G+E+AVK S S + F+ E+ L+H N+ LGF
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENI---LGFIA 103
Query: 413 EGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--------KIIGGIARGILYLHED 464
+ + + S DY E D+ RY K+ A G+ +LH +
Sbjct: 104 ADNKDNGTWTQLWLVS-DYH----EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 465 -----SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYM 517
+ I HRDLK+ NIL+ I+D G+A D N VGT YM
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 518 APEY------AMHGQFSVKSDVYSFGVLVLEI 543
APE H + ++D+Y+ G++ EI
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
V ++ + +G G + E + V + E AVK + +S +E + +L+ QH
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQH 80
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N++ L +G+ LV E + L D L +Q+ ++ I + + Y
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEY 136
Query: 461 LHEDSRLRIIHRDLKASNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
LH ++HRDLK SNIL +D NP +I DFG AK + G T +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NGLLMTPCYTANF 191
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYV 565
+APE + D++S G+L+ ++ G + +D ++L+ +
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQH 401
V ++ + +G G + E + V + E AVK + +S +E + +L+ QH
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQH 80
Query: 402 RNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILY 460
N++ L +G+ LV E + L D L +Q+ ++ I + + Y
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEY 136
Query: 461 LHEDSRLRIIHRDLKASNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGY 516
LH ++HRDLK SNIL +D NP +I DFG AK + G T +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NGLLMTPCYTANF 191
Query: 517 MAPEYAMHGQFSVKSDVYSFGVLVLEIITG 546
+APE + D++S G+L+ ++ G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 194
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 28/244 (11%)
Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--R 377
P++ D+D S E I V +S ++G GG +V++ + Q A+K
Sbjct: 33 PDLGTDDDDKASSSAN---ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN 89
Query: 378 LSRSSGQGGQEFKNEVVLVAKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE 435
L + Q ++NE+ + KLQ + ++RL + + + +V E N L+ +L
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-- 146
Query: 436 PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
+K++ +D R + + +H+ I+H DLK +N L+ M K+ DFG+A
Sbjct: 147 -KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
Query: 496 KIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS------------DVYSFGVLVLEI 543
D T + VGT YM PE A+ S + DV+S G ++ +
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260
Query: 544 ITGK 547
GK
Sbjct: 261 TYGK 264
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 387 QEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL----DYFLYEPEKQQQL 442
+FKNE+ ++ +++ + G +E ++YE++ N S+ +YF +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 443 DWSRRYK-IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVD 501
+ K II + Y+H + I HRD+K SNIL+D K+SDFG ++
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 502 QTQGNTNRIVGTYGYMAPE-YAMHGQFS-VKSDVYSFGV 538
+ +G+ GTY +M PE ++ ++ K D++S G+
Sbjct: 206 KIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 47/219 (21%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVRLLGFCL 412
+G+G FGEV++G G+E+AVK S S + F+ E+ L+H N+ LGF
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENI---LGFIA 64
Query: 413 EGEEK-------ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--------KIIGGIARG 457
+ LV ++ + SL D+ RY K+ A G
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSL------------FDYLNRYTVTVEGMIKLALSTASG 112
Query: 458 ILYLHED-----SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRI 510
+ +LH + + I HRDLK+ NIL+ I+D G+A D N
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 172
Query: 511 VGTYGYMAPEY------AMHGQFSVKSDVYSFGVLVLEI 543
VGT YMAPE H + ++D+Y+ G++ EI
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVRLLGFCL 412
+G+G FGEV++G G+E+AVK S S + F+ E+ L+H N+ LGF
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENI---LGFIA 70
Query: 413 EGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--------KIIGGIARGILYLHED 464
+ + + S DY E D+ RY K+ A G+ +LH +
Sbjct: 71 ADNKDNGTWTQLWLVS-DYH----EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 465 -----SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYM 517
+ I HRDLK+ NIL+ I+D G+A D N VGT YM
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 518 APEY------AMHGQFSVKSDVYSFGVLVLEI 543
APE H + ++D+Y+ G++ EI
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSR-SSGQGGQEFKNEVVLVAKLQHR 402
+++F + LGEG +G V P+G+ +A+K++ E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
N++ + + ++ + + L+ Q L I R + LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTN----------RIVG 512
+ +IHRDLK SN+L+++ + K+ DFG+A+I +D++ + + V
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMVEFVA 184
Query: 513 TYGYMAPEYAM-HGQFSVKSDVYSFGVLVLEI 543
T Y APE + ++S DV+S G ++ E+
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQGGQEFKNEVVL 395
F+++ V +S ++G GG +V++ + Q A+K L + Q ++NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 396 VAKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
+ KLQ + ++RL + + + +V E N L+ +L +K++ +D R
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
+ + +H+ I+H DLK +N L+ M K+ DFG+A D T + VGT
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 514 YGYMAPEYAMHGQFSVKS------------DVYSFGVLVLEIITGK 547
YM PE A+ S + DV+S G ++ + GK
Sbjct: 192 VNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGGQEFKN-EVVLVAKLQHRNLVRLLGFCL 412
+G+G FGEV++G G+E+AVK S S + F+ E+ L+H N+ LGF
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENI---LGFIA 67
Query: 413 EGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--------KIIGGIARGILYLHED 464
+ + + S DY E D+ RY K+ A G+ +LH +
Sbjct: 68 ADNKDNGTWTQLWLVS-DYH----EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 465 -----SRLRIIHRDLKASNILLDAEMNPKISDFGMAKIF--GVDQTQGNTNRIVGTYGYM 517
+ I HRDLK+ NIL+ I+D G+A D N VGT YM
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 518 APEY------AMHGQFSVKSDVYSFGVLVLEI 543
APE H + ++D+Y+ G++ EI
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQEI--AVKRLSRSSGQGGQEFKNEV----VLVAKLQHRNLVRL 407
+G+G FG+V +E+ AVK L + + +E K+ + VL+ ++H LV L
Sbjct: 46 IGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 408 LGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSR 466
F + +K+ V +++ L Y L ++++ R IA + YLH
Sbjct: 105 -HFSFQTADKLYFVLDYINGGELFYHL---QRERCFLEPRARFYAAEIASALGYLHS--- 157
Query: 467 LRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGN--TNRIVGTYGYMAPEYAMH 524
L I++RDLK NILLD++ + ++DFG+ K + + N T+ GT Y+APE
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 525 GQFSVKSDVYSFGVLVLEIITG 546
+ D + G ++ E++ G
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 151 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 202
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 28/244 (11%)
Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--R 377
P++ D+D S E I V +S ++G GG +V++ + Q A+K
Sbjct: 33 PDLGTDDDDKASSSAN---ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN 89
Query: 378 LSRSSGQGGQEFKNEVVLVAKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE 435
L + Q ++NE+ + KLQ + ++RL + + + +V E N L+ +L
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-- 146
Query: 436 PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
+K++ +D R + + +H+ I+H DLK +N L+ M K+ DFG+A
Sbjct: 147 -KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
Query: 496 KIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS------------DVYSFGVLVLEI 543
D T + VGT YM PE A+ S + DV+S G ++ +
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260
Query: 544 ITGK 547
GK
Sbjct: 261 TYGK 264
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 200
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 200
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + +++DFG+AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 228
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 228
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAP 208
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAP 193
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
T+ + +G G + + + + E AVK + +S +E + +L+ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 404 LVRLLGFCLEGEEKILVYEFVPN-KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
++ L +G+ +V E + + LD L +Q+ ++ I + + YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLH 133
Query: 463 EDSRLRIIHRDLKASNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
++HRDLK SNIL +D NP +I DFG AK + G T ++A
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANFVA 188
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + D++S GVL+ ++TG
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 354 LGEGGFG--EVYKGVLPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFC 411
+G G FG + + L + + +AVK + R + + + E++ L+H N+VR
Sbjct: 28 IGSGNFGVARLMRDKL-TKELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRFKEVI 85
Query: 412 LEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIH 471
L ++ E+ L + + + D +R + + G+ Y H ++I H
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSE-DEARFF--FQQLLSGVSYCHS---MQICH 139
Query: 472 RDLKASNILLDAEMNP--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSV 529
RDLK N LLD P KI DFG +K V +Q + VGT Y+APE + ++
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLRQEYDG 196
Query: 530 K-SDVYSFGVLVLEIITG 546
K +DV+S GV + ++ G
Sbjct: 197 KIADVWSCGVTLYVMLVG 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 102/277 (36%), Gaps = 82/277 (29%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQE-FKNEVV 394
DFE I+ +G GGFG V++ A+KR+ + + +E EV
Sbjct: 7 DFEPIQC----------MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 56
Query: 395 LVAKLQHRNLVRLLGFCLEGEEKILVYE----FVPNKSLDYFLYEPEK------------ 438
+AKL+H +VR LE + E ++ ++S D+ L P
Sbjct: 57 ALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMD 116
Query: 439 ----------------------QQQL-------DWSRR------------YKIIGGIARG 457
Q QL DW R I IA
Sbjct: 117 PFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEA 176
Query: 458 ILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQ----------GNT 507
+ +LH ++HRDLK SNI + K+ DFG+ D+ +
Sbjct: 177 VEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH 233
Query: 508 NRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEII 544
VGT YM+PE +S K D++S G+++ E++
Sbjct: 234 XGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAP 228
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQGGQEFKNEVVLV 396
E I V +S ++G GG +V++ + Q A+K L + Q ++NE+ +
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 64
Query: 397 AKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
KLQ + ++RL + + + +V E N L+ +L +K++ +D R +
Sbjct: 65 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNM 120
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+ +H+ I+H DLK +N L+ M K+ DFG+A D T + VGT
Sbjct: 121 LEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 515 GYMAPEYAMHGQFSVKS------------DVYSFGVLVLEIITGK 547
YM PE A+ S + DV+S G ++ + GK
Sbjct: 177 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
I+ + + +LH ++ I+HRDLK NILLD M ++SDFG F G R
Sbjct: 205 IMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFG----FSCHLEPGEKLR 257
Query: 510 -IVGTYGYMAPEY------AMHGQFSVKSDVYSFGVLVLEIITG 546
+ GT GY+APE H + + D+++ GV++ ++ G
Sbjct: 258 ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQGGQEFKNEVVLV 396
E I V +S ++G GG +V++ + Q A+K L + Q ++NE+ +
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 60
Query: 397 AKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
KLQ + ++RL + + + +V E N L+ +L +K++ +D R +
Sbjct: 61 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNM 116
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+ +H+ I+H DLK +N L+ M K+ DFG+A D T + VGT
Sbjct: 117 LEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 515 GYMAPEYAMHGQFSVKS------------DVYSFGVLVLEIITGK 547
YM PE A+ S + DV+S G ++ + GK
Sbjct: 173 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 339 ETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQGGQEFKNEVVLV 396
E I V +S ++G GG +V++ + Q A+K L + Q ++NE+ +
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61
Query: 397 AKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGI 454
KLQ + ++RL + + + +V E N L+ +L +K++ +D R +
Sbjct: 62 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNM 117
Query: 455 ARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTY 514
+ +H+ I+H DLK +N L+ M K+ DFG+A D T + VGT
Sbjct: 118 LEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 515 GYMAPEYAMHGQFSVKS------------DVYSFGVLVLEIITGK 547
YM PE A+ S + DV+S G ++ + GK
Sbjct: 174 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+++D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ ++ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 369 SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
S + +AVK + R + + K E++ L+H N+VR L +V E+
Sbjct: 42 SNELVAVKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 100
Query: 429 LDYFLYEPEKQQQLDWSRRY--KIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN 486
L + + + D +R + ++I G++ Y H +++ HRDLK N LLD
Sbjct: 101 LFERICNAGRFSE-DEARFFFQQLISGVS----YCHA---MQVCHRDLKLENTLLDGSPA 152
Query: 487 P--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK-SDVYSFGVLVLEI 543
P KI DFG +K V +Q + VGT Y+APE + ++ K +DV+S GV + +
Sbjct: 153 PRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 209
Query: 544 ITG 546
+ G
Sbjct: 210 LVG 212
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 354 LGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK-NEVVLVAKLQHRNLVRLLGFC 411
LG+G V++G +G A+K + S + + E ++ KL H+N+V+L F
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--FA 74
Query: 412 LEGE----EKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
+E E K+L+ EF P SL L EP L S ++ + G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 468 RIIHRDLKASNILL----DAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY-- 521
I+HR++K NI+ D + K++DFG A+ D+ + GT Y+ P+
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVXLYGTEEYLHPDMYE 188
Query: 522 ------AMHGQFSVKSDVYSFGVLVLEIITG 546
++ D++S GV TG
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 354 LGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFK-NEVVLVAKLQHRNLVRLLGFC 411
LG+G V++G +G A+K + S + + E ++ KL H+N+V+L F
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--FA 74
Query: 412 LEGE----EKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRL 467
+E E K+L+ EF P SL L EP L S ++ + G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 468 RIIHRDLKASNILL----DAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY-- 521
I+HR++K NI+ D + K++DFG A+ D+ + GT Y+ P+
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYE 188
Query: 522 ------AMHGQFSVKSDVYSFGVLVLEIITG 546
++ D++S GV TG
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVLPSGQE-IAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
++ + +G G FG E +AVK + R + + K E++ L+H N
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE-KIDENVKREIINHRSLRHPN 76
Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--KIIGGIARGILYL 461
+VR L +V E+ L + + + D +R + ++I G++ Y
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSE-DEARFFFQQLISGVS----YA 131
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
H +++ HRDLK N LLD P KI+DFG +K V +Q + VGT Y+AP
Sbjct: 132 HA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQPKS--AVGTPAYIAP 185
Query: 520 EYAMHGQFSVK-SDVYSFGVLVLEIITG 546
E + ++ K +DV+S GV + ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 345 TNNFSTDNKLGEGGFGEVYKGVL-PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRN 403
T+ + +G G + + + + E AVK + +S +E + +L+ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 404 LVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
++ L +G+ +V E L D L +Q+ ++ I + + YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLH 133
Query: 463 EDSRLRIIHRDLKASNIL-LDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMA 518
++HRDLK SNIL +D NP +I DFG AK + G T ++A
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLXTPCYTANFVA 188
Query: 519 PEYAMHGQFSVKSDVYSFGVLVLEIITG 546
PE + D++S GVL+ +TG
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 28/244 (11%)
Query: 320 PEVNADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--R 377
P++ D+D S E I V +S ++G GG +V++ + Q A+K
Sbjct: 33 PDLGTDDDDKASSSAN---ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN 89
Query: 378 LSRSSGQGGQEFKNEVVLVAKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYE 435
L + Q ++NE+ + KLQ + ++RL + + + +V E N L+ +L
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-- 146
Query: 436 PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMA 495
+K++ +D R + + +H+ I+H DLK +N L+ M K+ DFG+A
Sbjct: 147 -KKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
Query: 496 KIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKS------------DVYSFGVLVLEI 543
D T + VG YM PE A+ S + DV+S G ++ +
Sbjct: 202 NQMQPDTTSVVKDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 260
Query: 544 ITGK 547
GK
Sbjct: 261 TYGK 264
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 25/226 (11%)
Query: 338 FETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEIAVK--RLSRSSGQGGQEFKNEVVL 395
F+++ V +S ++G GG +V++ + Q A+K L + Q ++NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 396 VAKLQHRN--LVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG 453
+ KLQ + ++RL + + + +V E N L+ +L +K++ +D R
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
+ + +H+ I+H DLK +N L+ M K+ DFG+A D + VGT
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 514 YGYMAPEYAMHGQFSVKS------------DVYSFGVLVLEIITGK 547
YM PE A+ S + DV+S G ++ + GK
Sbjct: 192 VNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 369 SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
S + +AVK + R K E++ L+H N+VR L +V E+
Sbjct: 43 SNELVAVKYIERGEKIAAN-VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 429 LDYFLYEPEKQQQLDWSRRY--KIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN 486
L + + + D +R + ++I G++ Y H +++ HRDLK N LLD
Sbjct: 102 LFERICNAGRFSE-DEARFFFQQLISGVS----YCHA---MQVCHRDLKLENTLLDGSPA 153
Query: 487 P--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK-SDVYSFGVLVLEI 543
P KI DFG +K V +Q + VGT Y+APE + ++ K +DV+S GV + +
Sbjct: 154 PRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 544 ITG 546
+ G
Sbjct: 211 LVG 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 353 KLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQG--GQEFKNEVVLVAKLQHRNLVRLLG 409
K+GEG +G V+K +GQ +A+K+ S + E+ ++ +L+H NLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 410 FCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYK-IIGGIARGILYLHEDSRLR 468
LV+E+ + L+E ++ Q+ K I + + + H+ +
Sbjct: 70 VFRRKRRLHLVFEYCDHT----VLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN--- 122
Query: 469 IIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM-HGQF 527
IHRD+K NIL+ K+ DFG A++ + V T Y +PE + Q+
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGDTQY 180
Query: 528 SVKSDVYSFGVLVLEIITG 546
DV++ G + E+++G
Sbjct: 181 GPPVDVWAIGCVFAELLSG 199
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGGQE---FKNE 392
DFE I+V +G G FGEV + + + I A+K L++ E F+ E
Sbjct: 75 DFEIIKV----------IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 124
Query: 393 --VVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYK 449
V++ Q + L + + E + LV ++ L L + E + D +R Y
Sbjct: 125 RDVLVNGDCQ---WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY- 180
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
IG + I +H+ L +HRD+K N+LLD + +++DFG D T ++
Sbjct: 181 -IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-QSSV 235
Query: 510 IVGTYGYMAPEY--AMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFY 553
VGT Y++PE AM G++ + D +S GV + E++ G+ + FY
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 352 NKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGF 410
+LG G FG V++ V +G+ K ++ KNE+ ++ +L H L+ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 411 CLEGEEKILVYEFVPNKSL-------DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
+ E +L+ EF+ L DY + E E +++ R+ G+ ++HE
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE---VINYMRQ------ACEGLKHMHE 167
Query: 464 DSRLRIIHRDLKASNILLDAEM--NPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEY 521
S I+H D+K NI+ + + + KI DFG+A D+ T T + APE
Sbjct: 168 HS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT---TATAEFAAPEI 221
Query: 522 AMHGQFSVKSDVYSFGVLVLEIITG 546
+D+++ GVL +++G
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 18/226 (7%)
Query: 351 DNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLL 408
D LGEG F K V S Q AVK +S+ Q+ E+ + + H N+V+L
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLH 72
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
+ LV E + L +K++ + I+ + + ++H+ +
Sbjct: 73 EVFHDQLHTFLVMELLNGGEL---FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VG 126
Query: 469 IIHRDLKASNILLDAE---MNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHG 525
++HRDLK N+L E + KI DFG A++ D T T Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQN 184
Query: 526 QFSVKSDVYSFGVLVLEIITGKKNSSFYQTDGAADLLSYVSINRVI 571
+ D++S GV++ +++G+ F D + S V I + I
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ--VPFQSHDRSLTCTSAVEIMKKI 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 354 LGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVVLVAKLQH--RNL 404
LG GGFG VY G+ S +A+K + + E N EVVL+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYKIIGGIARGILYL 461
+RLL + + +L+ E P D F + E+ Q++L S ++++ + +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 126
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H ++HRD+K NIL+D K+ DFG + D + + GT Y PE
Sbjct: 127 HNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSPPE 179
Query: 521 YAMHGQFSVKS-DVYSFGVLVLEIITG 546
+ + ++ +S V+S G+L+ +++ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
+ ++ D ++ GVL+ E+ G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGGQE---FKNE 392
DFE I+V +G G FGEV + + + I A+K L++ E F+ E
Sbjct: 91 DFEIIKV----------IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 140
Query: 393 --VVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYK 449
V++ Q + L + + E + LV ++ L L + E + D +R Y
Sbjct: 141 RDVLVNGDCQ---WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY- 196
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR 509
IG + I +H+ L +HRD+K N+LLD + +++DFG D T ++
Sbjct: 197 -IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-QSSV 251
Query: 510 IVGTYGYMAPEY--AMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFY 553
VGT Y++PE AM G++ + D +S GV + E++ G+ + FY
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFY 298
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 152 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 203
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 204 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 152 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 203
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 204 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 152 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 203
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 204 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 151 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 202
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 203 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 138 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 189
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 190 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+G+G F V + + +GQ+ AVK + + S G ++ K E + L+H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL----YLHE 463
L +V+EF+ L +E K+ + + R IL Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 464 DSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
++ IIHRD+K +LL ++ N K+ FG+A G VGT +MAPE
Sbjct: 149 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
+ DV+ GV++ +++G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 151 VL----EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 202
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 203 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 151 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 202
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 203 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 152 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 203
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 204 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 166 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 217
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 218 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 151 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 202
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 203 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVK-----RLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL 407
+G+G F V + + +GQ+ AVK + + S G ++ K E + L+H ++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 408 LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGIL----YLHE 463
L +V+EF+ L +E K+ + + R IL Y H+
Sbjct: 94 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 464 DSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
++ IIHRD+K +LL ++ N K+ FG+A G VGT +MAPE
Sbjct: 151 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPE 205
Query: 521 YAMHGQFSVKSDVYSFGVLVLEIITG 546
+ DV+ GV++ +++G
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 138 VL----EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 189
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 190 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG-----------QEFKNEVVLVAKLQHR 402
+ G +G V GV G +A+KR+ + G + E+ L+ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--KIIGGIARGILY 460
N++ L + EE + ++ + + L + Q++ S ++ + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LHE ++HRDL NILL + I DF +A+ D N V Y APE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGK---KNSSFY 553
M + F+ D++S G ++ E+ K + S+FY
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 139 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 190
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 191 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 139 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 190
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 191 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 139 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 190
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 191 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 166 VL----EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 217
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 218 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+V N+F LG+G FG+V +L +G+ A+K L + E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 398 KLQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG- 453
LQ+ + L + + +++ V E+ L + L ++++ R + G
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I + YLH +++RD+K N++LD + + KI+DFG+ K D T GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 112 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 170
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 171 VL----EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 222
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 223 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 351 DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLL 408
++ LGEG V + L + QE AVK + + G EV ++ + Q HRN++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
F E + LV+E + S+ +++ +L+ S ++ +A + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS---VVVQDVASALDFLHNKG--- 131
Query: 469 IIHRDLKASNILLDA--EMNP-KISDFGMA---KIFGVDQTQGNTNRIV---GTYGYMAP 519
I HRDLK NIL + +++P KI DFG+ K+ G D + +T ++ G+ YMAP
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNG-DCSPISTPELLTPCGSAEYMAP 190
Query: 520 EY--AMHGQFSV---KSDVYSFGVLVLEIITG 546
E A + S+ + D++S GV++ +++G
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKRLSRSSGQGG-----------QEFKNEVVLVAKLQHR 402
+ G +G V GV G +A+KR+ + G + E+ L+ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 403 NLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRY--KIIGGIARGILY 460
N++ L + EE + ++ + + L + Q++ S ++ + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 461 LHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
LHE ++HRDL NILL + I DF +A+ D N V Y APE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 521 YAMHGQ-FSVKSDVYSFGVLVLEIITGK---KNSSFY 553
M + F+ D++S G ++ E+ K + S+FY
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 354 LGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVVLVAKLQH--RNL 404
LG GGFG VY G+ S +A+K + + E N EVVL+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYKIIGGIARGILYL 461
+RLL + + +L+ E P D F + E+ Q++L S ++++ + +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 126
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H ++HRD+K NIL+D K+ DFG + D + + GT Y PE
Sbjct: 127 HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSPPE 179
Query: 521 YAMHGQFSVKS-DVYSFGVLVLEIITG 546
+ + ++ +S V+S G+L+ +++ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 123 VL----EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 174
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 175 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 124 VL----EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 175
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 176 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 124 VL----EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 175
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 176 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+V N+F LG+G FG+V +L +G+ A+K L + E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 398 KLQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG- 453
LQ+ + L + + +++ V E+ L + L ++++ R + G
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR-IVG 512
I + YLH +++RD+K N++LD + + KI+DFG+ K G+ + G T + G
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCG 167
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
T Y+APE + D + GV++ E++ G+ FY D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 99 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 157
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 158 VL----EAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 209
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 210 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+V N+F LG+G FG+V +L +G+ A+K L + E + V
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 398 KLQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG- 453
LQ+ + L + + +++ V E+ L + L ++++ R + G
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 116
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I + YLH +++RD+K N++LD + + KI+DFG+ K D T GT
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 171
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 212
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 121
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 122 VL----EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 173
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 174 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 460 YLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAP 519
YLH L +I+RDLK N+L+D + +++DFG AK + +G T + GT +AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAP 207
Query: 520 EYAMHGQFSVKSDVYSFGVLVLEIITG 546
E + ++ D ++ GVL+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 354 LGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVVLVAKLQH--RNL 404
LG GGFG VY G+ S +A+K + + E N EVVL+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYKIIGGIARGILYL 461
+RLL + + +L+ E P D F + E+ Q++L S ++++ + +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL----EAVRHC 126
Query: 462 HEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
H ++HRD+K NIL+D K+ DFG + D + + GT Y PE
Sbjct: 127 HNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD---GTRVYSPPE 179
Query: 521 YAMHGQFSVKS-DVYSFGVLVLEIITG 546
+ + ++ +S V+S G+L+ +++ G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+V N+F LG+G FG+V +L +G+ A+K L + E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 398 KLQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG- 453
LQ+ + L + + +++ V E+ L + L ++++ R + G
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR-IVG 512
I + YLH +++RD+K N++LD + + KI+DFG+ K G+ + G T + G
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCG 167
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
T Y+APE + D + GV++ E++ G+ FY D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 124 VL----EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 175
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 176 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 19/221 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
V N F LG+G FG+V +L +G+ A+K L + E + +
Sbjct: 7 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 399 LQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
LQ+ + L + + +++ V E+ L +F E+ D +R Y I
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYG--AEIV 120
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YLH S +++RDLK N++LD + + KI+DFG+ K G+ + GT
Sbjct: 121 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GI-KDGATMKXFCGTPE 176
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+V N+F LG+G FG+V +L +G+ A+K L + E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 398 KLQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG- 453
LQ+ + L + + +++ V E+ L + L ++++ R + G
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGT 513
I + YLH +++RD+K N++LD + + KI+DFG+ K D T GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168
Query: 514 YGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 19/221 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
V N F LG+G FG+V +L +G+ A+K L + E + +
Sbjct: 5 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 399 LQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
LQ+ + L + + +++ V E+ L +F E+ D +R Y I
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYG--AEIV 118
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YLH S +++RDLK N++LD + + KI+DFG+ K G+ + GT
Sbjct: 119 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GI-KDGATMKXFCGTPE 174
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 213
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 19/221 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
V N F LG+G FG+V +L +G+ A+K L + E + +
Sbjct: 6 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 399 LQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
LQ+ + L + + +++ V E+ L +F E+ D +R Y I
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYG--AEIV 119
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YLH S +++RDLK N++LD + + KI+DFG+ K G+ + GT
Sbjct: 120 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GI-KDGATMKXFCGTPE 175
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+V N+F LG+G FG+V +L +G+ A+K L + E + V
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 398 KLQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG- 453
LQ+ + L + + +++ V E+ L + L ++++ R + G
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 118
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR-IVG 512
I + YLH SR +++RD+K N++LD + + KI+DFG+ K G+ + G T + G
Sbjct: 119 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCG 172
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
T Y+APE + D + GV++ E++ G+ FY D
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVA 397
+V N+F LG+G FG+V +L +G+ A+K L + E + V
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 398 KLQH--RNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGG- 453
LQ+ + L + + +++ V E+ L + L ++++ R + G
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 454 IARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNR-IVG 512
I + YLH SR +++RD+K N++LD + + KI+DFG+ K G+ + G T + G
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKE-GI--SDGATMKXFCG 167
Query: 513 TYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
T Y+APE + D + GV++ E++ G+ FY D
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEK---QQQLDWSRRYK 449
L+ K+ ++RLL + + +L+ E P D F + E+ Q++L S ++
Sbjct: 87 LLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQ 145
Query: 450 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTN 508
++ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 146 VL----EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD 197
Query: 509 RIVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 198 ---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 309 IRKAKNKYNAVPEV-NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL 367
+RK KN N + + N I L D+E ++V +G G FGEV
Sbjct: 46 LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKV----------IGRGAFGEVQLVRH 95
Query: 368 PSGQEI-AVKRLSRSSGQGGQE---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 423
S +++ A+K LS+ + F E ++A +V+L + +V E+
Sbjct: 96 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 155
Query: 424 VPNKSLDYFL--YE-PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL 480
+P L + Y+ PEK W+R Y A +L L + IHRD+K N+L
Sbjct: 156 MPGGDLVNLMSNYDVPEK-----WARFY-----TAEVVLALDAIHSMGFIHRDVKPDNML 205
Query: 481 LDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM----HGQFSVKSDVYSF 536
LD + K++DFG + + VGT Y++PE G + + D +S
Sbjct: 206 LDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 537 GVLVLEIITGKKNSSFY 553
GV + E++ G ++ FY
Sbjct: 265 GVFLYEMLVG--DTPFY 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 309 IRKAKNKYNAVPEV-NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL 367
+RK KN N + + N I L D+E ++V +G G FGEV
Sbjct: 41 LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKV----------IGRGAFGEVQLVRH 90
Query: 368 PSGQEI-AVKRLSRSSGQGGQE---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 423
S +++ A+K LS+ + F E ++A +V+L + +V E+
Sbjct: 91 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 150
Query: 424 VPNKSLDYFL--YE-PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL 480
+P L + Y+ PEK W+R Y A +L L + IHRD+K N+L
Sbjct: 151 MPGGDLVNLMSNYDVPEK-----WARFY-----TAEVVLALDAIHSMGFIHRDVKPDNML 200
Query: 481 LDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM----HGQFSVKSDVYSF 536
LD + K++DFG + + VGT Y++PE G + + D +S
Sbjct: 201 LDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259
Query: 537 GVLVLEIITGKKNSSFY 553
GV + E++ G ++ FY
Sbjct: 260 GVFLYEMLVG--DTPFY 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 309 IRKAKNKYNAVPEV-NADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVL 367
+RK KN N + + N I L D+E ++V +G G FGEV
Sbjct: 46 LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKV----------IGRGAFGEVQLVRH 95
Query: 368 PSGQEI-AVKRLSRSSGQGGQE---FKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEF 423
S +++ A+K LS+ + F E ++A +V+L + +V E+
Sbjct: 96 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 155
Query: 424 VPNKSLDYFL--YE-PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL 480
+P L + Y+ PEK W+R Y A +L L + IHRD+K N+L
Sbjct: 156 MPGGDLVNLMSNYDVPEK-----WARFY-----TAEVVLALDAIHSMGFIHRDVKPDNML 205
Query: 481 LDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAM----HGQFSVKSDVYSF 536
LD + K++DFG + + VGT Y++PE G + + D +S
Sbjct: 206 LDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 537 GVLVLEIITGKKNSSFY 553
GV + E++ G ++ FY
Sbjct: 265 GVFLYEMLVG--DTPFY 279
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 330 TLESLQFDFETIE-VATNNFSTDNKLGEGGFGEVYK-GVLPSGQEIAVKRLSRSSGQGGQ 387
TL+S +D E +F ++LG G +GEV+K G+ AVKR S S +G +
Sbjct: 40 TLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPK 98
Query: 388 EFKNEVVLVAKL----QHRNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLD 443
+ ++ V QH VRL EE ++Y L L P QQ +
Sbjct: 99 DRARKLAEVGSHEKVGQHPCCVRLEQAW---EEGGILY-------LQTELCGPSLQQHCE 148
Query: 444 -WSR---RYKIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFG 499
W ++ G + +L L ++H D+K +NI L K+ DFG+ G
Sbjct: 149 AWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208
Query: 500 VDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEI 543
T G G YMAPE + G + +DV+S G+ +LE+
Sbjct: 209 ---TAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 19/221 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
V N F LG+G FG+V +L +G+ A+K L + E + +
Sbjct: 145 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 399 LQHRN--LVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
LQ+ + L + + +++ V E+ L +F E+ D +R Y I
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYG--AEIV 258
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YLH S +++RDLK N++LD + + KI+DFG+ K D T GT
Sbjct: 259 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPE 314
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 353
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--------FKNEVVLV 396
+ + LG G GEV + +++A+K +S+ G + E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIA 455
KL H ++++ F + E+ +V E + L D + ++ Y+++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVG 512
YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 178
Query: 513 TYGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 555
T Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 40/211 (18%)
Query: 330 TLESLQFDFET--IEVATNNFSTDNKLGEGGFGE-VYKGVLPSGQEIAVKR-LSRSSGQG 385
+LE D ET + V +F + LG G G VY+G+ +++AVKR L
Sbjct: 6 SLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFA 64
Query: 386 GQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKI----------LVYEFVPNKSLDYFLYE 435
+E + +L +H N++R FC E + + + E+V K + E
Sbjct: 65 DREVQ---LLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE 119
Query: 436 PEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNILL-----DAEMNPKIS 490
P ++ G+ +LH L I+HRDLK NIL+ ++ IS
Sbjct: 120 P-----------ITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMIS 165
Query: 491 DFGMAKIFGVDQTQ-GNTNRIVGTYGYMAPE 520
DFG+ K V + + + GT G++APE
Sbjct: 166 DFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 19/221 (8%)
Query: 343 VATNNFSTDNKLGEGGFGEVYKGVL----PSGQEIAVKRLSRSSGQGGQEFKNEVVLVAK 398
V N F LG+G FG+V +L +G+ A+K L + E + +
Sbjct: 148 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 399 LQHRN--LVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIA 455
LQ+ + L + + +++ V E+ L +F E+ D +R Y I
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYG--AEIV 261
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIVGTYG 515
+ YLH S +++RDLK N++LD + + KI+DFG+ K D T GT
Sbjct: 262 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPE 317
Query: 516 YMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSSFYQTD 556
Y+APE + D + GV++ E++ G+ FY D
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 356
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 369 SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
S + +AVK + R + + K E++ L+H N+VR L +V E+
Sbjct: 43 SNELVAVKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 429 LDYFLYEPEKQQQLDWSRRY--KIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN 486
L + + + D +R + ++I G++ Y H +++ HRDLK N LLD
Sbjct: 102 LFERICNAGRFSE-DEARFFFQQLISGVS----YCHA---MQVCHRDLKLENTLLDGSPA 153
Query: 487 P--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK-SDVYSFGVLVLEI 543
P KI FG +K + +T VGT Y+APE + ++ K +DV+S GV + +
Sbjct: 154 PRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 544 ITG 546
+ G
Sbjct: 211 LVG 213
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--------FKNEVVLV 396
+ + LG G GEV + +++A+K +S+ G + E+ ++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIA 455
KL H ++++ F + E+ +V E + L D + ++ Y+++ +
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVG 512
YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + G
Sbjct: 128 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 177
Query: 513 TYGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 555
T Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--------FKNEVVLV 396
+ + LG G GEV + +++A+K +S+ G + E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIA 455
KL H ++++ F + E+ +V E + L D + ++ Y+++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVG 512
YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 178
Query: 513 TYGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 555
T Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ--------EFKNEVVLVAKLQHRNL 404
LG G GEV + +++A++ +S+ G + E+ ++ KL H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
+++ F + E+ +V E + L D + ++ Y+++ + YLHE
Sbjct: 217 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHE 271
Query: 464 DSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
+ IIHRDLK N+LL ++ KI+DFG +KI G + GT Y+APE
Sbjct: 272 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPE 325
Query: 521 YAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 555
+ ++ D +S GV++ ++G S ++T
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 363
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQE--------FKNEVVLV 396
+ + LG G GEV + +++A+K +S+ G + E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIA 455
KL H ++++ F + E+ +V E + L D + ++ Y+++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVG 512
YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 178
Query: 513 TYGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 555
T Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 369 SGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRLLGFCLEGEEKILVYEFVPNKS 428
S + +AVK + R + + K E++ L+H N+VR L +V E+
Sbjct: 43 SNELVAVKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 429 LDYFLYEPEKQQQLDWSRRY--KIIGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMN 486
L + + + D +R + ++I G++ Y H +++ HRDLK N LLD
Sbjct: 102 LFERICNAGRFSE-DEARFFFQQLISGVS----YCHA---MQVCHRDLKLENTLLDGSPA 153
Query: 487 P--KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPEYAMHGQFSVK-SDVYSFGVLVLEI 543
P KI FG +K V +Q + VGT Y+APE + ++ K +DV+S GV + +
Sbjct: 154 PRLKICAFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 544 ITG 546
+ G
Sbjct: 211 LVG 213
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 354 LGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ--------EFKNEVVLVAKLQHRNL 404
LG G GEV + +++A++ +S+ G + E+ ++ KL H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 405 VRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHE 463
+++ F + E+ +V E + L D + ++ Y+++ + YLHE
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHE 257
Query: 464 DSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVGTYGYMAPE 520
+ IIHRDLK N+LL ++ KI+DFG +KI G + GT Y+APE
Sbjct: 258 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPE 311
Query: 521 YAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 555
+ ++ D +S GV++ ++G S ++T
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 342 EVATNNFSTDNKLGEGGFGEVYKGVLPSGQ-EIAVKRLSRSSGQGGQEFKN------EVV 394
E + + LG GGFG VY G+ S +A+K + + E N EVV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 395 LVAKLQH--RNLVRLLGFCLEGEEKILVYEFV-PNKSL-DYFLYEPEKQQQLDWSRRYKI 450
L+ K+ ++RLL + + +L+ E + P + L D+ Q++L S +++
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 451 IGGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNP-KISDFGMAKIFGVDQTQGNTNR 509
+ + + H ++HRD+K NIL+D K+ DFG + D + +
Sbjct: 124 L----EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFD- 174
Query: 510 IVGTYGYMAPEYAMHGQFSVKS-DVYSFGVLVLEIITG 546
GT Y PE+ + ++ +S V+S G+L+ +++ G
Sbjct: 175 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 346 NNFSTDNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQ--------EFKNEVVLV 396
+ + LG G GEV + +++A+K +S+ G + E+ ++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 397 AKLQHRNLVRLLGFCLEGEEKILVYEFVPNKSL-DYFLYEPEKQQQLDWSRRYKIIGGIA 455
KL H ++++ F + E+ +V E + L D + ++ Y+++ +
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 456 RGILYLHEDSRLRIIHRDLKASNILLDAEMNP---KISDFGMAKIFGVDQTQGNTNRIVG 512
YLHE+ IIHRDLK N+LL ++ KI+DFG +KI G + G
Sbjct: 135 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 184
Query: 513 TYGYMAPEYAMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFYQT 555
T Y+APE + ++ D +S GV++ ++G S ++T
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 230
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 102/212 (48%), Gaps = 26/212 (12%)
Query: 354 LGEGGFGEVYKGVLPS-GQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQHRNLVRL----- 407
LG GG G V+ V + +A+K++ + Q + E+ ++ +L H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 408 ---------LGFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGI 458
+G E +V E++ + P ++ +R + + + RG+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEH---ARLF--MYQLLRGL 133
Query: 459 LYLHEDSRLRIIHRDLKASNILLDAE-MNPKISDFGMAKIFGVDQT-QGNTNRIVGTYGY 516
Y+H + ++HRDLK +N+ ++ E + KI DFG+A+I + +G+ + + T Y
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWY 190
Query: 517 MAPEYAMHGQFSVKS-DVYSFGVLVLEIITGK 547
+P + K+ D+++ G + E++TGK
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 23/212 (10%)
Query: 351 DNKLGEGGFGEVYKGV-LPSGQEIAVKRLSRSSGQGGQEFKNEVVLVAKLQ-HRNLVRLL 408
++ LGEG V + L + QE AVK + + G EV ++ + Q HRN++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 409 GFCLEGEEKILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLR 468
F E + LV+E + S+ +++ +L+ S ++ +A + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS---VVVQDVASALDFLHNKG--- 131
Query: 469 IIHRDLKASNILLDA--EMNP-KISDFGMA---KIFGVDQTQGNTNRIV---GTYGYMAP 519
I HRDLK NIL + +++P KI DF + K+ G D + +T ++ G+ YMAP
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG-DCSPISTPELLTPCGSAEYMAP 190
Query: 520 EY--AMHGQFSV---KSDVYSFGVLVLEIITG 546
E A + S+ + D++S GV++ +++G
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 354 LGEGGFGEVYKGVLPSGQEIAVKR--------LSRSSGQGGQEFKNEVVLVAKLQHRNLV 405
LGEG +G+V K VL S E +R R G K E+ L+ +L+H+N++
Sbjct: 13 LGEGSYGKV-KEVLDS--ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 406 RLLGFCLEGEEK---ILVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLH 462
+L+ L EEK +V E+ + PEK+ + + Y + G+ YLH
Sbjct: 70 QLVDV-LYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY--FCQLIDGLEYLH 126
Query: 463 EDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKI---FGVDQTQGNTNRIVGTYGYMAP 519
I+H+D+K N+LL KIS G+A+ F D T + G+ + P
Sbjct: 127 SQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ---GSPAFQPP 180
Query: 520 EYA--MHGQFSVKSDVYSFGVLVLEIITG 546
E A + K D++S GV + I TG
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 337 DFETIEVATNNFSTDNKLGEGGFGEVYKGVLPSGQEI-AVKRLSRSSGQGGQE---FKNE 392
DFE ++V +G G FGEV L + ++ A+K L++ E F+ E
Sbjct: 75 DFEILKV----------IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 393 VVLVAKLQHRNLVRLLGFCLEGEEKI-LVYEFVPNKSLDYFLYEPEKQQQLDWSRRYKII 451
++ + + L + + + + LV ++ L L + E + + +R Y
Sbjct: 125 RDVLVNGDSK-WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY--- 180
Query: 452 GGIARGILYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMAKIFGVDQTQGNTNRIV 511
+A ++ + +L +HRD+K NIL+D + +++DFG D T ++ V
Sbjct: 181 --LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAV 237
Query: 512 GTYGYMAPEY--AMH---GQFSVKSDVYSFGVLVLEIITGKKNSSFY 553
GT Y++PE AM G++ + D +S GV + E++ G+ + FY
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE--TPFY 282
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 324 ADNDITTLESLQFDFETIEVATNNFSTDNKLGEGGFGEVYKGVLP-SGQEIAVKRLSRSS 382
A ++ L++ FD T +V + + +G G +G V +GQ++A+K++ +
Sbjct: 35 AAKNLALLKARSFDV-TFDVG-DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF 92
Query: 383 G--QGGQEFKNEVVLVAKLQHRNLVRLLGFC------------------LEGEEKILVYE 422
+ E+ ++ +H N++ + +E + +++
Sbjct: 93 DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS 152
Query: 423 FVPN--KSLDYFLYEPEKQQQLDWSRRYKIIGGIARGILYLHEDSRLRIIHRDLKASNIL 480
P + + YFLY+ + RG+ Y+H ++IHRDLK SN+L
Sbjct: 153 SQPLTLEHVRYFLYQ------------------LLRGLKYMHS---AQVIHRDLKPSNLL 191
Query: 481 LDAEMNPKISDFGMAKIFGVDQTQGN--TNRIVGTYGYMAPE--YAMHGQFSVKSDVYSF 536
++ KI DFGMA+ + V T Y APE ++H +++ D++S
Sbjct: 192 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH-EYTQAIDLWSV 250
Query: 537 GVLVLEIITGKK 548
G + E++ ++
Sbjct: 251 GCIFGEMLARRQ 262
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,375,745
Number of Sequences: 62578
Number of extensions: 613646
Number of successful extensions: 4093
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 1431
Number of HSP's gapped (non-prelim): 1151
length of query: 573
length of database: 14,973,337
effective HSP length: 104
effective length of query: 469
effective length of database: 8,465,225
effective search space: 3970190525
effective search space used: 3970190525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)