Query 008251
Match_columns 572
No_of_seqs 532 out of 4323
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 21:46:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxv_A 70 kDa peptidyl-prolyl 100.0 6.2E-66 2.1E-70 527.9 28.9 355 27-383 1-355 (356)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 2.6E-56 8.8E-61 475.6 46.6 387 151-553 29-422 (457)
3 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 6.2E-43 2.1E-47 372.3 25.2 375 35-504 29-407 (457)
4 1q1c_A FK506-binding protein 4 100.0 8.8E-40 3E-44 321.0 28.6 223 35-264 49-276 (280)
5 1p5q_A FKBP52, FK506-binding p 100.0 8.3E-37 2.8E-41 312.0 38.6 278 264-551 19-299 (336)
6 2if4_A ATFKBP42; FKBP-like, al 100.0 1.4E-37 4.8E-42 317.9 24.8 277 269-549 48-331 (338)
7 3jxv_A 70 kDa peptidyl-prolyl 100.0 5.7E-37 2E-41 313.4 27.1 220 35-261 125-354 (356)
8 1q1c_A FK506-binding protein 4 100.0 2.5E-36 8.6E-41 296.4 29.8 223 151-389 49-280 (280)
9 2if4_A ATFKBP42; FKBP-like, al 99.9 6.1E-26 2.1E-30 231.6 14.4 295 22-517 34-334 (338)
10 1yat_A FK506 binding protein; 99.9 8.1E-24 2.8E-28 179.3 15.3 111 33-144 2-113 (113)
11 3kz7_A FK506-binding protein 3 99.9 1.3E-23 4.5E-28 179.8 15.1 109 35-143 2-118 (119)
12 3o5e_A Peptidyl-prolyl CIS-tra 99.9 1.2E-23 4E-28 185.6 15.0 111 35-145 33-143 (144)
13 3o5q_A Peptidyl-prolyl CIS-tra 99.9 1E-23 3.5E-28 182.5 13.8 111 35-145 17-127 (128)
14 1r9h_A FKB-6, FK506 binding pr 99.9 1.1E-23 3.9E-28 183.7 13.8 112 35-146 12-123 (135)
15 2y78_A Peptidyl-prolyl CIS-tra 99.9 3.7E-23 1.3E-27 179.6 15.3 110 33-143 24-133 (133)
16 3b7x_A FK506-binding protein 6 99.9 5.5E-24 1.9E-28 185.5 10.0 126 18-144 5-133 (134)
17 2f4e_A ATFKBP42; FKBP-like, al 99.9 5.3E-23 1.8E-27 187.9 16.5 130 18-148 30-163 (180)
18 2ppn_A FK506-binding protein 1 99.9 3.4E-23 1.2E-27 173.7 13.2 106 38-143 1-106 (107)
19 2lgo_A FKBP; infectious diseas 99.9 4.2E-23 1.4E-27 178.6 13.2 111 33-143 18-130 (130)
20 4dip_A Peptidyl-prolyl CIS-tra 99.9 1.4E-22 4.8E-27 174.8 14.6 111 33-145 8-123 (125)
21 1jvw_A Macrophage infectivity 99.9 1E-22 3.4E-27 183.0 12.4 111 32-145 32-143 (167)
22 2lkn_A AH receptor-interacting 99.9 6.1E-23 2.1E-27 182.5 10.4 114 34-148 7-161 (165)
23 3oe2_A Peptidyl-prolyl CIS-tra 99.9 2.5E-22 8.5E-27 187.0 14.4 106 33-144 113-218 (219)
24 3uf8_A Ubiquitin-like protein 99.9 3.2E-22 1.1E-26 187.1 15.0 131 12-143 74-209 (209)
25 2vn1_A 70 kDa peptidylprolyl i 99.9 6.4E-22 2.2E-26 171.6 15.3 112 33-145 11-127 (129)
26 2awg_A 38 kDa FK-506 binding p 99.9 9.3E-22 3.2E-26 167.8 15.0 108 33-144 8-117 (118)
27 2jwx_A FKBP38NTD, FK506-bindin 99.9 6.8E-22 2.3E-26 175.6 14.6 110 33-147 38-151 (157)
28 1u79_A FKBP-type peptidyl-prol 99.9 1.7E-22 5.8E-27 175.0 10.5 111 32-143 7-128 (129)
29 1fd9_A Protein (macrophage inf 99.9 5.7E-22 1.9E-26 185.0 14.3 111 32-145 101-211 (213)
30 1p5q_A FKBP52, FK506-binding p 99.9 2.2E-21 7.6E-26 197.6 16.5 271 146-510 18-293 (336)
31 1q6h_A FKBP-type peptidyl-prol 99.9 2.2E-21 7.4E-26 182.3 15.0 107 33-143 117-223 (224)
32 3rkv_A Putative peptidylprolyl 99.9 2E-21 6.7E-26 175.8 13.7 154 392-545 4-161 (162)
33 2d9f_A FK506-binding protein 8 99.9 1.9E-21 6.6E-26 169.6 13.0 113 32-148 11-126 (135)
34 2pbc_A FK506-binding protein 2 99.8 1.8E-20 6.1E-25 155.5 12.0 96 51-146 4-99 (102)
35 3o5e_A Peptidyl-prolyl CIS-tra 99.8 5.3E-20 1.8E-24 162.2 15.3 115 263-382 26-142 (144)
36 1r9h_A FKB-6, FK506 binding pr 99.8 5E-20 1.7E-24 160.6 13.6 118 151-274 12-135 (135)
37 2lkn_A AH receptor-interacting 99.8 1.2E-20 4.2E-25 167.7 9.4 87 267-355 7-96 (165)
38 2f4e_A ATFKBP42; FKBP-like, al 99.8 1E-19 3.5E-24 166.1 15.3 127 269-399 48-179 (180)
39 3o5q_A Peptidyl-prolyl CIS-tra 99.8 1.7E-19 5.9E-24 155.8 14.5 110 268-382 17-126 (128)
40 3kz7_A FK506-binding protein 3 99.8 2.7E-19 9.2E-24 152.9 15.5 112 269-382 3-119 (119)
41 2fbn_A 70 kDa peptidylprolyl i 99.8 1E-18 3.5E-23 163.4 20.3 178 374-551 13-191 (198)
42 4gco_A Protein STI-1; structur 99.8 7E-19 2.4E-23 152.2 14.3 114 397-525 11-124 (126)
43 2jwx_A FKBP38NTD, FK506-bindin 99.8 8.8E-19 3E-23 155.5 13.0 110 149-263 39-150 (157)
44 3b7x_A FK506-binding protein 6 99.8 3.9E-19 1.3E-23 154.7 10.6 115 262-382 18-133 (134)
45 2awg_A 38 kDa FK-506 binding p 99.8 2.5E-18 8.6E-23 146.4 15.2 112 262-382 5-117 (118)
46 2hr2_A Hypothetical protein; a 99.8 6.3E-19 2.1E-23 156.2 11.6 138 395-535 7-155 (159)
47 2vn1_A 70 kDa peptidylprolyl i 99.8 3.1E-18 1.1E-22 148.3 15.7 115 264-383 10-127 (129)
48 1yat_A FK506 binding protein; 99.8 3.7E-18 1.3E-22 144.3 15.2 108 269-381 5-112 (113)
49 2ppn_A FK506-binding protein 1 99.8 2.2E-18 7.7E-23 144.2 13.6 106 271-381 1-106 (107)
50 4dip_A Peptidyl-prolyl CIS-tra 99.8 3.5E-18 1.2E-22 147.2 13.2 114 267-384 9-124 (125)
51 2lgo_A FKBP; infectious diseas 99.8 4.2E-18 1.4E-22 147.2 13.4 105 151-260 20-130 (130)
52 4dt4_A FKBP-type 16 kDa peptid 99.8 5E-19 1.7E-23 158.1 7.6 132 52-192 24-158 (169)
53 2kr7_A FKBP-type peptidyl-prol 99.8 3.1E-18 1.1E-22 151.5 12.3 131 51-192 5-139 (151)
54 1jvw_A Macrophage infectivity 99.8 8.2E-18 2.8E-22 151.0 14.9 122 267-397 34-155 (167)
55 2d9f_A FK506-binding protein 8 99.8 3.2E-18 1.1E-22 149.1 11.7 122 262-391 9-131 (135)
56 3oe2_A Peptidyl-prolyl CIS-tra 99.8 3.7E-18 1.3E-22 158.9 12.8 105 149-261 113-218 (219)
57 2y78_A Peptidyl-prolyl CIS-tra 99.8 1.2E-17 4.1E-22 144.8 14.6 109 267-381 25-133 (133)
58 3prb_A FKBP-type peptidyl-prol 99.8 7.5E-19 2.6E-23 164.8 6.9 168 53-232 2-190 (231)
59 3pr9_A FKBP-type peptidyl-prol 99.7 7.8E-19 2.7E-23 155.5 6.2 129 53-193 2-144 (157)
60 1ihg_A Cyclophilin 40; ppiase 99.7 2.3E-17 7.9E-22 170.0 17.4 155 391-545 215-370 (370)
61 3uf8_A Ubiquitin-like protein 99.7 3.4E-17 1.2E-21 153.0 16.0 122 254-381 88-209 (209)
62 1ix5_A FKBP; ppiase, isomerase 99.7 6.1E-19 2.1E-23 156.1 3.3 123 53-192 2-144 (151)
63 1u79_A FKBP-type peptidyl-prol 99.7 9.5E-18 3.3E-22 145.1 10.1 110 150-260 9-128 (129)
64 2kfw_A FKBP-type peptidyl-prol 99.7 6.8E-18 2.3E-22 154.8 9.2 131 52-192 2-134 (196)
65 2k8i_A SLYD, peptidyl-prolyl C 99.7 2.1E-17 7.1E-22 148.7 12.0 125 52-193 2-135 (171)
66 1fd9_A Protein (macrophage inf 99.7 1.5E-16 5E-21 148.4 14.2 109 267-383 103-211 (213)
67 2pbc_A FK506-binding protein 2 99.7 7.8E-17 2.7E-21 133.5 10.2 91 167-262 4-98 (102)
68 1q6h_A FKBP-type peptidyl-prol 99.7 6.2E-16 2.1E-20 145.2 15.0 105 268-381 119-223 (224)
69 4gcn_A Protein STI-1; structur 99.7 4.8E-16 1.6E-20 134.4 11.9 115 395-525 4-125 (127)
70 3upv_A Heat shock protein STI1 99.7 6.8E-16 2.3E-20 132.7 12.6 116 398-528 3-124 (126)
71 3cgm_A SLYD, peptidyl-prolyl C 99.7 1.1E-16 3.7E-21 142.2 7.5 126 53-193 3-131 (158)
72 1hxv_A Trigger factor; FKBP fo 99.6 3.8E-16 1.3E-20 130.9 7.8 87 48-143 26-112 (113)
73 3sz7_A HSC70 cochaperone (SGT) 99.6 7.6E-15 2.6E-19 132.5 13.3 119 397-530 9-129 (164)
74 3gyz_A Chaperone protein IPGC; 99.6 9.4E-15 3.2E-19 130.3 13.5 105 397-516 34-138 (151)
75 2xcb_A PCRH, regulatory protei 99.6 2.8E-14 9.5E-19 125.6 13.1 121 398-533 17-137 (142)
76 2vgx_A Chaperone SYCD; alterna 99.6 2.1E-14 7.2E-19 127.6 12.4 119 397-530 19-137 (148)
77 4ga2_A E3 SUMO-protein ligase 99.5 3.9E-14 1.3E-18 126.1 12.0 115 397-526 29-144 (150)
78 3q49_B STIP1 homology and U bo 99.5 4.2E-14 1.4E-18 122.8 11.3 119 399-532 9-132 (137)
79 4ga2_A E3 SUMO-protein ligase 99.5 2.9E-14 9.9E-19 126.9 9.5 114 405-533 3-116 (150)
80 1a17_A Serine/threonine protei 99.5 1.1E-12 3.8E-17 117.3 17.6 123 392-529 6-128 (166)
81 3urz_A Uncharacterized protein 99.5 5.2E-13 1.8E-17 125.6 15.8 131 399-529 4-135 (208)
82 1elw_A TPR1-domain of HOP; HOP 99.5 5.3E-13 1.8E-17 111.7 12.6 114 398-526 3-116 (118)
83 1hxv_A Trigger factor; FKBP fo 99.5 1.9E-13 6.4E-18 114.5 9.0 82 167-260 28-112 (113)
84 4gyw_A UDP-N-acetylglucosamine 99.4 6.2E-13 2.1E-17 147.9 14.9 136 397-532 7-161 (723)
85 2xev_A YBGF; tetratricopeptide 99.4 1.2E-12 4.3E-17 112.1 13.4 116 400-527 3-121 (129)
86 2kr7_A FKBP-type peptidyl-prol 99.4 5.4E-13 1.8E-17 117.8 11.0 125 167-306 5-136 (151)
87 4dt4_A FKBP-type 16 kDa peptid 99.4 2.2E-13 7.6E-18 121.6 8.3 81 168-261 24-108 (169)
88 2vyi_A SGTA protein; chaperone 99.4 2E-12 6.7E-17 110.2 14.0 122 393-529 6-127 (131)
89 2dba_A Smooth muscle cell asso 99.4 9.7E-13 3.3E-17 115.3 12.3 116 399-526 28-143 (148)
90 1hxi_A PEX5, peroxisome target 99.4 3.5E-13 1.2E-17 115.2 9.1 101 401-516 19-119 (121)
91 3pr9_A FKBP-type peptidyl-prol 99.4 1.7E-13 5.9E-18 121.2 7.1 79 169-261 2-97 (157)
92 2lni_A Stress-induced-phosphop 99.4 1.1E-12 3.8E-17 112.5 11.7 115 398-527 15-129 (133)
93 1elr_A TPR2A-domain of HOP; HO 99.4 2E-12 6.9E-17 110.3 12.0 118 398-531 3-127 (131)
94 4gyw_A UDP-N-acetylglucosamine 99.4 1.7E-12 5.9E-17 144.4 13.1 100 401-515 79-178 (723)
95 4i17_A Hypothetical protein; T 99.4 4E-12 1.4E-16 120.8 13.9 104 400-518 8-112 (228)
96 1zu2_A Mitochondrial import re 99.4 6.9E-13 2.4E-17 117.1 7.7 102 411-527 14-136 (158)
97 2pl2_A Hypothetical conserved 99.4 1.9E-12 6.5E-17 122.6 11.3 118 402-535 42-170 (217)
98 2kfw_A FKBP-type peptidyl-prol 99.4 8.7E-13 3E-17 120.9 8.4 124 169-306 3-131 (196)
99 2c2l_A CHIP, carboxy terminus 99.4 2.9E-12 1E-16 126.6 12.5 102 399-515 4-105 (281)
100 3prb_A FKBP-type peptidyl-prol 99.3 9.1E-13 3.1E-17 123.5 7.4 67 169-236 2-85 (231)
101 2k8i_A SLYD, peptidyl-prolyl C 99.3 2.1E-12 7.2E-17 116.0 9.4 80 169-261 3-85 (171)
102 1ix5_A FKBP; ppiase, isomerase 99.3 2E-13 7E-18 120.6 2.7 80 169-261 2-98 (151)
103 2h6f_A Protein farnesyltransfe 99.3 3.7E-12 1.3E-16 131.4 11.3 79 450-528 168-246 (382)
104 3vtx_A MAMA; tetratricopeptide 99.3 1.5E-11 5.3E-16 112.4 13.6 145 399-544 5-168 (184)
105 3k9i_A BH0479 protein; putativ 99.3 2E-12 6.8E-17 109.5 7.0 97 411-522 2-101 (117)
106 2pl2_A Hypothetical conserved 99.3 1.3E-11 4.5E-16 116.7 13.4 89 446-535 116-204 (217)
107 1na0_A Designed protein CTPR3; 99.3 3.8E-11 1.3E-15 101.2 14.6 114 399-527 9-122 (125)
108 2h6f_A Protein farnesyltransfe 99.3 7.7E-12 2.6E-16 128.9 12.3 121 398-533 96-217 (382)
109 1wao_1 Serine/threonine protei 99.3 3.7E-12 1.3E-16 135.6 10.2 120 396-530 3-122 (477)
110 3cgm_A SLYD, peptidyl-prolyl C 99.3 4.3E-12 1.5E-16 112.5 7.5 78 169-261 3-80 (158)
111 1w26_A Trigger factor, TF; cha 99.3 5.7E-12 2E-16 131.0 8.3 99 51-157 156-254 (432)
112 3urz_A Uncharacterized protein 99.3 3.6E-11 1.2E-15 112.9 13.1 108 403-526 58-200 (208)
113 2e2e_A Formate-dependent nitri 99.3 5.4E-11 1.8E-15 108.2 13.4 113 399-526 44-159 (177)
114 3gyz_A Chaperone protein IPGC; 99.2 3.5E-12 1.2E-16 113.5 5.1 89 449-537 37-125 (151)
115 4i17_A Hypothetical protein; T 99.2 3.7E-11 1.3E-15 114.1 12.4 121 399-527 76-225 (228)
116 2kck_A TPR repeat; tetratricop 99.2 1.8E-11 6.1E-16 101.3 8.8 101 400-515 7-110 (112)
117 1hh8_A P67PHOX, NCF-2, neutrop 99.2 4.3E-11 1.5E-15 112.0 12.2 121 398-536 5-141 (213)
118 3vtx_A MAMA; tetratricopeptide 99.2 9.9E-11 3.4E-15 107.0 14.2 118 399-516 39-175 (184)
119 4gco_A Protein STI-1; structur 99.2 5.2E-11 1.8E-15 102.3 11.5 97 447-544 12-108 (126)
120 3ieg_A DNAJ homolog subfamily 99.2 2E-10 6.9E-15 115.7 16.4 122 400-532 235-356 (359)
121 3uq3_A Heat shock protein STI1 99.2 1.3E-10 4.4E-15 111.4 12.3 112 399-525 139-256 (258)
122 2yhc_A BAMD, UPF0169 lipoprote 99.2 3.5E-10 1.2E-14 107.4 14.9 111 399-521 4-135 (225)
123 3qky_A Outer membrane assembly 99.2 2.1E-10 7.2E-15 111.3 13.3 109 399-519 15-134 (261)
124 1xnf_A Lipoprotein NLPI; TPR, 99.2 5.3E-10 1.8E-14 108.5 15.9 114 397-525 41-154 (275)
125 2fo7_A Synthetic consensus TPR 99.1 3.7E-10 1.3E-14 96.1 12.5 119 401-534 3-121 (136)
126 3qky_A Outer membrane assembly 99.1 7.6E-10 2.6E-14 107.3 16.3 119 399-529 52-198 (261)
127 1t11_A Trigger factor, TF; hel 99.1 1.7E-11 5.7E-16 125.8 4.6 100 51-158 159-258 (392)
128 2vsy_A XCC0866; transferase, g 99.1 1.6E-10 5.5E-15 125.7 12.8 116 399-529 23-138 (568)
129 2vgx_A Chaperone SYCD; alterna 99.1 5.6E-11 1.9E-15 105.3 7.1 102 420-536 8-109 (148)
130 1hh8_A P67PHOX, NCF-2, neutrop 99.1 1.9E-10 6.6E-15 107.5 11.2 103 399-516 37-155 (213)
131 4abn_A Tetratricopeptide repea 99.1 2.1E-10 7E-15 122.1 12.6 122 400-536 171-312 (474)
132 3as5_A MAMA; tetratricopeptide 99.1 7.4E-10 2.5E-14 100.1 14.1 122 399-535 42-163 (186)
133 2l6j_A TPR repeat-containing p 99.1 1.8E-11 6.1E-16 101.6 2.9 93 399-506 4-102 (111)
134 2pzi_A Probable serine/threoni 99.1 5.2E-11 1.8E-15 132.5 7.3 126 399-525 433-577 (681)
135 3u4t_A TPR repeat-containing p 99.1 5.3E-10 1.8E-14 108.5 13.5 75 449-523 75-149 (272)
136 4abn_A Tetratricopeptide repea 99.1 3.3E-10 1.1E-14 120.4 12.8 115 399-529 102-226 (474)
137 3uq3_A Heat shock protein STI1 99.1 7.1E-10 2.4E-14 106.2 13.9 137 399-535 79-226 (258)
138 2pzi_A Probable serine/threoni 99.1 1.3E-10 4.3E-15 129.4 9.2 89 447-536 466-554 (681)
139 2kat_A Uncharacterized protein 99.1 6.1E-10 2.1E-14 93.4 10.9 96 417-527 3-100 (115)
140 3as5_A MAMA; tetratricopeptide 99.1 5.8E-10 2E-14 100.8 11.6 122 398-534 7-128 (186)
141 2y4t_A DNAJ homolog subfamily 99.1 2E-09 6.7E-14 112.7 17.2 121 400-531 258-378 (450)
142 3ieg_A DNAJ homolog subfamily 99.1 9.9E-10 3.4E-14 110.5 13.9 111 399-524 3-116 (359)
143 2q7f_A YRRB protein; TPR, prot 99.1 1.4E-09 4.8E-14 103.3 14.0 110 400-524 58-167 (243)
144 4gcn_A Protein STI-1; structur 99.1 5.2E-10 1.8E-14 96.1 9.9 69 448-516 8-76 (127)
145 1fch_A Peroxisomal targeting s 99.1 6.5E-10 2.2E-14 112.9 12.3 123 399-536 217-350 (368)
146 1hxi_A PEX5, peroxisome target 99.1 2E-09 6.9E-14 91.5 13.4 93 451-544 20-112 (121)
147 2e2e_A Formate-dependent nitri 99.1 6.7E-11 2.3E-15 107.5 4.4 129 401-545 12-143 (177)
148 3upv_A Heat shock protein STI1 99.1 1.7E-09 5.7E-14 92.2 12.8 89 448-536 4-92 (126)
149 1qqe_A Vesicular transport pro 99.1 1.6E-09 5.4E-14 107.3 14.4 112 397-517 75-193 (292)
150 3qou_A Protein YBBN; thioredox 99.0 9.7E-10 3.3E-14 108.7 12.5 121 399-534 117-273 (287)
151 2q7f_A YRRB protein; TPR, prot 99.0 1.2E-09 4.2E-14 103.7 12.6 130 399-544 91-220 (243)
152 4eqf_A PEX5-related protein; a 99.0 6.8E-10 2.3E-14 113.0 11.4 120 399-533 213-344 (365)
153 2gw1_A Mitochondrial precursor 99.0 1.9E-09 6.4E-14 114.6 15.3 106 395-516 2-107 (514)
154 3mkr_A Coatomer subunit epsilo 99.0 2.3E-09 7.7E-14 106.3 14.4 110 400-526 131-244 (291)
155 2xcb_A PCRH, regulatory protei 99.0 3.1E-10 1.1E-14 99.3 7.2 88 449-536 19-106 (142)
156 2l6j_A TPR repeat-containing p 99.0 2.3E-09 7.9E-14 88.6 12.1 67 449-515 5-71 (111)
157 2ho1_A Type 4 fimbrial biogene 99.0 2.3E-09 7.7E-14 102.8 13.6 80 450-529 143-222 (252)
158 4eqf_A PEX5-related protein; a 99.0 7.8E-10 2.7E-14 112.6 10.8 127 404-544 182-308 (365)
159 2vq2_A PILW, putative fimbrial 99.0 2.7E-09 9.2E-14 99.8 13.6 87 449-535 77-166 (225)
160 2vq2_A PILW, putative fimbrial 99.0 3.2E-09 1.1E-13 99.2 14.2 117 401-530 78-196 (225)
161 1na3_A Designed protein CTPR2; 99.0 3.6E-09 1.2E-13 84.0 12.4 80 448-527 9-88 (91)
162 3u4t_A TPR repeat-containing p 99.0 2.9E-09 9.7E-14 103.3 14.2 116 399-530 74-190 (272)
163 3fp2_A TPR repeat-containing p 99.0 1E-09 3.5E-14 117.5 12.0 116 387-518 13-128 (537)
164 2yhc_A BAMD, UPF0169 lipoprote 99.0 3.5E-09 1.2E-13 100.4 14.3 124 400-535 42-203 (225)
165 2y4t_A DNAJ homolog subfamily 99.0 3.7E-09 1.2E-13 110.6 15.7 112 397-523 24-138 (450)
166 1qqe_A Vesicular transport pro 99.0 1.8E-09 6E-14 107.0 12.5 112 398-518 116-235 (292)
167 2r5s_A Uncharacterized protein 99.0 1.8E-09 6.2E-14 98.1 11.3 70 465-534 91-162 (176)
168 2ho1_A Type 4 fimbrial biogene 99.0 1.8E-09 6E-14 103.6 11.5 137 399-535 37-194 (252)
169 2hr2_A Hypothetical protein; a 99.0 2.2E-09 7.5E-14 94.9 10.9 89 448-536 11-122 (159)
170 3sz7_A HSC70 cochaperone (SGT) 99.0 3.6E-09 1.2E-13 94.8 12.6 89 448-536 11-99 (164)
171 2fo7_A Synthetic consensus TPR 99.0 3.2E-09 1.1E-13 90.2 11.5 101 400-515 36-136 (136)
172 1fch_A Peroxisomal targeting s 99.0 6.2E-09 2.1E-13 105.6 15.6 145 399-544 132-312 (368)
173 3hym_B Cell division cycle pro 99.0 7.1E-09 2.4E-13 103.1 15.6 134 401-534 24-177 (330)
174 1w3b_A UDP-N-acetylglucosamine 99.0 3.2E-09 1.1E-13 109.1 13.4 144 400-544 170-332 (388)
175 3cv0_A Peroxisome targeting si 99.0 2.8E-09 9.6E-14 105.9 12.5 123 399-536 172-306 (327)
176 1w3b_A UDP-N-acetylglucosamine 99.0 2.6E-09 9.1E-14 109.7 12.7 129 401-545 239-367 (388)
177 3edt_B KLC 2, kinesin light ch 99.0 6.1E-09 2.1E-13 100.9 13.8 132 397-535 41-188 (283)
178 3hym_B Cell division cycle pro 98.9 4.9E-09 1.7E-13 104.3 13.1 131 400-546 91-222 (330)
179 3ma5_A Tetratricopeptide repea 98.9 5.1E-09 1.7E-13 85.7 10.4 67 449-515 8-74 (100)
180 3ro3_A PINS homolog, G-protein 98.9 1.2E-08 4.2E-13 89.5 13.5 109 396-513 6-120 (164)
181 3mkr_A Coatomer subunit epsilo 98.9 1E-08 3.5E-13 101.5 13.8 98 409-521 176-274 (291)
182 2kc7_A BFR218_protein; tetratr 98.9 9E-09 3.1E-13 83.5 10.5 69 451-519 3-72 (99)
183 3q49_B STIP1 homology and U bo 98.9 1.3E-08 4.5E-13 87.6 12.1 89 448-536 9-97 (137)
184 3u3w_A Transcriptional activat 98.9 1.1E-08 3.7E-13 101.2 12.9 107 398-512 154-267 (293)
185 1xnf_A Lipoprotein NLPI; TPR, 98.9 1E-08 3.5E-13 99.2 12.6 117 408-535 14-130 (275)
186 3ulq_A Response regulator aspa 98.9 2E-08 6.8E-13 103.1 15.3 127 397-531 141-279 (383)
187 1w26_A Trigger factor, TF; cha 98.9 4.2E-09 1.4E-13 109.4 9.5 85 167-262 156-242 (432)
188 2kc7_A BFR218_protein; tetratr 98.9 1.1E-09 3.7E-14 89.1 4.1 92 402-515 3-94 (99)
189 4g1t_A Interferon-induced prot 98.9 1E-08 3.6E-13 108.0 12.7 124 399-528 51-184 (472)
190 2gw1_A Mitochondrial precursor 98.9 2.1E-08 7.1E-13 106.5 14.9 118 401-527 374-494 (514)
191 3u3w_A Transcriptional activat 98.9 8.6E-09 2.9E-13 101.9 11.1 123 399-530 115-250 (293)
192 2vsy_A XCC0866; transferase, g 98.8 5.7E-09 1.9E-13 113.4 10.3 110 412-536 2-111 (568)
193 3cv0_A Peroxisome targeting si 98.8 4.5E-08 1.5E-12 97.0 16.1 137 399-535 89-259 (327)
194 1na3_A Designed protein CTPR2; 98.8 1.2E-08 4.2E-13 80.8 9.3 84 398-496 8-91 (91)
195 2kck_A TPR repeat; tetratricop 98.8 1.2E-08 4.1E-13 83.8 9.5 86 450-535 8-96 (112)
196 3rkv_A Putative peptidylprolyl 98.8 1.3E-08 4.3E-13 91.0 10.2 89 448-536 11-117 (162)
197 2ifu_A Gamma-SNAP; membrane fu 98.8 1.9E-08 6.4E-13 100.3 12.5 108 398-516 115-228 (307)
198 2ifu_A Gamma-SNAP; membrane fu 98.8 1.4E-08 4.7E-13 101.3 11.5 109 397-515 74-188 (307)
199 3n71_A Histone lysine methyltr 98.8 5.2E-08 1.8E-12 103.2 16.2 143 393-543 303-461 (490)
200 1pc2_A Mitochondria fission pr 98.8 1.3E-08 4.3E-13 88.9 9.4 100 415-529 14-118 (152)
201 3fp2_A TPR repeat-containing p 98.8 1.3E-08 4.5E-13 108.9 11.6 142 395-536 239-398 (537)
202 2qfc_A PLCR protein; TPR, HTH, 98.8 4.6E-08 1.6E-12 96.6 14.4 126 401-535 117-255 (293)
203 3q15_A PSP28, response regulat 98.8 4.3E-08 1.5E-12 100.5 14.6 109 397-514 180-293 (378)
204 3ulq_A Response regulator aspa 98.8 3.3E-08 1.1E-12 101.5 13.7 109 396-513 181-295 (383)
205 3q15_A PSP28, response regulat 98.8 5.2E-08 1.8E-12 99.9 15.0 141 396-545 138-289 (378)
206 1elw_A TPR1-domain of HOP; HOP 98.8 5.7E-08 1.9E-12 80.4 12.1 89 448-536 4-92 (118)
207 2qfc_A PLCR protein; TPR, HTH, 98.8 3.5E-08 1.2E-12 97.5 12.2 107 398-512 154-267 (293)
208 2lni_A Stress-induced-phosphop 98.8 4.6E-08 1.6E-12 83.1 11.4 89 448-536 16-104 (133)
209 3edt_B KLC 2, kinesin light ch 98.8 3.9E-08 1.3E-12 95.1 12.3 109 396-511 82-198 (283)
210 2xpi_A Anaphase-promoting comp 98.8 7.6E-08 2.6E-12 104.5 16.0 116 402-525 478-593 (597)
211 2xev_A YBGF; tetratricopeptide 98.8 4.4E-08 1.5E-12 83.2 11.0 95 450-545 4-104 (129)
212 3ro3_A PINS homolog, G-protein 98.8 6E-08 2.1E-12 85.0 12.2 109 398-515 48-162 (164)
213 4a1s_A PINS, partner of inscut 98.7 4.7E-08 1.6E-12 100.9 12.7 125 396-531 45-181 (411)
214 3nf1_A KLC 1, kinesin light ch 98.7 6.3E-08 2.2E-12 95.2 13.1 132 397-535 67-214 (311)
215 3gw4_A Uncharacterized protein 98.7 6.3E-08 2.1E-12 89.1 11.4 106 398-512 25-137 (203)
216 2xpi_A Anaphase-promoting comp 98.7 8E-08 2.7E-12 104.3 14.1 131 399-545 373-503 (597)
217 3nf1_A KLC 1, kinesin light ch 98.7 1.3E-07 4.4E-12 93.0 13.5 109 397-512 109-225 (311)
218 3sf4_A G-protein-signaling mod 98.7 1.2E-07 4E-12 97.2 13.6 109 398-515 186-300 (406)
219 2dba_A Smooth muscle cell asso 98.7 1.6E-07 5.6E-12 81.3 12.4 88 449-536 29-119 (148)
220 2vyi_A SGTA protein; chaperone 98.7 2.3E-07 8E-12 78.1 12.8 90 447-536 11-100 (131)
221 3ro2_A PINS homolog, G-protein 98.7 1E-07 3.5E-12 94.3 12.2 106 399-515 5-116 (338)
222 1a17_A Serine/threonine protei 98.7 1.8E-07 6.3E-12 82.8 12.6 89 447-535 12-100 (166)
223 2fbn_A 70 kDa peptidylprolyl i 98.7 2.7E-07 9.1E-12 85.2 13.5 89 447-535 37-141 (198)
224 3ro2_A PINS homolog, G-protein 98.6 1.8E-07 6E-12 92.6 12.9 137 398-544 182-330 (338)
225 3sf4_A G-protein-signaling mod 98.6 1E-07 3.4E-12 97.7 11.1 122 399-531 9-142 (406)
226 1ouv_A Conserved hypothetical 98.6 3.2E-07 1.1E-11 89.1 13.9 73 450-526 76-156 (273)
227 2c2l_A CHIP, carboxy terminus 98.6 1.4E-07 4.9E-12 92.6 11.3 88 449-536 5-92 (281)
228 1na0_A Designed protein CTPR3; 98.6 3.6E-07 1.2E-11 76.2 12.3 96 448-544 9-104 (125)
229 3qww_A SET and MYND domain-con 98.6 4.6E-07 1.6E-11 94.4 15.5 124 395-525 294-430 (433)
230 1t11_A Trigger factor, TF; hel 98.6 1.7E-08 5.8E-13 103.4 4.6 85 167-262 159-245 (392)
231 4f3v_A ESX-1 secretion system 98.6 2.6E-07 8.8E-12 89.9 12.6 109 401-523 137-248 (282)
232 2ond_A Cleavage stimulation fa 98.6 2E-07 6.7E-12 92.8 12.1 86 461-547 182-271 (308)
233 4a1s_A PINS, partner of inscut 98.6 1.3E-07 4.3E-12 97.6 10.9 107 399-514 223-335 (411)
234 1elr_A TPR2A-domain of HOP; HO 98.6 1.7E-07 5.9E-12 79.0 9.9 88 448-535 4-98 (131)
235 2v5f_A Prolyl 4-hydroxylase su 98.6 2.7E-07 9.1E-12 76.0 10.5 79 451-529 8-93 (104)
236 2ond_A Cleavage stimulation fa 98.6 3.5E-07 1.2E-11 91.0 12.4 103 401-518 52-170 (308)
237 1wao_1 Serine/threonine protei 98.6 1.8E-08 6.1E-13 107.0 3.1 102 399-515 40-154 (477)
238 4g1t_A Interferon-induced prot 98.6 1.6E-07 5.6E-12 98.7 10.5 120 399-525 94-218 (472)
239 1dce_A Protein (RAB geranylger 98.6 4.7E-07 1.6E-11 98.0 13.9 116 399-529 63-191 (567)
240 3qwp_A SET and MYND domain-con 98.5 1.2E-06 4.1E-11 91.3 16.1 124 398-528 286-422 (429)
241 1dce_A Protein (RAB geranylger 98.5 5.3E-07 1.8E-11 97.6 12.7 123 393-530 22-157 (567)
242 2v5f_A Prolyl 4-hydroxylase su 98.5 4.9E-07 1.7E-11 74.4 9.5 83 399-489 5-87 (104)
243 1ouv_A Conserved hypothetical 98.5 1.5E-06 5E-11 84.3 14.5 76 449-528 111-194 (273)
244 3k9i_A BH0479 protein; putativ 98.5 1.2E-07 4E-12 79.7 5.7 77 460-536 2-81 (117)
245 3gw4_A Uncharacterized protein 98.5 1.3E-06 4.4E-11 80.1 13.3 110 397-514 64-179 (203)
246 1ihg_A Cyclophilin 40; ppiase 98.5 3.6E-07 1.2E-11 93.5 10.3 87 450-536 225-327 (370)
247 1zu2_A Mitochondrial import re 98.5 4.3E-07 1.5E-11 80.0 9.2 71 460-530 14-94 (158)
248 3rjv_A Putative SEL1 repeat pr 98.5 7E-07 2.4E-11 83.6 11.1 128 399-527 18-173 (212)
249 3bee_A Putative YFRE protein; 98.5 1.1E-06 3.7E-11 70.7 10.2 69 449-517 7-78 (93)
250 2r5s_A Uncharacterized protein 98.5 4.2E-07 1.5E-11 82.2 8.7 114 396-510 37-172 (176)
251 3dra_A Protein farnesyltransfe 98.4 1.7E-06 6E-11 85.7 13.7 112 399-525 67-189 (306)
252 3rjv_A Putative SEL1 repeat pr 98.4 5.6E-07 1.9E-11 84.3 9.4 109 407-528 19-137 (212)
253 3q7a_A Farnesyltransferase alp 98.4 3.1E-06 1.1E-10 84.9 13.9 121 411-546 66-196 (349)
254 3dra_A Protein farnesyltransfe 98.4 1E-06 3.5E-11 87.4 9.9 116 401-531 105-235 (306)
255 1hz4_A MALT regulatory protein 98.4 4.8E-06 1.6E-10 84.6 14.9 108 398-514 52-167 (373)
256 3dss_A Geranylgeranyl transfer 98.3 2.6E-06 8.7E-11 85.1 12.0 109 404-527 34-155 (331)
257 3dss_A Geranylgeranyl transfer 98.3 1E-05 3.4E-10 80.8 15.8 100 415-529 90-192 (331)
258 1nzn_A CGI-135 protein, fissio 98.3 2.9E-06 1E-10 71.2 10.0 102 414-530 16-122 (126)
259 3ma5_A Tetratricopeptide repea 98.3 1.2E-06 4.1E-11 71.2 7.2 81 399-494 7-89 (100)
260 1klx_A Cysteine rich protein B 98.3 4.3E-06 1.5E-10 72.5 10.9 97 405-522 31-135 (138)
261 3qou_A Protein YBBN; thioredox 98.2 1.5E-06 5.2E-11 85.5 7.8 112 399-510 151-283 (287)
262 2kat_A Uncharacterized protein 98.2 6.6E-06 2.3E-10 68.3 10.3 70 466-535 3-72 (115)
263 4f3v_A ESX-1 secretion system 98.2 3E-06 1E-10 82.3 8.1 126 403-545 106-236 (282)
264 3q7a_A Farnesyltransferase alp 98.2 5.8E-06 2E-10 82.9 10.4 114 400-528 89-213 (349)
265 2xm6_A Protein corresponding t 98.1 2.2E-05 7.4E-10 83.3 13.0 77 448-526 363-450 (490)
266 3o48_A Mitochondria fission 1 98.1 2.8E-05 9.7E-10 65.3 10.6 82 449-530 41-126 (134)
267 1y8m_A FIS1; mitochondria, unk 98.0 5.2E-05 1.8E-09 64.5 11.8 81 449-529 40-124 (144)
268 1hz4_A MALT regulatory protein 98.0 3.1E-05 1.1E-09 78.5 12.6 107 396-512 11-123 (373)
269 3n71_A Histone lysine methyltr 98.0 1.5E-05 5E-10 84.4 10.3 113 396-515 348-468 (490)
270 2ooe_A Cleavage stimulation fa 98.0 1.7E-05 5.9E-10 84.9 11.0 101 400-515 273-389 (530)
271 1xi4_A Clathrin heavy chain; a 98.0 3.7E-05 1.3E-09 88.6 13.4 110 401-533 1197-1331(1630)
272 2ooe_A Cleavage stimulation fa 98.0 4.8E-05 1.6E-09 81.5 13.6 112 416-543 255-382 (530)
273 3gty_X Trigger factor, TF; cha 98.0 7.6E-06 2.6E-10 84.9 6.6 87 52-158 154-240 (433)
274 1b89_A Protein (clathrin heavy 97.9 3.2E-05 1.1E-09 79.7 10.1 113 398-534 147-259 (449)
275 3ffl_A Anaphase-promoting comp 97.9 0.00017 5.8E-09 63.2 12.5 118 401-525 22-164 (167)
276 1klx_A Cysteine rich protein B 97.9 9.7E-05 3.3E-09 63.8 10.9 93 413-528 9-105 (138)
277 2xm6_A Protein corresponding t 97.8 0.0002 6.8E-09 75.8 14.5 93 400-511 76-180 (490)
278 3e4b_A ALGK; tetratricopeptide 97.7 9.2E-05 3.1E-09 77.7 10.5 120 401-526 178-328 (452)
279 1pc2_A Mitochondria fission pr 97.7 0.00022 7.4E-09 62.1 10.9 79 399-491 32-114 (152)
280 3ly7_A Transcriptional activat 97.7 0.00034 1.2E-08 70.1 13.5 114 402-516 199-344 (372)
281 4b4t_Q 26S proteasome regulato 97.7 0.00015 5.2E-09 74.8 11.3 120 395-514 51-207 (434)
282 3u64_A Protein TP_0956; tetrat 97.7 0.00019 6.6E-09 69.1 10.6 88 415-515 179-273 (301)
283 3e4b_A ALGK; tetratricopeptide 97.6 0.00022 7.6E-09 74.8 11.7 74 448-527 283-365 (452)
284 4b4t_Q 26S proteasome regulato 97.6 0.00013 4.6E-09 75.3 9.5 100 402-510 138-237 (434)
285 3mv2_B Coatomer subunit epsilo 97.4 0.00027 9.3E-09 69.5 8.4 101 404-522 181-293 (310)
286 1xi4_A Clathrin heavy chain; a 97.4 0.00065 2.2E-08 78.5 12.1 107 404-515 1054-1167(1630)
287 2ff4_A Probable regulatory pro 97.2 0.0042 1.4E-07 63.5 14.9 126 399-525 115-254 (388)
288 3mv2_B Coatomer subunit epsilo 97.2 0.00093 3.2E-08 65.6 9.0 122 402-537 103-232 (310)
289 3bee_A Putative YFRE protein; 97.1 0.00079 2.7E-08 53.6 6.3 68 399-481 6-76 (93)
290 3qwp_A SET and MYND domain-con 97.0 0.0016 5.6E-08 67.5 9.3 94 395-495 325-426 (429)
291 3qww_A SET and MYND domain-con 96.9 0.0028 9.6E-08 65.7 9.6 81 396-483 337-422 (433)
292 1nzn_A CGI-135 protein, fissio 96.6 0.014 4.8E-07 48.8 10.1 45 446-490 72-116 (126)
293 1b89_A Protein (clathrin heavy 96.6 0.0056 1.9E-07 63.0 9.2 116 400-534 178-300 (449)
294 3gty_X Trigger factor, TF; cha 96.5 0.0052 1.8E-07 63.5 7.9 72 168-262 154-227 (433)
295 3o48_A Mitochondria fission 1 96.4 0.029 9.9E-07 47.1 10.7 45 447-491 77-121 (134)
296 1y8m_A FIS1; mitochondria, unk 96.4 0.043 1.5E-06 46.6 11.8 74 403-490 43-119 (144)
297 3ffl_A Anaphase-promoting comp 96.1 0.027 9.2E-07 49.3 9.0 94 398-492 62-165 (167)
298 3u64_A Protein TP_0956; tetrat 95.9 0.013 4.3E-07 56.5 7.0 63 463-525 178-248 (301)
299 4e6h_A MRNA 3'-END-processing 95.8 0.17 5.9E-06 55.4 16.3 123 403-525 382-513 (679)
300 4e6h_A MRNA 3'-END-processing 95.5 0.06 2E-06 59.0 11.3 99 402-514 437-536 (679)
301 4h7y_A Dual specificity protei 95.1 0.46 1.6E-05 40.7 12.7 94 416-517 36-129 (161)
302 3mv2_A Coatomer subunit alpha; 95.0 0.14 4.8E-06 49.7 10.6 117 401-517 116-242 (325)
303 3mkr_B Coatomer subunit alpha; 94.8 0.25 8.6E-06 47.9 11.9 114 402-515 105-231 (320)
304 4gns_B Protein CSD3, chitin bi 94.6 0.22 7.4E-06 54.8 12.4 59 450-508 339-397 (754)
305 3kae_A CDC27, possible protein 94.1 0.29 1E-05 42.6 9.4 95 405-519 39-151 (242)
306 3txn_A 26S proteasome regulato 94.1 0.46 1.6E-05 48.1 12.6 99 404-511 104-210 (394)
307 4b4t_R RPN7, 26S proteasome re 93.8 0.21 7E-06 51.6 9.8 101 401-513 133-239 (429)
308 1zbp_A Hypothetical protein VP 93.5 0.5 1.7E-05 44.7 10.8 70 456-525 5-74 (273)
309 3ly7_A Transcriptional activat 93.5 0.21 7E-06 50.0 8.6 65 403-483 281-345 (372)
310 1ya0_A SMG-7 transcript varian 92.9 0.69 2.4E-05 48.4 12.0 82 446-527 150-231 (497)
311 2uy1_A Cleavage stimulation fa 92.7 1.3 4.4E-05 46.4 14.0 117 401-519 215-357 (493)
312 3txn_A 26S proteasome regulato 92.0 1.1 3.7E-05 45.4 11.6 132 400-531 20-191 (394)
313 2v6y_A AAA family ATPase, P60 90.4 0.56 1.9E-05 35.9 5.9 40 391-430 2-42 (83)
314 1zbp_A Hypothetical protein VP 89.6 1.3 4.4E-05 41.9 8.9 63 406-483 4-66 (273)
315 4b4t_P 26S proteasome regulato 89.5 4.4 0.00015 41.7 13.9 105 398-511 136-247 (445)
316 2uy1_A Cleavage stimulation fa 88.6 3.1 0.00011 43.5 12.2 60 464-524 195-254 (493)
317 2cpt_A SKD1 protein, vacuolar 88.5 1.3 4.4E-05 36.4 7.1 45 387-431 5-50 (117)
318 4gns_B Protein CSD3, chitin bi 88.1 0.5 1.7E-05 51.9 5.8 60 400-474 338-397 (754)
319 2w2u_A Hypothetical P60 katani 86.0 1.1 3.9E-05 34.2 5.0 38 393-430 13-50 (83)
320 2v6x_A Vacuolar protein sortin 84.5 2.2 7.5E-05 32.7 6.1 42 390-431 4-45 (85)
321 4b4t_S RPN3, 26S proteasome re 84.3 1.6 5.4E-05 45.5 6.7 69 447-515 230-303 (523)
322 3mkq_B Coatomer subunit alpha; 83.4 3.8 0.00013 36.1 8.0 81 400-508 35-115 (177)
323 4g26_A Pentatricopeptide repea 83.4 13 0.00045 38.7 13.7 101 402-516 108-211 (501)
324 1wfd_A Hypothetical protein 15 82.9 4.3 0.00015 31.6 7.3 37 395-431 11-47 (93)
325 4a5x_A MITD1, MIT domain-conta 81.4 5.2 0.00018 30.7 7.1 35 397-431 14-48 (86)
326 4fhn_B Nucleoporin NUP120; pro 80.6 4.2 0.00014 47.4 9.3 106 403-508 846-964 (1139)
327 4g26_A Pentatricopeptide repea 80.4 22 0.00074 37.1 14.0 75 449-523 106-183 (501)
328 1ya0_A SMG-7 transcript varian 79.2 5.9 0.0002 41.3 9.0 80 400-494 153-232 (497)
329 2dl1_A Spartin; SPG20, MIT, st 79.0 10 0.00035 30.6 8.3 73 394-466 17-96 (116)
330 2ff4_A Probable regulatory pro 77.9 13 0.00044 37.3 11.0 75 453-527 120-216 (388)
331 3mkq_A Coatomer beta'-subunit; 77.9 6.4 0.00022 43.3 9.5 24 451-474 684-707 (814)
332 4b4t_R RPN7, 26S proteasome re 77.8 3.4 0.00012 42.3 6.7 76 450-525 133-213 (429)
333 4b4t_P 26S proteasome regulato 74.2 25 0.00086 35.9 12.1 85 447-531 136-229 (445)
334 2crb_A Nuclear receptor bindin 74.1 5.5 0.00019 30.6 5.1 37 395-431 11-47 (97)
335 3t5v_B Nuclear mRNA export pro 74.1 7 0.00024 40.1 7.7 103 413-515 140-254 (455)
336 3mkq_B Coatomer subunit alpha; 73.8 8 0.00027 34.1 7.0 46 459-509 16-61 (177)
337 1wy6_A Hypothetical protein ST 73.4 16 0.00054 30.7 8.1 61 451-511 93-154 (172)
338 4a5x_A MITD1, MIT domain-conta 69.4 34 0.0012 26.0 8.8 11 505-515 46-56 (86)
339 2crb_A Nuclear receptor bindin 69.2 7.2 0.00025 29.9 4.7 28 482-509 15-42 (97)
340 2vkj_A TM1634; membrane protei 68.4 23 0.00078 26.9 7.2 32 397-428 51-82 (106)
341 3mkq_A Coatomer beta'-subunit; 68.4 13 0.00045 40.8 9.1 49 454-507 700-761 (814)
342 3lpz_A GET4 (YOR164C homolog); 68.0 90 0.0031 30.4 13.7 110 393-505 29-159 (336)
343 4h7y_A Dual specificity protei 65.0 21 0.00072 30.5 7.4 72 410-497 71-142 (161)
344 2w2u_A Hypothetical P60 katani 63.9 33 0.0011 25.9 7.7 15 501-515 45-59 (83)
345 2v6y_A AAA family ATPase, P60 63.7 36 0.0012 25.6 8.0 17 500-516 36-52 (83)
346 2wb7_A PT26-6P; extra chromoso 62.5 21 0.00072 36.4 8.1 16 416-431 449-464 (526)
347 1wfd_A Hypothetical protein 15 61.3 46 0.0016 25.7 8.3 16 501-516 41-56 (93)
348 2yin_A DOCK2, dedicator of cyt 61.1 11 0.00039 38.4 6.1 98 401-498 37-142 (436)
349 3kae_A CDC27, possible protein 59.2 91 0.0031 27.2 14.0 53 452-509 37-89 (242)
350 3ax2_A Mitochondrial import re 58.0 15 0.0005 27.1 4.5 39 393-431 11-49 (73)
351 3t5x_A PCI domain-containing p 57.5 20 0.00069 32.3 6.5 39 446-484 12-50 (203)
352 3eab_A Spastin; spastin, MIT, 56.9 56 0.0019 24.9 7.8 67 395-461 12-85 (89)
353 3spa_A Mtrpol, DNA-directed RN 56.5 1.1E+02 0.0037 34.9 13.2 104 401-515 129-236 (1134)
354 1qsa_A Protein (soluble lytic 55.8 16 0.00056 39.1 6.5 57 454-510 291-347 (618)
355 2wpv_A GET4, UPF0363 protein Y 54.7 1.5E+02 0.0052 28.4 13.5 100 396-506 30-158 (312)
356 1om2_A Protein (mitochondrial 53.9 26 0.00088 27.2 5.5 41 391-431 12-52 (95)
357 3ax2_A Mitochondrial import re 51.9 39 0.0013 24.8 6.0 36 487-522 22-57 (73)
358 2v6x_A Vacuolar protein sortin 49.7 79 0.0027 23.7 8.3 10 505-514 43-52 (85)
359 2dl1_A Spartin; SPG20, MIT, st 49.2 24 0.00083 28.4 4.9 44 463-514 18-61 (116)
360 2cpt_A SKD1 protein, vacuolar 48.4 1.1E+02 0.0036 24.7 10.1 21 500-520 43-63 (117)
361 2ijq_A Hypothetical protein; s 47.1 78 0.0027 27.2 8.2 69 401-476 34-103 (161)
362 4gq2_M Nucleoporin NUP120; bet 46.9 59 0.002 36.8 9.6 74 403-476 844-925 (950)
363 4gq2_M Nucleoporin NUP120; bet 45.6 27 0.00092 39.6 6.5 51 455-509 817-867 (950)
364 2cfu_A SDSA1; SDS-hydrolase, l 44.5 26 0.0009 37.8 6.0 49 450-498 451-499 (658)
365 3spa_A Mtrpol, DNA-directed RN 43.9 1.8E+02 0.0062 33.1 12.4 75 449-523 128-208 (1134)
366 2npm_A 14-3-3 domain containin 43.5 60 0.0021 30.3 7.4 53 416-476 173-226 (260)
367 2br9_A 14-3-3E, 14-3-3 protein 43.4 56 0.0019 30.1 7.1 54 416-476 147-201 (234)
368 2cfu_A SDSA1; SDS-hydrolase, l 42.7 56 0.0019 35.2 8.2 51 482-532 449-499 (658)
369 3t5x_A PCI domain-containing p 42.5 51 0.0017 29.5 6.7 34 482-515 14-47 (203)
370 3uzd_A 14-3-3 protein gamma; s 40.9 64 0.0022 29.9 7.1 54 416-476 148-202 (248)
371 3ubw_A 14-3-3E, 14-3-3 protein 40.7 65 0.0022 30.1 7.1 54 416-476 173-227 (261)
372 4b4t_S RPN3, 26S proteasome re 40.3 1.5E+02 0.0052 30.7 10.5 105 397-516 268-378 (523)
373 2vkj_A TM1634; membrane protei 40.0 1.2E+02 0.0041 23.0 7.2 31 482-512 53-83 (106)
374 1o9d_A 14-3-3-like protein C; 39.8 67 0.0023 30.0 7.1 53 416-475 152-205 (260)
375 2ijq_A Hypothetical protein; s 38.2 1.4E+02 0.0049 25.5 8.4 59 453-511 37-104 (161)
376 4fhn_B Nucleoporin NUP120; pro 37.9 29 0.00098 40.3 5.3 52 454-509 818-869 (1139)
377 3pmr_A Amyloid-like protein 1; 35.8 2.1E+02 0.0073 25.7 9.4 71 444-515 89-161 (219)
378 2ymb_A MITD1, MIT domain-conta 35.1 8 0.00027 36.2 0.0 39 394-432 18-56 (257)
379 3iqu_A 14-3-3 protein sigma; s 35.0 88 0.003 28.7 6.9 55 415-476 149-204 (236)
380 2o8p_A 14-3-3 domain containin 32.9 90 0.0031 28.4 6.6 71 399-476 120-196 (227)
381 2cwy_A Hypothetical protein TT 31.8 1.7E+02 0.0057 22.5 7.2 63 403-476 5-67 (94)
382 1om2_A Protein (mitochondrial 31.0 60 0.0021 25.1 4.3 35 487-521 25-59 (95)
383 2rpa_A Katanin P60 ATPase-cont 30.8 35 0.0012 25.4 2.9 26 451-476 15-40 (78)
384 2g0u_A Type III secretion syst 30.4 1.4E+02 0.0046 22.9 6.1 33 497-529 31-63 (92)
385 2oo2_A Hypothetical protein AF 30.3 1.1E+02 0.0037 23.2 5.6 39 392-430 28-66 (86)
386 3efz_A 14-3-3 protein; 14-3-3, 30.0 84 0.0029 29.4 6.0 55 416-477 169-226 (268)
387 2pmr_A Uncharacterized protein 28.9 1.2E+02 0.004 23.1 5.6 38 392-429 32-69 (87)
388 3umh_A Amyloid beta A4 protein 26.7 3.4E+02 0.012 24.2 11.1 71 444-515 82-154 (211)
389 2ca5_A MXIH; transport protein 26.6 2E+02 0.007 21.5 6.3 29 497-525 25-53 (85)
390 3k66_A Beta-amyloid-like prote 26.1 3.7E+02 0.013 24.4 11.0 72 443-515 83-158 (239)
391 3myv_A SUSD superfamily protei 25.4 1.3E+02 0.0043 30.6 7.1 47 464-510 164-218 (454)
392 2rkl_A Vacuolar protein sortin 25.4 1.2E+02 0.004 20.7 4.4 40 391-430 12-51 (53)
393 2wm9_A Dedicator of cytokinesi 24.7 55 0.0019 33.2 4.1 101 401-502 13-141 (428)
394 3htx_A HEN1; HEN1, small RNA m 24.5 83 0.0029 34.9 5.6 66 284-349 559-650 (950)
395 3myv_A SUSD superfamily protei 23.4 95 0.0033 31.6 5.7 29 448-476 190-218 (454)
396 3mcx_A SUSD superfamily protei 22.9 1.5E+02 0.0053 30.1 7.3 49 464-512 176-232 (477)
397 3lew_A SUSD-like carbohydrate 22.7 1.5E+02 0.005 30.6 7.1 48 464-511 174-232 (495)
398 3kez_A Putative sugar binding 22.6 1.4E+02 0.0048 30.3 6.9 47 464-510 170-224 (461)
399 2yhe_A SEC-alkyl sulfatase; hy 27.6 19 0.00065 39.0 0.0 52 450-501 463-514 (668)
400 3kez_A Putative sugar binding 21.2 1.1E+02 0.0036 31.3 5.6 29 448-476 196-224 (461)
401 2zan_A Vacuolar protein sortin 21.2 20 0.00069 36.6 0.0 38 394-431 6-43 (444)
No 1
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=6.2e-66 Score=527.88 Aligned_cols=355 Identities=81% Similarity=1.270 Sum_probs=222.3
Q ss_pred cCCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccC
Q 008251 27 KVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKG 106 (572)
Q Consensus 27 ~~~~~~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~G 106 (572)
+++++.+++++|++|+++++|+|+..|+.||.|.|||++++.||++|++|+..++|+.|.+|.+++++||+++|.+|++|
T Consensus 1 ~~~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~G 80 (356)
T 3jxv_A 1 KVGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKG 80 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCC
Confidence 46788889999999999999999778999999999999999999999999987789999999999999999999999999
Q ss_pred cEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEeEeeeccccccccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCC
Q 008251 107 ENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDG 186 (572)
Q Consensus 107 e~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g 186 (572)
++++|+|||++|||+.+.++.||++++|+|+|+|+++..+.++..++.+.++++.+|.|+.+|..++.|++||++++.||
T Consensus 81 e~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dg 160 (356)
T 3jxv_A 81 ENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDG 160 (356)
T ss_dssp -------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS
T ss_pred CEEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCC
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeeccceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecccceeee
Q 008251 187 MVVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEI 266 (572)
Q Consensus 187 ~~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~ 266 (572)
++|+++.++.|.+|.+++++||+++|.+|+.||+++|.|||+++||+.|.+.......|||+++|+|+|+|++|..+.++
T Consensus 161 t~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv 240 (356)
T 3jxv_A 161 TVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEI 240 (356)
T ss_dssp CEEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEE
T ss_pred CEEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999998766666789999999999999999999999
Q ss_pred eCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEE
Q 008251 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (572)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v 346 (572)
+.|.+++++++++|.|..+|..|+.|+|||.+++.||++|+++.. ....|+.|.+|.+.+|+||+.+|.+|++||++.|
T Consensus 241 ~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~-~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v 319 (356)
T 3jxv_A 241 GDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGH-DEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALV 319 (356)
T ss_dssp STTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESC-TTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEE
T ss_pred ccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccc-cCCcCEEEEECCCccchHHHHHHhCCCCCCEEEE
Confidence 999999999999999988999999999999999999999998753 4578999999999999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCcEEEEEEEEEeee
Q 008251 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (572)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~ 383 (572)
.|+|.++||..+... ...||++++++|+|+|+++.+
T Consensus 320 ~ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 320 TIPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EEChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 999999999876532 256899999999999999864
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=2.6e-56 Score=475.59 Aligned_cols=387 Identities=36% Similarity=0.629 Sum_probs=335.6
Q ss_pred cccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEeCCCCCcchHHHHHhhccCCcEEEEEec
Q 008251 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK 226 (572)
Q Consensus 151 ~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp 226 (572)
.++++.++++.+|.|...+..||.|+|||++++.+|++|+++ .|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 678999999999999777999999999999999999999986 6999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecccceeeeeCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEE
Q 008251 227 PQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVF 306 (572)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~ 306 (572)
|+++||+.|.+ +.|||+++|+|+|+|++|.. .++..|++++++++++|.|..+|..|++|+|||.+++ +|++|
T Consensus 109 ~~~~yg~~g~~-----~~i~~~~~l~~~v~l~~~~~-~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f 181 (457)
T 1kt0_A 109 PEYAYGSAGSL-----PKIPSNATLFFEIELLDFKG-EDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMF 181 (457)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-EETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEE
T ss_pred hHHhccccCCC-----CCCCCCCcEEEEEeeceeec-ccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEE
Confidence 99999998874 57999999999999999987 4778899999999999999889999999999999999 89999
Q ss_pred EecCCCCCcccEEEEcCCc---chhhHHHHHHhccCCCcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEeee
Q 008251 307 VKKGHSEEEQLFEFKTDEE---QVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (572)
Q Consensus 307 ~~~~~~~~~~~~~~~lg~~---~vi~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~ 383 (572)
+++ +++|.+|++ .++++|+.|+..|+.||++.+.++|.++|+..+... ..+|+++.+.|.+.+.++.+
T Consensus 182 ~~~-------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~--~~ip~~~~l~y~~~l~~~~~ 252 (457)
T 1kt0_A 182 DCR-------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPK--FGIEPNAELIYEVTLKSFEK 252 (457)
T ss_dssp EEE-------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGG--GTBCTTCCEEEEEEEEEEEC
T ss_pred ecC-------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcc--cCCCCCCEEEEEhhhhhccc
Confidence 863 489999987 489999999999999999999999999999987653 46899999999999999999
Q ss_pred cccccCCChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCC
Q 008251 384 EKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD 463 (572)
Q Consensus 384 ~~~~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~ 463 (572)
....|.+..+.+...+..++.+|+.+++.|+|..|+..|.+|+++.+.......++......+...+|+|+|.||+++++
T Consensus 253 A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~ 332 (457)
T 1kt0_A 253 AKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLRE 332 (457)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999887777788888889999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008251 464 YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNM 543 (572)
Q Consensus 464 ~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 543 (572)
|++|+.+|++||+++|+++++||++|.+|..+++|++|+.+|++|++++|++..+...+..+...+.+.+++++.+|++|
T Consensus 333 ~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 333 YTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANM 412 (457)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCC
Q 008251 544 FAKMSMFGSA 553 (572)
Q Consensus 544 f~~~~~~~~~ 553 (572)
|.++.+....
T Consensus 413 f~k~~~~d~~ 422 (457)
T 1kt0_A 413 FKKFAEQDAK 422 (457)
T ss_dssp ----------
T ss_pred Hhhhhhcccc
Confidence 9998876654
No 3
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=6.2e-43 Score=372.35 Aligned_cols=375 Identities=31% Similarity=0.494 Sum_probs=273.6
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEec
Q 008251 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (572)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip 114 (572)
+++|++|+++++|+|...|..||.|.|||++++.||++|++|+..+.|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 68899999999999955599999999999999989999999987778999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCcEEEEEEEeEeeeccccccccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeeccc
Q 008251 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADG 194 (572)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~ 194 (572)
|++|||..+.++.||++++++|+|+|++|... ++..+++++++++..|.|+.+|..|+.|++||++++ +|++|++ .+
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~-~~ 185 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDC-RD 185 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEE-EE
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEec-Cc
Confidence 99999999988899999999999999999865 566888999999999999999999999999999999 8888886 57
Q ss_pred eEEEeCCC---CCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecccceeeeeCCcc
Q 008251 195 VEFTVKDG---HFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKK 271 (572)
Q Consensus 195 ~~~~~g~~---~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~ 271 (572)
+.|.+|.| .++++|+.||..|+.|+++.|.++|.++|+..|.+ ...|||++++.|.+.+.+|....+.....
T Consensus 186 ~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~----~~~ip~~~~l~y~~~l~~~~~A~~~~~~~- 260 (457)
T 1kt0_A 186 VAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKP----KFGIEPNAELIYEVTLKSFEKAKESWEMD- 260 (457)
T ss_dssp EEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBG----GGTBCTTCCEEEEEEEEEEECCCCGGGSC-
T ss_pred eEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCc----ccCCCCCCEEEEEhhhhhcccCcchhhcC-
Confidence 89999976 48999999999999999999999999999988864 23689999999999999886522211000
Q ss_pred eEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCc-chhhHHHHHHhccCCCcEEEEEEcC
Q 008251 272 VIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALLTIAP 350 (572)
Q Consensus 272 ~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v~i~~ 350 (572)
+. ..|... ..+..-|.. -+..|+. .-+..++.++... |
T Consensus 261 -----~~-----~~~~~a-------~~~~~~G~~-------------~~~~g~~~~A~~~y~~Al~~~-----------p 299 (457)
T 1kt0_A 261 -----TK-----EKLEQA-------AIVKEKGTV-------------YFKGGKYMQAVIQYGKIVSWL-----------E 299 (457)
T ss_dssp -----HH-----HHHHHH-------HHHHHHHHH-------------HHHTTCHHHHHHHHHHHHHHH-----------T
T ss_pred -----HH-----HHHHHH-------HHHHHHHHH-------------HHhCCCHHHHHHHHHHHHHHh-----------c
Confidence 00 000000 000000000 0111211 1222333333211 1
Q ss_pred CCccCCccccccccCCCCCCcEEEEEEEEEeeecccccCCChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhh
Q 008251 351 EYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (572)
Q Consensus 351 ~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (572)
.+..+ . .+ ...+.....+..+.++|.++++.++|++|+..|++|+++.+
T Consensus 300 -----------------~~~~~---------~--~~---~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 348 (457)
T 1kt0_A 300 -----------------MEYGL---------S--EK---ESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS 348 (457)
T ss_dssp -----------------TCCSC---------C--HH---HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred -----------------ccccC---------C--hH---HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 00000 0 00 00122334467889999999999999999999999999877
Q ss_pred ccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 008251 431 YDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFD 504 (572)
Q Consensus 431 ~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~ 504 (572)
.+ ..+++++|.||+++++|++|+.+|++|++++|++..+++.++.++..++++++|...
T Consensus 349 ~~---------------~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 349 AN---------------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp TC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 345899999999999999999999999999999999999999999999999988754
No 4
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=8.8e-40 Score=320.98 Aligned_cols=223 Identities=44% Similarity=0.762 Sum_probs=205.2
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEec
Q 008251 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (572)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip 114 (572)
.++||+|+++++|+|...|..||.|.|||++++.||++|++++..+.|+.|.+|.+++++||++||.+|++|++++|+||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 58899999999999955599999999999999999999999987678999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCcEEEEEEEeEeeeccccc--cccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec
Q 008251 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSVKDIC--KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA 192 (572)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~--~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (572)
|++|||..+.++.||++++++|+|+|+++... ++. .++++.++++++|.|...++.||.|++||++++ +|++|++
T Consensus 129 p~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~-~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~- 205 (280)
T 1q1c_A 129 PEYAYGSAGSPPKIPPNATLVFEVELFEFKGE-DLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ- 205 (280)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-
T ss_pred cHHhCCCcCccCCCCCCCcEEEEEEeeeeccc-ccccccccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-
Confidence 99999999988899999999999999999864 443 788899999999999878999999999999998 8998887
Q ss_pred cceEEEeCCCC---CcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEEeccccee
Q 008251 193 DGVEFTVKDGH---FCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVS 264 (572)
Q Consensus 193 ~~~~~~~g~~~---~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~ 264 (572)
.++.|.+|.++ +++||+++|.+|++||+++|.|||+++||..+.+ ...||||++|+|+|+|+++....
T Consensus 206 ~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~----~~~IP~~~~l~f~V~L~~i~~~~ 276 (280)
T 1q1c_A 206 RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKE----KFQIPPNAELKYELHLKSFEKAK 276 (280)
T ss_dssp EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBG----GGTBCTTCCEEEEEEEEEEECCC
T ss_pred CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCc----cCccCCCCeEEEEEEEEEEeCCC
Confidence 68999999987 5999999999999999999999999999988753 12599999999999999987643
No 5
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=8.3e-37 Score=311.99 Aligned_cols=278 Identities=39% Similarity=0.704 Sum_probs=258.4
Q ss_pred eeeeCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcc---hhhHHHHHHhccCC
Q 008251 264 SEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMKK 340 (572)
Q Consensus 264 ~d~~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~---vi~gle~~l~~M~~ 340 (572)
.+++.|++++|+|+++|.|..+|..|++|+|||.+++ +|++||++ |++|.+|.+. ++++|+.||..|++
T Consensus 19 ~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-------~~~f~lG~g~~~~~~~~~e~al~~~~~ 90 (336)
T 1p5q_A 19 SHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-------ELRFEIGEGENLDLPYGLERAIQRMEK 90 (336)
T ss_dssp ---CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-------EEEEETTCGGGGTCCHHHHHHHTTCCT
T ss_pred eeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-------CeEEEeCCCCccccchHHHHHHhcCCC
Confidence 5667899999999999999778999999999999999 89999864 7999999986 58999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEeeecccccCCChHHHHHHHhhhHHHHHHHHHcCcHHHHHH
Q 008251 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASK 420 (572)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~ 420 (572)
||++.+.++|.++||..+... ..+|+++.+.|+++|.++.+....|.+..+.....+..++..|+.+++.|+|.+|+.
T Consensus 91 Ge~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~ 168 (336)
T 1p5q_A 91 GEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALL 168 (336)
T ss_dssp TCEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999987653 358999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHH
Q 008251 421 RYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDL 500 (572)
Q Consensus 421 ~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~ 500 (572)
.|++|+.+.+.......+.......+...+++|+|.||+++++|++|+.+|+++|+++|+++++|+++|.+|..+|++++
T Consensus 169 ~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~ 248 (336)
T 1p5q_A 169 QYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFEL 248 (336)
T ss_dssp HHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH
Confidence 99999999998877777788888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 008251 501 AEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMSMFG 551 (572)
Q Consensus 501 A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~~~~~~~ 551 (572)
|+.+|++|++++|++..+...+..+...+.+.+++++.+|++||.++....
T Consensus 249 A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 299 (336)
T 1p5q_A 249 ARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEE 299 (336)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999998876644
No 6
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-37 Score=317.92 Aligned_cols=277 Identities=34% Similarity=0.526 Sum_probs=212.4
Q ss_pred CcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecC-CcEEEecCCCCCcccEEEEcCCc-chhhHHHHHHhccCCCcEEEE
Q 008251 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQD-GTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALL 346 (572)
Q Consensus 269 d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~-g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v 346 (572)
+.++.++|+++|.|. .|..|+.|+|||.+++.+ |++|+++.. .+.|++|.+|.+ .+|+||+.+|.+|++||++.|
T Consensus 48 ~~~~~~~~~~~g~g~-~~~~gd~v~v~y~g~~~~~g~~fd~~~~--~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~ 124 (338)
T 2if4_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWH--EQQPIELVLGKEKKELAGLAIGVASMKSGERALV 124 (338)
T ss_dssp ETTEEEEEEECCBSC-CCCTTCEEEEEEEEEETTTCCCCEEHHH--HTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEE
T ss_pred CCCeEEEEEeCCCCC-CCCCCCEEEEEEEEEEcCCCcEeecccC--CCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEE
Confidence 568999999999995 899999999999999985 999998742 467999999999 899999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCcEEEEEEEEEeeecc---cccCCChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHH
Q 008251 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEK---ESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYE 423 (572)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~~---~~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~ 423 (572)
+|+|.++||..+... ...||+++++.|.|+|+++.... ..|.++.++++..+..++.+|+.+++.|+|..|+..|.
T Consensus 125 ~i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~ 203 (338)
T 2if4_A 125 HVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYE 203 (338)
T ss_dssp EECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHH
T ss_pred EECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 999999999887532 24689999999999999987644 46888999999999999999999999999999999999
Q ss_pred HHHHHhhccC--CCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHH
Q 008251 424 KAVKYIEYDT--SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLA 501 (572)
Q Consensus 424 ~al~~~~~~~--~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A 501 (572)
+|+.+.+.+. ............+...+++|+|.||+++++|++|+.+|+++|+++|+++++|+++|.+|..+++|++|
T Consensus 204 ~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A 283 (338)
T 2if4_A 204 MAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSA 283 (338)
T ss_dssp HHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999877643 12223334455566678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 008251 502 EFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMSM 549 (572)
Q Consensus 502 ~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~~~~~ 549 (572)
+.+|+++++++|++..+...+..+....+....++++.|++||.....
T Consensus 284 ~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~ 331 (338)
T 2if4_A 284 RDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDE 331 (338)
T ss_dssp HHHHHHTTC---------------------------------------
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 999999999999999999999999888888888888899999976443
No 7
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=5.7e-37 Score=313.42 Aligned_cols=220 Identities=39% Similarity=0.689 Sum_probs=206.3
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEec
Q 008251 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (572)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip 114 (572)
.+.++.++++++|.|+..|..||.|.|||++++.||++|+++ .++.|.+|.+.+++||++||.+|++||++.|+||
T Consensus 125 ~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~----~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~ 200 (356)
T 3jxv_A 125 KDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKS----EGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVK 200 (356)
T ss_dssp SSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEE----EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEEC
T ss_pred cCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEecc----CCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEC
Confidence 568999999999999999999999999999999999999988 4799999999999999999999999999999999
Q ss_pred CCCccCCCCCCC-----CCCCCCcEEEEEEEeEeeeccccccccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEe
Q 008251 115 PELAYGESGSPP-----TIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVV 189 (572)
Q Consensus 115 ~~~ayg~~~~~~-----~ip~~~~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~ 189 (572)
|+++||+.+.++ .||++++|.|+|+|++|..+.++..+.++.++++++|.|+..|+.||.|++||++++.+|++|
T Consensus 201 p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~f 280 (356)
T 3jxv_A 201 PQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVF 280 (356)
T ss_dssp GGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEE
T ss_pred hHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEE
Confidence 999999998764 699999999999999999989999999999999999999999999999999999999999999
Q ss_pred eec-----cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEEeccc
Q 008251 190 GKA-----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWK 261 (572)
Q Consensus 190 ~~~-----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (572)
+++ +|+.|.+|.+++++||+++|.+|++||+++|+|||++|||+.+.. ....||||++|+|+|+|++|.
T Consensus 281 d~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~---~~~~Ip~~~~l~f~vel~~~~ 354 (356)
T 3jxv_A 281 LKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESK---QDAIVPPNSTVIYEVELVSFV 354 (356)
T ss_dssp EEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEE---SSSEECTTCCEEEEEEEEEEE
T ss_pred eeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcC---CCCcCCcCCeEEEEEEEEEEE
Confidence 865 689999999999999999999999999999999999999987642 124699999999999999985
No 8
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=2.5e-36 Score=296.44 Aligned_cols=223 Identities=37% Similarity=0.671 Sum_probs=202.7
Q ss_pred cccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEeCCCCCcchHHHHHhhccCCcEEEEEec
Q 008251 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK 226 (572)
Q Consensus 151 ~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp 226 (572)
.++++.++++++|.|...+..||.|++||++++.+|++|+++ .|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 678999999999999777999999999999999999999986 6899999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecccceeeee--CCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCc
Q 008251 227 PQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGT 304 (572)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~--~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~ 304 (572)
|++|||+.|.+ +.|||+++|+|+|+|++|.. .++. .|+++.++++++|.|...|..|+.|+|||.+++ +|+
T Consensus 129 p~~aYG~~g~~-----~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~ 201 (280)
T 1q1c_A 129 PEYAYGSAGSP-----PKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDK 201 (280)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTE
T ss_pred cHHhCCCcCcc-----CCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceEEEEEEEEe-CCE
Confidence 99999998864 57999999999999999986 5666 789999999999999778999999999999998 899
Q ss_pred EEEecCCCCCcccEEEEcCCcc---hhhHHHHHHhccCCCcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEe
Q 008251 305 VFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (572)
Q Consensus 305 ~~~~~~~~~~~~~~~~~lg~~~---vi~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~ 381 (572)
+|++ .++.|.+|.+. +|+||+.+|.+|++||++.|.++|+|+||..+... ..||+++++.|+|+|+++
T Consensus 202 ~fd~-------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~--~~IP~~~~l~f~V~L~~i 272 (280)
T 1q1c_A 202 LFDQ-------RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSF 272 (280)
T ss_dssp EEEE-------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGG--GTBCTTCCEEEEEEEEEE
T ss_pred EEec-------CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCcc--CccCCCCeEEEEEEEEEE
Confidence 9975 37999999997 59999999999999999999999999999876542 259999999999999999
Q ss_pred eecccccC
Q 008251 382 EKEKESWD 389 (572)
Q Consensus 382 ~~~~~~~~ 389 (572)
.+.++.|+
T Consensus 273 ~~~~~~W~ 280 (280)
T 1q1c_A 273 EKAKESWE 280 (280)
T ss_dssp ECCCC---
T ss_pred eCCCCCCC
Confidence 99888884
No 9
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.93 E-value=6.1e-26 Score=231.59 Aligned_cols=295 Identities=19% Similarity=0.254 Sum_probs=173.5
Q ss_pred CCcCccCCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecC-CCEEeecCCCCCceEEEcCCC-ccchhHHHH
Q 008251 22 DAPMMKVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQG-NVIKGWDIG 99 (572)
Q Consensus 22 ~~~~~~~~~~~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~-g~~~~~t~~~~~p~~~~~G~~-~~~~g~e~a 99 (572)
++.++++.....+.++|+.|+++++|+| ..|..||.|.|||++++.+ |++|++++..+.|+.|.+|.+ ++|+||+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~ 112 (338)
T 2if4_A 34 GNVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIG 112 (338)
T ss_dssp -CCCCCCCSCCEEEETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHH
T ss_pred cCCCCCCCcCceeCCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHH
Confidence 3444467767777899999999999999 7899999999999999985 999999976668999999999 899999999
Q ss_pred HcccccCcEEEEEecCCCccCCCCC--CCCCCCCCcEEEEEEEeEeeeccccccccceEEEEeecCcccCCCCCCCeEEE
Q 008251 100 IKTMKKGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLV 177 (572)
Q Consensus 100 l~gm~~Ge~~~i~ip~~~ayg~~~~--~~~ip~~~~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g~g~~~~~~~d~V~v 177 (572)
|.||++|++++|+|||+++||..+. .+.||++++++|.|+|+.+.......
T Consensus 113 l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~--------------------------- 165 (338)
T 2if4_A 113 VASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGK--------------------------- 165 (338)
T ss_dssp HHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCB---------------------------
T ss_pred HhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCcccc---------------------------
Confidence 9999999999999999999999886 35788899999988887765311100
Q ss_pred EEEEEeCCCeEeeeccceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEE
Q 008251 178 NYEARLEDGMVVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALEL 257 (572)
Q Consensus 178 ~y~~~~~~g~~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l 257 (572)
..+-..+++-+.
T Consensus 166 ------------------------~~~~~~~~~~~~-------------------------------------------- 177 (338)
T 2if4_A 166 ------------------------ARSDMTVEERIG-------------------------------------------- 177 (338)
T ss_dssp ------------------------TTTBCCHHHHHH--------------------------------------------
T ss_pred ------------------------ccccCCHHHHHH--------------------------------------------
Confidence 000000000000
Q ss_pred ecccceeeeeCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCc-chhhHHHHHHh
Q 008251 258 VSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVI 336 (572)
Q Consensus 258 ~~~~~~~d~~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~ 336 (572)
.... +..-|..+. ..|+. .-+..++.++.
T Consensus 178 ----~a~~---------------------------------~~~~g~~~~-------------~~g~~~~A~~~y~~Al~ 207 (338)
T 2if4_A 178 ----AADR---------------------------------RKMDGNSLF-------------KEEKLEEAMQQYEMAIA 207 (338)
T ss_dssp ----HHHH---------------------------------HHHHHHHTC-------------SSSCCHHHHHHHHHHHH
T ss_pred ----HHHH---------------------------------HHHHHHHHH-------------hcCCHHHHHHHHHHHHH
Confidence 0000 000010000 01111 12333455443
Q ss_pred ccCCCcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEeeecccccCCChHHHHHHHhhhHHHHHHHHHcCcHH
Q 008251 337 TMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYA 416 (572)
Q Consensus 337 ~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~ 416 (572)
...... .|...+.. ...........+...|..+++.++|.
T Consensus 208 ~~p~~~----------~~~~~~~~------------------------------~~~~~~l~~~~~~nla~~~~~~g~~~ 247 (338)
T 2if4_A 208 YMGDDF----------MFQLYGKY------------------------------QDMALAVKNPCHLNIAACLIKLKRYD 247 (338)
T ss_dssp HSCHHH----------HHTCCHHH------------------------------HHHHHHHHTHHHHHHHHHHHTTTCCH
T ss_pred Hhccch----------hhhhcccH------------------------------HHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 211000 00000000 00000111236789999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHhc
Q 008251 417 RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA-YIQM 495 (572)
Q Consensus 417 ~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a-~~~l 495 (572)
+|+..|++|+++.+.+ ..+++++|.+|+.+++|++|+.+++++++++|++..++..++.+ ....
T Consensus 248 ~A~~~~~~al~~~p~~---------------~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~ 312 (338)
T 2if4_A 248 EAIGHCNIVLTEEEKN---------------PKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEK 312 (338)
T ss_dssp HHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 9999999999987653 24589999999999999999999999999999999999999999 4456
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH
Q 008251 496 ADLDLAEFDIKKALEIDPDNRD 517 (572)
Q Consensus 496 ~~~~~A~~~~~~al~l~P~~~~ 517 (572)
+..++|...|++++.+.|++..
T Consensus 313 ~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 313 ALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHhhCCCCCCCC
Confidence 7788999999999999999853
No 10
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.91 E-value=8.1e-24 Score=179.26 Aligned_cols=111 Identities=51% Similarity=0.889 Sum_probs=104.2
Q ss_pred eecCCCeEEEEEEcccCCCC-CCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEE
Q 008251 33 EIGNQGLKKKLVKEGEGWDT-PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (572)
Q Consensus 33 ~~~~~g~~~~~~~~G~G~~~-~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i 111 (572)
++.++|++|+++++|+| .. ++.||.|.|||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 2 ~~~~~g~~~~~~~~G~g-~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v 80 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDG-ATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARL 80 (113)
T ss_dssp EECGGGCEEEEEECCCS-SCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEE
T ss_pred CCCCCCeEEEEEECCCC-cccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEE
Confidence 35789999999999999 55 99999999999999989999999987668999999999999999999999999999999
Q ss_pred EecCCCccCCCCCCCCCCCCCcEEEEEEEeEee
Q 008251 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (572)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (572)
.|||++|||+.+.++.||++++++|+|+|+++.
T Consensus 81 ~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 81 TIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred EECHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 999999999999888899999999999998863
No 11
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.91 E-value=1.3e-23 Score=179.78 Aligned_cols=109 Identities=46% Similarity=0.832 Sum_probs=102.0
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCC-------CCceEEEcCCCccchhHHHHHcccccCc
Q 008251 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDR-------STPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (572)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~-------~~p~~~~~G~~~~~~g~e~al~gm~~Ge 107 (572)
.|+|++|+++++|+|...|+.||.|.|||++++.||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 589999999999999667999999999999999999999999752 4899999999999999999999999999
Q ss_pred EEEEEecCCCccCCCCCCC-CCCCCCcEEEEEEEeEe
Q 008251 108 NAVFTIPPELAYGESGSPP-TIPPNATLQFDVELLSW 143 (572)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~-~ip~~~~l~~~v~l~~~ 143 (572)
+++|+|||++|||+.+.++ .||++++|+|+|+|+++
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999999999999998764 79999999999999886
No 12
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.91 E-value=1.2e-23 Score=185.63 Aligned_cols=111 Identities=52% Similarity=0.906 Sum_probs=105.7
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEec
Q 008251 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (572)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip 114 (572)
.++|++|+++++|+|...|..||.|.|||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 112 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 112 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEC
Confidence 58999999999999955899999999999999999999999987778999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCcEEEEEEEeEeee
Q 008251 115 PELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (572)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (572)
|++|||..+.++.||++++|+|+|+|+++..
T Consensus 113 p~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 113 PEYAYGSAGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence 9999999998889999999999999999863
No 13
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.90 E-value=1e-23 Score=182.48 Aligned_cols=111 Identities=52% Similarity=0.906 Sum_probs=105.2
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEec
Q 008251 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (572)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip 114 (572)
.++|++|+++++|+|...|+.||.|.|||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 96 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 96 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 68899999999999955799999999999999999999999976668999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCcEEEEEEEeEeee
Q 008251 115 PELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (572)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (572)
|++|||..+.++.||++++|+|+|+|+++..
T Consensus 97 ~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 97 PEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 9999999998889999999999999999863
No 14
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.90 E-value=1.1e-23 Score=183.69 Aligned_cols=112 Identities=55% Similarity=0.988 Sum_probs=105.2
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEec
Q 008251 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (572)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip 114 (572)
.++|++|+++++|+|...++.||.|.|||++++.||++|++++..+.|+.|.+|.+++++||++||.+|++|++++|+||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 67999999999999955799999999999999989999999976558999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCcEEEEEEEeEeeec
Q 008251 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSV 146 (572)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~~ 146 (572)
|++|||+.+.++.||++++++|+|+|+++...
T Consensus 92 ~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 92 SDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred hHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 99999999988899999999999999999864
No 15
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.90 E-value=3.7e-23 Score=179.57 Aligned_cols=110 Identities=53% Similarity=0.881 Sum_probs=104.5
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEE
Q 008251 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (572)
Q Consensus 33 ~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ 112 (572)
...++|++|+++++|+| ..++.||.|.|||++++.||++|+++++.++|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus 24 ~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ 102 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102 (133)
T ss_dssp EECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred EECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 45889999999999999 89999999999999999999999999876789999999999999999999999999999999
Q ss_pred ecCCCccCCCCCCCCCCCCCcEEEEEEEeEe
Q 008251 113 IPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (572)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (572)
|||++|||+.+.++.||++++++|+|+|+++
T Consensus 103 ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 9999999999988789999999999999864
No 16
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.90 E-value=5.5e-24 Score=185.47 Aligned_cols=126 Identities=36% Similarity=0.637 Sum_probs=105.6
Q ss_pred CCCCCCcCccCCceee--ecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEec-CCCEEeecCCCCCceEEEcCCCccch
Q 008251 18 DLPDDAPMMKVGEEKE--IGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIK 94 (572)
Q Consensus 18 ~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~-~g~~~~~t~~~~~p~~~~~G~~~~~~ 94 (572)
+.++..|+..+.++.. +.++|++|+++++|+| ..+..||.|.|||++++. +|++|++++..++|+.|.+|.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~ 83 (134)
T 3b7x_A 5 DAPGQSLYERLSQRMLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLW 83 (134)
T ss_dssp ----CCHHHHHTTTCEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCH
T ss_pred cCCCCChhHHhccccceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhH
Confidence 4566778887766653 4899999999999999 778899999999999988 69999999876689999999999999
Q ss_pred hHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEeEee
Q 008251 95 GWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (572)
Q Consensus 95 g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (572)
||++||.+|++|++++|+|||++|||+.+.++.||++++++|+|+|+++.
T Consensus 84 G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 84 GMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp HHHHHHHTCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred HHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 99999999999999999999999999999888899999999999999874
No 17
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=5.3e-23 Score=187.95 Aligned_cols=130 Identities=29% Similarity=0.552 Sum_probs=114.8
Q ss_pred CCCCCCcCccCCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEec-CCCEEeecCCCCCceEEEcCCC-ccchh
Q 008251 18 DLPDDAPMMKVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQG-NVIKG 95 (572)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~-~g~~~~~t~~~~~p~~~~~G~~-~~~~g 95 (572)
-+++.+++.+..+...++++|++|+++++|+| ..|..||.|.|||++++. +|++|++++..+.|+.|.+|.+ ++++|
T Consensus 30 ~~~~~~~p~~~~~~~~~~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G 108 (180)
T 2f4e_A 30 PSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAG 108 (180)
T ss_dssp ----CCSCCCCCSCCEEEETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHH
T ss_pred CCCcccCCcccCCCcEECCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHH
Confidence 34445555677777788999999999999999 799999999999999998 6999999987778999999999 99999
Q ss_pred HHHHHcccccCcEEEEEecCCCccCCCCC--CCCCCCCCcEEEEEEEeEeeeccc
Q 008251 96 WDIGIKTMKKGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTSVKD 148 (572)
Q Consensus 96 ~e~al~gm~~Ge~~~i~ip~~~ayg~~~~--~~~ip~~~~l~~~v~l~~~~~~~~ 148 (572)
|+++|.+|++|++++|+|||++|||..+. ++.||++++++|+|+|+++.....
T Consensus 109 ~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 109 LAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp HHHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCC
T ss_pred HHHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCcc
Confidence 99999999999999999999999999886 468999999999999999986543
No 18
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.90 E-value=3.4e-23 Score=173.71 Aligned_cols=106 Identities=51% Similarity=0.943 Sum_probs=99.7
Q ss_pred CeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCC
Q 008251 38 GLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPEL 117 (572)
Q Consensus 38 g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ 117 (572)
|++|+++++|+|...++.||.|.|||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++++|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 78999999999944499999999999999999999999976557999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCcEEEEEEEeEe
Q 008251 118 AYGESGSPPTIPPNATLQFDVELLSW 143 (572)
Q Consensus 118 ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (572)
|||+.+.++.||++++++|+|+|+++
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999988889999999999999876
No 19
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.89 E-value=4.2e-23 Score=178.62 Aligned_cols=111 Identities=55% Similarity=0.976 Sum_probs=103.3
Q ss_pred eecCCCeEEE--EEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEE
Q 008251 33 EIGNQGLKKK--LVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (572)
Q Consensus 33 ~~~~~g~~~~--~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~ 110 (572)
..+++|++|+ ++++|+|...++.||.|.|||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++++
T Consensus 18 ~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 18 GPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred eeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 4478999999 99999994339999999999999988999999998766899999999999999999999999999999
Q ss_pred EEecCCCccCCCCCCCCCCCCCcEEEEEEEeEe
Q 008251 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (572)
Q Consensus 111 i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (572)
|.|||++|||+.+.++.||++++++|+|+|+++
T Consensus 98 v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 98 FTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred EEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 999999999999988889999999999999864
No 20
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.89 E-value=1.4e-22 Score=174.81 Aligned_cols=111 Identities=38% Similarity=0.668 Sum_probs=103.7
Q ss_pred eecCCCeEEEEEEccc--CCCCCCCCCEEEEEEEEEec-CCCEEeecCC--CCCceEEEcCCCccchhHHHHHcccccCc
Q 008251 33 EIGNQGLKKKLVKEGE--GWDTPENGDEVEVHYTGTLL-DGTQFDSSRD--RSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (572)
Q Consensus 33 ~~~~~g~~~~~~~~G~--G~~~~~~gd~V~v~y~~~~~-~g~~~~~t~~--~~~p~~~~~G~~~~~~g~e~al~gm~~Ge 107 (572)
.+.++|++|+++++|+ | ..++.||.|.|||++++. ||++|++++. .+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 8 ~~~~~gl~~~~l~~g~~~g-~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 86 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICH-RKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGE 86 (125)
T ss_dssp GCCCCCCEEEEEECCSCCS-CCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTC
T ss_pred EECCCCeEEEEEEcCCCCC-CcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCC
Confidence 4588999999999998 6 889999999999999998 9999999973 35899999999999999999999999999
Q ss_pred EEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEeEeee
Q 008251 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (572)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (572)
+++|.|||++|||+.+.+ .||++++++|+|+|+++..
T Consensus 87 ~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 87 KRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp EEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEc
Confidence 999999999999999965 8999999999999999864
No 21
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.88 E-value=1e-22 Score=183.04 Aligned_cols=111 Identities=43% Similarity=0.712 Sum_probs=104.3
Q ss_pred eeecCCCeEEEEEEcccCCCC-CCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEE
Q 008251 32 KEIGNQGLKKKLVKEGEGWDT-PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (572)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~-~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~ 110 (572)
...+++|++|+++++|+| .. |..||.|.|||++++.||++|++++.++.|+.|.+| ++|+||+++|.+|++|++++
T Consensus 32 ~~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~~~ 108 (167)
T 1jvw_A 32 AVKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGDRWR 108 (167)
T ss_dssp EEECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTCEEE
T ss_pred cEECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCCEEE
Confidence 456899999999999999 66 999999999999999999999999866689999995 89999999999999999999
Q ss_pred EEecCCCccCCCCCCCCCCCCCcEEEEEEEeEeee
Q 008251 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (572)
Q Consensus 111 i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (572)
|+|||++|||..+.++.||+|++++|+|+|+++..
T Consensus 109 ~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 109 LFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKD 143 (167)
T ss_dssp EEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG
T ss_pred EEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc
Confidence 99999999999998888999999999999999875
No 22
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.88 E-value=6.1e-23 Score=182.52 Aligned_cols=114 Identities=25% Similarity=0.408 Sum_probs=97.4
Q ss_pred ecCCCeEEEEEEcccCCCC--CCCCCEEEEEEEEEecC--CCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEE
Q 008251 34 IGNQGLKKKLVKEGEGWDT--PENGDEVEVHYTGTLLD--GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (572)
Q Consensus 34 ~~~~g~~~~~~~~G~G~~~--~~~gd~V~v~y~~~~~~--g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~ 109 (572)
++++||+|+++++|+| .. +..||.|.|||++++.| |++||||+.+++|+.|.+|.+++|+||++||.+|++|+++
T Consensus 7 ~~~~Gv~~~vl~~G~G-~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRG-ELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HHTTSCCCCEEECCSS-CCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred ccCCCeEEEEEECCcC-CCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 4789999999999999 44 35899999999999964 9999999998899999999999999999999999999999
Q ss_pred EEEecCCCccCCC--------CCCCC-----------------------------CCCCCcEEEEEEEeEeeeccc
Q 008251 110 VFTIPPELAYGES--------GSPPT-----------------------------IPPNATLQFDVELLSWTSVKD 148 (572)
Q Consensus 110 ~i~ip~~~ayg~~--------~~~~~-----------------------------ip~~~~l~~~v~l~~~~~~~~ 148 (572)
+|+|||++|||.. ..... ++++++|+|+|||+++..+..
T Consensus 86 ~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 86 QFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred EEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 9999999999921 00111 233477999999999987544
No 23
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.88 E-value=2.5e-22 Score=187.04 Aligned_cols=106 Identities=34% Similarity=0.616 Sum_probs=101.2
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEE
Q 008251 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (572)
Q Consensus 33 ~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ 112 (572)
..+++|++|+++++|+| ..|..||.|.|||++++.||++|++| +.|+.|.+| ++|+||+++|.+|++|++++|+
T Consensus 113 ~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 113 KELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp EECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 45899999999999999 89999999999999999999999999 589999998 8999999999999999999999
Q ss_pred ecCCCccCCCCCCCCCCCCCcEEEEEEEeEee
Q 008251 113 IPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (572)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (572)
|||++|||..+.++.|||+++|+|+|+|+++.
T Consensus 187 IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99999999999887899999999999999885
No 24
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.88 E-value=3.2e-22 Score=187.12 Aligned_cols=131 Identities=47% Similarity=0.817 Sum_probs=113.6
Q ss_pred CCCccCCCCCCCcC----ccCCce-eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEE
Q 008251 12 EMDADMDLPDDAPM----MKVGEE-KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFT 86 (572)
Q Consensus 12 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~ 86 (572)
.-|..+...++.-. .+.+.. ...+++|++|+++++|+| ..|..||.|.|||++++.||++|++++..+.|+.|.
T Consensus 74 ~Tpk~L~~ed~d~I~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~ 152 (209)
T 3uf8_A 74 QTPEDLDMEDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFV 152 (209)
T ss_dssp CCTTTTTCCTTEEEEEECSCTTCCCCEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEE
T ss_pred CChHHhhhcccccchhhccccccccccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEE
Confidence 34555555555433 222222 345899999999999999 789999999999999999999999998777899999
Q ss_pred cCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEeEe
Q 008251 87 LGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (572)
Q Consensus 87 ~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (572)
+|.+++++||++||.+|++|++++|+|||++|||..+.++.||++++|+|+|+|+++
T Consensus 153 lG~g~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 153 LGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp TTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred eCCCccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 999999999999999999999999999999999999988889999999999999864
No 25
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.88 E-value=6.4e-22 Score=171.60 Aligned_cols=112 Identities=46% Similarity=0.833 Sum_probs=101.0
Q ss_pred eecCCCe-EEEEEEcc---cCCCCCCCCCEEEEEEEEEe-cCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCc
Q 008251 33 EIGNQGL-KKKLVKEG---EGWDTPENGDEVEVHYTGTL-LDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (572)
Q Consensus 33 ~~~~~g~-~~~~~~~G---~G~~~~~~gd~V~v~y~~~~-~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge 107 (572)
.++++|+ +++++++| +| ..++.||.|.|||++++ .||++|++++..+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 11 ~~~~~g~~~~~il~~G~~g~g-~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge 89 (129)
T 2vn1_A 11 ELTADGGVIKTILKKGDEGEE-NIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNE 89 (129)
T ss_dssp ECSTTSSEEEEEEECCCCSGG-GSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred EECCCCCEEEEEEeCCCCCCC-CcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCC
Confidence 3455655 45799966 45 88999999999999998 6999999998766899999999999999999999999999
Q ss_pred EEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEeEeee
Q 008251 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (572)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (572)
+++|+|||++|||+.+.++.||++++++|+|+|+++..
T Consensus 90 ~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 90 KCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 99999999999999998888999999999999999874
No 26
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.87 E-value=9.3e-22 Score=167.75 Aligned_cols=108 Identities=34% Similarity=0.563 Sum_probs=100.0
Q ss_pred eecCCC-eEEEEEEcccCC-CCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEE
Q 008251 33 EIGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (572)
Q Consensus 33 ~~~~~g-~~~~~~~~G~G~-~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~ 110 (572)
.+.++| ++|+++++|+|. ..|+.||.|.|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~ 83 (118)
T 2awg_A 8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 83 (118)
T ss_dssp ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEEE
Confidence 456677 999999999993 27999999999999998899999984 799999999999999999999999999999
Q ss_pred EEecCCCccCCCCCCCCCCCCCcEEEEEEEeEee
Q 008251 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (572)
Q Consensus 111 i~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~ 144 (572)
|.|||++|||..+.++.||++++++|+|+|+++.
T Consensus 84 ~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 84 VTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 9999999999999888899999999999999875
No 27
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.87 E-value=6.8e-22 Score=175.55 Aligned_cols=110 Identities=34% Similarity=0.574 Sum_probs=102.0
Q ss_pred eecCCCe-EEEEEEcccCCC--CCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEE
Q 008251 33 EIGNQGL-KKKLVKEGEGWD--TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (572)
Q Consensus 33 ~~~~~g~-~~~~~~~G~G~~--~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~ 109 (572)
.++++|+ +|+++++|+| . .|..||.|.|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|+++
T Consensus 38 ~~~~sG~v~~~vl~~G~G-~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~ 112 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPP-GSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 112 (157)
T ss_dssp ESSSSSSEEEEEEECCST-TSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEE
T ss_pred eECCCCCEEEEEEEccCC-CccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEE
Confidence 3578886 8999999999 5 8999999999999999999999984 79999999999999999999999999999
Q ss_pred EEEecCCCccCCCC-CCCCCCCCCcEEEEEEEeEeeecc
Q 008251 110 VFTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSVK 147 (572)
Q Consensus 110 ~i~ip~~~ayg~~~-~~~~ip~~~~l~~~v~l~~~~~~~ 147 (572)
+|+|||++|||..+ .++.||++++++|+|+|+++...+
T Consensus 113 ~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 113 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred EEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccc
Confidence 99999999999999 677899999999999999987643
No 28
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.87 E-value=1.7e-22 Score=175.02 Aligned_cols=111 Identities=41% Similarity=0.706 Sum_probs=103.0
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcc------ccc
Q 008251 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKT------MKK 105 (572)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~g------m~~ 105 (572)
....++|++|+++++|+| ..++.||.|.|||++++.||++|++++..++|+.|.+|.+++++||+++|.| |++
T Consensus 7 ~~~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 7 FSVSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp CEECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred cEECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 345889999999999999 8899999999999999989999999976558999999999999999999999 999
Q ss_pred CcEEEEEecCCCccCCCCCC-----CCCCCCCcEEEEEEEeEe
Q 008251 106 GENAVFTIPPELAYGESGSP-----PTIPPNATLQFDVELLSW 143 (572)
Q Consensus 106 Ge~~~i~ip~~~ayg~~~~~-----~~ip~~~~l~~~v~l~~~ 143 (572)
|++++|.|||++|||+.+.+ +.||+|++++|+|+|+++
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999998863 479999999999999876
No 29
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.87 E-value=5.7e-22 Score=185.01 Aligned_cols=111 Identities=36% Similarity=0.624 Sum_probs=104.2
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEE
Q 008251 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (572)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i 111 (572)
...+++|++|+++++|+| ..|..||.|.|||++++.||++|++++.++.|+.|.+| ++|+||+++|.+|++|++++|
T Consensus 101 v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v 177 (213)
T 1fd9_A 101 VVVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEI 177 (213)
T ss_dssp EEECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEEEE
T ss_pred cEECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCEEEE
Confidence 356899999999999999 89999999999999999999999999876689999995 899999999999999999999
Q ss_pred EecCCCccCCCCCCCCCCCCCcEEEEEEEeEeee
Q 008251 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (572)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~~~ 145 (572)
+|||++|||+.+.++.||++++++|+|+|+++..
T Consensus 178 ~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 178 YVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred EECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 9999999999998788999999999999999863
No 30
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.86 E-value=2.2e-21 Score=197.60 Aligned_cols=271 Identities=22% Similarity=0.289 Sum_probs=195.6
Q ss_pred ccccccccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeeccceEEEeCCCC---CcchHHHHHhhccCCcEEE
Q 008251 146 VKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADGVEFTVKDGH---FCPTLAKAVKTMKKGEKVL 222 (572)
Q Consensus 146 ~~~~~~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~~g~~~---~~~gl~~~l~~m~~Ge~~~ 222 (572)
..+++.++++.+++++.|.|...|..|+.|+|||++++ +|++|+++ |+.|.+|.|. ++++|+++|.+|+.|+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~ 95 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI 95 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred ceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence 34567889999999999999878999999999999999 89999886 8999999886 5899999999999999999
Q ss_pred EEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecccceeeeeCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecC
Q 008251 223 LAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQD 302 (572)
Q Consensus 223 i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~ 302 (572)
+.+||+++||..|.+ ...||+++++.|++.|.+|........ +.+. ..|... .. +..-
T Consensus 96 l~i~p~~ayg~~g~~----~~~i~~~~~l~f~~~L~~~~~A~~~~~------~a~~-----~~p~~a---~~----~~~~ 153 (336)
T 1p5q_A 96 VYLKPSYAFGSVGKE----KFQIPPNAELKYELHLKSFEKAKESWE------MNSE-----EKLEQS---TI----VKER 153 (336)
T ss_dssp EEECTTTTTTTTCBG----GGTBCSSCCEEEEEEEEEEECCCCGGG------CCHH-----HHHHHH---HH----HHHH
T ss_pred EEECCccccCcCCCC----ccCCCCCCeEEEEEEEeecccccchhc------CCHH-----HHHHHH---HH----HHHH
Confidence 999999999998874 125899999999999999865222110 0000 000000 00 0000
Q ss_pred CcEEEecCCCCCcccEEEEcCCc-chhhHHHHHHhccCCCcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEe
Q 008251 303 GTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (572)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~ 381 (572)
|.. -+..|+. .-+..++.++... |.+..+
T Consensus 154 g~~-------------~~~~g~~~~A~~~y~~Al~~~----------------------------p~~~~~--------- 183 (336)
T 1p5q_A 154 GTV-------------YFKEGKYKQALLQYKKIVSWL----------------------------EYESSF--------- 183 (336)
T ss_dssp HHH-------------HHHHTCHHHHHHHHHHHHHHT----------------------------TTCCCC---------
T ss_pred HHH-------------HHHCCCHHHHHHHHHHHHHHh----------------------------hccccC---------
Confidence 000 0111221 1223333333221 110000
Q ss_pred eecccccCCChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc
Q 008251 382 EKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL 461 (572)
Q Consensus 382 ~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~ 461 (572)
. .....+.....+..+...|..+++.|+|.+|+..|++|+++.|.+. .+++++|.+|+.+
T Consensus 184 ~-----~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~ 243 (336)
T 1p5q_A 184 S-----NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNE---------------KGLSRRGEAHLAV 243 (336)
T ss_dssp C-----SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHT
T ss_pred C-----hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHC
Confidence 0 0001122333467889999999999999999999999999877533 4589999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHH-HHHHHHHHH
Q 008251 462 KDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLA-EFDIKKALE 510 (572)
Q Consensus 462 ~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A-~~~~~~al~ 510 (572)
++|++|+.+++++++++|++..++++++.++..++++++| ...|++++.
T Consensus 244 g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 244 NDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 456666664
No 31
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.86 E-value=2.2e-21 Score=182.31 Aligned_cols=107 Identities=50% Similarity=0.923 Sum_probs=101.1
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEE
Q 008251 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (572)
Q Consensus 33 ~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ 112 (572)
.++++|++|+++++|+| ..|..||.|.|||++++.||++|++++.++.|+.|.+| ++|+||+++|.+|++|++++|+
T Consensus 117 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 117 KTSSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp EECTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEEEEE
T ss_pred EECCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCEEEEE
Confidence 45789999999999999 89999999999999999999999999877789999995 8999999999999999999999
Q ss_pred ecCCCccCCCCCCCCCCCCCcEEEEEEEeEe
Q 008251 113 IPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (572)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~v~l~~~ 143 (572)
|||++|||..+.++ ||++++++|+|+|+++
T Consensus 194 IP~~laYG~~g~~~-IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 194 IPPELAYGKAGVPG-IPPNSTLVFDVELLDV 223 (224)
T ss_dssp ECGGGTTTTTCBTT-BCTTCCEEEEEEEEEE
T ss_pred ECchhhcCcCCCCC-CCCCCEEEEEEEEEEe
Confidence 99999999999765 9999999999999886
No 32
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.86 E-value=2e-21 Score=175.81 Aligned_cols=154 Identities=29% Similarity=0.392 Sum_probs=132.0
Q ss_pred hHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccC---CCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHH
Q 008251 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT---SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAE 468 (572)
Q Consensus 392 ~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~---~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai 468 (572)
.++++..+..++++|+.+|+.|+|..|+..|.+|+.+++... ....+++.........+++|+|.||+++++|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 456788899999999999999999999999999999865431 23345566677888899999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008251 469 KLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR-DVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (572)
Q Consensus 469 ~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~f~ 545 (572)
.+|+++|+++|+++++|+++|.+|..+|++++|+.+|+++++++|++. .+...+..+...+++.++++++.|++||.
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999998 88999999999999999999999999995
No 33
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.9e-21 Score=169.57 Aligned_cols=113 Identities=34% Similarity=0.539 Sum_probs=102.8
Q ss_pred eeecCCC-eEEEEEEcccCC-CCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEE
Q 008251 32 KEIGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (572)
Q Consensus 32 ~~~~~~g-~~~~~~~~G~G~-~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~ 109 (572)
..++++| ++|+++++|+|. ..++.||.|.|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++
T Consensus 11 ~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~ 86 (135)
T 2d9f_A 11 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 86 (135)
T ss_dssp EESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEE
T ss_pred cEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 3456666 999999999992 28999999999999999999999983 79999999999999999999999999999
Q ss_pred EEEecCCCccCCCC-CCCCCCCCCcEEEEEEEeEeeeccc
Q 008251 110 VFTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSVKD 148 (572)
Q Consensus 110 ~i~ip~~~ayg~~~-~~~~ip~~~~l~~~v~l~~~~~~~~ 148 (572)
+|+|||++|||..+ .++.||++++++|+|+|+++....+
T Consensus 87 ~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 87 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp EEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCS
T ss_pred EEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCc
Confidence 99999999999998 6778999999999999999986544
No 34
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.83 E-value=1.8e-20 Score=155.55 Aligned_cols=96 Identities=52% Similarity=0.898 Sum_probs=90.5
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCC
Q 008251 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (572)
Q Consensus 51 ~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (572)
..++.||.|.|||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|+|||++|||+.+.++.||+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~ 83 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPG 83 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCT
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCc
Confidence 67899999999999998899999999876689999999999999999999999999999999999999999998888999
Q ss_pred CCcEEEEEEEeEeeec
Q 008251 131 NATLQFDVELLSWTSV 146 (572)
Q Consensus 131 ~~~l~~~v~l~~~~~~ 146 (572)
+++++|+|+|+++...
T Consensus 84 ~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 84 GATLVFEVELLKIERR 99 (102)
T ss_dssp TCCEEEEEEEEEEGGG
T ss_pred CCeEEEEEEEEEeccc
Confidence 9999999999998753
No 35
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.83 E-value=5.3e-20 Score=162.17 Aligned_cols=115 Identities=39% Similarity=0.605 Sum_probs=105.4
Q ss_pred eeeee--CCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCC
Q 008251 263 VSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (572)
Q Consensus 263 ~~d~~--~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~ 340 (572)
.+|++ .|++++++++++|+|...|..|+.|+|||++++.||++|+++. ..+.|+.|.+|.+.+|+||+.+|.+|++
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~~i~G~e~~l~gm~~ 103 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSH--DRNEPFVFSLGKGQVIKAWDIGVATMKK 103 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESG--GGTSCEEEETTSSSSCHHHHHHHTTCCB
T ss_pred cccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeec--ccCCCeEEEeCCCcccHHHHHHHhCCCC
Confidence 36666 6899999999999997789999999999999999999999875 3578999999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEee
Q 008251 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (572)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~ 382 (572)
||++.|.|+|.++||..+.. ..||++++|.|+|+|+++.
T Consensus 104 Ge~~~v~ipp~~aYG~~g~~---~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 104 GEICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHCcCCCCCC---CCcCCCCeEEEEEEEEEec
Confidence 99999999999999998765 4799999999999999885
No 36
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.83 E-value=5e-20 Score=160.59 Aligned_cols=118 Identities=32% Similarity=0.594 Sum_probs=100.7
Q ss_pred cccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEeCCCCCcchHHHHHhhccCCcEEEEEec
Q 008251 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK 226 (572)
Q Consensus 151 ~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp 226 (572)
.++++.++++++|.|...+..||.|++||++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 678999999999999768999999999999999999999986 7999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecccceeeee--CCcceEE
Q 008251 227 PQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT--DDKKVIK 274 (572)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~--~d~~~~k 274 (572)
|++|||+.|.+ +.|||+++|+|+|+|+++.. .++. +|++++|
T Consensus 92 ~~~aYG~~g~~-----~~Ip~~~~l~f~v~l~~i~~-~~l~~~~d~~v~k 135 (135)
T 1r9h_A 92 SDYGYGDAGSP-----PKIPGGATLIFEVELFEWSA-EDISPDRDGTILR 135 (135)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC--------------
T ss_pred hHHcCCCCCCC-----CCcCcCCcEEEEEEEEEeec-CCcCcCCCCcccC
Confidence 99999998874 57999999999999999976 4666 6777664
No 37
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=167.68 Aligned_cols=87 Identities=17% Similarity=0.199 Sum_probs=78.7
Q ss_pred eCCcceEEEEEeCCCCcCC-CCCCCEEEEEEEEEecC--CcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcE
Q 008251 267 TDDKKVIKKILKEGDGFER-PNEGAVVKVKLIGKLQD--GTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEV 343 (572)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~-p~~~~~v~v~~~~~l~~--g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~ 343 (572)
+.+.+|.|+|+++|+|... +..|++|+|||+++|.| |++|||++. ++.|++|.+|.+.+|+||+.+|.+|++||+
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~--rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRA--RGKPMELIIGKKFKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTT--TTCCEEEESSSSCSCSHHHHHHTTCCTTCE
T ss_pred ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEeccc--CCCCEEEEecCCCccHHHHHHHhcCccCce
Confidence 3467899999999999532 35799999999999965 999999864 789999999999999999999999999999
Q ss_pred EEEEEcCCCccC
Q 008251 344 ALLTIAPEYAFG 355 (572)
Q Consensus 344 ~~v~i~~~~~yg 355 (572)
+.|+|+|+++||
T Consensus 85 ~~~~ipp~laYG 96 (165)
T 2lkn_A 85 AQFLCDIKHVVL 96 (165)
T ss_dssp EEEECCHHHHSS
T ss_pred EEEEECHHHhcC
Confidence 999999999999
No 38
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.82 E-value=1e-19 Score=166.13 Aligned_cols=127 Identities=35% Similarity=0.503 Sum_probs=102.2
Q ss_pred CcceEEEEEeCCCCcCCCCCCCEEEEEEEEEec-CCcEEEecCCCCCcccEEEEcCCc-chhhHHHHHHhccCCCcEEEE
Q 008251 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALL 346 (572)
Q Consensus 269 d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~-~g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v 346 (572)
+.++.++++++|.|. .|..|+.|+|||.+++. +|++|+++.. .+.|+.|.+|.+ .+|+||+.+|.+|++||++.|
T Consensus 48 ~~gl~~~vl~~G~G~-~~~~Gd~V~v~Y~g~l~~dG~~fdss~~--~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v 124 (180)
T 2f4e_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWH--EQQPIELVLGKEKKELAGLAIGVASMKSGERALV 124 (180)
T ss_dssp ETTEEEEEEECCBSC-CBCTTCEEEEEEEEEETTTCCEEEETTT--TTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEE
T ss_pred CCceEEEEEeCCCCC-CCCCCCEEEEEEEEEECCCCcEEeccCc--cCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEE
Confidence 457999999999995 89999999999999998 5999998753 568999999999 999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCcEEEEEEEEEeeeccc---ccCCChHHHHHHH
Q 008251 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKE---SWDMNTEEKIEAA 399 (572)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~~~---~~~~~~~e~~~~a 399 (572)
.|+|.++||..+... ...||+++++.|+|+|+++....+ .|+|+.++++..|
T Consensus 125 ~iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 125 HVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 999999999877531 246999999999999999998777 8999999998876
No 39
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.82 E-value=1.7e-19 Score=155.82 Aligned_cols=110 Identities=39% Similarity=0.613 Sum_probs=101.8
Q ss_pred CCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEEE
Q 008251 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (572)
Q Consensus 268 ~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~ 347 (572)
.|+++.++++++|+|...|..|+.|+|||++++.||++|+++. ....|+.|.+|.+.+|+||+.+|..|++||++.|.
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ 94 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSH--DRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLL 94 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHH--HHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecC--CCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEE
Confidence 6889999999999997789999999999999999999999864 24679999999999999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCCcEEEEEEEEEee
Q 008251 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (572)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~ 382 (572)
|+|.++||..+.. ..||++++|.|+|+|+++.
T Consensus 95 ip~~~aYG~~g~~---~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 95 CKPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp ECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred EChHHcCCCCCCC---CCcCCCCEEEEEEEEEEec
Confidence 9999999998764 4799999999999999885
No 40
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.82 E-value=2.7e-19 Score=152.90 Aligned_cols=112 Identities=40% Similarity=0.627 Sum_probs=99.7
Q ss_pred CcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCC-----CCcccEEEEcCCcchhhHHHHHHhccCCCcE
Q 008251 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHS-----EEEQLFEFKTDEEQVIDGLDRAVITMKKNEV 343 (572)
Q Consensus 269 d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~-----~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~ 343 (572)
..++.|+|+++|+|...|..|+.|+|||.+++.||++|+++... ....|+.|.+|.+.+|+||+.+|..|++||+
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCE
Confidence 45799999999999778999999999999999999999987531 1248999999999999999999999999999
Q ss_pred EEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEee
Q 008251 344 ALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (572)
Q Consensus 344 ~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~ 382 (572)
+.|.|+|.++||..+... ..||++++|.|+|+|+++.
T Consensus 83 ~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 83 ARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEEC
T ss_pred EEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEeC
Confidence 999999999999987643 3699999999999999863
No 41
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.81 E-value=1e-18 Score=163.39 Aligned_cols=178 Identities=32% Similarity=0.484 Sum_probs=139.8
Q ss_pred EEEEEEEeeecccccCCChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChH-HHHHHHHHHHHhHh
Q 008251 374 YEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVACNL 452 (572)
Q Consensus 374 f~IeLl~~~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e-~~~~~~~~~~~~~~ 452 (572)
....+..+.+.++.|.++.+++...+..++..|+.++..|+|.+|+..|.+++.+.+........ .......+...+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (198)
T 2fbn_A 13 GRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNL 92 (198)
T ss_dssp ---------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Confidence 34456788889999999999999999999999999999999999999999999998876544332 23334555678899
Q ss_pred hHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 008251 453 NNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEY 532 (572)
Q Consensus 453 nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~ 532 (572)
|+|.||+++++|++|+.+|+++++++|++.++++++|.+|..++++++|+.+|+++++++|++..+...+..+...+.+.
T Consensus 93 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 93 NLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCCC
Q 008251 533 NKKEAKFYGNMFAKMSMFG 551 (572)
Q Consensus 533 ~~~~~~~~~~~f~~~~~~~ 551 (572)
.+.++..|++||.+...+.
T Consensus 173 ~~~~~~~~~~~f~~~~~~~ 191 (198)
T 2fbn_A 173 RKKDKLTFGGMFDKGPLYE 191 (198)
T ss_dssp HC-----------------
T ss_pred HHHHHHHHHHHhcccchhh
Confidence 9999999999998766554
No 42
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.80 E-value=7e-19 Score=152.24 Aligned_cols=114 Identities=31% Similarity=0.492 Sum_probs=107.4
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
+.|+.++++|+.+|+.|+|++|+..|++|+++.|.+. .+++|+|.||+++++|++|+.+|+++++
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENA---------------ILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999987643 3588999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
++|+++++|+++|.+|..+|++++|+.+|+++++++|+|.+++..++.|
T Consensus 76 ~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999998888766
No 43
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.78 E-value=8.8e-19 Score=155.48 Aligned_cols=110 Identities=27% Similarity=0.409 Sum_probs=99.4
Q ss_pred cccccceEEEEeecCccc-CCCCCCCeEEEEEEEEeCCCeEeeeccceEEEeCCCCCcchHHHHHhhccCCcEEEEEecC
Q 008251 149 ICKDGGIIKKILKEGEKW-ENPKDLDEVLVNYEARLEDGMVVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKP 227 (572)
Q Consensus 149 ~~~d~~v~k~i~~~g~g~-~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~ 227 (572)
+..++.+.++++++|.|. ..+..||.|++||++++.+|++|++++|+.|.+|.+++++||+++|.+|++|++++|+|||
T Consensus 39 ~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~IP~ 118 (157)
T 2jwx_A 39 ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADS 118 (157)
T ss_dssp SSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEEEEEEEETTTTSSCHHHHHHTTTSCTTCEEEEEECG
T ss_pred ECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEECc
Confidence 345555679999999983 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCC-CCCCCCCCCCCCCCeEEEEEEEecccce
Q 008251 228 QYGFGEKG-KSASGNEGAVPPNATLQIALELVSWKTV 263 (572)
Q Consensus 228 ~~~~g~~~-~~~~~~~~~ip~~~~l~~~v~l~~~~~~ 263 (572)
+++||+.+ .+ +.||||++|+|+|+|+++...
T Consensus 119 ~~aYG~~g~~~-----~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 119 KYCYGPQGSRS-----PYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp GGTTTTTCCSS-----SCCCTTCCEEEEEEEEEEEEC
T ss_pred hhcCCcccccC-----CCcCCCCeEEEEEEEEEEEcc
Confidence 99999987 42 579999999999999998653
No 44
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.78 E-value=3.9e-19 Score=154.68 Aligned_cols=115 Identities=29% Similarity=0.497 Sum_probs=97.7
Q ss_pred ceeeeeCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEec-CCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCC
Q 008251 262 TVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (572)
Q Consensus 262 ~~~d~~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~-~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~ 340 (572)
.+.|++.+.++.++++++|+|. .+..|+.|+|||.+++. +|++|+++.. ...|++|.+|.+.+|+||+.+|..|++
T Consensus 18 ~~~~v~~~~gl~~~vl~~G~g~-~~~~gd~V~v~Y~g~l~~~G~~fdss~~--~~~p~~f~lG~g~~i~G~e~aL~gm~~ 94 (134)
T 3b7x_A 18 RMLDISGDRGVLKDVIREGAGD-LVAPDASVLVKYSGYLEHMDRPFDSNYF--RKTPRLMKLGEDITLWGMELGLLSMRR 94 (134)
T ss_dssp TCEESSSSSSEEEEEEECCEEE-ECCTTCEEEEEEEEECTTCSSCSEEC---------CEEC-CCCCCHHHHHHHHTCEE
T ss_pred ccceeeCCCCEEEEEEEcCCCC-CCCCCCEEEEEEEEEECCCCeEEEecCC--CCCCEEEEcCCcchhHHHHHHHhCCCC
Confidence 4578888999999999999995 57789999999999998 6999998652 467999999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEee
Q 008251 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (572)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~ 382 (572)
||++.|.|+|+++||..+.. ..||+++++.|+|+|+++.
T Consensus 95 Ge~~~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 95 GELARFLFKPNYAYGTLGCP---PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEEECHHHCcCCCCCC---CCcCcCCeEEEEEEEEEEe
Confidence 99999999999999987754 3599999999999999875
No 45
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.78 E-value=2.5e-18 Score=146.40 Aligned_cols=112 Identities=29% Similarity=0.410 Sum_probs=101.8
Q ss_pred ceeeeeCCcceEEEEEeCCCCc-CCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCC
Q 008251 262 TVSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (572)
Q Consensus 262 ~~~d~~~d~~~~k~il~~G~g~-~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~ 340 (572)
.+.++++++++.++++++|+|. ..|..|+.|+|||.+++.||++|++ ..|++|.+|.+.+++||+.+|..|++
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds------~~p~~f~lG~~~~i~g~e~~l~gm~~ 78 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDV 78 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEE------EEEEEEETTSSCSCHHHHHHGGGSCT
T ss_pred cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEEC------CCCEEEEECCCChhHHHHHHHhCCCC
Confidence 4567889999999999999985 3799999999999999999999986 36899999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEee
Q 008251 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (572)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~ 382 (572)
||++.|.++|+++||..+.. ..||+++++.|+|+|+++.
T Consensus 79 Ge~~~~~ip~~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 79 GETAMVTADSKYCYGPQGRS---PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCC---CccCCCCeEEEEEEEEEec
Confidence 99999999999999987754 3699999999999999875
No 46
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=6.3e-19 Score=156.25 Aligned_cols=138 Identities=16% Similarity=0.141 Sum_probs=119.5
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
....|..++..|+.+|+.|+|++|+..|++|+++.|..+... ..........+|+|+|.|+.++++|++|+.+|++|
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kA 83 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKA 83 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 356788999999999999999999999999999999854321 01112234458999999999999999999999999
Q ss_pred Hhc-------CCCCHHHH----HHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 475 LDL-------DSRNVKAL----YRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 475 l~~-------~p~~~ka~----~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
|++ +|++.++| ||+|.++..+|++++|+.+|++|++++|++..+...+..+++.+.+..++
T Consensus 84 L~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 84 LHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999 99999999 99999999999999999999999999999999988988887777655543
No 47
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.78 E-value=3.1e-18 Score=148.33 Aligned_cols=115 Identities=38% Similarity=0.633 Sum_probs=101.9
Q ss_pred eeeeCCcceEEEEEeCC-CC-cCCCCCCCEEEEEEEEEe-cCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCC
Q 008251 264 SEITDDKKVIKKILKEG-DG-FERPNEGAVVKVKLIGKL-QDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (572)
Q Consensus 264 ~d~~~d~~~~k~il~~G-~g-~~~p~~~~~v~v~~~~~l-~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~ 340 (572)
.+.+.++.++++++++| .| ...|..|+.|+|||.+++ .||++|+++.. ...|++|.+|.+.+++||+.+|.+|++
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~--~~~p~~f~lG~g~~i~g~e~~l~gm~~ 87 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFD--RNVPFKFHLEQGEVIKGWDICVSSMRK 87 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGG--TTCCEEEETTSSSSCHHHHHHHTTCCT
T ss_pred cEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCC--CCccEEEEeCCCCcCHHHHHHHhCCCC
Confidence 34567888999999988 55 367999999999999999 79999998752 468999999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEeee
Q 008251 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (572)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~ 383 (572)
||++.|.|+|.++||..+.. ..||+++++.|+|+|+++..
T Consensus 88 Ge~~~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 88 NEKCLVRIESMYGYGDEGCG---ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred CCEEEEEEChHHcCCCCCCC---CCcCCCCeEEEEEEEEEEec
Confidence 99999999999999987754 35999999999999999864
No 48
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.78 E-value=3.7e-18 Score=144.29 Aligned_cols=108 Identities=31% Similarity=0.500 Sum_probs=97.8
Q ss_pred CcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEEEE
Q 008251 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTI 348 (572)
Q Consensus 269 d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~i 348 (572)
+.++.++++++|+|...|..|+.|+|||.+++.||++|+++.. .+.|++|.+|.+.+++||+.+|..|++||++.|.+
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVD--RGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTT--TTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCC--CCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 4579999999999965599999999999999999999998752 45799999999999999999999999999999999
Q ss_pred cCCCccCCccccccccCCCCCCcEEEEEEEEEe
Q 008251 349 APEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (572)
Q Consensus 349 ~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~ 381 (572)
+|.++||..+.. ..||+++++.|+|+|+++
T Consensus 83 p~~~ayG~~~~~---~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 83 PGPYAYGPRGFP---GLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp CGGGTTTTTCBT---TTBCTTCCEEEEEEEEEE
T ss_pred CHHHCcCCCCCC---CCcCCCCeEEEEEEEEEe
Confidence 999999987754 359999999999999876
No 49
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.78 E-value=2.2e-18 Score=144.24 Aligned_cols=106 Identities=31% Similarity=0.591 Sum_probs=96.0
Q ss_pred ceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEEEEcC
Q 008251 271 KVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAP 350 (572)
Q Consensus 271 ~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~i~~ 350 (572)
++.++++++|+|...|..|+.|+|||.+++.||++|+++.. .+.|++|.+|.+.+++||+.+|..|++||++.|.++|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRD--RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHH--HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCC--CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECH
Confidence 57899999999965699999999999999999999998742 3579999999999999999999999999999999999
Q ss_pred CCccCCccccccccCCCCCCcEEEEEEEEEe
Q 008251 351 EYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (572)
Q Consensus 351 ~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~ 381 (572)
.++||..+.. ..||+++++.|+|+|+++
T Consensus 79 ~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 79 DYAYGATGHP---GIIPPHATLVFDVELLKL 106 (107)
T ss_dssp GGTTTTTCBT---TTBCTTCCEEEEEEEEEE
T ss_pred HHccCCCCCC---CCcCCCCeEEEEEEEEEe
Confidence 9999987754 369999999999999876
No 50
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.77 E-value=3.5e-18 Score=147.15 Aligned_cols=114 Identities=21% Similarity=0.367 Sum_probs=100.9
Q ss_pred eCCcceEEEEEeCCCC-cCCCCCCCEEEEEEEEEec-CCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEE
Q 008251 267 TDDKKVIKKILKEGDG-FERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVA 344 (572)
Q Consensus 267 ~~d~~~~k~il~~G~g-~~~p~~~~~v~v~~~~~l~-~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~ 344 (572)
+.+.++.++++++|.+ ...|..|+.|+|||++++. ||++|+++.......|+.|.+|.+.+|+||+.+|..|++||++
T Consensus 9 ~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~ 88 (125)
T 4dip_A 9 IPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKR 88 (125)
T ss_dssp CCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEE
T ss_pred ECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 4577899999999983 3689999999999999998 9999998742123689999999999999999999999999999
Q ss_pred EEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEeeec
Q 008251 345 LLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKE 384 (572)
Q Consensus 345 ~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~ 384 (572)
.|.++|.++||..+. ..||++++|.|+|+|+++.+.
T Consensus 89 ~~~ip~~~aYG~~g~----~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 89 KLIIPPALGYGKEGK----GKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp EEEECGGGTTTTTCB----TTBCTTCCEEEEEEEEEEECC
T ss_pred EEEEChHHhcCCCCC----CCCCCCCeEEEEEEEEEEEcC
Confidence 999999999998874 369999999999999998754
No 51
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.76 E-value=4.2e-18 Score=147.17 Aligned_cols=105 Identities=29% Similarity=0.479 Sum_probs=94.3
Q ss_pred cccceEEE--EeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEeCCCCCcchHHHHHhhccCCcEEEEE
Q 008251 151 KDGGIIKK--ILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLA 224 (572)
Q Consensus 151 ~d~~v~k~--i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ 224 (572)
.+.++.++ ++++|+|...+..||.|+++|++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus 20 ~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ 99 (130)
T 2lgo_A 20 GSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFT 99 (130)
T ss_dssp SSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEE
T ss_pred CCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 34555555 9999999655999999999999999999999987 58999999999999999999999999999999
Q ss_pred ecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecc
Q 008251 225 VKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSW 260 (572)
Q Consensus 225 vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 260 (572)
|||+++||+.+.+ +.|||+++|+|+|+|+++
T Consensus 100 ip~~~aYG~~~~~-----~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 100 IPYQLAYGERGYP-----PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp ECTTTSTTTTCCS-----TTSCSSCCEEEEEEEEEC
T ss_pred ECcHHHCCCCCCC-----CCcCCCCeEEEEEEEEEC
Confidence 9999999988764 469999999999999874
No 52
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.76 E-value=5e-19 Score=158.13 Aligned_cols=132 Identities=22% Similarity=0.332 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCCC
Q 008251 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (572)
Q Consensus 52 ~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (572)
.++.||.|.|||++++.||++|++|+..++|+.|.+|.+++||||++||.||++|++++|.|||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~-------- 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS-------- 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC--------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC--------
Confidence 689999999999999999999999987568999999999999999999999999999999999999999877
Q ss_pred CcEEEEEEEeEeeeccccccccceEEEEeecCc---ccCCCCCCCeEEEEEEEEeCCCeEeeec
Q 008251 132 ATLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKA 192 (572)
Q Consensus 132 ~~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (572)
..++..+..-.|...... ..+..+..-...|. +...--.++.|++|+||+|++.++.+.-
T Consensus 96 ~~lv~~vp~~~f~~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~v 158 (169)
T 4dt4_A 96 PDLIQYFSRREFMDAGEP-EIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDI 158 (169)
T ss_dssp GGGEEEEEGGGGTTTCCC-CTTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTTCCEEEEE
T ss_pred hHHEEEeCHHHCCCcCCC-CCCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCCCEEEEEE
Confidence 456666665555421111 11111111111111 1112224589999999999999887753
No 53
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.76 E-value=3.1e-18 Score=151.54 Aligned_cols=131 Identities=18% Similarity=0.248 Sum_probs=99.2
Q ss_pred CCCCCCCEEEEEEEEEec-CCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCC
Q 008251 51 DTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIP 129 (572)
Q Consensus 51 ~~~~~gd~V~v~y~~~~~-~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip 129 (572)
..++.||.|++||++++. ||++|++|+.. .|+.|.+|.++++|||++||.||++|++++|.|||++|||+++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~------ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE------ 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC------
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC------
Confidence 568899999999999988 99999999863 7999999999999999999999999999999999999999876
Q ss_pred CCCcEEEEEEEeEeeeccccccccceEEEEeecCc---ccCCCCCCCeEEEEEEEEeCCCeEeeec
Q 008251 130 PNATLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKA 192 (572)
Q Consensus 130 ~~~~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (572)
..+++.+....|. .... ..+..+..-...|. +...--.++.|++||||+|+|.++.+.-
T Consensus 78 --~~~v~~v~~~~f~-~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v 139 (151)
T 2kr7_A 78 --SSYLQEVPRDQFE-GIEL-EKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRF 139 (151)
T ss_dssp --SCEEEEEEGGGGT-TSCC-CTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEEEEE
T ss_pred --cceEEEEcHHHcC-CCCC-ccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEEEEE
Confidence 5677777776661 1111 11111111111111 1122224589999999999999987764
No 54
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.76 E-value=8.2e-18 Score=151.01 Aligned_cols=122 Identities=25% Similarity=0.405 Sum_probs=104.5
Q ss_pred eCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEE
Q 008251 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (572)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v 346 (572)
+-+.++.++++++|+|...|..|+.|+|||.+++.||++|+++.. ++.|++|.+ +.+|+||+.+|.+|++||++.|
T Consensus 34 ~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~ 109 (167)
T 1jvw_A 34 KLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRE--RGKPTTFRP--NEVIKGWTEALQLMREGDRWRL 109 (167)
T ss_dssp ECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHH--HTSCEEECG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred ECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccc--cCCCEEEEe--CchhHHHHHHHcCCCCCCEEEE
Confidence 346679999999999954499999999999999999999998752 457999998 4899999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCcEEEEEEEEEeeecccccCCChHHHHH
Q 008251 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIE 397 (572)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~~~~~~~~~~e~~~ 397 (572)
.|||.++||..+.. ..||++++|.|+|+|+++.+. .+.++.++..+
T Consensus 110 ~Ip~~laYG~~g~~---~~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~~~ 155 (167)
T 1jvw_A 110 FIPYDLAYGVTGGG---GMIPPYSPLEFDVELISIKDG--GKGRTAEEVDE 155 (167)
T ss_dssp EECGGGTTTTTCSS---SSSCTTCCEEEEEEEEEEGGG--CCSCBHHHHHH
T ss_pred EECchhhCCCCCCC---CCcCCCCeEEEEEEEEEEEcC--CCCCCHHHHHH
Confidence 99999999988754 369999999999999999853 45566666443
No 55
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3.2e-18 Score=149.09 Aligned_cols=122 Identities=28% Similarity=0.367 Sum_probs=106.2
Q ss_pred ceeeeeCCcceEEEEEeCCCCc-CCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCC
Q 008251 262 TVSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (572)
Q Consensus 262 ~~~d~~~d~~~~k~il~~G~g~-~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~ 340 (572)
.+.++++++++.++++++|+|. ..|..|+.|+|||.+++.||++|++ ..|+.|.+|.+.+|+||+.+|..|++
T Consensus 9 ~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds------~~p~~f~lG~g~~i~G~e~~L~gm~~ 82 (135)
T 2d9f_A 9 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDV 82 (135)
T ss_dssp SCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE------EEEEEEETTSCCSCTTTTTTGGGSCT
T ss_pred cCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec------CCCEEEEeCCCChhHHHHHHHhCCCC
Confidence 3467788999999999999984 4799999999999999999999986 36899999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEeeecccccCCC
Q 008251 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMN 391 (572)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~~~~~~~~~ 391 (572)
||++.|.++|.++||..+... ..||+++++.|+|+|+++....+.-.++
T Consensus 83 Ge~~~v~ip~~~aYG~~~~~~--~~Ip~~~~l~f~vel~~v~~~~~~e~~s 131 (135)
T 2d9f_A 83 GETAMVTADSKYCYGPQGSRS--PYIPPHAALCLEVTLKTAVDRPDLEMSG 131 (135)
T ss_dssp TCEEEEEECHHHHTCTTCCSS--SCCCTTCCEEEEEEEEEEESSCSSSSCC
T ss_pred CCEEEEEEChhHccCcCCcCC--CccCCCCeEEEEEEEEEeecCCchhhcC
Confidence 999999999999999876222 3689999999999999998755543333
No 56
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.76 E-value=3.7e-18 Score=158.93 Aligned_cols=105 Identities=23% Similarity=0.367 Sum_probs=96.5
Q ss_pred cccccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec-cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecC
Q 008251 149 ICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA-DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKP 227 (572)
Q Consensus 149 ~~~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~-~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~ 227 (572)
.+.+.++.++++++|+| ..|..+|.|+|||++++.+|++|+++ .|+.|.+| ++++||+++|.+|++|++++|+|||
T Consensus 113 ~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IPp 189 (219)
T 3oe2_A 113 KELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQSTQPQWFRLD--SVISGWTSALQNMPTGAKWRLVIPS 189 (219)
T ss_dssp EECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEECSSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred EECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeeccCCcEEEEec--chhHHHHHHHhCCCCCCEEEEEECc
Confidence 34678899999999999 68999999999999999999999987 78888887 8999999999999999999999999
Q ss_pred CCccCCCCCCCCCCCCCCCCCCeEEEEEEEeccc
Q 008251 228 QYGFGEKGKSASGNEGAVPPNATLQIALELVSWK 261 (572)
Q Consensus 228 ~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (572)
++|||+.|.+ +.|||+++|+|+|+|+++.
T Consensus 190 ~lAYG~~g~~-----~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 190 DQAYGAEGAG-----DLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GGTTTTTCBT-----TTBCTTCCEEEEEEEEEEE
T ss_pred hhcCCCCCCC-----CCCCCCCeEEEEEEEEEEe
Confidence 9999999874 4699999999999999874
No 57
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.75 E-value=1.2e-17 Score=144.77 Aligned_cols=109 Identities=34% Similarity=0.530 Sum_probs=98.4
Q ss_pred eCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEE
Q 008251 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (572)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v 346 (572)
..+.++.++++++|+| ..|..|+.|+|||.+++.||++|+++.. ...|++|.+|.+.+|+||+.+|..|++||++.|
T Consensus 25 ~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~--~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 25 TTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKD--RNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp ECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTT--TTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred ECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCc--CCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 4567899999999999 5799999999999999999999998752 468999999999999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCcEEEEEEEEEe
Q 008251 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (572)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~ 381 (572)
.++|.++||..+.. ..|||++++.|+|+|+++
T Consensus 102 ~ip~~~aYG~~~~~---~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 TIPPQLGYGARGAG---GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCC---CCCCCCCeEEEEEEEEEC
Confidence 99999999987654 369999999999999864
No 58
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.75 E-value=7.5e-19 Score=164.75 Aligned_cols=168 Identities=24% Similarity=0.315 Sum_probs=113.6
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCC-------------CCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCcc
Q 008251 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (572)
Q Consensus 53 ~~~gd~V~v~y~~~~~~g~~~~~t~~~-------------~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ay 119 (572)
++.||.|.|||++++ ||++|++|+.. +.|+.|.+|.|+++|||++||.||++|++++|+|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcEEEEEEEeEeeecccccc-ccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeeccceEEE
Q 008251 120 GESGSPPTIPPNATLQFDVELLSWTSVKDICK-DGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADGVEFT 198 (572)
Q Consensus 120 g~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~-d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~ 198 (572)
|.++ ..++..+..-.|... ++.. .|..+. . ....|...--.++.|++|+||+|+|.++.+.-+-..+.
T Consensus 81 Ge~~--------~~lv~~vp~~~f~~~-~~~~~vG~~~~-~-~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~ 149 (231)
T 3prb_A 81 GKRD--------PSKIKLIPLSEFTKR-GIKPIKGLTIT-I-DGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVV 149 (231)
T ss_dssp CCCC--------GGGEEEEETHHHHTT-TCCCCTTCEEE-E-TTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEC
T ss_pred CCCC--------hHHEEecCHHHCCcc-cCCCCCCcEEE-e-cCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEe
Confidence 9887 445555554444321 1111 111111 0 00012222234589999999999999988765333332
Q ss_pred eCCCCCcchHHHHHh----hcc---CCcEEEEEecCCCccC
Q 008251 199 VKDGHFCPTLAKAVK----TMK---KGEKVLLAVKPQYGFG 232 (572)
Q Consensus 199 ~g~~~~~~gl~~~l~----~m~---~Ge~~~i~vp~~~~~g 232 (572)
-...+-+.+|-.-.. .|. .++++.|.+|+.+.|-
T Consensus 150 eat~eei~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~ 190 (231)
T 3prb_A 150 DDKKNIVKEIVKMYVPRLSDVKVTIRNGTVKIELPEFAPFI 190 (231)
T ss_dssp CSHHHHHHHHHHHHCTTCCCCEEEEETTEEEEECCTTGGGS
T ss_pred cCCHHHHHHHHHHhcCCccceEEEEeCCeEEEEcCHHHhhh
Confidence 222222222222222 122 4678899999987653
No 59
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.75 E-value=7.8e-19 Score=155.47 Aligned_cols=129 Identities=27% Similarity=0.392 Sum_probs=96.5
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCC-------------CCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCcc
Q 008251 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (572)
Q Consensus 53 ~~~gd~V~v~y~~~~~~g~~~~~t~~~-------------~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ay 119 (572)
++.||.|+|||++++ ||++|++|+.. +.|+.|.+|.++++|||++||.||++|++++|+|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcEEEEEEEeEeeecccccc-ccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeecc
Q 008251 120 GESGSPPTIPPNATLQFDVELLSWTSVKDICK-DGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (572)
Q Consensus 120 g~~~~~~~ip~~~~l~~~v~l~~~~~~~~~~~-d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~ 193 (572)
|+++ ..++..+....|... ++.. .+..+. . ....|...--.++.|++|+||+|++.++.++-+
T Consensus 81 G~~~--------~~~V~~v~~~~f~~~-~~~~~~G~~~~-~-~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~v~ 144 (157)
T 3pr9_A 81 GKRD--------PSKIKLIPLSEFTKR-GIKPIKGLTIT-I-DGIPGKIVSINSGRVLVDFNHELAGKEVKYRIK 144 (157)
T ss_dssp CCCC--------GGGEEEEEHHHHHHT-TCCCCTTCEEE-E-TTEEEEEEEEETTEEEEECSCTTTTCCEEEEEE
T ss_pred CCCC--------hHhEEEcCHHHCCcc-cCCcCCCcEEE-e-cCCCeEEEEEcCCEEEEECCCccCCCeEEEEEE
Confidence 9887 455666655444321 1111 111111 1 000122223345899999999999999877643
No 60
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.74 E-value=2.3e-17 Score=169.96 Aligned_cols=155 Identities=35% Similarity=0.599 Sum_probs=135.5
Q ss_pred ChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccC-CCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHH
Q 008251 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK 469 (572)
Q Consensus 391 ~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~-~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~ 469 (572)
+.++.+..+..++..|+.+++.|+|++|+..|++|+++.+... ....++..........+++|+|.||+++++|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 5788899999999999999999999999999999999766531 111233334566778889999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008251 470 LCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (572)
Q Consensus 470 ~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~ 545 (572)
+|++||+++|+++++|+++|.+|..++++++|+.+|++|++++|++..+...+..+...+++.+++++.+|++||+
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999984
No 61
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.74 E-value=3.4e-17 Score=153.00 Aligned_cols=122 Identities=30% Similarity=0.457 Sum_probs=104.8
Q ss_pred EEEEecccceeeeeCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHH
Q 008251 254 ALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDR 333 (572)
Q Consensus 254 ~v~l~~~~~~~d~~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~ 333 (572)
++-+.+..-....+.+.++.++++++|+|. .|..|+.|+|||++++.||++|+++. ..+.|+.|.+|.+.+++||+.
T Consensus 88 ~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G~-~~~~gd~V~v~Y~g~l~dG~~fdss~--~~~~P~~f~lG~g~vi~G~ee 164 (209)
T 3uf8_A 88 EAHREQIGGSTVVTTESGLKYEDLTEGSGA-EARAGQTVSVHYTGWLTDGQKFDSSK--DRNDPFAFVLGGGMVIKGWDE 164 (209)
T ss_dssp EEECSCTTCCCCEECTTSCEEEEEECCCSC-BCCTTCEEEEEEEEEETTSCEEEESG--GGTCCEEEETTSSSSCHHHHH
T ss_pred hhhccccccccccCCCCceEEEEEEcCCCC-cCCCCCEEEEEEEEEECCCCEEEEcc--ccCCCEEEEeCCCccchhHHH
Confidence 344444333334456788999999999995 59999999999999999999999875 357899999999999999999
Q ss_pred HHhccCCCcEEEEEEcCCCccCCccccccccCCCCCCcEEEEEEEEEe
Q 008251 334 AVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (572)
Q Consensus 334 ~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~ 381 (572)
+|.+|++||++.|.+||.++||..+.. ..||++++|.|+|+|+++
T Consensus 165 aL~gM~~Ge~~~v~Ipp~~aYG~~g~~---~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 165 GVQGMKVGGVRRLTIPPQLGYGARGAA---GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp HHTTCBTTCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred HHhCCCCCCEEEEEECcHHhCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 999999999999999999999998764 359999999999999864
No 62
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.73 E-value=6.1e-19 Score=156.07 Aligned_cols=123 Identities=25% Similarity=0.460 Sum_probs=95.4
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCC-------------CCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCcc
Q 008251 53 PENGDEVEVHYTGTLLDGTQFDSSRD-------------RSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (572)
Q Consensus 53 ~~~gd~V~v~y~~~~~~g~~~~~t~~-------------~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ay 119 (572)
++.||.|.|||++++.||++|++|+. ...|+.|.+|.++++|||++||.||++|++++|+|||++||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 67899999999999889999999963 23799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcEEEEEEEeEeeec-cccccccc------eEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec
Q 008251 120 GESGSPPTIPPNATLQFDVELLSWTSV-KDICKDGG------IIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA 192 (572)
Q Consensus 120 g~~~~~~~ip~~~~l~~~v~l~~~~~~-~~~~~d~~------v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (572)
|+++ ..+++.+.+..|... ... ..+. ....+.+. .++.|++||||+++|.++.++-
T Consensus 82 G~~~--------~~~v~~v~~~~f~~~~~~~-~~G~~~~~~~~~~~V~~v--------~~~~v~vD~NHPLAG~~L~F~v 144 (151)
T 1ix5_A 82 GNRN--------EMLIQKIPRDAFKEADFEP-EEGMVILAEGIPATITEV--------TDNEVTLDFNHELAGKDLVFTI 144 (151)
T ss_dssp CSCC--------STTBCCEETHHHHTSTTCC-CTTEEEESSSCEEEEEEE--------ETTEEEEECCCSSTTCCEEEEC
T ss_pred CCCC--------ccEEEEEEHHHcCccCCcc-cccCEEEECCeEEEEEEE--------cCCEEEEeCCCCCCCCeEEEEE
Confidence 9876 445666666555320 111 1111 11222222 3489999999999999987753
No 63
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.73 E-value=9.5e-18 Score=145.07 Aligned_cols=110 Identities=19% Similarity=0.342 Sum_probs=97.1
Q ss_pred ccccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEeCCCCCcchHHHHHhh------ccCCc
Q 008251 150 CKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKT------MKKGE 219 (572)
Q Consensus 150 ~~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~------m~~Ge 219 (572)
..+.++.++++.+|.| ..+..||.|++||++++.+|++|+++ +|+.|.+|.+++++||+++|.+ |++|+
T Consensus 9 ~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 9 VSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp ECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred ECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 3567889999999998 67999999999999999999999986 6899999999999999999998 99999
Q ss_pred EEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEEecc
Q 008251 220 KVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSW 260 (572)
Q Consensus 220 ~~~i~vp~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 260 (572)
+++|.|||+++||+.+.+.....+.||||++|+|+|+|+++
T Consensus 88 ~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 88 KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999998875211122469999999999999875
No 64
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.73 E-value=6.8e-18 Score=154.79 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=97.7
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCCC
Q 008251 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (572)
Q Consensus 52 ~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (572)
.++.||.|+|+|++++.||++|++|+.. +|+.|.+|.+++||||+++|.+|++|++++|+|||++|||+++
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~-------- 72 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD-------- 72 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC--------
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC--------
Confidence 3689999999999998899999999864 8999999999999999999999999999999999999999876
Q ss_pred CcEEEEEEEeEeeeccccccccceEEEEeecC--cccCCCCCCCeEEEEEEEEeCCCeEeeec
Q 008251 132 ATLQFDVELLSWTSVKDICKDGGIIKKILKEG--EKWENPKDLDEVLVNYEARLEDGMVVGKA 192 (572)
Q Consensus 132 ~~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g--~g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (572)
..+++.|....|.....+ ..+..+......| .+..+--.++.|+|+|||+|++.++.++.
T Consensus 73 ~~lV~~vp~~~f~~~~~~-~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~v 134 (196)
T 2kfw_A 73 ENLVQRVPKDVFMGVDEL-QVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNV 134 (196)
T ss_dssp TTTCEEECGGGCCCSSCC-CTTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEEE
T ss_pred hhhEEEEEHHHCCCccCc-ccCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEE
Confidence 345555555545321111 1122221111111 11233345689999999999999887653
No 65
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.72 E-value=2.1e-17 Score=148.66 Aligned_cols=125 Identities=19% Similarity=0.260 Sum_probs=96.9
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCCC
Q 008251 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (572)
Q Consensus 52 ~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (572)
.++.||.|+|+|++++.||++|++|+.. +|+.|.+|.++++|||++||.||++|++++|.|||++|||+++
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~-------- 72 (171)
T 2k8i_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD-------- 72 (171)
T ss_dssp CCCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC--------
T ss_pred cCCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC--------
Confidence 3678999999999998899999999864 7999999999999999999999999999999999999999886
Q ss_pred CcEEEEEEEeEeeeccccc---------cccceEEEEeecCcccCCCCCCCeEEEEEEEEeCCCeEeeecc
Q 008251 132 ATLQFDVELLSWTSVKDIC---------KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (572)
Q Consensus 132 ~~l~~~v~l~~~~~~~~~~---------~d~~v~k~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~ 193 (572)
..+++.|....|.....+. .++.+..++++. .++.|+++|||+|++.++.++-+
T Consensus 73 ~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v--------~~~~V~vD~NHPLAGk~L~F~ve 135 (171)
T 2k8i_A 73 ENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAV--------EDDHVVVDGNHMLAGQNLKFNVE 135 (171)
T ss_dssp TTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEE--------CSSEEEEESCCSSCCCEEEEEEE
T ss_pred hhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEE--------cCCEEEEeCCCCCCCCeEEEEEE
Confidence 3455666555553211111 111111122222 34899999999999999887653
No 66
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.70 E-value=1.5e-16 Score=148.43 Aligned_cols=109 Identities=26% Similarity=0.430 Sum_probs=97.5
Q ss_pred eCCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEE
Q 008251 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (572)
Q Consensus 267 ~~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v 346 (572)
+.+.++.++++++|+| ..|..|+.|+|||.+++.||++||++.. ++.|++|.+ +.+|+||+.+|..|++||++.|
T Consensus 103 ~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v 177 (213)
T 1fd9_A 103 VLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEK--TGKPATFQV--SQVIPGWTEALQLMPAGSTWEI 177 (213)
T ss_dssp ECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHH--HCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred ECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccc--cCCCEEEEc--CchhhHHHHHHcCCCCCCEEEE
Confidence 3466899999999999 5799999999999999999999998752 467999999 4799999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCCcEEEEEEEEEeee
Q 008251 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (572)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~~~ 383 (572)
.|||.++||..+.. ..||++++++|+|+|+++.+
T Consensus 178 ~IP~~laYG~~g~~---~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 178 YVPSGLAYGPRSVG---GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EECGGGTTTTCCCS---SSCCTTCCEEEEEEEEEEEC
T ss_pred EECchhccCccCCC---CCCCCCCeEEEEEEEEEEEc
Confidence 99999999987753 36999999999999999874
No 67
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.69 E-value=7.8e-17 Score=133.48 Aligned_cols=91 Identities=25% Similarity=0.445 Sum_probs=84.4
Q ss_pred CCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCC
Q 008251 167 ENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNE 242 (572)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~ 242 (572)
..+..||.|++||++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.|||+++||+.+.+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~----- 78 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP----- 78 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT-----
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC-----
Confidence 56889999999999999999999986 689999999999999999999999999999999999999988763
Q ss_pred CCCCCCCeEEEEEEEecccc
Q 008251 243 GAVPPNATLQIALELVSWKT 262 (572)
Q Consensus 243 ~~ip~~~~l~~~v~l~~~~~ 262 (572)
+.|||+++|+|+|+|+++..
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIER 98 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGG
T ss_pred CCcCcCCeEEEEEEEEEecc
Confidence 47999999999999999865
No 68
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.67 E-value=6.2e-16 Score=145.19 Aligned_cols=105 Identities=30% Similarity=0.536 Sum_probs=94.8
Q ss_pred CCcceEEEEEeCCCCcCCCCCCCEEEEEEEEEecCCcEEEecCCCCCcccEEEEcCCcchhhHHHHHHhccCCCcEEEEE
Q 008251 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (572)
Q Consensus 268 ~d~~~~k~il~~G~g~~~p~~~~~v~v~~~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~ 347 (572)
.+.++.++++++|+| ..|..|+.|+|||.+++.||++|+++.. ++.|++|.+ +.+|+||+.+|.+|++||++.|.
T Consensus 119 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYT--RGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp CTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGG--GTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEE
T ss_pred CCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccc--cCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEE
Confidence 356799999999999 5799999999999999999999998753 468999999 48999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCCcEEEEEEEEEe
Q 008251 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (572)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~IeLl~~ 381 (572)
|||.++||..+.. .||++++++|+|+|+++
T Consensus 194 IP~~laYG~~g~~----~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 194 IPPELAYGKAGVP----GIPPNSTLVFDVELLDV 223 (224)
T ss_dssp ECGGGTTTTTCBT----TBCTTCCEEEEEEEEEE
T ss_pred ECchhhcCcCCCC----CCCCCCEEEEEEEEEEe
Confidence 9999999987653 39999999999999886
No 69
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.66 E-value=4.8e-16 Score=134.43 Aligned_cols=115 Identities=24% Similarity=0.355 Sum_probs=100.7
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
..+.|..+++.|+.+|++|+|++|+..|++|+++.|.+. .+++|+|.||+++++|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~---------------~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNI---------------TFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 356788899999999999999999999999999987643 45899999999999999999999999
Q ss_pred HhcCCCC-------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 475 LDLDSRN-------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 475 l~~~p~~-------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
++++|++ .++|+++|.+|..++++++|+.+|++++++.|+ ++....+..+
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 9998876 479999999999999999999999999999986 4444444433
No 70
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=6.8e-16 Score=132.68 Aligned_cols=116 Identities=24% Similarity=0.318 Sum_probs=108.0
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..++..|+.+++.|+|.+|+..|+++++..|.+. .+++++|.|++++++|++|+.+|++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA---------------RGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 477899999999999999999999999999887643 45889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEID------PDNRDVKLEYKTLKEK 528 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~------P~~~~~~~~l~~l~~~ 528 (572)
+|+++.+++++|.+|..+|++++|+.+|+++++++ |++..+...+..+..+
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 9999998888887654
No 71
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.66 E-value=1.1e-16 Score=142.16 Aligned_cols=126 Identities=20% Similarity=0.263 Sum_probs=95.1
Q ss_pred CCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCCCC
Q 008251 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (572)
Q Consensus 53 ~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~ 132 (572)
++.||.|+|||+++ .||++|++|+ +.|.+|.++++|||++||.||++|++++|.|||++|||+++ .
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~--------~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD--------P 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC--------G
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC--------c
Confidence 67899999999999 8999999985 99999999999999999999999999999999999999876 5
Q ss_pred cEEEEEEEeEeeeccccccccceEEEEeecCc---ccCCCCCCCeEEEEEEEEeCCCeEeeecc
Q 008251 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (572)
Q Consensus 133 ~l~~~v~l~~~~~~~~~~~d~~v~k~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~~ 193 (572)
.+++.|.+..|.....+ ..+..+......|. +...--.++.|++|+||++++.++.++-+
T Consensus 69 ~lv~~v~~~~f~~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAGk~L~F~ve 131 (158)
T 3cgm_A 69 EGVQVVPLSAFPEDAEV-VPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVE 131 (158)
T ss_dssp GGEEEEEGGGSCTTSCC-CTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTTCCEEEEEE
T ss_pred ceEEEEEHHHCCCCCCC-ccCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccCCEEEEEEE
Confidence 67778877766431111 11111111111111 11122245899999999999999877653
No 72
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.63 E-value=3.8e-16 Score=130.90 Aligned_cols=87 Identities=22% Similarity=0.429 Sum_probs=75.9
Q ss_pred cCCCCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCC
Q 008251 48 EGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPT 127 (572)
Q Consensus 48 ~G~~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ 127 (572)
++ ..++.||.|.|+|++++ ||++|+++. +.|+.|.+|.++++|||+++|.||++|++++|.||+...||..+.
T Consensus 26 ~~-~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~--- 98 (113)
T 1hxv_A 26 SD-KKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL--- 98 (113)
T ss_dssp ----CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG---
T ss_pred CC-CCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC---
Confidence 35 57899999999999998 999999996 489999999999999999999999999999999984444997763
Q ss_pred CCCCCcEEEEEEEeEe
Q 008251 128 IPPNATLQFDVELLSW 143 (572)
Q Consensus 128 ip~~~~l~~~v~l~~~ 143 (572)
++++++|+|+|+++
T Consensus 99 --~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 --QSKPVTFEVVLKAI 112 (113)
T ss_dssp --GSCCCEEEEEECCB
T ss_pred --CCCEEEEEEEEEEE
Confidence 67999999999875
No 73
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.60 E-value=7.6e-15 Score=132.45 Aligned_cols=119 Identities=23% Similarity=0.222 Sum_probs=105.7
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|+.++..|+|++|+..|.+++++.+.+. .+++++|.||+++++|++|+.+|+++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP---------------IYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999887643 4588999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD--VKLEYKTLKEKMK 530 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~--~~~~l~~l~~~~~ 530 (572)
++|++..+|+++|.+|..+|++++|+.+|+++++++|++.. +...+..++.++.
T Consensus 74 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~ 129 (164)
T 3sz7_A 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIE 129 (164)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999976 4444444444443
No 74
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.59 E-value=9.4e-15 Score=130.25 Aligned_cols=105 Identities=12% Similarity=0.162 Sum_probs=98.6
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..+++.|+|++|+..|++++.+.|.+.. +++++|.|+..+++|++|+.+|+++++
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~---------------~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVD---------------YIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---------------HHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 35678899999999999999999999999999887543 488999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
++|+++.+|+++|.||..+|++++|+..|+++++++|+..
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999874
No 75
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.56 E-value=2.8e-14 Score=125.59 Aligned_cols=121 Identities=20% Similarity=0.205 Sum_probs=107.8
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..+++.|+|.+|+..|++++...|.+. .+++++|.|+.++++|++|+.+|++++.+
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA---------------RYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 466788999999999999999999999999887644 34889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN 533 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~ 533 (572)
+|+++.+++++|.+|..+|++++|+.+|+++++++|++........++...+...+
T Consensus 82 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~ 137 (142)
T 2xcb_A 82 DINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVT 137 (142)
T ss_dssp CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998877766666665555443
No 76
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.56 E-value=2.1e-14 Score=127.59 Aligned_cols=119 Identities=15% Similarity=0.180 Sum_probs=105.2
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|.+|+..|.+++...|.+. .+++++|.|+..+++|++|+.+|++++.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDS---------------RFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3466788999999999999999999999999887654 3478999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~ 530 (572)
++|+++.+++++|.+|..+|++++|+.+|+++++++|+++.......++...+.
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998766555555544443
No 77
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=3.9e-14 Score=126.13 Aligned_cols=115 Identities=13% Similarity=0.034 Sum_probs=98.6
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
+....+...|+.+++.|+|+.|+..|++++++.|.+. .+++++|.||.+++++++|+.+++++++
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP---------------KAHRFLGLLYELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 3456677889999999999999999999999887654 3488999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFD-IKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~-~~~al~l~P~~~~~~~~l~~l~ 526 (572)
++|+++.+++++|.+|..++++++|... +++|++++|+|+.+.....++.
T Consensus 94 ~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll 144 (150)
T 4ga2_A 94 LNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLL 144 (150)
T ss_dssp HCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 9999999999999999999999876655 6899999999988777666553
No 78
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.53 E-value=4.2e-14 Score=122.83 Aligned_cols=119 Identities=29% Similarity=0.402 Sum_probs=107.4
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|..|+..|.+++...+.+. .+++++|.|++.+++|+.|+.+++++++++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA---------------VYYTNRALCYLKMQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999877542 358899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD-----NRDVKLEYKTLKEKMKEY 532 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~-----~~~~~~~l~~l~~~~~~~ 532 (572)
|+++.+++++|.+|..+|++++|+..|+++++++|+ +..+...+..+..+....
T Consensus 74 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 74 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNS 132 (137)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 777888888776655433
No 79
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.52 E-value=2.9e-14 Score=126.94 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=99.8
Q ss_pred HHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHH
Q 008251 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKA 484 (572)
Q Consensus 405 ~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka 484 (572)
.|..+..+|++++|+..|++++...|..... ++++|.+|+++++|++|+.+++++++++|+++.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~---------------~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIK---------------GFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTT---------------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHH---------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 5777888999999999999999877654433 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 008251 485 LYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN 533 (572)
Q Consensus 485 ~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~ 533 (572)
|+++|.+|..+|++++|+.+|+++++++|++..+...+..+.....+..
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTD 116 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Confidence 9999999999999999999999999999999998888887766555443
No 80
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.49 E-value=1.1e-12 Score=117.31 Aligned_cols=123 Identities=24% Similarity=0.394 Sum_probs=111.2
Q ss_pred hHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHH
Q 008251 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLC 471 (572)
Q Consensus 392 ~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~ 471 (572)
.......+..+...|..++..|+|..|+..|.+++...+.. ..+++++|.|+..+++|++|+.++
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35667889999999999999999999999999999987653 245889999999999999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 472 TKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 472 ~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
+++++.+|+++.+++++|.+|..+|++++|+.+|+++++++|++..+...+..+....
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 128 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 128 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988877777664444
No 81
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=5.2e-13 Score=125.63 Aligned_cols=131 Identities=14% Similarity=0.076 Sum_probs=106.4
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChH-HHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e-~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
+..+..+|..++..|+|++|+..|+++++..|.+...... ...........+++++|.+|.++++|++|+..|++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999988754321000 000001112233445999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
+|+++.+++++|.+|..+|++++|+.+|+++++++|++..+...+..+....
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLT 135 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888765433
No 82
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.46 E-value=5.3e-13 Score=111.69 Aligned_cols=114 Identities=23% Similarity=0.260 Sum_probs=104.5
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|..|+..|.+++...+.+ ..+++++|.++..+++|++|+..++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 46778899999999999999999999999987653 235889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
+|++..+++++|.++..+|++++|+..|+++++++|++..+...+..+.
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999988887777664
No 83
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.45 E-value=1.9e-13 Score=114.49 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEEEEEeCCCeEeeec--cceEEEeCCCCCcchHHHHHhhccCCcEEEEEec-CCCccCCCCCCCCCCCC
Q 008251 167 ENPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK-PQYGFGEKGKSASGNEG 243 (572)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp-~~~~~g~~~~~~~~~~~ 243 (572)
..+..||.|+++|++++ +|++|+++ +|+.|.+|.++++|||+++|.+|++|++++|.|| |.. ||..+.
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~------- 98 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL------- 98 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTCCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG-------
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCCccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC-------
Confidence 46788999999999999 99999987 7999999999999999999999999999999996 554 887643
Q ss_pred CCCCCCeEEEEEEEecc
Q 008251 244 AVPPNATLQIALELVSW 260 (572)
Q Consensus 244 ~ip~~~~l~~~v~l~~~ 260 (572)
++++|+|+|+|+++
T Consensus 99 ---~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 ---QSKPVTFEVVLKAI 112 (113)
T ss_dssp ---GSCCCEEEEEECCB
T ss_pred ---CCCEEEEEEEEEEE
Confidence 67999999999875
No 84
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.44 E-value=6.2e-13 Score=147.95 Aligned_cols=136 Identities=15% Similarity=0.104 Sum_probs=79.6
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCC-------------ChHHHH------HHHHHHHHhHhhHHHH
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKK------QAKALKVACNLNNAAC 457 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~------~~~~~~~~~~~nla~~ 457 (572)
..+..+...|+.+.++|+|++|+..|++|+++.|.+... .++-.. ++..-...+++|+|.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 356677777777878888888888888877776653221 000000 0001112345566666
Q ss_pred HHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 008251 458 KLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEY 532 (572)
Q Consensus 458 ~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~ 532 (572)
+.+++++++|+.+|++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|++..+...+..+...+.++
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~ 161 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDW 161 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccH
Confidence 666666666666666666666666666666666666666666666666666666666665555555555544433
No 85
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.43 E-value=1.2e-12 Score=112.08 Aligned_cols=116 Identities=10% Similarity=0.086 Sum_probs=102.9
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
..+...|..++..|+|.+|+..|.++++..|.... ...+++++|.|++++++|++|+.++++++..+|
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~------------~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p 70 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY------------TPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 70 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC
Confidence 45678899999999999999999999998776442 234588999999999999999999999999999
Q ss_pred CC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 480 RN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 480 ~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
++ +.+++++|.+|..+|++++|+..|+++++..|++..+......+..
T Consensus 71 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 71 THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 99 8999999999999999999999999999999999877666665543
No 86
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.43 E-value=5.4e-13 Score=117.85 Aligned_cols=125 Identities=16% Similarity=0.199 Sum_probs=89.9
Q ss_pred CCCCCCCeEEEEEEEEeC-CCeEeeec---cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCC
Q 008251 167 ENPKDLDEVLVNYEARLE-DGMVVGKA---DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNE 242 (572)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~-~g~~~~~~---~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~ 242 (572)
..++.||.|++||++++. +|++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|||+.|||+.+.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~------ 78 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES------ 78 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS------
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc------
Confidence 457789999999999998 99999987 69999999999999999999999999999999999999996543
Q ss_pred CCCCCCCeEEEEEEEecccceeeeeCCcceEEEEEeCCC---CcCCCCCCCEEEEEEEEEecCCcEE
Q 008251 243 GAVPPNATLQIALELVSWKTVSEITDDKKVIKKILKEGD---GFERPNEGAVVKVKLIGKLQDGTVF 306 (572)
Q Consensus 243 ~~ip~~~~l~~~v~l~~~~~~~d~~~d~~~~k~il~~G~---g~~~p~~~~~v~v~~~~~l~~g~~~ 306 (572)
.+++.+....|.. .. ..-|..+.---..|. +...-..++.|+|+|++.|++-++.
T Consensus 79 -------~~v~~v~~~~f~~-~~-~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~ 136 (151)
T 2kr7_A 79 -------SYLQEVPRDQFEG-IE-LEKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLA 136 (151)
T ss_dssp -------CEEEEEEGGGGTT-SC-CCTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEE
T ss_pred -------ceEEEEcHHHcCC-CC-CccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEE
Confidence 4788888888721 11 112222221111111 1111234566777777777655443
No 87
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.43 E-value=2.2e-13 Score=121.61 Aligned_cols=81 Identities=20% Similarity=0.354 Sum_probs=72.9
Q ss_pred CCCCCCeEEEEEEEEeCCCeEeeec----cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCC
Q 008251 168 NPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEG 243 (572)
Q Consensus 168 ~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~ 243 (572)
.++.|+.|+++|++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+.+
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~-------- 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS-------- 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC--------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC--------
Confidence 5788999999999999999999987 7999999999999999999999999999999999999999654
Q ss_pred CCCCCCeEEEEEEEeccc
Q 008251 244 AVPPNATLQIALELVSWK 261 (572)
Q Consensus 244 ~ip~~~~l~~~v~l~~~~ 261 (572)
..+++.+....|.
T Consensus 96 -----~~lv~~vp~~~f~ 108 (169)
T 4dt4_A 96 -----PDLIQYFSRREFM 108 (169)
T ss_dssp -----GGGEEEEEGGGGT
T ss_pred -----hHHEEEeCHHHCC
Confidence 3467777777775
No 88
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.43 E-value=2e-12 Score=110.20 Aligned_cols=122 Identities=30% Similarity=0.320 Sum_probs=108.5
Q ss_pred HHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHH
Q 008251 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (572)
Q Consensus 393 ~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~ 472 (572)
+.....+..+...|..++..|+|..|+..|.+++...+.. ..+++++|.++..+++|++|+..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------AVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhhchHHHHHHHH
Confidence 3445667889999999999999999999999999886643 2358899999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 473 KVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 473 ~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
++++.+|++..+++++|.+|..++++++|+..|+++++++|++..+...+..+...+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 71 RAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988877777665443
No 89
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=9.7e-13 Score=115.27 Aligned_cols=116 Identities=33% Similarity=0.559 Sum_probs=104.9
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|..|+..|+++++..+.. .....+++++|.||+.+++|++|+.+|+++++.+
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATP------------QDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD 95 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc------------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 5678899999999999999999999999876532 2235668899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
|++..+++++|.+|..++++++|+.+|+++++++|++..+...+..+.
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 96 GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988887777653
No 90
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.42 E-value=3.5e-13 Score=115.19 Aligned_cols=101 Identities=13% Similarity=0.054 Sum_probs=89.5
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (572)
.+...|..+++.|++.+|+..|+++++..|.+. .+++++|.|+..++++++|+..++++++++|+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPERE---------------EAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999999999888654 34889999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
++.+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 84 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 84 DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 999999999999999999999999999999999874
No 91
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.42 E-value=1.7e-13 Score=121.17 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=69.2
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec-----------------cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCcc
Q 008251 169 PKDLDEVLVNYEARLEDGMVVGKA-----------------DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGF 231 (572)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~-----------------~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~ 231 (572)
++.||.|+++|++++ +|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 567899999999999 99999986 489999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEEEEeccc
Q 008251 232 GEKGKSASGNEGAVPPNATLQIALELVSWK 261 (572)
Q Consensus 232 g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (572)
|+.+. .++..+....|.
T Consensus 81 G~~~~-------------~~V~~v~~~~f~ 97 (157)
T 3pr9_A 81 GKRDP-------------SKIKLIPLSEFT 97 (157)
T ss_dssp CCCCG-------------GGEEEEEHHHHH
T ss_pred CCCCh-------------HhEEEcCHHHCC
Confidence 97654 355666665553
No 92
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=112.47 Aligned_cols=115 Identities=30% Similarity=0.389 Sum_probs=104.3
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
....+...|..++..|+|..|+..|.++++..+.+ ..+++++|.++..+++|++|+.+++++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------AKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 36678899999999999999999999999876643 245889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
+|++..+++++|.+|..++++++|+..|+++++++|++..+...+..+..
T Consensus 80 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 80 EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887777776644
No 93
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.39 E-value=2e-12 Score=110.25 Aligned_cols=118 Identities=27% Similarity=0.352 Sum_probs=105.1
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|..|+..|.+++...+.. ..+++++|.++..+++|++|+.++++++..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 46778999999999999999999999999986643 245889999999999999999999999999
Q ss_pred CCCC-------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 008251 478 DSRN-------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 531 (572)
Q Consensus 478 ~p~~-------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~ 531 (572)
+|++ ..+++++|.+|..+|++++|+.+|++++++.| +..+...+..+...+++
T Consensus 68 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 68 GRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 8877 99999999999999999999999999999999 57777888777665543
No 94
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.37 E-value=1.7e-12 Score=144.35 Aligned_cols=100 Identities=19% Similarity=0.115 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (572)
.+...|+.+...|++++|+..|++|+++.|. ...+++|+|.+|.++|++++|+.+|++||+++|+
T Consensus 79 a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~---------------~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~ 143 (723)
T 4gyw_A 79 AYSNMGNTLKEMQDVQGALQCYTRAIQINPA---------------FADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 143 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3444444444444444444444444444333 2456899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
++.+++++|.+|..++++++|++.|++++++.|+.
T Consensus 144 ~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 144 FPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred ChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 99999999999999999999999999999988765
No 95
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.37 E-value=4e-12 Score=120.78 Aligned_cols=104 Identities=21% Similarity=0.331 Sum_probs=96.4
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIE-YDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~-~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
..+...|..++..|+|.+|+..|+++++..+ .+. .+++++|.|+..+++|++|+.+++++++.+
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~---------------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS---------------VTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc---------------HHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 5688999999999999999999999999876 322 347789999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDV 518 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~ 518 (572)
|++..+++++|.+|..+|++++|+..|+++++++|++...
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 9999999999999999999999999999999999999844
No 96
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.37 E-value=6.9e-13 Score=117.15 Aligned_cols=102 Identities=19% Similarity=0.233 Sum_probs=90.7
Q ss_pred HcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCH----------HHHHHHHHHHHhcCCC
Q 008251 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDY----------KQAEKLCTKVLDLDSR 480 (572)
Q Consensus 411 ~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~----------~~Ai~~~~~al~~~p~ 480 (572)
+.+.|++|+..|++++++.|.+.. +++|+|.|+..++++ ++|+..|++||+++|+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~ae---------------a~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDAD---------------NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHH---------------HHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC
Confidence 457799999999999999987653 388999999999875 5999999999999999
Q ss_pred CHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 481 NVKALYRRAQAYIQMA-----------DLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~-----------~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
+..+||++|.+|..+| +|++|+++|++|++++|++...+..+..+.+
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~k 136 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAK 136 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 9999999999999985 8999999999999999999887777765544
No 97
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.37 E-value=1.9e-12 Score=122.59 Aligned_cols=118 Identities=17% Similarity=0.137 Sum_probs=69.8
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc-----------CCHHHHHHH
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-----------KDYKQAEKL 470 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~-----------~~~~~Ai~~ 470 (572)
+...|..+++.|++++|+..|++++++.|.+. .+++++|.++.++ |++++|+..
T Consensus 42 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~ 106 (217)
T 2pl2_A 42 LYWLARTQLKLGLVNPALENGKTLVARTPRYL---------------GGYMVLSEAYVALYRQAEDRERGKGYLEQALSV 106 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHhhhhhhhhcccccCHHHHHHH
Confidence 34444444444444444444444444443322 2356666666666 666666666
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 471 CTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 471 ~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
++++++++|+++.+++.+|.+|..+|++++|+..|+++++++ ++..+...+..+...+.+.+++
T Consensus 107 ~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A 170 (217)
T 2pl2_A 107 LKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEA 170 (217)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHH
Confidence 666666666666666666666666666666666666666666 6666666666655555444443
No 98
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.37 E-value=8.7e-13 Score=120.86 Aligned_cols=124 Identities=19% Similarity=0.157 Sum_probs=88.2
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec---cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCC
Q 008251 169 PKDLDEVLVNYEARLEDGMVVGKA---DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAV 245 (572)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~---~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~i 245 (572)
++.+|.|+++|++++.+|++|+++ +|+.|.+|.++++|||+++|.+|++|++++|.|||+.+||+.+.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~--------- 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE--------- 73 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT---------
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh---------
Confidence 567899999999999899999987 69999999999999999999999999999999999999997543
Q ss_pred CCCCeEEEEEEEecccceeeeeCCcceEEEEEeCC--CCcCCCCCCCEEEEEEEEEecCCcEE
Q 008251 246 PPNATLQIALELVSWKTVSEITDDKKVIKKILKEG--DGFERPNEGAVVKVKLIGKLQDGTVF 306 (572)
Q Consensus 246 p~~~~l~~~v~l~~~~~~~d~~~d~~~~k~il~~G--~g~~~p~~~~~v~v~~~~~l~~g~~~ 306 (572)
.+++.|.+..|..... ...+..+.---..| .+...-..+++|+|+|+..|++.++.
T Consensus 74 ----~lV~~vp~~~f~~~~~-~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~ 131 (196)
T 2kfw_A 74 ----NLVQRVPKDVFMGVDE-LQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLK 131 (196)
T ss_dssp ----TTCEEECGGGCCCSSC-CCTTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCE
T ss_pred ----hhEEEEEHHHCCCccC-cccCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEE
Confidence 3566666666642111 11222221111111 01123344667777777777655443
No 99
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.36 E-value=2.9e-12 Score=126.56 Aligned_cols=102 Identities=31% Similarity=0.446 Sum_probs=95.8
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..++..|+.++..|+|.+|+..|++|+...|.+. .+++|+|.||+++++|++|+.+|+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA---------------VYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999877543 358899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
|++.++++++|.+|..+|++++|+.+|+++++++|++
T Consensus 69 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999976
No 100
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.35 E-value=9.1e-13 Score=123.51 Aligned_cols=67 Identities=22% Similarity=0.419 Sum_probs=62.4
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec-----------------cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCcc
Q 008251 169 PKDLDEVLVNYEARLEDGMVVGKA-----------------DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGF 231 (572)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~-----------------~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~ 231 (572)
++.||.|++||++++ +|++|+++ +|+.|.+|.++++|||+++|.+|++|+++++.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 567899999999999 99999986 389999999999999999999999999999999999999
Q ss_pred CCCCC
Q 008251 232 GEKGK 236 (572)
Q Consensus 232 g~~~~ 236 (572)
|+.+.
T Consensus 81 Ge~~~ 85 (231)
T 3prb_A 81 GKRDP 85 (231)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 97654
No 101
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.35 E-value=2.1e-12 Score=116.02 Aligned_cols=80 Identities=20% Similarity=0.292 Sum_probs=71.1
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec---cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCC
Q 008251 169 PKDLDEVLVNYEARLEDGMVVGKA---DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAV 245 (572)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~---~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~i 245 (572)
++.||.|+++|++++.+|++|+++ +|+.|.+|.++++|||+++|.+|++|++++|.|||+.|||+.+.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~--------- 73 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE--------- 73 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT---------
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh---------
Confidence 567899999999999899999987 69999999999999999999999999999999999999997643
Q ss_pred CCCCeEEEEEEEeccc
Q 008251 246 PPNATLQIALELVSWK 261 (572)
Q Consensus 246 p~~~~l~~~v~l~~~~ 261 (572)
.+++.+....|.
T Consensus 74 ----~~v~~v~~~~f~ 85 (171)
T 2k8i_A 74 ----NLVQRVPKDVFM 85 (171)
T ss_dssp ----TSEEEEEGGGGT
T ss_pred ----hhEEEeeHHHCC
Confidence 356777777764
No 102
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.35 E-value=2e-13 Score=120.55 Aligned_cols=80 Identities=21% Similarity=0.393 Sum_probs=70.5
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec-----------------cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCcc
Q 008251 169 PKDLDEVLVNYEARLEDGMVVGKA-----------------DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGF 231 (572)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~-----------------~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~ 231 (572)
++.||.|++||++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|||+.||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 567899999999999999999987 489999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEEEEeccc
Q 008251 232 GEKGKSASGNEGAVPPNATLQIALELVSWK 261 (572)
Q Consensus 232 g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (572)
|+.+. .+++.+.+..|.
T Consensus 82 G~~~~-------------~~v~~v~~~~f~ 98 (151)
T 1ix5_A 82 GNRNE-------------MLIQKIPRDAFK 98 (151)
T ss_dssp CSCCS-------------TTBCCEETHHHH
T ss_pred CCCCc-------------cEEEEEEHHHcC
Confidence 97644 356666666664
No 103
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.33 E-value=3.7e-12 Score=131.38 Aligned_cols=79 Identities=16% Similarity=0.067 Sum_probs=52.8
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~ 528 (572)
+++|+|.++.++++|++|+.+|+++|+++|+|..+|+++|.++..+|++++|+.+|+++++++|++..+...+..+...
T Consensus 168 a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 168 VWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4666666666666666666666666666666666666666666666666666666666666666666666666655444
No 104
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.32 E-value=1.5e-11 Score=112.42 Aligned_cols=145 Identities=14% Similarity=0.155 Sum_probs=112.7
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCC-------------ChHHHHHHHH------HHHHhHhhHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQAKA------LKVACNLNNAACKL 459 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~~~~------~~~~~~~nla~~~~ 459 (572)
+..+...|+.++++|+|++|+..|++|+++.|.+... .++....... ....++.++|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 5667889999999999999999999999988764321 0000111111 12345678888888
Q ss_pred hcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 008251 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKF 539 (572)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~ 539 (572)
..++++.|+..+.+++.++|++..+++.+|.+|..+|++++|+..|+++++++|++..+...++.+...+.+.+++. ..
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~-~~ 163 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAV-KY 163 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHH-HH
Confidence 89999999999999999999999999999999999999999999999999999999988888888877776665554 33
Q ss_pred HHhhh
Q 008251 540 YGNMF 544 (572)
Q Consensus 540 ~~~~f 544 (572)
|.+..
T Consensus 164 ~~~al 168 (184)
T 3vtx_A 164 FKKAL 168 (184)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 105
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.32 E-value=2e-12 Score=109.49 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=83.7
Q ss_pred HcCcHHHHHHHHHHHHHH---hhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 008251 411 KAGKYARASKRYEKAVKY---IEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYR 487 (572)
Q Consensus 411 ~~g~~~~A~~~y~~al~~---~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~ 487 (572)
..|+|++|+..|+++++. .|. ...+++++|.||+++++|++|+.+++++++++|+++.++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~---------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 66 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD---------------LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVF 66 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH---------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHH
Confidence 358899999999999987 332 34568999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008251 488 RAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEY 522 (572)
Q Consensus 488 ~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 522 (572)
+|.+|..+|++++|+..|++++.+.|++..+....
T Consensus 67 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 67 YAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 99999999999999999999999999998765443
No 106
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.31 E-value=1.3e-11 Score=116.74 Aligned_cols=89 Identities=21% Similarity=0.216 Sum_probs=76.3
Q ss_pred HHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
-...+++++|.++..+|++++|+..++++++++ +++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+
T Consensus 116 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~ 194 (217)
T 2pl2_A 116 RYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASA 194 (217)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 345678999999999999999999999999999 9999999999999999999999999999999999999888888877
Q ss_pred HHHHHHHHHH
Q 008251 526 KEKMKEYNKK 535 (572)
Q Consensus 526 ~~~~~~~~~~ 535 (572)
.....+.+++
T Consensus 195 ~~~~g~~~~A 204 (217)
T 2pl2_A 195 LLLKGKAEEA 204 (217)
T ss_dssp HTC-------
T ss_pred HHHccCHHHH
Confidence 6655555443
No 107
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.31 E-value=3.8e-11 Score=101.18 Aligned_cols=114 Identities=32% Similarity=0.416 Sum_probs=102.7
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|++..|+..|.+++...+.. ..+++++|.++...+++++|+..++++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 5567889999999999999999999999876532 2347899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
|.+..+++.+|.+|..++++++|+..|+++++++|++..+...+..+..
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888877776643
No 108
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.31 E-value=7.7e-12 Score=128.95 Aligned_cols=121 Identities=12% Similarity=0.023 Sum_probs=100.1
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCC-HHHHHHHHHHHHh
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD-YKQAEKLCTKVLD 476 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~-~~~Ai~~~~~al~ 476 (572)
.+..+...|..+.+.|+|++|+..|++++.+.|.+. .+++++|.++..+++ |++|+.+|+++|+
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~---------------~a~~~~g~~l~~~g~d~~eAl~~~~~al~ 160 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANY---------------TVWHFRRVLLKSLQKDLHEEMNYITAIIE 160 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCH---------------HHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 466677888888888889999999999888887654 347888888888886 9999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN 533 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~ 533 (572)
++|++..+|+++|.+|..+|++++|+.+|++|++++|+|..+...++.+...+...+
T Consensus 161 l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~ 217 (382)
T 2h6f_A 161 EQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD 217 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCT
T ss_pred HCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChH
Confidence 889888899999999998999999999999999999988888887777766655443
No 109
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.31 E-value=3.7e-12 Score=135.58 Aligned_cols=120 Identities=26% Similarity=0.407 Sum_probs=108.9
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
.+.+..+...|+.+++.|+|++|+..|++|++..+.. ..+++|+|.||.++++|++|+.++++|+
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al 67 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDATRAI 67 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3467888999999999999999999999999987654 3458899999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008251 476 DLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (572)
Q Consensus 476 ~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~ 530 (572)
+++|+++.+++++|.+|..+|++++|++.|++|++++|++..+...+..+....+
T Consensus 68 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 122 (477)
T 1wao_1 68 ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK 122 (477)
T ss_dssp HSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888887744443
No 110
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.28 E-value=4.3e-12 Score=112.53 Aligned_cols=78 Identities=15% Similarity=0.278 Sum_probs=70.7
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeeccceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCC
Q 008251 169 PKDLDEVLVNYEARLEDGMVVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPN 248 (572)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ip~~ 248 (572)
++.||.|+++|+++ .+|++|+++. +.|.+|.++++|||+++|.+|++|++++|.|||+.+||+.+
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~------------- 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD------------- 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC-------------
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC-------------
Confidence 56789999999999 8999999888 99999999999999999999999999999999999999653
Q ss_pred CeEEEEEEEeccc
Q 008251 249 ATLQIALELVSWK 261 (572)
Q Consensus 249 ~~l~~~v~l~~~~ 261 (572)
..+++.|.+..|.
T Consensus 68 ~~lv~~v~~~~f~ 80 (158)
T 3cgm_A 68 PEGVQVVPLSAFP 80 (158)
T ss_dssp GGGEEEEEGGGSC
T ss_pred cceEEEEEHHHCC
Confidence 4578888888875
No 111
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.26 E-value=5.7e-12 Score=131.04 Aligned_cols=99 Identities=25% Similarity=0.441 Sum_probs=86.7
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCC
Q 008251 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (572)
Q Consensus 51 ~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (572)
..++.||.|+|||+++. ||+.|+++. +.|+.|.+|.|+++|||+++|.||++|++++|.||++.+||..+. +
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-----a 227 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-----K 227 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-----C
Confidence 56899999999999995 999999987 479999999999999999999999999999999999999997764 6
Q ss_pred CCcEEEEEEEeEeeeccccccccceEE
Q 008251 131 NATLQFDVELLSWTSVKDICKDGGIIK 157 (572)
Q Consensus 131 ~~~l~~~v~l~~~~~~~~~~~d~~v~k 157 (572)
+.+++|+|+|+++........|..+.+
T Consensus 228 g~~~~F~V~v~~v~~~~lpeldDEfak 254 (432)
T 1w26_A 228 GKAAKFAINLKKVEERELPELTAEFIK 254 (432)
T ss_dssp SCEEEEEEECCEECCEECCCCSHHHHT
T ss_pred CceEEEEEEEEEEeccCCCCcchHHHH
Confidence 789999999999987555554555443
No 112
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.26 E-value=3.6e-11 Score=112.91 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=91.1
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q 008251 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNV 482 (572)
Q Consensus 403 k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ 482 (572)
...|..+++.|+|++|+..|++++++.|.+. .+++++|.++..+|++++|+.+|+++++++|+++
T Consensus 58 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 58 TELALAYKKNRNYDKAYLFYKELLQKAPNNV---------------DCLEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 3499999999999999999999999988654 3488999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-----------------------------------cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 483 KALYRRAQAYIQ-----------------------------------MADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 483 ka~~~~g~a~~~-----------------------------------l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
.+++++|.+|.. +++|++|+.+|++|++++|++ .+...+.++.
T Consensus 123 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i~ 200 (208)
T 3urz_A 123 AANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHHHH
Confidence 888887777643 356889999999999999975 3445555543
No 113
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.25 E-value=5.4e-11 Score=108.18 Aligned_cols=113 Identities=15% Similarity=0.130 Sum_probs=100.5
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHH-HHhcCCH--HHHHHHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAAC-KLKLKDY--KQAEKLCTKVL 475 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~-~~k~~~~--~~Ai~~~~~al 475 (572)
+..+...|..++..|+|..|+..|.+++.+.+.+. .+++++|.+ ++..+++ ++|+..+++++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~l~~~~~~~~~~~A~~~~~~al 108 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA---------------ELYAALATVLYYQASQHMTAQTRAMIDKAL 108 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH---------------HHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH---------------HHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 45678899999999999999999999999887543 347899999 8899999 99999999999
Q ss_pred hcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 476 DLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 476 ~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
+.+|++..+++.+|.+|..+|++++|+..|+++++++|++......+..+.
T Consensus 109 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 109 ALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999865555554443
No 114
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.25 E-value=3.5e-12 Score=113.52 Aligned_cols=89 Identities=13% Similarity=-0.012 Sum_probs=82.6
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~ 528 (572)
..++++|.+++++|+|++|+..|++++.++|+++.+|+++|.+|..+|+|++|+..|++|++++|++..+...+..+...
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~ 116 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR 116 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHH
Q 008251 529 MKEYNKKEA 537 (572)
Q Consensus 529 ~~~~~~~~~ 537 (572)
+.+.+++..
T Consensus 117 lg~~~eA~~ 125 (151)
T 3gyz_A 117 LKAPLKAKE 125 (151)
T ss_dssp TTCHHHHHH
T ss_pred cCCHHHHHH
Confidence 776665553
No 115
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.25 E-value=3.7e-11 Score=114.06 Aligned_cols=121 Identities=13% Similarity=0.123 Sum_probs=106.1
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|.+|+..|+++++..|.+. ........+++++|.++..+++|++|+.+|+++++++
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA--------TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH--------HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 45677889999999999999999999998877543 1233455679999999999999999999999999999
Q ss_pred CC--CHHHHHHHHHHHHhcCCH---------------------------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 479 SR--NVKALYRRAQAYIQMADL---------------------------DLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 479 p~--~~ka~~~~g~a~~~l~~~---------------------------~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
|+ ++.+++++|.+|..+++. ++|+.+|+++++++|++..+...+..++.
T Consensus 148 p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~ 225 (228)
T 4i17_A 148 SKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKA 225 (228)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 99 999999999999999998 99999999999999999998888877643
No 116
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.24 E-value=1.8e-11 Score=101.27 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=92.9
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
..+...|..++..|+|.+|+..|.++++..+... .+++++|.++..+++|++|+.+++++++.+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 71 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEES---------------KYWLMKGKALYNLERYEEAVDCYNYVINVIE 71 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 4567889999999999999999999999876432 3478999999999999999999999999999
Q ss_pred C--CHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHhCCCC
Q 008251 480 R--NVKALYRRAQAYIQM-ADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 480 ~--~~ka~~~~g~a~~~l-~~~~~A~~~~~~al~l~P~~ 515 (572)
+ +..+++++|.++..+ +++++|+++|++++...|.+
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 72 DEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred ccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9 999999999999999 99999999999999999976
No 117
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.24 E-value=4.3e-11 Score=111.99 Aligned_cols=121 Identities=23% Similarity=0.217 Sum_probs=104.8
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|++|+..|.+++.. . ..+++++|.+|.++++|++|+.+|++++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~-----~-------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQDP-----H-------------SRICFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC-----C-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC-----C-------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4667889999999999999999999998521 1 246889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR----------------DVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~----------------~~~~~l~~l~~~~~~~~~~~ 536 (572)
+|+++.+++++|.+|..+|++++|+.+|++++++.|++. .+...+..+...+.+..++.
T Consensus 67 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 141 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE 141 (213)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHH
Confidence 999999999999999999999999999999999999876 77777777766555444443
No 118
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.23 E-value=9.9e-11 Score=106.96 Aligned_cols=118 Identities=15% Similarity=0.057 Sum_probs=90.1
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCC-------------ChHHHHH------HHHHHHHhHhhHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQ------AKALKVACNLNNAACKL 459 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~------~~~~~~~~~~nla~~~~ 459 (572)
+..+...|..+++.|+++.|+..+.+++...+..... ....... .......++.++|.++.
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 3456667777777777777777777777655432211 0000000 01112346789999999
Q ss_pred hcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
++++|++|+..++++++++|+++.+++++|.+|..+|++++|+.+|++|++++|++.
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 999999999999999999999999999999999999999999999999999999873
No 119
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.23 E-value=5.2e-11 Score=102.35 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=85.1
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
....+.|+|.++++.|+|++|+.+|+++|+++|+++.+|+++|.||..+|++++|+.+|++|++++|++..+...++.+.
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 91 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACL 91 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 34557899999999999999999999999999999999999999999999999999999999999999999988888887
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 008251 527 EKMKEYNKKEAKFYGNMF 544 (572)
Q Consensus 527 ~~~~~~~~~~~~~~~~~f 544 (572)
..+.+..++.. .|.+..
T Consensus 92 ~~~~~~~~A~~-~~~~al 108 (126)
T 4gco_A 92 VAMREWSKAQR-AYEDAL 108 (126)
T ss_dssp HHTTCHHHHHH-HHHHHH
T ss_pred HHCCCHHHHHH-HHHHHH
Confidence 77766665543 344433
No 120
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.21 E-value=2e-10 Score=115.67 Aligned_cols=122 Identities=25% Similarity=0.351 Sum_probs=108.5
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
......|..+++.|++++|+..|++++...+.+. .....++.++|.++.+++++++|+..++++++.+|
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 303 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSVA-----------EYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP 303 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch-----------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 3455679999999999999999999999876532 23445678999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 008251 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEY 532 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~ 532 (572)
+++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+...+++.
T Consensus 304 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 304 DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887766544
No 121
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.3e-10 Score=111.43 Aligned_cols=112 Identities=25% Similarity=0.320 Sum_probs=83.1
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|.+|+..|++++...+.+. .+++++|.++.++++|++|+.+++++++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA---------------RGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccH---------------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 44566777777777888888888888777655422 346777888888888888888888888888
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEID------PDNRDVKLEYKTL 525 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~------P~~~~~~~~l~~l 525 (572)
|+++.+++++|.+|..+|++++|+..|+++++++ |++..+...+.++
T Consensus 204 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 204 PNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 8888888888888888888888888888888877 7776666665543
No 122
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.17 E-value=3.5e-10 Score=107.45 Aligned_cols=111 Identities=13% Similarity=0.128 Sum_probs=96.7
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+..+|..++..|+|++|+..|+++++..|.... ...+++++|.||+++++|++|+..++++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY------------SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 456788999999999999999999999998775432 23458899999999999999999999999999
Q ss_pred CCCHH---HHHHHHHHHHh------------------cCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008251 479 SRNVK---ALYRRAQAYIQ------------------MADLDLAEFDIKKALEIDPDNRDVKLE 521 (572)
Q Consensus 479 p~~~k---a~~~~g~a~~~------------------l~~~~~A~~~~~~al~l~P~~~~~~~~ 521 (572)
|++.. ++|++|.++.. ++++++|+..|+++++..|++..+...
T Consensus 72 P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a 135 (225)
T 2yhc_A 72 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDA 135 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHH
Confidence 99865 89999999987 578999999999999999999755443
No 123
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.16 E-value=2.1e-10 Score=111.33 Aligned_cols=109 Identities=18% Similarity=0.234 Sum_probs=97.8
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..+++.|+|.+|+..|+++++..|.+.. ...+++++|.||+++++|++|+..++++++.+
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW------------AADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc------------hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 567889999999999999999999999998776432 24568899999999999999999999999998
Q ss_pred CCC---HHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHhCCCCHHHH
Q 008251 479 SRN---VKALYRRAQAYIQ--------MADLDLAEFDIKKALEIDPDNRDVK 519 (572)
Q Consensus 479 p~~---~ka~~~~g~a~~~--------l~~~~~A~~~~~~al~l~P~~~~~~ 519 (572)
|++ ..+++++|.+|.. +|++++|+..|++++++.|++..+.
T Consensus 83 p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 83 QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 854 6899999999999 9999999999999999999986555
No 124
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.16 E-value=5.3e-10 Score=108.47 Aligned_cols=114 Identities=19% Similarity=0.055 Sum_probs=102.1
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|++|+..|.+++...+... .+++++|.++..+++|++|+.+++++++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~la~~~~~~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMP---------------EVFNYLGIYLTQAGNFDAAYEAFDSVLE 105 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 4567788999999999999999999999999876532 3488999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
++|++..+++.+|.+|..+|++++|+..|+++++++|++......+..+
T Consensus 106 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 106 LDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999997655544433
No 125
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.14 E-value=3.7e-10 Score=96.11 Aligned_cols=119 Identities=29% Similarity=0.378 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (572)
.+...|..++..|++++|+..|.++++..+.. ..+++++|.++...++++.|+..+++++..+|.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 67 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 67 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC
Confidence 45678999999999999999999999875532 234778999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q 008251 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNK 534 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~ 534 (572)
+..+++.+|.++...|++++|+..|+++++..|.+..+...+..+.....+..+
T Consensus 68 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 121 (136)
T 2fo7_A 68 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDE 121 (136)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHH
T ss_pred chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHH
Confidence 999999999999999999999999999999999998777777766555444443
No 126
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.14 E-value=7.6e-10 Score=107.33 Aligned_cols=119 Identities=16% Similarity=0.190 Sum_probs=102.2
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh--------cCCHHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK--------LKDYKQAEKL 470 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k--------~~~~~~Ai~~ 470 (572)
...+...|..+++.|+|..|+..|+++++..|.+.. ...+++++|.|+++ ++++++|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR------------VPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT------------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch------------hHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 456789999999999999999999999998876543 23558899999999 9999999999
Q ss_pred HHHHHhcCCCCHHHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH
Q 008251 471 CTKVLDLDSRNVKAL-----------------YRRAQAYIQMADLDLAEFDIKKALEIDPDN---RDVKLEYKTLKEKM 529 (572)
Q Consensus 471 ~~~al~~~p~~~ka~-----------------~~~g~a~~~l~~~~~A~~~~~~al~l~P~~---~~~~~~l~~l~~~~ 529 (572)
++++++.+|++..+. +.+|.+|..+|++++|+..|+++++..|++ ..+...+..+...+
T Consensus 120 ~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 120 FQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 999999999986555 999999999999999999999999999995 34566666655444
No 127
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.14 E-value=1.7e-11 Score=125.76 Aligned_cols=100 Identities=20% Similarity=0.429 Sum_probs=87.1
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCC
Q 008251 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (572)
Q Consensus 51 ~~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (572)
..++.||.|+|||+++. ||+.|+++. +.|+.|.+|.|+++|||+++|.||++|++++|.|+++..||..+. +
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-----a 230 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-----K 230 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----C
Confidence 46899999999999994 999999884 479999999999999999999999999999999998788987654 6
Q ss_pred CCcEEEEEEEeEeeeccccccccceEEE
Q 008251 131 NATLQFDVELLSWTSVKDICKDGGIIKK 158 (572)
Q Consensus 131 ~~~l~~~v~l~~~~~~~~~~~d~~v~k~ 158 (572)
|.++.|+|+|+++........|..+.+.
T Consensus 231 Gk~~~F~V~v~~i~~~~lpeldDEfak~ 258 (392)
T 1t11_A 231 GKAAKFAIKVNKVEARELPELNDEFVAR 258 (392)
T ss_dssp SCEEEECCCEEEEEEEECCCCSTGGGGG
T ss_pred CCeEEEEEEEEEEEcCCCCCcCHHHHHH
Confidence 7999999999999876666666666653
No 128
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.14 E-value=1.6e-10 Score=125.71 Aligned_cols=116 Identities=7% Similarity=0.021 Sum_probs=106.3
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|++|+..|+++++..+.+. .+++++|.+|..+++|++|+.+++++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 87 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHP---------------EAVARLGRVRWTQQRHAEAAVLLQQASDAA 87 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 56688899999999999999999999999876543 348899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
|++..+++++|.+|..+|++++|++.|+++++++|++..+...+..+...+
T Consensus 88 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 88 PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999988888888776666
No 129
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.13 E-value=5.6e-11 Score=105.27 Aligned_cols=102 Identities=12% Similarity=0.031 Sum_probs=88.0
Q ss_pred HHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHH
Q 008251 420 KRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLD 499 (572)
Q Consensus 420 ~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~ 499 (572)
..|++++.+.|.+ ...++++|.+++..++|++|+..+++++..+|+++.+|+.+|.+|..+|+++
T Consensus 8 ~~~~~al~~~p~~---------------~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~ 72 (148)
T 2vgx_A 8 GTIAMLNEISSDT---------------LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYD 72 (148)
T ss_dssp CSHHHHTTCCHHH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hhHHHHHcCCHhh---------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHH
Confidence 4467777665542 3448899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008251 500 LAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 500 ~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
+|+.+|++++.++|++..+...+..+...+.+..++.
T Consensus 73 ~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~ 109 (148)
T 2vgx_A 73 LAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAE 109 (148)
T ss_dssp HHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999988888888776665555444
No 130
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.13 E-value=1.9e-10 Score=107.50 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=94.3
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|.+|+..|.+++...+... .+++++|.+|..+++|++|+.++++++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---------------~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLA---------------VAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch---------------HHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 35678999999999999999999999999876432 458899999999999999999999999988
Q ss_pred CCCH----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 479 SRNV----------------KALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 479 p~~~----------------ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
|.+. .+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 102 RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 8877 9999999999999999999999999999999873
No 131
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.13 E-value=2.1e-10 Score=122.06 Aligned_cols=122 Identities=16% Similarity=0.023 Sum_probs=109.2
Q ss_pred hhhHHHHHHHHHc---------CcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc--------C
Q 008251 400 GKKKEQGNTLFKA---------GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL--------K 462 (572)
Q Consensus 400 ~~~k~~G~~~~~~---------g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~--------~ 462 (572)
..+...|..++.. |+|++|+..|++|+++.|.+. .+++++|.+|..+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG---------------RSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHHHHhhccccc
Confidence 4567788889998 999999999999999877643 3488999999999 9
Q ss_pred CHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008251 463 DYKQAEKLCTKVLDLDS---RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 463 ~~~~Ai~~~~~al~~~p---~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
+|++|+.+|+++++++| +++.+|+++|.+|..+|++++|+.+|++|++++|++..+...+..+...+.+..+..
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi 312 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLL 312 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999999988888888877766555443
No 132
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.12 E-value=7.4e-10 Score=100.06 Aligned_cols=122 Identities=19% Similarity=0.186 Sum_probs=104.9
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+++.|+..|.++++..+.. ..+++++|.++...+++++|+..++++++.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN---------------VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 3456788889999999999999999999875542 2357899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
|.+..+++.+|.++..+|++++|+..|+++++.+|++..+...+..+.....+..++
T Consensus 107 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 163 (186)
T 3as5_A 107 PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEA 163 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999988888887776665544443
No 133
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.12 E-value=1.8e-11 Score=101.61 Aligned_cols=93 Identities=29% Similarity=0.419 Sum_probs=65.5
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|.+|+..|+++++..|.+. .+++|+|.|++++++|++|+.+|+++++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 68 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP---------------VGYSNKAMALIKLGEYTQAIQMCQQGLRYT 68 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 45566777777777777777777777777655432 336677777777777777777777777777
Q ss_pred CCC------HHHHHHHHHHHHhcCCHHHHHHHHH
Q 008251 479 SRN------VKALYRRAQAYIQMADLDLAEFDIK 506 (572)
Q Consensus 479 p~~------~ka~~~~g~a~~~l~~~~~A~~~~~ 506 (572)
|++ ..+++++|.++..+|++++|+..|+
T Consensus 69 p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 69 STAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp SSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 777 7777777777777777766665554
No 134
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.11 E-value=5.2e-11 Score=132.47 Aligned_cols=126 Identities=14% Similarity=0.090 Sum_probs=73.4
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCC-------------hHHHHHHHH------HHHHhHhhHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG-------------DEEKKQAKA------LKVACNLNNAACKL 459 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~-------------~e~~~~~~~------~~~~~~~nla~~~~ 459 (572)
+..+...|..++..|+|++|+..|+++++..|.+.... ++-....+. -...+++|+|.++.
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~ 512 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAE 512 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 34455566666666666666666666666555432110 000000000 01123567777777
Q ss_pred hcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
++++|++ +.+|++|++++|++..+|+++|.+|..+|++++|+++|++|++++|++..+...+..+
T Consensus 513 ~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 513 LAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVT 577 (681)
T ss_dssp HHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred HcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence 7777777 7777777777777777777777777777777777777777777777766665555544
No 135
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.11 E-value=5.3e-10 Score=108.47 Aligned_cols=75 Identities=13% Similarity=0.043 Sum_probs=57.0
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYK 523 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~ 523 (572)
.+++++|.++..++++++|+.+++++++.+|++..+++.+|.+|..+|++++|+..|+++++++|.+..+...+.
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 346677777777777777777777777777777777777777777777777777777777777777766666666
No 136
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.11 E-value=3.3e-10 Score=120.44 Aligned_cols=115 Identities=16% Similarity=-0.007 Sum_probs=106.1
Q ss_pred HhhhHHHHHHHHHcCcH-HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 399 AGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
+..+...|..++..|+| ++|+..|++|+++.|.+. .+++++|.||+++++|++|+.+|++++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELV---------------EAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 56688999999999999 999999999999877543 35889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQM---------ADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l---------~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
+|+ ..+++++|.+|..+ +++++|+..|++|++++|++..+...+..+...+
T Consensus 167 ~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 167 CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999 79999999999999 9999999999999999999999988888887666
No 137
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.10 E-value=7.1e-10 Score=106.19 Aligned_cols=137 Identities=19% Similarity=0.210 Sum_probs=111.2
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCC-----h------HHHHHHHHHHHHhHhhHHHHHHhcCCHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG-----D------EEKKQAKALKVACNLNNAACKLKLKDYKQA 467 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~-----~------e~~~~~~~~~~~~~~nla~~~~k~~~~~~A 467 (572)
+..+...|..++..|++++|+..|.+++.+.+...... . +...........+++++|.+++..++|++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 67788999999999999999999999998654311000 0 000001223456788999999999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 468 EKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 468 i~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
+..++++++.+|+++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+...+.+..++
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999999999999999999999999999988888888776666554443
No 138
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.09 E-value=1.3e-10 Score=129.38 Aligned_cols=89 Identities=13% Similarity=0.016 Sum_probs=78.1
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
...+++++|.+++.+++|++|+.+|++|++++|++..+++++|.+|..+|++++ +.+|++|++++|++..+...+..+.
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~ 544 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARAR 544 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHH
Confidence 345788999999999999999999999999999999999999999999999999 9999999999999988888888876
Q ss_pred HHHHHHHHHH
Q 008251 527 EKMKEYNKKE 536 (572)
Q Consensus 527 ~~~~~~~~~~ 536 (572)
..+.+.+++.
T Consensus 545 ~~~g~~~~A~ 554 (681)
T 2pzi_A 545 SAEGDRVGAV 554 (681)
T ss_dssp HHTTCHHHHH
T ss_pred HHcCCHHHHH
Confidence 6665554443
No 139
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.08 E-value=6.1e-10 Score=93.44 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Q 008251 417 RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA 496 (572)
Q Consensus 417 ~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~ 496 (572)
.|+..|.++++..|.+. .+++++|.+|+.+++|++|+.+|+++++++|++..+++++|.+|..+|
T Consensus 3 ~a~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLAQGTDNM---------------LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHTTTCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 57889999998776543 348899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHH
Q 008251 497 DLDLAEFDIKKALEIDPD--NRDVKLEYKTLKE 527 (572)
Q Consensus 497 ~~~~A~~~~~~al~l~P~--~~~~~~~l~~l~~ 527 (572)
++++|+..|+++++++|+ +......+..+..
T Consensus 68 ~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~ 100 (115)
T 2kat_A 68 DRAGARQAWESGLAAAQSRGDQQVVKELQVFLR 100 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 999999999999999885 3344444444333
No 140
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.08 E-value=5.8e-10 Score=100.76 Aligned_cols=122 Identities=21% Similarity=0.261 Sum_probs=107.0
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|++.+|+..|++++...+.. ..+++++|.++...+++++|+..++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 71 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD---------------VDVALHLGIAYVKTGAVDRGTELLERSLAD 71 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 35678889999999999999999999998775542 245789999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNK 534 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~ 534 (572)
+|++..+++.+|.++...+++++|+..|+++++++|.+..+...+..+.....+..+
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 128 (186)
T 3as5_A 72 APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDE 128 (186)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHH
Confidence 999999999999999999999999999999999999998887777776555544443
No 141
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.08 E-value=2e-09 Score=112.67 Aligned_cols=121 Identities=25% Similarity=0.355 Sum_probs=106.7
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
......|..++..|++.+|+..|++++...+.+. .....++.++|.++.+++++++|+..|+++++.+|
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p 326 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSIA-----------EYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP 326 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcch-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 3445669999999999999999999999766522 22345688999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 008251 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 531 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~ 531 (572)
+++.+|+.+|.+|..+|++++|+.+|+++++++|++..+...+..+...++.
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999998888877665543
No 142
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.07 E-value=9.9e-10 Score=110.54 Aligned_cols=111 Identities=26% Similarity=0.282 Sum_probs=101.2
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|.+|+..|.++++..|... .+++++|.|++.+++|++|+..++++++.+
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNY---------------IAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999876532 358899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP---DNRDVKLEYKT 524 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P---~~~~~~~~l~~ 524 (572)
|++..+++.+|.+|..+|++++|+..|+++++++| ++..+...+..
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVK 116 (359)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHH
Confidence 99999999999999999999999999999999999 88777766643
No 143
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.06 E-value=1.4e-09 Score=103.31 Aligned_cols=110 Identities=16% Similarity=0.226 Sum_probs=58.2
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
..+...|..++..|++.+|+..|.++++..+... .+++++|.++..++++++|+..++++++.+|
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 122 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAA---------------TAYYGAGNVYVVKEMYKEAKDMFEKALRAGM 122 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcch---------------HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 4455666677777777777777777766544321 2244445555555555555555555555555
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008251 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~ 524 (572)
.+..+++.+|.+|..+|++++|+..|+++++++|++..+...+..
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 167 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGM 167 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHH
Confidence 555555555555555555555555555555555544444433333
No 144
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.06 E-value=5.2e-10 Score=96.09 Aligned_cols=69 Identities=20% Similarity=0.295 Sum_probs=65.5
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
..++.|+|.++++.++|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 445779999999999999999999999999999999999999999999999999999999999998874
No 145
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.06 E-value=6.5e-10 Score=112.91 Aligned_cols=123 Identities=12% Similarity=0.098 Sum_probs=100.6
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|+.|+..|++++...+... .+++++|.++.+++++++|+..++++++++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDY---------------LLWNKLGATLANGNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34566788888889999999999999888765432 347889999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN-----------RDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~-----------~~~~~~l~~l~~~~~~~~~~~ 536 (572)
|++..+++++|.+|..+|++++|+..|+++++++|++ ..+...+..+...+.+.+...
T Consensus 282 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 350 (368)
T 1fch_A 282 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYG 350 (368)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHH
Confidence 9999999999999999999999999999999998888 677777777766665544443
No 146
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.06 E-value=2e-09 Score=91.53 Aligned_cols=93 Identities=15% Similarity=0.104 Sum_probs=83.0
Q ss_pred HhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008251 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (572)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~ 530 (572)
++++|.++++.++|++|+..++++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|++..+...+..+.....
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999888888877777
Q ss_pred HHHHHHHHHHHhhh
Q 008251 531 EYNKKEAKFYGNMF 544 (572)
Q Consensus 531 ~~~~~~~~~~~~~f 544 (572)
+..++.. .|.+..
T Consensus 100 ~~~~A~~-~~~~al 112 (121)
T 1hxi_A 100 NANAALA-SLRAWL 112 (121)
T ss_dssp HHHHHHH-HHHHHH
T ss_pred CHHHHHH-HHHHHH
Confidence 6665543 444443
No 147
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.06 E-value=6.7e-11 Score=107.52 Aligned_cols=129 Identities=12% Similarity=0.104 Sum_probs=103.7
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (572)
++...++.++..|+|+.|+..|.+++...|.+. .+++++|.+|+..++|++|+.+++++++++|+
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 76 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIRANPQNS---------------EQWALLGEYYLWQNDYSNSLLAYRQALQLRGE 76 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHHHCCSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 344556667889999999999999999876533 34889999999999999999999999999999
Q ss_pred CHHHHHHHHHH-HHhcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008251 481 NVKALYRRAQA-YIQMADL--DLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (572)
Q Consensus 481 ~~ka~~~~g~a-~~~l~~~--~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~ 545 (572)
++.+++++|.+ +...+++ ++|+..|+++++++|++..+...+..+........++. ..|.+.+.
T Consensus 77 ~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~ 143 (177)
T 2e2e_A 77 NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAI-ELWQKVMD 143 (177)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHH-HHHHHHHh
Confidence 99999999999 8899999 99999999999999999988888887776665555444 33444443
No 148
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.7e-09 Score=92.21 Aligned_cols=89 Identities=20% Similarity=0.198 Sum_probs=80.4
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
...++++|.++++.++|++|+..++++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..+...+..+..
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999888888888776
Q ss_pred HHHHHHHHH
Q 008251 528 KMKEYNKKE 536 (572)
Q Consensus 528 ~~~~~~~~~ 536 (572)
.+.+..++.
T Consensus 84 ~~~~~~~A~ 92 (126)
T 3upv_A 84 AVKEYASAL 92 (126)
T ss_dssp HTTCHHHHH
T ss_pred HHhCHHHHH
Confidence 665555443
No 149
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.05 E-value=1.6e-09 Score=107.29 Aligned_cols=112 Identities=15% Similarity=0.048 Sum_probs=95.7
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc-CCHHHHHHHHHHHH
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-KDYKQAEKLCTKVL 475 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~-~~~~~Ai~~~~~al 475 (572)
..+..+.+.|+.+...|+|++|+..|++|+.+.+..... .....++.|+|.+|..+ +++++|+.+|++|+
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al 145 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF---------RRGANFKFELGEILENDLHDYAKAIDCYELAG 145 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 346778899999999999999999999999987654321 22345688999999996 99999999999999
Q ss_pred hcCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 008251 476 DLDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD 517 (572)
Q Consensus 476 ~~~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~ 517 (572)
++.|.+ ..++.++|.+|..+|+|++|+..|++++++.|++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 146 EWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 998754 578999999999999999999999999999998753
No 150
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.05 E-value=9.7e-10 Score=108.67 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=97.5
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHH---------
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK--------- 469 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~--------- 469 (572)
...+...|..++..|++++|+..|++++...|.+.. +++++|.+++.+|++++|+.
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~---------------a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGE---------------IGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHH---------------HHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchh---------------HHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 356789999999999999999999999999886542 36677777777777666654
Q ss_pred -------------------------HHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 008251 470 -------------------------LCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN--RDVKLEY 522 (572)
Q Consensus 470 -------------------------~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~--~~~~~~l 522 (572)
.++++++.+|+++.+++++|.+|...|++++|+..|.++++++|++ ..++..+
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l 261 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTF 261 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHH
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHH
Confidence 4555577789999999999999999999999999999999999998 6777777
Q ss_pred HHHHHHHHHHHH
Q 008251 523 KTLKEKMKEYNK 534 (572)
Q Consensus 523 ~~l~~~~~~~~~ 534 (572)
..+...+....+
T Consensus 262 ~~~~~~~g~~~~ 273 (287)
T 3qou_A 262 QEILAALGTGDA 273 (287)
T ss_dssp HHHHHHHCTTCH
T ss_pred HHHHHHcCCCCc
Confidence 777666554443
No 151
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.04 E-value=1.2e-09 Score=103.71 Aligned_cols=130 Identities=17% Similarity=0.122 Sum_probs=107.6
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+++.|+..|+++++..+... .+++++|.++.+++++++|+..++++++.+
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 155 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENG---------------DLFYMLGTVLVKLEQPKLALPYLQRAVELN 155 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSH---------------HHHHHHHHHHHHTSCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 34567889999999999999999999998876432 347789999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f 544 (572)
|++..+++.+|.++..+|++++|+..|+++++.+|++..+...+..+.....+..++. ..|++..
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~-~~~~~~~ 220 (243)
T 2q7f_A 156 ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKAL-EMLDKAI 220 (243)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHH-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHH-HHHHHHH
Confidence 9999999999999999999999999999999999999888777777766554444333 2344443
No 152
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.04 E-value=6.8e-10 Score=113.03 Aligned_cols=120 Identities=13% Similarity=0.139 Sum_probs=94.8
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|++|+..|+++++..|.+. .+++++|.++.+++++++|+..++++++++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDY---------------SLWNRLGATLANGDRSEEAVEAYTRALEIQ 277 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 34566788888888999999999998888766432 347889999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------------HHHHHHHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------------RDVKLEYKTLKEKMKEYN 533 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~------------~~~~~~l~~l~~~~~~~~ 533 (572)
|+++.+++++|.+|..+|++++|+..|+++++++|++ ..+...+..+...+.+.+
T Consensus 278 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 278 PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHH
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHH
Confidence 9999999999999999999999999999999988874 344555555554444433
No 153
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.9e-09 Score=114.58 Aligned_cols=106 Identities=30% Similarity=0.320 Sum_probs=98.7
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
+.+.+..++..|+.+++.|+|.+|+..|++++...|. ..+++++|.|++++++|++|+.+|+++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED----------------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc----------------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 4567899999999999999999999999999998752 245889999999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 475 LDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 475 l~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
++.+|++..+++.+|.+|..+|++++|+..|+++++++|.+.
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999764
No 154
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.03 E-value=2.3e-09 Score=106.27 Aligned_cols=110 Identities=17% Similarity=0.084 Sum_probs=62.8
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHH----HHhcCCHHHHHHHHHHHH
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAAC----KLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~----~~k~~~~~~Ai~~~~~al 475 (572)
..+...|..+.+.|++++|+..|+++++..|... ..+++.+ +...+++++|+..+++++
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~-----------------~~~l~~a~~~l~~~~~~~~eA~~~~~~~l 193 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT-----------------LTQLATAWVSLAAGGEKLQDAYYIFQEMA 193 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----------------HHHHHHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH-----------------HHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 4566678888888888888888888887754321 1122211 112245555555555555
Q ss_pred hcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 476 DLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 476 ~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
+.+|+++.+++.+|.+|.++|++++|+..|+++++++|++.++...+..+.
T Consensus 194 ~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~ 244 (291)
T 3mkr_A 194 DKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLS 244 (291)
T ss_dssp HHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 555555555555555555555555555555555555555555544444433
No 155
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.03 E-value=3.1e-10 Score=99.33 Aligned_cols=88 Identities=8% Similarity=0.041 Sum_probs=80.1
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~ 528 (572)
..++++|.++++.++|++|+..+++++..+|+++.+|+.+|.+|..+|++++|+.+|++++.++|++..+...+..+...
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 44789999999999999999999999999999999999999999999999999999999999999999988888888776
Q ss_pred HHHHHHHH
Q 008251 529 MKEYNKKE 536 (572)
Q Consensus 529 ~~~~~~~~ 536 (572)
+.+..++.
T Consensus 99 ~g~~~~A~ 106 (142)
T 2xcb_A 99 LGDLDGAE 106 (142)
T ss_dssp TTCHHHHH
T ss_pred cCCHHHHH
Confidence 66555444
No 156
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.03 E-value=2.3e-09 Score=88.58 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=65.1
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
..++++|.+++..++|++|+..++++++++|+++.+++++|.+|..+|++++|+.+|+++++++|++
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 4578999999999999999999999999999999999999999999999999999999999999998
No 157
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.02 E-value=2.3e-09 Score=102.79 Aligned_cols=80 Identities=16% Similarity=0.018 Sum_probs=48.1
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
+++++|.++.+++++++|+..++++++.+|.+..+++.+|.+|..+|++++|+..|+++++.+|.+..+...+..+....
T Consensus 143 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (252)
T 2ho1_A 143 VFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVF 222 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHc
Confidence 45556666666666666666666666666666666666666666666666666666666666666655555444444433
No 158
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.02 E-value=7.8e-10 Score=112.56 Aligned_cols=127 Identities=9% Similarity=0.017 Sum_probs=102.7
Q ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH
Q 008251 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK 483 (572)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k 483 (572)
..|..+...|++.+|+..|.+++...|.... ..+++++|.++..++++++|+..++++++.+|+++.
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~-------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 248 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAHQNGDMID-------------PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYS 248 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHHHSCSSCC-------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhCcCccC-------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH
Confidence 3488899999999999999999998775221 235889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008251 484 ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (572)
Q Consensus 484 a~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f 544 (572)
+|+++|.+|..+|++++|+..|+++++++|++..+...+..+...+.+..++. ..|.+..
T Consensus 249 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~-~~~~~al 308 (365)
T 4eqf_A 249 LWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAV-SNFLTAL 308 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHH-HHHHHHH
Confidence 99999999999999999999999999999999888888888766665544433 3344443
No 159
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.02 E-value=2.7e-09 Score=99.79 Aligned_cols=87 Identities=15% Similarity=0.034 Sum_probs=68.1
Q ss_pred HhHhhHHHHHHhc-CCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 449 ACNLNNAACKLKL-KDYKQAEKLCTKVLD--LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 449 ~~~~nla~~~~k~-~~~~~Ai~~~~~al~--~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
.+++++|.++... +++++|+..++++++ .+|.+..+++.+|.++..+|++++|+..|+++++.+|++..+...+..+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 156 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELART 156 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 3567888888888 888888888888888 5666678888888888888888888888888888888887777777766
Q ss_pred HHHHHHHHHH
Q 008251 526 KEKMKEYNKK 535 (572)
Q Consensus 526 ~~~~~~~~~~ 535 (572)
.....+..++
T Consensus 157 ~~~~~~~~~A 166 (225)
T 2vq2_A 157 KMLAGQLGDA 166 (225)
T ss_dssp HHHHTCHHHH
T ss_pred HHHcCCHHHH
Confidence 6555544443
No 160
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.02 E-value=3.2e-09 Score=99.24 Aligned_cols=117 Identities=18% Similarity=0.125 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHc-CcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 401 KKKEQGNTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 401 ~~k~~G~~~~~~-g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
.+...|..++.. |++++|+..|++++. .+.... ...+++++|.++.+++++++|+..++++++.+|
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~------------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 144 (225)
T 2vq2_A 78 INNNYGWFLCGRLNRPAESMAYFDKALA-DPTYPT------------PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQP 144 (225)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHT-STTCSC------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHc-CcCCcc------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 344555555555 666666666665555 111110 235688999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHH
Q 008251 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP-DNRDVKLEYKTLKEKMK 530 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P-~~~~~~~~l~~l~~~~~ 530 (572)
++..+++.+|.++..+|++++|+..|+++++++| .+..+...+..+.....
T Consensus 145 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (225)
T 2vq2_A 145 QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALG 196 (225)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999 88777666555544433
No 161
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.02 E-value=3.6e-09 Score=84.00 Aligned_cols=80 Identities=33% Similarity=0.411 Sum_probs=74.1
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
..+++++|.++...++|++|+.+++++++.+|++..+++++|.+|..++++++|+..|+++++++|++..+...+..+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999888777776643
No 162
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.02 E-value=2.9e-09 Score=103.25 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=100.6
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|++|+..|.++++..+... .++.++|.+|..+++|++|+.+++++++.+
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 138 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL---------------DMYGQIGSYFYNKGNFPLAIQYMEKQIRPT 138 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT---------------HHHHHHHHHHHHTTCHHHHHHHHGGGCCSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHhhcC
Confidence 34467899999999999999999999999877644 248899999999999999999999999999
Q ss_pred CCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRA-QAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (572)
Q Consensus 479 p~~~ka~~~~g-~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~ 530 (572)
|+++.+++++| .+|. .+++++|+..|+++++++|++..+...+..+...+.
T Consensus 139 ~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 139 TTDPKVFYELGQAYYY-NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp CCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 99999999999 5555 559999999999999999999877777766655443
No 163
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.01 E-value=1e-09 Score=117.53 Aligned_cols=116 Identities=25% Similarity=0.358 Sum_probs=99.2
Q ss_pred ccCCChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHH
Q 008251 387 SWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ 466 (572)
Q Consensus 387 ~~~~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~ 466 (572)
...++.+++...+..+...|+.+++.|+|.+|+..|++++...|.+. .+++++|.||+++++|++
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~~~~~g~~~~ 77 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEP---------------VFYSNISACYISTGDLEK 77 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCc---------------HHHHHHHHHHHHcCCHHH
Confidence 34567888889999999999999999999999999999999877543 458899999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 008251 467 AEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDV 518 (572)
Q Consensus 467 Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~ 518 (572)
|+..|+++++++|+++.+++++|.+|..+|++++|+..|+ ++.++|+....
T Consensus 78 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~ 128 (537)
T 3fp2_A 78 VIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDGA 128 (537)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC--------
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCChH
Confidence 9999999999999999999999999999999999999996 89999987543
No 164
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.01 E-value=3.5e-09 Score=100.40 Aligned_cols=124 Identities=10% Similarity=0.035 Sum_probs=100.7
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh------------------c
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK------------------L 461 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k------------------~ 461 (572)
..+...|..+++.|+|.+|+..|+++++..|.+... ..+++++|.|+.+ +
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~------------~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 109 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI------------DYVMYMRGLTNMALDDSALQGFFGVDRSDRDP 109 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH------------HHHHHHHHHHHHHHHC--------------CC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH------------HHHHHHHHHHHHhhhhhhhhhhhccchhhcCc
Confidence 457788999999999999999999999998875532 2246677777765 6
Q ss_pred CCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---HHHHH
Q 008251 462 KDYKQAEKLCTKVLDLDSRNVKAL-----------------YRRAQAYIQMADLDLAEFDIKKALEIDPDNR---DVKLE 521 (572)
Q Consensus 462 ~~~~~Ai~~~~~al~~~p~~~ka~-----------------~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~---~~~~~ 521 (572)
+++++|+..++++++.+|++..++ +.+|.+|...|++++|+..|+++++..|++. ++...
T Consensus 110 ~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 189 (225)
T 2yhc_A 110 QQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPL 189 (225)
T ss_dssp HHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHH
Confidence 799999999999999999987554 6789999999999999999999999999986 34555
Q ss_pred HHHHHHHHHHHHHH
Q 008251 522 YKTLKEKMKEYNKK 535 (572)
Q Consensus 522 l~~l~~~~~~~~~~ 535 (572)
+..+...+....++
T Consensus 190 l~~~~~~~g~~~~A 203 (225)
T 2yhc_A 190 MENAYRQMQMNAQA 203 (225)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCcHHH
Confidence 55555555544444
No 165
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.01 E-value=3.7e-09 Score=110.58 Aligned_cols=112 Identities=26% Similarity=0.270 Sum_probs=101.5
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..+++.|+|.+|+..|+++++..|.+ ..+++++|.|++.++++++|+..++++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 88 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVIQ 88 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 457788999999999999999999999999876643 34588999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---HHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR---DVKLEYK 523 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~---~~~~~l~ 523 (572)
.+|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...+.
T Consensus 89 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 138 (450)
T 2y4t_A 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLI 138 (450)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Confidence 9999999999999999999999999999999999999987 6655543
No 166
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.01 E-value=1.8e-09 Score=106.96 Aligned_cols=112 Identities=24% Similarity=0.263 Sum_probs=91.5
Q ss_pred HHhhhHHHHHHHHHc-CcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 398 AAGKKKEQGNTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~-g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
.+..+...|..+... |+|++|+..|++|+++.+..... .....++.++|.++.++++|++|+.+|+++++
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~---------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV---------ALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 356788899999996 99999999999999998754321 12345688999999999999999999999999
Q ss_pred cCCCCHH-------HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 008251 477 LDSRNVK-------ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDV 518 (572)
Q Consensus 477 ~~p~~~k-------a~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~ 518 (572)
+.|++.. +++++|.||..+|++++|+..|+++++++|+....
T Consensus 187 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 187 SSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp TTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 9987642 78999999999999999999999999999997543
No 167
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.00 E-value=1.8e-09 Score=98.10 Aligned_cols=70 Identities=16% Similarity=0.095 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHHHHHH
Q 008251 465 KQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN--RDVKLEYKTLKEKMKEYNK 534 (572)
Q Consensus 465 ~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~--~~~~~~l~~l~~~~~~~~~ 534 (572)
..|+..++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+. ..+...+..+...+.+..+
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 162 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNA 162 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCc
Confidence 346777777888889999999999999999999999999999999999875 4477777766665544433
No 168
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.99 E-value=1.8e-09 Score=103.56 Aligned_cols=137 Identities=16% Similarity=0.125 Sum_probs=88.7
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCC-------------ChHHHHHHHH------HHHHhHhhHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQAKA------LKVACNLNNAACKL 459 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~~~~------~~~~~~~nla~~~~ 459 (572)
+..+...|..++..|+|++|+..|.+++...+..... ..+-...... ....+++++|.++.
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 4555666666666666666666666666554322100 0000000000 01245678888888
Q ss_pred hcCCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 460 KLKDYKQAEKLCTKVLD--LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 460 k~~~~~~Ai~~~~~al~--~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
.++++++|+..+++++. .+|.+..+++.+|.+|..+|++++|+..|+++++++|.+..+...+..+...+.+..++
T Consensus 117 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 194 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPA 194 (252)
T ss_dssp HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHH
Confidence 88888888888888888 77778888888888888888888888888888888888877776666665555444433
No 169
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.99 E-value=2.2e-09 Score=94.92 Aligned_cols=89 Identities=16% Similarity=0.186 Sum_probs=77.8
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC-------CHH-----HHHHHHHHHHhcCCHHHHHHHHHHHHHh----
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR-------NVK-----ALYRRAQAYIQMADLDLAEFDIKKALEI---- 511 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~-------~~k-----a~~~~g~a~~~l~~~~~A~~~~~~al~l---- 511 (572)
...+.++|.+++++++|++|+..|++||+++|+ +.. +|+++|.|+..+|+|++|+.+|.+|+++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 445789999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ---CCCCHHHH----HHHHHHHHHHHHHHHHH
Q 008251 512 ---DPDNRDVK----LEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 512 ---~P~~~~~~----~~l~~l~~~~~~~~~~~ 536 (572)
+|++..+. .....+...+.+.+++.
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl 122 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAM 122 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHH
Confidence 99997777 67676666666665554
No 170
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.99 E-value=3.6e-09 Score=94.79 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=80.4
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
...++++|.++++.++|++|+..|+++++++|+++.+|+++|.+|..+++|++|+.+|+++++++|++..+...+..+..
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999988888888776
Q ss_pred HHHHHHHHH
Q 008251 528 KMKEYNKKE 536 (572)
Q Consensus 528 ~~~~~~~~~ 536 (572)
.+.+..++.
T Consensus 91 ~~g~~~~A~ 99 (164)
T 3sz7_A 91 DMADYKGAK 99 (164)
T ss_dssp HTTCHHHHH
T ss_pred HccCHHHHH
Confidence 665554443
No 171
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.98 E-value=3.2e-09 Score=90.18 Aligned_cols=101 Identities=32% Similarity=0.416 Sum_probs=91.1
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
..+...|..++..|+++.|+..|.+++...+.. ..+++++|.++...+++++|+..+++++...|
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 345678899999999999999999999876542 23477999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
.+..+++.+|.++..+|++++|+..|++++.++|++
T Consensus 101 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 101 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999874
No 172
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.98 E-value=6.2e-09 Score=105.56 Aligned_cols=145 Identities=10% Similarity=0.019 Sum_probs=112.8
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCCh----------------------------HHHHHHHH-----
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD----------------------------EEKKQAKA----- 445 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~----------------------------e~~~~~~~----- 445 (572)
+..+...|..++..|++.+|+..|.+++...+....... +-......
T Consensus 132 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 211 (368)
T 1fch_A 132 QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLD 211 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhC
Confidence 345677888888888899999888888887665432211 00000010
Q ss_pred -H--HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008251 446 -L--KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEY 522 (572)
Q Consensus 446 -~--~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 522 (572)
. ...+++++|.++.+.++|++|+..++++++.+|+++.+++++|.+|..+|++++|+..|+++++++|++..+...+
T Consensus 212 p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l 291 (368)
T 1fch_A 212 PTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNL 291 (368)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 1 3467889999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 008251 523 KTLKEKMKEYNKKEAKFYGNMF 544 (572)
Q Consensus 523 ~~l~~~~~~~~~~~~~~~~~~f 544 (572)
..+...+.+..++. ..|.+..
T Consensus 292 ~~~~~~~g~~~~A~-~~~~~al 312 (368)
T 1fch_A 292 GISCINLGAHREAV-EHFLEAL 312 (368)
T ss_dssp HHHHHHHTCHHHHH-HHHHHHH
T ss_pred HHHHHHCCCHHHHH-HHHHHHH
Confidence 88877666555444 2344443
No 173
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.98 E-value=7.1e-09 Score=103.10 Aligned_cols=134 Identities=9% Similarity=-0.058 Sum_probs=86.2
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCCh-------------HHHHHHHH------HHHHhHhhHHHHHHhc
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD-------------EEKKQAKA------LKVACNLNNAACKLKL 461 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~-------------e~~~~~~~------~~~~~~~nla~~~~k~ 461 (572)
.+...|..++..|+|..|+..|+++++..|....... +-...... ....+++++|.++..+
T Consensus 24 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (330)
T 3hym_B 24 VVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMV 103 (330)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 4556777777788888888888888777665543310 00000000 1123466777777777
Q ss_pred C-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q 008251 462 K-DYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNK 534 (572)
Q Consensus 462 ~-~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~ 534 (572)
+ ++++|+.+++++++.+|++..+++.+|.+|..+|++++|+..|++++++.|++..+...+..+.....+..+
T Consensus 104 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (330)
T 3hym_B 104 GHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKL 177 (330)
T ss_dssp CSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHH
T ss_pred hhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHH
Confidence 7 777777777777777777777777777777777777777777777777777766666666555554444433
No 174
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=3.2e-09 Score=109.06 Aligned_cols=144 Identities=16% Similarity=0.069 Sum_probs=99.3
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCC-------------ChHHHHHHH------HHHHHhHhhHHHHHHh
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQAK------ALKVACNLNNAACKLK 460 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~~~------~~~~~~~~nla~~~~k 460 (572)
..+...|..+...|++.+|+..|+++++..|..... .++-..... .....+++++|.++.+
T Consensus 170 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 249 (388)
T 1w3b_A 170 VAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYE 249 (388)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHH
Confidence 445677788888888888888888888766543210 011111111 1123567788888888
Q ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008251 461 LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFY 540 (572)
Q Consensus 461 ~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~ 540 (572)
++++++|+..++++++.+|+++.+++.+|.+|..+|++++|+..|+++++++|++..+...+..+.....+..++. ..|
T Consensus 250 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~-~~~ 328 (388)
T 1w3b_A 250 QGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV-RLY 328 (388)
T ss_dssp TTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH-HHH
T ss_pred cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHH-HHH
Confidence 8888888888888888888888888888888888888888888888888888888777777776655554444433 344
Q ss_pred Hhhh
Q 008251 541 GNMF 544 (572)
Q Consensus 541 ~~~f 544 (572)
.++.
T Consensus 329 ~~al 332 (388)
T 1w3b_A 329 RKAL 332 (388)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 4444
No 175
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.97 E-value=2.8e-09 Score=105.90 Aligned_cols=123 Identities=20% Similarity=0.201 Sum_probs=106.7
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|++++|+..|.+++...+... .++.++|.++..++++++|+..++++++.+
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDA---------------QLWNKLGATLANGNRPQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 34567889999999999999999999998866432 347899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHHHHHHHHH
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD------------NRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~------------~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
|++..+++.+|.+|..+|++++|+..|+++++++|+ +..+...+..+...+.+.+.+.
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 306 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVE 306 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHH
Confidence 999999999999999999999999999999999999 6777777777766665554443
No 176
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.97 E-value=2.6e-09 Score=109.66 Aligned_cols=129 Identities=15% Similarity=0.116 Sum_probs=100.6
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (572)
.+...|..++..|++++|+..|+++++..|.. ..+++++|.++.+.+++++|+..++++++.+|+
T Consensus 239 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 303 (388)
T 1w3b_A 239 VHGNLACVYYEQGLIDLAIDTYRRAIELQPHF---------------PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 303 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC---------------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc
Confidence 34455555556666666666666665544332 245889999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008251 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~ 545 (572)
++.+++++|.++...|++++|+..|+++++++|++..+...+..+.....+.+++. ..|.++..
T Consensus 304 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~-~~~~~a~~ 367 (388)
T 1w3b_A 304 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEAL-MHYKEAIR 367 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHH-HHHHHHHT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHH-HHHHHHHh
Confidence 99999999999999999999999999999999999888888887766655544443 34555543
No 177
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.95 E-value=6.1e-09 Score=100.86 Aligned_cols=132 Identities=23% Similarity=0.210 Sum_probs=107.5
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|.+|+..|.+++++........ ......++.++|.++..+++|++|+.++.+++.
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 113 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 113 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3567788999999999999999999999998864321100 123456789999999999999999999999998
Q ss_pred c--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 477 L--------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI--------DPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 477 ~--------~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l--------~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
+ +|....+++++|.+|..+|++++|+..|++++++ .|....+...+..+...+.+.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 188 (283)
T 3edt_B 114 IREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDA 188 (283)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 8 5777899999999999999999999999999999 666656666677666655554443
No 178
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.95 E-value=4.9e-09 Score=104.30 Aligned_cols=131 Identities=18% Similarity=0.080 Sum_probs=111.0
Q ss_pred hhhHHHHHHHHHcC-cHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 400 GKKKEQGNTLFKAG-KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 400 ~~~k~~G~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
..+...|..++..| +++.|+..|.+++...+... .+++++|.++..++++++|+..++++++.+
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 155 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYG---------------PAWIAYGHSFAVESEHDQAMAAYFTAAQLM 155 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCT---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHhc
Confidence 45678899999999 99999999999998776543 238899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~~ 546 (572)
|++..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+.....+..++. ..+.+....
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~-~~~~~a~~~ 222 (330)
T 3hym_B 156 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAE-KWFLDALEK 222 (330)
T ss_dssp TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHH-HHHHHHHHH
Confidence 9999999999999999999999999999999999999888888887766665555443 334444443
No 179
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.93 E-value=5.1e-09 Score=85.67 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=63.9
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
.+++++|.+|+++++|++|+.+++++++++|+++.+|+++|.+|..+|++++|+..|++++++.|.+
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4588999999999999999999999999999999999999999999999999999999999998754
No 180
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.93 E-value=1.2e-08 Score=89.53 Aligned_cols=109 Identities=18% Similarity=0.132 Sum_probs=94.1
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+..+...|..++..|+|+.|+..|.+++.+.+..... .....+++++|.++..+++|++|+.++++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK---------AAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCc---------hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3457788999999999999999999999999987754321 3345678899999999999999999999999
Q ss_pred hcCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008251 476 DLDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (572)
Q Consensus 476 ~~~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P 513 (572)
++.+.. ..+++++|.++..++++++|+..+++++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 876543 67899999999999999999999999998743
No 181
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.91 E-value=1e-08 Score=101.53 Aligned_cols=98 Identities=13% Similarity=0.062 Sum_probs=87.4
Q ss_pred HHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 008251 409 LFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRR 488 (572)
Q Consensus 409 ~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~ 488 (572)
+...|++++|+..|+++++..|.+. .+++++|.|+.++|+|++|+..++++++.+|+++.+++++
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~~~---------------~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l 240 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSPTL---------------LLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINL 240 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3345899999999999999866532 4588999999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHH-HHHHHHHHHHhCCCCHHHHHH
Q 008251 489 AQAYIQMADLDL-AEFDIKKALEIDPDNRDVKLE 521 (572)
Q Consensus 489 g~a~~~l~~~~~-A~~~~~~al~l~P~~~~~~~~ 521 (572)
|.++..+|++++ |..+++++++++|++..+...
T Consensus 241 ~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 241 VVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 999999999976 578999999999999877654
No 182
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.89 E-value=9e-09 Score=83.47 Aligned_cols=69 Identities=20% Similarity=0.299 Sum_probs=66.0
Q ss_pred HhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 008251 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK-ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVK 519 (572)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k-a~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~ 519 (572)
.+++|.++++.++|++|+..|+++++.+|+++. +++++|.+|..+|++++|+.+|+++++++|++..+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 468999999999999999999999999999999 999999999999999999999999999999997765
No 183
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.89 E-value=1.3e-08 Score=87.57 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=80.7
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
...++++|.++++.++|+.|+..+++++..+|+++.+++++|.+|..++++++|+.+|+++++++|++..+...+..+..
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999988888888877
Q ss_pred HHHHHHHHH
Q 008251 528 KMKEYNKKE 536 (572)
Q Consensus 528 ~~~~~~~~~ 536 (572)
.+.+...+.
T Consensus 89 ~~~~~~~A~ 97 (137)
T 3q49_B 89 EMESYDEAI 97 (137)
T ss_dssp HTTCHHHHH
T ss_pred HHhhHHHHH
Confidence 665555443
No 184
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.89 E-value=1.1e-08 Score=101.21 Aligned_cols=107 Identities=16% Similarity=0.138 Sum_probs=91.9
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|+.|+..|++|++........ ......+++|+|.+|.++++|++|+.++++++++
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc--------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35568899999999999999999999999877654222 2455668999999999999999999999999987
Q ss_pred CCCC------HHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhC
Q 008251 478 DSRN------VKALYRRAQAYIQMA-DLDLAEFDIKKALEID 512 (572)
Q Consensus 478 ~p~~------~ka~~~~g~a~~~l~-~~~~A~~~~~~al~l~ 512 (572)
.+.. ..+|+++|.+|..+| .+++|+.+|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 6543 789999999999999 5799999999999764
No 185
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.89 E-value=1e-08 Score=99.25 Aligned_cols=117 Identities=12% Similarity=-0.021 Sum_probs=98.7
Q ss_pred HHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q 008251 408 TLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYR 487 (572)
Q Consensus 408 ~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~ 487 (572)
.+...++|++|+..|+++++..+.. ......+++++|.++..+++|++|+..++++++.+|+++.+++.
T Consensus 14 ~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 82 (275)
T 1xnf_A 14 PLQPTLQQEVILARMEQILASRALT-----------DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNY 82 (275)
T ss_dssp CCCCCHHHHHHHHHHHHHHTSSCCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccCccchHHHHHHHHHHHHhccccc-----------CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 3445689999999999999863211 12235568899999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 488 RAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 488 ~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
+|.+|..+|++++|+..|+++++++|++..+...+..+.....+..++
T Consensus 83 la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A 130 (275)
T 1xnf_A 83 LGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLA 130 (275)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHH
Confidence 999999999999999999999999999988888887776655544433
No 186
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.88 E-value=2e-08 Score=103.12 Aligned_cols=127 Identities=14% Similarity=0.094 Sum_probs=95.5
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|..|+..|.+|+++.+..... ......+++++|.+|..+++|++|+.+++++++
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456778888888888999999999999998887765431 123456788889999999999999999988887
Q ss_pred cCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHHHH
Q 008251 477 LDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALE-----ID-PDNRDVKLEYKTLKEKMKE 531 (572)
Q Consensus 477 ~~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~-----l~-P~~~~~~~~l~~l~~~~~~ 531 (572)
+.+.. ..+++++|.+|..+|++++|+.+|++|++ .+ |....+...++.+...+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 279 (383)
T 3ulq_A 213 MAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGK 279 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCC
Confidence 75433 35888899999999999999999988888 35 5555555566655444433
No 187
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.87 E-value=4.2e-09 Score=109.44 Aligned_cols=85 Identities=15% Similarity=0.268 Sum_probs=76.7
Q ss_pred CCCCCCCeEEEEEEEEeCCCeEeeec--cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCC
Q 008251 167 ENPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGA 244 (572)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ 244 (572)
..+..||.|++||.+.. +|+.|+++ .|+.|.+|.|+++|||+++|.||++|+++.|.+|+..+||..+.
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-------- 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-------- 226 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCCCSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT--------
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCCccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC--------
Confidence 45789999999999995 89999976 89999999999999999999999999999999999999996543
Q ss_pred CCCCCeEEEEEEEecccc
Q 008251 245 VPPNATLQIALELVSWKT 262 (572)
Q Consensus 245 ip~~~~l~~~v~l~~~~~ 262 (572)
++.+++|+|+|.++..
T Consensus 227 --ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 227 --KGKAAKFAINLKKVEE 242 (432)
T ss_dssp --SSCEEEEEEECCEECC
T ss_pred --CCceEEEEEEEEEEec
Confidence 6789999999999764
No 188
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.87 E-value=1.1e-09 Score=89.05 Aligned_cols=92 Identities=12% Similarity=0.035 Sum_probs=80.7
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCC
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN 481 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~ 481 (572)
...+|..++..|+|.+|+..|+++++..|.+.. .+++++|.||..+++|++|+.+++++++++|++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~--------------~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKD--------------EAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHH--------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH--------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 457899999999999999999999998765321 158899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
..++++ +.+.+|+..|+++..++|++
T Consensus 69 ~~~~~~--------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 69 PALQAR--------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp THHHHH--------HHHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHH--------HHHHHHHHHHHHHhccCccc
Confidence 998865 66788999999998888876
No 189
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.86 E-value=1e-08 Score=107.99 Aligned_cols=124 Identities=15% Similarity=0.042 Sum_probs=98.2
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|++|+..|++|+++.+...... ...-...++.|+|.+|..+|+|++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~------~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~ 124 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQ------AEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVC 124 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGG------CTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccc------cchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 44567889999999999999999999999865432100 001124458899999999999999999999998763
Q ss_pred --------CCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008251 479 --------SRNVKALYRRAQAYIQMA--DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 479 --------p~~~ka~~~~g~a~~~l~--~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~ 528 (572)
+..+.++.++|.++..++ +|++|+.+|++|++++|++.++...+..+...
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~ 184 (472)
T 4g1t_A 125 EKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYR 184 (472)
T ss_dssp HHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 456789999998887764 69999999999999999998887777665433
No 190
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2.1e-08 Score=106.48 Aligned_cols=118 Identities=17% Similarity=0.142 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh---cCCHHHHHHHHHHHHhc
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK---LKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k---~~~~~~Ai~~~~~al~~ 477 (572)
.+...|..++..|++++|+..|.+++...+....... ...+++++|.++.. ++++++|+..++++++.
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~ 444 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYV---------GIAPLVGKATLLTRNPTVENFIEATNLLEKASKL 444 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSS---------CSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHH---------HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh
Confidence 4566788888888888888888888887776543100 01258899999999 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
+|++..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+..
T Consensus 445 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 445 DPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEA 494 (514)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888777655433
No 191
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.86 E-value=8.6e-09 Score=101.90 Aligned_cols=123 Identities=14% Similarity=0.072 Sum_probs=97.7
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc-
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL- 477 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~- 477 (572)
+..+...|..++..++|+.|+..|.+|+.+....... .....+++|+|.+|..+++|++|+.+++++++.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4455568888888999999999999999865443332 123456899999999999999999999999952
Q ss_pred ------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHH
Q 008251 478 ------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMK 530 (572)
Q Consensus 478 ------~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~l~~~~~ 530 (572)
.+....+++++|.+|..+|+|++|+..+++|+++.+.. ..+...++.+...+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 23346799999999999999999999999999987554 456666666666555
No 192
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.85 E-value=5.7e-09 Score=113.42 Aligned_cols=110 Identities=16% Similarity=0.102 Sum_probs=80.9
Q ss_pred cCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 008251 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA 491 (572)
Q Consensus 412 ~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a 491 (572)
.|++++|+..|+++++..+.+. .+++++|.++..+++|++|+..++++++++|++..+++++|.+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 66 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDF---------------VAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRV 66 (568)
T ss_dssp -------------------CCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4789999999999998876533 3488999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008251 492 YIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 492 ~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
|..+|++++|+..|+++++++|++..+...+..+...+.+.+++.
T Consensus 67 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~ 111 (568)
T 2vsy_A 67 RWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAA 111 (568)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999999999988888887766655554443
No 193
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.85 E-value=4.5e-08 Score=97.05 Aligned_cols=137 Identities=11% Similarity=0.057 Sum_probs=109.5
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCCh------------------------HHHHH----HHHH----
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD------------------------EEKKQ----AKAL---- 446 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~------------------------e~~~~----~~~~---- 446 (572)
...+...|..++..|++.+|+..|.++++..+....... ....+ ....
T Consensus 89 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 168 (327)
T 3cv0_A 89 IAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMN 168 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhC
Confidence 345677899999999999999999999987665432210 01111 1111
Q ss_pred --HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008251 447 --KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (572)
Q Consensus 447 --~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~ 524 (572)
...+++++|.++.+++++++|+..++++++.+|++..+++.+|.+|..+|++++|+..|+++++++|++..+...+..
T Consensus 169 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 248 (327)
T 3cv0_A 169 PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAV 248 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 245688999999999999999999999999999999999999999999999999999999999999999888888877
Q ss_pred HHHHHHHHHHH
Q 008251 525 LKEKMKEYNKK 535 (572)
Q Consensus 525 l~~~~~~~~~~ 535 (572)
+...+.+..++
T Consensus 249 ~~~~~g~~~~A 259 (327)
T 3cv0_A 249 SYSNMSQYDLA 259 (327)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHhccHHHH
Confidence 76665544443
No 194
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.84 E-value=1.2e-08 Score=80.84 Aligned_cols=84 Identities=26% Similarity=0.315 Sum_probs=75.4
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..++|.+|+..|.++++..+... .+++++|.++.+++++++|+.++++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---------------EAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 456778899999999999999999999999866432 34789999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcC
Q 008251 478 DSRNVKALYRRAQAYIQMA 496 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~ 496 (572)
+|++..+++++|.++..+|
T Consensus 73 ~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CTTCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 9999999999999998764
No 195
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.83 E-value=1.2e-08 Score=83.82 Aligned_cols=86 Identities=14% Similarity=0.117 Sum_probs=77.8
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD--NRDVKLEYKTLKE 527 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~--~~~~~~~l~~l~~ 527 (572)
+++++|.+++..++|++|+..++++++.+|.+..+++++|.+|..++++++|+..|+++++++|+ +..+...+..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~ 87 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR 87 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999 9888888877766
Q ss_pred HH-HHHHHH
Q 008251 528 KM-KEYNKK 535 (572)
Q Consensus 528 ~~-~~~~~~ 535 (572)
.+ .+.+++
T Consensus 88 ~~~~~~~~A 96 (112)
T 2kck_A 88 YIEGKEVEA 96 (112)
T ss_dssp TCSSCSHHH
T ss_pred HHhCCHHHH
Confidence 55 544443
No 196
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.83 E-value=1.3e-08 Score=90.99 Aligned_cols=89 Identities=20% Similarity=0.229 Sum_probs=78.5
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhc------------------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDL------------------DSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~------------------~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al 509 (572)
+..+.++|.++++.++|+.|+..|++++.+ +|.+..+|+++|.||..+|+|++|+.+|++++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 445779999999999999999999999999 77888999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008251 510 EIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 510 ~l~P~~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
+++|++..+...++.+...+.+..++.
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~ 117 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAE 117 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHH
Confidence 999999888888777766665554443
No 197
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.83 E-value=1.9e-08 Score=100.31 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=89.0
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..+.. |+|++|+..|++|+.+.+.... ......+++|+|.+|.++++|++|+.+|++++++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45667778888877 8888888888888887765322 1234567899999999999999999999999998
Q ss_pred CCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 478 DSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 478 ~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
.|.+ ..+++.+|.+++.+|++++|+..|++++ ++|+..
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 6643 4588999999999999999999999999 999754
No 198
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.83 E-value=1.4e-08 Score=101.27 Aligned_cols=109 Identities=13% Similarity=0.056 Sum_probs=91.5
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|+.+...|+|++|+..|++|+.+....... .....++.|+|.+|.. ++|++|+.++++|++
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP---------DTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH---------HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 346677888888889999999999999999886543221 2245678899999999 999999999999999
Q ss_pred cCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 477 LDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 477 ~~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
+.+.. ..+++++|.+|..+|+|++|+..|++++++.|++
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 87643 6899999999999999999999999999987654
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.82 E-value=5.2e-08 Score=103.23 Aligned_cols=143 Identities=16% Similarity=0.133 Sum_probs=110.6
Q ss_pred HHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHH
Q 008251 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (572)
Q Consensus 393 ~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~ 472 (572)
.+.+..+....+++..+..+|+|++|+..|+++|.......... +.....++.|+|.+|..+|+|++|+.++.
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 44566777788888889999999999999999999866533221 13356678999999999999999999999
Q ss_pred HHHhc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHH---HHHHHHHHHHHHHHH
Q 008251 473 KVLDL-----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEI-----DPDNRDVKLE---YKTLKEKMKEYNKKE 536 (572)
Q Consensus 473 ~al~~-----~p~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l-----~P~~~~~~~~---l~~l~~~~~~~~~~~ 536 (572)
++|+. -|++ ...++++|.+|..+|+|++|+..|++|+.+ -|+++.+... +..+...+++++.++
T Consensus 376 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae 455 (490)
T 3n71_A 376 RMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNE 455 (490)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99975 3455 578999999999999999999999999975 5888766554 444455555555555
Q ss_pred HHHHHhh
Q 008251 537 AKFYGNM 543 (572)
Q Consensus 537 ~~~~~~~ 543 (572)
. +|.++
T Consensus 456 ~-~~~~~ 461 (490)
T 3n71_A 456 F-MYHKM 461 (490)
T ss_dssp H-HHHHH
T ss_pred H-HHHHH
Confidence 3 34434
No 200
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.82 E-value=1.3e-08 Score=88.87 Aligned_cols=100 Identities=14% Similarity=0.197 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcC---CHHHHHHHHHHHHhcC-C-CCHHHHHHHH
Q 008251 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK---DYKQAEKLCTKVLDLD-S-RNVKALYRRA 489 (572)
Q Consensus 415 ~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~---~~~~Ai~~~~~al~~~-p-~~~ka~~~~g 489 (572)
...+.+.|.+.+...+. ...+.+|+|.|+.+.+ +.++++..++.+++.+ | ++..++|++|
T Consensus 14 l~~~~~~y~~e~~~~~~---------------~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LA 78 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSV---------------SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLA 78 (152)
T ss_dssp HHHHHHHHHHHHHTTCC---------------CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCC---------------cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHH
Confidence 45566677776653221 1345789999999988 7789999999999998 7 6799999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 490 QAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 490 ~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
.+|+++++|++|+++++++|+++|+|..+..+...+..++
T Consensus 79 v~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 79 VGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888877776554
No 201
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.82 E-value=1.3e-08 Score=108.87 Aligned_cols=142 Identities=14% Similarity=0.052 Sum_probs=106.7
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhcc------------CCCChHHHHHHHH------HHHHhHhhHHH
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD------------TSFGDEEKKQAKA------LKVACNLNNAA 456 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~------------~~~~~e~~~~~~~------~~~~~~~nla~ 456 (572)
....+..+...|..++..|++..|+..|.++++..+.. .....+-...... ....+++++|.
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 318 (537)
T 3fp2_A 239 RENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQ 318 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 34456677788888888888888888888888765530 0001111111111 12456889999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008251 457 CKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 457 ~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
++..+++|++|+..++++++.+|++..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+.....+..++.
T Consensus 319 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 398 (537)
T 3fp2_A 319 MYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAI 398 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888877766655444433
No 202
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.81 E-value=4.6e-08 Score=96.63 Aligned_cols=126 Identities=14% Similarity=0.062 Sum_probs=93.1
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH---hc
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL---DL 477 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al---~~ 477 (572)
.+...|..+...|+|++|+..|.+|+.......... ....+++++|.+|..+++|++|+.++++|+ +.
T Consensus 117 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~ 187 (293)
T 2qfc_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY---------QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA 187 (293)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTT---------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchH---------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 345567777777888888888888887654432221 134578999999999999999999999999 44
Q ss_pred CCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHH
Q 008251 478 DSRN----VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 478 ~p~~----~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~l~~~~~~~~~~ 535 (572)
.|++ ..+++++|.+|..+|+|++|+..|++|+++.++. ..+...++.+...+.+.+++
T Consensus 188 ~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 188 LHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred cCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 5554 2799999999999999999999999999886431 34555556555554444333
No 203
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.81 E-value=4.3e-08 Score=100.54 Aligned_cols=109 Identities=14% Similarity=-0.009 Sum_probs=96.9
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|+.|+..|.+|+++.+.... ......+++|+|.||..++++++|+.+++++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45777889999999999999999999999998764332 134566799999999999999999999999999
Q ss_pred -----cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008251 477 -----LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (572)
Q Consensus 477 -----~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~ 514 (572)
.+|....+++++|.+|..+|++++|+.+|++++++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999998654
No 204
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.80 E-value=3.3e-08 Score=101.47 Aligned_cols=109 Identities=16% Similarity=0.140 Sum_probs=96.3
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+..+...|..+...|+|++|+..|.+|+++.+.... ......+++|+|.||..+++|++|+.++++++
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 445677889999999999999999999999998876532 23456679999999999999999999999999
Q ss_pred h-----cC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008251 476 D-----LD-SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (572)
Q Consensus 476 ~-----~~-p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P 513 (572)
+ .+ |....+++++|.+|..+|++++|+.+|++++++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 252 AVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 9 56 88899999999999999999999999999999853
No 205
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.80 E-value=5.2e-08 Score=99.88 Aligned_cols=141 Identities=15% Similarity=0.061 Sum_probs=106.5
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+..+...|..++..|++..|+..|.+|+++.+..... ......+++++|.+|..+++|++|+.++.+|+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3456667777788888888888888888888776654332 12356778999999999999999999999999
Q ss_pred hcCC------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008251 476 DLDS------RNVKALYRRAQAYIQMADLDLAEFDIKKALE-----IDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (572)
Q Consensus 476 ~~~p------~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~-----l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f 544 (572)
++.+ ....+++++|.+|..+|++++|+..|++|+. .+|....+...++.+...+.+.+++. ..+.+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~al 288 (378)
T 3q15_A 210 ELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAF-QFIEEGL 288 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHH-HHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHH-HHHHHHH
Confidence 8643 1357899999999999999999999999999 77777666777777766555554443 3344444
Q ss_pred h
Q 008251 545 A 545 (572)
Q Consensus 545 ~ 545 (572)
.
T Consensus 289 ~ 289 (378)
T 3q15_A 289 D 289 (378)
T ss_dssp H
T ss_pred H
Confidence 3
No 206
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.78 E-value=5.7e-08 Score=80.42 Aligned_cols=89 Identities=18% Similarity=0.173 Sum_probs=79.4
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
...++++|.+++..++|+.|+..+++++..+|+++.+++++|.+|..++++++|+..|+++++++|++..+...+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999888888887766
Q ss_pred HHHHHHHHH
Q 008251 528 KMKEYNKKE 536 (572)
Q Consensus 528 ~~~~~~~~~ 536 (572)
...+..++.
T Consensus 84 ~~~~~~~A~ 92 (118)
T 1elw_A 84 FLNRFEEAK 92 (118)
T ss_dssp HTTCHHHHH
T ss_pred HHhhHHHHH
Confidence 655544443
No 207
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.77 E-value=3.5e-08 Score=97.50 Aligned_cols=107 Identities=16% Similarity=0.138 Sum_probs=90.4
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|+.|+..|++|+++....... ......+++|+|.+|.++++|++|+.++++++++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 36678899999999999999999999999876554322 1223367899999999999999999999999987
Q ss_pred CCC------CHHHHHHHHHHHHhcCCHHHH-HHHHHHHHHhC
Q 008251 478 DSR------NVKALYRRAQAYIQMADLDLA-EFDIKKALEID 512 (572)
Q Consensus 478 ~p~------~~ka~~~~g~a~~~l~~~~~A-~~~~~~al~l~ 512 (572)
.++ ...+|+++|.+|..+|++++| ..+|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 543 278999999999999999999 78899998764
No 208
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.77 E-value=4.6e-08 Score=83.14 Aligned_cols=89 Identities=22% Similarity=0.284 Sum_probs=80.0
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
...++++|.+++..++|++|+..++++++.+|++..+++.+|.+|..++++++|+..|+++++++|++..+...+..+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 45588999999999999999999999999999999999999999999999999999999999999999888888887766
Q ss_pred HHHHHHHHH
Q 008251 528 KMKEYNKKE 536 (572)
Q Consensus 528 ~~~~~~~~~ 536 (572)
.+.+..++.
T Consensus 96 ~~~~~~~A~ 104 (133)
T 2lni_A 96 AMKDYTKAM 104 (133)
T ss_dssp HTTCHHHHH
T ss_pred HHhhHHHHH
Confidence 665554443
No 209
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.77 E-value=3.9e-08 Score=95.11 Aligned_cols=109 Identities=18% Similarity=0.058 Sum_probs=93.3
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+..+...|..++..|+|++|+..|.+++.+........ ......+++++|.++..+++|++|+.++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567788999999999999999999999998864321110 02345678999999999999999999999999
Q ss_pred hc--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008251 476 DL--------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (572)
Q Consensus 476 ~~--------~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l 511 (572)
++ +|....+++.+|.+|..+|++++|+..|++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 98 7778899999999999999999999999999987
No 210
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.77 E-value=7.6e-08 Score=104.51 Aligned_cols=116 Identities=20% Similarity=0.141 Sum_probs=92.2
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCC
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN 481 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~ 481 (572)
+...|..+++.|++++|+..|+++++..+....... ....++.+++.+|.+.|++++|+..++++++.+|++
T Consensus 478 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~--------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~ 549 (597)
T 2xpi_A 478 LNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK--------PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTND 549 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG--------GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh--------hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 445566666666666666666666655433111100 014568899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
+.+|+.+|.+|...|++++|+..|+++++++|++..+...+..+
T Consensus 550 ~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~ 593 (597)
T 2xpi_A 550 ANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRA 593 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 99999999999999999999999999999999998888777654
No 211
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.76 E-value=4.4e-08 Score=83.19 Aligned_cols=95 Identities=20% Similarity=0.220 Sum_probs=80.7
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNV---KALYRRAQAYIQMADLDLAEFDIKKALEIDPDN---RDVKLEYK 523 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~---ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~---~~~~~~l~ 523 (572)
.++++|.+++..++|++|+..++++++.+|++. .+++++|.+|..+|++++|+..|+++++.+|++ ..+...+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 367999999999999999999999999999998 899999999999999999999999999999999 77777787
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 008251 524 TLKEKMKEYNKKEAKFYGNMFA 545 (572)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~~f~ 545 (572)
.+...+.+..++. ..|.+...
T Consensus 84 ~~~~~~g~~~~A~-~~~~~~~~ 104 (129)
T 2xev_A 84 LSQYGEGKNTEAQ-QTLQQVAT 104 (129)
T ss_dssp HHHHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHHcCCHHHHH-HHHHHHHH
Confidence 7766655554443 33444443
No 212
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.76 E-value=6e-08 Score=85.01 Aligned_cols=109 Identities=21% Similarity=0.223 Sum_probs=92.5
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|++|+..|.+++.+.+..... .....+++++|.++..+++|++|+.++++++++
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR---------AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc---------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34577889999999999999999999999987754321 334567889999999999999999999999987
Q ss_pred CCC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 478 DSR------NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 478 ~p~------~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
.+. ...+++.+|.+|..+|++++|+..+++++++....
T Consensus 119 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 119 AQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 162 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 432 26789999999999999999999999999876543
No 213
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.75 E-value=4.7e-08 Score=100.86 Aligned_cols=125 Identities=14% Similarity=0.083 Sum_probs=103.9
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+..+...|..++..|+|.+|+..|+++++..+.+. .....+++++|.+|..+++|++|+.++++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL-----------RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh-----------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45677888999999999999999999999999855422 2344578899999999999999999999999
Q ss_pred hc------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHH
Q 008251 476 DL------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI------DPDNRDVKLEYKTLKEKMKE 531 (572)
Q Consensus 476 ~~------~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l------~P~~~~~~~~l~~l~~~~~~ 531 (572)
++ ++....+++++|.+|..+|++++|+..|++++.+ .|....+...+..+...+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 88 5777899999999999999999999999999998 44444455556665555554
No 214
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.75 E-value=6.3e-08 Score=95.25 Aligned_cols=132 Identities=22% Similarity=0.203 Sum_probs=105.0
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|++|+..|.+++.+........ ......+++++|.++..+++|++|+.+++++++
T Consensus 67 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 139 (311)
T 3nf1_A 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 139 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC-------ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 3456688899999999999999999999998864321000 123456788999999999999999999999998
Q ss_pred cC--------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 477 LD--------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEI--------DPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 477 ~~--------p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l--------~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
+. |....+++++|.+|..+|++++|+..|++++.+ .|....+...+..+.....+.+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 214 (311)
T 3nf1_A 140 IREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 214 (311)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 74 566889999999999999999999999999998 555555666666665555544443
No 215
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.72 E-value=6.3e-08 Score=89.14 Aligned_cols=106 Identities=12% Similarity=0.110 Sum_probs=91.2
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|+.|+..|.+++.+...... ......+++++|.++..+++|++|+.++.+++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4667888999999999999999999999998765432 1335667899999999999999999999999998
Q ss_pred ---CC----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008251 478 ---DS----RNVKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (572)
Q Consensus 478 ---~p----~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~ 512 (572)
.+ ....+++++|.+|..+|++++|+..|++++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 33 236789999999999999999999999999774
No 216
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.72 E-value=8e-08 Score=104.33 Aligned_cols=131 Identities=11% Similarity=-0.029 Sum_probs=106.2
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..+++.|++++|+..|.++++..+.+ ..++++++.+|.+.|++++|+..++++++.+
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQF---------------GPAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3455667888888888888988888888765532 2347899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008251 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (572)
Q Consensus 479 p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~ 545 (572)
|++..+++.+|.+|.+.|++++|++.|+++++++|.+..+...+..+.......+++. ..|.++..
T Consensus 438 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~~~~ 503 (597)
T 2xpi_A 438 QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAI-NHFQNALL 503 (597)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHH-HHHHHHHH
Confidence 9999999999999999999999999999999999999888777777766555444433 34455544
No 217
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.69 E-value=1.3e-07 Score=92.98 Aligned_cols=109 Identities=19% Similarity=0.125 Sum_probs=92.0
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|.+|+..|.+++++........ ......+++++|.++..+++|++|+.+++++++
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD-------HPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3466788899999999999999999999998764320000 023456688999999999999999999999999
Q ss_pred c--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008251 477 L--------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (572)
Q Consensus 477 ~--------~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~ 512 (572)
+ +|....+++.+|.+|..+|++++|+..|++++++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 8 67778999999999999999999999999999853
No 218
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.69 E-value=1.2e-07 Score=97.16 Aligned_cols=109 Identities=18% Similarity=0.134 Sum_probs=92.4
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|+.|+..|.+++.+.+..... .....+++++|.+|..++++++|+.++++++++
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK---------AAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 256 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 45567889999999999999999999999988764431 234557889999999999999999999999988
Q ss_pred CCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 478 DSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 478 ~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
.+.. ..+++++|.+|..+|++++|+..|++++.+.+..
T Consensus 257 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 257 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 7655 7889999999999999999999999999886543
No 219
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=1.6e-07 Score=81.34 Aligned_cols=88 Identities=23% Similarity=0.204 Sum_probs=78.7
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
..++++|.+++..++|+.|+..++++++.+|++ ..+++++|.+|..++++++|+.+|+++++++|++..+...+..+
T Consensus 29 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 108 (148)
T 2dba_A 29 EQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQA 108 (148)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHH
Confidence 447799999999999999999999999999998 99999999999999999999999999999999998888888877
Q ss_pred HHHHHHHHHHH
Q 008251 526 KEKMKEYNKKE 536 (572)
Q Consensus 526 ~~~~~~~~~~~ 536 (572)
...+.+..++.
T Consensus 109 ~~~~~~~~~A~ 119 (148)
T 2dba_A 109 LEKLGRLDQAV 119 (148)
T ss_dssp HHHHTCHHHHH
T ss_pred HHHcCCHHHHH
Confidence 66665555443
No 220
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.68 E-value=2.3e-07 Score=78.09 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=80.1
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
...+++++|.+++..++|+.|+..+++++..+|++..+++.+|.++..++++++|+..|++++.++|++..+...+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLAL 90 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHH
Confidence 45568899999999999999999999999999999999999999999999999999999999999999988888877776
Q ss_pred HHHHHHHHHH
Q 008251 527 EKMKEYNKKE 536 (572)
Q Consensus 527 ~~~~~~~~~~ 536 (572)
....+..++.
T Consensus 91 ~~~~~~~~A~ 100 (131)
T 2vyi_A 91 SSLNKHVEAV 100 (131)
T ss_dssp HHTTCHHHHH
T ss_pred HHhCCHHHHH
Confidence 6655544443
No 221
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.67 E-value=1e-07 Score=94.34 Aligned_cols=106 Identities=20% Similarity=0.147 Sum_probs=92.1
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc-
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL- 477 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~- 477 (572)
+..+...|..++..|+|+.|+..|+++++..+.+. .....++.++|.++...++|+.|+.++++++++
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccH-----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 55678899999999999999999999999854421 234567889999999999999999999999887
Q ss_pred -----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 478 -----DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 478 -----~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
.+....+++.+|.+|..+|++++|+..|++++++.|..
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 45568899999999999999999999999999986654
No 222
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.67 E-value=1.8e-07 Score=82.79 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=79.0
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
....++++|.+++..++|+.|+..+.++++.+|.+..+++++|.++..++++++|+.+|+++++++|++..+...+..+.
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 34558899999999999999999999999999999999999999999999999999999999999999988887777776
Q ss_pred HHHHHHHHH
Q 008251 527 EKMKEYNKK 535 (572)
Q Consensus 527 ~~~~~~~~~ 535 (572)
..+.+..++
T Consensus 92 ~~~~~~~~A 100 (166)
T 1a17_A 92 MALGKFRAA 100 (166)
T ss_dssp HHTTCHHHH
T ss_pred HHhccHHHH
Confidence 555444433
No 223
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.65 E-value=2.7e-07 Score=85.21 Aligned_cols=89 Identities=15% Similarity=0.027 Sum_probs=78.7
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNV----------------KALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~----------------ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
....+.++|.++++.++|++|+..+++++++.|.++ .+++++|.+|..+++|++|+.+|+++++
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 344577999999999999999999999999999887 9999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 511 IDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 511 l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
++|++..+...+..+...+.+.+++
T Consensus 117 ~~p~~~~~~~~lg~~~~~~~~~~~A 141 (198)
T 2fbn_A 117 IDKNNVKALYKLGVANMYFGFLEEA 141 (198)
T ss_dssp HSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred hCcccHHHHHHHHHHHHHcccHHHH
Confidence 9999988888887776665555443
No 224
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.65 E-value=1.8e-07 Score=92.61 Aligned_cols=137 Identities=16% Similarity=0.121 Sum_probs=105.6
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+++.|+..|.+++++.+.... ......+++++|.++..++++++|+.++++++++
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 252 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3556788899999999999999999999998775432 1334557899999999999999999999999988
Q ss_pred CCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008251 478 DSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (572)
Q Consensus 478 ~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~l~~~~~~~~~~~~~~~~~~f 544 (572)
.+.. ..+++.+|.+|..+|++++|+..|++++.+.+.. ..+...+..+...+.+..++. ..|.+..
T Consensus 253 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a~ 330 (338)
T 3ro2_A 253 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM-HFAEKHL 330 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHHH
T ss_pred HHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHH-HHHHHHH
Confidence 7655 7899999999999999999999999999886543 224444555544444443333 3344443
No 225
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.64 E-value=1e-07 Score=97.68 Aligned_cols=122 Identities=17% Similarity=0.117 Sum_probs=99.4
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc-
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL- 477 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~- 477 (572)
+..+...|..++..|+|.+|+..|++++...+.+. .....+++++|.++..+++|+.|+.++++++.+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccH-----------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999855422 234567889999999999999999999999887
Q ss_pred -----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHH
Q 008251 478 -----DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKE 531 (572)
Q Consensus 478 -----~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~l~~~~~~ 531 (572)
.|....+++.+|.+|..+|++++|+..|++++++.|.. ..+...+..+......
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 34558899999999999999999999999999987653 2244455555444444
No 226
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.63 E-value=3.2e-07 Score=89.09 Aligned_cols=73 Identities=15% Similarity=0.050 Sum_probs=42.4
Q ss_pred hHhhHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008251 450 CNLNNAACKLK----LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVKLE 521 (572)
Q Consensus 450 ~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~ 521 (572)
+++++|.+|.. .+++++|+.+++++++. +++.+++++|.+|.. .+++++|+.+|+++++++ +..+...
T Consensus 76 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~ 151 (273)
T 1ouv_A 76 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTI 151 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHH
Confidence 35566666666 66666666666666655 356666666666666 666666666666666654 3334444
Q ss_pred HHHHH
Q 008251 522 YKTLK 526 (572)
Q Consensus 522 l~~l~ 526 (572)
+..+.
T Consensus 152 lg~~~ 156 (273)
T 1ouv_A 152 LGSLY 156 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 227
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.62 E-value=1.4e-07 Score=92.65 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=79.0
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~ 528 (572)
..++++|.++++.++|++|+..++++++.+|+++.+++++|.+|..+|++++|+.+|+++++++|++..+...++.+...
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE 84 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34779999999999999999999999999999999999999999999999999999999999999998888888777666
Q ss_pred HHHHHHHH
Q 008251 529 MKEYNKKE 536 (572)
Q Consensus 529 ~~~~~~~~ 536 (572)
+.+..++.
T Consensus 85 ~g~~~~A~ 92 (281)
T 2c2l_A 85 MESYDEAI 92 (281)
T ss_dssp TTCHHHHH
T ss_pred cCCHHHHH
Confidence 55554443
No 228
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.62 E-value=3.6e-07 Score=76.17 Aligned_cols=96 Identities=28% Similarity=0.385 Sum_probs=81.1
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
..+++++|.++...++|+.|+..+.+++..+|++..+++.+|.++...+++++|+..|++++.++|.+..+...+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 35578999999999999999999999999999999999999999999999999999999999999999887777777665
Q ss_pred HHHHHHHHHHHHHHhhh
Q 008251 528 KMKEYNKKEAKFYGNMF 544 (572)
Q Consensus 528 ~~~~~~~~~~~~~~~~f 544 (572)
...+..++. ..|.+..
T Consensus 89 ~~~~~~~A~-~~~~~~~ 104 (125)
T 1na0_A 89 KQGDYDEAI-EYYQKAL 104 (125)
T ss_dssp HTTCHHHHH-HHHHHHH
T ss_pred HhcCHHHHH-HHHHHHH
Confidence 554444333 3344443
No 229
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.62 E-value=4.6e-07 Score=94.41 Aligned_cols=124 Identities=12% Similarity=0.065 Sum_probs=98.0
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
....+....+.+......|+|++|+..|++++.+........ +......+.|+|.+|..+|+|++|+.+|+++
T Consensus 294 ~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 366 (433)
T 3qww_A 294 MVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKI 366 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 334455556666666677899999999999999865433221 1335567889999999999999999999999
Q ss_pred Hhc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Q 008251 475 LDL-----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEI-----DPDNRDVKLEYKTL 525 (572)
Q Consensus 475 l~~-----~p~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l-----~P~~~~~~~~l~~l 525 (572)
|+. -|++ ...|+++|.+|..+|+|++|+..|++|+++ -|+++.+......+
T Consensus 367 L~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 367 IKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 975 3444 578999999999999999999999999975 58888777665544
No 230
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.62 E-value=1.7e-08 Score=103.40 Aligned_cols=85 Identities=12% Similarity=0.264 Sum_probs=73.7
Q ss_pred CCCCCCCeEEEEEEEEeCCCeEeeec--cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCC
Q 008251 167 ENPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGA 244 (572)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~ 244 (572)
..+..||.|++||.+.. +|+.|+++ .++.|.+|.|+++|||+++|.||++|+++.|.||....||..+
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~--------- 228 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN--------- 228 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTCEEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT---------
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCCCccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCC---------
Confidence 35789999999999995 89999876 7899999999999999999999999999999997434677543
Q ss_pred CCCCCeEEEEEEEecccc
Q 008251 245 VPPNATLQIALELVSWKT 262 (572)
Q Consensus 245 ip~~~~l~~~v~l~~~~~ 262 (572)
.+|.+++|+|+|.++..
T Consensus 229 -laGk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 229 -LKGKAAKFAIKVNKVEA 245 (392)
T ss_dssp -TSSCEEEECCCEEEEEE
T ss_pred -CCCCeEEEEEEEEEEEc
Confidence 37899999999999764
No 231
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.61 E-value=2.6e-07 Score=89.88 Aligned_cols=109 Identities=15% Similarity=0.058 Sum_probs=90.0
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC--
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-- 478 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-- 478 (572)
.....|..+++.++|..|+..|+.++..-.. .+...+++++|.++..+|++++|+.+|++++...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~-------------~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK-------------FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH-------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc-------------ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 5677888999999999999999866543210 1234568899999999999999999999998654
Q ss_pred CC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008251 479 SR-NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYK 523 (572)
Q Consensus 479 p~-~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~ 523 (572)
|. .+.+++++|.|+.++|+.++|+..|++++..+|+ ..+...|.
T Consensus 204 P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 204 EACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp TTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 55 6789999999999999999999999999999999 77766654
No 232
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.61 E-value=2e-07 Score=92.77 Aligned_cols=86 Identities=10% Similarity=0.082 Sum_probs=52.0
Q ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh---CCC-CHHHHHHHHHHHHHHHHHHHHH
Q 008251 461 LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI---DPD-NRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 461 ~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l---~P~-~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
+++++.|+..|+++++.+|+++.+|..++..+..+|++++|+..|++++.. .|+ +..+...+..+...........
T Consensus 182 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~ 261 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASIL 261 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 567777777777777777777777777777777777777777777777764 443 4455555555544443333322
Q ss_pred HHHHHhhhhcc
Q 008251 537 AKFYGNMFAKM 547 (572)
Q Consensus 537 ~~~~~~~f~~~ 547 (572)
..+.++....
T Consensus 262 -~~~~~a~~~~ 271 (308)
T 2ond_A 262 -KVEKRRFTAF 271 (308)
T ss_dssp -HHHHHHHHHT
T ss_pred -HHHHHHHHHc
Confidence 4444444433
No 233
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.61 E-value=1.3e-07 Score=97.59 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=92.2
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|++|+..|.+++++.+..... .....+++++|.+|..++++++|+.++++++++.
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDR---------AAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH---------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 4467788999999999999999999999988764321 2345578899999999999999999999999987
Q ss_pred CCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008251 479 SRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (572)
Q Consensus 479 p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~ 514 (572)
+.. ..+++.+|.+|..+|++++|+..|++++.+.+.
T Consensus 294 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 294 VELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 754 789999999999999999999999999988654
No 234
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.61 E-value=1.7e-07 Score=79.03 Aligned_cols=88 Identities=20% Similarity=0.206 Sum_probs=76.4
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN-------RDVKL 520 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~-------~~~~~ 520 (572)
...++++|.+++..++|+.|+..+.++++.+|.++.+++++|.+|..++++++|+.+|++++.+.|++ ..+..
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999998877 66666
Q ss_pred HHHHHHHHHHHHHHH
Q 008251 521 EYKTLKEKMKEYNKK 535 (572)
Q Consensus 521 ~l~~l~~~~~~~~~~ 535 (572)
.+..+........++
T Consensus 84 ~la~~~~~~~~~~~A 98 (131)
T 1elr_A 84 RIGNSYFKEEKYKDA 98 (131)
T ss_dssp HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhccHHHH
Confidence 676665555444443
No 235
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.60 E-value=2.7e-07 Score=75.99 Aligned_cols=79 Identities=25% Similarity=0.216 Sum_probs=69.5
Q ss_pred HhhHHHHHHhcCCHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008251 451 NLNNAACKLKLKDYKQAEKLCTKVLDLD-------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYK 523 (572)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~-------p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~ 523 (572)
++.+|..+++.++|..|+.++++|++.. +..+..++++|.||.++|+++.|+..++++++++|++..+...+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 6799999999999999999999999863 346789999999999999999999999999999999988877766
Q ss_pred HHHHHH
Q 008251 524 TLKEKM 529 (572)
Q Consensus 524 ~l~~~~ 529 (572)
.+...+
T Consensus 88 ~~~~~~ 93 (104)
T 2v5f_A 88 YFEYIM 93 (104)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 236
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.57 E-value=3.5e-07 Score=90.97 Aligned_cols=103 Identities=15% Similarity=0.171 Sum_probs=72.2
Q ss_pred hhHHHHHHHH-------HcCcH-------HHHHHHHHHHHH-HhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHH
Q 008251 401 KKKEQGNTLF-------KAGKY-------ARASKRYEKAVK-YIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYK 465 (572)
Q Consensus 401 ~~k~~G~~~~-------~~g~~-------~~A~~~y~~al~-~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~ 465 (572)
.+...|..+. +.|++ ++|+..|++|++ +.|... .+++++|.++.++++++
T Consensus 52 ~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~---------------~~~~~~~~~~~~~~~~~ 116 (308)
T 2ond_A 52 IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNM---------------LLYFAYADYEESRMKYE 116 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCH---------------HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccH---------------HHHHHHHHHHHhcCCHH
Confidence 3445555544 45775 899999999999 555432 24667777777777777
Q ss_pred HHHHHHHHHHhcCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 008251 466 QAEKLCTKVLDLDSRNVK-ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDV 518 (572)
Q Consensus 466 ~Ai~~~~~al~~~p~~~k-a~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~ 518 (572)
+|+..|+++++++|.+.. +|+++|.++.+.|++++|+..|++|++++|.+..+
T Consensus 117 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 170 (308)
T 2ond_A 117 KVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHV 170 (308)
T ss_dssp HHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHH
T ss_pred HHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHH
Confidence 777777777777777765 77777777777777777777777777777766433
No 237
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.56 E-value=1.8e-08 Score=107.04 Aligned_cols=102 Identities=12% Similarity=0.125 Sum_probs=88.0
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..+++.|+|++|+..|++|+++.+... .+++|+|.+|.++++|++|+.+++++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---------------~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI---------------KGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56678899999999999999999999999866432 358899999999999999999999999999
Q ss_pred CCCHHHHHHHHHH--HHhcCCHHHHHHHHH-----------HHHHhCCCC
Q 008251 479 SRNVKALYRRAQA--YIQMADLDLAEFDIK-----------KALEIDPDN 515 (572)
Q Consensus 479 p~~~ka~~~~g~a--~~~l~~~~~A~~~~~-----------~al~l~P~~ 515 (572)
|++..+++.++.+ +.+++++++|++.++ +++.++|+.
T Consensus 105 p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 105 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999999 999999999999999 888888764
No 238
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.56 E-value=1.6e-07 Score=98.75 Aligned_cols=120 Identities=15% Similarity=0.072 Sum_probs=96.0
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc--CCHHHHHHHHHHHHh
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL--KDYKQAEKLCTKVLD 476 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~--~~~~~Ai~~~~~al~ 476 (572)
+..+.+.|..++..|+|++|+..|++++.+.+....... .....++.++|.++++. ++|++|+.+|++|++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~ 166 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYR-------IESPELDCEEGWTRLKCGGNQNERAKVCFEKALE 166 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSC-------CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccc-------hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 345668899999999999999999999998776432210 00133467788777765 479999999999999
Q ss_pred cCCCCHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQ---MADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~---l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
++|+++.+++.+|.++.. .+++++|++.|++|++++|++..+...+...
T Consensus 167 ~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~ 218 (472)
T 4g1t_A 167 KKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALK 218 (472)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHH
Confidence 999999999999998655 5777899999999999999998877766543
No 239
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.55 E-value=4.7e-07 Score=98.01 Aligned_cols=116 Identities=13% Similarity=0.010 Sum_probs=103.8
Q ss_pred HhhhHHHHHHHHHcCc----------HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcC--CHHH
Q 008251 399 AGKKKEQGNTLFKAGK----------YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQ 466 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~----------~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~--~~~~ 466 (572)
...+..+|..+...++ |.+|+..|.++++..|.... ++++++.+..+++ +|++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~---------------aW~hR~w~l~~l~~~~~~~ 127 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG---------------TWHHRCWLLSRLPEPNWAR 127 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHH---------------HHHHHHHHHHHcccccHHH
Confidence 4567778888887777 99999999999998887554 3889999999999 7799
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 467 AEKLCTKVLDLDSRNVKALYRRAQAYIQMA-DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 467 Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~-~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
|+..|+++++.||.|..||+.|+.++..++ .+++|++++.++++++|+|..+......+...+
T Consensus 128 el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 128 ELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 999999999999999999999999999999 999999999999999999999888888776554
No 240
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.54 E-value=1.2e-06 Score=91.35 Aligned_cols=124 Identities=8% Similarity=-0.021 Sum_probs=98.4
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+......-..+..+|+|++|+..|++++.......... +.....++.|+|.+|..+|+|++|+.+|.++|+.
T Consensus 286 ~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i 358 (429)
T 3qwp_A 286 EVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEP 358 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 345555666678889999999999999998654432221 1345667889999999999999999999999974
Q ss_pred -----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHH
Q 008251 478 -----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEI-----DPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 478 -----~p~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l-----~P~~~~~~~~l~~l~~~ 528 (572)
-|++ ...++++|.+|..+|++++|+..|++|+++ -|+++.+...+..+...
T Consensus 359 ~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~ 422 (429)
T 3qwp_A 359 YRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEEC 422 (429)
T ss_dssp HHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 2444 578999999999999999999999999975 68888777766555443
No 241
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.50 E-value=5.3e-07 Score=97.61 Aligned_cols=123 Identities=10% Similarity=-0.033 Sum_probs=103.2
Q ss_pred HHHHHHHhhhHHHHHHHHHcCcH-HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCC--------
Q 008251 393 EEKIEAAGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD-------- 463 (572)
Q Consensus 393 ~e~~~~a~~~k~~G~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~-------- 463 (572)
..+++.-.........+.+.++| ++|+..|.+++.+.|.... ++++++.+..++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~t---------------aW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFAT---------------LWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHH---------------HHHHHHHHHHhcccccchhhhh
Confidence 34444444445555556667766 5789999999999887654 48899999999988
Q ss_pred --HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008251 464 --YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA--DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (572)
Q Consensus 464 --~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~--~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~ 530 (572)
+++++..++++++.+|++..||+.|+.++.+++ ++++|++++.++++++|.|..+....+-+...+.
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAA 157 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999 7799999999999999999988888877766554
No 242
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.50 E-value=4.9e-07 Score=74.37 Aligned_cols=83 Identities=19% Similarity=0.136 Sum_probs=70.6
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..+|+.++|..|+.-|+.|++..+...... .....++.++|.|++++|+++.|+.+++++++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~--------~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIST--------IDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCS--------SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCc--------ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 45678999999999999999999999999875443110 1134668899999999999999999999999999
Q ss_pred CCCHHHHHHHH
Q 008251 479 SRNVKALYRRA 489 (572)
Q Consensus 479 p~~~ka~~~~g 489 (572)
|++..++.+++
T Consensus 77 P~~~~~~~n~~ 87 (104)
T 2v5f_A 77 PEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHhhHH
Confidence 99999988876
No 243
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.49 E-value=1.5e-06 Score=84.34 Aligned_cols=76 Identities=17% Similarity=0.114 Sum_probs=61.3
Q ss_pred HhHhhHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHH
Q 008251 449 ACNLNNAACKLK----LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVKL 520 (572)
Q Consensus 449 ~~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~ 520 (572)
.+++++|.+|.. .+++++|+.+++++++.+ +..+++++|.+|.. .+++++|+.+|+++++.+ +..+..
T Consensus 111 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 186 (273)
T 1ouv_A 111 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGCF 186 (273)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred cHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHH
Confidence 457788989888 889999999999988875 78888889999888 889999999999888874 455666
Q ss_pred HHHHHHHH
Q 008251 521 EYKTLKEK 528 (572)
Q Consensus 521 ~l~~l~~~ 528 (572)
.+..+...
T Consensus 187 ~lg~~~~~ 194 (273)
T 1ouv_A 187 NAGNMYHH 194 (273)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66666555
No 244
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.49 E-value=1.2e-07 Score=79.66 Aligned_cols=77 Identities=12% Similarity=0.143 Sum_probs=65.8
Q ss_pred hcCCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008251 460 KLKDYKQAEKLCTKVLDL---DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 460 k~~~~~~Ai~~~~~al~~---~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
.+|+|++|+..+++++++ +|+++.+++++|.+|..+|+|++|+..|+++++++|++..+...+..+...+.+.+++.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468899999999999999 69999999999999999999999999999999999999999988888877766655544
No 245
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.49 E-value=1.3e-06 Score=80.14 Aligned_cols=110 Identities=15% Similarity=0.048 Sum_probs=91.3
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+..+...|..++..|+|++|+..|.+++.+....... ......+++++|.++..++++++|+.++++++.
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED--------PLAASANAYEVATVALHFGDLAGARQEYEKSLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc--------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 456678899999999999999999999999987644322 123456788999999999999999999999997
Q ss_pred cCC--CC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008251 477 LDS--RN----VKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (572)
Q Consensus 477 ~~p--~~----~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~ 514 (572)
+.+ .+ ..++.++|.++..+|++++|+..|++++++...
T Consensus 136 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 136 YAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 632 22 456789999999999999999999999987543
No 246
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.49 E-value=3.6e-07 Score=93.54 Aligned_cols=87 Identities=25% Similarity=0.230 Sum_probs=77.7
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHh----------------cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLD----------------LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~----------------~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P 513 (572)
.+.++|.++++.++|++|+..|++|++ ++|.+..+|+++|.||+++++|++|+.+|++|++++|
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc
Confidence 377999999999999999999999998 7888899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q 008251 514 DNRDVKLEYKTLKEKMKEYNKKE 536 (572)
Q Consensus 514 ~~~~~~~~l~~l~~~~~~~~~~~ 536 (572)
++..+...+..+...+.+.+++.
T Consensus 305 ~~~~a~~~lg~~~~~~g~~~eA~ 327 (370)
T 1ihg_A 305 SNTKALYRRAQGWQGLKEYDQAL 327 (370)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hhHHHHHHHHHHHHHccCHHHHH
Confidence 99888888877766665555443
No 247
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.48 E-value=4.3e-07 Score=80.05 Aligned_cols=71 Identities=13% Similarity=0.183 Sum_probs=65.1
Q ss_pred hcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADL----------DLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~----------~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
+++.|++|+..++++++++|+++.+|+++|.++..++++ ++|+..|++|++++|++.++...+..+...+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 567899999999999999999999999999999999876 5999999999999999999999988887665
Q ss_pred H
Q 008251 530 K 530 (572)
Q Consensus 530 ~ 530 (572)
.
T Consensus 94 g 94 (158)
T 1zu2_A 94 A 94 (158)
T ss_dssp H
T ss_pred c
Confidence 4
No 248
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.47 E-value=7e-07 Score=83.65 Aligned_cols=128 Identities=15% Similarity=0.011 Sum_probs=89.3
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhcc---------CCC----ChHHH-----HHHHHHHHHhHhhHHHHHHh
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD---------TSF----GDEEK-----KQAKALKVACNLNNAACKLK 460 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~---------~~~----~~e~~-----~~~~~~~~~~~~nla~~~~k 460 (572)
+..+...|..++..+++.+|+..|++|++..... ... ..++. ..+..-...+++|+|.+|..
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~ 97 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVN 97 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Confidence 4556677777777778888888887777642110 000 01110 01111134467899999988
Q ss_pred ----cCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 461 ----LKDYKQAEKLCTKVLDLDS--RNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 461 ----~~~~~~Ai~~~~~al~~~p--~~~ka~~~~g~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
.+++.+|+.+++++++..+ .++.+++++|.+|.. .+++++|+.+|++|+++ |.+..+...+..+..
T Consensus 98 g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 98 RQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp GGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 8899999999999998877 458999999999998 88999999999999988 556566666666543
No 249
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.46 E-value=1.1e-06 Score=70.66 Aligned_cols=69 Identities=19% Similarity=0.042 Sum_probs=62.3
Q ss_pred HhHhhHHHHHHhcCC---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 008251 449 ACNLNNAACKLKLKD---YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD 517 (572)
Q Consensus 449 ~~~~nla~~~~k~~~---~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~ 517 (572)
.++..+|.+++..++ ..+|...++++|++||+++++++.+|..++..|+|++|+..++++++.+|.+..
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 346788888876665 799999999999999999999999999999999999999999999999999543
No 250
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.45 E-value=4.2e-07 Score=82.20 Aligned_cols=114 Identities=11% Similarity=0.043 Sum_probs=89.8
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCC--------------hHHHHHHHH------HHHHhHhhHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG--------------DEEKKQAKA------LKVACNLNNA 455 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--------------~e~~~~~~~------~~~~~~~nla 455 (572)
...+..+...|..++..|++++|+..|++++...| +.... .+....++. -...+++++|
T Consensus 37 P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la 115 (176)
T 2r5s_A 37 QSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELA 115 (176)
T ss_dssp HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHH
Confidence 34456788899999999999999999999877654 21100 000111111 1246789999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 456 ACKLKLKDYKQAEKLCTKVLDLDSRN--VKALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 456 ~~~~k~~~~~~Ai~~~~~al~~~p~~--~ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
.++..+|++++|+..++++++.+|++ ..+++++|.++..+|++++|+..|++++.
T Consensus 116 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 116 VQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999999976 67999999999999999999999999875
No 251
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.45 E-value=1.7e-06 Score=85.66 Aligned_cols=112 Identities=12% Similarity=-0.131 Sum_probs=79.8
Q ss_pred HhhhHHHHHHHHHcC--cHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHH----Hhc---CCHHHHHH
Q 008251 399 AGKKKEQGNTLFKAG--KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACK----LKL---KDYKQAEK 469 (572)
Q Consensus 399 a~~~k~~G~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~----~k~---~~~~~Ai~ 469 (572)
...+..+|..+...+ ++.+|+..+..++...|.+... ++.++.+. .++ +++++++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~a---------------W~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQI---------------WNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHH---------------HHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHH---------------HHHHHHHHHHHHHhccccCCHHHHHH
Confidence 456778888888888 9999999999999988876543 44555555 444 56777777
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 470 LCTKVLDLDSRNVKALYRRAQAYIQMADLD--LAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 470 ~~~~al~~~p~~~ka~~~~g~a~~~l~~~~--~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
.|+++++.+|.|..+|+.|+.++..++.++ ++++.+.++++.+|.|-.+......+
T Consensus 132 ~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~l 189 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFL 189 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 777777777777777777777777777666 77777777777777776665555444
No 252
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.44 E-value=5.6e-07 Score=84.32 Aligned_cols=109 Identities=16% Similarity=0.121 Sum_probs=80.7
Q ss_pred HHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcC----CHHHHHHHHHHHHhcCCCCH
Q 008251 407 NTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK----DYKQAEKLCTKVLDLDSRNV 482 (572)
Q Consensus 407 ~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~----~~~~Ai~~~~~al~~~p~~~ 482 (572)
..++..|..-.....|.+|+.++..... .-...+++++|.+|.. + ++++|+.+++++++ +.++
T Consensus 19 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~----------~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~ 85 (212)
T 3rjv_A 19 RAQYYLADTWVSSGDYQKAEYWAQKAAA----------QGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSK 85 (212)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCH
Confidence 4445555544445566666666543211 1134568899999988 7 89999999999965 6799
Q ss_pred HHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH
Q 008251 483 KALYRRAQAYIQ----MADLDLAEFDIKKALEIDPD--NRDVKLEYKTLKEK 528 (572)
Q Consensus 483 ka~~~~g~a~~~----l~~~~~A~~~~~~al~l~P~--~~~~~~~l~~l~~~ 528 (572)
.+++++|.+|.. .+++++|+.+|++|.+..|. +..+...|..+...
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 999999999998 89999999999999999884 45666677666443
No 253
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.38 E-value=3.1e-06 Score=84.89 Aligned_cols=121 Identities=15% Similarity=0.045 Sum_probs=102.1
Q ss_pred HcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcC-CHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 008251 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-DYKQAEKLCTKVLDLDSRNVKALYRRA 489 (572)
Q Consensus 411 ~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~-~~~~Ai~~~~~al~~~p~~~ka~~~~g 489 (572)
+.....+|+..+.++|.++|.+.. ++++++.+...++ .+++++..++++|..+|.+..+|+.|+
T Consensus 66 ~~e~se~AL~lt~~~L~~nP~~yt---------------aWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~ 130 (349)
T 3q7a_A 66 KEEKSERALELTEIIVRMNPAHYT---------------VWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRL 130 (349)
T ss_dssp TTCCSHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHhCchhHH---------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 344557899999999999887653 4889999999999 599999999999999999999999999
Q ss_pred HHHHhc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH-------HHHHHHHHhhhhc
Q 008251 490 QAYIQM-A-DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN-------KKEAKFYGNMFAK 546 (572)
Q Consensus 490 ~a~~~l-~-~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~-------~~~~~~~~~~f~~ 546 (572)
.++..+ + +++++++.+.++++++|.|..+....+-+...+.... ..+-..+.++...
T Consensus 131 wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~ 196 (349)
T 3q7a_A 131 LLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 (349)
T ss_dssp HHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh
Confidence 999998 8 9999999999999999999998888887766665554 3555555555543
No 254
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.37 E-value=1e-06 Score=87.37 Aligned_cols=116 Identities=12% Similarity=-0.049 Sum_probs=100.6
Q ss_pred hhHHHHHHH----HHc---CcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHH--HHHHHH
Q 008251 401 KKKEQGNTL----FKA---GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYK--QAEKLC 471 (572)
Q Consensus 401 ~~k~~G~~~----~~~---g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~--~Ai~~~ 471 (572)
.+..++..+ ... +++.+++..+.++++..|.+.. ++++++.+..+++.|+ +++..|
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~---------------aW~~R~~vl~~l~~~~~~~EL~~~ 169 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHH---------------VWSYRKWLVDTFDLHNDAKELSFV 169 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHH---------------HHHHHHHHHHHhcccChHHHHHHH
Confidence 344555555 444 7899999999999998887653 3889999999999999 999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 008251 472 TKVLDLDSRNVKALYRRAQAYIQMAD------LDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 531 (572)
Q Consensus 472 ~~al~~~p~~~ka~~~~g~a~~~l~~------~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~ 531 (572)
+++++.+|.|..||..|+.++..+++ ++++++++++++.++|+|..+...++-+......
T Consensus 170 ~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 170 DKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 99999999999999999999999998 9999999999999999999999888877665543
No 255
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.36 E-value=4.8e-06 Score=84.62 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=80.1
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|..++..|+|+.|...|.+++.+.+..... .....+++++|.++..+|+|++|+.++++++++
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW---------HYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH---------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34556778888888899999999999998877654321 123445677888888888888888888888775
Q ss_pred C--------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008251 478 D--------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (572)
Q Consensus 478 ~--------p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~ 514 (572)
. |....++.++|.+|..+|++++|...+++++.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 123 INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 4 234567777888888888888888888888877765
No 256
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.34 E-value=2.6e-06 Score=85.11 Aligned_cols=109 Identities=9% Similarity=-0.052 Sum_probs=68.8
Q ss_pred HHHHHHHHcCcHH-HHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCC----------HHHHHHHHH
Q 008251 404 EQGNTLFKAGKYA-RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD----------YKQAEKLCT 472 (572)
Q Consensus 404 ~~G~~~~~~g~~~-~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~----------~~~Ai~~~~ 472 (572)
+.-....+.|+|. +|+..+.+++.++|.+..+ ++.++.+...++. +++++..++
T Consensus 34 ~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~yta---------------Wn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~ 98 (331)
T 3dss_A 34 QAVFQKRQAGELDESVLELTSQILGANPDFATL---------------WNCRREVLQHLETEKSPEESAALVKAELGFLE 98 (331)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHTTCTTCHHH---------------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHH---------------HHHHHHHHHHhcccccchhhhHHHHHHHHHHH
Confidence 3334445678876 7999999999998876533 4444444444433 566666666
Q ss_pred HHHhcCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008251 473 KVLDLDSRNVKALYRRAQAYIQMAD--LDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 473 ~al~~~p~~~ka~~~~g~a~~~l~~--~~~A~~~~~~al~l~P~~~~~~~~l~~l~~ 527 (572)
.+|..+|.|..+|+.|+.++..+++ ++++++.+.++++++|.|-.+....+-+..
T Consensus 99 ~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~ 155 (331)
T 3dss_A 99 SCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAA 155 (331)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 6666666666666666666666663 666666666666666666655555544433
No 257
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.32 E-value=1e-05 Score=80.79 Aligned_cols=100 Identities=13% Similarity=0.019 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 008251 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAEKLCTKVLDLDSRNVKALYRRAQAY 492 (572)
Q Consensus 415 ~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~--~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~ 492 (572)
+.+++..+..++...|.+.. ++++++.+..+++ .|++++..|+++++.||.|..||+.|+.++
T Consensus 90 l~~EL~~~~~~L~~~PKny~---------------aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl 154 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYG---------------TWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVA 154 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHH---------------HHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 78999999999998876553 3789999999998 499999999999999999999999999999
Q ss_pred HhcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 493 IQMAD-LDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 493 ~~l~~-~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
..++. ++++++++.++++.+|.|..+......+...+
T Consensus 155 ~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 155 AQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999 69999999999999999998888887775555
No 258
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.32 E-value=2.9e-06 Score=71.17 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=81.9
Q ss_pred cHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHH---HHHHHHHHHhcC-C-CCHHHHHHH
Q 008251 414 KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ---AEKLCTKVLDLD-S-RNVKALYRR 488 (572)
Q Consensus 414 ~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~---Ai~~~~~al~~~-p-~~~ka~~~~ 488 (572)
....+.+.|.+++...+ . ...+.+|+|.|+.+..+... +|..+..++..+ | .+-.++|.+
T Consensus 16 ~l~~~~~~y~~e~~~~~----~-----------s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~L 80 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGS----V-----------SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYL 80 (126)
T ss_dssp HHHHHHHHHHHHHHHSC----C-----------CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCC----C-----------cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 34556666776654322 1 13457899999999887766 999999999877 5 578999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008251 489 AQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (572)
Q Consensus 489 g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~ 530 (572)
|.+|+++|+|++|+.+++..|+.+|+|..+..+...+..++.
T Consensus 81 Avg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~ 122 (126)
T 1nzn_A 81 AVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 122 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888877766543
No 259
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.31 E-value=1.2e-06 Score=71.22 Aligned_cols=81 Identities=12% Similarity=0.044 Sum_probs=66.3
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (572)
+..+...|..++..|+|++|+..|+++++..|.... +++++|.||.+++++++|+..+++++++.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~---------------a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVG---------------TYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH---------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH---------------HHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 456788999999999999999999999999887553 48899999999999999999999999986
Q ss_pred CC--CHHHHHHHHHHHHh
Q 008251 479 SR--NVKALYRRAQAYIQ 494 (572)
Q Consensus 479 p~--~~ka~~~~g~a~~~ 494 (572)
|. +..+...+...+..
T Consensus 72 ~~~~~~~~~~~l~~~l~~ 89 (100)
T 3ma5_A 72 REEGTQKDLSELQDAKLK 89 (100)
T ss_dssp HHHSCHHHHHHHHHHHHH
T ss_pred hcCCchhHHHHHHHHHHH
Confidence 63 34444444444443
No 260
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.29 E-value=4.3e-06 Score=72.49 Aligned_cols=97 Identities=11% Similarity=-0.059 Sum_probs=80.4
Q ss_pred HHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh----cCCHHHHHHHHHHHHhcCCC
Q 008251 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLCTKVLDLDSR 480 (572)
Q Consensus 405 ~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~ 480 (572)
.|..++..+.+..|+..|++|.+.-. ..+++|+|.+|.. .+++.+|+.+++++.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~-----------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNS-----------------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTC-----------------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 67777777888889999999987521 2457899999998 89999999999999886 7
Q ss_pred CHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008251 481 NVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVKLEY 522 (572)
Q Consensus 481 ~~ka~~~~g~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l 522 (572)
++.+++++|.+|.. .+++++|+.+|++|.+.. +..+...+
T Consensus 92 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l 135 (138)
T 1klx_A 92 DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGIL 135 (138)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHH
Confidence 89999999999999 899999999999999874 44444443
No 261
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.25 E-value=1.5e-06 Score=85.49 Aligned_cols=112 Identities=12% Similarity=-0.047 Sum_probs=87.4
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCC-------------CChHHHHHHH------HHHHHhHhhHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-------------FGDEEKKQAK------ALKVACNLNNAACKL 459 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~-------------~~~e~~~~~~------~~~~~~~~nla~~~~ 459 (572)
+..+...|..+...|++++|+..|.+++...|.... ...+....++ .-...+++++|.++.
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~ 230 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLH 230 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 456778888888888888888888887765442110 0000111111 112457899999999
Q ss_pred hcCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 460 KLKDYKQAEKLCTKVLDLDSRN--VKALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~--~ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
..|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|...|++++.
T Consensus 231 ~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 231 QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999998 99999999999999999999999999885
No 262
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.23 E-value=6.6e-06 Score=68.29 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008251 466 QAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (572)
Q Consensus 466 ~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~ 535 (572)
.|+..++++++.+|+++.+++.+|.+|..+|++++|+..|+++++++|++..+...+..+.....+..++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A 72 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGA 72 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 5789999999999999999999999999999999999999999999999988888888776665544443
No 263
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.18 E-value=3e-06 Score=82.34 Aligned_cols=126 Identities=11% Similarity=-0.030 Sum_probs=95.0
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCC-
Q 008251 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN- 481 (572)
Q Consensus 403 k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~- 481 (572)
...+..+...|+|++|...|..++...|. .. +++++|.++++.++|++|+..++.++...++.
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~p~---------------~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~ 169 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAGSE---------------HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFL 169 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTTCH---------------HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCc---------------hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCccc
Confidence 45577888899999999999987753331 12 57899999999999999999999888763221
Q ss_pred -HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008251 482 -VKALYRRAQAYIQMADLDLAEFDIKKALEID--PD-NRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (572)
Q Consensus 482 -~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~--P~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~f~ 545 (572)
..++|++|.++..+|++++|+.+|++++.-. |. ..++...+..+...+.+.+++. ..|.++..
T Consensus 170 ~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~-~~l~~a~a 236 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAV-ALLEWLQT 236 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHH-HHHHHHHh
Confidence 4689999999999999999999999998654 55 4456666666666655544433 34444443
No 264
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.18 E-value=5.8e-06 Score=82.95 Aligned_cols=114 Identities=10% Similarity=-0.117 Sum_probs=100.2
Q ss_pred hhhHHHHHHHHHcC-cHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc-C-CHHHHHHHHHHHHh
Q 008251 400 GKKKEQGNTLFKAG-KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-K-DYKQAEKLCTKVLD 476 (572)
Q Consensus 400 ~~~k~~G~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~-~-~~~~Ai~~~~~al~ 476 (572)
..+..++..+...+ .+++|+..+..++...|.... +++.++.+..++ + ++++++..|+++|+
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~---------------aW~hR~wlL~~l~~~~~~~EL~~~~k~L~ 153 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQ---------------VWHHRLLLLDRISPQDPVSEIEYIHGSLL 153 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH---------------HHHHHHHHHHHHCCSCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHH---------------HHHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 45677888888888 599999999999998887553 378899998888 7 89999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008251 477 LDSRNVKALYRRAQAYIQMADLD--------LAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~--------~A~~~~~~al~l~P~~~~~~~~l~~l~~~ 528 (572)
.+|.|..||+.|+.++..++.++ ++++.+.++++.+|.|-.+......+...
T Consensus 154 ~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~ 213 (349)
T 3q7a_A 154 PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVS 213 (349)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTT
T ss_pred hCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999888 99999999999999998888777666433
No 265
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.08 E-value=2.2e-05 Score=83.29 Aligned_cols=77 Identities=21% Similarity=0.085 Sum_probs=67.6
Q ss_pred HHhHhhHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCC---CH
Q 008251 448 VACNLNNAACKLK----LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPD---NR 516 (572)
Q Consensus 448 ~~~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~----l~~~~~A~~~~~~al~l~P~---~~ 516 (572)
..+++++|.+|.. .+++++|+.+++++++. .++.+++++|.+|.. .+++++|+.+|++|++.+|+ +.
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~ 440 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTE 440 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCH
Confidence 3468899999999 89999999999999986 579999999999999 89999999999999999955 77
Q ss_pred HHHHHHHHHH
Q 008251 517 DVKLEYKTLK 526 (572)
Q Consensus 517 ~~~~~l~~l~ 526 (572)
.+...+..+.
T Consensus 441 ~a~~~l~~~~ 450 (490)
T 2xm6_A 441 NRNITEKKLT 450 (490)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHhcC
Confidence 7777766653
No 266
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.07 E-value=2.8e-05 Score=65.30 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=71.1
Q ss_pred HhHhhHHHHHHhcCC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKD---YKQAEKLCTKVLDLDSR-NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (572)
Q Consensus 449 ~~~~nla~~~~k~~~---~~~Ai~~~~~al~~~p~-~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~ 524 (572)
.+.+|.|-|+.+..+ ...+|..+...+..+|. .-..+|.+|.+|.++|+|++|+.+++.+|+.+|+|..+..+...
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 456788888888765 45789999999988884 58899999999999999999999999999999999999888887
Q ss_pred HHHHHH
Q 008251 525 LKEKMK 530 (572)
Q Consensus 525 l~~~~~ 530 (572)
+..++.
T Consensus 121 Ie~ki~ 126 (134)
T 3o48_A 121 VEDKIQ 126 (134)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766665
No 267
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.03 E-value=5.2e-05 Score=64.51 Aligned_cols=81 Identities=17% Similarity=0.234 Sum_probs=69.5
Q ss_pred HhHhhHHHHHHhcCC---HHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKD---YKQAEKLCTKVLDLDS-RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (572)
Q Consensus 449 ~~~~nla~~~~k~~~---~~~Ai~~~~~al~~~p-~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~ 524 (572)
.+.+|.|-|+.+..+ -.+++..++..+..+| ..-.++|.+|.+++++++|++|+.+++..|+.+|+|..+..+...
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 446788888888775 4578999999998888 457899999999999999999999999999999999988888776
Q ss_pred HHHHH
Q 008251 525 LKEKM 529 (572)
Q Consensus 525 l~~~~ 529 (572)
+..++
T Consensus 120 Ie~~i 124 (144)
T 1y8m_A 120 VEDKI 124 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 268
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.03 E-value=3.1e-05 Score=78.52 Aligned_cols=107 Identities=9% Similarity=0.002 Sum_probs=89.2
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+..+...|..++..|++..|+..+.+++...+... ......+++++|.++...++++.|+..+.+++
T Consensus 11 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 80 (373)
T 1hz4_A 11 TMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGW----------FYSRIVATSVLGEVLHCKGELTRSLALMQQTE 80 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCc----------hhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 34456677889999999999999999999998765321 12344568899999999999999999999999
Q ss_pred hcCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008251 476 DLDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (572)
Q Consensus 476 ~~~p~~------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~ 512 (572)
.+.+.. ..+++++|.++...|++++|+..|++++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~ 123 (373)
T 1hz4_A 81 QMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLI 123 (373)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 876533 3557899999999999999999999999876
No 269
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.02 E-value=1.5e-05 Score=84.39 Aligned_cols=113 Identities=12% Similarity=0.015 Sum_probs=92.5
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
+..+..+.+.|..+..+|+|++|+..|+++|.+........ .......++|||..|..+|+|++|+..+++|+
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45677888999999999999999999999999865433221 13355668999999999999999999999999
Q ss_pred hc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 476 DL-----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 476 ~~-----~p~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
++ -|++ .+.+-.++.++..++.|.+|...|+++.+-.-+|
T Consensus 421 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~ 468 (490)
T 3n71_A 421 AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNN 468 (490)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 74 4666 4667799999999999999999999986544333
No 270
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.02 E-value=1.7e-05 Score=84.94 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=63.1
Q ss_pred hhhHHHHHHHHH-------cCcHH-------HHHHHHHHHHH-HhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCH
Q 008251 400 GKKKEQGNTLFK-------AGKYA-------RASKRYEKAVK-YIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDY 464 (572)
Q Consensus 400 ~~~k~~G~~~~~-------~g~~~-------~A~~~y~~al~-~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~ 464 (572)
..+...|..+.. .|+++ .|+..|++|++ +.|... .+++++|..+.+.+++
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~---------------~l~~~~~~~~~~~g~~ 337 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNM---------------LLYFAYADYEESRMKY 337 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCH---------------HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccH---------------HHHHHHHHHHHhcCCH
Confidence 455667777765 68887 89999999997 555422 2355666666666666
Q ss_pred HHHHHHHHHHHhcCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 465 KQAEKLCTKVLDLDSRNV-KALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 465 ~~Ai~~~~~al~~~p~~~-ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
++|+..|+++++..|.++ .+|...+.++.+.|++++|++.|++|++..|.+
T Consensus 338 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 338 EKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp HHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred HHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 666666666666666553 455555555555555555555555555554443
No 271
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.00 E-value=3.7e-05 Score=88.56 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC-
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS- 479 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p- 479 (572)
.+...|..++..|+|++|+..|.+|-. |..+|.|+.++++|+.|++.+.+|....+
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~n-----------------------y~rLA~tLvkLge~q~AIEaarKA~n~~aW 1253 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVSN-----------------------FGRLASTLVHLGEYQAAVDGARKANSTRTW 1253 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhhH-----------------------HHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 456799999999999999999998631 77899999999999999999999865443
Q ss_pred ------------------------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 008251 480 ------------------------RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN 533 (572)
Q Consensus 480 ------------------------~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~ 533 (572)
.++..+.+++..|..+|.|++|+..|++++.++|.+.....++..+..+.+..+
T Consensus 1254 kev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~pek 1331 (1630)
T 1xi4_A 1254 KEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQK 1331 (1630)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCCHHH
Confidence 245566788889999999999999999999999999888888887766544333
No 272
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.98 E-value=4.8e-05 Score=81.46 Aligned_cols=112 Identities=12% Similarity=0.123 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-------cCCHH-------HHHHHHHHHHh-cCCC
Q 008251 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-------LKDYK-------QAEKLCTKVLD-LDSR 480 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-------~~~~~-------~Ai~~~~~al~-~~p~ 480 (572)
.+|+..|++|+...|... .+++++|..+.+ +|+++ +|+..+++|++ ++|+
T Consensus 255 ~~a~~~y~~al~~~p~~~---------------~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~ 319 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHP---------------DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK 319 (530)
T ss_dssp HHHHHHHHHHHHHHTTCH---------------HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc
Confidence 478889999999887643 348888888886 78987 99999999998 8999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008251 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR-DVKLEYKTLKEKMKEYNKKEAKFYGNM 543 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~ 543 (572)
+..+|+.+|..+..+|++++|+..|+++++++|.+. .+...+..+..+....+.+ ...|.+.
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A-~~~~~~A 382 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSG-RMIFKKA 382 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHH-HHHHHHH
Confidence 999999999999999999999999999999999985 4666666554444433332 3344443
No 273
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.97 E-value=7.6e-06 Score=84.87 Aligned_cols=87 Identities=14% Similarity=0.082 Sum_probs=72.6
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeecCCCCCceEEEcCCCccchhHHHHHcccccCcEEEEEecCCCccCCCCCCCCCCCC
Q 008251 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (572)
Q Consensus 52 ~~~~gd~V~v~y~~~~~~g~~~~~t~~~~~p~~~~~G~~~~~~g~e~al~gm~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (572)
.++.||.|.|+|+++ .||..|+++.. .++.|.+|.+. + |+++|.||++|+.++|.+.. +|
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF--------------aG 213 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY--------------EG 213 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------TT
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------CC
Confidence 578999999999998 49999998753 68899999887 4 99999999999999999854 35
Q ss_pred CcEEEEEEEeEeeeccccccccceEEE
Q 008251 132 ATLQFDVELLSWTSVKDICKDGGIIKK 158 (572)
Q Consensus 132 ~~l~~~v~l~~~~~~~~~~~d~~v~k~ 158 (572)
.+..|.|+|.++........|..+.+.
T Consensus 214 k~a~F~VtV~~Ik~~~lPEldDEfak~ 240 (433)
T 3gty_X 214 KKYTYKLEVEEVYKRTLPEIGDELAKS 240 (433)
T ss_dssp EEEEEEEEEEEEEEECCCCSSHHHHHT
T ss_pred CeEEEEEEEEEEEEecCCcccHHHHHH
Confidence 799999999999876666666665554
No 274
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.92 E-value=3.2e-05 Score=79.65 Aligned_cols=113 Identities=15% Similarity=0.099 Sum_probs=71.8
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (572)
.+..+...|.++++.|+|+.|++.|.+|.. ..++.+.+.++...++|+.|..+... |..
T Consensus 147 ~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~--------------------~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~ 205 (449)
T 1b89_A 147 NVSNFGRLASTLVHLGEYQAAVDGARKANS--------------------TRTWKEVCFACVDGKEFRLAQMCGLH-IVV 205 (449)
T ss_dssp HTTCHHHHHHHHHTTTCHHHHHHHHHHHTC--------------------HHHHHHHHHHHHHTTCHHHHHHTTTT-TTT
T ss_pred HhhhHHHHHHHHHHhccHHHHHHHHHHcCC--------------------chhHHHHHHHHHHcCcHHHHHHHHHH-HHh
Confidence 344555555555555555555555555521 11233445555555555555443332 222
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q 008251 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNK 534 (572)
Q Consensus 478 ~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~ 534 (572)
++.-+..+..+|.+.|++++|+..|++++.+++.+-.+..++..+..+.+..+-
T Consensus 206 ---~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~ 259 (449)
T 1b89_A 206 ---HADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKM 259 (449)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHH
T ss_pred ---CHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHH
Confidence 334455677889999999999999999999999999999999888666544433
No 275
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.88 E-value=0.00017 Score=63.19 Aligned_cols=118 Identities=13% Similarity=0.093 Sum_probs=89.2
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC--
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-- 478 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-- 478 (572)
.++++...++..+.|+.|+-.+..++.+...+..... ...+..++..+|..++..++|.+|+..|++||...
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~ 95 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKA 95 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 4678888999999999999999999988766554311 23455668899999999999999999999997642
Q ss_pred -CCC----------------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 479 -SRN----------------------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 479 -p~~----------------------~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
+.+ ...-|+.|.||.+++++++|+..++..-. .-....+...|+++
T Consensus 96 l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 96 LSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKINMLLANL 164 (167)
T ss_dssp C--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHHHHHHHH
T ss_pred HhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHHHHHHHH
Confidence 111 26779999999999999999999875321 12244565556554
No 276
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.86 E-value=9.7e-05 Score=63.79 Aligned_cols=93 Identities=16% Similarity=0.032 Sum_probs=79.2
Q ss_pred CcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 008251 413 GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAY 492 (572)
Q Consensus 413 g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~ 492 (572)
+++.+|+..|++|.+.-. .. +. +|.+|.....++.|+.+++++.+. .++.+++++|.+|
T Consensus 9 ~d~~~A~~~~~~aa~~g~--~~---------------a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y 67 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNE--MF---------------GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHTTC--TT---------------HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCC--Hh---------------hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHH
Confidence 578999999999997642 11 13 999999999999999999999986 7899999999999
Q ss_pred Hh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008251 493 IQ----MADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (572)
Q Consensus 493 ~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~ 528 (572)
.. .+++++|+.+|++|.+. .+..+...+..+...
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 99 89999999999999987 577777777776544
No 277
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.81 E-value=0.0002 Score=75.78 Aligned_cols=93 Identities=18% Similarity=0.054 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHH----cCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh----cCCHHHHHHHH
Q 008251 400 GKKKEQGNTLFK----AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLC 471 (572)
Q Consensus 400 ~~~k~~G~~~~~----~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k----~~~~~~Ai~~~ 471 (572)
..+...|..++. .+++.+|+..|++|++... ..+++++|.+|.. .+++++|+.++
T Consensus 76 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~-----------------~~a~~~Lg~~y~~g~g~~~~~~~A~~~~ 138 (490)
T 2xm6_A 76 PAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGL-----------------PQAQQNLGVMYHEGNGVKVDKAESVKWF 138 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-----------------HHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHcCCCCCCCHHHHHHHH
Confidence 345556666666 6666666666666664311 1224445555554 44555555555
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHh
Q 008251 472 TKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEI 511 (572)
Q Consensus 472 ~~al~~~p~~~ka~~~~g~a~~~----l~~~~~A~~~~~~al~l 511 (572)
+++.+. +++.+++++|.+|.. .+++++|+.+|+++++.
T Consensus 139 ~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 139 RLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ 180 (490)
T ss_dssp HHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 555442 345555555555554 44555555555555443
No 278
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.74 E-value=9.2e-05 Score=77.72 Aligned_cols=120 Identities=18% Similarity=0.026 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHcC---cHHHHHHHHHHHHHHhhccCCC--------------ChHHHHHHH------HHHHHhHhhHHHH
Q 008251 401 KKKEQGNTLFKAG---KYARASKRYEKAVKYIEYDTSF--------------GDEEKKQAK------ALKVACNLNNAAC 457 (572)
Q Consensus 401 ~~k~~G~~~~~~g---~~~~A~~~y~~al~~~~~~~~~--------------~~e~~~~~~------~~~~~~~~nla~~ 457 (572)
.+...|..+...| ++.+|+..|+++++..+..... ..+..+.+. .-...+++|+|.+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~g~~~a~~~Lg~~ 257 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQL 257 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHGGGSTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4567788888888 9999999999998764432210 000001111 1122345566666
Q ss_pred -H--HhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008251 458 -K--LKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA-----DLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (572)
Q Consensus 458 -~--~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~-----~~~~A~~~~~~al~l~P~~~~~~~~l~~l~ 526 (572)
+ ...+++++|+.+++++++. .++.+++++|.+|. .| ++++|+.+|++|. |.+..+...+..+.
T Consensus 258 ~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y 328 (452)
T 3e4b_A 258 LYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIY 328 (452)
T ss_dssp HHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHH
Confidence 3 3456666666666666643 36666666666666 44 6666666666666 66666666655543
No 279
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.74 E-value=0.00022 Score=62.07 Aligned_cols=79 Identities=15% Similarity=0.098 Sum_probs=64.7
Q ss_pred HhhhHHHHHHHHHcC---cHHHHHHHHHHHHHHh-hccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 399 AGKKKEQGNTLFKAG---KYARASKRYEKAVKYI-EYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 399 a~~~k~~G~~~~~~g---~~~~A~~~y~~al~~~-~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
.+..++-|..+.+.. ++.+++..++..++.. | ..+..+++|+|..|+++++|.+|+.+|+++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p--------------~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSK--------------EEQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCH--------------HHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc--------------cchHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 355677788888877 7789999999988754 2 124567899999999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHH
Q 008251 475 LDLDSRNVKALYRRAQA 491 (572)
Q Consensus 475 l~~~p~~~ka~~~~g~a 491 (572)
|+.+|+|..|..-+..+
T Consensus 98 L~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 98 LQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHCTTCHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHH
Confidence 99999998887655443
No 280
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.71 E-value=0.00034 Score=70.11 Aligned_cols=114 Identities=12% Similarity=-0.015 Sum_probs=83.0
Q ss_pred hHHHHHHHHHc---CcHHHHHHHHHHHHHHhhccCCC-----------------ChHHHHHHHHHH------------HH
Q 008251 402 KKEQGNTLFKA---GKYARASKRYEKAVKYIEYDTSF-----------------GDEEKKQAKALK------------VA 449 (572)
Q Consensus 402 ~k~~G~~~~~~---g~~~~A~~~y~~al~~~~~~~~~-----------------~~e~~~~~~~~~------------~~ 449 (572)
+.-+|..++.+ ..+.+|+.+|++|+++.|..... .......+.... ..
T Consensus 199 l~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~ 278 (372)
T 3ly7_A 199 NFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSI 278 (372)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHH
Confidence 44455555544 44689999999999988754211 111111111111 12
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~ 516 (572)
++.-+|..++..++++.|+..+++|+.++| +.-+|..+|.++...|++++|++.|.+|+.++|...
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 334467777778999999999999999996 477889999999999999999999999999999875
No 281
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.00015 Score=74.84 Aligned_cols=120 Identities=14% Similarity=0.133 Sum_probs=87.8
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCC------------------ChHHH-HHHH-----------
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF------------------GDEEK-KQAK----------- 444 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~------------------~~e~~-~~~~----------- 444 (572)
.......+...|..++..|+|++|+..|.+++.+.+..... ..+.. ...+
T Consensus 51 ~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 130 (434)
T 4b4t_Q 51 RNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR 130 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC
T ss_pred hhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 33445567899999999999999999999998876542210 01111 0000
Q ss_pred -HHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008251 445 -ALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (572)
Q Consensus 445 -~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~------p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~ 514 (572)
.+...++.++|.+|...|+|.+|+..+++++... +....++...+.+|..+++|++|...|++++.+.+.
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp CSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 1234577889999999999999999998887642 234678889999999999999999999999988644
No 282
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.68 E-value=0.00019 Score=69.10 Aligned_cols=88 Identities=15% Similarity=0.021 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc-----CCHHHHHHHHHHHHhcCCCC-HHHHHHH
Q 008251 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-----KDYKQAEKLCTKVLDLDSRN-VKALYRR 488 (572)
Q Consensus 415 ~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~-----~~~~~Ai~~~~~al~~~p~~-~ka~~~~ 488 (572)
...|....++|+++.|. .+.-.+|.-+|..|.+. |+.++|..++++||+++|+. ..+++..
T Consensus 179 l~~A~a~lerAleLDP~-------------~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~Y 245 (301)
T 3u64_A 179 VHAAVMMLERACDLWPS-------------YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITY 245 (301)
T ss_dssp HHHHHHHHHHHHHHCTT-------------HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-------------cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHH
Confidence 35566666666666554 12345688999999996 99999999999999999975 9999999
Q ss_pred HHHHHh-cCCHHHHHHHHHHHHHhCCCC
Q 008251 489 AQAYIQ-MADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 489 g~a~~~-l~~~~~A~~~~~~al~l~P~~ 515 (572)
|..++. .+++++|...|++|+..+|..
T Consensus 246 A~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 246 ADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 999988 499999999999999988773
No 283
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.65 E-value=0.00022 Score=74.78 Aligned_cols=74 Identities=20% Similarity=0.070 Sum_probs=62.8
Q ss_pred HHhHhhHHHHHHhcC-----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHH
Q 008251 448 VACNLNNAACKLKLK-----DYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDV 518 (572)
Q Consensus 448 ~~~~~nla~~~~k~~-----~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~----l~~~~~A~~~~~~al~l~P~~~~~ 518 (572)
..+++|+|.+|. .| ++.+|+.+++++. +.++.+++++|.+|.. ..++++|+.+|++|.+.. +..+
T Consensus 283 ~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A 356 (452)
T 3e4b_A 283 PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG--QNSA 356 (452)
T ss_dssp HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT--CTTH
T ss_pred HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC--hHHH
Confidence 356889999998 45 9999999999999 9999999999999988 459999999999998754 4557
Q ss_pred HHHHHHHHH
Q 008251 519 KLEYKTLKE 527 (572)
Q Consensus 519 ~~~l~~l~~ 527 (572)
...+..+..
T Consensus 357 ~~~Lg~~y~ 365 (452)
T 3e4b_A 357 DFAIAQLFS 365 (452)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 284
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.00013 Score=75.28 Aligned_cols=100 Identities=11% Similarity=0.034 Sum_probs=75.2
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCC
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN 481 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~ 481 (572)
....|..++..|+|.+|+..+++++......... .....++++++.+|..+++|.+|...+++++...+..
T Consensus 138 ~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 138 SIKLATLHYQKKQYKDSLALINDLLREFKKLDDK---------PSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 4567888888888888888888888776654432 5567789999999999999999999999999875543
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
.......+..+..+|.+..+...|..|..
T Consensus 209 ~~~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 209 YCPTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 33344566677777766666666666654
No 285
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.45 E-value=0.00027 Score=69.48 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=79.4
Q ss_pred HHHHHHHHcC--cHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc----
Q 008251 404 EQGNTLFKAG--KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL---- 477 (572)
Q Consensus 404 ~~G~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~---- 477 (572)
.+|...+..| ++..|...|+++....+... ...+++| |++++|+|++|...++.+++.
T Consensus 181 aea~v~l~~g~~~~q~A~~~f~El~~~~p~~~-------------~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~ 244 (310)
T 3mv2_B 181 AESYIKFATNKETATSNFYYYEELSQTFPTWK-------------TQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSV 244 (310)
T ss_dssp HHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHH-------------HHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHT
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhCCCcc-------------cHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccc
Confidence 3443344445 89999999999876544200 1123445 899999999999999988876
Q ss_pred ------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008251 478 ------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEY 522 (572)
Q Consensus 478 ------~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 522 (572)
+|+|+.++.+++.+...+|+ +|.+.+.++.+++|+++.+....
T Consensus 245 ~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~ 293 (310)
T 3mv2_B 245 EQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQ 293 (310)
T ss_dssp TTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHH
Confidence 58999999999999999998 99999999999999998665443
No 286
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.42 E-value=0.00065 Score=78.47 Aligned_cols=107 Identities=12% Similarity=-0.042 Sum_probs=82.7
Q ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCC--hHHHHHHH-----HHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG--DEEKKQAK-----ALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--~e~~~~~~-----~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
+-|..+...|.|++|...|+++-.........- -..++++. -....+|+++|.++.+.++|++|+..|.+|
T Consensus 1054 eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1054 DIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 448999999999999999999753222100000 00111111 123668999999999999999999999886
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 477 ~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
+++.+|++.|.++.++|+|++|+++|..|.+.+++.
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES 1167 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc
Confidence 889999999999999999999999999999988663
No 287
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.24 E-value=0.0042 Score=63.50 Aligned_cols=126 Identities=13% Similarity=0.049 Sum_probs=101.9
Q ss_pred HhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccC-------CCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLC 471 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~-------~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~ 471 (572)
-..+...|......++...|...|.+|+.+..... .+...+...+.+....+...++.+++.++++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 45556677777788999999999999998764321 12234567788888889999999999999999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-------hCCCCHHHHHHHHHH
Q 008251 472 TKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALE-------IDPDNRDVKLEYKTL 525 (572)
Q Consensus 472 ~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~-------l~P~~~~~~~~l~~l 525 (572)
..++..+|-+..++..+-.+|...|+..+|++.|+++-+ ++|.. +...++..+
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~-~l~~l~~~i 254 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP-TLRALNERI 254 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH-HHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCH-HHHHHHHHH
Confidence 999999999999999999999999999999999988754 35653 444444443
No 288
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.20 E-value=0.00093 Score=65.65 Aligned_cols=122 Identities=7% Similarity=-0.031 Sum_probs=86.6
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC-
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR- 480 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~- 480 (572)
+.-.|..++..|++++|++.+.+++...+.. ....++..++.+++++++.+.|.+.+++..+.+|+
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~-------------~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~ 169 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAE-------------GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDT 169 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCST-------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCc-------------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 3577888899999999999999987654310 12345678899999999999999999999888883
Q ss_pred ---CHHHHHHHHHH--HHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 008251 481 ---NVKALYRRAQA--YIQMA--DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEA 537 (572)
Q Consensus 481 ---~~ka~~~~g~a--~~~l~--~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~~~~~~ 537 (572)
+-..+..++.+ .+..| ++.+|...|+++....|+......++. +...+....++++
T Consensus 170 ~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eAe~ 232 (310)
T 3mv2_B 170 VSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEAQG 232 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHHHH
Confidence 23444555544 66666 899999999998888887333334444 5555555555443
No 289
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.13 E-value=0.00079 Score=53.64 Aligned_cols=68 Identities=21% Similarity=0.151 Sum_probs=57.7
Q ss_pred HhhhHHHHHHHHHcCc---HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 399 AGKKKEQGNTLFKAGK---YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 399 a~~~k~~G~~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
+..+...|..++-.++ ..+|...+++|+.+.|.+. .+++.+|..+++.++|++|+.++++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~---------------rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNE---------------AALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4456677888875555 7999999999999988754 347789999999999999999999999
Q ss_pred hcCCCC
Q 008251 476 DLDSRN 481 (572)
Q Consensus 476 ~~~p~~ 481 (572)
+.+|..
T Consensus 71 ~~~p~~ 76 (93)
T 3bee_A 71 DSNDPN 76 (93)
T ss_dssp TCCCTT
T ss_pred hhCCCC
Confidence 999974
No 290
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.02 E-value=0.0016 Score=67.50 Aligned_cols=94 Identities=9% Similarity=-0.033 Sum_probs=73.2
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
-...+..+.+.|..+..+|+|++|+..|++++.......... .......++|+|..|..+|+|++|+..+.+|
T Consensus 325 h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 325 NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 345678889999999999999999999999998865433221 1345667899999999999999999999999
Q ss_pred Hhc-----CCCCH---HHHHHHHHHHHhc
Q 008251 475 LDL-----DSRNV---KALYRRAQAYIQM 495 (572)
Q Consensus 475 l~~-----~p~~~---ka~~~~g~a~~~l 495 (572)
+++ -|+++ ..+.+++.|+..+
T Consensus 398 l~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 398 FDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 874 46664 4555666666544
No 291
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.89 E-value=0.0028 Score=65.72 Aligned_cols=81 Identities=11% Similarity=-0.021 Sum_probs=65.7
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+..+.+.|..|..+|+|++|+..|++++.+........ .......++|+|..|..+|+|++|+..+++|+
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 44677888999999999999999999999999876543221 13355668899999999999999999999998
Q ss_pred hc-----CCCCHH
Q 008251 476 DL-----DSRNVK 483 (572)
Q Consensus 476 ~~-----~p~~~k 483 (572)
++ -|+++.
T Consensus 410 ~i~~~~lG~~Hp~ 422 (433)
T 3qww_A 410 AIMEVAHGKDHPY 422 (433)
T ss_dssp HHHHHHTCTTCHH
T ss_pred HHHHHHcCCCChH
Confidence 85 466653
No 292
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.62 E-value=0.014 Score=48.76 Aligned_cols=45 Identities=20% Similarity=0.179 Sum_probs=39.1
Q ss_pred HHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 008251 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQ 490 (572)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~ 490 (572)
....|++.+|..++++++|..|+.+|+.+|+.+|+|..|.--+..
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 356778999999999999999999999999999999888654443
No 293
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.61 E-value=0.0056 Score=63.01 Aligned_cols=116 Identities=12% Similarity=0.026 Sum_probs=83.8
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
..+++.+..+...|+|..|..+... +...+. + ...+..+|.+.|.|++|+..++++|.+++
T Consensus 178 ~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad-------~-----------l~~lv~~Yek~G~~eEai~lLe~aL~le~ 238 (449)
T 1b89_A 178 RTWKEVCFACVDGKEFRLAQMCGLH-IVVHAD-------E-----------LEELINYYQDRGYFEELITMLEAALGLER 238 (449)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHH-------H-----------HHHHHHHHHHTTCHHHHHHHHHHHTTSTT
T ss_pred hhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHh-------h-----------HHHHHHHHHHCCCHHHHHHHHHHHhCCcH
Confidence 3457777888889999999666654 212111 1 22578899999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHH
Q 008251 480 RNVKALYRRAQAYIQM--ADLDLAEFDIKKALEIDP-----DNRDVKLEYKTLKEKMKEYNK 534 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l--~~~~~A~~~~~~al~l~P-----~~~~~~~~l~~l~~~~~~~~~ 534 (572)
.+...+..+|.+|.+- ++..++++.|-..+.+.| ++...+.++.-+.....+.+.
T Consensus 239 ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~ 300 (449)
T 1b89_A 239 AHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDN 300 (449)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHH
Confidence 9999999999988764 567777777776666666 555555555555544444443
No 294
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=96.46 E-value=0.0052 Score=63.50 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=58.9
Q ss_pred CCCCCCeEEEEEEEEeCCCeEeeec--cceEEEeCCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCC
Q 008251 168 NPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAV 245 (572)
Q Consensus 168 ~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~vp~~~~~g~~~~~~~~~~~~i 245 (572)
.+..||.|+++|.+.. +|..|+++ .++.+.+|.+. + |+++|.||++|++.+|.+ .|
T Consensus 154 ~a~~gD~V~id~~~~~-dG~~~~~~~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~v----tF-------------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-EEGKKLTSREYEYVISEDEDR--P-FVKDLVGKKKGDVVEIER----EY-------------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEEC-TTSCEEEEEEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEE----EE--------------
T ss_pred ccCCCCEEEEEEEEEE-CCEECcCCCCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEE----ee--------------
Confidence 4678999999999884 88888865 56667778776 4 999999999999999998 23
Q ss_pred CCCCeEEEEEEEecccc
Q 008251 246 PPNATLQIALELVSWKT 262 (572)
Q Consensus 246 p~~~~l~~~v~l~~~~~ 262 (572)
+|.+..|.|.|..+..
T Consensus 212 -aGk~a~F~VtV~~Ik~ 227 (433)
T 3gty_X 212 -EGKKYTYKLEVEEVYK 227 (433)
T ss_dssp -TTEEEEEEEEEEEEEE
T ss_pred -CCCeEEEEEEEEEEEE
Confidence 3567899999988754
No 295
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.42 E-value=0.029 Score=47.06 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=39.3
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA 491 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a 491 (572)
+..|++.+|..++|+|+|..|+.+|+.+|+.+|+|..|.--+..+
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 566789999999999999999999999999999998886554443
No 296
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.41 E-value=0.043 Score=46.62 Aligned_cols=74 Identities=16% Similarity=0.110 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCc---HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 403 KEQGNTLFKAGK---YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 403 k~~G~~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
++-+-.+.+..+ -.+++..++..++..+ . .+..|++.+|..++|+++|..|..+|+.+|+.+|
T Consensus 43 F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~---~-----------~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP 108 (144)
T 1y8m_A 43 FNYAWGLIKSTDVNDERLGVKILTDIYKEAE---S-----------RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER 108 (144)
T ss_dssp HHHHHHHHHSSSHHHHHHHHHHHHHHHHHCC---S-----------THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc---c-----------chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 344444554443 3456666666554211 1 2456789999999999999999999999999999
Q ss_pred CCHHHHHHHHH
Q 008251 480 RNVKALYRRAQ 490 (572)
Q Consensus 480 ~~~ka~~~~g~ 490 (572)
+|..|.--+..
T Consensus 109 ~n~QA~~Lk~~ 119 (144)
T 1y8m_A 109 NNKQVGALKSM 119 (144)
T ss_dssp CCHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99877654433
No 297
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.06 E-value=0.027 Score=49.26 Aligned_cols=94 Identities=18% Similarity=0.175 Sum_probs=62.1
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCCh-------H-HHHH--HHHHHHHhHhhHHHHHHhcCCHHHH
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD-------E-EKKQ--AKALKVACNLNNAACKLKLKDYKQA 467 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~-------e-~~~~--~~~~~~~~~~nla~~~~k~~~~~~A 467 (572)
.++.+...|+.+|..++|.+|...|++||........... + .... ...--..+.+.+|.||.+++++++|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 4667889999999999999999999999987653211100 0 0000 0000124567899999999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHH
Q 008251 468 EKLCTKVLDLDSRNVKALYRRAQAY 492 (572)
Q Consensus 468 i~~~~~al~~~p~~~ka~~~~g~a~ 492 (572)
+...+.+-. ....++.-.-+|+.|
T Consensus 142 i~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 998765322 234567666666654
No 298
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=95.94 E-value=0.013 Score=56.49 Aligned_cols=63 Identities=11% Similarity=0.083 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Q 008251 463 DYKQAEKLCTKVLDLDSR--NVKALYRRAQAYIQM-----ADLDLAEFDIKKALEIDPDN-RDVKLEYKTL 525 (572)
Q Consensus 463 ~~~~Ai~~~~~al~~~p~--~~ka~~~~g~a~~~l-----~~~~~A~~~~~~al~l~P~~-~~~~~~l~~l 525 (572)
....|....++|+++||+ +..||.-+|..|..+ |+.++|.++|++|++++|+. ..+...+..-
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~ 248 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADA 248 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHH
Confidence 467899999999999999 677999999999996 99999999999999999975 6666666654
No 299
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.80 E-value=0.17 Score=55.35 Aligned_cols=123 Identities=10% Similarity=0.009 Sum_probs=75.7
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHhhcc-------CCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH
Q 008251 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYD-------TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (572)
Q Consensus 403 k~~G~~~~~~g~~~~A~~~y~~al~~~~~~-------~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (572)
...+......|+++.|...|++++..++.. ...+++.......-...++...+.+..+.+..+.|...+.+|+
T Consensus 382 l~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~ 461 (679)
T 4e6h_A 382 FSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCR 461 (679)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344555567789999999999999865310 0111112222222233456666666666777777777777777
Q ss_pred hc-CCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 476 DL-DSRNVKALYRRAQAYIQMAD-LDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 476 ~~-~p~~~ka~~~~g~a~~~l~~-~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
+. .+...+.|...|......++ ++.|+..|+++++..|++......+...
T Consensus 462 ~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~f 513 (679)
T 4e6h_A 462 RLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDF 513 (679)
T ss_dssp HTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 76 33445666666666555543 7777777777777777776655444443
No 300
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.52 E-value=0.06 Score=59.03 Aligned_cols=99 Identities=16% Similarity=0.067 Sum_probs=77.9
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcC-CHHHHHHHHHHHHhcCCC
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-DYKQAEKLCTKVLDLDSR 480 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~-~~~~Ai~~~~~al~~~p~ 480 (572)
+...++...+.++.+.|...|.+|++..+... ..+|...|....+.+ +++.|...|.++|+..|+
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~--------------~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~ 502 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT--------------PDIYLENAYIEYHISKDTKTACKVLELGLKYFAT 502 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC--------------THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC--------------hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC
Confidence 44445555567888999999999988633221 123445566666654 599999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008251 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~ 514 (572)
++..+...+......++.+.|+..|++|+...|+
T Consensus 503 ~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 503 DGEYINKYLDFLIYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 9999888888888999999999999999999884
No 301
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.05 E-value=0.46 Score=40.71 Aligned_cols=94 Identities=12% Similarity=0.019 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Q 008251 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQM 495 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l 495 (572)
++-++.|++|+...|..... ...-.+.++.+.|.. ...++.++|...|+.++.++...++.|...|+--.+.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~-------~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRq 107 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYG-------QNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQ 107 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGT-------TCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCccccc-------cHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 77789999999988765311 112234445555644 5668999999999999998888899999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH
Q 008251 496 ADLDLAEFDIKKALEIDPDNRD 517 (572)
Q Consensus 496 ~~~~~A~~~~~~al~l~P~~~~ 517 (572)
|+...|++.+.+|+.+.|...+
T Consensus 108 gnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 108 GNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp TCHHHHHHHHHHHHHTTCBCHH
T ss_pred ccHHHHHHHHHHHhccCCCcHH
Confidence 9999999999999999999854
No 302
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=94.97 E-value=0.14 Score=49.70 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=79.4
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCH----HHHHHHHHHH--
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDY----KQAEKLCTKV-- 474 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~----~~Ai~~~~~a-- 474 (572)
...+.|-.++..|+|.+|+..|..+|..++-....+.++..+++++...|.-.+-.+-+.+.+- +...+.++-+
T Consensus 116 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAY 195 (325)
T 3mv2_A 116 EKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAY 195 (325)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 3556899999999999999999999999887665566777788887777665554444443211 1112222222
Q ss_pred ---HhcCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 008251 475 ---LDLDSRNV-KALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD 517 (572)
Q Consensus 475 ---l~~~p~~~-ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~ 517 (572)
..+.|.+. -++..--...++.++|--|....++.|++.|..+.
T Consensus 196 FT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 242 (325)
T 3mv2_A 196 FTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPR 242 (325)
T ss_dssp GGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHH
T ss_pred hccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 22344443 33333344577899999999999999999997643
No 303
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=94.79 E-value=0.25 Score=47.92 Aligned_cols=114 Identities=15% Similarity=0.267 Sum_probs=80.6
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhc--CC-----HHHHHHHHHHH
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL--KD-----YKQAEKLCTKV 474 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~--~~-----~~~Ai~~~~~a 474 (572)
..+.|-.++..|+|.+|+..|..+|..++-....+.++..+++++...|.-.+-.+-+.+ ++ .+...+.++-+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 467899999999999999999999999987766677788888888777766555444444 22 12323333333
Q ss_pred H-----hcCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 475 L-----DLDSRNVK-ALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 475 l-----~~~p~~~k-a~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
- .+.|.|.- ++..--...++.++|--|....++.|++.|..
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 231 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKP 231 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 2 23444433 33333445778999999999999999999874
No 304
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.65 E-value=0.22 Score=54.84 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=52.8
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKA 508 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~a 508 (572)
++.-.|.-++..++|+.|+..+++|+..-|..-..|++++.||..+++|+.|+-.+..+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 34445666778899999999999999999999999999999999999999999887766
No 305
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.15 E-value=0.29 Score=42.58 Aligned_cols=95 Identities=17% Similarity=0.112 Sum_probs=68.5
Q ss_pred HHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh--c--C--
Q 008251 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD--L--D-- 478 (572)
Q Consensus 405 ~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~--~--~-- 478 (572)
.+-.+|-.|+|.+|+-... .... .+..+.-+.||.++++|..|+......|+ . |
T Consensus 39 ~~I~LyyngEY~R~Lf~L~-------~lNT-------------~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~ 98 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLH-------KLNT-------------CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPD 98 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHH-------TCCB-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCC
T ss_pred hhhhhhhcchHhHHHHHHH-------hcch-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc
Confidence 4556666777666654433 2221 23356789999999999999999999993 2 2
Q ss_pred -----------CCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 008251 479 -----------SRNVK-ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVK 519 (572)
Q Consensus 479 -----------p~~~k-a~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~ 519 (572)
|.+.. .+.-+|..+.+.|+-+||+.+|.+....+|=-..+.
T Consensus 99 ~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 99 VDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp CCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 22333 344689999999999999999999998887765544
No 306
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.09 E-value=0.46 Score=48.11 Aligned_cols=99 Identities=14% Similarity=-0.007 Sum_probs=80.5
Q ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC---CC
Q 008251 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD---SR 480 (572)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~---p~ 480 (572)
..|..++..|+|.+|+..+.+.++.+..... ......+++.....|..++++.++...+.+|.... +.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 6789999999999999999999998876432 25677889999999999999999999998886542 12
Q ss_pred C----HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHh
Q 008251 481 N----VKALYRRAQAYI-QMADLDLAEFDIKKALEI 511 (572)
Q Consensus 481 ~----~ka~~~~g~a~~-~l~~~~~A~~~~~~al~l 511 (572)
+ .....--|..|+ ..++|..|..+|-.+++-
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 2 344456788888 899999999999888743
No 307
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.85 E-value=0.21 Score=51.59 Aligned_cols=101 Identities=12% Similarity=-0.003 Sum_probs=80.0
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc---
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL--- 477 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~--- 477 (572)
.+...|..+++.|++..|++.|.++......... +..+++++..+++..++|..|..+++++..+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~------------kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA------------KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH------------HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 4678999999999999999999998887654322 4567888889999999999999999998654
Q ss_pred CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008251 478 DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (572)
Q Consensus 478 ~p~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P 513 (572)
.++. .+.....|..++..++|.+|-..|-.++....
T Consensus 201 ~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 201 GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp CCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 2221 24455678888899999999999988776543
No 308
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.54 E-value=0.5 Score=44.72 Aligned_cols=70 Identities=11% Similarity=0.117 Sum_probs=62.4
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 456 ACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 456 ~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
...++.++.+.|+..+...++.+|.|.+.-.-+.+.++-.|+++.|.+.++.+.+++|+.......++.+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 3456889999999999999999999999999999999999999999999999999999987655555544
No 309
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.52 E-value=0.21 Score=50.01 Aligned_cols=65 Identities=6% Similarity=-0.053 Sum_probs=54.1
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q 008251 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNV 482 (572)
Q Consensus 403 k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ 482 (572)
...|..++-.|+++.|+..+++|+.+.+. ...|..+|.++.-.|++++|+..+.+|+.++|...
T Consensus 281 ~alal~~l~~gd~d~A~~~l~rAl~Ln~s----------------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 281 QIKAVSALVKGKTDESYQAINTGIDLEMS----------------WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCCC----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 34556677789999999999999998642 12366789999999999999999999999999875
Q ss_pred H
Q 008251 483 K 483 (572)
Q Consensus 483 k 483 (572)
.
T Consensus 345 t 345 (372)
T 3ly7_A 345 T 345 (372)
T ss_dssp H
T ss_pred h
Confidence 3
No 310
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.94 E-value=0.69 Score=48.37 Aligned_cols=82 Identities=11% Similarity=-0.003 Sum_probs=72.2
Q ss_pred HHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
....++.++|.+..-...+..|..+|.+|+.+.|++...|..+|..+...++.-+|+-+|-+++....-...++..+..+
T Consensus 150 ~~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~ 229 (497)
T 1ya0_A 150 ICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHH
Confidence 34557788999998899999999999999999999999999999999999999999999999998876677777777665
Q ss_pred HH
Q 008251 526 KE 527 (572)
Q Consensus 526 ~~ 527 (572)
-.
T Consensus 230 f~ 231 (497)
T 1ya0_A 230 LS 231 (497)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 311
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=92.72 E-value=1.3 Score=46.41 Aligned_cols=117 Identities=13% Similarity=-0.002 Sum_probs=80.2
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCCh---------HHHHHH----------------HHHHHHhHhhHH
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD---------EEKKQA----------------KALKVACNLNNA 455 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~---------e~~~~~----------------~~~~~~~~~nla 455 (572)
.+..-+..+...|+.+.|...|.+|+.. |......- +....+ ......++.+.+
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 3455666777889999999999999998 65431110 000000 011224566667
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHH
Q 008251 456 ACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA-DLDLAEFDIKKALEIDPDNRDVK 519 (572)
Q Consensus 456 ~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~-~~~~A~~~~~~al~l~P~~~~~~ 519 (572)
....+.++.+.|...+.+| ...+.....|...|......+ +.+.|+..|+.+++..|+++...
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~ 357 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLK 357 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHH
Confidence 7777788899999999999 433335666766676666666 59999999999999999886543
No 312
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.01 E-value=1.1 Score=45.38 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=89.8
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhh-------------------ccCCCChHH---------HH---HHHHHHH
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIE-------------------YDTSFGDEE---------KK---QAKALKV 448 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~-------------------~~~~~~~e~---------~~---~~~~~~~ 448 (572)
....+.|..+.+.|++++-.........++. ..+...+.. |. ....++.
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~ 99 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999998887777755433322 111111111 11 1223455
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC---CCCHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR------NVKALYRRAQAYIQMADLDLAEFDIKKALEID---PDNRDVK 519 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~------~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~---P~~~~~~ 519 (572)
.+-..+|..|+..++|.+|+..+.++++.... -...+....+.|..++++.++.+.|.+|.... +-++.+.
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~ 179 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQ 179 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHH
Confidence 55668999999999999999999988774221 25678889999999999999999999998764 3455666
Q ss_pred HHHHHHHHHHHH
Q 008251 520 LEYKTLKEKMKE 531 (572)
Q Consensus 520 ~~l~~l~~~~~~ 531 (572)
..+..+.-....
T Consensus 180 a~i~~~~Gi~~l 191 (394)
T 3txn_A 180 GALDLQSGILHA 191 (394)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhhHHHH
Confidence 666665444444
No 313
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.35 E-value=0.56 Score=35.93 Aligned_cols=40 Identities=23% Similarity=0.171 Sum_probs=34.5
Q ss_pred ChHH-HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhh
Q 008251 391 NTEE-KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (572)
Q Consensus 391 ~~~e-~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (572)
+..+ .+..|..+..+|...=+.|+|.+|+.+|..|++++-
T Consensus 2 ~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 2 SAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 4444 567888999999999999999999999999998754
No 314
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=89.59 E-value=1.3 Score=41.90 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH
Q 008251 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK 483 (572)
Q Consensus 406 G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k 483 (572)
...+++.+.++.|+......++-.|.+... ...+.+.+.-.|+|++|...++.+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~---------------R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASL---------------RSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHH---------------HHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHH---------------HHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 346889999999999999999988876532 345556666779999999999999999998743
No 315
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.48 E-value=4.4 Score=41.68 Aligned_cols=105 Identities=14% Similarity=0.063 Sum_probs=78.7
Q ss_pred HHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh-
Q 008251 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD- 476 (572)
Q Consensus 398 ~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~- 476 (572)
.|.-....+..++..|+|.+|.........-... ... ...++.+++.....|+..++|..|...++++..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~--~~~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYG--SME-------MSEKIQFILEQMELSILKGDYSQATVLSRKILKK 206 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCS--SSC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh--ccc-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3455567889999999999999999887643221 111 234566777888899999999999999998742
Q ss_pred --cCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008251 477 --LDSRN----VKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (572)
Q Consensus 477 --~~p~~----~ka~~~~g~a~~~l~~~~~A~~~~~~al~l 511 (572)
..+.+ ...+.-.|..+...++|.+|-.+|..++..
T Consensus 207 ~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 207 TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 22333 345667888999999999999999888764
No 316
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=88.60 E-value=3.1 Score=43.48 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008251 464 YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (572)
Q Consensus 464 ~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~ 524 (572)
...+...|+++|...|.+++.|+..+.-+...++.++|...|++|+.. |.+..+...+..
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 456778999999999999999999999999999999999999999999 998665544433
No 317
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=88.50 E-value=1.3 Score=36.35 Aligned_cols=45 Identities=27% Similarity=0.316 Sum_probs=37.6
Q ss_pred ccCCChH-HHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 387 SWDMNTE-EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 387 ~~~~~~~-e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
..+|+.. ..+..|..+..+|...=..++|.+|+.+|..|++++-.
T Consensus 5 ~~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 5 SSGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 3456555 67788889999999999999999999999999997654
No 318
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=88.14 E-value=0.5 Score=51.94 Aligned_cols=60 Identities=20% Similarity=0.181 Sum_probs=51.7
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
.-+..++..+..+|+|+.|+.+-++|+.+.|..- .+++.||.||.++++|+.|+-.++-.
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF---------------~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSF---------------ESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhh---------------HHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3566788889999999999999999999988643 34889999999999999999877665
No 319
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=85.98 E-value=1.1 Score=34.16 Aligned_cols=38 Identities=24% Similarity=0.155 Sum_probs=34.0
Q ss_pred HHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhh
Q 008251 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (572)
Q Consensus 393 ~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (572)
...+..|..+..+|...=+.|+|.+|+.+|..|++++-
T Consensus 13 ~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 13 VMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 45678889999999999999999999999999998754
No 320
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=84.45 E-value=2.2 Score=32.68 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=34.5
Q ss_pred CChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 390 MNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 390 ~~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
|+....+..|..+..+|...=..|+|.+|+.+|..|++++-.
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 443445667888899999999999999999999999997543
No 321
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.27 E-value=1.6 Score=45.52 Aligned_cols=69 Identities=14% Similarity=0.029 Sum_probs=57.3
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC--CC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS--RN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p--~~---~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
...+++-+-..|+..+.|+.|....+++.--.. .| ...+|..|+.+...++|.+|.++|..|++..|.+
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 345667778899999999999999999853211 12 6788899999999999999999999999998865
No 322
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=83.44 E-value=3.8 Score=36.13 Aligned_cols=81 Identities=7% Similarity=-0.082 Sum_probs=46.9
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
..++..|......|++.-|.++|.++-++ ..+...|.-.|+-+.-....+.+.....
T Consensus 35 ~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-----------------------~~L~~Ly~~tg~~e~L~kla~iA~~~g~ 91 (177)
T 3mkq_B 35 ITWERLIQEALAQGNASLAEMIYQTQHSF-----------------------DKLSFLYLVTGDVNKLSKMQNIAQTRED 91 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCH-----------------------HHHHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhCCH-----------------------HHHHHHHHHhCCHHHHHHHHHHHHHCcc
Confidence 46788888888888888888888875432 2333444444554443333333333211
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 008251 480 RNVKALYRRAQAYIQMADLDLAEFDIKKA 508 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l~~~~~A~~~~~~a 508 (572)
+.....+++.+|+++++++.|.+.
T Consensus 92 -----~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 92 -----FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp -----HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 122344566777777777776543
No 323
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=83.37 E-value=13 Score=38.71 Aligned_cols=101 Identities=5% Similarity=-0.038 Sum_probs=75.8
Q ss_pred hHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC-CC
Q 008251 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-SR 480 (572)
Q Consensus 402 ~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-p~ 480 (572)
+...-..+.+.|+++.|.+.|.+..+.-- .+ ....|+.+-.+|.+.|++++|...++...+.. .-
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~-~P-------------d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P 173 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGI-QP-------------RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP 173 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTC-CC-------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCC-CC-------------ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC
Confidence 34445677788999999999988664311 01 12346677788889999999999999887653 34
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCH
Q 008251 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEI--DPDNR 516 (572)
Q Consensus 481 ~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l--~P~~~ 516 (572)
+...|.-+-.+|.+.|+.++|.+.|++..+. .|+..
T Consensus 174 d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~ 211 (501)
T 4g26_A 174 EEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKS 211 (501)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHH
T ss_pred CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 6778888999999999999999999987654 46543
No 324
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=82.87 E-value=4.3 Score=31.64 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=32.4
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
.+..|..+..+|..+=+.|+|.+|+.+|..|++++-.
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3557888899999999999999999999999997654
No 325
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=81.41 E-value=5.2 Score=30.66 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=30.2
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
..|..+..+|..+-..|+|++|+.+|..|++++-.
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999999987653
No 326
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.61 E-value=4.2 Score=47.40 Aligned_cols=106 Identities=10% Similarity=0.005 Sum_probs=73.9
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCCh--HHHHHHH------HHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAK------ALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 403 k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--e~~~~~~------~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
.-+|..++..|++++|..+|.+|..-+........ .....+. ......|+.++..+.+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 66889999999999999999998654322221111 1111110 112234666777888889999999999999
Q ss_pred HhcCCCC-H----HHHHHHHHHHHhcCCHHHHHHHHHHH
Q 008251 475 LDLDSRN-V----KALYRRAQAYIQMADLDLAEFDIKKA 508 (572)
Q Consensus 475 l~~~p~~-~----ka~~~~g~a~~~l~~~~~A~~~~~~a 508 (572)
|+..+.+ . ..|.+.-++++.+++|++|...+...
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 9875433 2 25788999999999999998877543
No 327
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=80.37 E-value=22 Score=37.07 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=60.1
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLD-SRNVKALYRRAQAYIQMADLDLAEFDIKKALEI--DPDNRDVKLEYK 523 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l--~P~~~~~~~~l~ 523 (572)
..|+.+-.+|.+.+++++|+..+++..+.. .-+...|.-+-.+|.+.|+.++|.+.|+...+. .|+.......+.
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~ 183 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLK 183 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 347788889999999999999999887653 347788889999999999999999999988764 566544444443
No 328
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=79.23 E-value=5.9 Score=41.33 Aligned_cols=80 Identities=10% Similarity=-0.057 Sum_probs=68.6
Q ss_pred hhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 008251 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (572)
Q Consensus 400 ~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (572)
..+...|...--+..+..|...|.+|+.+.|..... |+.+|.++...+++-.|+-+|.++|....
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~---------------~nqLavla~~~~~~l~a~y~y~rsl~~~~ 217 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQP---------------YNQLAILASSKGDHLTTIFYYCRSIAVKF 217 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHH---------------HHHHHHHHHHTTCHHHHHHHHHHHHSSSB
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCch---------------HHHHHHHHhcccccHHHHHHHHHHHhcCC
Confidence 345778888888888999999999999999986643 88999999999999999999999998877
Q ss_pred CCHHHHHHHHHHHHh
Q 008251 480 RNVKALYRRAQAYIQ 494 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~ 494 (572)
..+.|.-++...+.+
T Consensus 218 Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 218 PFPAASTNLQKALSK 232 (497)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHH
Confidence 788888887777765
No 329
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.99 E-value=10 Score=30.59 Aligned_cols=73 Identities=11% Similarity=0.084 Sum_probs=57.2
Q ss_pred HHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhcc-------CCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHH
Q 008251 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-------TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ 466 (572)
Q Consensus 394 e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~-------~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~ 466 (572)
.....|-.+.++|-..=..|+-+.|+..|++++..+..- .....+.|+.++.+..+...||..+.-+++....
T Consensus 17 ~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~ 96 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEK 96 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445667778888888888899999999999999876532 2245688999999999999999998877765444
No 330
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=77.91 E-value=13 Score=37.34 Aligned_cols=75 Identities=13% Similarity=-0.015 Sum_probs=57.4
Q ss_pred hHHHHHHhcCCHHHHHHHHHHHHhcCCC----------C------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 453 NNAACKLKLKDYKQAEKLCTKVLDLDSR----------N------------VKALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 453 nla~~~~k~~~~~~Ai~~~~~al~~~p~----------~------------~ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
..|......++...|+..+.+|+.+... . ..++..++.+++.+|++.+|+..+.+++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3344444567889999999999887521 1 14556788999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHH
Q 008251 511 IDPDNRDVKLEYKTLKE 527 (572)
Q Consensus 511 l~P~~~~~~~~l~~l~~ 527 (572)
.+|-+..+...+-.+..
T Consensus 200 ~~P~~E~~~~~lm~al~ 216 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYY 216 (388)
T ss_dssp HSTTCHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 99999877777665543
No 331
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=77.88 E-value=6.4 Score=43.34 Aligned_cols=24 Identities=17% Similarity=0.043 Sum_probs=17.9
Q ss_pred HhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 451 NLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
+.++|..+++.++++.|+..|.++
T Consensus 684 W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 684 WRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHc
Confidence 557777777777777777777764
No 332
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.78 E-value=3.4 Score=42.28 Aligned_cols=76 Identities=16% Similarity=0.102 Sum_probs=60.9
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDS---RNVKALYRRAQAYIQMADLDLAEFDIKKALEID--PDNRDVKLEYKT 524 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p---~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~--P~~~~~~~~l~~ 524 (572)
++..+|..|++.|+++.|++.+.++..... .....++...++++..++|..|...+.++..+- ..++..+..++.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 466899999999999999999999887653 337899999999999999999999999997663 334444444444
Q ss_pred H
Q 008251 525 L 525 (572)
Q Consensus 525 l 525 (572)
+
T Consensus 213 ~ 213 (429)
T 4b4t_R 213 Y 213 (429)
T ss_dssp H
T ss_pred H
Confidence 4
No 333
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.16 E-value=25 Score=35.94 Aligned_cols=85 Identities=16% Similarity=0.167 Sum_probs=62.6
Q ss_pred HHHhHhhHHHHHHhcCCHHHHHHHHHHHHh----cCCC--CHHHHHHHHHHHHhcCCHHHHHHHHHHHHH---hCCCCHH
Q 008251 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLD----LDSR--NVKALYRRAQAYIQMADLDLAEFDIKKALE---IDPDNRD 517 (572)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~----~~p~--~~ka~~~~g~a~~~l~~~~~A~~~~~~al~---l~P~~~~ 517 (572)
+..+...||..|...|+|.+|......+.. .++. -...+....+.|+..++|..|...++++.. -.+.++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 455567899999999999999999988653 1221 256788899999999999999999999742 3455666
Q ss_pred HHHHHHHHHHHHHH
Q 008251 518 VKLEYKTLKEKMKE 531 (572)
Q Consensus 518 ~~~~l~~l~~~~~~ 531 (572)
.+..+..+..++..
T Consensus 216 lk~~~~~~~~~~~~ 229 (445)
T 4b4t_P 216 LKLEYYNLLVKISL 229 (445)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66655555444433
No 334
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=74.14 E-value=5.5 Score=30.58 Aligned_cols=37 Identities=27% Similarity=0.424 Sum_probs=32.1
Q ss_pred HHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
-+..|..+-.++..+.+.|+|++||.++.+|..++..
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3556888888999999999999999999999987764
No 335
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=74.10 E-value=7 Score=40.15 Aligned_cols=103 Identities=6% Similarity=-0.004 Sum_probs=68.8
Q ss_pred CcHHHHHHHHHHHHHHhhccCCCChHHH-HHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhc--------CC--CC
Q 008251 413 GKYARASKRYEKAVKYIEYDTSFGDEEK-KQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL--------DS--RN 481 (572)
Q Consensus 413 g~~~~A~~~y~~al~~~~~~~~~~~e~~-~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~--------~p--~~ 481 (572)
...+.|.+...++...+-.+.....++. ..-+.....+.+++-.+|+++++...|....+..-.. .| .-
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 3467788888888877655443211110 0112233334557779999999988887766543221 12 12
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-CCCC
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKALEI-DPDN 515 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al~l-~P~~ 515 (572)
+..+|..|+.++..++|.+|.++|..|++. -|.+
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 578899999999999999999999999998 7765
No 336
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=73.76 E-value=8 Score=34.08 Aligned_cols=46 Identities=17% Similarity=0.136 Sum_probs=39.6
Q ss_pred HhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008251 459 LKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (572)
Q Consensus 459 ~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al 509 (572)
+..|+++.|.+.|+.. ++...|-++|.+.+..|+++-|..+|+++-
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 4679999999988765 678899999999999999999999998763
No 337
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=73.41 E-value=16 Score=30.74 Aligned_cols=61 Identities=18% Similarity=0.117 Sum_probs=43.6
Q ss_pred HhhHHHHHHhc-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008251 451 NLNNAACKLKL-KDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (572)
Q Consensus 451 ~~nla~~~~k~-~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l 511 (572)
|.++|.-++-. ++-+.--+.+...+...+-++..++.+|.||.++|+..+|.+.+++|-+.
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 55666655543 44444334444445666778999999999999999999999999998764
No 338
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=69.37 E-value=34 Score=25.98 Aligned_cols=11 Identities=27% Similarity=0.332 Sum_probs=5.4
Q ss_pred HHHHHHhCCCC
Q 008251 505 IKKALEIDPDN 515 (572)
Q Consensus 505 ~~~al~l~P~~ 515 (572)
|..+++.+|+.
T Consensus 46 ll~alk~e~d~ 56 (86)
T 4a5x_A 46 LLQVLKGTKDN 56 (86)
T ss_dssp HHHHHHTCCCH
T ss_pred HHHHHhhCCCH
Confidence 44444555554
No 339
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=69.16 E-value=7.2 Score=29.95 Aligned_cols=28 Identities=21% Similarity=0.126 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKAL 509 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al 509 (572)
+..+-|+|..+++.|+|++|+++.++|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4556688888888888888877665554
No 340
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=68.40 E-value=23 Score=26.93 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=28.9
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~ 428 (572)
..|..+..+|..+|+.++|.+|+..|.++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56778899999999999999999999998864
No 341
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=68.35 E-value=13 Score=40.80 Aligned_cols=49 Identities=20% Similarity=0.087 Sum_probs=26.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHH-------------HHHHhcCCHHHHHHHHHH
Q 008251 454 NAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRA-------------QAYIQMADLDLAEFDIKK 507 (572)
Q Consensus 454 la~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g-------------~a~~~l~~~~~A~~~~~~ 507 (572)
...||.+.++|..+...+.. ..+.+.+-+++ .+|+++|++++|++.|.+
T Consensus 700 A~~~y~~~~d~~~l~~l~~~-----~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 700 AIEAFTNAHDLESLFLLHSS-----FNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHTCHHHHHHHHHH-----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHccChhhhHHHHHH-----cCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 46677777888777665543 22333333332 345556666666665543
No 342
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=67.99 E-value=90 Score=30.40 Aligned_cols=110 Identities=16% Similarity=0.135 Sum_probs=62.7
Q ss_pred HHHHHHHhhhHHHHHHHHHcCcHHHHHHHHH-HHHHHhhccCCCChHHHHHHHHHHHHh------------HhhHHHHHH
Q 008251 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYE-KAVKYIEYDTSFGDEEKKQAKALKVAC------------NLNNAACKL 459 (572)
Q Consensus 393 ~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~-~al~~~~~~~~~~~e~~~~~~~~~~~~------------~~nla~~~~ 459 (572)
++..++-+.++...+.+.++++|++|++... -|+.++...... ....+-.+.+.+ ..++..++.
T Consensus 29 ~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~---sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~ 105 (336)
T 3lpz_A 29 EEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGG---SGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLR 105 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcc---hHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 3446677788999999999999999999744 444444331100 000000000000 112222222
Q ss_pred hcCC--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 008251 460 KLKD--------YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDI 505 (572)
Q Consensus 460 k~~~--------~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~ 505 (572)
.... -++|+.+..+.=...-.++..+...|..|.+-++|.+|...|
T Consensus 106 ~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 106 LFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 2221 234555554422222357888899999999999999999887
No 343
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=64.95 E-value=21 Score=30.49 Aligned_cols=72 Identities=13% Similarity=0.116 Sum_probs=55.8
Q ss_pred HHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 008251 410 FKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRA 489 (572)
Q Consensus 410 ~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g 489 (572)
...++.++|.+.|+.|++. ...+ ..++...|.--.++++..+|.+.+.+|+.+.|.. +-++..|
T Consensus 71 ~ei~D~d~aR~vy~~a~~~---hKkF------------AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~-~~~le~a 134 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARAN---CKKF------------AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP-LEMLEIA 134 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHH---CTTB------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC-HHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHH---hHHH------------HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc-HHHHHHH
Confidence 3448999999999999986 2222 5678889999999999999999999999998864 4455566
Q ss_pred HHHHhcCC
Q 008251 490 QAYIQMAD 497 (572)
Q Consensus 490 ~a~~~l~~ 497 (572)
...++.|.
T Consensus 135 ~~nl~~~~ 142 (161)
T 4h7y_A 135 LRNLNLQK 142 (161)
T ss_dssp HHHHHTTC
T ss_pred HHhhhcCC
Confidence 65555554
No 344
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=63.87 E-value=33 Score=25.90 Aligned_cols=15 Identities=13% Similarity=0.042 Sum_probs=7.8
Q ss_pred HHHHHHHHHHhCCCC
Q 008251 501 AEFDIKKALEIDPDN 515 (572)
Q Consensus 501 A~~~~~~al~l~P~~ 515 (572)
|++.|..+++..|+.
T Consensus 45 aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 45 AIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHCCCH
Confidence 333455555556554
No 345
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=63.74 E-value=36 Score=25.60 Aligned_cols=17 Identities=12% Similarity=0.090 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHhCCCCH
Q 008251 500 LAEFDIKKALEIDPDNR 516 (572)
Q Consensus 500 ~A~~~~~~al~l~P~~~ 516 (572)
+|++.|..+++..|+..
T Consensus 36 ~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 36 KAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHCCCHH
Confidence 34444556666666553
No 346
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=62.53 E-value=21 Score=36.42 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHhhc
Q 008251 416 ARASKRYEKAVKYIEY 431 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~ 431 (572)
+.|+++|++|++++..
T Consensus 449 ~kAi~~Y~~Ai~~L~k 464 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQK 464 (526)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3566666666655544
No 347
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=61.34 E-value=46 Score=25.65 Aligned_cols=16 Identities=6% Similarity=-0.079 Sum_probs=8.8
Q ss_pred HHHHHHHHHHhCCCCH
Q 008251 501 AEFDIKKALEIDPDNR 516 (572)
Q Consensus 501 A~~~~~~al~l~P~~~ 516 (572)
|++.|..+++..|+..
T Consensus 41 Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 41 GIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHCCCHH
Confidence 4444566666666543
No 348
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=61.09 E-value=11 Score=38.44 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCC-----h---HHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHH
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG-----D---EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~-----~---e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~ 472 (572)
-+...++.+.+.++|.+|.-++.....++..+.... . -........+..++...+..+.+-+.|+.|+..|+
T Consensus 37 ~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k 116 (436)
T 2yin_A 37 YLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCK 116 (436)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 345678899999999999999866555544332110 0 00011122334456566666667788999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHhcCCH
Q 008251 473 KVLDLDSRNVKALYRRAQAYIQMADL 498 (572)
Q Consensus 473 ~al~~~p~~~ka~~~~g~a~~~l~~~ 498 (572)
.++.....+..-|-.++.+|.++.++
T Consensus 117 ~L~~~yE~~~~Dy~~Ls~~~~~~a~~ 142 (436)
T 2yin_A 117 ELAEQYEMEIFDYELLSQNLIQQAKF 142 (436)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98865554444455666666665443
No 349
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=59.16 E-value=91 Score=27.19 Aligned_cols=53 Identities=13% Similarity=0.076 Sum_probs=45.0
Q ss_pred hhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008251 452 LNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (572)
Q Consensus 452 ~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al 509 (572)
+-++...+-.|+|.+|+-.+. .-+...+.|..+.||.++++|..|+..++..+
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777788899999887652 34568899999999999999999999999999
No 350
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=57.97 E-value=15 Score=27.12 Aligned_cols=39 Identities=15% Similarity=0.213 Sum_probs=31.8
Q ss_pred HHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 393 ~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
+++.+.=......|..+...|++++|+.+|.+|+..++.
T Consensus 11 e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 11 EAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 344444556678999999999999999999999998764
No 351
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=57.48 E-value=20 Score=32.26 Aligned_cols=39 Identities=18% Similarity=0.163 Sum_probs=30.6
Q ss_pred HHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHH
Q 008251 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKA 484 (572)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka 484 (572)
..+.-++.+|..++-.++|.+|..++..|+...|.....
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~ 50 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQK 50 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHH
Confidence 456667788888888888888888888888887766443
No 352
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=56.93 E-value=56 Score=24.95 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=49.4
Q ss_pred HHHHHhhhHHHHHHHHHc---CcHHHHHHHHHHHHHHhhcc----CCCChHHHHHHHHHHHHhHhhHHHHHHhc
Q 008251 395 KIEAAGKKKEQGNTLFKA---GKYARASKRYEKAVKYIEYD----TSFGDEEKKQAKALKVACNLNNAACKLKL 461 (572)
Q Consensus 395 ~~~~a~~~k~~G~~~~~~---g~~~~A~~~y~~al~~~~~~----~~~~~e~~~~~~~~~~~~~~nla~~~~k~ 461 (572)
-.+.|-.+.++|-..=.. |+-+.|+..|++++.-+..- .....+.|+.++.+..+...||..+.-++
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777777777 88899999999988765432 12256889999999888888888776544
No 353
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=56.52 E-value=1.1e+02 Score=34.86 Aligned_cols=104 Identities=6% Similarity=-0.118 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcC-C
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-S 479 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-p 479 (572)
.+...=+.+.+.|+.++|...|....+........ -+..|+-+-..|.+.|++++|+..+++..+.. .
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-----------dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~ 197 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-----------TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLT 197 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-----------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-----------CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC
Confidence 45666778999999999999997654332111111 13457888888999999999999999886642 3
Q ss_pred CCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHh--CCCC
Q 008251 480 RNVKALYRRAQAYIQMAD-LDLAEFDIKKALEI--DPDN 515 (572)
Q Consensus 480 ~~~ka~~~~g~a~~~l~~-~~~A~~~~~~al~l--~P~~ 515 (572)
-|.-.|.-+-.++.+.|+ .++|.+.|++..+. .|+.
T Consensus 198 PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~ 236 (1134)
T 3spa_A 198 PDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQA 236 (1134)
T ss_dssp CCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHH
T ss_pred CcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCCh
Confidence 477888888889999998 47888999888764 4544
No 354
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=55.85 E-value=16 Score=39.13 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=47.0
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 454 NAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 454 la~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
++...++.++|..|..++.+.-.......++.|.+|+++.++|+.++|...|+++..
T Consensus 291 ~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 291 RVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 333456779999999999876654446789999999999999999999999998875
No 355
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=54.71 E-value=1.5e+02 Score=28.42 Aligned_cols=100 Identities=11% Similarity=0.027 Sum_probs=58.9
Q ss_pred HHHHhhhHHHHHHHHHcCcHHHHHHHHHH-HHHHhhccC--------------------CCChHHHHHHHHHHHHhHhhH
Q 008251 396 IEAAGKKKEQGNTLFKAGKYARASKRYEK-AVKYIEYDT--------------------SFGDEEKKQAKALKVACNLNN 454 (572)
Q Consensus 396 ~~~a~~~k~~G~~~~~~g~~~~A~~~y~~-al~~~~~~~--------------------~~~~e~~~~~~~~~~~~~~nl 454 (572)
.++-+.++...+.+.++++|++|++.... |+.++.... ..+++... ++
T Consensus 30 YEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~-----------rl 98 (312)
T 2wpv_A 30 YEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVA-----------RL 98 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHH-----------HH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHH-----------HH
Confidence 34456678888999999999999998544 444443211 11111111 12
Q ss_pred HHHHHhcC--------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 008251 455 AACKLKLK--------DYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIK 506 (572)
Q Consensus 455 a~~~~k~~--------~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~ 506 (572)
..++.... =..+|+.+..+.=...-.++..+...|..|.+-+++.+|..+|-
T Consensus 99 ~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 99 VRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 22221111 12334444443322223578889999999999999999999874
No 356
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=53.90 E-value=26 Score=27.24 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=34.3
Q ss_pred ChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 391 ~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
+.+++...=......|..+..+|+++.|+.+|.+|+..++.
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 44555566677789999999999999999999999998764
No 357
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=51.88 E-value=39 Score=24.82 Aligned_cols=36 Identities=6% Similarity=0.087 Sum_probs=26.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008251 487 RRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEY 522 (572)
Q Consensus 487 ~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 522 (572)
.+|..+...|++++|..+|-+|+.+-|+-.+....+
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 577778888888888888888888887765444443
No 358
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=49.71 E-value=79 Score=23.66 Aligned_cols=10 Identities=20% Similarity=0.351 Sum_probs=4.8
Q ss_pred HHHHHHhCCC
Q 008251 505 IKKALEIDPD 514 (572)
Q Consensus 505 ~~~al~l~P~ 514 (572)
|..+++..|+
T Consensus 43 l~~a~k~e~~ 52 (85)
T 2v6x_A 43 LMLALKYEKN 52 (85)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHhCCC
Confidence 4444444544
No 359
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.21 E-value=24 Score=28.43 Aligned_cols=44 Identities=18% Similarity=0.120 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008251 463 DYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (572)
Q Consensus 463 ~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~ 514 (572)
.|..|..+.+++|.+|.. +.-..++.-|.+.+..|.+++.+..+
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 468888888888888762 33344444556666777777777653
No 360
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=48.43 E-value=1.1e+02 Score=24.74 Aligned_cols=21 Identities=10% Similarity=0.023 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhCCCCHHHHH
Q 008251 500 LAEFDIKKALEIDPDNRDVKL 520 (572)
Q Consensus 500 ~A~~~~~~al~l~P~~~~~~~ 520 (572)
+|++.|..+++..+.+...+.
T Consensus 43 ~Aie~l~~alk~e~~~~~~k~ 63 (117)
T 2cpt_A 43 HAVQYFLHVVKYEAQGDKAKQ 63 (117)
T ss_dssp HHHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHH
Confidence 344456667777766654443
No 361
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=47.06 E-value=78 Score=27.18 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhH-hhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACN-LNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~-~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
.-...|..+|..|+|-+|-+.++.+=...+. . .++.. -++..+. +..|..+++.+++..|...+.+++.
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~---~-~~er~---~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGR---G-NTESK---FLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCS---S-SHHHH---HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCC---C-chHHH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3467889999999999999998876442221 1 11222 2333345 5677778888999999999999876
No 362
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=46.88 E-value=59 Score=36.82 Aligned_cols=74 Identities=12% Similarity=0.022 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCCh--HHHHHH------HHHHHHhHhhHHHHHHhcCCHHHHHHHHHHH
Q 008251 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQA------KALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (572)
Q Consensus 403 k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--e~~~~~------~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (572)
.-+|..++..|++++|..+|++|..-+........ +....+ .......|+..+..+-+.+.|+.+++.++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 56899999999999999999988754322221111 000000 0112224445555555556666666666666
Q ss_pred Hh
Q 008251 475 LD 476 (572)
Q Consensus 475 l~ 476 (572)
|+
T Consensus 924 I~ 925 (950)
T 4gq2_M 924 DA 925 (950)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.55 E-value=27 Score=39.63 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=39.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008251 455 AACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (572)
Q Consensus 455 a~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al 509 (572)
+..++..+.++-| ...+...|.++-.-|-+|++|+.+|++++|..+|++|-
T Consensus 817 ~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 817 VEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 3334445555543 34567788898888999999999999999999999876
No 364
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=44.49 E-value=26 Score=37.84 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=43.1
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADL 498 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~ 498 (572)
..+..|...+..|+|..|.+.++.++..+|+|..|..-++.+|.+++.-
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 3557888888999999999999999999999999999999999998743
No 365
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=43.95 E-value=1.8e+02 Score=33.11 Aligned_cols=75 Identities=9% Similarity=-0.002 Sum_probs=58.6
Q ss_pred HhHhhHHHHHHhcCCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHH
Q 008251 449 ACNLNNAACKLKLKDYKQAEKLCTKVLD----LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI--DPDNRDVKLEY 522 (572)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~----~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l--~P~~~~~~~~l 522 (572)
..|+-+-.+|.+.|+.++|...+...-+ -..-|+-.|.-+-.+|.+.|++++|.+.|++..+. .|+-......+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI 207 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAAL 207 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 3467788889999999999999966433 23458889999999999999999999999988764 57654444444
Q ss_pred H
Q 008251 523 K 523 (572)
Q Consensus 523 ~ 523 (572)
.
T Consensus 208 ~ 208 (1134)
T 3spa_A 208 Q 208 (1134)
T ss_dssp H
T ss_pred H
Confidence 4
No 366
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=43.49 E-value=60 Score=30.31 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHHHHHh
Q 008251 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (572)
+.|...|+.|.++. .....+ +.++.-+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pt-------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPT-------HPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46888999999987 432222 25667778888888887 7889999988888764
No 367
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=43.38 E-value=56 Score=30.06 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHHHHHh
Q 008251 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (572)
+.|...|+.|.++....-..+ +.++..+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pt-------hPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPT-------HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 568889999998765322221 25666777888888876 6889999888887664
No 368
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=42.70 E-value=56 Score=35.23 Aligned_cols=51 Identities=16% Similarity=0.145 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEY 532 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~~~~ 532 (572)
..+...+|+..+..|+|.-|.+.+..++..+|+|.+++.+++.+...+..+
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 466788999999999999999999999999999999999988876666543
No 369
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=42.46 E-value=51 Score=29.53 Aligned_cols=34 Identities=21% Similarity=0.073 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~P~~ 515 (572)
+..+|.+|+.++..++|.+|.++|..|++.-|.+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 4566777777777777777777777777776654
No 370
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=40.90 E-value=64 Score=29.89 Aligned_cols=54 Identities=17% Similarity=0.185 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHHHHHh
Q 008251 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (572)
+.|...|+.|.++.......+ +.++.-+.+|.+..|+. +++.++|+..+++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pt-------hPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPT-------HPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 568889999988765322221 25667777888888776 6888888888777653
No 371
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=40.65 E-value=65 Score=30.07 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHHHHHh
Q 008251 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (572)
+.|...|+.|.++.......+ ..++.-+.+|.+..|+. +++.++|+..+++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pT-------hPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPT-------HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567889999988754322221 25667777888888776 6888888888777654
No 372
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.32 E-value=1.5e+02 Score=30.68 Aligned_cols=105 Identities=13% Similarity=0.006 Sum_probs=64.7
Q ss_pred HHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 397 ~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..+.-+.-.|..+.-+++|.+|.+++..|++..|....... .+..++-.+-.|.+-+|+... +.+-
T Consensus 268 q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~g--------fr~~a~K~lI~V~LLlG~iP~------r~lf 333 (523)
T 4b4t_S 268 LEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLG--------FLQQSNKLHCCIQLLMGDIPE------LSFF 333 (523)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSH--------HHHHHHHHHHHHHHHHTCCCC------HHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhh--------HHHHHHHHHHhHHhhcCCCCC------hHHh
Confidence 35777888999999999999999999999998876554321 222223334444444555332 1111
Q ss_pred cCCCC---HHHHHHHHHHHHhcCC---HHHHHHHHHHHHHhCCCCH
Q 008251 477 LDSRN---VKALYRRAQAYIQMAD---LDLAEFDIKKALEIDPDNR 516 (572)
Q Consensus 477 ~~p~~---~ka~~~~g~a~~~l~~---~~~A~~~~~~al~l~P~~~ 516 (572)
..+.. ...|+.++.|+. .|+ |..+++.++..+..+...-
T Consensus 334 ~q~~l~~~L~pY~~Lv~Avr-~GdL~~F~~~L~~h~~~F~~Dgty~ 378 (523)
T 4b4t_S 334 HQSNMQKSLLPYYHLTKAVK-LGDLKKFTSTITKYKQLLLKDDTYQ 378 (523)
T ss_dssp TTTSCHHHHHHHHHHHHHHH-HTCHHHHHHHHHHTHHHHHHTTCTH
T ss_pred hchhHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHhcceeccCChhH
Confidence 12222 344777777763 454 5666777777777775543
No 373
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=40.00 E-value=1.2e+02 Score=23.01 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008251 482 VKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (572)
Q Consensus 482 ~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~ 512 (572)
+..+.-.|.-+++.++|.+|...|+++..+.
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 3444556666777888888888888877654
No 374
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=39.77 E-value=67 Score=30.03 Aligned_cols=53 Identities=13% Similarity=0.163 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHHHHH
Q 008251 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVL 475 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al 475 (572)
+.|...|+.|.++.......+ +.++.-+.+|.+..|+. +++.++|+..+.+|+
T Consensus 152 e~a~~aY~~A~~iA~~~L~pt-------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPT-------HPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCC-------CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 468889999998765322221 25667778888888877 688999988888765
No 375
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=38.22 E-value=1.4e+02 Score=25.52 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=45.4
Q ss_pred hHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHH-HHHHH--HhcCCHHHHHHHHHHHHHh
Q 008251 453 NNAACKLKLKDYKQAEKLCTKVLDLDSRN------VKALYR-RAQAY--IQMADLDLAEFDIKKALEI 511 (572)
Q Consensus 453 nla~~~~k~~~~~~Ai~~~~~al~~~p~~------~ka~~~-~g~a~--~~l~~~~~A~~~~~~al~l 511 (572)
..+..++..++|-+|=+.++.+....+.. .+++.. +|.++ .+.|+..-|...+.+|+..
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45666777799999999999998876554 455556 55554 4569999999999999873
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=37.88 E-value=29 Score=40.30 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=39.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008251 454 NAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (572)
Q Consensus 454 la~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~~~~~~al 509 (572)
+..+.++.+.++.|.. .+...|.++-.-|-+|++|+..|++++|..+|++|.
T Consensus 818 l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 4444555566655433 345678888888999999999999999999998874
No 377
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=35.83 E-value=2.1e+02 Score=25.70 Aligned_cols=71 Identities=10% Similarity=0.151 Sum_probs=49.2
Q ss_pred HHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHhCCCC
Q 008251 444 KALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA--DLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 444 ~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~--~~~~A~~~~~~al~l~P~~ 515 (572)
+.-+...+..+..+.+. .+-..|+.+|..||+.+|.++.-.+..-+.|.+.- +-.-.+..|+.+...+|..
T Consensus 89 rqqL~etH~~RV~a~Ln-~rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe~ 161 (219)
T 3pmr_A 89 RQRLVETHATRVIALIN-DQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEK 161 (219)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHH
Confidence 33444555555555543 34588999999999999988766666555555543 3445788899999888875
No 378
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=35.15 E-value=8 Score=36.18 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhcc
Q 008251 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD 432 (572)
Q Consensus 394 e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~~ 432 (572)
.....|..+..+|..+=+.|+|.+|+.+|..|++++-..
T Consensus 18 p~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp ---------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 345667888899999999999999999999999987543
No 379
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=34.96 E-value=88 Score=28.75 Aligned_cols=55 Identities=15% Similarity=0.214 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHHHHHh
Q 008251 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (572)
Q Consensus 415 ~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (572)
-+.|...|+.|.++.......+ +.++.-+.+|.+..|+. +++.++|+..+++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pt-------hPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPT-------NPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3578899999998765332221 25667778888888775 5889999888887664
No 380
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=32.93 E-value=90 Score=28.45 Aligned_cols=71 Identities=14% Similarity=-0.007 Sum_probs=46.4
Q ss_pred HhhhHHHHHHH-----HHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHH
Q 008251 399 AGKKKEQGNTL-----FKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCT 472 (572)
Q Consensus 399 a~~~k~~G~~~-----~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~ 472 (572)
+--+|.+|..+ |..|+-+.|...|+.|.++....... .+.++.-+.+|.+..|+. +++.++|+..+.
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEIln~p~~Ac~lAk 192 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDK-------IEQLPLGFIQNLAYILSEKYGEKKQVFNMLN 192 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGG-------GGGSCHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCC-------CChHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 33455555443 24556678999999999875432111 013345567788877775 688999999998
Q ss_pred HHHh
Q 008251 473 KVLD 476 (572)
Q Consensus 473 ~al~ 476 (572)
+|+.
T Consensus 193 ~Afd 196 (227)
T 2o8p_A 193 SLGK 196 (227)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8866
No 381
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=31.83 E-value=1.7e+02 Score=22.46 Aligned_cols=63 Identities=21% Similarity=0.132 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 403 k~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
...|..+|..|+|-+|-+.++.+=.-.+ .++..- ++..+.+..|..+.+.+++ |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~------~~~~~~---~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKAT------GEERRL---LQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC------HHHHHH---HHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCC------CchHHH---HHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 4578899999999999999887654321 222222 2333344556666666776 7777777765
No 382
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=30.98 E-value=60 Score=25.14 Aligned_cols=35 Identities=6% Similarity=0.090 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008251 487 RRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLE 521 (572)
Q Consensus 487 ~~g~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~ 521 (572)
.+|..++..|+++.|+.+|-+|+.+-|+-.+....
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i 59 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQV 59 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 46777777777777777777777777665443333
No 383
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=30.82 E-value=35 Score=25.41 Aligned_cols=26 Identities=31% Similarity=0.253 Sum_probs=19.1
Q ss_pred HhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 451 NLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
...+|.-|..+|+|+.|+.+|+.+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 34677777778888888888777765
No 384
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=30.41 E-value=1.4e+02 Score=22.93 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008251 497 DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (572)
Q Consensus 497 ~~~~A~~~~~~al~l~P~~~~~~~~l~~l~~~~ 529 (572)
....++.....+++.+|+|+.+...+.......
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe~Qa~lsey 63 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALANYQMIMSEY 63 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 345566666667778999987777766554443
No 385
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=30.30 E-value=1.1e+02 Score=23.19 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=32.8
Q ss_pred hHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhh
Q 008251 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (572)
Q Consensus 392 ~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (572)
.++.++.|..+.+.|..++++|++..|+.++.=|--++.
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLD 66 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWLE 66 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 467788999999999999999999999998876655443
No 386
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=30.01 E-value=84 Score=29.40 Aligned_cols=55 Identities=22% Similarity=0.170 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhhccC--CCChHHHHHHHHHHHHhHhhHHHHHHh-cCCHHHHHHHHHHHHhc
Q 008251 416 ARASKRYEKAVKYIEYDT--SFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLDL 477 (572)
Q Consensus 416 ~~A~~~y~~al~~~~~~~--~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~~ 477 (572)
+.|...|+.|.++..... .. ...++.-+.+|.+..|+. +++.++|+..+++|+.-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~p-------ThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYP-------SDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGG-------GCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC-------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 567888998887654322 11 125666777888888775 68888888888887653
No 387
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=28.89 E-value=1.2e+02 Score=23.07 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=31.6
Q ss_pred hHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHh
Q 008251 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYI 429 (572)
Q Consensus 392 ~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~ 429 (572)
.++-++.|..+.+.|..++++|++..|+.++.=|--++
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 69 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLL 69 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999998877655443
No 388
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=26.72 E-value=3.4e+02 Score=24.20 Aligned_cols=71 Identities=11% Similarity=0.170 Sum_probs=48.6
Q ss_pred HHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHhCCCC
Q 008251 444 KALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA--DLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 444 ~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~--~~~~A~~~~~~al~l~P~~ 515 (572)
+.-+...+..+..+.+. .+-..|+.+|..||..+|.++.-.+..-+.|.+.- +-.-.+..|+.+...+|..
T Consensus 82 rqqL~etH~qRV~a~ln-~rrr~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~ 154 (211)
T 3umh_A 82 RQQLVETHMARVEAMLN-DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKK 154 (211)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHH
Confidence 33444455555555543 34688999999999999998766655555555432 3445788899999989876
No 389
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=26.55 E-value=2e+02 Score=21.50 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008251 497 DLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (572)
Q Consensus 497 ~~~~A~~~~~~al~l~P~~~~~~~~l~~l 525 (572)
+..+++..-.++|+.+|+|+.+...+...
T Consensus 25 ~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~k 53 (85)
T 2ca5_A 25 TLQGELTLALDKLAKNPSNPQLLAEYQSK 53 (85)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 34556666666777888887766665544
No 390
>3k66_A Beta-amyloid-like protein; X-RAY amyloid precursor protein, heparin binding, alternative splicing, developmental protein, differentiation; 2.70A {Caenorhabditis elegans} PDB: 3k6b_A*
Probab=26.10 E-value=3.7e+02 Score=24.41 Aligned_cols=72 Identities=15% Similarity=0.175 Sum_probs=46.8
Q ss_pred HHHHHHHhHhhHHHHHHhcCCHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHhCCCC
Q 008251 443 AKALKVACNLNNAACKLKLKDYKQAEKLCTKVL--DLDSRNVKALYRRAQAYIQM--ADLDLAEFDIKKALEIDPDN 515 (572)
Q Consensus 443 ~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al--~~~p~~~ka~~~~g~a~~~l--~~~~~A~~~~~~al~l~P~~ 515 (572)
.+.-+...+..+..+.+. .+-..|+.+|..|| ..+|.++.-.+..-+.|.+. .+-.-.+..|+.+...+|..
T Consensus 83 ErqqL~etH~qRV~a~LN-errr~Ale~y~~AL~~q~~pP~~~~Vl~aLk~yiRae~KDR~Htl~hy~Hl~~~dpe~ 158 (239)
T 3k66_A 83 MRKEIEAVHEERVQAMLN-EKKRDATHDYRQALATHVNKPNKHSVLQSLKAYIRAEEKDRMHTLNRYRHLLKADSKE 158 (239)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHH
Confidence 334445556556555543 34588999999999 56677765555444444443 24445788899999998875
No 391
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=25.40 E-value=1.3e+02 Score=30.65 Aligned_cols=47 Identities=17% Similarity=0.029 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 464 YKQAEKLCTKVLDLDSR--------NVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 464 ~~~Ai~~~~~al~~~p~--------~~ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
|+..+.+++.|+.+-|. ..-|+--+|++|+.+++|++|.+..++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 56777888888776543 245777899999999999999999998875
No 392
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=25.37 E-value=1.2e+02 Score=20.69 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=33.8
Q ss_pred ChHHHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhh
Q 008251 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (572)
Q Consensus 391 ~~~e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (572)
+..+.+..|+++-..+.....=.+...|++..++||+++.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 4456778888888888888888999999999999998764
No 393
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=24.74 E-value=55 Score=33.21 Aligned_cols=101 Identities=12% Similarity=0.100 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHcCcHHHHHHHHHHHHHH----------hhccCC----CCh---HH--HHH---------HHHHHHHhHh
Q 008251 401 KKKEQGNTLFKAGKYARASKRYEKAVKY----------IEYDTS----FGD---EE--KKQ---------AKALKVACNL 452 (572)
Q Consensus 401 ~~k~~G~~~~~~g~~~~A~~~y~~al~~----------~~~~~~----~~~---e~--~~~---------~~~~~~~~~~ 452 (572)
-+...++.+.+.++|.+|.-++-.+..+ ++.+.. ... ++ ... -...+..++.
T Consensus 13 wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll~ 92 (428)
T 2wm9_A 13 WLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLE 92 (428)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHHHH
Confidence 3567788899999999999998744432 111100 000 00 000 0111223444
Q ss_pred hHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHHH
Q 008251 453 NNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAE 502 (572)
Q Consensus 453 nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A~ 502 (572)
..+.++.+-+.|+.|+..|+.++.....+ .-|-.++.+|..+.++-+.+
T Consensus 93 ~ai~~f~kg~~~E~ai~~~k~L~~~ye~~-~dy~~Ls~~~~~~a~~y~~I 141 (428)
T 2wm9_A 93 QCADGLWKAERYELIADIYKLIIPIYEKR-RDFERLAHLYDTLHRAYSKV 141 (428)
T ss_dssp HHHHHHHHTTCGGGHHHHHTTTHHHHHHT-TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHH
Confidence 45556666678999999999887654433 45567777777775544433
No 394
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=24.47 E-value=83 Score=34.92 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=47.0
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEEec----C----------------------CCCCcccEEEEcCCcchhhHHHHHHhc
Q 008251 284 ERPNEGAVVKVKLIGKLQDGTVFVKK----G----------------------HSEEEQLFEFKTDEEQVIDGLDRAVIT 337 (572)
Q Consensus 284 ~~p~~~~~v~v~~~~~l~~g~~~~~~----~----------------------~~~~~~~~~~~lg~~~vi~gle~~l~~ 337 (572)
.....|+.|.|.|+..|...-...+. + .-+.+..++|.+|.+.+.+-++.++..
T Consensus 559 ~~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~q 638 (950)
T 3htx_A 559 QSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQ 638 (950)
T ss_dssp -CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTT
T ss_pred eccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeee
Confidence 34578999999999877421001000 0 002345688999999999999999999
Q ss_pred cCCCcEEEEEEc
Q 008251 338 MKKNEVALLTIA 349 (572)
Q Consensus 338 M~~GE~~~v~i~ 349 (572)
|..|+...|...
T Consensus 639 ms~gqT~~F~~~ 650 (950)
T 3htx_A 639 MTVGEYASFKMT 650 (950)
T ss_dssp CCTTCEEEEEES
T ss_pred ccccceeEEecc
Confidence 999999999854
No 395
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=23.41 E-value=95 Score=31.56 Aligned_cols=29 Identities=21% Similarity=0.135 Sum_probs=24.7
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..++..+|.+|+-.++|++|+..|++++.
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 44566788899999999999999999874
No 396
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.88 E-value=1.5e+02 Score=30.14 Aligned_cols=49 Identities=14% Similarity=0.092 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008251 464 YKQAEKLCTKVLDLDSR--------NVKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (572)
Q Consensus 464 ~~~Ai~~~~~al~~~p~--------~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l~ 512 (572)
|+..+.+++.|+.+-|. ..-|+--+|++|+.+++|++|.+..++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 67788888888876553 23577789999999999999999999998643
No 397
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=22.71 E-value=1.5e+02 Score=30.56 Aligned_cols=48 Identities=21% Similarity=0.104 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhcCCC-----------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008251 464 YKQAEKLCTKVLDLDSR-----------NVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (572)
Q Consensus 464 ~~~Ai~~~~~al~~~p~-----------~~ka~~~~g~a~~~l~~~~~A~~~~~~al~l 511 (572)
|+..+.+++.|+..-|. ..-|+--+|++|+.+++|++|....++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 56677777777765442 2357778999999999999999999999864
No 398
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=22.58 E-value=1.4e+02 Score=30.31 Aligned_cols=47 Identities=15% Similarity=0.103 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008251 464 YKQAEKLCTKVLDLDSR--------NVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (572)
Q Consensus 464 ~~~Ai~~~~~al~~~p~--------~~ka~~~~g~a~~~l~~~~~A~~~~~~al~ 510 (572)
|+..+.+++.|+.+-|. ..-|+--+|++|+.+++|++|....++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 46677788888775443 245777899999999999999999998875
No 399
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=27.56 E-value=19 Score=38.99 Aligned_cols=52 Identities=21% Similarity=0.155 Sum_probs=46.1
Q ss_pred hHhhHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCHHHH
Q 008251 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLA 501 (572)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~g~a~~~l~~~~~A 501 (572)
..+..|...+..|+|..|.+.++.++..+|+|..|..-++.+|.+++--.+.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 3557888888999999999999999999999999999999999999865544
No 400
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=21.20 E-value=1.1e+02 Score=31.28 Aligned_cols=29 Identities=14% Similarity=0.094 Sum_probs=24.2
Q ss_pred HHhHhhHHHHHHhcCCHHHHHHHHHHHHh
Q 008251 448 VACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (572)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (572)
..++.-+|.+|+-.++|++|+..|++++.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 44566788888889999999999999875
No 401
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=21.17 E-value=20 Score=36.63 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=0.0
Q ss_pred HHHHHHhhhHHHHHHHHHcCcHHHHHHHHHHHHHHhhc
Q 008251 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (572)
Q Consensus 394 e~~~~a~~~k~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (572)
+.+..|..+..+|..+-+.|+|++|+.+|..|++++-.
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34567788889999999999999999999999998654
Done!