BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008249
(572 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L6Y3|PP396_ARATH Pentatricopeptide repeat-containing protein At5g24830
OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1
Length = 593
Score = 586 bits (1510), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/583 (51%), Positives = 402/583 (68%), Gaps = 17/583 (2%)
Query: 1 MALFIACGESSSPVHIQILRFLYQTFDSIKLNVAR----IFSNSRTCSDDDNLPCTLNDI 56
MAL I+CGE +S + R L Q+ D + NV+R IF+N R + L C +
Sbjct: 1 MALLISCGEVTSS-QFTVFRLLNQSLDFVSDNVSRLLAPIFTNLR--DFEMRLSC-IERP 56
Query: 57 MSYVGDQCRSKTRHWFSN-KDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLE 115
S G+ T WFS+ KD D + +P+A+FN LD ILK +LDRL ++R++ V T
Sbjct: 57 PSISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRES--VCQTKS 114
Query: 116 TDY----RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
DY H +++RDLCL GK+ ALWLR+KMI G +P ++THN+L+N LCK G +EK
Sbjct: 115 FDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEK 174
Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
AD ++REM EM PSPNC +YN I G C VN +DKAL+LF+TM GIRPNRVT NI+VH
Sbjct: 175 ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 234
Query: 232 ALCKKGLLGDA-VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
ALC+KG++G+ K L E+L A D++ TILMDS FKNG+ QAL +W +M QK
Sbjct: 235 ALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
N+ D V YNV+I G C +G++ +A+ + C M+KRG PDV TYNTL++ LCK+GK DEA
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
+G + GVAPDQISYK IIQGLCIHGD+ +A EFLLSML+ S++PE +WNV+IDG
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
YGR GD S+A S+ +LMLS+GV NV+T NALI +GG + DA+ +K EM I PD
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
TYNLL+GA+C LGH+ LA QLYDEMLRRG PDIITYTEL++G C +G +K+AE + +
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL-LRNK 572
+IQ G+ IDH+PF IL K+Y R++ +A +++KWL RN+
Sbjct: 535 RIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNR 577
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 232/440 (52%), Gaps = 3/440 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
VI +C G+I A L M KG PDV++++ +VN C+ G+L+K +I M
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN Y + I CR+ +L +A FS M GI P+ V + L+ CK+G + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
KF E+ + D T DV+T T ++ + + GD +A L+++MF K ++ D V + LI
Sbjct: 372 KFFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NG+C G + AF M++ G P+V+TY TL++ LCK+G LD A+ + K G+
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P+ +Y +I+ GLC G+I +A + + + + + ++D Y + G++ A I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
ML G+ + TFN L+ G + D L ML GI P+ T+N L+ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
++ A +Y +M RG+ PD TY L+KGHC NMKEA +F +++ G ++
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 544 FRILKKRYRRMKESDKARDI 563
+ +L K + + K+ +AR++
Sbjct: 669 YSVLIKGFLKRKKFLEAREV 688
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 227/437 (51%), Gaps = 9/437 (2%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K TA+ + R+ + G +V ++N +++ +C++G +++A H++ M +P+ +Y+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
+ GYCR ELDK L M G++PN + ++ LC+ L +A + E++
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
D + T L+D + K GD A + +M ++I D++ Y +I+GFC GD+
Sbjct: 346 G---ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F +M +G PD +T+ L+N CK G + +A + + + G +P+ ++Y T+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I GLC GD+ A E L M + + P +N I++G + G++ A + + G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
+++ T+ L+ A + G + A + KEML G+ P + T+N+L+ C G + +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
L + ML +GI P+ T+ L+K +C R N+K A ++ + + G+ D + L
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL----- 637
Query: 553 RMKESDKARDIHQKWLL 569
+K KAR++ + W L
Sbjct: 638 -VKGHCKARNMKEAWFL 653
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 217/444 (48%), Gaps = 20/444 (4%)
Query: 121 HVAVI-RDLCLGGKIGTALWLRRKM-IQKGTVP--DVLTHNY------------LVNELC 164
H+AV +DL + + ++ W R K+ + V D+L + Y L
Sbjct: 127 HLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLV 186
Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNR 223
G L +A V +M + + N ++T + + A+ +F G+ N
Sbjct: 187 DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNV 246
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
++NI++H +C+ G + +A L +L + G T DVI+ + +++ Y + G+ + L
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLL--LLMELKG-YTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
M +K ++ + Y +I C ++ A F +M+++G LPD + Y TL++ CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
+G + AS F+ + + PD ++Y II G C GD+V+A + M K + P+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
+ +I+GY + G + +AF + + M+ G S NV T+ LI + G + A L EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
G+ P++FTYN ++ C G+I A++L E G+ D +TYT L+ +C G M
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
+A+E+ ++ GL + F +L
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVL 567
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 38/327 (11%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
LE D +I C G + A + MIQ G P+V+T+ L++ LCK GDL+ A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ EM ++ PN TYN+ + G C+ +++A+ L G+ + VT+ L+ A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK G + A + L E+L K +Q
Sbjct: 537 CKSGEMDKAQEILKEMLG--------------------------------------KGLQ 558
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
IV +NVL+NGFCL+G + ML +G P+ T+N+L+ C + L A+
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
Y + GV PD +Y+ +++G C ++ +A M K ++V+I G+ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFN 440
A + D M G++++ F+
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFD 705
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 219/418 (52%), Gaps = 3/418 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I L L K A+ L +M+ KG PD++T+ +VN LCK GD + A +++ +M +
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ P YN I G C+ +D AL+LF M GIRPN VT++ L+ LC G DA
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +++ + K DV T + L+D++ K G +A L+++M +++I IV Y+ L
Sbjct: 311 SRLLSDMI---ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
INGFC++ + A F M+ + PDV+TYNTL+ CK +++E + +S+ G+
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
+ ++Y +IQGL GD A+E M+ V P +N ++DG + G L A
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ + + + ++T+N +I + G + D + L + L G+ PDV YN +I C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
G A L+ EM G P+ Y LI+ G+ + + E+ ++++ G A D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 3/437 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C ++ AL + KM++ G P+++T + L+N C + +A ++ +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN T+N I G N+ +A+ L M G +P+ VT+ ++V+ LCK+G A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ + GK V+ ++D K AL L+ +M K I+ ++V Y+ LI
Sbjct: 242 NLLNKM---EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C G S A M++R PDV T++ L++ K+GKL EA Y + K +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P ++Y ++I G C+H + +A++ M+ K P+ +N +I G+ + + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M G+ N T+N LI + G A + KEM+ DG+ P++ TYN L+ C
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + A+ +++ + R + P I TY +I+G C G +++ ++F + G+ D +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 544 FRILKKRYRRMKESDKA 560
+ + + R ++A
Sbjct: 539 YNTMISGFCRKGSKEEA 555
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 206/403 (51%), Gaps = 9/403 (2%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
L+ A + EM + RP P+ ++ ++ ++N+ D + L M N GI N T++I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
L++ C++ L A+ LG+++ +++T + L++ Y + +A+AL + MF
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLG---YEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
Q + V +N LI+G L+ S A A +M+ +G PD++TY ++N LCK+G D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
A + + + + P + Y TII GLC + + A M K + P ++ +I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
YGR D S S M+ ++ +VFTF+ALI A + G + +A L EM+
Sbjct: 299 SCLCNYGRWSDASRLLSD---MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
I P + TY+ LI C + A Q+++ M+ + PD++TY LIKG C ++E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
EVF ++ GL + + + IL + + + D A++I ++ +
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 213/431 (49%), Gaps = 5/431 (1%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
DYR ++ R+ K+ A+ L +M++ P ++ + L++ + K+ + +
Sbjct: 47 DYREKLS--RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 104
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
+M + N TY+ I +CR ++L AL + M G PN VT + L++ C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
+ +AV + ++ + +T L+ F + +A+AL + M K Q D+
Sbjct: 165 KRISEAVALVDQMFVTG---YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V Y V++NG C GD AF +M + P V+ YNT+++ LCK +D+A + +
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ G+ P+ ++Y ++I LC +G A L M+E+ + P+ ++ +ID + + G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
L A + D M+ + ++ T+++LI + +A + + M+ FPDV TYN
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
LI C + ++++ EM +RG+ + +TY LI+G G+ A+E+F ++ + G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 537 LAIDHIPFRIL 547
+ + + + L
Sbjct: 462 VPPNIMTYNTL 472
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
V+ +++ + ++I C+ ++ A + M+ K PDV+T+N L+ CK +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
E+ V REMS+ N TYN I G + + D A +F M ++G+ PN +T+N L
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC KNG +A+ ++ + +
Sbjct: 473 LDGLC--------------------------------------KNGKLEKAMVVFEYLQR 494
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++ I YN++I G C G + + FC + +G PDV+ YNT+++ C++G +E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
A + + + G P+ Y T+I+ GD + E + M
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I+ C ++ + + R+M Q+G V + +T+N L+ L + GD + A + +EM
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
PN TYN + G C+ +L+KA+ +F + + + P T+NI++ +CK G + D
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ DV+ ++ + + G K +A AL+ +M + + YN L
Sbjct: 521 WDLFCNLSLKG---VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
I +GD ++ +M GF D T + N L G+LD++
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R +E + +I +C GK+ L + KG PDV+ +N +++ C+ G E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+AD + +EM E PN YN I R + + + L M + G + T ++
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Query: 231 HAL 233
+ L
Sbjct: 614 NML 616
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 217/425 (51%), Gaps = 3/425 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I LCL G++ AL L +M++ G PD +T+ ++N LCK G+ A + R+M E
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ Y+ I C+ D AL LF+ M GI+ + VT++ L+ LC G D
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L E++ + DV+T + L+D + K G +A L+N+M + I D + YN L
Sbjct: 300 AKMLREMIGRN---IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+GFC + A F M+ +G PD++TY+ L+N CK ++D+ + +S G+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P+ I+Y T++ G C G + A+E M+ + V P + +++DG G+L+ A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
I + M ++ + +N +I + DA+SL + G+ PDV TYN++IG C
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
G + A L+ +M G TPD TY LI+ H + + E+ +++ G + D
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Query: 543 PFRIL 547
+++
Sbjct: 597 TIKMV 601
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 229/469 (48%), Gaps = 38/469 (8%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D +I C K+ A + + + G PD +T + LVN C G + +A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ M EM+ P+ T + I G C + +AL L M G +P+ VT+ +++ L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK G A+ ++ ++ + V+ +I++DS K+G AL+L+N+M K I+
Sbjct: 221 CKSGNSALALDLFRKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D+V Y+ LI G C +G +M+ R +PDV+T++ L++ K+GKL EA
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
Y + G+APD I+Y ++I G C + +A + M+ K P+ ++++I+ Y +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
+ + + + S G+ N T+N L+L + G + A L +EM+ G+ P V T
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 474 YNLLIGASCNLGHIHLALQLYDEMLR---------------------------------- 499
Y +L+ C+ G ++ AL+++++M +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 500 -RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
+G+ PD++TY +I G C +G++ EA+ +F K++ G D + IL
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 234/461 (50%), Gaps = 20/461 (4%)
Query: 90 LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIR----DLCLGGKIGTALWLRRKMI 145
+D+ + + +D ++M + P+ ++ + R AV R DL LG G L
Sbjct: 47 VDIKVNDAIDLFESMIQSRPLPTPIDFN-RLCSAVARTKQYDLVLGFCKGMEL------- 98
Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
G D+ T ++N C+ L A V+ ++ P+ T++ + G+C +
Sbjct: 99 -NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
+A+ L M RP+ VT + L++ LC KG + +A+ + ++ + D +T
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV---EYGFQPDEVTYG 214
Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
+++ K+G+ AL L+ M ++NI+ +V Y+++I+ C +G A + F +M +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
G DV+TY++L+ LC GK D+ + + + PD +++ +I G +++A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
+E M+ + + P+ +N +IDG+ + L A + DLM+S G ++ T++ LI +
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
+ + D L +E+ G+ P+ TYN L+ C G ++ A +L+ EM+ RG+ P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQ----TLGLAIDHI 542
++TY L+ G C G + +A E+F K+Q TLG+ I +I
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 186/373 (49%), Gaps = 7/373 (1%)
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+++ A+ LF +M + P + N L A+ + D V LG + D+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY-DLV--LGFCKGMELNGIEHDMY 106
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T TI+++ Y + A ++ ++ + D + ++ L+NGFCL G +S A A +M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
++ PD++T +TL+N LC +G++ EA + + G PD+++Y ++ LC G+
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
A + M E+++ ++++ID + G +A S+ + M G+ ++V T+++L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
I G D + +EM+ I PDV T++ LI G + A +LY+EM+ RGI
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA-- 560
PD ITY LI G C + EA ++F + + G D + + IL Y + K D
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 561 --RDIHQKWLLRN 571
R+I K L+ N
Sbjct: 407 LFREISSKGLIPN 419
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 4/236 (1%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E D + +I C ++ + L R++ KG +P+ +T+N LV C+ G L A
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ +EM P+ TY + G C EL+KAL +F M + + +NI++H +C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
+ DA + D DV+T +++ K G +A L+ M +
Sbjct: 502 NASKVDDAWSLFCSL---SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
D YN+LI + S+ +M GF D T +++ L + +LD++
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR-RLDKS 613
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 222/425 (52%), Gaps = 7/425 (1%)
Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
+E YR +I L L K A+ L +M+Q+G P+++T+ +VN LCK GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+ A +++ +M + + +N I C+ +D AL+LF M GIRPN VT++ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC G DA + L +++ + K +++T L+D++ K G +A L++DM +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++I DI YN L+NGFC++ + A F M+ + PDV+TYNTL+ CK ++++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ + +S G+ D ++Y T+IQGL GD A++ M+ V P+ +++++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
G G L A + D M + +++ + +I + G + D + L + L G+ P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
+V TYN +I C+ + A L +M G P+ TY LI+ H G+ + E+
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 530 AKIQT 534
++++
Sbjct: 599 REMRS 603
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 224/446 (50%), Gaps = 16/446 (3%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C +I AL L KM++ G P ++T + L+N C + A ++ +M EM
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ T+ I G N+ +A+ L M G +PN VT+ ++V+ LCK+G A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ A K +DV+ ++DS K AL L+ +M K I+ ++V Y+ LI
Sbjct: 246 NLLNKMEA---AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C G S A M+++ P+++T+N L++ K+GK EA Y + K +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +Y +++ G C+H + KA++ M+ K P+ +N +I G+ + + + +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M G+ + T+ LI G +A + K+M+ DG+ PD+ TY++L+ CN
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + AL+++D M + I DI YT +I+G C G + + ++F + G+ + +
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 544 F----------RILKKRY---RRMKE 556
+ R+L++ Y ++MKE
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 229/474 (48%), Gaps = 15/474 (3%)
Query: 74 NKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGK 133
+++ +GNP+ +++DL M G + DYR ++R+ K
Sbjct: 18 HRNLQGKGNPRIAPSSIDLC---------GMCYWGRAFSSGSGDYRE---ILRNGLHDMK 65
Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
+ A+ L M++ +P ++ N L++ + K+ + + +M + TYN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
I +CR +++ AL L M G P+ VT + L++ C + DAV + +++
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV--- 182
Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
+ D IT T L+ F + +A+AL + M Q+ Q ++V Y V++NG C GD
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
A +M DV+ +NT+++ LCK +D+A + + + G+ P+ ++Y ++I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
LC +G A + L M+EK + P +N +ID + + G A + D M+ +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
++FT+N+L+ + A + + M+ FPDV TYN LI C + +L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
+ EM RG+ D +TYT LI+G G+ A++VF ++ + G+ D + + IL
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 44/315 (13%)
Query: 82 NPQAV-FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
NP V FNAL D +KE ++ K D ++ +++ D + +++ C+ ++ A
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDM--IKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
+ M+ K PDV+T+N L+ CK +E + REMS + TY I G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
+ D A +F M ++G+ P+ +T++IL+ LC
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC----------------------- 481
Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
NG +AL +++ M + I+ DI Y +I G C G + +
Sbjct: 482 ---------------NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
FC + +G P+V+TYNT+++ LC + L EA + + G P+ +Y T+I+
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 378 IHGDIVKAREFLLSM 392
GD + E + M
Sbjct: 587 RDGDKAASAELIREM 601
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 39/237 (16%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
L D + +I+ L G A + ++M+ G PD++T++ L++ LC G LEKA
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
V M + + Y I G C+ ++D LF +++ G++PN VT+N ++ L
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C K LL +A AL M +
Sbjct: 551 CSKRLLQ--------------------------------------EAYALLKKMKEDGPL 572
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
+ YN LI +GD +++ +M F+ D T + N L G+LD++
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 221/418 (52%), Gaps = 3/418 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I L L K A+ L +M+ +G PD+ T+ +VN LCK GD++ A ++++M +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ + Y I C ++ AL+LF+ M N GIRPN VT+N L+ LC G DA
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +++ + K +V+T + L+D++ K G +A L+++M +++I DI Y+ L
Sbjct: 310 SRLLSDMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
INGFC++ + A F M+ + P+V+TYNTL+ CK +++E + +S+ G+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
+ ++Y T+IQGL GD A++ M+ V P+ +++++DG + G L A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ + + + +++T+N +I + G + D + L + L G+ P+V Y +I C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
G A L+ EM G P+ TY LI+ G+ + E+ ++++ G D
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 242/491 (49%), Gaps = 16/491 (3%)
Query: 85 AVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
A N DL++ +R++ +R + D + +I C ++ AL + KM
Sbjct: 91 AKMNKFDLVISLG-ERMQNLR--------ISYDLYSYNILINCFCRRSQLPLALAVLGKM 141
Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
++ G PD++T + L+N C + +A ++ +M M PN T+N I G N+
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
+A+ L M G +P+ T+ +V+ LCK+G + A+ L ++ + GK +DV+
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM---EKGKIEADVVIY 258
Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
T ++D+ + AL L+ +M K I+ ++V YN LI C G S A M++
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
R P+V+T++ L++ K+GKL EA Y + K + PD +Y ++I G C+H + +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
A+ M+ K P +N +I G+ + + + M G+ N T+N LI
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
+ G A + K+M+ DG+ PD+ TY++L+ C G + AL +++ + + + P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR--MKESDKA-- 560
DI TY +I+G C G +++ ++F + G+ + I + + + R +KE A
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 561 RDIHQKWLLRN 571
R++ + L N
Sbjct: 559 REMKEDGTLPN 569
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 223/458 (48%), Gaps = 8/458 (1%)
Query: 90 LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
LDL L + +D M + P+ +E + + ++ I + K + L +M
Sbjct: 57 LDLKLDDAVDLFGEMVQSRPLPSIVE--FNKLLSAIAKM---NKFDLVISLGERMQNLRI 111
Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
D+ ++N L+N C+ L A V+ +M ++ P+ T ++ + GYC + +A+
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
L M +PN VT N L+H L +AV + ++A D+ T +++
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG---CQPDLFTYGTVVN 228
Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
K GD AL+L M + I+ D+V Y +I+ C +++ A F +M +G P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
+V+TYN+L+ CLC G+ +AS + + + P+ +++ +I G +V+A +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
M+++S+ P+ ++ +I+G+ L A + +LM+S NV T+N LI +
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
+ + L +EM G+ + TYN LI G +A +++ +M+ G+ PDIITY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
+ L+ G C G +++A VF +Q + D + I+
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 217/431 (50%), Gaps = 5/431 (1%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
DYR ++ R++ L K+ A+ L +M+Q +P ++ N L++ + K+ + +
Sbjct: 46 DYREKLS--RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG 103
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
M +R S + +YN I +CR ++L AL + M G P+ VT + L++ C
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
+ +AV + ++ + + +T L+ F + +A+AL + M + Q D+
Sbjct: 164 KRISEAVALVDQMFVME---YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
Y ++NG C GDI A + +M K DV+ Y T+++ LC +++A + +
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ G+ P+ ++Y ++I+ LC +G A L M+E+ + P ++ +ID + + G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
L A + D M+ + ++FT+++LI + +A + + M+ FP+V TYN
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
LI C + ++L+ EM +RG+ + +TY LI+G G+ A+++F K+ + G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 537 LAIDHIPFRIL 547
+ D I + IL
Sbjct: 461 VPPDIITYSIL 471
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 202/403 (50%), Gaps = 9/403 (2%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
L+ A + EM + RP P+ +N ++ ++N+ D + L M N I + ++NI
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
L++ C++ L A+ LG+++ D++T + L++ Y +A+AL + MF
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLG---YEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
Q + V +N LI+G L+ S A A +M+ RG PD+ TY T++N LCK+G +D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
A + K + D + Y TII LC + ++ A M K + P +N +I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
YGR D S S M+ ++ NV TF+ALI A + G + +A L EM+
Sbjct: 298 RCLCNYGRWSDASRLLSD---MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
I PD+FTY+ LI C + A +++ M+ + P+++TY LIKG C ++E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
E+F ++ GL + + + L + + + D A+ I +K +
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 3/287 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I GK+ A L +MI++ PD+ T++ L+N C L++A H+ M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
PN TYN I G+C+ +++ + LF M+ G+ N VT+N L+ L + G A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K ++++D D+IT +IL+D K G +AL ++ + + ++ DI YN++
Sbjct: 450 QKIFKKMVSDG---VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I G C G + + FC + +G P+VI Y T+++ C++G +EA + + + G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
P+ +Y T+I+ GD + E + M V + +++I+
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 7/298 (2%)
Query: 82 NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V F+AL D +KE L + + D ++ +++ D + ++I C+ ++ A
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ MI K P+V+T+N L+ CK +E+ + REMS+ N TYN I G
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ + D A +F M ++G+ P+ +T++IL+ LCK G L A+ E L K
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYL--QKSKME 497
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
D+ T I+++ K G L+ + K ++ +++ Y +I+GFC G A A
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
F +M + G LP+ TYNTL+ + G ++ + G D + +I L
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 217/412 (52%), Gaps = 3/412 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I L L K A+ L +M+Q+G P+++T+ +VN LCK GD++ A +++ +M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ + +N I C+ +D AL+LF M GIRPN VT++ L+ LC G DA
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +++ + K +++T L+D++ K G +A L +DM +++I DI YN L
Sbjct: 240 SQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
INGFC++ + A F M+ + PD+ TYNTL+ CK ++++ + + +S G+
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
D ++Y T+IQGL GD A++ M+ V P+ +++++DG G L A
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ D M + +++ + +I + G + D + L + L G+ P+V TYN +I C
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
+ + A L +M G PD TY LI+ H G+ + E+ ++++
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 224/446 (50%), Gaps = 16/446 (3%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C +I AL L KM++ G P ++T + L+N C + A ++ +M EM
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ T+ I G N+ +A+ L M G +PN VT+ ++V+ LCK+G + A
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ A K +DV+ ++DS K AL L+ +M K I+ ++V Y+ LI
Sbjct: 171 NLLNKMEA---AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C G S A M+++ P+++T+N L++ K+GK EA + + K +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +Y ++I G C+H + KA++ M+ K P+ +N +I G+ + + + +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M G+ + T+ LI G +A + K+M+ DG+ PD+ TY++L+ CN
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + AL+++D M + I DI YT +I+G C G + + ++F + G+ + +
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 544 F----------RILKKRY---RRMKE 556
+ R+L++ Y ++MKE
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 204/404 (50%), Gaps = 3/404 (0%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
M++ +P + N L++ + K+ + + +M + S N TYN I +CR ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
+ AL L M G P+ VT + L++ C + DAV + +++ + D IT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV---EMGYRPDTIT 117
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
T L+ F + +A+AL + M Q+ Q ++V Y V++NG C GDI AF +M
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
DV+ +NT+++ LCK +D+A + + + G+ P+ ++Y ++I LC +G
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A + L M+EK + P +N +ID + + G A + D M+ + ++FT+N+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
+ A + + M+ FPD+ TYN LI C + +L+ EM RG+
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
D +TYT LI+G G+ A++VF ++ + G+ D + + IL
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 3/349 (0%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D +I LC + AL L ++M KG P+V+T++ L++ LC G A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M E + +PN T+NA I + + + +A L M I P+ T+N L++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C L D K + E + D D+ T L+ + K+ L+ +M + +
Sbjct: 301 CMHDRL-DKAKQMFEFMVSKD--CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D V Y LI G +GD +A F QM+ G PD++TY+ LL+ LC GKL++A
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ + K+ + D Y T+I+G+C G + + S+ K V P +N +I G
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
L A+++ M G + T+N LI A R G + L +EM
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 44/315 (13%)
Query: 82 NPQAV-FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
NP V FNAL D +KE ++ K D ++ +++ D + ++I C+ ++ A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDM--IKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
+ M+ K PD+ T+N L+ CK +E + REMS + TY I G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
+ D A +F M ++G+ P+ +T++IL+ LC
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC----------------------- 406
Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
NG +AL +++ M + I+ DI Y +I G C G + +
Sbjct: 407 ---------------NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
FC + +G P+V+TYNT+++ LC + L EA + + G PD +Y T+I+
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 378 IHGDIVKAREFLLSM 392
GD + E + M
Sbjct: 512 RDGDKAASAELIREM 526
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 119/251 (47%)
Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
+M + G ++ TYN L+NC C++ ++ A G + K G P ++ +++ G C
Sbjct: 35 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
I A + M+E P+ + +I G S A ++ D M+ G N+ T+
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
++ + G I AF+L +M I DV +N +I + C H+ AL L+ EM +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
GI P+++TY+ LI C+ G +A ++ + + + + + F L + + + +A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 561 RDIHQKWLLRN 571
+H + R+
Sbjct: 275 EKLHDDMIKRS 285
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 39/234 (16%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D + +I+ L G A + ++M+ G PD++T++ L++ LC G LEKA V
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
M + + Y I G C+ ++D LF +++ G++PN VT+N ++ LC K
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
LL +A AL M + D
Sbjct: 479 RLLQ--------------------------------------EAYALLKKMKEDGPLPDS 500
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
YN LI +GD +++ +M F+ D T + N L G+LD++
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 553
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 223/418 (53%), Gaps = 3/418 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I L L K A+ L +M+Q+G PD++T+ +VN LCK GD++ A ++++M +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ + YN I G C+ +D AL+LF+ M N GIRP+ T++ L+ LC G DA
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +++ + K +V+T + L+D++ K G +A L+++M +++I DI Y+ L
Sbjct: 313 SRLLSDMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
INGFC++ + A F M+ + P+V+TY+TL+ CK +++E + +S+ G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
+ ++Y T+I G D A+ M+ V P +N+++DG + G L+ A
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ + + + +++T+N +I + G + D + L + L G+ P+V YN +I C
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
G A L +M G P+ TY LI+ G+ + + E+ ++++ G A D
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 221/450 (49%), Gaps = 3/450 (0%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D + I C ++ AL + KM++ G PD++T + L+N C + A ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
+M EM P+ T+ I G N+ +A+ L M G +P+ VT+ +V+ LCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
G + A+ L ++ + GK +DV+ ++D K AL L+ +M K I+ D+
Sbjct: 237 GDIDLALSLLKKM---EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
Y+ LI+ C G S A M++R P+V+T++ L++ K+GKL EA Y
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ K + PD +Y ++I G C+H + +A+ M+ K P ++ +I G+ +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
+ + M G+ N T+ LI + +A + K+M+ G+ P++ TYN+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
L+ C G + A+ +++ + R + PDI TY +I+G C G +++ E+F + G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQK 566
++ + I + + + R ++A + +K
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 210/415 (50%), Gaps = 3/415 (0%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K+ A+ L M++ P ++ N L++ + K+ E + +M + S + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
FI +CR ++L AL + + M G P+ VT + L++ C + DAV + +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-- 180
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ D T T L+ F + +A+AL + M Q+ Q D+V Y ++NG C GDI
Sbjct: 181 -EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A + +M K DV+ YNT+++ LCK +D+A + + + G+ PD +Y ++
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I LC +G A L M+E+ + P ++ +ID + + G L A + D M+ +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
++FT+++LI + +A + + M+ FP+V TY+ LI C + ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
L+ EM +RG+ + +TYT LI G + A+ VF ++ ++G+ + + + IL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 214/437 (48%), Gaps = 14/437 (3%)
Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
G+ W R G ++L N L I ++ A + +M + RP P+ +N
Sbjct: 35 GSGCWERSFASASGDYREILR-----NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89
Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
++ ++N+ + + L M GI + T++I ++ C++ L A+ L +++
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK--- 146
Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
D++T + L++ Y + A+AL + M + + D + LI+G L+ S
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
A A QM++RG PD++TY T++N LCK+G +D A + K + D + Y TII
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID---GYGRCGDLSNAFSIRDLMLSFG 431
GLC + + A M K + P+ ++ +I YGR D S S M+
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD---MIERK 323
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
++ NV TF+ALI A + G + +A L EM+ I PD+FTY+ LI C + A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
+++ M+ + P+++TY+ LIKG C ++E E+F ++ GL + + + L +
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 552 RRMKESDKARDIHQKWL 568
+ ++ D A+ + ++ +
Sbjct: 444 FQARDCDNAQMVFKQMV 460
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 180/373 (48%), Gaps = 7/373 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D + +I LC + AL L +M KG PDV T++ L++ LC G A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M E + +PN T++A I + + +L +A L+ M I P+ T++ L++
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C L D K + E++ D +V+T + L+ + K + + L+ +M Q+ +
Sbjct: 374 CMHDRL-DEAKHMFELMISKD--CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+ V Y LI+GF D +A F QM+ G P+++TYN LL+ LCK GKL +A
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ L ++ + PD +Y +I+G+C G + E ++ K V P +N +I G+ R
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
G A S+ M G N T+N LI A R G + L KEM G D T
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Query: 474 YNLLIGASCNLGH 486
IG N+ H
Sbjct: 611 ----IGLVTNMLH 619
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 82 NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V F+AL D +KE L + + D ++ +++ D + ++I C+ ++ A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ MI K P+V+T++ L+ CK +E+ + REMS+ N TY I G+
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ + D A +F M + G+ PN +T+NIL+ LCK G L
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA------------------ 485
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
+A+ ++ + + ++ DI YN++I G C G + +
Sbjct: 486 --------------------KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
FC + +G P+VI YNT+++ C++G +EA + + G P+ +Y T+I+
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 379 HGDIVKAREFLLSM 392
GD + E + M
Sbjct: 586 DGDREASAELIKEM 599
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I+ C ++ + L R+M Q+G V + +T+ L++ + D + A V ++M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ PN TYN + G C+ +L KA+ +F + + + P+ T+NI++ +CK G +
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
D E+ + K S +VI ++ + + G K +A +L M + + Y
Sbjct: 521 DG----WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
N LI +GD ++ +M GF D T + N L G+LD++
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R T+E D + +I +C GK+ L + KG P+V+ +N +++ C+ G E
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+AD ++++M E P PN TYN I R + + + L M + G + T ++
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Query: 231 HAL 233
+ L
Sbjct: 616 NML 618
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 215/402 (53%), Gaps = 3/402 (0%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
+ A+ L +M+ KG PD++T+ +VN LCK GD++ A ++++M + + P YN
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I C ++ AL+LF+ M N GIRPN VT+N L+ LC G DA + L +++
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-- 318
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ K +V+T + L+D++ K G +A L+++M +++I DI Y+ LINGFC++ +
Sbjct: 319 -ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F M+ + P+V+TYNTL+ CK ++DE + +S+ G+ + ++Y T+
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G + A+ M+ V+P+ +++++DG G + A + + + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
+++T+N +I + G + D + L + L G+ P+V TY ++ C G A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
L+ EM G PD TY LI+ H G+ + E+ ++++
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 219/437 (50%), Gaps = 3/437 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C ++ AL + KM++ G PD++T N L+N C + A ++ +M EM
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ T+N I G R N +A+ L M G +P+ VT+ I+V+ LCK+G + A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ + GK V+ ++D+ + AL L+ +M K I+ ++V YN LI
Sbjct: 242 SLLKKM---EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
C G S A M++R P+V+T++ L++ K+GKL EA Y + K +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +Y ++I G C+H + +A+ M+ K P +N +I G+ + + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M G+ N T+ LI + +A + K+M+ DG+ PD+ TY++L+ CN
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + AL +++ + R + PDI TY +I+G C G +++ ++F + G+ + +
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 544 FRILKKRYRRMKESDKA 560
+ + + R ++A
Sbjct: 539 YTTMMSGFCRKGLKEEA 555
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 222/445 (49%), Gaps = 12/445 (2%)
Query: 104 MRDTGPVRCTLETDYRR-HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
+RD VR DYR+ + + DL K+ A+ L M++ P ++ + L++
Sbjct: 39 VRDFSGVR----YDYRKISINRLNDL----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSA 90
Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
+ K+ + + +M + S N TY+ I +CR ++L AL + + M G P+
Sbjct: 91 IAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPD 150
Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
VT N L++ C + DAV +G+++ + D T L+ F++ +A+A
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMV---EMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
L + M K Q D+V Y +++NG C GDI A + +M + P V+ YNT+++ LC
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
+++A + + + G+ P+ ++Y ++I+ LC +G A L M+E+ + P
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
++ +ID + + G L A + D M+ + ++FT+++LI + +A + + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
+ FP+V TYN LI C + ++L+ EM +RG+ + +TYT LI G
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 523 KEAEEVFAKIQTLGLAIDHIPFRIL 547
A+ VF ++ + G+ D + + IL
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSIL 472
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 192/407 (47%), Gaps = 42/407 (10%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
L+ A ++ +M + RP P+ ++ ++ ++N+ D + L M N GI N T++I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
L++ C++ L ALA+ M
Sbjct: 122 LINCFCRRSQLS--------------------------------------LALAVLAKMM 143
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+ + DIV N L+NGFC IS A + QM++ G+ PD T+NTL++ L + +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
EA + G PD ++Y ++ GLC GDI A L M + + P I+N II
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
D ++++A ++ M + G+ NV T+N+LI G DA L +M+ I
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
P+V T++ LI A G + A +LYDEM++R I PDI TY+ LI G C + EA+ +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
F + + + + + L K + + K D+ R++ Q+ L+ N
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 82 NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V F+AL D +KE L + + D ++ +++ D + ++I C+ ++ A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ MI K P+V+T+N L+ CK +++ + REMS+ N TY I G+
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ E D A +F M ++G+ P+ +T++IL+ LC
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC------------------------ 477
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
NG AL ++ + + ++ DI YN++I G C G + +
Sbjct: 478 --------------NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
FC + +G P+V+TY T+++ C++G +EA + + + G PD +Y T+I+
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 379 HGDIVKAREFLLSM 392
GD + E + M
Sbjct: 584 DGDKAASAELIREM 597
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++ C G A L R+M ++G +PD T+N L+ + GD + +IREM
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKAL 208
R + +T +T LDK+
Sbjct: 599 SCRFVGDASTI-GLVTNMLHDGRLDKSF 625
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 214/408 (52%), Gaps = 3/408 (0%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K A+ L +M+ KG PD++T+ ++N LCK G+ + A +++ +M + + + Y+
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I C+ +D AL+LF+ M N GIRP+ T++ L+ LC G DA + L ++L
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML-- 302
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ K +V+T L+D++ K G +A L+++M Q++I +IV YN LINGFC++ +
Sbjct: 303 -ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F M+ + LPDV+TYNTL+N CK K+ + + +S+ G+ + ++Y T+
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G D A+ M+ V P +N ++DG + G L A + + + +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
+++T+N + + G + D + L + L G+ PDV YN +I C G A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
L+ +M G PD TY LI+ H G+ + E+ ++++ A D
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 214/438 (48%), Gaps = 5/438 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+++ C G +I A+ L +M++ G PD +T LV+ L + +A ++ M
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ TY A I G C+ E D AL+L + M I + V ++ ++ +LCK + DA
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ E+ D+ DV T + L+ G A L +DM ++ I ++V +N L
Sbjct: 260 LNLFTEM---DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+ F G + A F +M++R P+++TYN+L+N C +LDEA + ++
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
PD ++Y T+I G C +V E M + +V + +I G+ + D NA
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ M+S GV N+ T+N L+ + G + A + + + + PD++TYN++ C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
G + L+ + +G+ PD+I Y +I G C +G +EA +F K++ G D
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 543 PFRILKKRYRRMKESDKA 560
+ L + + +++ DKA
Sbjct: 557 TYNTLIRAH--LRDGDKA 572
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 220/424 (51%), Gaps = 3/424 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I LC ++ AL + KM++ G P ++T N L+N C + +A ++ +M EM
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ T+ + G + N+ +A+ L M G +P+ VT+ +++ LCK+G A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ + GK +DV+ + ++DS K AL L+ +M K I+ D+ Y+ LI
Sbjct: 226 NLLNKM---EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C G S A ML+R P+V+T+N+L++ K+GKL EA + + + +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P+ ++Y ++I G C+H + +A++ M+ K +P+ +N +I+G+ + + + +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M G+ N T+ LI + +A + K+M+ DG+ P++ TYN L+ C
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + A+ +++ + + + PDI TY + +G C G +++ ++F + G+ D I
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 544 FRIL 547
+ +
Sbjct: 523 YNTM 526
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 203/420 (48%), Gaps = 5/420 (1%)
Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
YR ++ R+ L K+ A+ L +M++ P ++ + L++ + K+ +
Sbjct: 32 YREKLS--RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGE 89
Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
+M + S N TYN I CR ++L AL + M G P+ VT N L++ C
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
+ +AV + +++ + D +T T L+ F++ +A+AL M K Q D+V
Sbjct: 150 RISEAVALVDQMV---EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
Y +ING C G+ A +M K DV+ Y+T+++ LCK +D+A + + +
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
G+ PD +Y ++I LC +G A L MLE+ + P +N +ID + + G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
A + D M+ + N+ T+N+LI + +A + M+ PDV TYN L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
I C + ++L+ +M RRG+ + +TYT LI G + A+ VF ++ + G+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 180/364 (49%), Gaps = 3/364 (0%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D + VI LC + AL L +M KG PDV T++ L++ LC G A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M E + +PN T+N+ I + + +L +A LF M I PN VT+N L++
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C L +A + +++ D DV+T L++ + K + L+ DM ++ +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKD---CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+ V Y LI+GF D +A F QM+ G P+++TYNTLL+ LCK GKL++A
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ L K+ + PD +Y + +G+C G + + S+ K V P+ +N +I G+ +
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
G A+++ M G + T+N LI A R G + L KEM D T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 474 YNLL 477
Y L+
Sbjct: 593 YGLV 596
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 197/403 (48%), Gaps = 9/403 (2%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
L++A + EM + RP P+ ++ ++ ++ + D + M G+ N T+NI
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
+++ LC++ L A+ LG+++ G + ++T L++ + +A+AL + M
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPS---IVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+ Q D V + L++G + S A A +M+ +G PD++TY ++N LCK+G+ D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
A + + K + D + Y T+I LC + + A M K + P+ ++ +I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
YGR D S S ML ++ NV TFN+LI A + G + +A L EM+
Sbjct: 283 SCLCNYGRWSDASRLLSD---MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
I P++ TYN LI C + A Q++ M+ + PD++TY LI G C + +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
E+F + GL + + + L + + + D A+ + ++ +
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 153/328 (46%), Gaps = 32/328 (9%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + ++I LC G+ A L M+++ P+V+T N L++ K G L +A+
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM + PN TYN+ I G+C + LD+A +F+ M + P+ VT+N L++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 234 CK----------------KGLLGDAVKFL----GEVLADDDGKAT------------SDV 261
CK +GL+G+ V + G A D A ++
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
+T L+D KNG +A+ ++ + + ++ DI YN++ G C G + + FC
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
+ +G PDVI YNT+++ CK+G +EA + + + G PD +Y T+I+ GD
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ E + M + + ++ D
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 82 NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V FN+L D KE L + + D R +++ + + ++I C+ ++ A
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ M+ K +PDV+T+N L+N CK + + R+MS N TY I G+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV---KFLGEVLADDD- 254
+ ++ D A +F M ++G+ PN +T+N L+ LCK G L A+ ++L + + D
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 255 -------------GKAT---------------SDVITSTILMDSYFKNGDKFQALALWND 286
GK DVI ++ + K G K +A L+
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
M + D YN LI +GD +++ +M F D TY + + L G+
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGR 604
Query: 347 LDEASHFYGVLS 358
LD+ F VLS
Sbjct: 605 LDKG--FLEVLS 614
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 212/392 (54%), Gaps = 5/392 (1%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
++M++ P+V T+N L+ C G+++ A + +M PN TYN I GYC++
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-D 260
++D L +MA G+ PN +++N++++ LC++G + + V F VL + + + S D
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE-VSF---VLTEMNRRGYSLD 309
Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
+T L+ Y K G+ QAL + +M + + ++ Y LI+ C G+++ A +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
QM RG P+ TY TL++ ++G ++EA ++ G +P ++Y +I G C+ G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
+ A L M EK + P+ ++ ++ G+ R D+ A ++ M+ G+ + T++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
+LI +A L +EML G+ PD FTY LI A C G + ALQL++EM+ +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
G+ PD++TY+ LI G + +EA+ + K+
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 213/417 (51%), Gaps = 4/417 (0%)
Query: 148 GTVPDVLTHNYLVNELCKIG-DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
G +P VL++N +++ + ++ A++V +EM E + SPN TYN I G+C +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
AL LF M G PN VT+N L+ CK + D K L + ++I+ +
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG---LEPNLISYNV 280
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
+++ + G + + +M ++ D V YN LI G+C G+ A +ML+ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
P VITY +L++ +CK G ++ A F + G+ P++ +Y T++ G G + +A
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
L M + P +N +I+G+ G + +A ++ + M G+S +V +++ ++
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
R + +A +K+EM+ GI PD TY+ LI C A LY+EMLR G+ PD
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
TYT LI +C G++++A ++ ++ G+ D + + +L + + +A+ +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 218/460 (47%), Gaps = 18/460 (3%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+IR C G I AL L KM KG +P+V+T+N L++ CK+ ++ ++R M+
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN +YN I G CR + + + + M G + VT+N L+ CK+G A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
E+L T VIT T L+ S K G+ +A+ + M + + + Y L+
Sbjct: 331 VMHAEMLRHG---LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+GF G ++ A+ +M GF P V+TYN L+N C GK+++A + + G++
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +SY T++ G C D+ +A M+EK + P+ ++ +I G+ A +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
+ ML G+ + FT+ ALI A G + A L EM+ G+ PDV TY++LI
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 484 LGHIHLALQLYDEMLRRGITPDIITY---------------TELIKGHCARGNMKEAEEV 528
A +L ++ P +TY LIKG C +G M EA++V
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
F + D + I+ + R + KA ++++ +
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 214/442 (48%), Gaps = 18/442 (4%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I C KI L R M KG P+++++N ++N LC+ G +++ V+ EM+
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
S + TYN I GYC+ +AL + + M +G+ P+ +T+ L+H++CK G + A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
++FL ++ + T T L+D + + G +A + +M +V YN L
Sbjct: 365 MEFLDQMRVRG---LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
ING C+ G + A A M ++G PDV++Y+T+L+ C+ +DEA + + G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
PD I+Y ++IQG C +A + ML + P+ + +I+ Y GDL A
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ + M+ GV +V T++ LI + +A L ++ + P TY+ LI
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 483 NL---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
N+ G + A Q+++ ML + PD Y +I GHC G++++A
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 528 VFAKIQTLGLAIDHIPFRILKK 549
++ ++ G + + L K
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVK 683
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 215/435 (49%), Gaps = 20/435 (4%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
LE + + VI LC G++ ++ +M ++G D +T+N L+ CK G+ +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM +P+ TY + I C+ +++A+ M G+ PN T+ LV
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
+KG + +A + L E+ +D+G + S V+T L++ + G A+A+ DM +K +
Sbjct: 391 SQKGYMNEAYRVLREM--NDNGFSPS-VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D+V+Y+ +++GFC + D+ A +M+++G PD ITY++L+ C+Q + EA
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
Y + + G+ PD+ +Y +I C+ GD+ KA + M+EK V+P+ ++V+I+G +
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 414 CGDLSNAFS-IRDLMLSFGVSSNVFTFNALI-----------LAETRG----GSIFDAFS 457
A + L V S+V T++ LI ++ +G G + +A
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDV-TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
+ + ML PD YN++I C G I A LY EM++ G +T L+K
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 518 ARGNMKEAEEVFAKI 532
G + E V +
Sbjct: 687 KEGKVNELNSVIVHV 701
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 205/416 (49%), Gaps = 39/416 (9%)
Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK-KGLLGDAVKFLG 247
+ ++ + Y R++ +DKAL + +G P +++N ++ A + K + A
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
E+L + + + +V T IL+ + G+ AL L++ M K ++V YN LI+G+C
Sbjct: 195 EML---ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
I F M +G P++I+YN ++N LC++G++ E S +++ G + D++
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 368 SYKTIIQGLC------------------------------IH-----GDIVKAREFLLSM 392
+Y T+I+G C IH G++ +A EFL M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
+ + P + ++DG+ + G ++ A+ + M G S +V T+NALI G +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
DA ++ ++M G+ PDV +Y+ ++ C + AL++ EM+ +GI PD ITY+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
I+G C + KEA +++ ++ +GL D + L Y + +KA +H + +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 198/403 (49%), Gaps = 18/403 (4%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++I +C G + A+ +M +G P+ T+ LV+ + G + +A V+REM+
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ SP+ TYNA I G+C +++ A+ + M G+ P+ V+++ ++ C+ +
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A++ E++ + D IT + L+ + + +A L+ +M + + D Y
Sbjct: 468 EALRVKREMV---EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
LIN +C+ GD+ A +M+++G LPDV+TY+ L+N L KQ + EA L
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 361 GVAPDQISYKTIIQ---------------GLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
P ++Y T+I+ G C+ G + +A + SML K+ P+ +N
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
++I G+ R GD+ A+++ M+ G + T AL+ A + G + + S+ +L
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
+ +L+ + G++ + L + EM + G P+ I+
Sbjct: 705 CELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 28/294 (9%)
Query: 77 SDNEGNPQAV-FNAL------DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLC 129
+DN +P V +NAL +++ + L+ M++ G L D + V+ C
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG-----LSPDVVSYSTVLSGFC 461
Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
+ AL ++R+M++KG PD +T++ L+ C+ ++A + EM + P+
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
TY A I YC +L+KAL L + M G+ P+ VT+++L++ L K+ +A + L ++
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 250 LADDDGKATSDVITSTI--------------LMDSYFKNGDKFQALALWNDMFQKNIQTD 295
++ SDV T+ L+ + G +A ++ M KN + D
Sbjct: 582 FYEES--VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
AYN++I+G C GDI A+ + +M+K GFL +T L+ L K+GK++E
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 211/404 (52%), Gaps = 3/404 (0%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
L L ++M KG + T + ++N C+ L A + ++ ++ P+ +N +
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
G C + +AL L M G +P +T N LV+ LC G + DAV + ++ + G
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV--ETGF 224
Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
++V +L + K+G A+ L M ++NI+ D V Y+++I+G C +G + +AF
Sbjct: 225 QPNEVTYGPVL-NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
F +M +GF D+ITYNTL+ C G+ D+ + + K ++P+ +++ +I
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
G + +A + L M+++ + P +N +IDG+ + L A + DLM+S G ++
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
TFN LI + I D L +EM L G+ + TYN L+ C G + +A +L+ E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
M+ R + PDI++Y L+ G C G +++A E+F KI+ + +D
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 222/453 (49%), Gaps = 12/453 (2%)
Query: 90 LDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
L+ + E L+ + M + G P TL T ++ LCL GK+ A+ L +M++
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNT-------LVNGLCLNGKVSDAVVLIDRMVET 222
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G P+ +T+ ++N +CK G A ++R+M E + Y+ I G C+ LD A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+LF+ M G + + +T+N L+ C G D K L +++ K + +V+T ++L
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR---KISPNVVTFSVL 339
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+DS+ K G +A L +M Q+ I + + YN LI+GFC + A M+ +G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
PD++T+N L+N CK ++D+ + +S GV + ++Y T++QG C G + A++
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
M+ + V P+ + +++DG G+L A I + + ++ + +I
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
+ DA+ L + L G+ D YN++I C + A L+ +M G PD +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
TY LI+ H + A E+ ++++ G D
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPAD 612
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 217/444 (48%), Gaps = 3/444 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C K+ A K+++ G PD + N L+N LC + +A ++ M EM
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P T N + G C ++ A+ L M G +PN VT+ +++ +CK G A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L ++ ++ D + +I++D K+G A L+N+M K + DI+ YN LI
Sbjct: 249 ELLRKM---EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
GFC G M+KR P+V+T++ L++ K+GKL EA + + G+A
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P+ I+Y ++I G C + +A + + M+ K P+ +N++I+GY + + + +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M GV +N T+N L+ + G + A L +EM+ + PD+ +Y +L+ C+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + AL+++ ++ + + DI Y +I G C + +A ++F + G+ +D
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 544 FRILKKRYRRMKESDKARDIHQKW 567
+ I+ R KA + +K
Sbjct: 546 YNIMISELCRKDSLSKADILFRKM 569
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 193/403 (47%), Gaps = 6/403 (1%)
Query: 171 KADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
KAD + R+M + RP P +N + + + + L L M + GI + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
I+++ C+ L A +G+++ G VI +T L++ +AL L + M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKL--GYEPDTVIFNT-LLNGLCLECRVSEALELVDRM 184
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
+ + ++ N L+NG CLNG +S A +M++ GF P+ +TY +LN +CK G+
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
A + + + D + Y II GLC G + A M K + +N +
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
I G+ G + + M+ +S NV TF+ LI + + G + +A L KEM+ GI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
P+ TYN LI C + A+Q+ D M+ +G PDI+T+ LI G+C + + E
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
+F ++ G+ + + + L + + + + + A+ + Q+ + R
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 38/280 (13%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
GK+ A L ++M+Q+G P+ +T+N L++ CK LE+A ++ M P+ T+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
N I GYC+ N +D L LF M+ G+ N VT+N LV C+ G L A K E+++
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+ D+++ IL+D NG+ +AL ++ + + ++ DI Y ++I+G C
Sbjct: 467 R---RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 312 ISSAFAYFC-----------------------------------QMLKRGFLPDVITYNT 336
+ A+ FC +M + G PD +TYN
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
L+ A+ + +G D + K +I L
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
+ +E D ++ +I +C K+ A L + KG D +N +++ELC+ L
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
KAD + R+M+E +P+ TYN I + ++ A L M ++G + T +++
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Query: 231 HAL 233
+ L
Sbjct: 621 NML 623
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 220/433 (50%), Gaps = 3/433 (0%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E D +I+ L L GK+ A+ L +M++ G PDV+T+N +VN +C+ GD A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
++R+M E + TY+ I CR +D A+ LF M GI+ + VT+N LV LC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K G D L ++++ + +VIT +L+D + K G +A L+ +M + I
Sbjct: 275 KAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+I+ YN L++G+C+ +S A M++ PD++T+ +L+ C ++D+ +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+SK G+ + ++Y ++QG C G I A E M+ V+P+ + +++DG
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
G L A I + + + + + +I +GG + DA++L + G+ P+V TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
++I C G + A L +M G P+ TY LI+ H G++ + ++ ++++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 535 LGLAIDHIPFRIL 547
G + D +++
Sbjct: 572 CGFSADASSIKMV 584
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 192/384 (50%), Gaps = 5/384 (1%)
Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
I D++K D + +EM RP P+ ++ F + R + + L + NGI N
Sbjct: 64 IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
T NI+++ C+ A LG+V+ D T L+ F G +A+ L
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLG---YEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
+ M + Q D+V YN ++NG C +GD S A +M +R DV TY+T+++ LC+
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
G +D A + + G+ ++Y ++++GLC G L M+ + +VP
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
+NV++D + + G L A + M++ G+S N+ T+N L+ + +A ++ M+
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
+ PD+ T+ LI C + + ++++ + +RG+ + +TY+ L++G C G +K
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
AEE+F ++ + G+ D + + IL
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGIL 444
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 186/381 (48%), Gaps = 8/381 (2%)
Query: 98 LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
LD L+ M + ++ D + +I LC G I A+ L ++M KG V+T+N
Sbjct: 213 LDLLRKMEER-----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
LV LCK G ++++M PN T+N + + + +L +A L+ M
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
GI PN +T+N L+ C + L +A L ++ + K + D++T T L+ Y
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKGYCMVKRV 384
Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
+ ++ ++ ++ + + V Y++L+ GFC +G I A F +M+ G LPDV+TY L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
L+ LC GKL++A + L K+ + + Y TII+G+C G + A S+ K V
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
P + V+I G + G LS A + M G + N T+N LI A R G + +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 458 LKKEMLLDGIFPDVFTYNLLI 478
L +EM G D + ++I
Sbjct: 565 LIEEMKSCGFSADASSIKMVI 585
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 194/397 (48%), Gaps = 3/397 (0%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
A+ L ++MI+ +P ++ + + + + +++ + N T N I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
+CR + A + + G P+ T N L+ L +G + +AV + ++ +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV---ENG 188
Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
DV+T +++ ++GD AL L M ++N++ D+ Y+ +I+ C +G I +A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
+ F +M +G V+TYN+L+ LCK GK ++ + + + P+ I++ ++
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
G + +A E M+ + + P +N ++DGY LS A ++ DLM+ S ++
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
TF +LI + D + + + G+ + TY++L+ C G I LA +L+ E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
M+ G+ PD++TY L+ G C G +++A E+F +Q
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 4/284 (1%)
Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
I +I N++IN FC A++ +++K G+ PD T+NTL+ L +GK+ EA
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
+ + G PD ++Y +I+ G+C GD A + L M E++V + ++ IID
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
R G + A S+ M + G+ S+V T+N+L+ + G D L K+M+ I P+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
T+N+L+ G + A +LY EM+ RGI+P+IITY L+ G+C + + EA +
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
+ + D + F L K Y +K D R+I ++ L+ N
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 7/299 (2%)
Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
K A+AL+ +M + +V ++ + + + Q+ G ++ T N
Sbjct: 69 KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
++NC C+ K A G + K G PD ++ T+I+GL + G + +A + M+E
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
P+ +N I++G R GD S A + M V ++VFT++ +I + R G I A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
SL KEM GI V TYN L+ C G + L +M+ R I P++IT+ L+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDIHQKWLLRNK 572
G ++EA E++ ++ T G++ + I + L Y R+ E++ D+ ++RNK
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL----MVRNK 363
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 39/289 (13%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
GK+ A L ++MI +G P+++T+N L++ C L +A++++ M + SP+ T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
+ I GYC V +D + +F ++ G+ N VT++ILV C+ G + A + E+++
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---------------------- 289
DV+T IL+D NG +AL ++ D+ +
Sbjct: 432 HG---VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 290 -------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
K ++ +++ Y V+I+G C G +S A +M + G P+ TYNT
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
L+ + G L ++ + G + D S K +I L + G++ K+
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDKS 596
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I +C GGK+ A L + KG P+V+T+ +++ LCK G L +A+ ++R+M
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
E +PN TYN I + R +L + L M + G + + +++ L
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 233/446 (52%), Gaps = 6/446 (1%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+++ LC + AL L M G+ PDV+++ ++N K GD +KA EM
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ TYN+ I C+ +DKA+ + +TM NG+ P+ +T+N ++H C G
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A+ FL ++ +D DV+T ++LMD KNG +A +++ M ++ ++ +I Y
Sbjct: 284 EAIGFLKKMRSDG---VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
L+ G+ G + M++ G PD ++ L+ KQGK+D+A + + +
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ P+ ++Y +I LC G + A + M+++ + P ++N +I G C A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
+ ML G+ N FN++I + + G + ++ L + M+ G+ P+V TYN LI
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520
Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
C G + A++L M+ G+ P+ +TY+ LI G+C M++A +F ++++ G++ D
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 541 HIPFRILKKRYRRMKESDKARDIHQK 566
I + I+ + + + + A++++ +
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVR 606
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 194/397 (48%), Gaps = 1/397 (0%)
Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
PD+ T+ L+ C+ G L+ + + + + + + G C A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 209 HL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+ M G PN ++NIL+ LC + +A++ L + D G + DV++ T +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
++ +FK GD +A + +++M + I D+V YN +I C + A M+K G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
+PD +TYN++L+ C G+ EA F + GV PD ++Y ++ LC +G ++AR+
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
SM ++ + PE + ++ GY G L + DLM+ G+ + + F+ LI A
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
+ G + A + +M G+ P+ TY +IG C G + A+ +++M+ G++P I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
Y LI G C + AEE+ ++ G+ ++ I F
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 196/430 (45%), Gaps = 19/430 (4%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
M++ G PD + L+ K G +++A V +M + +PN TY A I C+
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
++ A+ F M + G+ P + +N L+H LC A + + E+L D G + +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML--DRGICLNTIFF 479
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
++I+ DS+ K G ++ L+ M + ++ +++ YN LING+CL G + A M+
Sbjct: 480 NSII-DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
G P+ +TY+TL+N CK ++++A + + +GV+PD I+Y I+QGL
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A+E + + E E +N+I+ G + +A + + + TFN +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
A + G +A L +G+ P+ +TY L+ G + QL+ M G T
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKI---------QTLGLAIDHIP-------FRIL 547
D +++ RG + A + I T L ID + +R L
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFL 778
Query: 548 KKRYRRMKES 557
++Y+ ES
Sbjct: 779 PEKYKSFIES 788
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 4/315 (1%)
Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
+ T D+ T IL+ + G A ++ +K + D +A+ L+ G C + S A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 316 FAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK---TGVAPDQISYKT 371
+ M + G +P+V +YN LL LC + + EA +++ G PD +SY T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
+I G GD KA ML++ ++P+ +N II + + A + + M+ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
V + T+N+++ G +A K+M DG+ PDV TY+LL+ C G A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
+++D M +RG+ P+I TY L++G+ +G + E + + G+ DH F IL Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 552 RRMKESDKARDIHQK 566
+ + D+A + K
Sbjct: 382 AKQGKVDQAMLVFSK 396
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 38/333 (11%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
AVI LC G++ A+ +MI +G P + +N L++ LC E+A+ +I EM +
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 182 ----------------------------------MRPSPNCATYNAFITGYCRVNELDKA 207
+ PN TYN I GYC ++D+A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+ L S M + G++PN VT++ L++ CK + DA+ E+ + + D+IT I+
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM---ESSGVSPDIITYNII 587
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+ F+ A L+ + + Q ++ YN++++G C N A F +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
+ T+N +++ L K G+ DEA + S G+ P+ +Y+ + + + G + + +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
LSM + + + N I+ + G+++ A
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 38/300 (12%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
VR ++ + + +I CL GK+ A+ L M+ G P+ +T++ L+N CKI +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
E A + +EM SP+ TYN + G + A L+ + +G + T+NI+
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+H LCK L DA++ FQ L L
Sbjct: 623 LHGLCKNKLTDDALQM--------------------------------FQNLCLM----- 645
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
+++ + +N++I+ G A F G +P+ TY + + QG L+E
Sbjct: 646 -DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ + G D I++ L G+I +A +L + EK E ++ ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
+A + D +L G ++++ N LA+ S A S M D + PD+ TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNR-ALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
+LIG C G + L ++++G D I +T L+KG CA +A + V ++
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 535 LGLAIDHIPFRILKK 549
LG + + IL K
Sbjct: 152 LGCIPNVFSYNILLK 166
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 217/418 (51%), Gaps = 6/418 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I L L K A+ L +M+Q+G PD++T+ +VN LCK GD++ A +++ +M
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
R N +N I C+ ++ A+ LF+ M GIRPN VT+N L++ LC G DA
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +L + K +V+T L+D++FK G +A L +M Q++I D + YN+L
Sbjct: 313 SRLLSNML---EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
INGFC++ + A F M+ + LP++ TYNTL+N CK ++++ + +S+ G+
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
+ ++Y TIIQG GD A+ M+ V + +++++ G G L A
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
I + + N+F +N +I + G + +A+ L + I PDV TYN +I C
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLC 546
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
+ + A L+ +M G P+ TY LI+ + + + E+ ++++ G D
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 225/453 (49%), Gaps = 19/453 (4%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D + I C ++ AL + KM++ G PD++T + L+N C + A ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
+M EM P+ T+ I G N+ +A+ L M G +P+ VT+ +V+ LCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
G + A+ L ++ A + ++V+ ++DS K A+ L+ +M K I+ ++
Sbjct: 237 GDIDLALNLLNKMEA---ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V YN LIN C G S A ML++ P+V+T+N L++ K+GKL EA +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ + + PD I+Y +I G C+H + +A++ M+ K +P +N +I+G+ +C
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
+ + + M G+ N T+ +I + G A + K+M+ + + D+ TY++
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
L+ C+ G + AL ++ + + + +I Y +I+G C G + EA ++F +L
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC---SLS 530
Query: 537 LAIDHIPF----------RILKKR---YRRMKE 556
+ D + + R+L++ +R+MKE
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 204/415 (49%), Gaps = 3/415 (0%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K+ A+ L M++ P ++ N L++ + K+ E + +M + S + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
FI +CR ++L AL + + M G P+ VT + L++ C + DAV + +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-- 180
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ D T T L+ F + +A+AL + M Q+ Q D+V Y ++NG C GDI
Sbjct: 181 -EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A +M +V+ +NT+++ LCK ++ A + + G+ P+ ++Y ++
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I LC +G A L +MLEK + P +N +ID + + G L A + + M+ +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
+ T+N LI + +A + K M+ P++ TYN LI C + ++
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
L+ EM +RG+ + +TYT +I+G G+ A+ VF ++ + + D + + IL
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 211/437 (48%), Gaps = 14/437 (3%)
Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
G+ W R G ++L N L I ++ A + +M + RP P+ +N
Sbjct: 35 GSGCWERSFASASGDYREILR-----NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89
Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
++ ++N+ + + L M GI + T++I ++ C++ L A+ L +++
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK--- 146
Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
D++T + L++ Y + A+AL + M + + D + LI+G L+ S
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
A A QM++RG PD++TY T++N LCK+G +D A + + + + + + TII
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID---GYGRCGDLSNAFSIRDLMLSFG 431
LC + + A + M K + P +N +I+ YGR D S S ML
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN---MLEKK 323
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
++ NV TFNALI A + G + +A L +EM+ I PD TYNLLI C + A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
Q++ M+ + P+I TY LI G C +++ E+F ++ GL + + + + + +
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 552 RRMKESDKARDIHQKWL 568
+ + D A+ + ++ +
Sbjct: 444 FQAGDCDSAQMVFKQMV 460
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 49/336 (14%)
Query: 82 NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V FNAL D KE L + + + R +++ D + +I C+ ++ A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ + M+ K +P++ T+N L+N CK +E + REMS+ N TY I G+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ + D A +F M +N + + +T++IL+H LC G L
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD------------------ 485
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
AL ++ + + ++ +I YN +I G C G + A+
Sbjct: 486 --------------------TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
FC + PDV+TYNT+++ LC + L EA + + + G P+ +Y T+I+
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 379 HGDIVKAREFLLSMLEKSVVPEPH----IWNVIIDG 410
D + E + M V + + N++ DG
Sbjct: 583 DCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 131/292 (44%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
A+ L+ DM + IV +N L++ + QM G D+ TY+ +N
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
C C++ +L A + K G PD ++ +++ G C I A + M+E P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
+ + +I G S A ++ D M+ G ++ T+ ++ + G I A +L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
+M I +V +N +I + C H+ +A+ L+ EM +GI P+++TY LI C
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
G +A + + + + + + F L + + + +A +H++ + R+
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 218 bits (555), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 215/415 (51%), Gaps = 11/415 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
VI C ++ AL + KM++ G PD +T LVN C+ + A ++ +M E+
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ YNA I C+ ++ A F + GIRPN VT+ LV+ LC DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L +++ K T +VIT + L+D++ KNG +A L+ +M + +I DIV Y+ LI
Sbjct: 246 RLLSDMIKK---KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NG CL+ I A F M+ +G L DV++YNTL+N CK ++++ + +S+ G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
+ ++Y T+IQG GD+ KA+EF M + P+ +N+++ G G+L A I
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
+ M + ++ T+ +I + G + +A+SL + L G+ PD+ TY ++ C
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
G +H LY +M + G+ + T ++ G++ + E+ K+ + G A
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYA 529
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 220/447 (49%), Gaps = 8/447 (1%)
Query: 91 DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
D+ L + +D M + P + D+ R ++ I L K + L +KM G
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIV--DFNRLLSAIVKL---KKYDVVISLGKKMEVLGIR 117
Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
D+ T N ++N C + A ++ +M ++ P+ T + + G+CR N + A+ L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
M G +P+ V +N ++ +LCK + DA F E+ + +V+T T L++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNG 234
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
+ A L +DM +K I +++ Y+ L++ F NG + A F +M++ PD
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
++TY++L+N LC ++DEA+ + ++ G D +SY T+I G C + +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
M ++ +V +N +I G+ + GD+ A M FG+S +++T+N L+ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
+ A + ++M + D+ TY +I C G + A L+ + +G+ PDI+TYT
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
++ G C +G + E E ++ K++ GL
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 213/415 (51%), Gaps = 9/415 (2%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI---REMSEMRPSPNCA 189
K+ A+ L M++ P ++ N L++ + K L+K D VI ++M + +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVK---LKKYDVVISLGKKMEVLGIRNDLY 121
Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
T+N I +C ++ AL + M G P+RVT LV+ C++ + DAV + ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
+ + D++ ++DS K A + ++ +K I+ ++V Y L+NG C +
Sbjct: 182 V---EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
S A M+K+ P+VITY+ LL+ K GK+ EA + + + + PD ++Y
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
++I GLC+H I +A + M+ K + + +N +I+G+ + + + + M
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
G+ SN T+N LI + G + A +M GI PD++TYN+L+G C+ G +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
AL ++++M +R + DI+TYT +I+G C G ++EA +F + GL D + +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 175/379 (46%), Gaps = 38/379 (10%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
L A + +M + RP P+ +N ++ ++ + D + L M GIR + T NI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
+++ C + A+ LG+ M
Sbjct: 126 VINCFCCCFQVSLALSILGK--------------------------------------ML 147
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+ + D V L+NGFC +S A + +M++ G+ PD++ YN +++ LCK +++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
+A F+ + + G+ P+ ++Y ++ GLC A L M++K + P ++ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
D + + G + A + + M+ + ++ T+++LI I +A + M+ G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
DV +YN LI C + ++L+ EM +RG+ + +TY LI+G G++ +A+E
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 529 FAKIQTLGLAIDHIPFRIL 547
F+++ G++ D + IL
Sbjct: 388 FSQMDFFGISPDIWTYNIL 406
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 170/364 (46%), Gaps = 38/364 (10%)
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+L+ A+ LFS M + P+ V N L+ A+ K DV+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL--------------------KKYDVV 104
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
S G K + L + ND++ +N++IN FC +S A + +M
Sbjct: 105 ISL---------GKKMEVLGIRNDLY---------TFNIVINCFCCCFQVSLALSILGKM 146
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
LK G+ PD +T +L+N C++ ++ +A + + G PD ++Y II LC +
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
A +F + K + P + +++G S+A + M+ ++ NV T++AL
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
+ A + G + +A L +EM+ I PD+ TY+ LI C I A Q++D M+ +G
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
D+++Y LI G C +++ ++F ++ GL + + + L + + + + DKA++
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 563 IHQK 566
+
Sbjct: 387 FFSQ 390
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 210/418 (50%), Gaps = 3/418 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++ LCL GK A+ L KM++ G P+ +T+ ++N +CK G A ++R+M E
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ Y+ I G C+ LD A +LF+ M GI N +T+NIL+ C G D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L +++ K +V+T ++L+DS+ K G +A L +M + I D + Y L
Sbjct: 318 AKLLRDMIKR---KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+GFC + A M+ +G P++ T+N L+N CK ++D+ + +S GV
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
D ++Y T+IQG C G + A+E M+ + V P + +++DG G+ A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
I + + + ++ +N +I + DA+ L + L G+ P V TYN++IG C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
G + A L+ +M G PD TY LI+ H G+ ++ ++ +++ G ++D
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 209/404 (51%), Gaps = 3/404 (0%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
L L ++M KG ++ T + ++N C+ L A + ++ ++ PN T++ I
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 166
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
G C + +AL L M G +P+ +T N LV+ LC G +A+ + +++ +
Sbjct: 167 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV---EYG 223
Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
+ +T +++ K+G A+ L M ++NI+ D V Y+++I+G C +G + +AF
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
F +M +G ++ITYN L+ C G+ D+ + + K + P+ +++ +I
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
G + +A E M+ + + P+ + +IDG+ + L A + DLM+S G N+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
TFN LI + I D L ++M L G+ D TYN LI C LG +++A +L+ E
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
M+ R + P+I+TY L+ G C G ++A E+F KI+ + +D
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 219/457 (47%), Gaps = 44/457 (9%)
Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
R LCL A K+I+ G P+ +T + L+N LC G + +A ++ M EM
Sbjct: 137 RKLCL------AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
P+ T N + G C + +A+ L M G +PN VT+ +++ +CK G A++
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
L ++ ++ D + +I++D K+G A L+N+M K I T+I+ YN+LI G
Sbjct: 251 LRKM---EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
FC G M+KR P+V+T++ L++ K+GKL EA + + G+APD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
I+Y ++I G C + KA + + M+ K P +N++I+GY + + + +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
M GV ++ T+N LI G + A L +EM+ + P++ TY +L+ C+ G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 486 HIHLALQLYDEMLR-----------------------------------RGITPDIITYT 510
AL++++++ + +G+ P + TY
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
+I G C +G + EAE +F K++ G A D + IL
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 191/403 (47%), Gaps = 6/403 (1%)
Query: 171 KADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
KAD I R+M RP P ++ + + + D L L M GI N T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
I+++ C+ L A +G+++ + IT + L++ G +AL L + M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLG---YEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
+ + D++ N L+NG CL+G + A +M++ G P+ +TY +LN +CK G+
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
A + + + D + Y II GLC HG + A M K + +N++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
I G+ G + + M+ ++ NV TF+ LI + + G + +A L KEM+ GI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
PD TY LI C H+ A Q+ D M+ +G P+I T+ LI G+C + + E
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
+F K+ G+ D + + L + + + + + A+++ Q+ + R
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 184/400 (46%), Gaps = 38/400 (9%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
++ D ++ +I LC G + A L +M KG +++T+N L+ C G +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++R+M + + +PN T++ I + + +L +A L M + GI P+ +T+ L+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK+ L A + + + M K
Sbjct: 379 CKENHLDKANQMV--------------------------------------DLMVSKGCD 400
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+I +N+LING+C I F +M RG + D +TYNTL+ C+ GKL+ A
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ + V P+ ++YK ++ GLC +G+ KA E + + + + I+N+II G
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
+ +A+ + + GV V T+N +I + G + +A L ++M DG PD +T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
YN+LI A G +++L +E+ R G + D T +I
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 227/459 (49%), Gaps = 16/459 (3%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I+ + G A+ + ++M ++G PD+ +N L+ L K +++A + EM
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
E PN TY AFI+GY +E A M G+ PN+V L++ CKKG +
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A ++ D D T T+LM+ FKN A ++ +M K I D+ +Y
Sbjct: 575 EACSAYRSMV---DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
VLINGF G++ A + F +M++ G P+VI YN LL C+ G++++A +S
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ P+ ++Y TII G C GD+ +A M K +VP+ ++ ++DG R D+ A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIF-----PDVF 472
+I G +S+ FNALI + F LK E+L +DG F P+
Sbjct: 752 ITIFGTNKK-GCASSTAPFNALINWVFK----FGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
TYN++I C G++ A +L+ +M + P +ITYT L+ G+ G E VF +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
G+ DHI + ++ + + + KA + + +N
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 190/404 (47%), Gaps = 4/404 (0%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
MI G +P + L+ C+ ++ + ++ EM + + TY + G C +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
LD A ++ M +G RPN V + L+ + GDA++ L E+ + G A D+
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KEQGIA-PDIFC 489
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
L+ K +A + +M + ++ + Y I+G+ + +SA Y +M
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
+ G LP+ + L+N CK+GK+ EA Y + G+ D +Y ++ GL + +
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A E M K + P+ + V+I+G+ + G++ A SI D M+ G++ NV +N L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
R G I A L EM + G+ P+ TY +I C G + A +L+DEM +G+
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
PD YT L+ G C +++ A +F + G A PF L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNAL 772
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 200/431 (46%), Gaps = 11/431 (2%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
AL L+ MI KG VP T++ L++ LCKI LE A ++ EM + S + TY+ I
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
G + D A L M ++GI ++ + + K+G++ A DG
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF-------DGM 373
Query: 257 ATSDVITST----ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
S +I L++ Y + + Q L +M ++NI Y ++ G C +GD+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A+ +M+ G P+V+ Y TL+ + + +A + + G+APD Y ++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I GL + +AR FL+ M+E + P + I GY + ++A M GV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
N LI + G + +A S + M+ GI D TY +L+ + A +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
++ EM +GI PD+ +Y LI G GNM++A +F ++ GL + I + +L +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 553 RMKESDKARDI 563
R E +KA+++
Sbjct: 674 RSGEIEKAKEL 684
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 222/476 (46%), Gaps = 8/476 (1%)
Query: 93 ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
+L + L ++K + D + +++ D + +I L G A L +M+
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G ++ + + K G +EKA + M P Y + I GYCR + +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
L M I + T+ +V +C G L A + E++A +V+ T L
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTL 458
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+ ++ +N A+ + +M ++ I DI YN LI G + A ++ +M++ G
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
P+ TY ++ + + A + + + GV P+++ +I C G +++A
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
SM+++ ++ + + V+++G + + +A I M G++ +VF++ LI +
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
+ G++ A S+ EM+ +G+ P+V YN+L+G C G I A +L DEM +G+ P+ +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
TY +I G+C G++ EA +F +++ GL D + L R+ + ++A I
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 200/443 (45%), Gaps = 29/443 (6%)
Query: 101 LKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
+K MR+ G V CT +I + C GK+ A R M+ +G + D T+
Sbjct: 545 VKEMRECGVLPNKVLCT---------GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
L+N L K ++ A+ + REM +P+ +Y I G+ ++ + KA +F M
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
G+ PN + +N+L+ C+ G + A + L E+ + +T ++D Y K+GD
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG---LHPNAVTYCTIIDGYCKSGD 712
Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
+A L+++M K + D Y L++G C D+ A F K+G +N
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNA 771
Query: 337 LLNCLCKQGKLDEASHFY-----GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
L+N + K GK + + G + G P+ ++Y +I LC G++ A+E
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
M +++P + +++GY + G + F + D ++ G+ + ++ +I A + G
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 452 IFDAFSLKKEMLL-----DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
A L +M DG + T L+ +G + +A ++ + M+R PD
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 507 ITYTELIKGHCARGNMK-EAEEV 528
T ELI C N + EA+ V
Sbjct: 951 ATVIELINESCISSNQRVEADAV 973
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 187/426 (43%), Gaps = 19/426 (4%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEMRPSPNCATYNAFITGYCR 200
+ M+++ V DV T++ L+ C+ G+++ V+ + E R AT N
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT----ATLN-------- 257
Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
+D AL L +M G+ P + T+++L+ LCK L DA L E+ D + D
Sbjct: 258 ---VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM---DSLGVSLD 311
Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
T ++L+D K + A L ++M I Y+ I G + A A F
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
M+ G +P Y +L+ C++ + + + K + +Y T+++G+C G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
D+ A + M+ P I+ +I + + +A + M G++ ++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
+LI+ ++ + +A S EM+ +G+ P+ FTY I A + EM
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
G+ P+ + T LI +C +G + EA + + G+ D + +L + + D A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 561 RDIHQK 566
+I ++
Sbjct: 612 EEIFRE 617
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 190/475 (40%), Gaps = 78/475 (16%)
Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT--------- 196
QK T + + ++L +LC G EKA V+ M E R P +++ +
Sbjct: 90 QKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE-RNWPVAEVWSSIVRCSQEFVGKS 148
Query: 197 -----------GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---LLGDA 242
GY +++A+ +FS+ + P +L+ AL + L D
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208
Query: 243 VKFLGEVLADDDGKATSDVITS-------TILMDSYFKNGDKFQ--------ALALWNDM 287
K + E D K +I + + D FK +F+ AL L M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-------- 339
K + Y+VLI+G C + A + +M G D TY+ L++
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 340 ------------------------CLC---KQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
C+C K+G +++A + + +G+ P +Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I+G C ++ + E L+ M ++++V P+ + ++ G GDL A++I M++ G
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
NV + LI + DA + KEM GI PD+F YN LI + A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
EM+ G+ P+ TY I G+ A++ +++ G+ +P ++L
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV----LPNKVL 559
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 120/309 (38%), Gaps = 49/309 (15%)
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
D V + +L +G+ G I A F + +P + LL+ L + +LD Y
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+ + V D +Y +I C G++ ++ L EK E + +DG
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EK----EFRTATLNVDG---- 260
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
A +++ M+ G+ +T++ LI + + DA SL EM G+ D TY
Sbjct: 261 -----ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315
Query: 475 NLLI-------GASCNLGHIH----------------------------LALQLYDEMLR 499
+LLI A G +H A L+D M+
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
G+ P Y LI+G+C N+++ E+ +++ + I + + K + D
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 560 ARDIHQKWL 568
A +I ++ +
Sbjct: 436 AYNIVKEMI 444
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 213/435 (48%), Gaps = 4/435 (0%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I LC+ +I A+ L KM P V T+ L+ LC +A ++++EM
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
E PN TY I C + +KA L M G+ PN +T+N L++ CK+G++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
DAV + E++ + K + + T L+ Y K+ + +A+ + N M ++ + D+V YN
Sbjct: 411 DAVDVV-ELM--ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
LI+G C +G+ SA+ M RG +PD TY ++++ LCK +++EA + L +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
GV P+ + Y +I G C G + +A L ML K+ +P +N +I G G L A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
+ + M+ G+ V T LI + G A+S ++ML G PD TY I
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
C G + A + +M G++PD+ TY+ LIKG+ G A +V +++ G
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 541 HIPFRILKKRYRRMK 555
F L K MK
Sbjct: 707 QHTFLSLIKHLLEMK 721
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 228/435 (52%), Gaps = 17/435 (3%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
+M++ P++ T+N +VN CK+G++E+A+ + ++ E P+ TY + I GYC+
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+LD A +F+ M G R N V + L+H LC + +A+ + + DD+ T V
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK-MKDDECFPT--VR 324
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T T+L+ S + K +AL L +M + I+ +I Y VLI+ C A QM
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
L++G +P+VITYN L+N CK+G +++A ++ ++P+ +Y +I+G C ++
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNV 443
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
KA L MLE+ V+P+ +N +IDG R G+ +A+ + LM G+ + +T+ ++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
I + + + +A L + G+ P+V Y LI C G + A + ++ML +
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL----AIDHIPF-RILK--------K 549
P+ +T+ LI G CA G +KEA + K+ +GL + D I R+LK
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 550 RYRRMKESDKARDIH 564
R+++M S D H
Sbjct: 624 RFQQMLSSGTKPDAH 638
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 235/487 (48%), Gaps = 28/487 (5%)
Query: 96 ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
E L+ +K M +TG ++ + + +I LC K A L +M++KG +P+V+T
Sbjct: 341 EALNLVKEMEETG-----IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
+N L+N CK G +E A V+ M + SPN TYN I GYC+ N + KA+ + + M
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
+ P+ VT+N L+ C+ G A + L L +D G D T T ++DS K+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS--LMNDRG-LVPDQWTYTSMIDSLCKSK 511
Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
+A L++ + QK + ++V Y LI+G+C G + A +ML + LP+ +T+N
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
L++ LC GKL EA+ + K G+ P + +I L GD A ML
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
P+ H + I Y R G L +A + M GVS ++FT+++LI G A
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 456 FSLKKEMLLDGIFPDVFTYNLLIG------------------ASCNLGHIHLALQLYDEM 497
F + K M G P T+ LI A N+ ++L ++M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ-TLGLAIDHIPFRILKKRYRRMKE 556
+ +TP+ +Y +LI G C GN++ AE+VF +Q G++ + F L ++K+
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 557 SDKARDI 563
++A +
Sbjct: 812 HNEAAKV 818
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 188/381 (49%), Gaps = 4/381 (1%)
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
YN + R +D+ ++ M + + PN T+N +V+ CK G + +A +++ +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
+ D T T L+ Y + D A ++N+M K + + VAY LI+G C+
Sbjct: 246 ---EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
I A F +M P V TY L+ LC + EA + + +TG+ P+ +Y
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
+I LC KARE L MLEK ++P +N +I+GY + G + +A + +LM S
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
+S N T+N LI + ++ A + +ML + PDV TYN LI C G+ A
Sbjct: 423 KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
+L M RG+ PD TYT +I C ++EA ++F ++ G+ + + + L
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 551 YRRMKESDKARDIHQKWLLRN 571
Y + + D+A + +K L +N
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKN 562
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 16/337 (4%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I LC GK+ A L KM++ G P V T L++ L K GD + A ++M
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA---LCKKGLL 239
P+ TY FI YCR L A + + M NG+ P+ T++ L+ L +
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN------------DM 287
D +K + + + +I + M + G + + A+ N M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGK 346
+ ++ + +Y LI G C G++ A F M + G P + +N LL+C CK K
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
+EA+ + G P S K +I GL G+ + ++L+ + W +
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871
Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
IIDG G+ G + + + ++M G + T++ LI
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 120/294 (40%), Gaps = 25/294 (8%)
Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
R + M +G + D + I+ C G++ A + KM + G PD+ T++ L
Sbjct: 624 RFQQMLSSGT-----KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT------------------GYCRV 201
+ +G A V++ M + P+ T+ + I +
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
E D + L M + + PN ++ L+ +C+ G L A K + ++G + S++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH-MQRNEGISPSEL 797
Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
+ + L+ K +A + +DM + + VLI G G+ + F
Sbjct: 798 VFNA-LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
+L+ G+ D + + +++ + KQG ++ + V+ K G +Y +I+G
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 223/444 (50%), Gaps = 10/444 (2%)
Query: 88 NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
+ LD +L EN ++ M R E + + +++ LC K+ A L +M K
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G PD +++ +++ +C++G +++ RE++E R P + YNA I G C+ ++ A
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEG----RELAE-RFEPVVSVYNALINGLCKEHDYKGA 265
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
L M GI PN ++++ L++ LC G + A FL ++L ++ T + L
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG---CHPNIYTLSSL 322
Query: 268 MDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
+ F G F AL LWN M + +Q ++VAYN L+ GFC +G+I A + F M + G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
P++ TY +L+N K+G LD A + + + +G P+ + Y +++ LC H +A
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILA 445
+ M +++ P +N I G G L A + R + N+ T+N L+
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
+ I +A+ L +E+ + G+ TYN L+ SCN G +ALQL +M+ G +PD
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 506 IITYTELIKGHCARGNMKEAEEVF 529
IT +I +C +G + A ++
Sbjct: 563 EITMNMIILAYCKQGKAERAAQML 586
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 215/479 (44%), Gaps = 48/479 (10%)
Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
++V R + L + A+ + ++ + G P V +N++++ L ++ V R+M
Sbjct: 118 ISVYRQVGLAER---AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 174
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
PN TYN + C+ N++D A L M+N G P+ V++ ++ ++C+ GL+ +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
G LA+ + V L++ K D A L +M +K I ++++Y+
Sbjct: 235 -----GRELAE---RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-CLCKQGKLDEASHFYGVLSKT 360
LIN C +G I AF++ QMLKRG P++ T ++L+ C + D + ++
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ P+ ++Y T++QG C HG+IVKA M E P + +I+G+ + G L A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM------------------ 462
I + ML+ G NV + ++ A R +A SL + M
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 463 LLDG--------IF----------PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
L D +F P++ TYN L+ I A L E+ RG+
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
TY L+ G C G A ++ K+ G + D I ++ Y + ++++A +
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 189/412 (45%), Gaps = 9/412 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+IR L + G++ + +L ++M +G +++ ++G E+A + + E
Sbjct: 81 VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ YN + N + ++ M +G PN T+N+L+ ALCK + A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L E+ + D ++ T ++ S + G L + + + YN L
Sbjct: 201 KKLLVEM---SNKGCCPDAVSYTTVISSMCEVG-----LVKEGRELAERFEPVVSVYNAL 252
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
ING C D AF +M+++G P+VI+Y+TL+N LC G+++ A F + K G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAF 421
P+ + ++++G + G A + M+ + P +N ++ G+ G++ A
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
S+ M G S N+ T+ +LI + GS+ A + +ML G P+V Y ++ A
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
C A L + M + P + T+ IKG C G + AE+VF +++
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 206/472 (43%), Gaps = 63/472 (13%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV-IREMSEMRP--SPNCA 189
K G +L L+ +QK +P VL N VN L E +H I+E+ ++ +C
Sbjct: 4 KEGCSLLLK---VQKPLIPFVLNTNLNVNHLLT----ESPNHAEIKELDVVKRLRQESCV 56
Query: 190 TYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
ALH F ++AN N + +T +++ L G + D+V++L +
Sbjct: 57 PL---------------ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQV-DSVQYLLQ 100
Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
+ + D+ S I Y + G +A+ ++ + + + YN +++
Sbjct: 101 QMKLQGFHCSEDLFISVI--SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 158
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
I + + M + GF P+V TYN LL LCK K+D A +S G PD +S
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218
Query: 369 YKTIIQ------------------------------GLCIHGDIVKAREFLLSMLEKSVV 398
Y T+I GLC D A E + M+EK +
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
P ++ +I+ G + AFS ML G N++T ++L+ G+ FDA L
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 459 KKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
+M+ G+ P+V YN L+ C+ G+I A+ ++ M G +P+I TY LI G
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDKARDIHQK 566
RG++ A ++ K+ T G + + + + + R+ + KE++ +I K
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 145/326 (44%), Gaps = 38/326 (11%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
++++ L G AL L +MI+ G P+V+ +N LV C G++ KA V M E
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
+ SPN TY + I G+ + LD A+++++ M +G PN V + +V ALC+ +
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 242 AVKFLGEVLADDD----------------------------------GKATSDVITSTIL 267
A + E+++ ++ + +++T L
Sbjct: 441 AESLI-EIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL 499
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+D K +A L ++F + ++ YN L++G C G A +M+ G
Sbjct: 500 LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK 559
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLS--KTGVAPDQISYKTIIQGLCIHGDIVKA 385
PD IT N ++ CKQGK + A+ ++S + PD ISY +I GLC
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGY 411
L M+ +VP W+V+I+ +
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCF 645
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSE 181
A I+ LC G++ A + R+M Q+ P +++T+N L++ L K +E+A + RE+
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
+ +TYN + G C AL L M +G P+ +T N+++ A CK+G
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
A + L ++++ K DVI+ T ++ ++ + + L M I I ++V
Sbjct: 582 AAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 302 LINGFCLNGDISSAFAYF 319
LIN F L+ DI A F
Sbjct: 641 LINCFILD-DIVRAHDQF 657
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 210/418 (50%), Gaps = 3/418 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A++ LCL GK+ A+ L +M++ G P+ +T+ ++ +CK G A ++R+M E
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ + Y+ I G C+ LD A +LF+ M G + + + + L+ C G D
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L +++ K T DV+ + L+D + K G +A L +M Q+ I D V Y L
Sbjct: 302 AKLLRDMIKR---KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+GFC + A M+ +G P++ T+N L+N CK +D+ + +S GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
D ++Y T+IQG C G + A+E M+ + V P+ + +++DG G+ A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
I + + + ++ +N +I + DA+ L + L G+ PDV TYN++IG C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
G + A L+ +M G +P+ TY LI+ H G+ ++ ++ +I+ G ++D
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 207/404 (51%), Gaps = 3/404 (0%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
L L ++M KG ++ T + ++N C+ L A + ++ ++ P+ T++ I
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
G C + +AL L M G +P +T N LV+ LC G + DAV + ++ + G
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV--ETGF 208
Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
++V +L K+G A+ L M ++ I+ D V Y+++I+G C +G + +AF
Sbjct: 209 QPNEVTYGPVL-KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
F +M +GF D+I Y TL+ C G+ D+ + + K + PD +++ +I
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
G + +A E M+++ + P+ + +IDG+ + L A + DLM+S G N+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
TFN LI + I D L ++M L G+ D TYN LI C LG + +A +L+ E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
M+ R + PDI++Y L+ G C G ++A E+F KI+ + +D
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 38/454 (8%)
Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
C K+ A K+I+ G PD +T + L+N LC G + +A ++ M EM P
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
T NA + G C ++ A+ L M G +PN VT+ ++ +CK G A++ L +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
+ ++ K D + +I++D K+G A L+N+M K + DI+ Y LI GFC
Sbjct: 238 M---EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
G M+KR PDV+ ++ L++C K+GKL EA + + + G++PD ++
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
Y ++I G C + KA L M+ K P +N++I+GY + + + + M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
GV ++ T+N LI G + A L +EM+ + PD+ +Y +L+ C+ G
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 489 LALQLYDEMLR-----------------------------------RGITPDIITYTELI 513
AL++++++ + +G+ PD+ TY +I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
G C +G++ EA+ +F K++ G + + + IL
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 184/407 (45%), Gaps = 40/407 (9%)
Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
I D+++ D V +EM+ RP P ++ + R + D L L M GI N
Sbjct: 48 IVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNL 107
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
T +I+++ C+ L A +G+++
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKII--------------------------------- 134
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
+ + D V ++ LING CL G +S A +M++ G P +IT N L+N LC
Sbjct: 135 -----KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
GK+ +A + +TG P++++Y +++ +C G A E L M E+ + +
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
+++IIDG + G L NAF++ + M G +++ + LI G D L ++M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
I PDV ++ LI G + A +L+ EM++RGI+PD +TYT LI G C +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
+A + + + G + F IL Y + D ++ +K LR
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 160/323 (49%), Gaps = 3/323 (0%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +IR C G+ L R MI++ PDV+ + L++ K G L +A+ + +EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ SP+ TY + I G+C+ N+LDKA H+ M + G PN T NIL++ CK L+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
D ++ ++ +D +T L+ + + G A L+ +M + ++ DIV+Y
Sbjct: 405 DGLELFRKMSLRG---VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+L++G C NG+ A F ++ K D+ YN +++ +C K+D+A + L
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
GV PD +Y +I GLC G + +A M E P +N++I + GD + +
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 421 FSIRDLMLSFGVSSNVFTFNALI 443
+ + + G S + T ++
Sbjct: 582 AKLIEEIKRCGFSVDASTVKMVV 604
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
+ +E D + +I +C K+ A L + KG PDV T+N ++ LCK G L
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+AD + R+M E SPN TYN I + + K+ L + G + T ++V
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Query: 231 HAL 233
L
Sbjct: 605 DML 607
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 204/396 (51%), Gaps = 7/396 (1%)
Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
+E YR +I L L K A+ L +M+Q+G P+++T+ +VN LCK GD+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+ A +++ +M + N Y+ I C+ D AL+LF+ M N G+RPN +T++ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC DA + L +++ + K +V+T L+D++ K G +A L+++M +
Sbjct: 302 ISCLCNYERWSDASRLLSDMI---ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++I DI Y+ LINGFC++ + A F M+ + P+V+TYNTL+N CK ++DE
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ +S+ G+ + ++Y T+I G D A+ M+ V P +N ++D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
G + G L A + + + + ++T+N +I + G + D + L + L G+ P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
DV YN +I C G A L+ +M G PD
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 220/443 (49%), Gaps = 3/443 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C +I AL L KM++ G P ++T + L+N C + A ++ +M EM
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ T+ I G N+ +A+ L M G +PN VT+ ++V+ LCK+G + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ A K ++V+ + ++DS K + AL L+ +M K ++ +++ Y+ LI
Sbjct: 246 NLLNKMEA---AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C S A M++R P+V+T+N L++ K+GKL EA Y + K +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +Y ++I G C+H + +A+ M+ K P +N +I+G+ + + +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M G+ N T+ LI + +A + K+M+ DG+ P++ TYN L+ C
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + A+ +++ + R + P I TY +I+G C G +++ ++F + G+ D I
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 544 FRILKKRYRRMKESDKARDIHQK 566
+ + + R ++A + +K
Sbjct: 543 YNTMISGFCRKGLKEEADALFRK 565
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 226/466 (48%), Gaps = 15/466 (3%)
Query: 72 FSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG 131
F +++ +GNP+ +++DL M G + DYR ++R+
Sbjct: 16 FVHRNLQGKGNPRIAPSSIDLC---------GMCYWGRAFSSGSGDYRE---ILRNGLHS 63
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
K+ A+ L M++ +P + N L++ + K+ + + +M + S N TY
Sbjct: 64 MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY 123
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
N I +CR +++ AL L M G P+ VT + L++ C + DAV + +++
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV- 182
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+ D IT T L+ F + +A+AL + M Q+ Q ++V Y V++NG C GD
Sbjct: 183 --EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
I AF +M +V+ Y+T+++ LCK D+A + + + GV P+ I+Y +
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
+I LC + A L M+E+ + P +N +ID + + G L A + D M+
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
+ ++FT+++LI + +A + + M+ FP+V TYN LI C I +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
+L+ EM +RG+ + +TYT LI G + A+ VF ++ + G+
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 181/407 (44%), Gaps = 42/407 (10%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
L+ A + M + RP P+ +N ++ ++ + D + L M GI N T+NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
L++ C++ + ALAL M
Sbjct: 126 LINCFCRRSQIS--------------------------------------LALALLGKMM 147
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+ + IV + L+NG+C IS A A QM++ G+ PD IT+ TL++ L K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
EA + + G P+ ++Y ++ GLC GDI A L M + I++ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
D + +A ++ M + GV NV T+++LI DA L +M+ I
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
P+V T+N LI A G + A +LYDEM++R I PDI TY+ LI G C + EA+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
F + + + + + L + + K D+ R++ Q+ L+ N
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 82 NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V FNAL D +KE L + + D ++ +++ D + ++I C+ ++ A
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ MI K P+V+T+N L+N CK +++ + REMS+ N TY I G+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ + D A +F M ++G+ PN +T+N L+ LC
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC------------------------ 481
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
KNG +A+ ++ + + ++ I YN++I G C G + +
Sbjct: 482 --------------KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
FC + +G PDVI YNT+++ C++G +EA + + + G PD
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
LC GK+ A+ + + + P + T+N ++ +CK G +E + +S P+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
YN I+G+CR ++A LF M +G P+ T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R +E + +I +C GK+ L + KG PDV+ +N +++ C+ G E
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 171 KADHVIREMSEMRPSPNCAT 190
+AD + R+M E P P+ T
Sbjct: 558 EADALFRKMREDGPLPDSGT 577
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 217/438 (49%), Gaps = 6/438 (1%)
Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
+R + G++ M+ G VPD++ L+ C++G KA ++ +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
P+ TYN I+GYC+ E++ AL + M+ + P+ VT+N ++ +LC G L A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
L +L D DVIT TIL+++ ++ A+ L ++M + D+V YNVL+N
Sbjct: 226 VLDRMLQRD---CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
G C G + A + M G P+VIT+N +L +C G+ +A + + G +P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
+++ +I LC G + +A + L M + P +N ++ G+ + + A
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
+ M+S G ++ T+N ++ A + G + DA + ++ G P + TYN +I
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
G A++L DEM + + PD ITY+ L+ G G + EA + F + + +G+ + + F
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 545 RILKKRYRRMKESDKARD 562
+ + +++D+A D
Sbjct: 523 NSIMLGLCKSRQTDRAID 540
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 199/392 (50%), Gaps = 3/392 (0%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R ++ D + ++R LC GK+ A+ + +M+Q+ PDV+T+ L+ C+ +
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
A ++ EM + +P+ TYN + G C+ LD+A+ + M ++G +PN +THNI++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
++C G DA K L ++L + V+T IL++ + G +A+ + M Q
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKG---FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
Q + ++YN L++GFC + A Y +M+ RG PD++TYNT+L LCK GK+++A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
LS G +P I+Y T+I GL G KA + L M K + P+ ++ ++ G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
R G + A G+ N TFN+++L + A M+ G P+
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553
Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
+Y +LI G AL+L +E+ +G+
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 195/396 (49%), Gaps = 6/396 (1%)
Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
+IR C GK A + + G VPDV+T+N +++ CK G++ A V+ MS
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
SP+ TYN + C +L +A+ + M P+ +T+ IL+ A C+ +G
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
A+K L E+ D T DV+T +L++ K G +A+ NDM Q +++ +N+
Sbjct: 258 AMKLLDEM---RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
++ C G A ML++GF P V+T+N L+N LC++G L A + + G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
P+ +SY ++ G C + +A E+L M+ + P+ +N ++ + G + +A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
I + + S G S + T+N +I + G A L EM + PD TY+ L+G
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
G + A++ + E R GI P+ +T+ ++ G C
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 202/414 (48%), Gaps = 6/414 (1%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C G+I AL + +M PDV+T+N ++ LC G L++A V+ M +
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ TY I CR + + A+ L M + G P+ VT+N+LV+ +CK+G L +A+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
KFL ++ + +VIT I++ S G A L DM +K +V +N+LI
Sbjct: 295 KFLNDMPSSG---CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
N C G + A +M + G P+ ++YN LL+ CK+ K+D A + + G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD ++Y T++ LC G + A E L + K P +N +IDG + G A +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
D M + + + T+++L+ +R G + +A E GI P+ T+N ++ C
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
A+ M+ RG P+ +YT LI+G G KEA E+ ++ GL
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 203/409 (49%), Gaps = 7/409 (1%)
Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
DV ++N+L ++ + G+LE+ + M P+ I G+CR+ + KA +
Sbjct: 102 DVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
+ +G P+ +T+N+++ CK G + +A+ L D + DV+T ++ S
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVL------DRMSVSPDVVTYNTILRSL 214
Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
+G QA+ + + M Q++ D++ Y +LI C + + A +M RG PDV
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
+TYN L+N +CK+G+LDEA F + +G P+ I++ I++ +C G + A + L
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
ML K P +N++I+ R G L A I + M G N ++N L+ +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
+ A + M+ G +PD+ TYN ++ A C G + A+++ +++ +G +P +ITY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
+I G G +A ++ +++ L D I + L R + D+A
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 5/287 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
H ++R +C G+ A L M++KG P V+T N L+N LC+ G L +A ++ +M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ PN +YN + G+C+ ++D+A+ M + G P+ VT+N ++ ALCK G +
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
DAV+ L ++ K S V IT ++D K G +A+ L ++M K+++ D + Y
Sbjct: 432 DAVEILNQL----SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
+ L+ G G + A +F + + G P+ +T+N+++ LCK + D A F +
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
G P++ SY +I+GL G +A E L + K ++ + V
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 186/391 (47%), Gaps = 24/391 (6%)
Query: 198 YCRVNELDKALHLFSTMANN---GIRP-NRVTHNILVHALCK---KGLLGDAVKF--LGE 248
Y R N+LD + ++++ G R NR+ +LV A K GL G A KF L
Sbjct: 24 YKRGNKLDVSCRTSGSISSKIPLGSRKRNRL---VLVSAASKVESSGLNGRAQKFETLSS 80
Query: 249 VLADDDGKATSDVITSTILMDSYFKN---------GDKFQALALWNDMFQKNIQTDIVAY 299
++ +G + S+ ++ N G+ + +M DI+
Sbjct: 81 GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPC 140
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
LI GFC G A + G +PDVITYN +++ CK G+++ A VL +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDR 197
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
V+PD ++Y TI++ LC G + +A E L ML++ P+ + ++I+ R + +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
A + D M G + +V T+N L+ + G + +A +M G P+V T+N+++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
+ C+ G A +L +MLR+G +P ++T+ LI C +G + A ++ K+ G
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
+ + + L + + K+ D+A + ++ + R
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 209/442 (47%), Gaps = 7/442 (1%)
Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
LE+D+R + I+ +G L L +M P V +N L++ LCK +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
A+ + EM R P+ TYN I GYC+ +K+ + M + I P+ +T N L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ L K G++ DA L E+ D D T +IL D Y N AL ++
Sbjct: 291 LKGLFKAGMVEDAENVLKEM---KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++ + ++L+N C G I A + + +G +P+ + YNT+++ C++G L
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A + K G+ PD ++Y +I+ C G++ A + + M K V P +N++I
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
GYGR + F I M G NV ++ LI +G + +A +K++M G+ P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
V YN+LI C+ G I A + EML++GI +++TY LI G G + EAE++
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 530 AKIQTLGLAIDHIPFRILKKRY 551
+I GL D + L Y
Sbjct: 588 LEISRKGLKPDVFTYNSLISGY 609
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 213/410 (51%), Gaps = 4/410 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I C G + +R +M P ++T N L+ L K G +E A++V++EM ++
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ T++ GY + + AL ++ T ++G++ N T +IL++ALCK+G + A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ LG +A G ++VI +T ++D Y + GD A M ++ ++ D +AYN L
Sbjct: 374 EEILGREMAK--GLVPNEVIYNT-MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I FC G++ +A +M +G P V TYN L+ ++ + D+ + G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P+ +SY T+I LC +++A+ M ++ V P+ I+N++IDG G + +AF
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
ML G+ N+ T+N LI + G + +A L E+ G+ PDVFTYN LI
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
G++ + LY+EM R GI P + TY LI C + ++ E +F ++
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM 659
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 195/412 (47%), Gaps = 11/412 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I C G + A M ++G PD L +N L+ C++G++E A+ + +M
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
SP+ TYN I GY R E DK + M +NG PN V++ L++ LCK L +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 243 VKFLGEVLADD--DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+++ D D + V +L+D G A +M +K I+ ++V YN
Sbjct: 514 -----QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
LI+G + G +S A ++ ++G PDV TYN+L++ G + Y + ++
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ P +Y +I LC I M S+ P+ ++N ++ Y GD+ A
Sbjct: 629 GIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKA 684
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
F+++ M+ + + T+N+LIL + + G + + SL EM + P+ TYN+++
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
C + A Y EM +G D+ EL+ G KEAE V +++
Sbjct: 745 HCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 165/360 (45%), Gaps = 3/360 (0%)
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
+ +A LF + N GI P+ + +L+ L K + +L + D + + +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL-ESDFRPSKFMYG 183
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
I + K D + L L+N M I + YNVLI+G C ++ A F +ML
Sbjct: 184 KAI--QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
R LP +ITYNTL++ CK G +++ + + P I++ T+++GL G +
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A L M + VP+ ++++ DGY A + + + GV N +T + L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
A + G I A + + G+ P+ YN +I C G + A + M ++G+
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
PD + Y LI+ C G M+ AE+ K++ G++ + IL Y R E DK DI
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 134/306 (43%)
Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
T+L+D K + ++ ++ + + + Y I D+ F +M
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207
Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
P V YN L++ LCK ++++A + + + P I+Y T+I G C G+ K
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267
Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
+ + M + P +N ++ G + G + +A ++ M G + FTF+ L
Sbjct: 268 SFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327
Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
+ A + + + G+ + +T ++L+ A C G I A ++ + +G+ P
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
+ + Y +I G+C +G++ A ++ G+ DH+ + L +R+ + E + A
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 565 QKWLLR 570
K L+
Sbjct: 448 NKMKLK 453
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 19/267 (7%)
Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL-DEASHFYGVLSKTGVAP 364
F ++ SAF+ LK F +Y LL+ L + K+ EA+ + L G+ P
Sbjct: 89 FASPKELFSAFSLSSPSLKHDF-----SY-LLLSVLLNESKMISEAADLFFALRNEGIYP 142
Query: 365 DQISYKTIIQGLCIHGDIVKAREF------LLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
S ++ L VK ++F L++LE P ++ I + D+
Sbjct: 143 SSDSLTLLLDHL------VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
+ + M + +VF +N LI +G + DA L EML + P + TYN LI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
C G+ + ++ + M I P +IT+ L+KG G +++AE V +++ LG
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQ 565
D F IL Y ++++ A +++
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYE 343
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 113/237 (47%), Gaps = 7/237 (2%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E + + +I L + GK+ A L ++ +KG PDV T+N L++ G++++
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM P TY+ I+ C ++ LF M+ ++P+ + +N ++H
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCY 675
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
G + A +++ G D T L+ K G + +L ++M + ++
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIG---LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
+ YN+++ G C D SA+ ++ +M ++GFL DV N L++ L ++ + EA
Sbjct: 733 PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
+L+ D + V+ + G + A L+++MI+K D T+N L+ K+G L +
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
+I EM+ P TYN + G+C V + A + M G + N LV
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Query: 233 LCKKGLLGDAV--------KFLGEVLADDDGKATSDV 261
L ++ +A + LG+V D+D AT +
Sbjct: 780 LKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSATEKL 816
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 211/440 (47%), Gaps = 15/440 (3%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
K ++ L M+ G ++ D + +I DLC +I L R M ++ P+
Sbjct: 244 FKAAIELLDHMKSKG-----VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
+T+N L+N G + A ++ EM SPN T+NA I G+ +AL +F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
M G+ P+ V++ +L+ LCK A F + +G IT T ++D K
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM--KRNGVCVGR-ITYTGMIDGLCK 415
Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
NG +A+ L N+M + I DIV Y+ LINGFC G +A C++ + G P+ I
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475
Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
Y+TL+ C+ G L EA Y + G D ++ ++ LC G + +A EF+ M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
++P ++ +I+GYG G+ AFS+ D M G FT+ +L+ +GG +
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
+A K + D YN L+ A C G++ A+ L+ EM++R I PD TYT LI
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 514 KGHCARGNM-------KEAE 526
G C +G KEAE
Sbjct: 656 SGLCRKGKTVIAILFAKEAE 675
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 208/424 (49%), Gaps = 3/424 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I LC G + +L +KM + G P ++T+N +++ CK G + A ++ M
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
+ TYN I CR N + K L M I PN VT+N L++ +G + A
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L E+L+ + + +T L+D + G+ +AL ++ M K + V+Y VL+
Sbjct: 319 QLLNEMLSFG---LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G C N + A ++ +M + G ITY +++ LCK G LDEA +SK G+
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD ++Y +I G C G A+E + + + P I++ +I R G L A I
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
+ M+ G + + FTFN L+ + + G + +A + M DGI P+ +++ LI N
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G A ++DEM + G P TY L+KG C G+++EAE+ + + A+D +
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 544 FRIL 547
+ L
Sbjct: 616 YNTL 619
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 12/401 (2%)
Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
+V D+L YL + G ++ + + R M +P+ T NA + + E
Sbjct: 124 SVYDILIRVYL-----REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
M I P+ T NIL++ LC +G + + ++ + G A + V +T+L
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM--EKSGYAPTIVTYNTVL- 235
Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
Y K G A+ L + M K + D+ YN+LI+ C + I+ + M KR
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
P+ +TYNTL+N +GK+ AS + G++P+ +++ +I G G+ +A +
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCG--DLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
M K + P + V++DG + DL+ F +R M GV T+ +I
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR--MKRNGVCVGRITYTGMIDGL 413
Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
+ G + +A L EM DGI PD+ TY+ LI C +G A ++ + R G++P+
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473
Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
I Y+ LI C G +KEA ++ + G DH F +L
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 188/436 (43%), Gaps = 57/436 (13%)
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+ A H+++E+S M + + A +T Y N N ++IL
Sbjct: 89 DPARHILKELSLM-SGKSSFVFGALMTTYRLCNS------------------NPSVYDIL 129
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ ++G++ D+++ L G S V T ++ S K+G+ + +M +
Sbjct: 130 IRVYLREGMIQDSLEIFR--LMGLYGFNPS-VYTCNAILGSVVKSGEDVSVWSFLKEMLK 186
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
+ I D+ +N+LIN C G + +M K G+ P ++TYNT+L+ CK+G+
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A + GV D +Y +I LC I K L M ++ + P +N +I+
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
G+ G + A + + MLSFG+S N TFNALI G+ +A + M G+ P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 470 DVFTYNLL-----------------------------------IGASCNLGHIHLALQLY 494
+Y +L I C G + A+ L
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
+EM + GI PDI+TY+ LI G C G K A+E+ +I +GL+ + I + L RM
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 555 KESDKARDIHQKWLLR 570
+A I++ +L
Sbjct: 487 GCLKEAIRIYEAMILE 502
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 222/484 (45%), Gaps = 41/484 (8%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++++ LC GG + A + + D + +N L+ +CK G+L KA + EM +
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFS--TMANNGIRPNRVTHNILVHALCKKGLLG 240
P+ TY + I+G CR + A+ LF+ A + PN+V + V + K G
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+ F ++ D+ T D++T+ ++D Y + G + L +M +N ++ YN
Sbjct: 702 AGIYFREQM---DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+L++G+ D+S++F + ++ G LPD +T ++L+ +C+ L+
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818
Query: 361 GVAPDQISYKTIIQGLCIHG------DIVK-----------------------------A 385
GV D+ ++ +I C +G D+VK +
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
R L M ++ + PE + +I+G R GD+ AF +++ M++ + +A++ A
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
+ G +A L + ML + P + ++ L+ C G++ AL+L M G+ D
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
+++Y LI G CA+G+M A E++ +++ G + ++ L + + + DI
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Query: 566 KWLL 569
K LL
Sbjct: 1059 KDLL 1062
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 224/455 (49%), Gaps = 31/455 (6%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
V++ C +I +AL L R M + G VP+ + + L++ L K + +A ++ EM M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ T+N I G C+ + +++A + + M G P+ +T+ L++ LCK G + DA
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV-DA 340
Query: 243 VK--------------------FLGEVLADDDGKATSDVITS----------TILMDSYF 272
K F+ DD SD++TS L+ Y+
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
K G AL + +DM K + ++ +Y +L++GFC G I A+ +M G P+ +
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
+N L++ CK+ ++ EA + + + G PD ++ ++I GLC +I A L M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
+ + VV +N +I+ + R G++ A + + M+ G + T+N+LI R G +
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
A SL ++ML DG P + N+LI C G + A++ EM+ RG TPDI+T+ L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
I G C G +++ +F K+Q G+ D + F L
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 220/440 (50%), Gaps = 10/440 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
VI LC +I A + +M+ +G PD +T+ YL+N LCKIG ++ A + +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---- 348
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
P P +N I G+ LD A + S M + GI P+ T+N L++ K+GL+G A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 243 VKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
+ EVL D K +V + TIL+D + K G +A + N+M ++ + V +N
Sbjct: 409 L----EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
LI+ FC I A F +M ++G PDV T+N+L++ LC+ ++ A + G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
V + ++Y T+I G+I +AR+ + M+ + + +N +I G R G++ A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
S+ + ML G + + + N LI R G + +A +KEM+L G PD+ T+N LI
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
C G I L ++ ++ GI PD +T+ L+ C G + +A + + G +H
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 542 IPFRILKKRYRRMKESDKAR 561
+ IL + + D+ R
Sbjct: 705 RTWSILLQSIIPQETLDRRR 724
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 214/452 (47%), Gaps = 15/452 (3%)
Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK-ADHVIREMS 180
++++RD G G L +M + +V E+ G+ K A +V +M
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P T+ + +C VNE+D AL L M +G PN V + L+H+L K +
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 241 DAVKFLGEVL---ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
+A++ L E+ D + +DVI D +A + N M + D +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN------EAAKMVNRMLIRGFAPDDI 323
Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG-V 356
Y L+NG C G + +A F ++ K P+++ +NTL++ G+LD+A +
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
++ G+ PD +Y ++I G G + A E L M K P + + +++DG+ + G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
+ A+++ + M + G+ N FN LI A + I +A + +EM G PDV+T+N
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
LI C + I AL L +M+ G+ + +TY LI RG +KEA ++ ++ G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
+D I + L K R E DKAR + +K L
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++I+ LC G++ A L KM++ G P ++ N L+N LC+ G +E+A +EM
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+P+ T+N+ I G CR ++ L +F + GI P+ VT N L+ LCK G + DA
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 243 VKFLGEVLAD 252
L E + D
Sbjct: 689 CLLLDEGIED 698
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++I LC G+I L + RK+ +G PD +T N L++ LCK G + A ++ E E
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 183 RPSPNCATYNAFITGYCRVNELDK 206
PN T++ + LD+
Sbjct: 699 GFVPNHRTWSILLQSIIPQETLDR 722
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 206/404 (50%), Gaps = 3/404 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I LC G++ A L+ +M +KG P T+ L+ LC G ++KA ++ EM
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN TY I G CR ++++A + M + I P+ +T+N L++ CK G + A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L + + +V T LM+ + G ++A+ L M + DIV+YNVLI
Sbjct: 392 ELLTVM---EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G C G +++A+ M PD +T+ ++N CKQGK D AS F G++ + G++
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
D+++ T+I G+C G A L ++++ ++ PH NVI+D + + ++
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
+ G+ +V T+ L+ R G I +F + + M L G P+V+ Y ++I C
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
G + A +L M G++P+ +TYT ++KG+ G + A E
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 194/398 (48%), Gaps = 5/398 (1%)
Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
R + +I+ LC G I A L +MI +G P+V T+ L++ LC+ G +E+A+ V R+
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
M + R P+ TYNA I GYC+ + A L + M +PN T N L+ LC+ G
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
AV L +L D + D+++ +L+D + G A L + M +I+ D +
Sbjct: 422 PYKAVHLLKRML---DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
+ +IN FC G A A+ ML++G D +T TL++ +CK GK +A L
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDL 417
K + S I+ L G VK +L + K +VP + ++DG R GD+
Sbjct: 539 KMRILTTPHSLNVILDMLS-KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
+ +F I +LM G NV+ + +I + G + +A L M G+ P+ TY ++
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
+ N G + AL+ M+ RG + Y+ L++G
Sbjct: 658 VKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 218/500 (43%), Gaps = 74/500 (14%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM---------------------- 179
R+M G V ++ + +VN LCK G E A+ + ++
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 180 --------------SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
E+ +PN +Y+ I G C V L++A L M G +P+ T
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
+ +L+ ALC +GL+ A E++ +V T T+L+D ++G +A +
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRG---CKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
M + I ++ YN LING+C +G + AF M KR P+V T+N L+ LC+ G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
K +A H + G++PD +SY +I GLC G + A + L SM + P+ +
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF--------- 456
II+ + + G A + LML G+S + T LI + G DA
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 457 --------------------SLKKEMLL------DGIFPDVFTYNLLIGASCNLGHIHLA 490
+K+E+ + G+ P V TY L+ G I +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
++ + M G P++ YT +I G C G ++EAE++ + +Q G++ +H+ + ++ K
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 551 YRRMKESDKARDIHQKWLLR 570
Y + D+A + + + R
Sbjct: 661 YVNNGKLDRALETVRAMVER 680
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 179/368 (48%), Gaps = 6/368 (1%)
Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
+RE+ R + C Y++ + +++ A + M +G + + +V+ALCK
Sbjct: 150 LREVFGFRLNYPC--YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207
Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQT 294
G A F+ ++L G I +++L+ + + + AL +++ M ++
Sbjct: 208 NGYTEAAEMFMSKIL--KIGFVLDSHIGTSLLL-GFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+ V+Y++LI+G C G + AF QM ++G P TY L+ LC +G +D+A + +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+ G P+ +Y +I GLC G I +A M++ + P +N +I+GY +
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
G + AF + +M NV TFN L+ R G + A L K ML +G+ PD+ +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
N+LI C GH++ A +L M I PD +T+T +I C +G A +
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 535 LGLAIDHI 542
G+++D +
Sbjct: 505 KGISLDEV 512
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/598 (23%), Positives = 247/598 (41%), Gaps = 105/598 (17%)
Query: 31 LNVARIFSNSRTCSDDDNLPCTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNAL 90
L V + S TC+ + L + VG + F KD E Q
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVG-----RLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 91 DLILKENLDR------LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
+++K DR + P C + + + +I LC GKI A + RKM
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGC--KPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
++ P V+T+N L+N CK G + A ++ M + PN T+N + G CRV +
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD----------- 253
KA+HL M +NG+ P+ V++N+L+ LC++G + A K L + D
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 254 ------DGKA---------------TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
GKA + D +T T L+D K G AL + + + I
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 293 QT-----------------------------------DIVAYNVLINGFCLNGDISSAFA 317
T +V Y L++G +GDI+ +F
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
M G LP+V Y ++N LC+ G+++EA + +GV+P+ ++Y +++G
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLMLSFGVSS 434
+G + +A E + +M+E+ I++ ++ G+ + D S ++ D+ L +
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR---ET 719
Query: 435 NVFTFNALI-LAETRGG-----SIFDAFSLKKE------------MLLDGIFPDVFTYNL 476
+ N LI + E GG IF L KE +L G+F + ++
Sbjct: 720 DPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDI 778
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
++ + C+ ++L +L+ G P ++ +I+G G+ + A E+ ++ T
Sbjct: 779 IMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLT 836
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 26/290 (8%)
Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
G K+ L + K+ + G VP V+T+ LV+ L + GD+ + ++ M PN
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
Y I G C+ +++A L S M ++G+ PN VT+ ++V G L A++ + ++
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 251 ADDDGKATSDVITSTILMDSYF-KNGDKFQALALWNDMFQKNIQTDIVAYNVLIN----- 304
+ G +D I S++L + G + +D+ + +TD N LI+
Sbjct: 679 --ERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR--ETDPECINELISVVEQL 734
Query: 305 GFCLNGDISSAFAYFCQ-------------MLKRG-FLPDVITYNTLLNCLCKQGKLDEA 350
G C++G C+ +L+RG FL + + ++ C + K +
Sbjct: 735 GGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM--DIIMESYCSKKKHTKC 792
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
++ K+G P S+ +IQGL GD +ARE ++ +L + V E
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVE 842
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 225/444 (50%), Gaps = 3/444 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I L G + A + +++ + G +V T N +VN LCK G +EK + ++ E
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ TYN I+ Y +++A L + M G P T+N +++ LCK G A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ E+L G + ++LM++ K GD + +++DM +++ D+V ++ +
Sbjct: 325 KEVFAEMLRS--GLSPDSTTYRSLLMEAC-KKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
++ F +G++ A YF + + G +PD + Y L+ C++G + A + + + G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
A D ++Y TI+ GLC + +A + M E+++ P+ + ++IDG+ + G+L NA
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ M + +V T+N L+ + G I A + +M+ I P +Y++L+ A C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
+ GH+ A +++DEM+ + I P ++ +IKG+C GN + E K+ + G D I
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 543 PFRILKKRYRRMKESDKARDIHQK 566
+ L + R + KA + +K
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKK 645
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 212/420 (50%), Gaps = 5/420 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
VI LC GK A + +M++ G PD T+ L+ E CK GD+ + + V +M
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ +++ ++ + R LDKAL F+++ G+ P+ V + IL+ C+KG++ A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ E+L DV+T ++ K +A L+N+M ++ + D +L
Sbjct: 430 MNLRNEMLQQG---CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+G C G++ +A F +M ++ DV+TYNTLL+ K G +D A + + +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P ISY ++ LC G + +A M+ K++ P I N +I GY R G+ S+ S
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD--GIFPDVFTYNLLIGA 480
+ M+S G + ++N LI R ++ AF L K+M + G+ PDVFTYN ++
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
C + A + +M+ RG+ PD TYT +I G ++ N+ EA + ++ G + D
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 227/484 (46%), Gaps = 40/484 (8%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
++ LC GK+ ++ +KG PD++T+N L++ G +E+A ++ M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
SP TYN I G C+ + ++A +F+ M +G+ P+ T+ L+ CKKG + +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
K ++ + D D++ + +M + ++G+ +AL +N + + + D V Y +LI
Sbjct: 361 KVFSDMRSRD---VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
G+C G IS A +ML++G DV+TYNT+L+ LCK+ L EA + +++ +
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD------- 416
PD + +I G C G++ A E M EK + + +N ++DG+G+ GD
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 417 ----------------------------LSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
L+ AF + D M+S + V N++I R
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR--GITPDI 506
G+ D S ++M+ +G PD +YN LI ++ A L +M G+ PD+
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
TY ++ G C + MKEAE V K+ G+ D + + + +A IH +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 567 WLLR 570
L R
Sbjct: 718 MLQR 721
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 205/398 (51%), Gaps = 5/398 (1%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
+R L D + +++ + C G + + M + VPD++ + +++ + G+L
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+KA + E P+ Y I GYCR + A++L + M G + VT+N +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+H LCK+ +LG+A K E+ + D T TIL+D + K G+ A+ L+ M +
Sbjct: 452 LHGLCKRKMLGEADKLFNEM---TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
K I+ D+V YN L++GF GDI +A + M+ + LP I+Y+ L+N LC +G L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A + + + P + ++I+G C G+ FL M+ + VP+ +N +I
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 410 GYGRCGDLSNAFSIRDLM--LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
G+ R ++S AF + M G+ +VFT+N+++ R + +A + ++M+ G+
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
PD TY +I + ++ A +++DEML+RG +PD
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 182/356 (51%), Gaps = 3/356 (0%)
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
NA I R+ ++ A ++ ++ +G+ N T NI+V+ALCK G + FL +V
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV-- 261
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+ D++T L+ +Y G +A L N M K + YN +ING C +G
Sbjct: 262 -QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
A F +ML+ G PD TY +LL CK+G + E + + V PD + + +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
++ G++ KA + S+ E ++P+ I+ ++I GY R G +S A ++R+ ML G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
+ +V T+N ++ + + +A L EM +FPD +T +LI C LG++ A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
+L+ +M + I D++TY L+ G G++ A+E++A + + + I + IL
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 21/325 (6%)
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
++H L + G L DA L ++ G + +++ S +DS F N ND
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRS-GVSRLEIVNS---LDSTFSNCGS-------ND-- 165
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+++LI + + A F + +GF + N L+ L + G ++
Sbjct: 166 --------SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE 217
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
A Y +S++GV + + ++ LC G + K FL + EK V P+ +N +I
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
Y G + AF + + M G S V+T+N +I + G A + EML G+
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
PD TY L+ +C G + +++ +M R + PD++ ++ ++ GN+ +A
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 529 FAKIQTLGLAIDHIPFRILKKRYRR 553
F ++ GL D++ + IL + Y R
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCR 422
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 200/391 (51%), Gaps = 3/391 (0%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
KM+ G + T N L+ LCK GD+++ + ++ ++ + PN TYN FI G C+
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
ELD A+ + + G +P+ +T+N L++ LCK +A +LG+++ + D
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG---LEPDSY 322
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T L+ Y K G A + D D Y LI+G C G+ + A A F +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
L +G P+VI YNTL+ L QG + EA+ +S+ G+ P+ ++ ++ GLC G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
A + M+ K P+ +N++I GY + NA I D+ML GV +V+T+N+L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
+ + D K M+ G P++FT+N+L+ + C + AL L +EM + +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
PD +T+ LI G C G++ A +F K++
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 208/420 (49%), Gaps = 4/420 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I LC K A KM+ +G PD T+N L+ CK G ++ A+ ++ +
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ TY + I G C E ++AL LF+ GI+PN + +N L+ L +G++ +A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ E+ + +V T IL++ K G A L M K DI +N+LI
Sbjct: 412 QLANEM---SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G+ + +A ML G PDV TYN+LLN LCK K ++ Y + + G A
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P+ ++ +++ LC + + +A L M KSV P+ + +IDG+ + GDL A+++
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 424 -RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
R + ++ VSS+ T+N +I A T ++ A L +EM+ + PD +TY L++ C
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
G+++L + EM+ G P + T +I C + EA + ++ GL + +
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 197/438 (44%), Gaps = 6/438 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A++ L G A + +M +G PDV + + CK A ++ MS
Sbjct: 116 AIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ 175
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
N Y + G+ N + LF M +G+ T N L+ LCKKG + +
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L +V+ ++ T + + + G+ A+ + + ++ + D++ YN L
Sbjct: 236 EKLLDKVIKRG---VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I G C N A Y +M+ G PD TYNTL+ CK G + A G G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
PDQ +Y+++I GLC G+ +A L K + P ++N +I G G + A
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ + M G+ V TFN L+ + G + DA L K M+ G FPD+FT+N+LI
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
+ AL++ D ML G+ PD+ TY L+ G C ++ E + + G A +
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 543 PFRILKK---RYRRMKES 557
F IL + RYR++ E+
Sbjct: 533 TFNILLESLCRYRKLDEA 550
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 218/465 (46%), Gaps = 10/465 (2%)
Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
MRD G + D ++ C + AL L M +G +V+ + +V
Sbjct: 137 MRDRG-----ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
+ + + +M S +T+N + C+ ++ + L + G+ PN
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
T+N+ + LC++G L AV+ +G ++ DVIT L+ KN KFQ +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQG---PKPDVITYNNLIYGLCKN-SKFQEAEV 307
Query: 284 W-NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
+ M + ++ D YN LI G+C G + A + GF+PD TY +L++ LC
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
+G+ + A + G+ P+ I Y T+I+GL G I++A + M EK ++PE
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
+N++++G + G +S+A + +M+S G ++FTFN LI + + +A + M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
L +G+ PDV+TYN L+ C ++ Y M+ +G P++ T+ L++ C +
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
EA + +++ + D + F L + + + D A + +K
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 185/397 (46%), Gaps = 3/397 (0%)
Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
G +++A +V M P +YNA ++ D+A ++ M + GI P+ +
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
I + + CK A++ L + + +V+ ++ +++ K + L+
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQG---CEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
M + + +N L+ C GD+ +++KRG LP++ TYN + LC++G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
LD A G L + G PD I+Y +I GLC + +A +L M+ + + P+ + +N
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
+I GY + G + A I + G + FT+ +LI G A +L E L G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
I P+V YN LI N G I A QL +EM +G+ P++ T+ L+ G C G + +A+
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
+ + + G D F IL Y + + A +I
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 2/236 (0%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K+ AL + M+ G PDV T+N L+N LCK E + M E +PN T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
+ CR +LD+AL L M N + P+ VT L+ CK G L A ++ +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM--E 593
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ K +S T I++ ++ + + A L+ +M + + D Y ++++GFC G++
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
+ + + +M++ GF+P + T ++NCLC + ++ EA+ + + G+ P+ ++
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 158/382 (41%), Gaps = 42/382 (10%)
Query: 206 KALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
KAL +F++M G + T+ ++ L G + + EVL D + ++
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYG----KFEAMEEVLVDMRENVGNHMLEG 77
Query: 265 TIL--MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
+ M +Y + G +A+ ++ M + + + +YN +++ +G A + +M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG------- 375
RG PDV ++ + CK + A +S G + ++Y T++ G
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 376 ----------------------------LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
LC GD+ + + L ++++ V+P +N+
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
I G + G+L A + ++ G +V T+N LI + +A +M+ +G+
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
PD +TYN LI C G + LA ++ + + G PD TY LI G C G A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 528 VFAKIQTLGLAIDHIPFRILKK 549
+F + G+ + I + L K
Sbjct: 378 LFNEALGKGIKPNVILYNTLIK 399
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
C++ + F + + G +Y+++I+ L +G E L+ M E
Sbjct: 16 CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE------- 68
Query: 402 HIWNVIIDG--------YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
++ N +++G YGR G + A ++ + M + VF++NA++ G
Sbjct: 69 NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFD 128
Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
A + M GI PDV+++ + + + C H AL+L + M +G +++ Y ++
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188
Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPF----RILKKRYRRMKESDKARD 562
G E E+F K+ G+++ F R+L K+ +KE +K D
Sbjct: 189 GGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK-GDVKECEKLLD 240
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 52/178 (29%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM- 182
++ LC K+ AL L +M K PD +T L++ CK GDL+ A + R+M E
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 183 -----RPS------------------------------PNCATYNAFITGYCRVNELDKA 207
P+ P+ TY + G+C+ ++
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALC----------------KKGLLGDAVKFLGEV 249
M NG P+ T +++ LC +KGL+ +AV + +V
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDV 714
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 219/465 (47%), Gaps = 37/465 (7%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
KM G PDV T N L+ LC+ L A ++ +M P+ T+ + GY
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+LD AL + M G + V+ N++VH CK+G + DA+ F+ E +++ DG D
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE-MSNQDG-FFPDQY 296
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T L++ K G A+ + + M Q+ D+ YN +I+G C G++ A QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
+ R P+ +TYNTL++ LCK+ +++EA+ VL+ G+ PD ++ ++IQGLC+ +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 383 VKAREFLLSMLEKSVVPEPHIWNV-----------------------------------I 407
A E M K P+ +N+ +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
IDG+ + A I D M GVS N T+N LI + + DA L +M+++G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
PD +TYN L+ C G I A + M G PDI+TY LI G C G ++ A +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
+ IQ G+ + + + + R +++ +A ++ ++ L +N+
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 5/436 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
L D + V++ G + AL +R +M++ G ++ N +V+ CK G +E A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 174 HVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
+ I+EMS P+ T+N + G C+ + A+ + M G P+ T+N ++
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
LCK G + +AV+ L +++ D + + +T L+ + K +A L + K I
Sbjct: 340 LCKLGEVKEAVEVLDQMITRD---CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
D+ +N LI G CL + A F +M +G PD TYN L++ LC +GKLDEA +
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
+ +G A I+Y T+I G C +A E M V +N +IDG
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
+ + +A + D M+ G + +T+N+L+ RGG I A + + M +G PD+
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
TY LI C G + +A +L + +GI Y +I+G + EA +F ++
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 533 QTLGLA-IDHIPFRIL 547
A D + +RI+
Sbjct: 637 LEQNEAPPDAVSYRIV 652
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 191/389 (49%), Gaps = 5/389 (1%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + +VI LC G++ A+ + +MI + P+ +T+N L++ LCK +E+A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ R ++ P+ T+N+ I G C A+ LF M + G P+ T+N+L+ +LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
KG L +A+ L ++ + G A S VIT L+D + K +A ++++M +
Sbjct: 447 SKGKLDEALNMLKQM--ELSGCARS-VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+ V YN LI+G C + + A QM+ G PD TYN+LL C+ G + +A+
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
++ G PD ++Y T+I GLC G + A + L S+ K + PH +N +I G R
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 415 GDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVF 472
+ A ++ R+++ + ++ + GG I +A E+L G P+
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683
Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRG 501
+ +L L ++L + ++++
Sbjct: 684 SLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 199/416 (47%), Gaps = 7/416 (1%)
Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
P+ + ++ L + G + ++ +M R +T+ I Y + D+ L +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 211 FSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD-DDGKATSDVITSTILM 268
M + G++P+ +N +++ L G+++K + A DV T +L+
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVD----GNSLKLVEISHAKMSVWGIKPDVSTFNVLI 196
Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
+ + A+ + DM + D + ++ G+ GD+ A QM++ G
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLS-KTGVAPDQISYKTIIQGLCIHGDIVKARE 387
++ N +++ CK+G++++A +F +S + G PDQ ++ T++ GLC G + A E
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
+ ML++ P+ + +N +I G + G++ A + D M++ S N T+N LI
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
+ + +A L + + GI PDV T+N LI C + +A++L++EM +G PD
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
TY LI C++G + EA + +++ G A I + L + + ++ +A +I
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 15/196 (7%)
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
D R F L+ + + PEP ++ I+ GR G + I + M S TF
Sbjct: 63 DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF- 121
Query: 441 ALILAETRGGSIFDAFSLKKEML------LD--GIFPDVFTYNLLIGASCNLGHIHLALQ 492
LIL E+ + F L+ E+L +D G+ PD YN ++ + + L
Sbjct: 122 -LILIES-----YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
+ +M GI PD+ T+ LIK C ++ A + + + GL D F + + Y
Sbjct: 176 SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235
Query: 553 RMKESDKARDIHQKWL 568
+ D A I ++ +
Sbjct: 236 EEGDLDGALRIREQMV 251
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 201/425 (47%), Gaps = 5/425 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
LE + +++ C GKI AL L +M KG P + T L++ L + G + A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM+E PN TYN I GYC ++ KA M GI P+ ++ L+H L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C G +A F+ + G + I T L+ + + G +AL++ +M Q+ +
Sbjct: 588 CLTGQASEAKVFVDGL---HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D+V Y VLI+G + D F +M RG PD + Y ++++ K G EA
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ ++ G P++++Y +I GLC G + +A M S VP + +D +
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 414 CG-DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
D+ A + + +L G+ +N T+N LI R G I +A L M+ DG+ PD
Sbjct: 765 GEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
TY +I C + A++L++ M +GI PD + Y LI G C G M +A E+ ++
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 533 QTLGL 537
GL
Sbjct: 884 LRQGL 888
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 216/476 (45%), Gaps = 38/476 (7%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
C GK+ TAL +M+ G V +N L+N CK GD+ A+ + EM + P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
TY + + GYC +++KAL L+ M GI P+ T L+ L + GL+ DAVK
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
E+ + + +T ++++ Y + GD +A +M +K I D +Y LI+G C
Sbjct: 532 EMA---EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
L G S A + + K + I Y LL+ C++GKL+EA + + GV D +
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
Y +I G H D L M ++ + P+ I+ +ID + GD AF I DLM
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM------------------------- 462
++ G N T+ A+I + G + +A L +M
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 463 ----------LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
+L G+ + TYN+LI C G I A +L M+ G++PD ITYT +
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
I C R ++K+A E++ + G+ D + + L E KA ++ + L
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 208/438 (47%), Gaps = 38/438 (8%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI---------------- 166
+I LC K+ A+ +++ + K PDV+T+ LV LCK+
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326
Query: 167 -------------------GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G +E+A ++++ + + SPN YNA I C+ + +A
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
LF M G+RPN VT++IL+ C++G L A+ FLGE++ D G S V L
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV--DTGLKLS-VYPYNSL 443
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
++ + K GD A +M K ++ +V Y L+ G+C G I+ A + +M +G
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
P + T+ TLL+ L + G + +A + +++ V P++++Y +I+G C GD+ KA E
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
FL M EK +VP+ + + +I G G S A D + N + L+
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
R G + +A S+ +EM+ G+ D+ Y +LI S L L EM RG+ PD +
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 508 TYTELIKGHCARGNMKEA 525
YT +I G+ KEA
Sbjct: 684 IYTSMIDAKSKTGDFKEA 701
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 213/460 (46%), Gaps = 3/460 (0%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
+ +L + R A++ L G A+ L M+ G PDV + ++ LC++ DL
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 244
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+A +I M N YN I G C+ ++ +A+ + +A ++P+ VT+ LV
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
+ LCK ++ + E+L + + V + L++ K G +AL L +
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDF 361
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
+ ++ YN LI+ C A F +M K G P+ +TY+ L++ C++GKLD A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
F G + TG+ Y ++I G C GDI A F+ M+ K + P + ++ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
Y G ++ A + M G++ +++TF L+ R G I DA L EM + P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
TYN++I C G + A + EM +GI PD +Y LI G C G EA+
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
+ ++ I + L + R + ++A + Q+ + R
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 200/438 (45%), Gaps = 3/438 (0%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
V + D + VIR LC + A + M G +++ +N L++ LCK +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+A + ++++ P+ TY + G C+V E + L + M P+ + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
V L K+G + +A+ + V+ D + ++ L+DS K +A L++ M +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVV---DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++ + V Y++LI+ FC G + +A ++ +M+ G V YN+L+N CK G +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A F + + P ++Y +++ G C G I KA M K + P + + ++
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
G R G + +A + + M + V N T+N +I G + AF KEM GI P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
D ++Y LI C G A D + + + I YT L+ G C G ++EA V
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 530 AKIQTLGLAIDHIPFRIL 547
++ G+ +D + + +L
Sbjct: 636 QEMVQRGVDLDLVCYGVL 653
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 140/281 (49%), Gaps = 7/281 (2%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++ C GK+ AL + ++M+Q+G D++ + L++ K D + +++EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ Y + I + + +A ++ M N G PN VT+ +++ LCK G +
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 241 DAVKFLGEVLADDDGKATS--DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
+A EVL +S + +T +D K Q ++ K + +
Sbjct: 735 EA-----EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
YN+LI GFC G I A +M+ G PD ITY T++N LC++ + +A + ++
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
+ G+ PD+++Y T+I G C+ G++ KA E ML + ++P
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
LK M D G L+ D + ++I G A + MI +G VP+ +T+ ++
Sbjct: 670 LKEMHDRG-----LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGI 219
N LCK G + +A+ + +M + PN TY F+ + ++ KA+ L + + G+
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GL 783
Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
N T+N+L+ C++G + +A + + ++ D + D IT T +++ + D +
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDG---VSPDCITYTTMINELCRRNDVKK 840
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
A+ LWN M +K I+ D VAYN LI+G C+ G++ A +ML++G +P+ T T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 44/289 (15%)
Query: 299 YNVLINGFCLNGDISSAFAYFCQML-KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
+++LI + + + F M+ K LP+V T + LL+ L K A + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM----LEKSVVPEPHIWNVIIDG--- 410
G+ PD Y +I+ LC D+ +A+E + M + ++VP +NV+IDG
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP----YNVLIDGLCK 274
Query: 411 ------------------------------YGRCG--DLSNAFSIRDLMLSFGVSSNVFT 438
YG C + + D ML S +
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
++L+ + G I +A +L K ++ G+ P++F YN LI + C H A L+D M
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
+ G+ P+ +TY+ LI C RG + A ++ GL + P+ L
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%)
Query: 90 LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
LD++ K +D K + + L + + +IR C G+I A L +MI G
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
PD +T+ ++NELC+ D++KA + M+E P+ YN I G C E+ KA
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 210 LFSTMANNGIRPNRVT 225
L + M G+ PN T
Sbjct: 879 LRNEMLRQGLIPNNKT 894
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 223/449 (49%), Gaps = 3/449 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+++ +C GK+ L KG +P+++ +N ++ CK+GD+E A V +E+
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P T+ I G+C+ + + L S + G+R + N ++ A + G D
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ +G ++A+D DV T IL++ K G K A+ ++ +K + + ++Y LI
Sbjct: 331 ESIGWIIAND---CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+C + + A QM +RG PD++TY L++ L G +D+A + L GV+
Sbjct: 388 QAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVS 447
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD Y ++ GLC G + A+ ML+++++P+ +++ +IDG+ R GD A +
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
L + GV +V NA+I R G + +A + M + + PD FTY+ +I
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
+ A++++ M + P+++TYT LI G C +G+ K AEE F ++Q L + +
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRNK 572
+ L + + + + + + ++ NK
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNK 656
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 201/443 (45%), Gaps = 23/443 (5%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + +I LC GK A+ + +KG +P+ L++ L+ CK + + A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
++ +M+E P+ TY I G +D A+++ + + G+ P+ +N+L+ LC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K G A E+L D D L+D + ++GD +A +++ +K ++
Sbjct: 462 KTGRFLPAKLLFSEML---DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
D+V +N +I GFC +G + A A +M + +PD TY+T+++ KQ + A +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR- 413
+ K P+ ++Y ++I G C GD A E M + +VP + +I +
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNAL-----------ILAETRG-----GSIFDAFS 457
L A +LM++ N TFN L +LAE G S+F F
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFF 698
Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
+ M DG YN + C G + A D+M+++G +PD +++ ++ G C
Sbjct: 699 HR--MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Query: 518 ARGNMKEAEEV-FAKIQTLGLAI 539
GN K+ + F + GL +
Sbjct: 757 VVGNSKQWRNMDFCNLGEKGLEV 779
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 164/401 (40%), Gaps = 41/401 (10%)
Query: 197 GYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
Y L KA+ ++ + P+ + N L+ L K LGDA K E+ D
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGD- 201
Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
+ D ++ IL+ G L + K +IV YN +I G+C GDI +A
Sbjct: 202 --SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQG------------------------------ 345
+ F ++ +GF+P + T+ T++N CK+G
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 346 ------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
K+D A G + PD +Y +I LC G A FL +K ++P
Sbjct: 320 KYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
+ +I Y + + A + M G ++ T+ LI G + DA ++K
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
+++ G+ PD YN+L+ C G A L+ EML R I PD Y LI G
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
G+ EA +VF+ G+ +D + + K + R D+A
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 140/304 (46%), Gaps = 20/304 (6%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
++ D H A+I+ C G + AL +M ++ VPD T++ +++ K D+ A
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ R M + + PN TY + I G+C + A F M + PN VT+ L+ +L
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK----------NGDKFQALAL 283
K+ + + E++ + K + +T L+ + K +G +L
Sbjct: 636 AKESSTLEKAVYYWELMMTN--KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693
Query: 284 WNDMFQKNIQTD-----IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
+++ F + +++D AYN + C++G + +A + +M+K+GF PD +++ +L
Sbjct: 694 FSEFFHR-MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 339 NCLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
+ C G + + + L + G+ + Y +++ I +A L +M+EK+
Sbjct: 753 HGFCVVGNSKQWRNMDFCNLGEKGLEV-AVRYSQVLEQHLPQPVICEASTILHAMVEKAD 811
Query: 398 VPEP 401
EP
Sbjct: 812 TKEP 815
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 212/462 (45%), Gaps = 39/462 (8%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
H V+ L G++ AL R ++++G +++ N ++ L + +E A ++ +
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+PN T+ I G+C+ E+D+A LF M GI P+ + ++ L+ K G+LG
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
K + L DV+ + +D Y K+GD A ++ M + I ++V Y
Sbjct: 339 MGHKLFSQALHKG---VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+LI G C +G I AF + Q+LKRG P ++TY++L++ CK G L Y + K
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G PD + Y ++ GL G ++ A F + ML +S+ ++N +IDG+ R A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
+ LM +G+ +V TF ++ G + +A L M G+ PD Y LI A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 481 SCNLGHIHLALQLYDEMLRRGIT-----------------------------------PD 505
C + LQL+D M R I+ PD
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
I+TY +I G+C+ + EAE +F ++ + + IL
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 216/511 (42%), Gaps = 48/511 (9%)
Query: 98 LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
D K M G +E D + +I G +G L + + KG DV+ +
Sbjct: 306 FDLFKVMEQRG-----IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
++ K GDL A V + M SPN TY I G C+ + +A ++ +
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA--TSDVITSTILMDSYFKNG 275
G+ P+ VT++ L+ CK G L G L +D K DV+ +L+D K G
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRS-----GFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
A+ M ++I+ ++V +N LI+G+C A F M G PDV T+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH---------------- 379
T++ +G+L+EA + + K G+ PD ++Y T+I C H
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 380 ---GDIV----------------KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
DI A +F +++E + P+ +N +I GY L A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
I +L+ N T LI + + A + M G P+ TY L+
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
I + +L++EM +GI+P I++Y+ +I G C RG + EA +F + L D
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
+ + IL + Y ++ +A +++ +LRN
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEH-MLRN 805
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 184/392 (46%), Gaps = 3/392 (0%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E + ++I C G + + L MI+ G PDV+ + LV+ L K G + A
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+M N +N+ I G+CR+N D+AL +F M GI+P+ T ++
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
+G L +A+ + D + L+D++ K+ L L++ M + I
Sbjct: 542 IMEGRLEEALFLFFRMFK---MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
DI NV+I+ I A +F +++ PD++TYNT++ C +LDEA
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ +L T P+ ++ +I LC + D+ A M EK P + ++D + +
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
D+ +F + + M G+S ++ +++ +I + G + +A ++ + + + PDV
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
Y +LI C +G + A LY+ MLR G+ PD
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 202/450 (44%), Gaps = 32/450 (7%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
G + TA + ++M+ +G P+V+T+ L+ LC+ G + +A + ++ + P+ TY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
++ I G+C+ L L+ M G P+ V + +LV L K+GL+ A++F ++L
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 252 DD------------DG--------------------KATSDVITSTILMDSYFKNGDKFQ 279
DG DV T T +M G +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
AL L+ MF+ ++ D +AY LI+ FC + + F M + D+ N +++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
L K ++++AS F+ L + + PD ++Y T+I G C + +A + P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
++I + D+ A + +M G N T+ L+ ++ I +F L
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
+EM GI P + +Y+++I C G + A ++ + + + PD++ Y LI+G+C
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
G + EA ++ + G+ D + R L +
Sbjct: 790 GRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 193/414 (46%), Gaps = 3/414 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I C G++ A L + M Q+G PD++ ++ L++ K G L + +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ +++ I Y + +L A ++ M GI PN VT+ IL+ LC+ G + +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
G++L ++T + L+D + K G+ AL+ DM + D+V Y VL
Sbjct: 411 FGMYGQILKRG---MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
++G G + A + +ML + +V+ +N+L++ C+ + DEA + ++ G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
PD ++ T+++ + G + +A M + + P+ + +ID + + +
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ DLM +S+++ N +I + I DA ++ + PD+ TYN +I C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
+L + A ++++ + P+ +T T LI C +M A +F+ + G
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 177/371 (47%), Gaps = 11/371 (2%)
Query: 199 CRVNELDKALHLFSTMANNGIR-PNRVTHNILVHALCKKGLLG-DAVKFLGEVLAD--DD 254
CR +DKAL +F G+ P + +L L+G D V + +
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRML------NSLIGSDRVDLIADHFDKLCRG 210
Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
G S V ++D+ F G+ +AL + ++ + IV+ N ++ G ++ I
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
A +L G P+V+T+ TL+N CK+G++D A + V+ + G+ PD I+Y T+I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
G G + + L K V + +++ ID Y + GDL+ A + ML G+S
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
NV T+ LI + G I++AF + ++L G+ P + TY+ LI C G++ LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
++M++ G PD++ Y L+ G +G M A K+ + ++ + F L + R+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 555 KESDKARDIHQ 565
D+A + +
Sbjct: 510 NRFDEALKVFR 520
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%)
Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
I + L +M +KG P +++++ +++ LCK G +++A ++ + + + P+ Y
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 781
Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
I GYC+V L +A L+ M NG++P+ + L K L+ V
Sbjct: 782 LIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGV 831
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 213/425 (50%), Gaps = 7/425 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I LCL G++ A L KM+ KG DV+T+ +VN +CK+GD + A +++ +M E
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ Y+A I C+ A +LFS M GI PN T+N ++ C G DA
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +++ + + DV+T L+ + K G F+A L ++M + I D V YN +
Sbjct: 351 QRLLRDMI---EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I GFC + A F M PDV+T+NT+++ C+ ++DE +S+ G+
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
+ +Y T+I G C ++ A++ M+ V P+ N+++ G+ L A
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ +++ + + +N +I +G + +A+ L + + G+ PDV TYN++I C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
I A L+ +M G PD TY LI+G G + ++ E+ +++++ G + D
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 543 PFRIL 547
+++
Sbjct: 644 TIKMV 648
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 192/412 (46%), Gaps = 27/412 (6%)
Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
N ++ ++ + A + R+M R N ++N I +C ++L +L F +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
G +P+ VT N L+H LC + + +A+ G Y
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFG-----------------------YMVETG 206
Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
+A+AL++ M + + ++ +N LING CL G + A A +M+ +G DV+TY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
++N +CK G A + + +T + PD + Y II LC G A+ MLEK
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
+ P +N +IDG+ G S+A + M+ ++ +V TFNALI A + G +F+A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
L EML IFPD TYN +I C A ++D M +PD++T+ +I +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
C + E ++ +I GL + + L + + + A+D+ Q+ +
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 213/443 (48%), Gaps = 24/443 (5%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
A+ L RKM + ++ + N L+ C L + +++++ P+ T+N +
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 197 GYCRVNELDKALHLFSTMANN---------------GIRPNRVTHNILVHALCKKGLLGD 241
G C + + +AL LF M G+ P +T N L++ LC +G + +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 242 AVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
A + +++ GK DV+T +++ K GD AL L + M + +I+ D+V Y+
Sbjct: 245 AAALVNKMV----GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+I+ C +G S A F +ML++G P+V TYN +++ C G+ +A + +
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
+ PD +++ +I G + +A + ML + + P+ +N +I G+ + +A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
+ DLM S +V TFN +I R + + L +E+ G+ + TYN LI
Sbjct: 421 KHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
C + +++ A L+ EM+ G+ PD IT L+ G C ++EA E+F IQ + +D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 541 HIPFRILKKRYRRMKESDKARDI 563
+ + I+ + + D+A D+
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDL 559
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 185/383 (48%), Gaps = 12/383 (3%)
Query: 95 KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
K L+ L M +T ++ D + A+I LC G A +L +M++KG P+V
Sbjct: 278 KSALNLLSKMEET-----HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
T+N +++ C G A ++R+M E +P+ T+NA I+ + +L +A L M
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
+ I P+ VT+N +++ CK DA D A+ DV+T ++D Y +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-------DLMASPDVVTFNTIIDVYCRA 445
Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
+ + L ++ ++ + + YN LI+GFC ++++A F +M+ G PD IT
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
N LL C+ KL+EA + V+ + + D ++Y II G+C + +A + S+
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
V P+ +NV+I G+ +S+A + M G + T+N LI + G I
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 455 AFSLKKEMLLDGIFPDVFTYNLL 477
+ L EM +G D FT ++
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMV 648
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%)
Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
S+ DA M+ F N +IG + +A+ LY +M R I +I ++
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
LIK C + + F K+ LG D + F L
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 191/386 (49%), Gaps = 3/386 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
V+ +CL + A KM++ G PD++T L+N C +E A + ++ M
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN TY I C+ L+ A+ LF+ M NG RPN VT+N LV LC+ G GDA
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L +++ + +VIT T L+D++ K G +A L+N M Q ++ D+ Y LI
Sbjct: 244 WLLRDMMKR---RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NG C+ G + A F M + G P+ + Y TL++ CK ++++ + +S+ GV
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
+ I+Y +IQG C+ G A+E M + P+ +NV++DG G + A I
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
+ M + N+ T+ +I + G + DAF L + G+ P+V TY +I C
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 484 LGHIHLALQLYDEMLRRGITPDIITY 509
G IH A L+ +M G P+ Y
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 211/476 (44%), Gaps = 43/476 (9%)
Query: 91 DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
+L + LD M + P+ + D+ R ++VI + + + L +M G
Sbjct: 61 NLQFNDALDLFTRMVHSRPLPSII--DFTRLLSVIAKM---NRYDVVISLFEQMQILGIP 115
Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
P + T N +++ +C +A + +M ++ P+ T+ + + GYC N ++ A+ L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
F + G +PN VT+ L+ LC
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLC------------------------------------ 199
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
KN A+ L+N M + ++V YN L+ G C G A M+KR P+
Sbjct: 200 --KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
VIT+ L++ K GKL EA Y V+ + V PD +Y ++I GLC++G + +AR+
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
M P I+ +I G+ + + + I M GV +N T+ LI G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
A + +M PD+ TYN+L+ C G + AL +++ M +R + +I+TYT
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
+I+G C G +++A ++F + + G+ + I + + + R +A + +K
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 32/280 (11%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A++ LC G+ G A WL R M+++ P+V+T L++ K+G L +A + M +M
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ TY + I G C LD+A +F M NG PN V + L+H CK + D
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 243 VKFLGE-----VLAD---------------------------DDGKATSDVITSTILMDS 270
+K E V+A+ +A D+ T +L+D
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
NG +AL ++ M ++ + +IV Y ++I G C G + AF FC + +G P+
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
VITY T+++ C++G + EA + + + G P++ YK
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 209/422 (49%), Gaps = 6/422 (1%)
Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
D+ R ++ I + K ++L +M G ++ T N L+N C+ L A
Sbjct: 82 ADFSRLLSAISKM---KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
+ +M ++ P+ T+ + + G+CR + + AL++F M G +PN V +N ++ LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
+ +A+ L + D G DV+T L+ +G A + + M ++ I D
Sbjct: 199 SKQVDNALDLLNRMEKDGIG---PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
+ +N LI+ G +S A ++ +M++R PD++TY+ L+ LC +LDEA +G
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
+ G PD ++Y +I G C + + M ++ VV + ++I GY R G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
L+ A I M+ GV N+ T+N L+ G I A + +M +G+ D+ TYN
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
++I C G + A +Y + +G+ PDI TYT ++ G +G +EA+ +F K++
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Query: 536 GL 537
G+
Sbjct: 496 GI 497
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 185/378 (48%), Gaps = 3/378 (0%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
C ++ AL KMI+ G P ++T L+N C+ + A ++ +M M PN
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
YN I G C+ ++D AL L + M +GI P+ VT+N L+ LC G DA + +
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
+ + DV T L+D+ K G +A + +M ++++ DIV Y++LI G C
Sbjct: 246 CMTKRE---IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
+ + A F M+ +G PDV+TY+ L+N CK K++ + +S+ GV + +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
+Y +IQG C G + A E M+ V P +NV++ G G + A I M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
G+ +++ T+N +I + G + DA+ + + G+ PD++TY ++ G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 488 HLALQLYDEMLRRGITPD 505
A L+ +M GI P+
Sbjct: 483 READALFRKMKEDGILPN 500
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 194/397 (48%), Gaps = 38/397 (9%)
Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
M + RP P+ A ++ ++ ++ + D ++L+ M GI N T NIL++ C+
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
L A+ FLG+++ G S ++T L++ + + + AL +++ M + ++V
Sbjct: 132 LSLALSFLGKMIKL--GHEPS-IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC---------------- 342
YN +I+G C + + +A +M K G PDV+TYN+L++ LC
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 343 -------------------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
K+G++ EA FY + + + PD ++Y +I GLC++ +
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
+A E M+ K P+ ++++I+GY + + + + M GV N T+ LI
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
R G + A + + M+ G+ P++ TYN+L+ C+ G I AL + +M + G+
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
DI+TY +I+G C G + +A +++ + GL D
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 150/290 (51%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
+ LW M I ++ N+L+N FC +S A ++ +M+K G P ++T+ +LLN
Sbjct: 100 VIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN 159
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
C+ ++ +A + + + G P+ + Y TII GLC + A + L M + + P
Sbjct: 160 GFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGP 219
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
+ +N +I G G S+A + M + +VFTFNALI A + G + +A
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
+EM+ + PD+ TY+LLI C + A +++ M+ +G PD++TY+ LI G+C
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
++ ++F ++ G+ + + + IL + Y R + + A +I ++ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 123/235 (52%), Gaps = 3/235 (1%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
G++ A +MI++ PD++T++ L+ LC L++A+ + M P+ TY
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
+ I GYC+ +++ + LF M+ G+ N VT+ IL+ C+ G L A + ++
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
++IT +L+ NG +AL + DM + + DIV YN++I G C G+
Sbjct: 390 ---CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
++ A+ +C + +G +PD+ TY T++ L K+G EA + + + G+ P++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Query: 401 PH---IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
PH N++++ + RC LS A S M+ G ++ TF +L+ RG ++DA
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
+ +M+ G P+V YN +I C + AL L + M + GI PD++TY LI G C
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
+ G +A + + + + D F L + +A + +++ + R+
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 234/504 (46%), Gaps = 47/504 (9%)
Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
L+ MR R +L D + VIR C G ++ AL L +M G ++T L+
Sbjct: 165 LREMR-----RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
+ CK G +++A ++EM M + Y + I G+C ELD+ LF + G
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
P +T+N L+ CK G L +A + ++ + +V T T L+D G +A
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMI---ERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
L L N M +K+ + + V YN++IN C +G ++ A M KR PD ITYN LL
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 341 LCKQGKLDEASHFYGVLSKTG--VAPDQISYKTIIQGLC----IH--------------- 379
LC +G LDEAS ++ K PD ISY +I GLC +H
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 380 ----------------GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
GD+ KA E + + +V + +IDG+ + G L+ A +
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M + +VF +N L+ + + GS+ A+ L +EM D FPDV ++N++I S
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID-HI 542
G I A L M R G++PD+ TY++LI G + EA F K+ G D HI
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Query: 543 PFRILKKRYRRMKESDKARDIHQK 566
+LK + E+DK ++ +K
Sbjct: 637 CDSVLKYCISQ-GETDKLTELVKK 659
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 226/497 (45%), Gaps = 69/497 (13%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K G A + M+++G +V HN L+ LC+ + KA ++REM P+ +YN
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL-- 250
I G+C EL+KAL L + M +G + VT IL+ A CK G + +A+ FL E+
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Query: 251 ---AD-----------------DDGKATSD----------VITSTILMDSYFKNGDKFQA 280
AD D GKA D IT L+ + K G +A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
++ M ++ ++ ++ Y LI+G C G A M+++ P+ +TYN ++N
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
LCK G + +A ++ K PD I+Y ++ GLC GD+ +A + L ML+ S +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 401 PHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
P + +N +I G + L A I DL++ + + T N L+ + + G + A L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 459 KKEM--------------LLDG---------------------IFPDVFTYNLLIGASCN 483
K++ ++DG + P VF YN L+ + C
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + A +L++EM R PD++++ +I G G++K AE + + GL+ D
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 544 FRILKKRYRRMKESDKA 560
+ L R+ ++ D+A
Sbjct: 602 YSKLINRFLKLGYLDEA 618
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 216/450 (48%), Gaps = 10/450 (2%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
+ E + LK M+ G LE D + ++IR C G++ L +++++G P
Sbjct: 228 MDEAMGFLKEMKFMG-----LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
+T+N L+ CK+G L++A + M E PN TY I G C V + +AL L +
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
M PN VT+NI+++ LCK GL+ DAV+ + E++ + D IT IL+
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKR--RTRPDNITYNILLGGLCA 399
Query: 274 NGDKFQALALWNDMFQKNIQTD--IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
GD +A L M + + TD +++YN LI+G C + A + ++++ D
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
+T N LLN K G +++A + +S + + + +Y +I G C G + A+ L
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
M + P +N ++ + G L A+ + + M +V +FN +I + G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
I A SL M G+ PD+FTY+ LI LG++ A+ +D+M+ G PD
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
++K ++G + E+ K+ + +D
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDK 669
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 196/400 (49%), Gaps = 7/400 (1%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
A RKM++ T + ++ + L+ ++ A V+ M + + N +N +
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
G CR E KA+ L M N + P+ ++N ++ C+ L A++ E+ G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM----KGS 206
Query: 257 ATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
S ++T IL+D++ K G +A+ +M ++ D+V Y LI GFC G++
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
A F ++L+RG P ITYNTL+ CK G+L EAS + + + GV P+ +Y +I G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
LC G +A + L M+EK P +N+II+ + G +++A I +LM +
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIF--PDVFTYNLLIGASCNLGHIHLALQL 493
T+N L+ G + +A L ML D + PDV +YN LI C +H AL +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
YD ++ + D +T L+ G++ +A E++ +I
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 178/407 (43%), Gaps = 55/407 (13%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVN--------ELDKALHLFSTMANNGIR 220
L + +HV+R++ + P NAF ++ +L A+ +F ++G
Sbjct: 13 LRRDEHVVRKL--LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSS 70
Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF---KNGDK 277
+N++ L + A F ++L D + ++ + L++ Y K G
Sbjct: 71 LAFAGNNLMAK-LVRSRNHELAFSFYRKMLETD---TFINFVSLSGLLECYVQMRKTGFA 126
Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT- 336
F LAL M ++ ++ +N+L+ G C N + A + +M + +PDV +YNT
Sbjct: 127 FGVLAL---MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183
Query: 337 ----------------------------------LLNCLCKQGKLDEASHFYGVLSKTGV 362
L++ CK GK+DEA F + G+
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
D + Y ++I+G C G++ + + +LE+ P +N +I G+ + G L A
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
I + M+ GV NV+T+ LI G +A L M+ P+ TYN++I C
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
G + A+++ + M +R PD ITY L+ G CA+G++ EA ++
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--SE 181
+I LC G + A+ + M ++ T PD +T+N L+ LC GDL++A ++ M
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
P+ +YNA I G C+ N L +AL ++ + +RVT NIL+++ K G +
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 242 AVKFLGEVLADDDGKATSDVITSTI---------------------------------LM 268
A++ ++ +D SD T+ I L+
Sbjct: 478 AMELWKQI-SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
S K G QA L+ +M + N D+V++N++I+G GDI SA + M + G
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
PD+ TY+ L+N K G LDEA F+ + +G PD ++++ G+ K E
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTEL 656
Query: 389 LLSMLEKSVVPEPHIWNVIID 409
+ +++K +V + + ++D
Sbjct: 657 VKKLVDKDIVLDKELTCTVMD 677
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 3/263 (1%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + A+I LC ++ AL + +++K D +T N L+N K GD+ KA
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ +++S+ + N TY A I G+C+ L+ A L M + ++P+ +N L+ +LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K+G L A + E+ D++ DV++ I++D K GD A +L M + +
Sbjct: 541 KEGSLDQAWRLFEEMQRDNN---FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
D+ Y+ LIN F G + A ++F +M+ GF PD +++L QG+ D+ +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 355 GVLSKTGVAPDQISYKTIIQGLC 377
L + D+ T++ +C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%)
Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
AF + LML G + NV+ N L+ R A SL +EM + + PDVF+YN +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
C + AL+L +EM G + ++T+ LI C G M EA +++ +GL
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
D + + L + + E D+ + + + L R
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 35/251 (13%)
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
AF+++ +ML+ + ++ + LL C + K A ++ K G A + ++ +++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
GLC + + KA L M S++P+
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPD---------------------------------- 176
Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
VF++N +I G + A L EM G + T+ +LI A C G + A+
Sbjct: 177 -VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
EM G+ D++ YT LI+G C G + + +F ++ G + I + L + + ++
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 555 KESDKARDIHQ 565
+ +A +I +
Sbjct: 296 GQLKEASEIFE 306
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 401 PHIWNVIIDGYGR--------CGD----LSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
P +++ +++ + C D L NA S+ + G SS F N L+ R
Sbjct: 26 PRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLVR 84
Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
+ AFS ++ML F + + + L+ + A + ML+RG ++
Sbjct: 85 SRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYN 144
Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
+ L+KG C +A + +++ L D + + + + KE +KA ++ +
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%)
Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
G I +A L M + G PD+ T++ L+N K+G L++A +M + P+
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
++ + E DK L + + I ++ ++ +C D K L V
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVT 696
Query: 251 ADDDGK 256
D + +
Sbjct: 697 DDKEER 702
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 202/406 (49%), Gaps = 4/406 (0%)
Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
C G +L L M++KG PDV+ L+ + ++ KA V+ E+ E P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
YNA I G+C++N +D A + M + P+ VT+NI++ +LC +G L A+K L +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
+L+D+ VIT TIL+++ G +AL L ++M + ++ D+ YN +I G C
Sbjct: 219 LLSDN---CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
G + AF + +G PDVI+YN LL L QGK +E + P+ ++
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
Y +I LC G I +A L M EK + P+ + ++ +I + R G L A + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
S G ++ +N ++ + G A + ++ G P+ +YN + A + G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
AL + EM+ GI PD ITY +I C G + EA E+ +++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 201/437 (45%), Gaps = 4/437 (0%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + A+I C +I A + +M K PD +T+N ++ LC G L+ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
V+ ++ P TY I +D+AL L M + G++P+ T+N ++ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K+G++ A + + + + DVI+ IL+ + G + L MF +
Sbjct: 275 KEGMVDRAFEMVRNL---ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
++V Y++LI C +G I A M ++G PD +Y+ L+ C++G+LD A F
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+ G PD ++Y T++ LC +G +A E + E P +N +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
GD A + M+S G+ + T+N++I R G + +AF L +M P V TY
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
N+++ C I A+ + + M+ G P+ TYT LI+G G EA E+ +
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Query: 535 LGLAIDHIPFRILKKRY 551
+ AI F+ L + +
Sbjct: 572 ID-AISEYSFKRLHRTF 587
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 177/381 (46%), Gaps = 4/381 (1%)
Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
C+ G+ ++ H++ M +P+ I G+ + + KA+ + + G +P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
+N L++ CK + DA + L + + D + D +T I++ S G AL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
N + N Q ++ Y +LI L G + A +ML RG PD+ TYNT++ +CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
+G +D A L G PD ISY +++ L G + + + M + P
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
++++I R G + A ++ LM G++ + ++++ LI A R G + A + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
DG PD+ YN ++ C G AL+++ ++ G +P+ +Y + + G+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 524 EAEEVFAKIQTLGLAIDHIPF 544
A + ++ + G+ D I +
Sbjct: 456 RALHMILEMMSNGIDPDEITY 476
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 155/310 (50%), Gaps = 3/310 (0%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
L+ D + +IR +C G + A + R + KG PDV+++N L+ L G E+ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M + PN TY+ IT CR ++++A++L M G+ P+ +++ L+ A
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C++G L A++FL +++D D++ ++ + KNG QAL ++ + +
Sbjct: 379 CREGRLDVAIEFLETMISDG---CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+ +YN + + +GD A +M+ G PD ITYN++++CLC++G +DEA
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ P ++Y ++ G C I A L SM+ P + V+I+G G
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
Query: 414 CGDLSNAFSI 423
G + A +
Sbjct: 556 AGYRAEAMEL 565
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 6/366 (1%)
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
CR ++LHL TM G P+ + L+ + AV+ + E+L +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EIL---EKFGQ 155
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
DV L++ + K A + + M K+ D V YN++I C G + A
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
Q+L P VITY L+ +G +DEA + G+ PD +Y TII+G+C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
G + +A E + ++ K P+ +N+++ G + M S NV T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
++ LI R G I +A +L K M G+ PD ++Y+ LI A C G + +A++ + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
G PDI+ Y ++ C G +A E+F K+ +G + + + + D
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL--WSSGD 453
Query: 559 KARDIH 564
K R +H
Sbjct: 454 KIRALH 459
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 202/395 (51%), Gaps = 10/395 (2%)
Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
C + D + VI LC + AL + KM++ G PDV+T + L+N C+ +
Sbjct: 98 CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157
Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
A ++ +M EM P+ YN I G C++ ++ A+ LF M +G+R + VT+N LV
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
LC G DA + + +++ D +VIT T ++D + K G +A+ L+ +M ++
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRD---IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
+ D+ YN LING C++G + A M+ +G LPDV+TYNTL+N CK ++DE +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
+ +++ G+ D I+Y TIIQG G A+E M + P+I I Y
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-----PNIRTYSILLY 389
Query: 412 GRCGD--LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
G C + + A + + M + ++ T+N +I + G++ DA+ L + + G+ P
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
DV +Y +I C + LY +M G+ P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 41/419 (9%)
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G D+ ++N ++N LC+ A V+ +M + P+ T ++ I G+C+ N + A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+ L S M G RP+ V +N ++ CK GL+ DAV+
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE----------------------- 195
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
L++ M + ++ D V YN L+ G C +G S A M+ R
Sbjct: 196 ---------------LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
+P+VIT+ +++ K+GK EA Y +++ V PD +Y ++I GLC+HG + +A++
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
L M+ K +P+ +N +I+G+ + + + M G+ + T+N +I
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
+ G A + M P++ TY++L+ C + AL L++ M + I DI
Sbjct: 361 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
TY +I G C GN+++A ++F + GL D + + + + R ++ DK+ +++K
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 169/399 (42%), Gaps = 73/399 (18%)
Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
+LE+ + +M + RP P+ ++ ++ + D + LF M GI + ++N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
I+++ LC+ A+ +G+ M
Sbjct: 109 IVINCLCRCSRFVIALSVVGK--------------------------------------M 130
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
+ + D+V + LINGFC + A +M + GF PDV+ YNT+++ CK G +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
++A + + + GV D ++Y +++ GLC G A + M+ + +VP
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-------- 242
Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
NV TF A+I + G +A L +EM +
Sbjct: 243 ---------------------------NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
PDVFTYN LI C G + A Q+ D M+ +G PD++TY LI G C + E +
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
+F ++ GL D I + + + Y + D A++I +
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 145/292 (49%), Gaps = 8/292 (2%)
Query: 286 DMFQKNIQT----DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
D+F K IQ+ IV ++ +++ + + + F M G D+ +YN ++NCL
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
C+ + A G + K G PD ++ ++I G C + A + + M E P+
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
I+N IIDG + G +++A + D M GV ++ T+N+L+ G DA L ++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
M++ I P+V T+ +I G A++LY+EM RR + PD+ TY LI G C G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
+ EA+++ + T G D + + L + + K D+ R++ Q+ L+
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 42/254 (16%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
RC ++ D + ++I LC+ G++ A + M+ KG +PDV+T+N L+N CK ++
Sbjct: 273 RC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+ + REM++ + TYN I GY + D A +FS M + RPN T++IL+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
+ LC N +AL L+ +M +
Sbjct: 389 YGLC--------------------------------------MNWRVEKALVLFENMQKS 410
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
I+ DI YN++I+G C G++ A+ F + +G PDV++Y T+++ C++ + D++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 351 SHFYGVLSKTGVAP 364
Y + + G+ P
Sbjct: 471 DLLYRKMQEDGLLP 484
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 209/462 (45%), Gaps = 46/462 (9%)
Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS- 180
+ V+RD + K +A++ MI+ G +P V+T N +++ K GDLE+ D + EM
Sbjct: 210 LKVLRDSRMMNK-ASAVY--ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 181 -------------------------------EMRPSPNCAT---YNAFITGYCRVNELDK 206
+MR S T +N I GYC+ D
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
A + M N GI P T+NI + ALC G + DA + L + A DV++
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-------AAPDVVSYNT 379
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
LM Y K G +A L++D+ +I IV YN LI+G C +G++ A +M +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
PDVITY TL+ K G L A+ Y + + G+ PD +Y T G GD KA
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 387 EFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
M+ P+ I+NV IDG + G+L A + + G+ + T+ +I
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
G A +L EML ++P V TY +LI G + A Q EM +RG+ P+
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
++T+ L+ G C GN+ EA K++ G+ + + +L
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 190/392 (48%), Gaps = 8/392 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C G A + +M+ G P T+N + LC G ++ A ++ M+
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA--- 370
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
+P+ +YN + GY ++ + +A LF + I P+ VT+N L+ LC+ G L A
Sbjct: 371 -APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ E+ DVIT T L+ + KNG+ A ++++M +K I+ D AY
Sbjct: 430 RLKEEMTTQ---LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 304 NGFCLNGDISSAFAYFCQMLKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
G GD AF +M+ PD+ YN ++ LCK G L +A F + + G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
PD ++Y T+I+G +G AR ML K + P + V+I G+ + G L AF
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
M GV NV T NAL+ + G+I +A+ +M +GI P+ ++Y +LI +C
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
+ ++LY EML + I PD T+ L K
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 182/407 (44%), Gaps = 43/407 (10%)
Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
Y + + +K L F M G P+ NI++ L ++ A ++ +
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMI---EHGI 234
Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
VIT ++DS FK GD + +W +M ++NI+ V YN+LINGF NG + A
Sbjct: 235 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
+ M + GF ++N L+ CKQG D+A + G+ P +Y I LC
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
G I ARE L SM VV +N ++ GY + G A + D + + + ++
Sbjct: 355 DFGRIDDARELLSSMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 410
Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
T+N LI G++ A LK+EM IFPDV TY L+ G++ +A ++YDEM
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
Query: 498 LRRGITPDIITYT-----EL-------------------------------IKGHCARGN 521
LR+GI PD YT EL I G C GN
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
+ +A E KI +GL DH+ + + + Y + AR+++ + L
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R L D+ + VIR G+ A L +M++K P V+T+ L+ K G LE
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+A EM + PN T+NA + G C+ +D+A M GI PN+ ++ +L+
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 231 HALCKKGLLGDAVKFLGEVL 250
C + VK E+L
Sbjct: 663 SKNCDFEKWEEVVKLYKEML 682
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 214/457 (46%), Gaps = 38/457 (8%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+++ L +IG A ++ ++M +KG P+V+ +N L++ + G L KA + M
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
S +TYN I GYC+ + D A L M + G N+ + ++ LC + A+
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+F+GE+L + + T L+ K+G +AL LW K D N L+
Sbjct: 469 RFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF---------- 353
+G C G + AF ++L RG + D ++YNTL++ C + KLDEA F
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 354 -----YGVL--------------------SKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
Y +L + G+ PD +Y +I G C + +EF
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
M+ K+V P ++N +I Y R G LS A +R+ M G+S N T+ +LI +
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 705
Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
+ +A L +EM ++G+ P+VF Y LI LG + L EM + + P+ IT
Sbjct: 706 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 765
Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
YT +I G+ GN+ EA + +++ G+ D I ++
Sbjct: 766 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 19/460 (4%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
VI L + G+ A + KM+++G P ++T++ LV L + + A V++EM++
Sbjct: 313 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 372
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
PN YN I + L+KA+ + M + G+ T+N L+ CK G +A
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 432
Query: 243 VKFLGEVLA----DDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
+ L E+L+ + G TS + + S ++ DS AL +M +N+
Sbjct: 433 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS---------ALRFVGEMLLRNMSPGG 483
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
LI+G C +G S A + Q L +GF+ D T N LL+ LC+ GKLDEA
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ G D++SY T+I G C + +A FL M+++ + P+ + ++++I G
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
+ A D G+ +V+T++ +I + + EM+ + P+ YN
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 663
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
LI A C G + +AL+L ++M +GI+P+ TYT LIKG ++EA+ +F +++ G
Sbjct: 664 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 723
Query: 537 LAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRNK 572
L + + L Y ++ + K R++H K + NK
Sbjct: 724 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 763
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 195/422 (46%), Gaps = 3/422 (0%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
++ KG PDV +N CK G +E+A + +M E +PN T+N I G
Sbjct: 264 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 323
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
D+A M G+ P +T++ILV L + +GDA L E+ +VI
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG---FPPNVIV 380
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
L+DS+ + G +A+ + + M K + YN LI G+C NG +A +ML
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
GF + ++ +++ LC D A F G + ++P T+I GLC HG
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 500
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
KA E L K V + N ++ G G L AF I+ +L G + ++N LI
Sbjct: 501 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 560
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
+ +AF EM+ G+ PD +TY++LI N+ + A+Q +D+ R G+
Sbjct: 561 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 620
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
PD+ TY+ +I G C +E +E F ++ + + + + + L + Y R A ++
Sbjct: 621 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680
Query: 564 HQ 565
+
Sbjct: 681 RE 682
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 39/334 (11%)
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
AL +F +AN G+ P++ T NIL+ +L +
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVR------------------------------- 251
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
++FQ D+ K + D+ + IN FC G + A F +M + G
Sbjct: 252 --------ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
P+V+T+NT+++ L G+ DEA F + + G+ P I+Y +++GL I A
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
L M +K P ++N +ID + G L+ A I+DLM+S G+S T+N LI
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423
Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
+ G +A L KEML G + ++ +I C+ AL+ EML R ++P
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483
Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
T LI G C G +A E++ + G +D
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 517
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 3/310 (0%)
Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
D R A++ LC GK+ A ++++++ +G V D +++N L++ C L++A
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
+ EM + P+ TY+ I G +N++++A+ + NG+ P+ T+++++ CK
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
+ +F E+++ + + + L+ +Y ++G AL L DM K I +
Sbjct: 636 AERTEEGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 692
Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
Y LI G + + A F +M G P+V Y L++ K G++ +
Sbjct: 693 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 752
Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
+ V P++I+Y +I G G++ +A L M EK +VP+ + I GY + G
Sbjct: 753 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812
Query: 416 DLSNAFSIRD 425
+ AF D
Sbjct: 813 GVLEAFKGSD 822
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
+ G +PDV T++ +++ CK E+ EM PN YN I YCR L
Sbjct: 616 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 675
Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
AL L M + GI PN T+ L+ + + +A E+ + +V T
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYT 732
Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
L+D Y K G + L +M KN+ + + Y V+I G+ +G+++ A +M ++
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
G +PD ITY + KQG + EA F G D+ +Y II+G
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEA--FKG--------SDEENYAAIIEG 832
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 213/437 (48%), Gaps = 6/437 (1%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K + L +M G ++ T++ +N C+ L A ++ +M ++ P+ T N
Sbjct: 90 KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN 149
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
+ + G+C N + +A+ L M G +P+ VT LVH L + +AV + ++
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
D++T +++ K G+ AL L N M + I+ D+V YN +I+G C +
Sbjct: 210 G---CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
AF F +M +G PDV TYN L++CLC G+ +AS + + + PD + + +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 373 IQGLCIHGDIVKAREFLLSMLE-KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
I G +V+A + M++ K P+ +N +I G+ + + + M G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
+ N T+ LI + +A + K+M+ DG+ PD+ TYN+L+ CN G++ AL
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
+++ M +R + DI+TYT +I+ C G +++ ++F + G+ + + + + +
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Query: 552 RR--MKESDKARDIHQK 566
R +KE A + K
Sbjct: 507 CRKGLKEEADALFVEMK 523
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 218/437 (49%), Gaps = 6/437 (1%)
Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
I C ++ AL + KM++ G P ++T N L+N C + +A ++ +M EM
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
P+ T+ + G + N+ +A+ L M G +P+ VT+ +++ LCK+G A+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
L ++ + GK +DV+ ++D K A L+N M K I+ D+ YN LI+
Sbjct: 237 LLNKM---EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VA 363
C G S A ML++ PD++ +N L++ K+GKL EA Y + K+
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD ++Y T+I+G C + + + E M ++ +V + +I G+ + D NA +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
M+S GV ++ T+N L+ G++ A + + M + D+ TY +I A C
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
G + L+ + +G+ P+++TYT ++ G C +G +EA+ +F +++ G +
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 544 FRILKKRYRRMKESDKA 560
+ L + R+++ D+A
Sbjct: 534 YNTLIR--ARLRDGDEA 548
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 194/416 (46%), Gaps = 39/416 (9%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K A+ L +M+ KG PD++T+ ++N LCK G+ + A +++ +M + + + YN
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I G C+ +D A LF+ M GI+P+ T+N L+ LC G DA + L
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL------ 308
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+DM +KNI D+V +N LI+ F G +
Sbjct: 309 --------------------------------SDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 313 SSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
A + +M+K + PDV+ YNTL+ CK +++E + +S+ G+ + ++Y T
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
+I G D A+ M+ V P+ +N+++DG G++ A + + M
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
+ ++ T+ +I A + G + D + L + L G+ P+V TY ++ C G A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
L+ EM G P+ TY LI+ G+ + E+ ++++ G A D F ++
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 4/327 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D + +I LC + A L KM KG PDV T+N L++ LC G A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHA 232
++ +M E +P+ +NA I + + +L +A L+ M + P+ V +N L+
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
CK + + ++ E+ + +T T L+ +F+ D A ++ M +
Sbjct: 366 FCKYKRVEEGMEVFREM---SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
DI+ YN+L++G C NG++ +A F M KR D++TY T++ LCK GK+++
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
+ LS GV P+ ++Y T++ G C G +A + M E +P +N +I
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTF 439
R GD + + + M S G + + TF
Sbjct: 543 RDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 165/363 (45%), Gaps = 2/363 (0%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + AVI LC G+ AL L KM + DV+ +N +++ LCK ++ A
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ +M P+ TYN I+ C A L S M I P+ V N L+ A
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K+G L +A K E++ DV+ L+ + K + + ++ +M Q+ +
Sbjct: 332 KEGKLVEAEKLYDEMVKSK--HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+ V Y LI+GF D +A F QM+ G PD++TYN LL+ LC G ++ A +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+ K + D ++Y T+I+ LC G + + S+ K V P + ++ G+ R
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
G A ++ M G N T+N LI A R G + L KEM G D T+
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Query: 475 NLL 477
L+
Sbjct: 570 GLV 572
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 165/340 (48%), Gaps = 15/340 (4%)
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
GL GD VK + ++ + L+ + K ++L M I ++
Sbjct: 61 GLFGDMVK----------SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 110
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
Y++ IN FC +S A A +M+K G+ P ++T N+LLN C ++ EA
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ + G PD +++ T++ GL H +A + M+ K P+ + +I+G + G+
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
A ++ + M + ++V +N +I + + DAF L +M GI PDVFTYN
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK-IQTL 535
LI CN G A +L +ML + I PD++ + LI G + EAE+++ + +++
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 536 GLAIDHIPFRILKK---RYRRMKESDKA-RDIHQKWLLRN 571
D + + L K +Y+R++E + R++ Q+ L+ N
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 34/261 (13%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQ-KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
A+I GK+ A L +M++ K PDV+ +N L+ CK +E+ V REMS+
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
N TY I G+ + + D A +F M ++G+ P+ +T+NIL+ LC G +
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 242 A----------------------VKFLGEVLADDDG----------KATSDVITSTILMD 269
A ++ L + +DG +V+T T +M
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
+ + G K +A AL+ +M + + YN LI +GD +++ +M GF
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 330 DVITYNTLLNCLCKQGKLDEA 350
D T+ + N L G+LD++
Sbjct: 565 DASTFGLVTNML-HDGRLDKS 584
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
++ D + +I LC GK+ L + KG P+V+T+ +++ C+ G E+AD
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM E P PN TYN I R + + L M + G + T ++ + L
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 201/399 (50%), Gaps = 6/399 (1%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
KM++ G PD++T L+N C +E+A ++ +M EM P+ Y I C+
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
++ AL LF M N GIRP+ V + LV+ LC G DA L + K DVI
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR---KIKPDVI 248
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T L+D++ K G A L+N+M + +I +I Y LINGFC+ G + A F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
+G PDV+ Y +L+N CK K+D+A + +S+ G+ + I+Y T+IQG G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF---GVSSNVFTF 439
A+E M+ + V P +NV++ G + A I + M GV+ N++T+
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
N L+ G + A + ++M + + TY ++I C G + A+ L+ +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
+G+ P+++TYT +I G G EA +F K++ G++
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 227/459 (49%), Gaps = 11/459 (2%)
Query: 92 LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
L E LD M ++ P+ + D+ + + VI + K + L + G
Sbjct: 51 LQFNEALDLFTHMVESRPLPSII--DFTKLLNVIAKM---KKFDVVINLCDHLQIMGVSH 105
Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
D+ T N L+N C+ A + +M ++ P+ T+ + I G+C N +++A+ +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
+ M GI+P+ V + ++ +LCK G + A+ ++ ++ DV+ T L++
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM---ENYGIRPDVVMYTSLVNGL 222
Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
+G A +L M ++ I+ D++ +N LI+ F G A + +M++ P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
TY +L+N C +G +DEA + ++ G PD ++Y ++I G C + A +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
M +K + + +I G+G+ G + A + M+S GV N+ T+N L+ G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 452 IFDAFSLKKEML---LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
+ A + ++M +DG+ P+++TYN+L+ C G + AL ++++M +R + IIT
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
YT +I+G C G +K A +F + + G+ + + + +
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 184/377 (48%), Gaps = 11/377 (2%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
++E + + M + G ++ D + +I LC G + AL L +M G PDV
Sbjct: 158 MEEAMSMVNQMVEMG-----IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
+ + LVN LC G AD ++R M++ + P+ T+NA I + + + A L++
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
M I PN T+ L++ C +G + +A + L + G DV+ T L++ + K
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF--YLMETKG-CFPDVVAYTSLINGFCK 329
Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
A+ ++ +M QK + + + Y LI GF G + A F M+ RG P++ T
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389
Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
YN LL+CLC GK+ +A + + K GVAP+ +Y ++ GLC +G + KA
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
M ++ + + +II G + G + NA ++ + S GV NV T+ +I R G
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Query: 451 SIFDAFSLKKEMLLDGI 467
+A L ++M DG+
Sbjct: 510 LKHEAHVLFRKMKEDGV 526
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 142/279 (50%)
Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
+ D+ N+L+N FC + A ++ +M+K GF PD++T+ +L+N C +++EA
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
+ + G+ PD + Y TII LC +G + A M + P+ ++ +++G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
G +A S+ M + +V TFNALI A + G DA L EM+ I P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
FTY LI C G + A Q++ M +G PD++ YT LI G C + +A ++F +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
+ GL + I + L + + ++ + + A+++ + R
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 152/323 (47%), Gaps = 6/323 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + +++ LC G+ A L R M ++ PDV+T N L++ K G A+
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM M +PN TY + I G+C +D+A +F M G P+ V + L++
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK + DA+K E+ T + IT T L+ + + G A +++ M + +
Sbjct: 328 CKCKKVDDAMKIFYEM---SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKR---GFLPDVITYNTLLNCLCKQGKLDEA 350
+I YNVL++ C NG + A F M KR G P++ TYN LL+ LC GKL++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
+ + K + I+Y IIQG+C G + A S+ K V P + +I G
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 411 YGRCGDLSNAFSIRDLMLSFGVS 433
R G A + M GVS
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%)
Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
+AL L+ M + I+ + L+N + G D+ T N L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
NC C+ + AS F G + K G PD +++ ++I G C+ + +A + M+E +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
P+ ++ IID + G ++ A S+ D M ++G+ +V + +L+ G DA SL
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
+ M I PDV T+N LI A G A +LY+EM+R I P+I TYT LI G C
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
G + EA ++F ++T G D + + L + + K+ D A I
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 5/280 (1%)
Query: 87 FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
FNAL D +KE LD + + +R ++ + + ++I C+ G + A +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEM--IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
M KG PDV+ + L+N CK ++ A + EMS+ + N TY I G+ +V +
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
+ A +FS M + G+ PN T+N+L+H LC G + A+ ++ + ++ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
+L+ NG +AL ++ DM ++ + I+ Y ++I G C G + +A FC +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G P+V+TY T+++ L ++G EA + + + GV+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 209/440 (47%), Gaps = 4/440 (0%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
+C G + A L +M +G VPD +T+N +++ K+G L+ EM +M P+
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
TYNA I +C+ +L L + M NG++PN V+++ LV A CK+G++ A+KF
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
++ + T T L+D+ K G+ A L N+M Q ++ ++V Y LI+G C
Sbjct: 392 DM---RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
+ A F +M G +P++ +YN L++ K +D A L G+ PD +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
Y T I GLC I A+ + M E + I+ ++D Y + G+ + + D M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGH 486
+ V TF LI + + A + D G+ + + +I C
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
+ A L+++M+++G+ PD YT L+ G+ +GN+ EA + K+ +G+ +D + +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 547 LKKRYRRMKESDKARDIHQK 566
L + KAR ++
Sbjct: 689 LVWGLSHCNQLQKARSFLEE 708
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 195/436 (44%), Gaps = 19/436 (4%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
LW R + VP + L + L +G LE+A +M R P + N +
Sbjct: 180 VLWSTRNV----CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG------LLGDAVKFLGEVL 250
+ ++ + D F M G RP T+NI++ +CK+G L + +KF G V
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV- 294
Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
D +T ++D + K G + + +M + D++ YN LIN FC G
Sbjct: 295 --------PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
+ ++ +M G P+V++Y+TL++ CK+G + +A FY + + G+ P++ +Y
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
++I C G++ A ML+ V + +IDG + A + M +
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
GV N+ ++NALI + ++ A L E+ GI PD+ Y I C+L I A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
+ +EM GI + + YT L+ + GN E + +++ L + + + F +L
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 551 YRRMKESDKARDIHQK 566
+ K KA D +
Sbjct: 587 LCKNKLVSKAVDYFNR 602
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 178/402 (44%), Gaps = 3/402 (0%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
G + A+ KM + P + N L++ K+G + ++M P TY
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
N I C+ +++ A LF M G+ P+ VT+N ++ K G L D V F E+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-- 323
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
D DVIT L++ + K G L + +M ++ ++V+Y+ L++ FC G
Sbjct: 324 -KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
+ A ++ M + G +P+ TY +L++ CK G L +A + + GV + ++Y
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
+I GLC + +A E M V+P +N +I G+ + ++ A + + + G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
+ ++ + I I A + EM GI + Y L+ A G+ L
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
L DEM I ++T+ LI G C + +A + F +I
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 190/415 (45%), Gaps = 4/415 (0%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E D + A+I C GK+ L R+M G P+V++++ LV+ CK G +++A
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+M + PN TY + I C++ L A L + M G+ N VT+ L+ LC
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
+ +A + G++ D ++ + L+ + K + +AL L N++ + I+
Sbjct: 449 DAERMKEAEELFGKM---DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
D++ Y I G C I +A +M + G + + Y TL++ K G E H
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGR 413
+ + + +++ +I GLC + + KA ++ + + I+ +IDG +
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
+ A ++ + M+ G+ + + +L+ + G++ +A +L+ +M G+ D+
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
Y L+ + + A +EM+ GI PD + ++K H G + EA E+
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 172/363 (47%), Gaps = 12/363 (3%)
Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI------ 266
+M NG + + ++ I+ H L + DA L E++ DV+ ST
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 267 --LMDSYFKN----GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
+ D+ F G +A+ ++ M + + + N L++ F G +F
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
M+ G P V TYN +++C+CK+G ++ A + + G+ PD ++Y ++I G G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
+ F M + P+ +N +I+ + + G L M G+ NV +++
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
L+ A + G + A +M G+ P+ +TY LI A+C +G++ A +L +EML+
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
G+ +++TYT LI G C MKEAEE+F K+ T G+ + + L + + K D+A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 561 RDI 563
++
Sbjct: 492 LEL 494
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 177/354 (50%), Gaps = 4/354 (1%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R L + + ++I C G + A L +M+Q G +V+T+ L++ LC ++
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+A+ + +M PN A+YNA I G+ + +D+AL L + + GI+P+ + + +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
LC + +A K + + + KA S + T+ LMD+YFK+G+ + L L ++M +
Sbjct: 515 WGLCSLEKI-EAAKVVMNEMKECGIKANSLIYTT--LMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDE 349
+I+ +V + VLI+G C N +S A YF ++ G + + +++ LCK +++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A+ + + + G+ PD+ +Y +++ G G++++A M E + + + ++
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
G C L A S + M+ G+ + +++ G I +A L+ ++
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLM 745
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 7/278 (2%)
Query: 85 AVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
A +NAL + +N+DR + + R ++ D + I LC KI A +
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGR-GIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
+M + G + L + L++ K G+ + H++ EM E+ T+ I G C+
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 203 ELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
+ KA+ F+ ++N+ G++ N ++ LCK + A +++ D
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG---LVPDR 648
Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
T LMD FK G+ +ALAL + M + ++ D++AY L+ G + A ++ +
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
M+ G PD + ++L + G +DEA L K
Sbjct: 709 MIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 193/387 (49%), Gaps = 8/387 (2%)
Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
P+V+T++ ++ CK G+L+ A M SPN T+ I GYC+ +L+ A+ L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
+ M + N VT+ L+ CKKG + A + ++ D + + + T ++D
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED---RVEPNSLVYTTIIDG 277
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
+F+ GD A+ M + ++ DI AY V+I+G C NG + A M K +PD
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
++ + T++N K G++ A + Y L + G PD ++ T+I G+ +G + +A +
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
+EK+ ++ V+ID + GD + + G+ + F + + I + G
Sbjct: 398 --IEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
++ DAF LK M+ +G+ D+ Y LI + G + A Q++DEML GI+PD +
Sbjct: 453 NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFD 512
Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
LI+ + GNM A ++ +Q GL
Sbjct: 513 LLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 221/479 (46%), Gaps = 47/479 (9%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
+V+ +C G++ A + M + G PDV+++N L++ C+ GD+ A V+ +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 180 -------------------SEMRP---------------SPNCATYNAFITGYCRVNELD 205
S+M+ SPN TY+ +I +C+ EL
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
AL F +M + + PN VT L+ CK G L AV E+ + + +V+T T
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM---RRVRMSLNVVTYT 237
Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
L+D + K G+ +A +++ M + ++ + + Y +I+GF GD +A + +ML +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
G D+ Y +++ LC GKL EA+ + K+ + PD + + T++ G + A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS-SNVFTFNALIL 444
++E+ P+ + +IDG + G L A ++ F + +N + LI
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA------IVYFCIEKANDVMYTVLID 411
Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
A + G + L ++ G+ PD F Y I C G++ A +L M++ G+
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
D++ YT LI G ++G M EA +VF ++ G++ D F +L + Y + A D+
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 193/382 (50%), Gaps = 8/382 (2%)
Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
I C G++ AL M + P+V+T L++ CK GDLE A + +EM +R
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
S N TY A I G+C+ E+ +A ++S M + + PN + + ++ ++G +A+K
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
FL ++L + D+ +++ NG +A + DM + ++ D+V + ++N
Sbjct: 290 FLAKML---NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
+ +G + +A + ++++RGF PDV+ +T+++ + K G+L EA ++ +
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI-----EKA 401
Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
+ + Y +I LC GD ++ + E +VP+ ++ I G + G+L +AF ++
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
M+ G+ ++ + LI G + +A + EML GI PD ++LLI A
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 485 GHIHLALQLYDEMLRRGITPDI 506
G++ A L +M RRG+ +
Sbjct: 522 GNMAAASDLLLDMQRRGLVTAV 543
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 179/348 (51%), Gaps = 8/348 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C G + A+ L ++M + +V+T+ L++ CK G++++A+ + M E R
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN Y I G+ + + D A+ + M N G+R + + +++ LC G L +A
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ + ++ D D++ T +M++YFK+G A+ +++ + ++ + D+VA + +I
Sbjct: 324 EIVEDMEKSD---LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G NG + A YFC +++ + + Y L++ LCK+G E + +S+ G+
Sbjct: 381 DGIAKNGQLHEAIVYFC--IEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD+ Y + I GLC G++V A + M+++ ++ + + +I G G + A +
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
D ML+ G+S + F+ LI A + G++ A L +M G+ V
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 188/434 (43%), Gaps = 72/434 (16%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
++ +G P + N +V+ +CK+G ++ A+ ++ M P+ +YN+ I G+CR +
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 204 LDKA-LHLFSTMANNGI--RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
+ A L L S A++G +P+ V+ N L + K +L + ++G +L
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML---------- 156
Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
K ++V Y+ I+ FC +G++ A F
Sbjct: 157 -----------------------------KCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
M + P+V+T+ L++ CK G L+ A Y + + ++ + ++Y +I G C G
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
++ +A E M+E V P ++ IIDG+ + GD NA ML+ G+ ++ +
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
+I G + +A + ++M + PD+ + ++ A G + A+ +Y +++ R
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 501 GITPDIIT------------------------------YTELIKGHCARGNMKEAEEVFA 530
G PD++ YT LI C G+ E E +F+
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 531 KIQTLGLAIDHIPF 544
KI GL D +
Sbjct: 428 KISEAGLVPDKFMY 441
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 164/367 (44%), Gaps = 42/367 (11%)
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
+L + + + G P+R + N +V +CK LG+V K D++ S
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCK----------LGQV------KFAEDIVHS-- 81
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM-LKR 325
M + + D+++YN LI+G C NGDI SA +
Sbjct: 82 --------------------MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 326 GFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
GF+ PD++++N+L N K LDE + GV+ K +P+ ++Y T I C G++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQ 180
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A + SM ++ P + +IDGY + GDL A S+ M +S NV T+ ALI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
+ G + A + M+ D + P+ Y +I G A++ +ML +G+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
DI Y +I G C G +KEA E+ ++ L D + F + Y + A ++
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 564 HQKWLLR 570
+ K + R
Sbjct: 361 YHKLIER 367
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 43/285 (15%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + +I LC GK+ A + M + VPD++ ++N K G ++ A
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ ++ E P+ + I G + +L +A+ F + N V + +L+ AL
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTVLIDAL 413
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK+ GD + L++ + + +
Sbjct: 414 CKE--------------------------------------GDFIEVERLFSKISEAGLV 435
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D Y I G C G++ AF +M++ G L D++ Y TL+ L +G + EA
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
+ + +G++PD + +I+ G++ A + LL M + +V
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 223/449 (49%), Gaps = 18/449 (4%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ V+ LC K+ A+ R K P V++ N +++ CK+G ++ A +
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ ++N I G C V + +AL L S M +G+ P+ VT+NIL G++
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-IVAY 299
A + + ++L D + DVIT TIL+ + G+ L L DM + + + I+
Sbjct: 352 GAWEVIRDML---DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
+V+++G C G I A + F QM G PD++ Y+ +++ LCK GK D A Y +
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
+ P+ ++ ++ GLC G +++AR L S++ + ++N++IDGY + G +
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528
Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
A + +++ G++ +V TFN+LI + +I +A + + L G+ P V +Y L+
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588
Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE------AEEVFAK-- 531
A N G+ +L EM GI P +TY+ + KG C RG E E +F K
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 647
Query: 532 -----IQTLGLAIDHIPFRILKKRYRRMK 555
+++ G+ D I + + + R+K
Sbjct: 648 QGLRDMESEGIPPDQITYNTIIQYLCRVK 676
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 8/398 (2%)
Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
T++ +V+ LC+ LE A +R P+ ++N+ ++GYC++ +D A F T+
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290
Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--ATSDVITSTILMDSYF 272
G+ P+ +HNIL++ LC G + +A++ LA D K D +T IL +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALE-----LASDMNKHGVEPDSVTYNILAKGFH 345
Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDV 331
G A + DM K + D++ Y +L+ G C G+I ML RGF L +
Sbjct: 346 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 405
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
I + +L+ LCK G++DEA + + G++PD ++Y +I GLC G A
Sbjct: 406 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 465
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
M +K ++P ++ G + G L A S+ D ++S G + ++ +N +I + G
Sbjct: 466 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 525
Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
I +A L K ++ GI P V T+N LI C +I A ++ D + G+ P +++YT
Sbjct: 526 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585
Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
L+ + GN K +E+ +++ G+ ++ + ++ K
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 623
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 214/474 (45%), Gaps = 16/474 (3%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
++C L H +I LCL G I AL L M + G PD +T+N L +G +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 350
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH-NI 228
A VIR+M + SP+ TY + G C++ +D L L M + G N + ++
Sbjct: 351 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 410
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
++ LCK G + +A+ ++ AD + D++ +I++ K G AL L+++M
Sbjct: 411 MLSGLCKTGRIDEALSLFNQMKADG---LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
K I + + L+ G C G + A + ++ G D++ YN +++ K G ++
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
EA + V+ +TG+ P ++ ++I G C +I +AR+ L + + P + ++
Sbjct: 528 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 587
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS-----------IFDAFS 457
D Y CG+ + +R M + G+ T++ + RG IF+
Sbjct: 588 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 647
Query: 458 LK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
++M +GI PD TYN +I C + H+ A + M R + TY LI
Sbjct: 648 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 707
Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
C G +++A+ +Q +++ + L K + + + A + + L R
Sbjct: 708 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 761
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 21/453 (4%)
Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG-TVPDVLTHNYL 159
++ M D G L D + ++ C G I L L + M+ +G + ++ + +
Sbjct: 357 IRDMLDKG-----LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
++ LCK G +++A + +M SP+ Y+ I G C++ + D AL L+ M + I
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 471
Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
PN TH L+ LC+KG+L +A L +++ + T D++ I++D Y K+G +
Sbjct: 472 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE---TLDIVLYNIVIDGYAKSGCIEE 528
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
AL L+ + + I + +N LI G+C +I+ A + G P V++Y TL++
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---IHGD---IVKAREF----- 388
G + G+ P ++Y I +GLC H + +++ R F
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 648
Query: 389 -LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
L M + + P+ +N II R LS AF ++M S + ++ T+N LI +
Sbjct: 649 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 708
Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
G I A S + + F Y LI A C G +A++L+ ++L RG I
Sbjct: 709 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 768
Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
Y+ +I C R + E++ F + + G++ D
Sbjct: 769 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 203/458 (44%), Gaps = 86/458 (18%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
RK G V D+L +L + L + D + +++++M + + + +YN+ + +
Sbjct: 160 RKWESTGLVWDMLL--FLSSRLRMVDD---SLYILKKMKDQNLNVSTQSYNSVLYHF--- 211
Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
E DK ++ + + N T++ +V LC++ L DAV FL TS+
Sbjct: 212 RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFL----------RTSE- 256
Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
W K+I +V++N +++G+C G + A ++FC
Sbjct: 257 ----------------------W-----KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
+LK G +P V ++N L+N LC G + EA ++K GV PD ++Y + +G + G
Sbjct: 290 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 349
Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN-VFTFN 440
I A E + ML+K + P+ + +++ G + G++ + MLS G N + +
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409
Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
++ + G I +A SL +M DG+ PD+ Y+++I C LG +AL LYDEM +
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 501 GITP-----------------------------------DIITYTELIKGHCARGNMKEA 525
I P DI+ Y +I G+ G ++EA
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529
Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
E+F + G+ F L Y + + +AR I
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 567
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 184/424 (43%), Gaps = 30/424 (7%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
+ E L M+ G L D + VI LC GK ALWL +M K +P+
Sbjct: 421 IDEALSLFNQMKADG-----LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 475
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
TH L+ LC+ G L +A ++ + + + YN I GY + +++AL LF
Sbjct: 476 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 535
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
+ GI P+ T N L++ CK + +A K L + G A S V++ T LMD+Y
Sbjct: 536 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL--YGLAPS-VVSYTTLMDAYAN 592
Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------LNGDISSAFAYFCQ----- 321
G+ L +M + I V Y+V+ G C N + C+
Sbjct: 593 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 652
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
M G PD ITYNT++ LC+ L A F ++ + +Y +I LC++G
Sbjct: 653 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 712
Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
I KA F+ S+ E++V + +I + GD A + +L G + ++ ++A
Sbjct: 713 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 772
Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
+I R + ++ ML GI PD+ ++I + +L ++ G
Sbjct: 773 VINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKSD----------ELLSWTIKWG 822
Query: 502 ITPD 505
+ PD
Sbjct: 823 LLPD 826
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 219/449 (48%), Gaps = 7/449 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + VI DL GK+ AL L +M ++G PDV +N L++ K D + A
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 174 HVI-REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
+ R + + PN T+N I+G + +D L ++ M N + T++ L+H
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
LC G + A E+ D+ KA+ DV+T ++ + + G ++L LW M KN
Sbjct: 300 LCDAGNVDKAESVFNEL---DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
+IV+YN+LI G NG I A + M +G+ D TY ++ LC G +++A
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
+ +G D +Y +II LC + +A + M + V H+ N +I G
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 413 RCGDLSNA-FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
R L A F +R+ M G V ++N LI + G +A + KEML +G PD+
Sbjct: 476 RDSRLGEASFFLRE-MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
TY++L+ C I LAL+L+ + L+ G+ D++ + LI G C+ G + +A V A
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA 560
++ + + + L + + ++ +S++A
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 148/284 (52%), Gaps = 3/284 (1%)
Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
I LC+ G + AL + +++ G DV + +++ LCK LE+A ++++EMS+
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
N NA I G R + L +A M NG RP V++NIL+ LCK G G+A
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
F+ E+L + D+ T +IL+ ++ AL LW+ Q ++TD++ +N+LI+
Sbjct: 521 FVKEML---ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
G C G + A M R +++TYNTL+ K G + A+ +G + K G+ P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
D ISY TI++GLC+ + A EF + P + WN+++
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 186/401 (46%), Gaps = 4/401 (0%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E D + ++I LC G + A + ++ ++ DV+T+N ++ C+ G ++++
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE 346
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ R M E + S N +YN I G ++D+A ++ M G ++ T+ I +H LC
Sbjct: 347 LWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
G + A+ + EV + DV ++D K +A L +M + ++
Sbjct: 406 VNGYVNKALGVMQEV---ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+ N LI G + + A + +M K G P V++YN L+ LCK GK EAS F
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+ + G PD +Y ++ GLC I A E L+ + + + N++I G
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
G L +A ++ M ++N+ T+N L+ + G A + M G+ PD+ +Y
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
N ++ C + A++ +D+ GI P + T+ L++
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 188/435 (43%), Gaps = 38/435 (8%)
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G P++ T+N L+ CK + EKA + M + P+ +Y+ I + +LD A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
L LF M+ G+ P+ +NIL+ K+ A++ +L +D +V T I+
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL--EDSSVYPNVKTHNIM 261
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+ K G L +W M Q + D+ Y+ LI+G C G++ A + F ++ +R
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
DV+TYNT+L C+ GK+ E+ + ++ + + +SY +I+GL +G I +A
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATM 380
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF-------- 439
M K + + + I G G ++ A + + S G +V+ +
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 440 ---------------------------NALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
NALI R + +A +EM +G P V
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
+YN+LI C G A EML G PD+ TY+ L+ G C + A E++ +
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 533 QTLGLAIDHIPFRIL 547
GL D + IL
Sbjct: 561 LQSGLETDVMMHNIL 575
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 11/307 (3%)
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGF 306
E++ + K DV S I +Y KN QAL ++ M + + I +YN L+N F
Sbjct: 67 ELIRSQECKCDEDVALSVI--KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 307 CLNGD---ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ S FAYF G P++ TYN L+ CK+ + ++A F + K G
Sbjct: 125 VEAKQWVKVESLFAYF---ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD SY T+I L G + A E M E+ V P+ +N++IDG+ + D A +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 424 RDLMLS-FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
D +L V NV T N +I ++ G + D + + M + D++TY+ LI C
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
+ G++ A +++E+ R + D++TY ++ G C G +KE+ E++ +I +++ +
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIV 360
Query: 543 PFRILKK 549
+ IL K
Sbjct: 361 SYNILIK 367
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
LETD H +I LC GK+ A+ + M + +++T+N L+ K+GD +A
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ M +M P+ +YN + G C + A+ F N+GI P T NILV A+
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Query: 234 CKK 236
+
Sbjct: 685 VNR 687
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 198/380 (52%), Gaps = 9/380 (2%)
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
++ ++MI++ P+V T N ++N LCK G + KA V+ +M SPN +YN I GY
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 199 CRV---NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
C++ ++ KA + M N + PN T NIL+ K L ++K E+L D
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD-- 326
Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
+VI+ L++ G +A+++ + M +Q +++ YN LINGFC N + A
Sbjct: 327 -VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
F + +G +P YN L++ CK GK+D+ + + G+ PD +Y +I G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
LC +G+I A++ L L +P+ ++++++GY R G+ A + M G+
Sbjct: 446 LCRNGNIEAAKK-LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLY 494
T+N ++ + G++ A +++ +M + + +V +YN+L+ G + A L
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 495 DEMLRRGITPDIITYTELIK 514
+EML +G+ P+ ITY E++K
Sbjct: 565 NEMLEKGLVPNRITY-EIVK 583
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 199/387 (51%), Gaps = 24/387 (6%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI---GDLEKADHVIREMS 180
VI LC GK+ A + M G P+V+++N L++ CK+ G + KAD V++EM
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
E SPN T+N I G+ + + L ++ +F M + ++PN +++N L++ LC G +
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A+ ++++ ++IT L++ + KN +AL ++ + + YN
Sbjct: 349 EAISMRDKMVS---AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+LI+ +C G I FA +M + G +PDV TYN L+ LC+ G ++ A + L+
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ PD +++ +++G C G+ KA L M + + P +N+++ GY + G+L A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 421 FSIRDLM-LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
++R M + NV ++N L+ ++ G + DA L EML G+ P+ TY +
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI--- 581
Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDI 506
+ +EM+ +G PDI
Sbjct: 582 -------------VKEEMVDQGFVPDI 595
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 194/382 (50%), Gaps = 8/382 (2%)
Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
++V +EM + PN T+N I C+ +++KA + M G PN V++N L+
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 233 LCKKGLLGDAVK---FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
CK G G K L E++ +D + ++ T IL+D ++K+ + ++ ++ +M
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVEND---VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++++ ++++YN LING C G IS A + +M+ G P++ITYN L+N CK L E
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A +G + G P Y +I C G I M + +VP+ +N +I
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
G R G++ A + D + S G+ ++ TF+ L+ R G A L KEM G+ P
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYTELIKGHCARGNMKEAEEV 528
TYN+++ C G++ A + +M + R + ++ +Y L++G+ +G +++A +
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563
Query: 529 FAKIQTLGLAIDHIPFRILKKR 550
++ GL + I + I+K+
Sbjct: 564 LNEMLEKGLVPNRITYEIVKEE 585
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 153/297 (51%), Gaps = 4/297 (1%)
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
LM + K ++ +M ++ IQ ++ +NV+IN C G ++ A M G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 327 FLPDVITYNTLLNCLCK---QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
P+V++YNTL++ CK GK+ +A + + V+P+ ++ +I G ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
+ + ML++ V P +N +I+G G +S A S+RD M+S GV N+ T+NALI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
+ + +A + + G P YN+LI A C LG I L +EM R GI
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
PD+ TY LI G C GN++ A+++F ++ + GL D + F IL + Y R ES KA
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKA 489
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 154/300 (51%), Gaps = 27/300 (9%)
Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
L+ D + +V ++I LC GGKI A+ +R KM+ G P+++T+N L+N CK L
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
++A + + P YN I YC++ ++D L M GI P+ T+N L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC+ G + A K ++ + K D++T ILM+ Y + G+ +A L +M +
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTS----KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLD 348
++ + YN+++ G+C G++ +A QM K R +V +YN LL ++GKL+
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNV 406
+A+ + + G+ P++I+Y +IVK M+++ VP E H++NV
Sbjct: 559 DANMLLNEMLEKGLVPNRITY-----------EIVKEE-----MVDQGFVPDIEGHLFNV 602
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 267 LMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
+D + +NG Q ++++ + N+ + + ++L+ + N F F +
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182
Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
G+ ++ L+ L K+ + + + Y + + + P+ ++ +I LC G + KA
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
R+ + M P +N +IDGY G G + A ++ M+ VS N+ TFN L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
I + ++ + + KEML + P+V +YN LI CN G I A+ + D+M+ G+
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
P++ITY LI G C +KEA ++F ++ G
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 24/239 (10%)
Query: 93 ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
+LKE LD +++ G V T R + +I C GKI L+ +M ++G VPD
Sbjct: 381 MLKEALDMFGSVKGQGAVPTT-----RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
V T+N L+ LC+ G++E A + +++ + P+ T++ + GYCR E KA L
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
M+ G++P +T+NI++ CK+G L A ++ + + + +V + +L+ Y
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM--EKERRLRMNVASYNVLLQGYS 552
Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
+ G A L N+M +K + + + Y ++ +M+ +GF+PD+
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKE----------------EMVDQGFVPDI 595
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
+G + + L++A + D + KEM+ I P+VFT+N++I A C G ++
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHC---ARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
A + ++M G +P++++Y LI G+C G M +A+ V ++ ++ + F I
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 547 L 547
L
Sbjct: 302 L 302
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 192/388 (49%), Gaps = 3/388 (0%)
Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
V DV + L+ C+ G++EK+ ++ E++E SPN Y I G C+ E++KA
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
LF M G+ N T+ +L++ L K G+ + ++ +DG ++ T +M+
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM--QEDG-VFPNLYTYNCVMN 276
Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
K+G A ++++M ++ + +IV YN LI G C ++ A QM G P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
++ITYNTL++ C GKL +A L G++P ++Y ++ G C GD A + +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
M E+ + P + ++ID + R ++ A +R M G+ +V T++ LI
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
G + +A L K M+ P+ YN +I C G + AL+L EM + + P++ +Y
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGL 537
+I+ C KEAE + K+ G+
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 218/458 (47%), Gaps = 8/458 (1%)
Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
T +T +R + +I + ++ +M+ G VP NYL+ + +
Sbjct: 89 TSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQW 148
Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
E ++ + + ++ I G C E++K+ L + G PN V + L+
Sbjct: 149 WSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 233 LCKKGLLGDAVKFLGEVLADDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
CKKG + A E+ GK ++ T T+L++ FKNG K Q ++ M +
Sbjct: 208 CCKKGEIEKAKDLFFEM-----GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
+ ++ YN ++N C +G AF F +M +RG +++TYNTL+ LC++ KL+EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
+ + G+ P+ I+Y T+I G C G + KA + + + P +N+++ G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
+ R GD S A + M G+ + T+ LI R ++ A L+ M G+ PD
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
V TY++LI C G ++ A +L+ M+ + P+ + Y +I G+C G+ A ++
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
+++ LA + +R + + + ++S +A + +K +
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 188/383 (49%), Gaps = 5/383 (1%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I+ C G+I + L ++ + G P+V+ + L++ CK G++EKA + EM ++
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
N TY I G + + ++ M +G+ PN T+N +++ LCK G DA
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ E+ + + +++T L+ + +A + + M I +++ YN LI
Sbjct: 289 QVFDEM---RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 304 NGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
+GFC G + A + C+ LK RG P ++TYN L++ C++G A+ + + G+
Sbjct: 346 DGFCGVGKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P +++Y +I ++ KA + LSM E +VP+ H ++V+I G+ G ++ A
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
+ M+ N +N +IL + GS + A L KEM + P+V +Y +I C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 483 NLGHIHLALQLYDEMLRRGITPD 505
A +L ++M+ GI P
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPS 547
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 93 ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
IL + R M +R ++E D + +I C+ G++ A L + M++K
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
P+ + +N ++ CK G +A +++EM E +PN A+Y I C+ + +A
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 208 LHLFSTMANNGIRPNRVTHNILVHA 232
L M ++GI P+ +++ A
Sbjct: 533 ERLVEKMIDSGIDPSTSILSLISRA 557
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 3/374 (0%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
KM++ G P ++T L+N C+ ++A ++ M PN YN I G C+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+L+ AL +F M GIR + VT+N L+ L G DA + L +++ K +VI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR---KIDPNVI 255
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T L+D++ K G+ +A L+ +M ++++ ++ YN LINGFC++G + A F M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
+ +G PDV+TYNTL+ CK ++++ + ++ G+ D +Y T+I G C G +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
A++ M++ V P+ +N+++D G + A + + + + ++ T+N +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
I R + +A+ L + + G+ PD Y +I C G A +L M G
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 503 TPDIITYTELIKGH 516
P Y E ++ H
Sbjct: 496 MPSERIYDETLRDH 509
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 208/423 (49%), Gaps = 8/423 (1%)
Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
D+ R + VI + K ++L KM G D+ + L++ C+ L A +
Sbjct: 80 VDFTRVLTVIAKM---NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
+ +M ++ P+ T + + G+C+ N +A+ L +M G PN V +N +++ LCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 236 KGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
L +A+ EV + K +D +T L+ +G A L DM ++ I
Sbjct: 197 NRDLNNAL----EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+++ + LI+ F G++ A + +M++R +P+V TYN+L+N C G L +A + +
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
++ G PD ++Y T+I G C + + M + +V + +N +I GY +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
G L+ A + + M+ GVS ++ T+N L+ G I A + +++ + D+ TY
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
N++I C + A L+ + R+G+ PD I Y +I G C +G +EA+++ +++
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Query: 535 LGL 537
G
Sbjct: 493 DGF 495
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 214/409 (52%), Gaps = 12/409 (2%)
Query: 156 HNY---LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
H+Y L NEL I + A + EM + RP P+ + +T ++N+ D ++L+
Sbjct: 45 HHYRERLRNELHCI-KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYH 103
Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
M N GI + + IL+H C+ L A+ LG+++ G S V ++L + F
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL--GFRPSIVTLGSLL--NGF 159
Query: 273 KNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
G++FQ A++L + M ++V YN +ING C N D+++A F M K+G D
Sbjct: 160 CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADA 219
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
+TYNTL++ L G+ +A+ + K + P+ I + +I G++++AR
Sbjct: 220 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 279
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
M+ +SVVP +N +I+G+ G L +A + DLM+S G +V T+N LI +
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
+ D L EM G+ D FTYN LI C G +++A ++++ M+ G++PDI+TY
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399
Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
L+ C G +++A + +Q + +D I + I+ + R ++KE+
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 208/437 (47%), Gaps = 16/437 (3%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K A L +M+Q +P ++ ++ + K+ + ++ +M + S + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I +CR + L AL L M G RP+ VT L++ C+ +AV + + D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--D 176
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
G + VI +T++ + KN D AL ++ M +K I+ D V YN LI+G +G
Sbjct: 177 GFGFVPNVVIYNTVI-NGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
+ A M+KR P+VI + L++ K+G L EA + Y + + V P+ +Y ++
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G CIHG + A+ M+ K P+ +N +I G+ + + + + M G+
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
+ FT+N LI + G + A + M+ G+ PD+ TYN+L+ CN G I AL
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-------- 544
+ +++ + + DIITY +I+G C +KEA +F + G+ D I +
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 545 -----RILKKRYRRMKE 556
R K RRMKE
Sbjct: 476 RKGLQREADKLCRRMKE 492
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 3/292 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + +I L G+ A L R M+++ P+V+ L++ K G+L +A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +EM PN TYN+ I G+C L A ++F M + G P+ VT+N L+
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK + D +K E+ D T L+ Y + G A ++N M +
Sbjct: 335 CKSKRVEDGMKLFCEMTYQG---LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
DIV YN+L++ C NG I A + K D+ITYN ++ LC+ KL EA
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
+ L++ GV PD I+Y T+I GLC G +A + M E +P I++
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
+ L++ M I D+ ++ +LI+ FC +S A A +M+K GF P ++T +LLN
Sbjct: 98 VIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLN 157
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
C+ + EA + G P+ + Y T+I GLC + D+ A E M +K +
Sbjct: 158 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 217
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
+ +N +I G G ++A + M+ + NV F ALI + G++ +A +L
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
KEM+ + P+VFTYN LI C G + A ++D M+ +G PD++TY LI G C
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
+++ ++F ++ GL D + L Y + + + A+ + + +
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
V C + D + ++ LC GKI AL + + + D++T+N ++ LC+ L
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
++A + R ++ P+ Y I+G CR +A L M +G P+
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,370,896
Number of Sequences: 539616
Number of extensions: 9053052
Number of successful extensions: 37640
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 25561
Number of HSP's gapped (non-prelim): 3573
length of query: 572
length of database: 191,569,459
effective HSP length: 123
effective length of query: 449
effective length of database: 125,196,691
effective search space: 56213314259
effective search space used: 56213314259
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)