BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008242
(573 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From
Arabidopsis Thaliana
Length = 541
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/541 (68%), Positives = 437/541 (80%), Gaps = 7/541 (1%)
Query: 38 STSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL 97
S S NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 98 INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDP 157
INW PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 158 YLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS 217
YLREW KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y S
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 218 KDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMG-PNT--KHVLKVSLDD 274
KDF+ W K+ PLH G+GMWECPDFFPV+ +G NG++TS G PN KHVLK+SLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 275 TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNE 334
TKH+YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 335 SSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSV 393
SSSV DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 394 IEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXS 453
+EV GVTAAQADVE+ F V D +KA+ ++P WT+PQL+CS+ SVK S
Sbjct: 361 LEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLAS 420
Query: 454 KDLKEYTAVFFRIFKGED--NKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSL 511
K+L+EYT+V+FRIFK NK+VVLMCSDQSRSSL DNDKTTYGAF++++P ++ LSL
Sbjct: 421 KNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSL 479
Query: 512 RSLIDHSIVESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQ 571
R+LIDHS+VESFG G+ACIT+RVYP LAI +HL+AFN G ++V + L+AWSM AQ
Sbjct: 480 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 539
Query: 572 L 572
+
Sbjct: 540 I 540
>pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|C Chain C, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|E Chain E, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|G Chain G, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|I Chain I, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|K Chain K, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
Length = 537
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/537 (68%), Positives = 435/537 (81%), Gaps = 7/537 (1%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDPYLRE
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMG-PNT--KHVLKVSLDDTKHE 278
W K+ PLH G+GMWECPDFFPV+ +G NG++TS G PN KHVLK+SLDDTKH+
Sbjct: 181 KWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSV 338
YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NESSSV
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSVIEVT 397
DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS +EV
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 398 GVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLK 457
GVTAAQADVE+ F V D +KA+ ++P WT+PQL+CS+ SVK SK+L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 458 EYTAVFFRIFKGED--NKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLI 515
EYT+V+FRIFK NK+VVLMCSDQSRSSL DNDKTTYGAF++++P ++ LSLR+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 516 DHSIVESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQL 572
DHS+VESFG G+ACIT+RVYP LAI +HL+AFN G ++V + L+AWSM AQ+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/537 (68%), Positives = 435/537 (81%), Gaps = 7/537 (1%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDPYLRE
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMG-PNT--KHVLKVSLDDTKHE 278
W K+ PLH G+GMW+CPDFFPV+ +G NG++TS G PN KHVLK+SLDDTKH+
Sbjct: 181 KWEKSPEPLHYDDGSGMWQCPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSV 338
YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NESSSV
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSVIEVT 397
DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS +EV
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 398 GVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLK 457
GVTAAQADVE+ F V D +KA+ ++P WT+PQL+CS+ SVK SK+L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 458 EYTAVFFRIFKGED--NKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLI 515
EYT+V+FRIFK NK+VVLMCSDQSRSSL DNDKTTYGAF++++P ++ LSLR+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 516 DHSIVESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQL 572
DHS+VESFG G+ACIT+RVYP LAI +HL+AFN G ++V + L+AWSM AQ+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/537 (68%), Positives = 434/537 (80%), Gaps = 7/537 (1%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDPYLRE
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMG-PNT--KHVLKVSLDDTKHE 278
W K+ PLH G+GMW CPDFFPV+ +G NG++TS G PN KHVLK+SLDDTKH+
Sbjct: 181 KWEKSPEPLHYDDGSGMWACPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSV 338
YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NESSSV
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSVIEVT 397
DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS +EV
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 398 GVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLK 457
GVTAAQADVE+ F V D +KA+ ++P WT+PQL+CS+ SVK SK+L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 458 EYTAVFFRIFKGED--NKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLI 515
EYT+V+FRIFK NK+VVLMCSDQSRSSL DNDKTTYGAF++++P ++ LSLR+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 516 DHSIVESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQL 572
DHS+VESFG G+ACIT+RVYP LAI +HL+AFN G ++V + L+AWSM AQ+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/537 (68%), Positives = 434/537 (80%), Gaps = 7/537 (1%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
NQPYRTG+HFQPPKNW+N PNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNAPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDPYLRE
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMG-PNT--KHVLKVSLDDTKHE 278
W K+ PLH G+GMWECPDFFPV+ +G NG++TS G PN KHVLK+SLDDTKH+
Sbjct: 181 KWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD 240
Query: 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSV 338
YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NESSSV
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSVIEVT 397
DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS +EV
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 398 GVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLK 457
GVTAAQADVE+ F V D +KA+ ++P WT+PQL+CS+ SVK SK+L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 458 EYTAVFFRIFKGED--NKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLI 515
EYT+V+FRIFK NK+VVLMCSDQSRSSL DNDKTTYGAF++++P ++ LSLR+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 516 DHSIVESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQL 572
DHS+VESFG G+ACIT+RVYP LAI +HL+AFN G ++V + L+AWSM AQ+
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQI 536
>pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 535
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/536 (68%), Positives = 433/536 (80%), Gaps = 7/536 (1%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD 60
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDPYLRE
Sbjct: 61 PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE 120
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y SKDF+
Sbjct: 121 WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL 180
Query: 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMG-PNT--KHVLKVSLDDTKHE 278
W K+ PLH G+GMWECPDFFPV+ +G NG++TS G PN KHVLK+SL DTKH+
Sbjct: 181 KWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLADTKHD 240
Query: 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSV 338
YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NESSSV
Sbjct: 241 YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV 300
Query: 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSVIEVT 397
DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS +EV
Sbjct: 301 EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY 360
Query: 398 GVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLK 457
GVTAAQADVE+ F V D +KA+ ++P WT+PQL+CS+ SVK SK+L+
Sbjct: 361 GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE 420
Query: 458 EYTAVFFRIFKGED--NKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLI 515
EYT+V+FRIFK NK+VVLMCSDQSRSSL DNDKTTYGAF++++P ++ LSLR+LI
Sbjct: 421 EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINP-HQPLSLRALI 479
Query: 516 DHSIVESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQ 571
DHS+VESFG G+ACIT+RVYP LAI +HL+AFN G ++V + L+AWSM AQ
Sbjct: 480 DHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 535
>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus
pdb|2ADD|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Sucrose
pdb|2ADE|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Fructose
pdb|2AEY|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With 2,5
Dideoxy-2,5-Immino-D-Mannitol
Length = 543
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/533 (55%), Positives = 392/533 (73%), Gaps = 7/533 (1%)
Query: 43 QPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWI 101
QPYRTGYHFQPP NW+NDPNG M+Y+G+YH FYQYNP A +G+ I+W H+ S DL+NWI
Sbjct: 5 QPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWI 64
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
DPAIYP+Q++D CWSGSATILPG PA+ YTG D +RQVQ+LA PKNLSDP+LRE
Sbjct: 65 HLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLRE 124
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
WVK PKNPL+ P + FRDP+TAWLGPD WR+++G + G+A LY+S DFV
Sbjct: 125 WVKHPKNPLITPP--EGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFV 182
Query: 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYT 281
+W + PL S TG WECPDF+PV NGLDTS G + +HV+K + H++YT
Sbjct: 183 NWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFE--GHDWYT 240
Query: 282 VGTYSTAKDRYVPDEGSVESDS--GLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVN 339
+GTYS ++ ++P G + S LR+DYG++YASK+FFD AKNRRVLW WV E+ S
Sbjct: 241 IGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQA 300
Query: 340 DDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGV 399
DD++KGWAG+Q+ PR LW+D++GK L+QWPV EIE+LR NQV + +K LK GSV+E+ G+
Sbjct: 301 DDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGI 360
Query: 400 TAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLKEY 459
A+QADV ISF + K+AE LD +PQ LC+++GAS + SKDLKE
Sbjct: 361 AASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQ 420
Query: 460 TAVFFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLIDHSI 519
+A+FFR+F+ + ++ VLMCSD SRS++ S+ D T+YGAF+++DP E++SLR+LIDHSI
Sbjct: 421 SAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSI 480
Query: 520 VESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQL 572
+ESFG GGK CIT+R+YP ++ AHL+ FNNGT+NVKI+ +SAWSMK A+
Sbjct: 481 IESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKF 533
>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
From Cichorium Intybus In Complex With 1-Kestose
Length = 543
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/533 (55%), Positives = 392/533 (73%), Gaps = 7/533 (1%)
Query: 43 QPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWI 101
QPYRTGYHFQPP NW+NDPNG M+Y+G+YH FYQYNP A +G+ I+W H+ S DL+NWI
Sbjct: 5 QPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWI 64
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
DPAIYP+Q++D CWSGSATILPG PA+ YTG D +RQVQ+LA PKNLSDP+LRE
Sbjct: 65 HLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLRE 124
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
WVK PKNPL+ P + FRDP+TAWLGPD WR+++G + G+A LY+S DFV
Sbjct: 125 WVKHPKNPLITPP--EGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFV 182
Query: 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYT 281
+W + PL S TG W+CPDF+PV NGLDTS G + +HV+K + H++YT
Sbjct: 183 NWKRYDQPLSSADATGTWQCPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFE--GHDWYT 240
Query: 282 VGTYSTAKDRYVPDEGSVESDS--GLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVN 339
+GTYS ++ ++P G + S LR+DYG++YASK+FFD AKNRRVLW WV E+ S
Sbjct: 241 IGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQA 300
Query: 340 DDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGV 399
DD++KGWAG+Q+ PR LW+D++GK L+QWPV EIE+LR NQV + +K LK GSV+E+ G+
Sbjct: 301 DDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGI 360
Query: 400 TAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLKEY 459
A+QADV ISF + K+AE LD +PQ LC+++GAS + SKDLKE
Sbjct: 361 AASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQ 420
Query: 460 TAVFFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLIDHSI 519
+A+FFR+F+ + ++ VLMCSD SRS++ S+ D T+YGAF+++DP E++SLR+LIDHSI
Sbjct: 421 SAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSI 480
Query: 520 VESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKAQL 572
+ESFG GGK CIT+R+YP ++ AHL+ FNNGT+NVKI+ +SAWSMK A+
Sbjct: 481 IESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKF 533
>pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGF|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGG|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGG|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGH|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
pdb|3UGH|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
Length = 546
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/530 (42%), Positives = 311/530 (58%), Gaps = 14/530 (2%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP 105
RT +HFQP ++W++DP+G + YKG YH FYQYNP VWGN W H+ S+DLI+W+
Sbjct: 19 RTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPL 78
Query: 106 AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS 165
A+ Q D+ G +SGSAT LP + + YTG+ ++ +LA P +LSDP L EWVK
Sbjct: 79 ALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKY 138
Query: 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIK 225
P NP+++ A ++ + FRD +T W + WR+ IG+K N G+A++Y +KDF +
Sbjct: 139 PGNPILS--APPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKDFKSFKL 196
Query: 226 AKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTY 285
+ LH+V TG+WEC D +PVST G GL+TS GP KHVLK S+D+ + +YY +GTY
Sbjct: 197 LEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIGTY 256
Query: 286 STAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKG 345
+++ PD + GLR+D+GKYYASKTF+D K RRV+W W E S D +KG
Sbjct: 257 DLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKG 316
Query: 346 WAGIQAIPRKLWLD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQA 404
WA +Q IPR + LD K+G +++ WPV E+E LR++ + GSV+ + TA Q
Sbjct: 317 WANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQL 376
Query: 405 DV--EISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLKEYTAV 462
D+ E D + + D G+ + GA+ + +++L E T V
Sbjct: 377 DIIAEFEIDKEALEGTIEADMGYN----CTTSGGAAERGVLGPFGLLVSATENLSEQTPV 432
Query: 463 FFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVY--EKLSLRSLIDHSIV 520
+F I KG D F C D+SRSS SD K G + PV EK ++R L+DHSIV
Sbjct: 433 YFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTV---PVLDGEKFTMRLLVDHSIV 489
Query: 521 ESFGVGGKACITARVYPTLAIDDYAHLYAFNNGTENVKINGLSAWSMKKA 570
ESF GG++CIT+RVYPT AI A L+ FNN T L W M A
Sbjct: 490 ESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSA 539
>pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|B Chain B, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|C Chain C, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|D Chain D, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|E Chain E, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|F Chain F, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
Length = 432
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 172/345 (49%), Gaps = 48/345 (13%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
++ YHF P W+NDPNG++ +KG YH+FYQYNP+ WGNI W H+ S DL++W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 105 PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP-HN---RQVQNLAVPKNLSDPYLR 160
A+YP ++ +G +SGSA G+ ++ DP HN ++ Q + + +N D
Sbjct: 62 VALYPDDET--HGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLD---- 115
Query: 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK-GLAILYRSKD 219
+VK NP+++ + T +FRDP + WR+++GS + K G +LY S D
Sbjct: 116 -FVKYDGNPVISKPP--EEGTHAFRDPKVN--RSNGEWRMVLGSGKDEKIGRVLLYTSDD 170
Query: 220 FVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279
HW K + + + T ECPD + K +L S+ T
Sbjct: 171 LFHW-KYEGAIFEDETTKEIECPDLVRIG---------------EKDILIYSITSTNSVL 214
Query: 280 YTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNE--SS 336
+++G EG + + D+G +YA++TFF +R V+ GW+ +
Sbjct: 215 FSMGELK---------EGKLNVEKRGLLDHGTDFYAAQTFF--GTDRVVVIGWLQSWLRT 263
Query: 337 SVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381
+ ++GW G+ ++PR+L+++ + L PV E+ LR +V
Sbjct: 264 GLYPTKREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKV 306
>pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|B Chain B, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|C Chain C, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|D Chain D, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|E Chain E, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|F Chain F, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
Length = 432
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 48/345 (13%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
++ YHF P W+NDPNG++ +KG YH+FYQYNP+ WGNI W H+ S DL++W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 105 PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP-HN---RQVQNLAVPKNLSDPYLR 160
A+YP ++ +G +SGSA G+ ++ DP HN ++ Q + + +N D
Sbjct: 62 VALYPDDET--HGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLD---- 115
Query: 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK-GLAILYRSKD 219
+VK NP+++ + T +FRDP + WR+++GS + K G +LY S D
Sbjct: 116 -FVKYDGNPVISKPP--EEGTHAFRDPKVN--RSNGEWRMVLGSGKDEKIGRVLLYTSDD 170
Query: 220 FVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279
HW K + + + T +CPD + K +L S+ T
Sbjct: 171 LFHW-KYEGAIFEDETTKEIDCPDLVRIG---------------EKDILIYSITSTNSVL 214
Query: 280 YTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNE--SS 336
+++G EG + + D+G +YA++TFF +R V+ GW+ +
Sbjct: 215 FSMGELK---------EGKLNVEKRGLLDHGTDFYAAQTFF--GTDRVVVIGWLQSWLRT 263
Query: 337 SVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381
+ ++GW G+ ++PR+L+++ + L PV E+ LR +V
Sbjct: 264 GLYPTKREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKV 306
>pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIG|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIJ|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
pdb|3PIJ|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
Length = 526
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 213/511 (41%), Gaps = 87/511 (17%)
Query: 49 YHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY 108
YH WINDPNG+ YKG +H+FYQ +P G WG + W H +S D++NW
Sbjct: 43 YHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFA 102
Query: 109 PSQQSDINGCWSGSATILPGEKPAIFYTG---IDPHNR-----QVQNLAVPKNLSDPYLR 160
PS + + +G +SGSA I +YTG + H+ QVQ A+P N
Sbjct: 103 PSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDN------D 156
Query: 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDF 220
E + K ++ ++++ +RDP W D + S +++G L+ SKD
Sbjct: 157 ELTSATKQGMIIDCPTDKVD-HHYRDPKV-WKTGDTWYMTFGVSSADKRGQMWLFSSKDM 214
Query: 221 VHW----IKAKHPLHSVKGTGMWECPDFFPVSTYGLNG---LDTSDMGPNTKHVLKVSLD 273
V W + +HP V M ECPDF P+ N + S MG + ++
Sbjct: 215 VRWEYERVLFQHPDPDVF---MLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVS 271
Query: 274 DTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRF-DYG-KYYASKTFFDGAKNRRVLWGW 331
+ Y +GT+ G + ++ R D G YYA ++F R++++GW
Sbjct: 272 NAG---YMIGTWEPG--------GEFKPETEFRLWDCGHNYYAPQSF--NVDGRQIVYGW 318
Query: 332 VN---ESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLL 388
++ + + DD GW G +PR++ L G +V PV E+E LR + + S L
Sbjct: 319 MSPFVQPIPMEDD---GWCGQLTLPREITLGDDGD-VVTAPVAEMEGLREDTLDHGSVTL 374
Query: 389 K-GGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKXXXXXXX 447
G I A + ++ I S ++A ++ ++ GA
Sbjct: 375 DMDGEQIIADDAEAVEIEMTIDLAASTAERA--------GLKIHATEDGA---------- 416
Query: 448 XXXXXSKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTTYGAFLNVDPVYE 507
YT V + G+ + VV R ++ + + + +
Sbjct: 417 -----------YTYV---AYDGQIGRVVV------DRQAMANGDRGYRAAPLTDAELASG 456
Query: 508 KLSLRSLIDHSIVESFGVGGKACITARVYPT 538
KL LR +D VE + GG +++ Y +
Sbjct: 457 KLDLRVFVDRGSVEVYVNGGHQVLSSYSYAS 487
>pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P212121
pdb|1Y9G|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori Complexed With Fructose
pdb|1Y4W|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P21
Length = 518
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 224/558 (40%), Gaps = 91/558 (16%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
+QPYR YHF P KNW+NDPNG++ + G YHLF+QYNP G WGNI W H+ S+DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 102 PHDPAIYPSQ-QSDINGCW-SGSATI---------LPGEKPAI-FYTGIDP--------- 140
A+ SD+ + SGSA G+ P + YT P
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 141 ---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA-PDAMNQINTSSFRDPTTAWLGPDK 196
++Q Q++A D L NP++ P + + +FRDP W +
Sbjct: 124 TVQEDQQSQSIAYSL---DDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 197 RWRVIIGSKINRKGLAILYRSKDFVHW-IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGL 255
+W V++ S LAI Y S + W + ++ ++ +G G+WECP GL L
Sbjct: 181 KW-VVVTSIAELHKLAI-YTSDNLKDWKLVSEFGPYNAQG-GVWECP--------GLVKL 229
Query: 256 DTSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLR-- 306
D G +TK V+ L+ Y VG + + PD +V +
Sbjct: 230 PL-DSGNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTT--FTPDADTVYPGNSTANW 286
Query: 307 FDYG-KYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKH- 364
D+G +YA+ + + N V GW+N + W AIPR + L G
Sbjct: 287 MDWGPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKA 346
Query: 365 -LVQWPVVEIEKLRVNQVQVPSKLLKG-GSVIEVTGVTAAQADVEISFDVSDFKKAEKLD 422
LVQ P + N+ + S+ K T T V++SF
Sbjct: 347 TLVQQPQEAWSSIS-NKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSF------------ 393
Query: 423 PGWTNPQLLCSQKGASVKXXXXXXXXXXXXSKDLKEYTAVFFRIFKGEDNKFVVLMCSDQ 482
S K S + E T V + K + + L +
Sbjct: 394 ---------------SAKSKASTFAIALRASANFTEQTLVGYDFAKQQ----IFLDRTHS 434
Query: 483 SRSSLNSDNDKTTYGAFLNVDPVYEKLSLRSLIDHSIVESFGVGGKACITARVYPTLAID 542
S + +G KLS+ +D S VE FG G+ +TA+++P+ +
Sbjct: 435 GDVSFDETFASVYHGPLTPDSTGVVKLSI--FVDRSSVEVFGGQGETTLTAQIFPS-SDA 491
Query: 543 DYAHLYAFNNGTENVKIN 560
+A L + TE+V+ +
Sbjct: 492 VHARLASTGGTTEDVRAD 509
>pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes.
pdb|3RWK|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes
Length = 516
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 206/530 (38%), Gaps = 91/530 (17%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
YR YHF P + W+N+PNG++ +HLF+Q+NP VWGNI W H+TS DL++W
Sbjct: 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHW---- 83
Query: 105 PAIYPSQQSDING--CWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYL--- 159
A P+ +D NG ++G+A P + + P+ D L
Sbjct: 84 -AHKPTAIADENGVEAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFS 142
Query: 160 ----REWVKSPKNPLMAP--DAMNQINTS-SFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212
W K NP+++ +A + I RDP + W +++ K
Sbjct: 143 VDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVLAHGGQDK--L 200
Query: 213 ILYRSKDFVHWIKAKHPLHSVKGTGM------WECPDFFPVSTYG---------LNGLDT 257
+ S D ++W + L S G+ WE PD F + G + +
Sbjct: 201 SFWTSADTINW-TWQSDLKSTSINGLSSDITGWEVPDMFELPVEGTEETTWVVMMTPAEG 259
Query: 258 SDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKT 317
S G N + S D V D ++ D+G FD + +
Sbjct: 260 SPAGGNGVLAITGSFDGKSFTADPV------------DASTMWLDNGRDFDGALSWVNVP 307
Query: 318 FFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG--KHLVQWPVVEIEK 375
DG RR++ +N S + W G+ + PR L L K G +H VQ P+ E++
Sbjct: 308 ASDG---RRIIAAVMNSYGS--NPPTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDT 362
Query: 376 LRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQK 435
+ + + ++ + G + ++ + DV ++F + A + L +K
Sbjct: 363 ISTSLQILANQTITPGQTL-LSSIRGTALDVRVAF----YPDAGSV-------LSLAVRK 410
Query: 436 GASVKXXXXXXXXXXXXSKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSSLNSDNDKTT 495
GAS + S D E + + G + + L D
Sbjct: 411 GASEQTVIKYTQSDATLSVDRTESGDISYDPAAGGVHT-----------AKLEED----- 454
Query: 496 YGAFLNVDPVYEKLSLRSLIDHSIVESFGVGGKACITARVYPTLAIDDYA 545
G L +S+R L+D VE FG G+A I+ ++P+ + D A
Sbjct: 455 -GTGL--------VSIRVLVDTCSVEVFGGQGEAVISDLIFPSDSSDGLA 495
>pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
pdb|3KF3|B Chain B, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
Length = 509
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 56/296 (18%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKG--IYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIP 102
R HF P K W+NDPNG+ K ++HL++QYNP WG + W H+TS DL++W
Sbjct: 10 RPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDE 69
Query: 103 HDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNR------------QVQNLAV 150
H+ AI P + D G +SGS + F + IDP+ R Q Q++A
Sbjct: 70 HEIAIGP--EHDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQTQDIAF 127
Query: 151 PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210
+L Y + K NP++ ++++ FRDP W +W +++ SK
Sbjct: 128 --SLDGGY--TFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQEYK 176
Query: 211 LAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKV 270
+ I + S + +W+ + G +ECP V ++ SD +K V+ +
Sbjct: 177 IQI-FGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVP------IENSD---KSKWVMFL 225
Query: 271 SLD------DTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRF-DYGK-YYASKTF 318
+++ + ++Y+ VG + ++VPD DS RF D GK +YA +TF
Sbjct: 226 AINPGSPLGGSINQYF-VGDFDGF--QFVPD------DSQTRFVDIGKDFYAFQTF 272
>pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis
pdb|3KF5|B Chain B, Structure Of Invertase From Schwanniomyces Occidentalis
Length = 512
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 56/296 (18%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKG--IYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIP 102
R HF P K W+NDPNG+ K ++HL++QYNP WG + W H+TS DL++W
Sbjct: 13 RPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDE 72
Query: 103 HDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNR------------QVQNLAV 150
H+ AI P + D G +SGS + F + IDP+ R Q Q++A
Sbjct: 73 HEIAIGP--EHDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQTQDIAF 130
Query: 151 PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210
+L Y + K NP++ ++++ FRDP W +W +++ SK
Sbjct: 131 --SLDGGY--TFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQEYK 179
Query: 211 LAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKV 270
+ I + S + +W+ + G +ECP V ++ SD +K V+ +
Sbjct: 180 IQI-FGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVP------IENSD---KSKWVMFL 228
Query: 271 SLD------DTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRF-DYGK-YYASKTF 318
+++ + ++Y+ VG + ++VPD DS RF D GK +YA +TF
Sbjct: 229 AINPGSPLGGSINQYF-VGDFDGF--QFVPD------DSQTRFVDIGKDFYAFQTF 275
>pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|B Chain B, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|C Chain C, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|D Chain D, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
Length = 535
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 56/296 (18%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKG--IYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIP 102
R HF P K W+NDPNG+ K ++HL++QYNP WG + W H+TS DL++W
Sbjct: 36 RPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDE 95
Query: 103 HDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNR------------QVQNLAV 150
H+ AI P + D G +SGS + F + IDP+ R Q Q++A
Sbjct: 96 HEIAIGP--EHDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQTQDIAF 153
Query: 151 PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210
+L Y + K NP++ ++++ FRDP W +W +++ SK
Sbjct: 154 --SLDGGY--TFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQEYK 202
Query: 211 LAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKV 270
+ I + S + +W+ + G + CP V ++ SD +K V+ +
Sbjct: 203 IQI-FGSANLKNWVLNSNFSSGYYG-NQYACPGLIEVP------IENSD---KSKWVMFL 251
Query: 271 SLD------DTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRF-DYGK-YYASKTF 318
+++ + ++Y+ VG + ++VPD DS RF D GK +YA +TF
Sbjct: 252 AINPGSPLGGSINQYF-VGDFDGF--QFVPD------DSQTRFVDIGKDFYAFQTF 298
>pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
pdb|3U14|B Chain B, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
Length = 535
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 56/296 (18%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKG--IYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIP 102
R HF P K W+N PNG+ K ++HL++QYNP WG + W H+TS DL++W
Sbjct: 36 RPLIHFTPEKGWMNAPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDE 95
Query: 103 HDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNR------------QVQNLAV 150
H+ AI P + D G +SGS + F + IDP+ R Q Q++A
Sbjct: 96 HEIAIGP--EHDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDNQTQDIAF 153
Query: 151 PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210
+L Y + K NP++ ++++ FRDP W +W +++ SK
Sbjct: 154 --SLDGGY--TFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQW-IMVVSKSQEYK 202
Query: 211 LAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKV 270
+ I + S + +W+ + G +ECP V ++ SD +K V+ +
Sbjct: 203 IQI-FGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVP------IENSD---KSKWVMFL 251
Query: 271 SLD------DTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRF-DYGK-YYASKTF 318
+++ + ++Y+ VG + ++VPD DS RF D GK +YA +TF
Sbjct: 252 AINPGSPLGGSINQYF-VGDFDGF--QFVPD------DSQTRFVDIGKDFYAFQTF 298
>pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
Length = 490
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 158/398 (39%), Gaps = 67/398 (16%)
Query: 49 YHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY 108
YH PP W+ DP + G Y L+Y ++ + G W H+++ D + + H +
Sbjct: 4 YHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNN--GPGGWDHASTTDGVAFTHHGTVM- 60
Query: 109 PSQQSDINGCWSGSATILPGEKP-----AIFYTGIDPHN----RQVQNLAVPKN------ 153
+ D WSGSA + A+ P + Q Q L +
Sbjct: 61 -PLRPDFP-VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFT 118
Query: 154 -LSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212
L DP + V + P + N FRDP W W +IG R A
Sbjct: 119 ALPDPVI---VNTDGRAATTPAEIE--NAEWFRDPKIHWDTARGEWVCVIG----RLRYA 169
Query: 213 ILYRSKDFVHWIKAK---HPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKH-VL 268
Y S + W + +P H++ G ECPD F + T+D G T+H VL
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGI---ECPDLFEI---------TADDG--TRHWVL 215
Query: 269 KVSLDDTKHEYYTVG---TYSTAKDRYVPDEGSVESDSGLRFDYG-KYYASKTF--FDGA 322
S+D Y +G TY+ + ++ + + D+G +YA+ T+ D
Sbjct: 216 AASMD-----AYGIGLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAP 270
Query: 323 KNRRVLWGWVNE----SSSVNDDVKKGWAGIQAIPRKLWLDKSGK---HLVQWPVVEIEK 375
+ +R+ W+N + V D G+ G +I R+L L + L+ PV +
Sbjct: 271 ETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTN 330
Query: 376 LRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVS 413
+P + + G +V+ G A + +++I++D +
Sbjct: 331 YVTATTTLPDRTVDGSAVLPWNG-RAYEIELDIAWDTA 367
>pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
Length = 492
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 158/398 (39%), Gaps = 67/398 (16%)
Query: 49 YHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY 108
YH PP W+ DP + G Y L+Y ++ + G W H+++ D + + H +
Sbjct: 4 YHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNN--GPGGWDHASTTDGVAFTHHGTVM- 60
Query: 109 PSQQSDINGCWSGSATILPGEKP-----AIFYTGIDPHN----RQVQNLAVPKN------ 153
+ D WSGSA + A+ P + Q Q L +
Sbjct: 61 -PLRPDFP-VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFT 118
Query: 154 -LSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212
L DP + V + P + N FRDP W W +IG R A
Sbjct: 119 ALPDPVI---VNTDGRAATTPAEIE--NAEWFRDPKIHWDTARGEWVCVIG----RLRYA 169
Query: 213 ILYRSKDFVHWIKAK---HPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKH-VL 268
Y S + W + +P H++ G ECPD F + T+D G T+H VL
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGI---ECPDLFEI---------TADDG--TRHWVL 215
Query: 269 KVSLDDTKHEYYTVG---TYSTAKDRYVPDEGSVESDSGLRFDYG-KYYASKTF--FDGA 322
S+D Y +G TY+ + ++ + + D+G +YA+ T+ D
Sbjct: 216 AASMDA-----YGIGLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAP 270
Query: 323 KNRRVLWGWVNE----SSSVNDDVKKGWAGIQAIPRKLWLDKSGK---HLVQWPVVEIEK 375
+ +R+ W+N + V D G+ G +I R+L L + L+ PV +
Sbjct: 271 ETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTN 330
Query: 376 LRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVS 413
+P + + G +V+ G A + +++I++D +
Sbjct: 331 YVTATTTLPDRTVDGSAVLPWNG-RAYEIELDIAWDTA 367
>pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFI|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
Length = 492
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 158/398 (39%), Gaps = 67/398 (16%)
Query: 49 YHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY 108
YH PP W+ +P + G Y L+Y ++ + G W H+++ D + + H +
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNN--GPGGWDHASTTDGVAFTHHGTVM- 60
Query: 109 PSQQSDINGCWSGSATILPGEKP-----AIFYTGIDPHN----RQVQNLAVPKN------ 153
+ D WSGSA + A+ P + Q Q L +
Sbjct: 61 -PLRPDFP-VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFT 118
Query: 154 -LSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212
L DP + V + P + N FRDP W W +IG R A
Sbjct: 119 ALPDPVI---VNTDGRAATTPAEIE--NAEWFRDPKIHWDTARGEWVCVIG----RLRYA 169
Query: 213 ILYRSKDFVHWIKAK---HPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKH-VL 268
Y S + W + +P H++ G ECPD F + T+D G T+H VL
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGI---ECPDLFEI---------TADDG--TRHWVL 215
Query: 269 KVSLDDTKHEYYTVG---TYSTAKDRYVPDEGSVESDSGLRFDYG-KYYASKTF--FDGA 322
S+D Y +G TY+ + ++ + + D+G +YA+ T+ D
Sbjct: 216 AASMDA-----YGIGLPMTYAYWTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAP 270
Query: 323 KNRRVLWGWVNE----SSSVNDDVKKGWAGIQAIPRKLWLDKSGK---HLVQWPVVEIEK 375
+ +R+ W+N + V D G+ G +I R+L L + L+ PV +
Sbjct: 271 ETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTN 330
Query: 376 LRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVS 413
+P + + G +V+ G A + +++I++D +
Sbjct: 331 YVTATTTLPDRTVDGSAVLPWNG-RAYEIELDIAWDTA 367
>pdb|3R4Y|A Chain A, Crystal Structure Of Alpha-Neoagarobiose Hydrolase
(Alpha-Nabh) From Saccharophagus Degradans 2-40
pdb|3R4Y|B Chain B, Crystal Structure Of Alpha-Neoagarobiose Hydrolase
(Alpha-Nabh) From Saccharophagus Degradans 2-40
pdb|3R4Z|A Chain A, Crystal Structure Of Alpha-Neoagarobiose Hydrolase
(Alpha-Nabh) In Complex With Alpha-D-Galactopyranose
From Saccharophagus Degradans 2- 40
pdb|3R4Z|B Chain B, Crystal Structure Of Alpha-Neoagarobiose Hydrolase
(Alpha-Nabh) In Complex With Alpha-D-Galactopyranose
From Saccharophagus Degradans 2- 40
Length = 374
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 60 DPNGVMIYKGIYHLFYQY-----------NPKGAV--WGNIVWAHSTSKDLINWIPHDPA 106
DP+ V+ YH++Y NP+ V W H+TSKD I W PA
Sbjct: 52 DPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIGPA 111
Query: 107 IYPSQQSDINGCWSGSATILP------GEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYL 159
I Q G + A P G ++ T P+ NR ++++A+ SD
Sbjct: 112 I----QRGAAGAYDDRAVFTPEVLRHNGTYYLVYQTVKAPYLNRSLEHIAIA--YSDSPF 165
Query: 160 REWVKSPKNPLMAPD 174
W KS P+++P+
Sbjct: 166 GPWTKS-DAPILSPE 179
>pdb|3OM5|A Chain A, Crystal Structure Of B. Megaterium Levansucrase Mutant
N252a
pdb|3OM5|B Chain B, Crystal Structure Of B. Megaterium Levansucrase Mutant
N252a
pdb|3OM5|C Chain C, Crystal Structure Of B. Megaterium Levansucrase Mutant
N252a
pdb|3OM5|D Chain D, Crystal Structure Of B. Megaterium Levansucrase Mutant
N252a
Length = 456
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 72 HLFYQYNPKGAV--WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129
+LFY+ ++ W N A KD ++P+DP + Q WSGS T+
Sbjct: 103 YLFYKKAGDKSIDSWKN---AGRVFKDSDKFVPNDPHLKNQTQE-----WSGSGTLTKDG 154
Query: 130 KPAIFYTGIDPHNRQVQNLAVPK-NLSDP 157
K +FYT Q L + N+S P
Sbjct: 155 KVRLFYTDYSGKQYGKQTLTTAQVNMSQP 183
>pdb|3OM6|A Chain A, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247a
pdb|3OM6|B Chain B, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247a
pdb|3OM6|C Chain C, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247a
pdb|3OM6|D Chain D, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247a
Length = 456
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 72 HLFYQYNPKGAV--WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129
+LFY+ ++ W N A KD ++P+DP + Q WSGS T+
Sbjct: 103 YLFYKKAGDKSIDSWKN---AGRVFKDSDKFVPNDPHLKNQTQE-----WSGSGTLTKDG 154
Query: 130 KPAIFYTGIDPHNRQVQNLAVPK-NLSDP 157
K +FYT Q L + N+S P
Sbjct: 155 KVRLFYTDYSGKQYGKQTLTTAQVNMSQP 183
>pdb|3OM2|A Chain A, Crystal Structure Of B. Megaterium Levansucrase Mutant
D257a
Length = 456
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 72 HLFYQYNPKGAV--WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129
+LFY+ ++ W N A KD ++P+DP + Q WSGS T+
Sbjct: 103 YLFYKKAGDKSIDSWKN---AGRVFKDSDKFVPNDPHLKNQTQE-----WSGSGTLTKDG 154
Query: 130 KPAIFYTGIDPHNRQVQNLAVPK-NLSDP 157
K +FYT Q L + N+S P
Sbjct: 155 KVRLFYTDYSGKQYGKQTLTTAQVNMSQP 183
>pdb|3OM7|C Chain C, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247w
pdb|3OM7|A Chain A, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247w
pdb|3OM7|B Chain B, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247w
pdb|3OM7|D Chain D, Crystal Structure Of B. Megaterium Levansucrase Mutant
Y247w
Length = 456
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 72 HLFYQYNPKGAV--WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129
+LFY+ ++ W N A KD ++P+DP + Q WSGS T+
Sbjct: 103 YLFYKKAGDKSIDSWKN---AGRVFKDSDKFVPNDPHLKNQTQE-----WSGSGTLTKDG 154
Query: 130 KPAIFYTGIDPHNRQVQNLAVPK-NLSDP 157
K +FYT Q L + N+S P
Sbjct: 155 KVRLFYTDYSGKQYGKQTLTTAQVNMSQP 183
>pdb|3OM4|A Chain A, Crystal Structure Of B. Megaterium Levansucrase Mutant
K373a
pdb|3OM4|B Chain B, Crystal Structure Of B. Megaterium Levansucrase Mutant
K373a
pdb|3OM4|C Chain C, Crystal Structure Of B. Megaterium Levansucrase Mutant
K373a
pdb|3OM4|D Chain D, Crystal Structure Of B. Megaterium Levansucrase Mutant
K373a
Length = 456
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 72 HLFYQYNPKGAV--WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129
+LFY+ ++ W N A KD ++P+DP + Q WSGS T+
Sbjct: 103 YLFYKKAGDKSIDSWKN---AGRVFKDSDKFVPNDPHLKNQTQE-----WSGSGTLTKDG 154
Query: 130 KPAIFYTGIDPHNRQVQNLAVPK-NLSDP 157
K +FYT Q L + N+S P
Sbjct: 155 KVRLFYTDYSGKQYGKQTLTTAQVNMSQP 183
>pdb|1IIR|A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb
Length = 415
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 100 WIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131
W+ DP + P Q +D++ +G A ILP E+P
Sbjct: 195 WVAADPVLAPLQPTDLDAVQTG-AWILPDERP 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,408,586
Number of Sequences: 62578
Number of extensions: 810032
Number of successful extensions: 1793
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1698
Number of HSP's gapped (non-prelim): 41
length of query: 573
length of database: 14,973,337
effective HSP length: 104
effective length of query: 469
effective length of database: 8,465,225
effective search space: 3970190525
effective search space used: 3970190525
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)