Query 008252
Match_columns 572
No_of_seqs 294 out of 2311
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 21:47:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008252.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008252hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pm9_A Putative oxidoreductase 100.0 8.3E-77 2.8E-81 645.5 46.3 455 107-566 9-476 (476)
2 4bby_A Alkyldihydroxyacetoneph 100.0 1.7E-68 5.7E-73 602.7 48.7 454 107-566 156-658 (658)
3 2uuu_A Alkyldihydroxyacetoneph 100.0 6.8E-69 2.3E-73 595.9 34.4 452 108-566 87-584 (584)
4 1e8g_A Vanillyl-alcohol oxidas 100.0 7.4E-64 2.5E-68 555.4 39.9 440 114-567 23-548 (560)
5 1wvf_A 4-cresol dehydrogenase 100.0 1.2E-61 4.2E-66 533.9 44.5 443 113-568 18-515 (520)
6 1f0x_A DLDH, D-lactate dehydro 100.0 5.1E-62 1.7E-66 537.5 29.2 433 112-569 9-563 (571)
7 2exr_A Cytokinin dehydrogenase 100.0 4.3E-56 1.5E-60 489.2 20.8 418 111-568 26-522 (524)
8 1w1o_A Cytokinin dehydrogenase 100.0 7.9E-54 2.7E-58 473.2 30.6 434 114-567 33-534 (534)
9 2vfr_A Xylitol oxidase, aldito 100.0 3.3E-40 1.1E-44 354.5 11.9 374 148-562 18-413 (422)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 6.1E-37 2.1E-41 332.4 35.6 394 146-568 34-456 (459)
11 3tsh_A Pollen allergen PHL P 4 100.0 3.5E-37 1.2E-41 337.7 32.3 228 112-347 8-248 (500)
12 3rja_A Carbohydrate oxidase; p 100.0 3.5E-35 1.2E-39 318.9 35.2 216 126-347 13-232 (473)
13 2ipi_A Aclacinomycin oxidoredu 100.0 8.1E-35 2.8E-39 319.8 35.9 189 146-335 51-255 (521)
14 4feh_A Oxidoreductase DPRE1; a 100.0 1.1E-35 3.7E-40 322.9 28.5 397 144-561 36-471 (481)
15 1zr6_A Glucooligosaccharide ox 100.0 3.1E-35 1E-39 322.0 29.9 221 117-345 7-233 (503)
16 3fw9_A Reticuline oxidase; BI- 100.0 2.3E-35 8E-40 321.1 27.6 194 148-348 43-241 (495)
17 3pop_A GILR oxidase; FAD bindi 100.0 5.4E-35 1.9E-39 318.9 28.6 212 121-336 6-234 (501)
18 2wdx_A Putative hexose oxidase 100.0 2.5E-34 8.6E-39 315.9 33.8 189 147-336 54-258 (523)
19 2y3s_A TAML; oxidoreductase; H 100.0 8.3E-35 2.8E-39 320.0 29.1 189 146-335 54-259 (530)
20 3vte_A Tetrahydrocannabinolic 100.0 7.2E-35 2.5E-39 318.1 27.8 195 148-349 51-250 (518)
21 2i0k_A Oxidoreductase; MIX alp 100.0 7.2E-30 2.5E-34 282.7 33.9 188 146-343 31-239 (561)
22 3js8_A Cholesterol oxidase; ch 100.0 1.6E-29 5.3E-34 275.0 32.4 186 147-343 26-235 (540)
23 1hsk_A UDP-N-acetylenolpyruvoy 100.0 4.2E-33 1.4E-37 288.6 2.8 281 109-411 12-303 (326)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 2.1E-27 7.3E-32 244.5 12.3 195 111-326 20-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 2.9E-25 9.8E-30 230.9 16.2 173 143-327 23-200 (357)
26 1uxy_A MURB, uridine diphospho 99.9 7E-25 2.4E-29 227.4 18.3 173 143-326 7-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 2.9E-23 9.8E-28 208.1 11.1 156 144-325 16-173 (268)
28 2yvs_A Glycolate oxidase subun 99.9 7.7E-22 2.6E-26 192.2 11.0 126 209-338 2-128 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 8.4E-07 2.9E-11 89.7 7.2 151 151-324 5-177 (287)
30 2w3s_A Xanthine dehydrogenase; 97.6 1.9E-05 6.6E-10 84.7 3.5 153 149-323 175-345 (462)
31 1n62_C Carbon monoxide dehydro 97.3 0.00022 7.5E-09 71.9 5.9 151 151-323 5-176 (288)
32 3nvz_B Xanthine dehydrogenase/ 97.2 0.0007 2.4E-08 68.7 8.7 126 148-283 7-157 (305)
33 1t3q_C Quinoline 2-oxidoreduct 95.7 0.0066 2.3E-07 61.0 4.4 120 151-283 5-143 (288)
34 3hrd_C Nicotinate dehydrogenas 92.5 0.22 7.4E-06 50.0 7.3 103 151-256 3-118 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 88.5 0.76 2.6E-05 46.6 7.0 99 151-255 6-118 (324)
36 3unc_A Xanthine dehydrogenase/ 76.0 3.6 0.00012 49.6 7.0 105 149-257 231-356 (1332)
37 3zyv_A AOH1; oxidoreductase, m 66.7 2.3 7.9E-05 51.3 2.5 80 151-234 240-321 (1335)
38 2ns6_A Mobilization protein A; 27.5 3.5E+02 0.012 24.5 9.8 46 447-492 73-124 (185)
39 3lae_A UPF0053 protein HI0107; 25.3 1.4E+02 0.0046 23.0 5.7 39 213-256 7-45 (81)
40 3llb_A Uncharacterized protein 22.9 1.3E+02 0.0043 23.3 5.1 39 213-256 7-45 (83)
41 1yht_A DSPB; beta barrel, hydr 22.8 47 0.0016 33.8 3.2 23 158-180 92-114 (367)
42 1xty_A PTH, peptidyl-tRNA hydr 22.7 1.1E+02 0.0036 25.9 4.9 31 148-178 52-82 (120)
43 2pls_A CBS domain protein; APC 22.0 1.5E+02 0.0052 22.9 5.5 41 213-256 7-49 (86)
44 1wn2_A Peptidyl-tRNA hydrolase 21.9 1.1E+02 0.0039 25.8 4.9 32 148-179 53-84 (121)
45 2r2z_A Hemolysin; APC85144, en 21.1 1.2E+02 0.0042 23.9 4.8 39 213-256 14-52 (93)
46 1rzw_A Protein AF2095(GR4); be 21.0 1.3E+02 0.0043 25.6 5.0 36 148-183 46-82 (123)
47 3p04_A Uncharacterized BCR; SE 20.4 1E+02 0.0034 24.6 4.0 22 152-173 7-28 (87)
No 1
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8.3e-77 Score=645.53 Aligned_cols=455 Identities=27% Similarity=0.377 Sum_probs=397.1
Q ss_pred CCCCCcHHHHHHHHHhcCC-CeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCC
Q 008252 107 SHKEIPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATS 185 (572)
Q Consensus 107 ~~~~~~~~~~~~L~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s 185 (572)
+...++++++++|++++|. ++.++......|.+++.. +.++.|.+||+|+|++||+++|++|+++++|++|+|||||
T Consensus 9 ~~~~~~~~~~~~L~~~lg~~~v~~~~~~~~~~~~d~~~--~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~ 86 (476)
T 3pm9_A 9 SPVTLSPELIARFTAIVGDKHALTDPLELEAYITEERN--LYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTG 86 (476)
T ss_dssp ---CCCHHHHHHHHHHHCGGGEECSHHHHHHHHBCTTC--CCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCC
T ss_pred CcccCCHHHHHHHHHhcCCCcEecCHHHHHHHhccccc--ccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCC
Confidence 4456788999999999985 677776655555544322 3457899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCccCCCCCC--cccccccccccccCCCcc
Q 008252 186 IEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAV 263 (572)
Q Consensus 186 ~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~~--~~tvGG~v~~~~~G~~~~ 263 (572)
+.|++.+.++|++|||++||+|+++|+++.+++||||++|.+|+++|.++|+.+|.+++. ++||||++++|++|..+.
T Consensus 87 ~~g~~~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~ 166 (476)
T 3pm9_A 87 LVGGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAAL 166 (476)
T ss_dssp SSSTTCCCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHH
T ss_pred CCCCccCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCccc
Confidence 999988766799999999999999999999999999999999999999999999987654 799999999999999999
Q ss_pred ccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCCHHHHHH
Q 008252 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAAD 343 (572)
Q Consensus 264 ~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~~~a~~ 343 (572)
+||.++|+|++++||++||++++++....++..||||+++++|++|+|||||++|||++|.|+......+.|++++++.+
T Consensus 167 ~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~ 246 (476)
T 3pm9_A 167 AYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALK 246 (476)
T ss_dssp HHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHH
T ss_pred ccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHH
Confidence 99999999999999999999999877767788999999999999999999999999999999988888999999999999
Q ss_pred HHHHHHH-cCCceeeeeeccHHHHHHHHhhcCCCCC--C--CCceEEEEecChhhHHHHHHHHHHHhhhcCc-ceEEEcC
Q 008252 344 VAIATML-SGIQVSRVELLDEVQVRAVNIANGKNLP--E--LPTLMFEFIGTQAYSHEQTLIVQKIVSEHNG-TDFIFAE 417 (572)
Q Consensus 344 ~~~~~~~-~~~~~~~~e~~d~~~~~~~~~~~~~~~~--~--~~~l~~~~~g~~~~~~~~~~~~~~i~~~~~g-~~~~~~~ 417 (572)
++.++.. .+..|.++|+||...++.++...+...| + .+.|++++.|+++.++++.+.+.+.+.+.+. .+..++.
T Consensus 247 ~~~~~~~~~g~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~llve~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~a~ 326 (476)
T 3pm9_A 247 LLGIAQGEAAGNLTSFELIAETPLDFSVRHANNRDPLEARYPWYVLIELSSPRDDARAALESILERGFEDGIVVDAAIAN 326 (476)
T ss_dssp HHHHHHHHHGGGEEEEEEEEHHHHHHHHHHTTCCCCSSSCCSEEEEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHhcCCCceEEEecCHHHHHHHHhccCCCCCCCccCCeEEEEEEccCcHHHHHHHHHHHHHHHhcCCCcceEEeC
Confidence 9988875 5789999999999998877655433222 2 3478999999887676666666666666554 5788888
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCcceeeeeeeecchhHHHHHHHHHHHhccC--CcEEEEEEEecCCceEEEEeeCCC
Q 008252 418 DPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDAS--PLICTVIAHAGDGNFHTVILFDPS 495 (572)
Q Consensus 418 ~~~~~~~lw~~R~~~~~~~~~~~~~~~~~~~D~~vP~s~l~e~l~~~~~~~~~~--~~~~~~~gH~gdG~~h~~i~~~~~ 495 (572)
++++.+++|++|+....+.....+ .+.+|++||+++++++++.+++.++++ ++...+|||+||||+|++++++..
T Consensus 327 ~~~~~~~lW~~R~~~~~~~~~~g~---~~~~Dv~vP~~~l~~~~~~~~~~~~~~~~~~~~~~~gH~gdGnlH~~i~~~~~ 403 (476)
T 3pm9_A 327 SVQQQQAFWKLREEISPAQKPEGG---SIKHDISVPVAAVPQFIEQANAAVVALIPGARPVPFGHLGDGNIHYNVSQPVG 403 (476)
T ss_dssp SHHHHHHHHHHHHTHHHHTGGGCC---EECCEEECCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTEEEEEEECCTT
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCC---ceeEEEEeeHHHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCCceEEEEecCCc
Confidence 999999999999987765544332 478999999999999999999999998 899999999999999999998652
Q ss_pred -CH-HHHHHHHHHHHHHHHHHHhcCCeEEeccccccccHHHHHHhhCHHHHHHHHHHHHhcCCCCCccCCCcc
Q 008252 496 -KE-EDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLI 566 (572)
Q Consensus 496 -~~-~~~~~~~~~~~~l~~~~~~~gG~~s~ehGiG~~k~~~l~~~~g~~~~~~~~~lK~~~DP~gIlNPGk~~ 566 (572)
++ +..++++++.+.+++.++++||++|+|||+|..|++|+..++|++.+++|++||++|||+|||||||+|
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~gGsis~EHGiG~~k~~~l~~~~~~~~~~~m~~iK~~~DP~~ilNPGki~ 476 (476)
T 3pm9_A 404 ADKAEFLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDELAEVKDKTAIELMRSIKALLDPHGIMNPGKVV 476 (476)
T ss_dssp CCHHHHHTTHHHHHHHHHHHHHHTTCBSCSSSCCTTTTHHHHHHHSCHHHHHHHHHHHHHHCTTSCBSTTSCC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHcCCEEEEcccCchhHHHHHHHhcCHHHHHHHHHHHHHhCcccCCCCCCcC
Confidence 33 346778899999999999999999999999999999999999999999999999999999999999986
No 2
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=1.7e-68 Score=602.70 Aligned_cols=454 Identities=22% Similarity=0.338 Sum_probs=367.2
Q ss_pred CCCCCcHHHHHHHHHhcCCCeeeChhhhhhccCCC--Ccc-----ccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEE
Q 008252 107 SHKEIPQELVDELKAICQDDMTMDYEERYIHGKPQ--NSF-----HKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIP 179 (572)
Q Consensus 107 ~~~~~~~~~~~~L~~~lg~~~~~~~~~~~~~~~~~--~~~-----~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~ 179 (572)
+...++++++++|++++++ ..++.++++.|.+.+ ..+ ..+...|++||+|+|+|||+++|++|+++++||+|
T Consensus 156 p~~~~~~~~~~~l~~~~~~-~~~~~~~r~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvp 234 (658)
T 4bby_A 156 PPSIVNEDFLHELKKTNIS-YSQEADDRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIP 234 (658)
T ss_dssp CCCCCCHHHHHHHHHHTCE-EECCHHHHHHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHhccc-ccCchHHHhhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEE
Confidence 4456788999999998775 556777777764322 111 12346899999999999999999999999999999
Q ss_pred ECCCCCCCCCCCCC----CCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCccCCCCCC--cccccccc
Q 008252 180 YGGATSIEGHTLSP----NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMC 253 (572)
Q Consensus 180 ~GgG~s~~g~~~~~----~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~~--~~tvGG~v 253 (572)
+|||||+.|++.++ .++|+|||++||+|+++|+++.+++||||+++.+|+++|.++|+++|++|.+ .+||||++
T Consensus 235 rGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~i 314 (658)
T 4bby_A 235 IGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWI 314 (658)
T ss_dssp ESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHH
T ss_pred ECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehh
Confidence 99999999887653 3579999999999999999999999999999999999999999999998875 59999999
Q ss_pred cccccCCCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEE
Q 008252 254 ATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATC 333 (572)
Q Consensus 254 ~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~ 333 (572)
++|++|..+.+||.+.|+|+++|||++||++++.+ +..++++||||+++++||+|||||||++||||+|.|+.....++
T Consensus 315 Atna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~-~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~ 393 (658)
T 4bby_A 315 STRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSC-QGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSV 393 (658)
T ss_dssp HHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSC-CCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEE
T ss_pred hcCCCCCCccCcCCHHHheeeEEEEeCCCcccccc-cccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCcccccccc
Confidence 99999999999999999999999999999998754 45678899999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHHHHHcCCceeeeeeccHHHHHHHHhhcCC-----------------------CCCCCCceEEEEecC
Q 008252 334 NFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGK-----------------------NLPELPTLMFEFIGT 390 (572)
Q Consensus 334 ~f~~~~~a~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~~~-----------------------~~~~~~~l~~~~~g~ 390 (572)
.|++++++.+++.+++..++.|.++|++|...++........ .......+.+.+.|+
T Consensus 394 ~f~d~~~a~~av~~i~~~~~~psa~El~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~eg~ 473 (658)
T 4bby_A 394 AFPNFEQGVACLREIAKQRCAPASIRLMDNQQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGD 473 (658)
T ss_dssp EESSHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHHHHTSSCCCCTTCC--------------CCCTTTCEEEEEEEEEC
T ss_pred ccCCchhhhhhHHHHHHcCCCccccccccHHHHHHHHhhcccccccccccccchhhhhhhhhccCChHHHHHHHHHhccc
Confidence 999999999999999999999999999998877654332110 000111345667788
Q ss_pred hhhHHHHHHHHHHHhhhcCcceEEEcCCHHHHHHHHHHHHHH-HHHHHhcCCCcceeeeeeeecchhHHHHHHHHHHHhc
Q 008252 391 QAYSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEA-LWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELD 469 (572)
Q Consensus 391 ~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~lw~~R~~~-~~~~~~~~~~~~~~~~D~~vP~s~l~e~l~~~~~~~~ 469 (572)
.+.+.++...+.+++...++. ....+.....|..|... +...............|+++|++++.++++.+++.+.
T Consensus 474 ~~~v~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~avP~~~l~~~~~~v~~~l~ 549 (658)
T 4bby_A 474 REKVLQHEKQVYDIAAKFGGL----AAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGESFETSAPWDRVVDLCRNVKERIR 549 (658)
T ss_dssp HHHHHHHHHHHHHHHHTTTCE----ECCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcc----hhhhhHHHHHHHHhhHHHHHHhhccccCCccceEEEEeeHHHHHHHHHHHHHHHH
Confidence 777777777777787777663 22233333344333221 1111222233334577999999999999988877664
Q ss_pred c---------CCcEEEEEEEecCCceE--EEEeeCCC-CHHHHHHHHHHHHHHHHHHHhcCCeEEeccccccccHHHHHH
Q 008252 470 A---------SPLICTVIAHAGDGNFH--TVILFDPS-KEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEK 537 (572)
Q Consensus 470 ~---------~~~~~~~~gH~gdG~~h--~~i~~~~~-~~~~~~~~~~~~~~l~~~~~~~gG~~s~ehGiG~~k~~~l~~ 537 (572)
+ .++..+.++|+++++.| +.+.++.. .++..+.++++.+.+.+.++++||++|+|||||..|++|+.+
T Consensus 550 ~~~~~~g~~~~~~~~~~~~h~~dg~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~GGsiS~EHGIG~~k~~~l~~ 629 (658)
T 4bby_A 550 RECKEKGVQFPPLSTCRVTQTYDAGACIYFYFAFNYRGISDPLAVFEQTEAAAREEILANGGSLSHHHGVGKLRKQWLKE 629 (658)
T ss_dssp HHHHHTTCSSCCEEEEEEEEECSSEEEEEEEEEEECTTCSCHHHHHHHHHHHHHHHHHHTTCCSCSSSCCTTTSGGGHHH
T ss_pred HHHHhcCccccccceEEEEEEeccCceEEEEecCCcCCchhHHHHHHHHHHHHHHHHHHcCCeEEEcccchHHHHHHHHH
Confidence 3 24567789999999854 44555433 334556678888999999999999999999999999999999
Q ss_pred hhCHHHHHHHHHHHHhcCCCCCccCCCcc
Q 008252 538 ELGTGALETMKRIKVALDPNNIMNPGKLI 566 (572)
Q Consensus 538 ~~g~~~~~~~~~lK~~~DP~gIlNPGk~~ 566 (572)
++++..+++|++||++|||+|||||||++
T Consensus 630 ~~g~~~l~lmr~IK~a~DP~gILNPGKll 658 (658)
T 4bby_A 630 SISDVGFGMLKSVKDYVDPTNIFGNRNLL 658 (658)
T ss_dssp HHCHHHHHHHHHHHHHHSTTCSSCSCCCC
T ss_pred hcCHHHHHHHHHHHHHhCcccCCCCCCCC
Confidence 99999999999999999999999999986
No 3
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=6.8e-69 Score=595.92 Aligned_cols=452 Identities=24% Similarity=0.351 Sum_probs=351.2
Q ss_pred CCCCcHHHHHHHHHhc-CCCeeeChhhhhhccCCC-----Cccc--cCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEE
Q 008252 108 HKEIPQELVDELKAIC-QDDMTMDYEERYIHGKPQ-----NSFH--KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIP 179 (572)
Q Consensus 108 ~~~~~~~~~~~L~~~l-g~~~~~~~~~~~~~~~~~-----~~~~--~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~ 179 (572)
...++++++++|++++ |+++.++..++..|+++. +++. .....|.+||+|+|++||+++|++|+++++||+|
T Consensus 87 ~~~~~~~~~~~L~~~l~g~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~ 166 (584)
T 2uuu_A 87 PPKQYPEFVRELKAFFLPDQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIP 166 (584)
T ss_dssp CCCCCHHHHHHHHTTSCGGGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcCCHHHHHHHHhhcCCCeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEE
Confidence 3446778999999999 877888887766565432 1111 1235899999999999999999999999999999
Q ss_pred ECCCCCCCCCCCCC---CCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCccCCCCCC--ccccccccc
Q 008252 180 YGGATSIEGHTLSP---NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCA 254 (572)
Q Consensus 180 ~GgG~s~~g~~~~~---~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~~--~~tvGG~v~ 254 (572)
+|||||+.|++.+. +++|+|||++||+|+++|+++.+++||||++|.+|+++|.++|+.++.+|+. .+||||+++
T Consensus 167 ~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia 246 (584)
T 2uuu_A 167 MGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLA 246 (584)
T ss_dssp ESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHH
T ss_pred EeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeecc
Confidence 99999999888764 4689999999999988999999999999999999999999999999988864 599999999
Q ss_pred ccccCCCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEe
Q 008252 255 TRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCN 334 (572)
Q Consensus 255 ~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~ 334 (572)
+|++|..+.+||.++|+|++++||++||++++. ...++..||||+++++|++|+|||||+++||++|.|+......+.
T Consensus 247 ~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~--~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~ 324 (584)
T 2uuu_A 247 TCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELR--NGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFL 324 (584)
T ss_dssp HTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC---------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEE
T ss_pred CCCCcccccCcCcHHHheeeEEEEeCCCCEEEC--CccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEE
Confidence 999999999999999999999999999998642 123556899999999999999999999999999999988888999
Q ss_pred cCCHHHHHHHHHHHHHcCCceeeeeeccHHHHHHHHhhc------------------C--CCCC--CCCceEEEEecChh
Q 008252 335 FPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIAN------------------G--KNLP--ELPTLMFEFIGTQA 392 (572)
Q Consensus 335 f~~~~~a~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~------------------~--~~~~--~~~~l~~~~~g~~~ 392 (572)
|++++++.+++.++...++.++++|++|...+....... . ..++ ....+++++.|+++
T Consensus 325 f~~~~~a~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llve~~g~~~ 404 (584)
T 2uuu_A 325 FPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKK 404 (584)
T ss_dssp ESSHHHHHHHHHHHHHHTCCCSEEEEECHHHHHHHHHTCCSCCCTTCCHHHHHHHHHHHTTTSCTTTCEEEEEEEEECHH
T ss_pred cCCHHHHHHHHHHHHhcCCCceEEEEechhHHHHHhhccCcccccchhhhhhHHHhhhhccCCCCCccEEEEEEEecChH
Confidence 999999999999998899999999999997655321100 0 1232 33468899999988
Q ss_pred hHHHHHHHHHHHhhhcCcceEEEcCCHHHHHHHHHHHHHHHHHHHhc--CCCcceeeeeeeecchhHHHHHHHHHHH---
Q 008252 393 YSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAM--EPSFEAMISDVCVPLSCLAELISRSKKE--- 467 (572)
Q Consensus 393 ~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~lw~~R~~~~~~~~~~--~~~~~~~~~D~~vP~s~l~e~l~~~~~~--- 467 (572)
.++++.+.+.+++.+.++... . ++..++|..|+...+..... ..+......|++||+++++++++.+++.
T Consensus 405 ~v~~~~~~~~~~~~~~g~~~~--~---~~~~~lW~~r~~~~~~l~~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~~~~l~~ 479 (584)
T 2uuu_A 405 VVDFHRTSVFDILSKNAAFGL--G---SAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVK 479 (584)
T ss_dssp HHHHHHHHHHHHHHTTTCEEE--E---EESTTHHHHGGGGHHHHHHHHHTTTEEEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCccc--h---HHHHHHHHHhhhchHHHHhhhcccCCccccceEEeeHHHHHHHHHHHHHHHHh
Confidence 888888888889888877543 2 23457999998766654432 1222235789999999999999998888
Q ss_pred -hccCCcEEE---EEEEecCCc--eEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEeccccccccHHHHHHhhCH
Q 008252 468 -LDASPLICT---VIAHAGDGN--FHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGT 541 (572)
Q Consensus 468 -~~~~~~~~~---~~gH~gdG~--~h~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~gG~~s~ehGiG~~k~~~l~~~~g~ 541 (572)
+.++++... +++|+||++ +|+.+.++..+++..++++++.+.+.+.++++||++|+|||+|..|++|+..++|+
T Consensus 480 ~~~~~g~~~~~~~h~gH~gd~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gGsiS~EHGiG~~k~~~l~~~~g~ 559 (584)
T 2uuu_A 480 HFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATR 559 (584)
T ss_dssp HHHTTTCCEEEEEEEEEEETTEEEEEEEEEEECCTTCCTHHHHHHHHHHHHHHHHTTCCCC------------------C
T ss_pred HHHhcCCeeEEEEEEEeecCCCcEEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCcEEecccCCcccHHHHHHhcCH
Confidence 677777654 455667754 45556665334444456678889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCccCCCcc
Q 008252 542 GALETMKRIKVALDPNNIMNPGKLI 566 (572)
Q Consensus 542 ~~~~~~~~lK~~~DP~gIlNPGk~~ 566 (572)
..+++|++||++|||+|||||||+|
T Consensus 560 ~~~~lmr~iK~a~DP~gIlNPGki~ 584 (584)
T 2uuu_A 560 GWINVYRSLKETIDPKDICNPRKLI 584 (584)
T ss_dssp THHHHHHHHHHHHCTTCCBSCCCC-
T ss_pred HHHHHHHHHHHHcCCCcCCCCCCCC
Confidence 9999999999999999999999986
No 4
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=7.4e-64 Score=555.45 Aligned_cols=440 Identities=20% Similarity=0.272 Sum_probs=360.4
Q ss_pred HHHHHHHHhcCC-CeeeChhhhhh----ccCC-----CCcc-ccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECC
Q 008252 114 ELVDELKAICQD-DMTMDYEERYI----HGKP-----QNSF-HKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGG 182 (572)
Q Consensus 114 ~~~~~L~~~lg~-~~~~~~~~~~~----~~~~-----~~~~-~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~Gg 182 (572)
+++++|++++|+ ++.++..++.. |+.+ .++. ......|.+||+|+|++||+++|++|+++++||+|+|+
T Consensus 23 ~~~~~L~~~~g~~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~ 102 (560)
T 1e8g_A 23 EFIQDIIRIVGSENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISI 102 (560)
T ss_dssp HHHHHHHHHHCGGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHhhCcccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 478999999995 78888877665 4433 1111 12356899999999999999999999999999999999
Q ss_pred CCCCC-CCCCC-CCCcEEEEc-CCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCc--cCCCCCC--cccccccccc
Q 008252 183 ATSIE-GHTLS-PNGGVCIDL-SLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF--FPLDPGP--GATIGGMCAT 255 (572)
Q Consensus 183 G~s~~-g~~~~-~~~gvvIdl-~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~--l~~~~~~--~~tvGG~v~~ 255 (572)
|||+. |+..+ .++|++||| ++||+|+++|+++.+|+||||+++.+|+++|.++|+. +|+++.. .+|+||++++
T Consensus 103 Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~ 182 (560)
T 1e8g_A 103 GRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVE 182 (560)
T ss_dssp CCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHT
T ss_pred CCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccC
Confidence 99987 76665 368999999 9999999899999999999999999999999999999 8766543 5899999999
Q ss_pred cccCCCccccccccceeeeEEEEeeCCcEEEcccccccC-------------------------cCCccchhhhhcCCCC
Q 008252 256 RCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKS-------------------------AAGYDLTRLIIGSEGT 310 (572)
Q Consensus 256 ~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~-------------------------~~g~dl~~~~~Gs~G~ 310 (572)
|++|.. +||.+.|+|++++||++||++++++....++ ..||||..++. +|+
T Consensus 183 ~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~--~Gt 258 (560)
T 1e8g_A 183 RGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFS--QSN 258 (560)
T ss_dssp TCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGS--SSS
T ss_pred CCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccc--cCc
Confidence 988864 9999999999999999999999987644333 35889988875 589
Q ss_pred eEEEEEEEEeeeccccceEEEEEecCCHHHHHHHH---HHHHHcCCceeeeeeccHHHHHHHH-----hhcC--CCCCC-
Q 008252 311 LGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVA---IATMLSGIQVSRVELLDEVQVRAVN-----IANG--KNLPE- 379 (572)
Q Consensus 311 lGIIt~~tlkl~p~p~~~~~~~~~f~~~~~a~~~~---~~~~~~~~~~~~~e~~d~~~~~~~~-----~~~~--~~~~~- 379 (572)
|||||++||||+|.|+......+.|++++++.+++ .+++.+++.+.++|++|... .... .... ..+|+
T Consensus 259 lGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~p~~~el~d~~~-~~~~l~~~~~~~~~~~~~p~~ 337 (560)
T 1e8g_A 259 MGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHILL-DAAVLGDKRSYSSRTEPLSDE 337 (560)
T ss_dssp SEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHHH-HHHHHCCGGGTCCCSSCCCHH
T ss_pred EEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHcCCCcceeEEechHH-HhhhhhhhhhhccCCCCCCHH
Confidence 99999999999999998888899999999876654 45667888999999999874 2221 1111 12331
Q ss_pred ------------CCceEEEEecChhhHHHHHHHHHHHhhhcCcceEEEcCCHHHHHHHHHHHHHHH---HHHHhcC----
Q 008252 380 ------------LPTLMFEFIGTQAYSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEAL---WACFAME---- 440 (572)
Q Consensus 380 ------------~~~l~~~~~g~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~lw~~R~~~~---~~~~~~~---- 440 (572)
.+.++++++|+++.++++.+.++++++++++.++.++.+.++...+|. |+..+ ++...+.
T Consensus 338 ~~~~l~~~~~~~~~~l~~e~~g~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~-R~~~~~~~p~~~~~~~~~~ 416 (560)
T 1e8g_A 338 ELDKIAKQLNLGRWNFYGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRV-RDKTMQGIPTYDELKWIDW 416 (560)
T ss_dssp HHHHHHHHHTCCSEEEEEEEESCHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHH-HHHHTTTCCCCGGGGGGGG
T ss_pred HHHHHHhhcCCCceEEEEEEeCCHHHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHH-HHhhcccCchhhhhccccc
Confidence 236889999998888888888999999888876666655555567775 87665 3322221
Q ss_pred -CCcceeeeeeeecc--hhHHHHHHHHHHHhccCCcEEEEEEEecCCceEEEE--eeCCCCHHHHHHHHHHHHHHHHHHH
Q 008252 441 -PSFEAMISDVCVPL--SCLAELISRSKKELDASPLICTVIAHAGDGNFHTVI--LFDPSKEEDRQEAERLNRFMVHTAL 515 (572)
Q Consensus 441 -~~~~~~~~D~~vP~--s~l~e~l~~~~~~~~~~~~~~~~~gH~gdG~~h~~i--~~~~~~~~~~~~~~~~~~~l~~~~~ 515 (572)
++...+++|+++|+ ++++++++.+++.++++++.+.+++|+||||+|+++ +|++.++++.++++++.+++++.+
T Consensus 417 ~~~~~~~~~d~~vP~~~~~l~~~~~~~~~~~~~~g~~~~~~gH~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~l~~~~- 495 (560)
T 1e8g_A 417 LPNGAHLFFSPIAKVSGEDAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDDC- 495 (560)
T ss_dssp STTEEEEEECBEECSSHHHHHHHHHHHHHHHHHHTCCCCEEEEECSSCEEEEEEEEEETTCHHHHHHHHHHHHHHHHHH-
T ss_pred cCCCceEEEeeecCCCHHHHHHHHHHHHHHHHHcCCceEEEEEecCCeEEEEecccCCCCCHHHHHHHHHHHHHHHHHH-
Confidence 22234678999999 999999999999999999998899999999999987 588889999999999999999887
Q ss_pred hcCCeEEeccccccccHH--HH---HHhh---CHHHHHHHHHHHHhcCCCCCccCCCccC
Q 008252 516 SMEGTCTGEHGIGTGKMK--YL---EKEL---GTGALETMKRIKVALDPNNIMNPGKLIP 567 (572)
Q Consensus 516 ~~gG~~s~ehGiG~~k~~--~l---~~~~---g~~~~~~~~~lK~~~DP~gIlNPGk~~~ 567 (572)
.|||+|..|.+ |+ ..++ |+..+++|++||++|||+|||||||+++
T Consensus 496 -------~eHGiG~~k~~~~~l~~~~~~~~~~g~~~~~lm~~iK~~~DP~gILNPGk~~~ 548 (560)
T 1e8g_A 496 -------AANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPGKSGV 548 (560)
T ss_dssp -------HHTTCCBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred -------HHcCCcccccchhHHHHHHHHhccCCHHHHHHHHHHHHHcCccCCCCCCcccc
Confidence 38999999887 88 8889 8899999999999999999999999995
No 5
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=1.2e-61 Score=533.93 Aligned_cols=443 Identities=20% Similarity=0.234 Sum_probs=358.0
Q ss_pred HHHHHHHHHhcCC-CeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCC
Q 008252 113 QELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE-GHT 190 (572)
Q Consensus 113 ~~~~~~L~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~-g~~ 190 (572)
++++++|++++|. ++.++......|+.+++.....+..|.+||+|+|++||+++|++|+++++||+|+|+|||+. |++
T Consensus 18 ~~~~~~L~~~l~~~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~ 97 (520)
T 1wvf_A 18 NKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSA 97 (520)
T ss_dssp HHHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTT
T ss_pred HHHHHHHHHhcCCCeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCC
Confidence 3578999999985 67777766555666554432245689999999999999999999999999999999999997 666
Q ss_pred CC-CCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCccCCC--CCC-cccccccccccccCCCccccc
Q 008252 191 LS-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLD--PGP-GATIGGMCATRCSGSLAVRYG 266 (572)
Q Consensus 191 ~~-~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~--~~~-~~tvGG~v~~~~~G~~~~~yG 266 (572)
.+ ..+|++|||++||+|+++|+++.+++||||++|.+|+++|.++|+.++.+ |.. .+||||++++|++|.. +||
T Consensus 98 ~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG 175 (520)
T 1wvf_A 98 APVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYG 175 (520)
T ss_dssp SCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTC
T ss_pred CCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--ccc
Confidence 55 36799999999999988999999999999999999999999999998876 433 5999999999998875 999
Q ss_pred cccceeeeEEEEeeCCcEEEcccccccC---------cCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCC
Q 008252 267 TMRDNVINLKVVLANGDVVKTASRARKS---------AAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPT 337 (572)
Q Consensus 267 ~~~D~v~~~~vV~~dG~i~~~~~~~~~~---------~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~ 337 (572)
.+.|+|++++||++||++++++....++ ..||||..++.| ++|||||+++||++|.|+....+.+.|++
T Consensus 176 ~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g--~~lGiVt~~~l~l~p~p~~~~~~~~~f~~ 253 (520)
T 1wvf_A 176 EHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQ--ANYGICTKMGFWLMPKPPVFKPFEVIFED 253 (520)
T ss_dssp BGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTT--SSSCEEEEEEEECEECCSEEEEEEEEECC
T ss_pred chhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccC--CceEEEEEEEEEEEecCCeEEEEEEEeCC
Confidence 9999999999999999999986432222 357888887764 49999999999999999988888889999
Q ss_pred HHHHHH---HHHHHHHcCCceeeeeeccHHHHHHHHhhc-----C--CCCC-------------CCCceEEEEecChhhH
Q 008252 338 IKDAAD---VAIATMLSGIQVSRVELLDEVQVRAVNIAN-----G--KNLP-------------ELPTLMFEFIGTQAYS 394 (572)
Q Consensus 338 ~~~a~~---~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~-----~--~~~~-------------~~~~l~~~~~g~~~~~ 394 (572)
.+++.+ ++.++...++.|.++|+||...+..+.... . ..+| ....+++++.|+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~v 333 (520)
T 1wvf_A 254 EADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQEQV 333 (520)
T ss_dssp GGGHHHHHHHHHHHHHTTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEEEEEEESHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEeccHHHHHHHhcccchhhccCCCCCCHHHHHHHHHhcCCCceEEEEEEeCCHHHH
Confidence 877655 556666788889999999998665543200 0 1122 1236788899998888
Q ss_pred HHHHHHHHHHhhhcCcceEEEcCCHHHHHHHHHHHHHHHH---HHHhcC-----CCcceeeeeeeecc--hhHHHHHHHH
Q 008252 395 HEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALW---ACFAME-----PSFEAMISDVCVPL--SCLAELISRS 464 (572)
Q Consensus 395 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~lw~~R~~~~~---~~~~~~-----~~~~~~~~D~~vP~--s~l~e~l~~~ 464 (572)
+++.+.+++++++.++..+....+. +...+|..|+..+. ...... .....+..|+++|. ++++++++.+
T Consensus 334 ~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vp~~~~~l~~~~~~~ 412 (520)
T 1wvf_A 334 DVNWKIVTDVFKKLGKGRIVTQEEA-GDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMA 412 (520)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEHHHH-TTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEecccc-hhhhHHHHHHHhhccCchhhhhccccccCCCceEEeccccCCCHHHHHHHHHHH
Confidence 8888888898888777665544433 45689999987652 111111 11224568889998 9999999999
Q ss_pred HHHhccCCcEEEEEEEecCCceEEEE--eeCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEecccccccc--HHHH---HH
Q 008252 465 KKELDASPLICTVIAHAGDGNFHTVI--LFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGK--MKYL---EK 537 (572)
Q Consensus 465 ~~~~~~~~~~~~~~gH~gdG~~h~~i--~~~~~~~~~~~~~~~~~~~l~~~~~~~gG~~s~ehGiG~~k--~~~l---~~ 537 (572)
++.++++++....++|+||||+|+++ .|+..++++.++++++.+++++.+. |||+|..| .+|+ .+
T Consensus 413 ~~~~~~~~~~~~~~gh~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------ehG~G~~k~~~~~~~~~~~ 484 (520)
T 1wvf_A 413 KRVLHKYGLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDEFE--------KEGYAVYRVNTRFQDRVAQ 484 (520)
T ss_dssp HHHHHHTTCCCCEEEEECSSEEEEEEEEEEETTCHHHHHHHHHHHHHHHHHHH--------HTTCCBSCCCGGGHHHHHH
T ss_pred HHHHHHcCCCeeEeecccCcceeeeeccccCCCCHHHHHHHHHHHHHHHHHHH--------HcCCCccccChhHhhhhhh
Confidence 99999999988899999999999976 7888888888888899999888764 57777776 3455 88
Q ss_pred hhCHHHHHHHHHHHHhcCCCCCccCCCccCC
Q 008252 538 ELGTGALETMKRIKVALDPNNIMNPGKLIPP 568 (572)
Q Consensus 538 ~~g~~~~~~~~~lK~~~DP~gIlNPGk~~~~ 568 (572)
++|+..+++|++||++|||+|||||||+++.
T Consensus 485 ~~g~~~~~lmr~IK~a~DP~~IlNPGki~~~ 515 (520)
T 1wvf_A 485 SYGPVKRKLEHAIKRAVDPNNILAPGRSGID 515 (520)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCCBCTTGGGCC
T ss_pred hcCHHHHHHHHHHHHHcCCCCCCCCCcCCCC
Confidence 9999999999999999999999999999964
No 6
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=5.1e-62 Score=537.49 Aligned_cols=433 Identities=17% Similarity=0.171 Sum_probs=350.8
Q ss_pred cHHHHHHHHHhcC-CCeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCC
Q 008252 112 PQELVDELKAICQ-DDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT 190 (572)
Q Consensus 112 ~~~~~~~L~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~ 190 (572)
.++++++|++++| .++.++..++..|.+++. ...+.|.+||+|+|++||+++|++|+++++||+|+|||||+.|++
T Consensus 9 ~~~~~~~L~~~~g~~~v~~~~~~~~~y~~d~~---~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~ 85 (571)
T 1f0x_A 9 NKAFLNELARLVGSSHLLTDPAKTARYRKGFR---SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGS 85 (571)
T ss_dssp CHHHHHHHHHHHCGGGEECCHHHHHHHHBCSS---SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTT
T ss_pred hHHHHHHHHHhcCCCeEEcCHHHHHHHhcccc---ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCc
Confidence 3568899999999 578888766655655433 234689999999999999999999999999999999999999988
Q ss_pred CCCC-----CcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCccCCCCC---CcccccccccccccCCCc
Q 008252 191 LSPN-----GGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG---PGATIGGMCATRCSGSLA 262 (572)
Q Consensus 191 ~~~~-----~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~---~~~tvGG~v~~~~~G~~~ 262 (572)
.+.+ ++++|||++||+|+++| ++++|+||||++|.+|+++|.++|+.+|.+++ +++||||++++|++|..+
T Consensus 86 ~~~~~~~~r~gvvIdl~rmn~I~~id-~~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~ 164 (571)
T 1f0x_A 86 TPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLV 164 (571)
T ss_dssp SCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCT
T ss_pred cCCCcCCcCceEEEECcccCCceeEC-CCCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccc
Confidence 8754 38999999999998898 46789999999999999999999998877664 357999999999999999
Q ss_pred cccccccc----------------eeeeEEEEeeCCcEEEcccccc------------cCcCCc----------------
Q 008252 263 VRYGTMRD----------------NVINLKVVLANGDVVKTASRAR------------KSAAGY---------------- 298 (572)
Q Consensus 263 ~~yG~~~D----------------~v~~~~vV~~dG~i~~~~~~~~------------~~~~g~---------------- 298 (572)
.+||.+.| +|++++||++||++++++.... ++..||
T Consensus 165 ~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~ 244 (571)
T 1f0x_A 165 QRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYN 244 (571)
T ss_dssp TSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCT
T ss_pred cCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCccccccccccccccccc
Confidence 99999999 9999999999999988764322 566889
Q ss_pred -cchhhh--hcCCCCeEEEEEEEEeeeccccceEEEEEecCCHHHHHHHHHHHHH-cCCceeeeeeccHHHHHHHHhh--
Q 008252 299 -DLTRLI--IGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIATML-SGIQVSRVELLDEVQVRAVNIA-- 372 (572)
Q Consensus 299 -dl~~~~--~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~-~~~~~~~~e~~d~~~~~~~~~~-- 372 (572)
||++++ +||+|+||| |++|||++|.|+....+.+.|++.+++.+++.+++. .+..|.++|+||...++..+..
T Consensus 245 ~Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~a~E~~d~~~~~~~~~~~~ 323 (571)
T 1f0x_A 245 ADPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGK 323 (571)
T ss_dssp TCGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC----
T ss_pred ccHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhcc
Confidence 999999 999999999 999999999999888889999999999999988884 6788999999999887665433
Q ss_pred --------cC-CCC-----------------C--------------------------------CCCceEEEEecChhhH
Q 008252 373 --------NG-KNL-----------------P--------------------------------ELPTLMFEFIGTQAYS 394 (572)
Q Consensus 373 --------~~-~~~-----------------~--------------------------------~~~~l~~~~~g~~~~~ 394 (572)
.+ ... | ....+++++.|.....
T Consensus 324 ~~~~~i~~~~~~~~p~~~~~k~~~~~~~~~~p~l~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~llve~~g~~~~~ 403 (571)
T 1f0x_A 324 DTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGE 403 (571)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHCSEEEEEEECTTHHHH
T ss_pred cccccccccCcccccchhcccchhhhhhcccccccccchhhhhhhhhhccccccchhhhcccccCceEEEEEEecCcHHH
Confidence 11 001 1 1236888998876532
Q ss_pred HHHHHHHHHHhhhcCcceEEEcCCHHHHHHHHHHHHHHH---HHHHhcCCC-c-ceeeeeeeecchhHHHHHHHHHHHhc
Q 008252 395 HEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEAL---WACFAMEPS-F-EAMISDVCVPLSCLAELISRSKKELD 469 (572)
Q Consensus 395 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~lw~~R~~~~---~~~~~~~~~-~-~~~~~D~~vP~s~l~e~l~~~~~~~~ 469 (572)
..+.+++++....+. .+....++.+..|..|+... |........ . ..+..|++||+++++++ +.+++.++
T Consensus 404 --~~~~l~~~~~~~~g~--~~~~~~~~~~~~~~~R~~~~~~~~~~r~~~~~~~g~~~~~Dvavp~~~l~~~-~~~~~~l~ 478 (571)
T 1f0x_A 404 --AKSWLVDYFKQAEGD--FFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWY-EHLPPEID 478 (571)
T ss_dssp --HHHHHHHHHHHSSCE--EEECCHHHHHHHHHHHTTHHHHHHHHHHHTTTTEEEEEEEEEECCTTCSCCS-CCCCHHHH
T ss_pred --HHHHHHHHHHHcCCC--eeecCccHHHHHHHHhhhhhhHHHHhhhcchhhcCCceEEEEEecHHHhHHH-HHHHHHHH
Confidence 234456676666443 23335667778888887554 554433222 1 24789999999999999 99999999
Q ss_pred cCCcEEEEEEEecCCceEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEeccccccccHHHHHHhhCHHHHHHHHH
Q 008252 470 ASPLICTVIAHAGDGNFHTVILFDPSKEEDRQEAERLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKR 549 (572)
Q Consensus 470 ~~~~~~~~~gH~gdG~~h~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~gG~~s~ehGiG~~k~~~l~~~~g~~~~~~~~~ 549 (572)
++++....+||+|+||+|+.+.++...+ ++++.+.+.+.+.++||++|+|||+|.. | +.+.. |++
T Consensus 479 ~~~~~~~~~GH~g~g~~H~~~~~~~~~~-----~~~i~~~~~~~v~~~GGsisaEHGvG~~---~-----~~~~~--m~~ 543 (571)
T 1f0x_A 479 SQLVHKLYYGHFMCYVFHQDYIVKKGVD-----VHALKEQMLELLQQRGAQYPAEHNVGHL---Y-----KAPET--LQK 543 (571)
T ss_dssp TTEEEEEEEEETTTTEEEEEEEEETTCC-----HHHHHHHHHHHHHHTTCBSCSSSCCTTT---S-----CCCHH--HHH
T ss_pred hhCccceeEEEEcCCceEEeeecCCchh-----HHHHHHHHHHHHHHcCCeEEeeccCCcc---c-----CCHHH--HHH
Confidence 8888888999999999999888754321 3568889999999999999999999996 2 22122 999
Q ss_pred HHHhcCCCCCccCCCccCCC
Q 008252 550 IKVALDPNNIMNPGKLIPPH 569 (572)
Q Consensus 550 lK~~~DP~gIlNPGk~~~~~ 569 (572)
||++|||+|||||||++++.
T Consensus 544 iK~~~DP~~ilNPGk~~t~~ 563 (571)
T 1f0x_A 544 FYRENDPTNSMNPGIGKTSK 563 (571)
T ss_dssp HHHHHCTTCCBSTTTTTCCC
T ss_pred HHHHhCCCCCCCCCcCcCCc
Confidence 99999999999999999753
No 7
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=4.3e-56 Score=489.24 Aligned_cols=418 Identities=19% Similarity=0.257 Sum_probs=315.9
Q ss_pred CcHHHHHHHHHhcCCCeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHh-CCCCEEEECCCCCCCCC
Q 008252 111 IPQELVDELKAICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDK-HKVPIIPYGGATSIEGH 189 (572)
Q Consensus 111 ~~~~~~~~L~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~-~~~~v~~~GgG~s~~g~ 189 (572)
+.++++++|+ +.+++.++...+..|++++.+.+ ...|.+|++|+|++||+++|++|++ +++||+|+|||||+.|+
T Consensus 26 ~~~~~~~~l~--~~~~v~~d~~~~~~~~~d~~~~~--~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~ 101 (524)
T 2exr_A 26 STDGVSESLN--IQGEILCGGAAADIAGRDFGGMN--CVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQ 101 (524)
T ss_dssp --------CC--CSSEEECSHHHHHHHTCCTTCCC--CCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSST
T ss_pred cHHHHHHhcC--CCCeEEeCHHHHHHHhccccccc--cCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCc
Confidence 3445666776 46778888878777776654433 4689999999999999999999996 99999999999999988
Q ss_pred CCCCCCcEEEEcCCCCCcEEecc-----CC--CeEEEcCCCCHHHHH-HHHccCCCccCCCCC--CcccccccccccccC
Q 008252 190 TLSPNGGVCIDLSLMKSVKALHI-----ED--MDVVVEPGIGWMELN-EYLEPYGLFFPLDPG--PGATIGGMCATRCSG 259 (572)
Q Consensus 190 ~~~~~~gvvIdl~~mn~i~~~~~-----~~--~~v~v~aGv~~~~L~-~~L~~~Gl~l~~~~~--~~~tvGG~v~~~~~G 259 (572)
+.+. +|++|||++||+| ++++ ++ .+++||||++|.++. +.|+++|+. |.++. ..+||||++++|++|
T Consensus 102 ~~~~-~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G 178 (524)
T 2exr_A 102 AMAE-GGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVS 178 (524)
T ss_dssp TCCT-TSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCC
T ss_pred ccCC-CEEEEECcCCCCc-EEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCc
Confidence 8764 7899999999999 6776 55 799999999999975 555599998 54443 359999999999999
Q ss_pred CCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCCHH
Q 008252 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIK 339 (572)
Q Consensus 260 ~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~~ 339 (572)
..+.+||.+.|+|++++||++||++++++.. .++||+++++||+|+|||||++||||+|.|+...+..+.|++++
T Consensus 179 ~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~-----~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~ 253 (524)
T 2exr_A 179 GQAFRYGPQTSNVTELDVVTGNGDVVTCSEI-----ENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFD 253 (524)
T ss_dssp TTHHHHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHH
T ss_pred ccccccCcHhhhEEEEEEEecCCeEEEECCC-----CChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHH
Confidence 9999999999999999999999999998653 57999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHcCCceeeeeeccHHHHHHH----Hhhc-----------CCCCC---CCCceEEEE-----ec-ChhhHH
Q 008252 340 DAADVAIATMLSGIQVSRVELLDEVQVRAV----NIAN-----------GKNLP---ELPTLMFEF-----IG-TQAYSH 395 (572)
Q Consensus 340 ~a~~~~~~~~~~~~~~~~~e~~d~~~~~~~----~~~~-----------~~~~~---~~~~l~~~~-----~g-~~~~~~ 395 (572)
++.+++..++..+.. ..+|++|...+... +... ...+| ....+++++ .| +.+.++
T Consensus 254 ~~~~~~~~l~~~~~~-~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve~~~~~~~g~~~~~v~ 332 (524)
T 2exr_A 254 EFTQDAEWLVSQKNE-SSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTID 332 (524)
T ss_dssp HHHHHHHHHHTSCTT-SSCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEEEEEEECTTSCHHHHH
T ss_pred HHHHHHHHHHHcCCc-chhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEEEEeecCCCCCHHHHH
Confidence 999999888877766 67777775322110 0000 01233 234678888 67 566777
Q ss_pred HHHHHHHHHhhhcCcceEE-------EcCCHHHHHHHHHHHHHHHHHHHhcCCCcceeeeeeeecchhHHHHHHHHHHHh
Q 008252 396 EQTLIVQKIVSEHNGTDFI-------FAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKEL 468 (572)
Q Consensus 396 ~~~~~~~~i~~~~~g~~~~-------~~~~~~~~~~lw~~R~~~~~~~~~~~~~~~~~~~D~~vP~s~l~e~l~~~~~~~ 468 (572)
++.+.+.++++..++..+. ++.+..+ ..|..|+..+|... .| +.|++||+++++++++.+++
T Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~W~~R~~~~~a~~--~~-----~~Dv~VP~s~l~~~~~~v~~-- 401 (524)
T 2exr_A 333 KRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKR--SEEIAKENGTWETP--HP-----WLNLFVSKRDIGDFNRTVFK-- 401 (524)
T ss_dssp HHHHHHHTTCCCCTTCEEEEEEEHHHHHTTTHH--HHHHHHHTTCSSSC--CC-----CEEEEEEHHHHHHHHHHCCC--
T ss_pred HHHHHHHHHHHhCCCeEeecccchhhhhhhhhh--HHHHhhhhcccccC--CC-----eeEEEECHHHHHHHHHHHHH--
Confidence 7777777788777766443 3333222 34999987776432 12 34999999999999987654
Q ss_pred ccCCcEEEEEEEecCCceEEEEeeCCCCH--------------------------------HHHHHHHHHHHHHHHHHHh
Q 008252 469 DASPLICTVIAHAGDGNFHTVILFDPSKE--------------------------------EDRQEAERLNRFMVHTALS 516 (572)
Q Consensus 469 ~~~~~~~~~~gH~gdG~~h~~i~~~~~~~--------------------------------~~~~~~~~~~~~l~~~~~~ 516 (572)
+|+||||+|++++++..++ ...+.+++.++++.+.+..
T Consensus 402 ----------~~~gdgn~h~~i~~~~~~~~~~~r~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 471 (524)
T 2exr_A 402 ----------ELVKNGVNGPMLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFVPPCAKVSSVEKMVAQNQEIVHWCVK 471 (524)
T ss_dssp ----------CCTTTCCSSCEEEEEEEGGGSCTTSSCCCCSSCSEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------HHhCCCCcceEEEEeCCchHHHhHHHhhCCCCccEEEEEEEeccCCCcccchHHHHHHHHHHHHHHHHHH
Confidence 6788888888776632111 2233344556667766666
Q ss_pred cC----CeEEeccccccccHHHHHHhhCHHHHHHHHHHHHhcCCCCCccCCC-ccCC
Q 008252 517 ME----GTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGK-LIPP 568 (572)
Q Consensus 517 ~g----G~~s~ehGiG~~k~~~l~~~~g~~~~~~~~~lK~~~DP~gIlNPGk-~~~~ 568 (572)
.| ++++++|+ +.+| .+++|+ .+++|++||+.|||+||||||| +|+.
T Consensus 472 ~G~~~~~yl~~~~~----~~~w-~~~~G~-~~~~m~~iK~~~DP~~iLnPG~~if~~ 522 (524)
T 2exr_A 472 NGIDYKLYLPHYKS----QEEW-IRHFGN-RWSRFVDRKAMFDPMAILSPGQKIFNR 522 (524)
T ss_dssp TTCCEEESSCCCCS----HHHH-HHHHGG-GHHHHHHHHHHHCTTCCBCGGGCSSCC
T ss_pred cCCccEEeecCCCC----HHHH-HHHhhh-HHHHHHHHHhhcCchhhcCCCCccCCC
Confidence 66 33666664 4456 567886 7899999999999999999998 5554
No 8
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=7.9e-54 Score=473.19 Aligned_cols=434 Identities=14% Similarity=0.197 Sum_probs=317.4
Q ss_pred HHHHHHHH-hcCCCeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHh--C-CCCEEEECCCCCCCCC
Q 008252 114 ELVDELKA-ICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDK--H-KVPIIPYGGATSIEGH 189 (572)
Q Consensus 114 ~~~~~L~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~--~-~~~v~~~GgG~s~~g~ 189 (572)
+++++|++ .+.+++.++......+..++... ..+.|.+|++|+|++||+++|++|++ + ++|++|+|||||+.|.
T Consensus 33 ~~~~~l~~~~~~~~v~~~~~~~~~~~~d~~~~--~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~ 110 (534)
T 1w1o_A 33 PWPASLAALALDGKLRTDSNATAAASTDFGNI--TSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQ 110 (534)
T ss_dssp -------CTTTTTCEECSHHHHHHTSCCTTCS--CCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSST
T ss_pred HHHHHHHhcCCCceEecCHHHHHHHhcccccc--ccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC
Confidence 46678888 55568888877766666655432 35689999999999999999999997 6 9999999999999988
Q ss_pred CCCCCCcEEEEcCCCCCc-----EEeccCCCeEEEcCCCCHHHHHHHHccCCCccCCCCC-CcccccccccccccCCCcc
Q 008252 190 TLSPNGGVCIDLSLMKSV-----KALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG-PGATIGGMCATRCSGSLAV 263 (572)
Q Consensus 190 ~~~~~~gvvIdl~~mn~i-----~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~-~~~tvGG~v~~~~~G~~~~ 263 (572)
+.+ .+|++|||++||+| +++|+++.+++||||++|.+|++++.++|+..+..++ ..+||||++++|++|..+.
T Consensus 111 ~~~-~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~ 189 (534)
T 1w1o_A 111 AFA-PGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAF 189 (534)
T ss_dssp TCC-TTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHH
T ss_pred cCC-CCeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCcccccc
Confidence 765 47999999999998 7889888999999999999999999999997554333 4799999999999999999
Q ss_pred ccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCCHHHHHH
Q 008252 264 RYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAAD 343 (572)
Q Consensus 264 ~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~~~a~~ 343 (572)
+||.++|+|++++||++||++++++.. .++||+|+++|++|+|||||++|||++|.|+...+..+.|++++++.+
T Consensus 190 ~yG~~~d~v~~~evV~~dG~v~~~~~~-----~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~ 264 (534)
T 1w1o_A 190 RHGPQISNVLEMDVITGHGEMVTCSKQ-----LNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSA 264 (534)
T ss_dssp HHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHH
T ss_pred ccccHhhhEEEEEEEeCCccEEEECCC-----CChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHH
Confidence 999999999999999999999988654 579999999999999999999999999999988888888999999888
Q ss_pred HHHHHHHcCC-----ceeeeeeccHHHHH---HHHhhcCC-C-----------CC----CCCceEEEEe----cCh---h
Q 008252 344 VAIATMLSGI-----QVSRVELLDEVQVR---AVNIANGK-N-----------LP----ELPTLMFEFI----GTQ---A 392 (572)
Q Consensus 344 ~~~~~~~~~~-----~~~~~e~~d~~~~~---~~~~~~~~-~-----------~~----~~~~l~~~~~----g~~---~ 392 (572)
....+...+. .+.++|++|...+. .++...+. . ++ ....+++++. |.. .
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~~~~~ 344 (534)
T 1w1o_A 265 DQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAA 344 (534)
T ss_dssp HHHHHHCBC------CBCSCSEEEEEEEEGGGHHHHHHTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC-------C
T ss_pred HHHHHHhcccccccccccchhHhhhhhhcccccccccccccccCccccccccccccccccceEEEEEEEEecCCCccchh
Confidence 8777766665 46778888753211 01111111 0 11 2235666765 533 4
Q ss_pred hHHHHHHHHHHHhhhcCcceEEEcC-----CHHHHHHHHHHHHHHHHHHHhcCCCcceeeeeeeecchhHHHHHHHHHHH
Q 008252 393 YSHEQTLIVQKIVSEHNGTDFIFAE-----DPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKE 467 (572)
Q Consensus 393 ~~~~~~~~~~~i~~~~~g~~~~~~~-----~~~~~~~lw~~R~~~~~~~~~~~~~~~~~~~D~~vP~s~l~e~l~~~~~~ 467 (572)
.++++.+.+.+.+...++..+.... .......+|..|+...|... .+ +. |++||+++++++++.+.+.
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~w~~r~~~~~~~~--~~----~~-d~~vP~s~l~~~~~~~~~~ 417 (534)
T 1w1o_A 345 AVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVP--HP----WL-NMFVPRSRIADFDRGVFKG 417 (534)
T ss_dssp HHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSC--CC----CE-EEEEEGGGHHHHHHHHTTT
T ss_pred hhHHHHHHHHHhhcccCCcceeccchHHHHhhhhhhhHHHHhhccccccC--Cc----cc-cEEecHHHHHhHHHHHHHH
Confidence 4444444444444444443322110 01112356888876554321 11 33 9999999999999988774
Q ss_pred hcc-CCc-----EEEEEEE---------ecCCceEEEEeeCCC--CHHHHHHHHHHHHHHHHHHHhcC----CeEEeccc
Q 008252 468 LDA-SPL-----ICTVIAH---------AGDGNFHTVILFDPS--KEEDRQEAERLNRFMVHTALSME----GTCTGEHG 526 (572)
Q Consensus 468 ~~~-~~~-----~~~~~gH---------~gdG~~h~~i~~~~~--~~~~~~~~~~~~~~l~~~~~~~g----G~~s~ehG 526 (572)
+.+ .+. .+.+.+| .+|||+|+++.++.. ++++.++.+++.+++.+.+.+.+ +.+..+|
T Consensus 418 l~~~~~~~~~~~~~~~~gh~~~~~~s~v~~dgn~h~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~yl~~~~- 496 (534)
T 1w1o_A 418 ILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHT- 496 (534)
T ss_dssp TTTTSCCCSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHTTCCCEESSCCCS-
T ss_pred HhhccCCcccEEEeecccccccccccccCCCccEEEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhCCCcEEECCCCC-
Confidence 433 221 2334467 689999998877554 33344556778888888888864 2334444
Q ss_pred cccccHHHHHHhhCHHHHHHHHHHHHhcCCCCCccCCC-ccC
Q 008252 527 IGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGK-LIP 567 (572)
Q Consensus 527 iG~~k~~~l~~~~g~~~~~~~~~lK~~~DP~gIlNPGk-~~~ 567 (572)
.+.+| .++||++.+++|++||++|||+||||||| +|+
T Consensus 497 ---~~~~w-~~~~G~~~~~~l~~iK~~~DP~~ilnpgk~I~~ 534 (534)
T 1w1o_A 497 ---DRSDW-VRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN 534 (534)
T ss_dssp ---SHHHH-HHHHCHHHHHHHHHHHHHHCTTCCBCGGGCSCC
T ss_pred ---ChHHH-HHHhCHHHHHHHHHHHHhcCchhhcCCCCcCCC
Confidence 25667 56899888999999999999999999999 664
No 9
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=3.3e-40 Score=354.52 Aligned_cols=374 Identities=17% Similarity=0.143 Sum_probs=262.2
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHH
Q 008252 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWME 227 (572)
Q Consensus 148 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~ 227 (572)
...|.+|++|+|++||+++|++| +|+.++|||||+.+.+.+..+|++|||++||+|+++|+++.+|+||||+++.+
T Consensus 18 ~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~ 93 (422)
T 2vfr_A 18 TYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAE 93 (422)
T ss_dssp BCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHH
T ss_pred cCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHH
Confidence 45899999999999999999999 89999999999988877445789999999999988999999999999999999
Q ss_pred HHHHHccCCCccCCCCCC-cccccccccccccCCCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhc
Q 008252 228 LNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIG 306 (572)
Q Consensus 228 L~~~L~~~Gl~l~~~~~~-~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~G 306 (572)
|+++|.++|+.+|..++. .+||||++++|++|.. ..||.++|+|+++++|++||++++++.. ++ . |++++|
T Consensus 94 l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~--~~---~--f~~~~g 165 (422)
T 2vfr_A 94 LARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARG--DE---R--FGGAVT 165 (422)
T ss_dssp HHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETT--ST---T--GGGTSS
T ss_pred HHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCC--CC---C--cceEEe
Confidence 999999999999864544 5899999999999985 6999999999999999999999998754 21 2 799999
Q ss_pred CCCCeEEEEEEEEeeeccccceEEEEEecCCHHHHH-HHHHHHHHcCCceeeeeeccHHHHHH--HHhhcC--CCCCCCC
Q 008252 307 SEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAA-DVAIATMLSGIQVSRVELLDEVQVRA--VNIANG--KNLPELP 381 (572)
Q Consensus 307 s~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~~~a~-~~~~~~~~~~~~~~~~e~~d~~~~~~--~~~~~~--~~~~~~~ 381 (572)
++|+|||||++|||+.|.|+....... +.+++++. +.+.++. ..+..+|+++ ...+. ...... ...+..+
T Consensus 166 ~~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~e~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (422)
T 2vfr_A 166 SLGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVM---AAAYSVSLFT-DWRAPGFRQVWLKRRTDRPLDG 240 (422)
T ss_dssp CTTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHH---TSSSEEEEEE-CSSSSSEEEEEEEEETTSCCCC
T ss_pred cCCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHH---hcCCcEEEEe-cCCCceeEEEEecCcCCCCCCC
Confidence 999999999999999999986655543 67888887 7776655 2456777776 33211 000000 0000000
Q ss_pred -ceEEEEecChhhHHHHHHHHHHHhhhcCc-ceEEEcCCHHHHHHHHHHHHHHHHHHHhcCCC-cceeeeeeeecchhHH
Q 008252 382 -TLMFEFIGTQAYSHEQTLIVQKIVSEHNG-TDFIFAEDPEAKKELWKMRKEALWACFAMEPS-FEAMISDVCVPLSCLA 458 (572)
Q Consensus 382 -~l~~~~~g~~~~~~~~~~~~~~i~~~~~g-~~~~~~~~~~~~~~lw~~R~~~~~~~~~~~~~-~~~~~~D~~vP~s~l~ 458 (572)
.+ .+. +.+....... ....+... .+....|..+... ......|. ...+..|++||++++.
T Consensus 241 ~~~-~~~-------------~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~p~~~~~~~~e~avP~e~~~ 303 (422)
T 2vfr_A 241 FPY-AAP-------------AAEKMHPVPGMPAVNCTEQ-FGVPGPWHERLPH--FRAEFTPSSGAELQSEYLMPREHAL 303 (422)
T ss_dssp CTT-SEE-------------CSSCCCSSTTSCGGGBCCC-TTCCEEGGGTSSS--BCTTCCCSCCSCEEEEEEEEGGGHH
T ss_pred chH-HHH-------------HHhhcccCcccChhhhccc-CCccccHHHhccc--ccccccCCcccEEEEEEEEEHHHHH
Confidence 00 000 0000000000 00000000 0000111111000 00000111 2334669999999999
Q ss_pred HHHHHHHHHhcc-CCcEE---EEEEEecCCceEE-------EEee-CCCCHHHHHHHHHHHHHHHHHHHhcCCeEE-ecc
Q 008252 459 ELISRSKKELDA-SPLIC---TVIAHAGDGNFHT-------VILF-DPSKEEDRQEAERLNRFMVHTALSMEGTCT-GEH 525 (572)
Q Consensus 459 e~l~~~~~~~~~-~~~~~---~~~gH~gdG~~h~-------~i~~-~~~~~~~~~~~~~~~~~l~~~~~~~gG~~s-~eh 525 (572)
++++++++.+++ ++..+ ..++|.++|.+|+ .+-| ...+ .+..+++.+++.+.+.++||.+. ++.
T Consensus 304 ~~l~~l~~~~~~~~~~~~~v~~r~~~~~~~~Ls~~~~r~~~~l~~~~~~~---~~~~~~~~~~~~~lv~~~gG~~~wgk~ 380 (422)
T 2vfr_A 304 AALHAMDAIRETLAPVLQTCEIRTVAADAQWLSPAYGRDTVAAHFTWVED---TAAVLPVVRRLEEALVPFAARPHWGKV 380 (422)
T ss_dssp HHHHHHHHTHHHHGGGEEEEEEEEECCBCSTTCTTBTSCEEEEEEEECSC---HHHHHHHHHHHHHHHGGGTCEECTTSC
T ss_pred HHHHHHHHHHHhCCCceeeEEEEeecCCccccCCCCCCCeEEEEEecCCC---chhHHHHHHHHHHHHHHcCCccccccc
Confidence 999999998876 33321 4578988887664 2222 2222 44566888999999999999985 443
Q ss_pred ccccccHHHHHHhhCHHHHHHHHHHHHhcCCCCCccC
Q 008252 526 GIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMNP 562 (572)
Q Consensus 526 GiG~~k~~~l~~~~g~~~~~~~~~lK~~~DP~gIlNP 562 (572)
+....+++.+.|+ .++.|+++|+.|||+|+||.
T Consensus 381 --~~~~~~~~~~~Yp--~~~~f~~vk~~~DP~g~f~n 413 (422)
T 2vfr_A 381 --FTVPAGELRALYP--RLADFGALAGALDPAGKFTN 413 (422)
T ss_dssp --CCCCHHHHHTTCT--THHHHHHHHHHHCTTCTTCC
T ss_pred --CCCCHHHHHHHCc--CHHHHHHHHHHhCCCCccCC
Confidence 3355677877786 68999999999999999996
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=6.1e-37 Score=332.38 Aligned_cols=394 Identities=17% Similarity=0.234 Sum_probs=256.7
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCH
Q 008252 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (572)
Q Consensus 146 ~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~ 225 (572)
+++..|.+|++|+|++||+++|++|+++++|++++|||||+.|.+. .++|++|||++||+| ++|+++.+|+||||++|
T Consensus 34 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~i-~~d~~~~~v~v~aG~~~ 111 (459)
T 2bvf_A 34 RHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNSI-HIDTAGSRARIGGGVIS 111 (459)
T ss_dssp TCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCCE-EEETTTTEEEEETTCBH
T ss_pred hccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCCE-EECCCCCEEEECCCCCH
Confidence 4567899999999999999999999999999999999999987664 357999999999999 58999999999999999
Q ss_pred HHHHHHHccCCCccCCCCCCcccccccccccccCCCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhh
Q 008252 226 MELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLII 305 (572)
Q Consensus 226 ~~L~~~L~~~Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~ 305 (572)
.+|+++|.++|+.+|.+.++.++|||++.+|++|.++++||.++|+|++++||++||++++++.. .++||||+++
T Consensus 112 ~~l~~~l~~~Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~-----~~~dLf~a~r 186 (459)
T 2bvf_A 112 GDLVKEAAKFGLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDD-----ERPELFWAVR 186 (459)
T ss_dssp HHHHHHHHTTTEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEESS-----SSHHHHHHHH
T ss_pred HHHHHHHHHcCCEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCCC-----CChhhHhHhh
Confidence 99999999999999998888899999999999999999999999999999999999999987653 4689999999
Q ss_pred cCCCCeEEEEEEEEeeeccccceEEEEEecCC--HH--HHHHHHHHHHHcCCceeeeeeccHHHHHHHHhhcCCCCCCCC
Q 008252 306 GSEGTLGIITEVTLRLQKIPQHSVVATCNFPT--IK--DAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGKNLPELP 381 (572)
Q Consensus 306 Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~--~~--~a~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~ 381 (572)
|++|+|||||+++||++|.|+......+.|+. .+ ++++.+.++.... +..+ +.. + .... .....+
T Consensus 187 g~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~------~-~~~~-~~~~~~ 255 (459)
T 2bvf_A 187 GAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNEM--ADHI-YPS------V-FVGV-DENRAP 255 (459)
T ss_dssp HHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTC-CCE------E-EEEE-CTTCCE
T ss_pred ccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHhC--cHhh-ccc------c-ccCc-ccCCCc
Confidence 99999999999999999997666555666664 33 4444444443321 1110 000 0 0000 001111
Q ss_pred c--eEEEEecChhhHHHHHHHHHHHhhhcCcceEEEcCCHHHHHHHHHHHHHHHHHHHhcCCCcceee--eeeeecchhH
Q 008252 382 T--LMFEFIGTQAYSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMI--SDVCVPLSCL 457 (572)
Q Consensus 382 ~--l~~~~~g~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~lw~~R~~~~~~~~~~~~~~~~~~--~D~~vP~s~l 457 (572)
. +.+.+.|+.+..++..+.+.++.. ...+......-. .+... . .......+...... ....+|.+..
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~-~---~~~~~~~~~~~~~~~~~s~~~~~~~~ 326 (459)
T 2bvf_A 256 SVTVCVGHLGGLDIAERDIARLRGLGR--TVSDSIAVRSYD---EVVAL-N---AEVGSFEDGMSNLWIDREIAMPNARF 326 (459)
T ss_dssp EEEEEEECCSCHHHHHHHHHHHHTTSC--CSEECCEEECHH---HHHHH-H---HHHSCCCCSCEEEEEEEEECSCHHHH
T ss_pred eEEEEEEEeCCHHHHHHHHHHHHHhCc--chhcceeecCHH---HHHhc-c---cccccCCCCCcceEeccccccCCCCC
Confidence 2 334566766555444444433321 111111111111 11111 0 00001122222223 3455664444
Q ss_pred HHHHHHHHHHhccCC--c-EEEEEEEec-------------CCceEEEEe--eCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 008252 458 AELISRSKKELDASP--L-ICTVIAHAG-------------DGNFHTVIL--FDPSKEEDRQEAERLNRFMVHTALSMEG 519 (572)
Q Consensus 458 ~e~l~~~~~~~~~~~--~-~~~~~gH~g-------------dG~~h~~i~--~~~~~~~~~~~~~~~~~~l~~~~~~~gG 519 (572)
.+.++.+.+.+...+ . .+.+..+-| +..+ +.+. +....+ .-+...++.+.+.+.+.++.+
T Consensus 327 ~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~ta~~~R~~~~-~~~~~~w~~~~~-~~~~~~~~~~~~~~~l~~~~~ 404 (459)
T 2bvf_A 327 AEAIAGNLDKFVSEPASGGSVKLEIEGMPFGNPKRTPARHRDAMG-VLALAEWSGAAP-GSEKYPELARELDAALLRAGV 404 (459)
T ss_dssp HHHHHTTGGGCEEETTTTEEEEEEEECCCCCCTTCCSSCCCSSCE-EEEEEEECTTST-TTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhCCCCCceeEEEEeCCccCCCCCCCcccCCcce-EEEEEEeCCCcc-chHHHHHHHHHHHHHhccccc
Confidence 566666666554422 1 111111111 2223 3222 222110 112235566667777777765
Q ss_pred eEEe-c-ccc-ccccHHHHHHhhCHHHHHHHHHHHHhcCCCCCccCCCccCC
Q 008252 520 TCTG-E-HGI-GTGKMKYLEKELGTGALETMKRIKVALDPNNIMNPGKLIPP 568 (572)
Q Consensus 520 ~~s~-e-hGi-G~~k~~~l~~~~g~~~~~~~~~lK~~~DP~gIlNPGk~~~~ 568 (572)
.+.. - +.. .....+|....||++.++.+++||+++||+|+|.-..=++|
T Consensus 405 ~p~~g~Y~N~~d~~~~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 405 TTSGFGLLNNNSEVTAEMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDP 456 (459)
T ss_dssp EEEEECCGGGCSSCCHHHHHHHHCHHHHHHHHHHHHHHCTTCCCCSSSCCCC
T ss_pred CCCCCeeeCCCCCcchHHHHHHhCcchHHHHHHHHHHhCcccccCCCCCCCC
Confidence 3321 1 111 00125688889998679999999999999999976655544
No 11
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=3.5e-37 Score=337.70 Aligned_cols=228 Identities=22% Similarity=0.271 Sum_probs=185.8
Q ss_pred cHHHHHHHHHhcCCC-eeeChhhhhhc---cCCC---CccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCC
Q 008252 112 PQELVDELKAICQDD-MTMDYEERYIH---GKPQ---NSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGAT 184 (572)
Q Consensus 112 ~~~~~~~L~~~lg~~-~~~~~~~~~~~---~~~~---~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~ 184 (572)
.+++++.|.+.++.. +.++.+..|.. ...+ ++. ....+|.+||+|+|++||+++|++|+++++||++|||||
T Consensus 8 ~~~f~~~L~~~~~~~~v~~~~~~~y~~~~~~~~~n~rw~~-~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh 86 (500)
T 3tsh_A 8 KEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRNSRWSS-PDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGH 86 (500)
T ss_dssp -CHHHHHHHHHSCGGGEEETTSTTHHHHHHTTCCCTTTTS-TTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHHHhhCCCCEEECCCCCccHHHHHhhhccccccC-CCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCc
Confidence 356889999988764 44554444321 1111 111 223589999999999999999999999999999999999
Q ss_pred CCCCCCC---CCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCc--cCCCCCCcccccccccccccC
Q 008252 185 SIEGHTL---SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF--FPLDPGPGATIGGMCATRCSG 259 (572)
Q Consensus 185 s~~g~~~---~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~--l~~~~~~~~tvGG~v~~~~~G 259 (572)
++.|.+. ..++|++|||++||+| ++|+++.+++||||++|.+|+++|.++|+. ++.+.++.+++||++++||+|
T Consensus 87 ~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g 165 (500)
T 3tsh_A 87 DYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFG 165 (500)
T ss_dssp CTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCC
T ss_pred CCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCC
Confidence 9987654 3478999999999998 599999999999999999999999998854 666778889999999999999
Q ss_pred CCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhc-CCCCeEEEEEEEEeeeccccceEEEEEecCCH
Q 008252 260 SLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIG-SEGTLGIITEVTLRLQKIPQHSVVATCNFPTI 338 (572)
Q Consensus 260 ~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~G-s~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~ 338 (572)
..+++||..+|+|+++|||++||+++.... .+.||||+++| ++|+|||||++|||++|.|+....+...+...
T Consensus 166 ~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~------~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 166 MLLRKYGIAAENVIDVKLVDANGKLHDKKS------MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEECHHH------HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred ccccccCChhhheeeEEEECCCceEEECCC------CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 999999999999999999999999875322 36799999995 57899999999999999998777666666555
Q ss_pred HHHHHHHHH
Q 008252 339 KDAADVAIA 347 (572)
Q Consensus 339 ~~a~~~~~~ 347 (572)
+.+.+++..
T Consensus 240 ~~~~~~~~~ 248 (500)
T 3tsh_A 240 EGAVDIINK 248 (500)
T ss_dssp TTHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555544
No 12
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=3.5e-35 Score=318.90 Aligned_cols=216 Identities=21% Similarity=0.219 Sum_probs=183.3
Q ss_pred CeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCC-CCCcEEEEcCCC
Q 008252 126 DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS-PNGGVCIDLSLM 204 (572)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~-~~~gvvIdl~~m 204 (572)
.+.++.+..|......++ .+++..|.+||+|+|++||+++|++|+++++|+.++|||||+.|.+.. .+++++|||++|
T Consensus 13 ~v~~p~~~~y~~~~~~~n-~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~ 91 (473)
T 3rja_A 13 PIDIPGTADYERDVEPFN-IRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGENGHLMVQLDRM 91 (473)
T ss_dssp CBCCTTSHHHHHHTCCSB-TTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSSSSCEEEECTTC
T ss_pred cEECCCCCchHHHHHHhh-cccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCCCCeEEEECCCC
Confidence 455555555543222222 245679999999999999999999999999999999999999865543 367899999999
Q ss_pred CCcEEeccCCCeEEEcCCCCHHHHHHHHccCC-CccCCCCCCcccccccccccccCCCccccccccceeeeEEEEeeCCc
Q 008252 205 KSVKALHIEDMDVVVEPGIGWMELNEYLEPYG-LFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGD 283 (572)
Q Consensus 205 n~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~G-l~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~ 283 (572)
|+|.++|+++.+++||||++|.+|+++|.++| +.+|.+.++.++|||++++|++|..+++||.++|+|++++||++||+
T Consensus 92 ~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G~ 171 (473)
T 3rja_A 92 IDVISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADGR 171 (473)
T ss_dssp CCEEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSC
T ss_pred CceEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEecCCe
Confidence 99988899999999999999999999999999 88898888899999999999999999999999999999999999999
Q ss_pred EEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCC--HHHHHHHHHH
Q 008252 284 VVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPT--IKDAADVAIA 347 (572)
Q Consensus 284 i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~--~~~a~~~~~~ 347 (572)
+++++.. .++||||+++|++|+|||||+++|||+|.|+....+.+.++. .+++.+++.+
T Consensus 172 v~~~~~~-----~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (473)
T 3rja_A 172 IVEASAT-----ENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEA 232 (473)
T ss_dssp EEEEETT-----BSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHH
T ss_pred EEEeCCC-----CCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHH
Confidence 9988654 478999999999999999999999999999877666555543 3445555443
No 13
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=8.1e-35 Score=319.82 Aligned_cols=189 Identities=22% Similarity=0.305 Sum_probs=164.4
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCH
Q 008252 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (572)
Q Consensus 146 ~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~ 225 (572)
+.+..|.+||+|+|++||+++|++|+++++|+.++||||++.|.+...++|++|||++||+| ++|+++.+|+||||++|
T Consensus 51 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~ 129 (521)
T 2ipi_A 51 RFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQMRQV-FYDSGKRAFAVEPGATL 129 (521)
T ss_dssp TCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTTCCEEEECTTCCCE-EEETTTTEEEECTTSBH
T ss_pred cccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCCCeEEEecccCCCe-EEeCCCCEEEEeCCcCH
Confidence 34578999999999999999999999999999999999999887655567999999999999 68999999999999999
Q ss_pred HHHHHHHc-cCCCccCCCCCCcccccccccccccCCCccccccccceeeeEEEEeeC--CcEEEcccccccCcCCccchh
Q 008252 226 MELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN--GDVVKTASRARKSAAGYDLTR 302 (572)
Q Consensus 226 ~~L~~~L~-~~Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~d--G~i~~~~~~~~~~~~g~dl~~ 302 (572)
.+|+++|. ++|+.+|.+.++.++|||++++|++|.++++||.++|+|+++|||++| |++++......+...++||||
T Consensus 130 ~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~ 209 (521)
T 2ipi_A 130 GETYRALYLDWGVTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWW 209 (521)
T ss_dssp HHHHHHHHHHHSBCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHH
T ss_pred HHHHHHHHHhcCceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHH
Confidence 99999997 799999999988999999999999999999999999999999999987 997654332212334567999
Q ss_pred hhhcC-CCCeEEEEEEEEee-----------eccccc-eEEEEEec
Q 008252 303 LIIGS-EGTLGIITEVTLRL-----------QKIPQH-SVVATCNF 335 (572)
Q Consensus 303 ~~~Gs-~G~lGIIt~~tlkl-----------~p~p~~-~~~~~~~f 335 (572)
+++|+ +|+|||||+++||+ +|.|+. .....+.|
T Consensus 210 a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~ 255 (521)
T 2ipi_A 210 AHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTW 255 (521)
T ss_dssp HTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEE
T ss_pred HHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEe
Confidence 99985 79999999999999 998764 33334444
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.1e-35 Score=322.91 Aligned_cols=397 Identities=13% Similarity=0.183 Sum_probs=256.1
Q ss_pred cccCCCCCCEEEEcCCHHHHHHHHHHHHhC--CCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcC
Q 008252 144 FHKAVNIPDIIVFPRSEDEVSKIVKCCDKH--KVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEP 221 (572)
Q Consensus 144 ~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~--~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~a 221 (572)
+.+....|.+|++|+|++||+++|++|+++ ++|++++|+|||+.+.+.. ++|++|||++||+|+++|+++++|+|||
T Consensus 36 W~~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~-~~gvvIdl~~l~~i~~~d~~~~~v~v~a 114 (481)
T 4feh_A 36 WGRTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN-GGGLVIDMTPLNTIHSIDADTKLVDIDA 114 (481)
T ss_dssp TTCCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC-TTSEEEECTTCCCEEEEETTTTEEEEET
T ss_pred ccCCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC-cCeEEEECccCCCceEEcCCCCEEEEcC
Confidence 345567899999999999999999999999 7999999999999766653 5799999999999988999999999999
Q ss_pred CCCHHHHHHHHccCCCccCCCCCC-cccccccccccccCCCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccc
Q 008252 222 GIGWMELNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDL 300 (572)
Q Consensus 222 Gv~~~~L~~~L~~~Gl~l~~~~~~-~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl 300 (572)
|+++.+|+++|.++|+++|..++. .+||||++++|+||..+..||.++|+|+++++|++||++++++... .++||
T Consensus 115 Gv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~----~~~dL 190 (481)
T 4feh_A 115 GVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTG----EDAEL 190 (481)
T ss_dssp TCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSS----TTHHH
T ss_pred CccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCC----CChHH
Confidence 999999999999999999987765 5899999999999998899999999999999999999999986531 47899
Q ss_pred hhhhhcCCCCeEEEEEEEEeeeccccceE-EEEEecCCHHHHHHHHHHHHHcCCceeeeeeccHHH--------------
Q 008252 301 TRLIIGSEGTLGIITEVTLRLQKIPQHSV-VATCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQ-------------- 365 (572)
Q Consensus 301 ~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~-~~~~~f~~~~~a~~~~~~~~~~~~~~~~~e~~d~~~-------------- 365 (572)
|++++|++|++||||++|||++|.|+... .....+.+++++.+.+.+........ .+.++|...
T Consensus 191 f~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~w~d~~~~~~~~~r~~~~~~~ 269 (481)
T 4feh_A 191 FWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSEARYTY-SSAWFDAISAPPKLGRAAVSRGR 269 (481)
T ss_dssp HHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSSGGGGCSE-EEEEECCSSCTTSTTCEEEEEEE
T ss_pred HHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHHHhcCCcE-EEEEEeccCCCCCCCeEEEEeCC
Confidence 99999999999999999999999986544 34677899998888765332222111 222222100
Q ss_pred ---HHHH-HhhcCCCCC--CCCceEEEEecChhhHHH-HHHHHHHHh-hhcCcceEEEcCCHHHHHHHHHHH-HHHHHHH
Q 008252 366 ---VRAV-NIANGKNLP--ELPTLMFEFIGTQAYSHE-QTLIVQKIV-SEHNGTDFIFAEDPEAKKELWKMR-KEALWAC 436 (572)
Q Consensus 366 ---~~~~-~~~~~~~~~--~~~~l~~~~~g~~~~~~~-~~~~~~~i~-~~~~g~~~~~~~~~~~~~~lw~~R-~~~~~~~ 436 (572)
.... .......+. ..+.+.+...-+...... ....+.+.. ............ ...++.-. .-..|..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~d~v~~~nr 345 (481)
T 4feh_A 270 LATVEQLPAKLRSEPLKFDAPQLLTLPDVFPNGLANKYTFGPIGELWYRKSGTYRGKVQN----LTQFYHPLDMFGEWNR 345 (481)
T ss_dssp ECCGGGSCGGGGGSTTCCC-----------------------------CCSCCEEEEEEE----HHHHHC-------CHH
T ss_pred cCcccccccccccCccccccccccCCCccCcHHHHhHHHHHHHHHHHHhhCccccccccc----ceeeechhhhcccccc
Confidence 0000 000000000 000000000000000000 000011100 000000000000 01111101 1111222
Q ss_pred HhcCCCcceeeeeeeecchhHHHHHHHHHHHhccCCc--EEEEEEEecCCc----------eEEEEeeCCCCHHHHHHHH
Q 008252 437 FAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPL--ICTVIAHAGDGN----------FHTVILFDPSKEEDRQEAE 504 (572)
Q Consensus 437 ~~~~~~~~~~~~D~~vP~s~l~e~l~~~~~~~~~~~~--~~~~~gH~gdG~----------~h~~i~~~~~~~~~~~~~~ 504 (572)
.....+ ....+++||.+ ..+.++++.+.+.+.+. ...+....++++ .-+.+-|... + ..+
T Consensus 346 ~yg~~~--f~q~e~~vP~~-~~~al~~l~~~i~~~~~~~~~~v~~R~~~~d~~~LS~~~~~~tlal~~~~~-~----~~~ 417 (481)
T 4feh_A 346 AYGPAG--FLQYQFVIPTE-AVDEFKKIIGVIQASGHYSFLNVFKLFGPRNQAPLSFPIPGWNICVDFPIK-D----GLG 417 (481)
T ss_dssp HHTTTS--EEEEEEEEETT-CHHHHHHHHHHHHHTTCCCSCCEEEEECCCCSCTTCCCCSEEEEEEEEECC-T----THH
T ss_pred ccCCCC--cEEEEEEeccc-HHHHHHHHHHHHHhcCCCceEEEEEEEeCCCCccCCCCCCceEEEEEccCC-c----cHH
Confidence 222222 23558999999 99999999888776542 222333343221 1111112111 1 246
Q ss_pred HHHHHHHHHHHhcCCeEEeccccccccHHHHHHhhCHHHHHHHHHHHHhcCCCCCcc
Q 008252 505 RLNRFMVHTALSMEGTCTGEHGIGTGKMKYLEKELGTGALETMKRIKVALDPNNIMN 561 (572)
Q Consensus 505 ~~~~~l~~~~~~~gG~~s~ehGiG~~k~~~l~~~~g~~~~~~~~~lK~~~DP~gIlN 561 (572)
++.+.+.+.+.++||.+...+-.. ...+.+.+.| ..++.++++|+.+||+|+|.
T Consensus 418 ~~~~~le~i~~~~gGRphw~K~~~-~~~~~~~~~Y--P~~~~F~~lr~~~DP~g~F~ 471 (481)
T 4feh_A 418 KFVSELDRRVLEFGGRLYTAKDSR-TTAETFHAMY--PRVDEWISVRRKVDPLRVFA 471 (481)
T ss_dssp HHHHHHHHHHHHTTCEECGGGCSS-CCHHHHHHHC--TTHHHHHHHHHHHCTTCCBC
T ss_pred HHHHHHHHHHHHcCCEecchhccC-CCHHHHHHhC--cCHHHHHHHHHhhCCccccC
Confidence 788888889999999995433332 2345666666 37889999999999999885
No 15
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=3.1e-35 Score=322.03 Aligned_cols=221 Identities=18% Similarity=0.218 Sum_probs=181.4
Q ss_pred HHHHHhcCC---CeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCC-
Q 008252 117 DELKAICQD---DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS- 192 (572)
Q Consensus 117 ~~L~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~- 192 (572)
++|++.++. .+..+.+..|......++ .+.+..|.+||+|+|++||+++|++|+++++|++++|||||+.+.+.+
T Consensus 7 ~~l~~~l~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~ 85 (503)
T 1zr6_A 7 NSINACLAAADVEFHEEDSEGWDMDGTAFN-LRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGG 85 (503)
T ss_dssp CHHHHHHHHTTCEECCTTSHHHHHHTSCSB-GGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTTTS
T ss_pred HHHHHhhCcCCceecCCCccchHHHhhhhh-hcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccC
Confidence 456665552 334444444543222222 245679999999999999999999999999999999999999876654
Q ss_pred CCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccC-CCccCCCCCCcccccccccccccCCCccccccccce
Q 008252 193 PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPY-GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDN 271 (572)
Q Consensus 193 ~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~-Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~ 271 (572)
.++|++|||++||+| ++| ++++|+||||++|.+|+++|.++ |+.+|.+.++.+++||++.+||+|.++++||.++|+
T Consensus 86 ~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~ 163 (503)
T 1zr6_A 86 EDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDW 163 (503)
T ss_dssp SSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHHHHHHHHTTSEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGG
T ss_pred CCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeCCCCCCcCchhhhhcCCCCCcccccccChhhe
Confidence 467999999999999 688 88899999999999999999655 589998888889999999999999999999999999
Q ss_pred eeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecC-CHHHHHHHH
Q 008252 272 VINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFP-TIKDAADVA 345 (572)
Q Consensus 272 v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~-~~~~a~~~~ 345 (572)
|++++||++||++++++.. .++||||+++|++|+|||||+++||++|.|+....+.+.|+ +.+++.+++
T Consensus 164 v~~~~vV~a~G~i~~~~~~-----~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (503)
T 1zr6_A 164 LIGATVVLADASIVHVSET-----ENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGL 233 (503)
T ss_dssp EEEEEEECTTSCEEEEBTT-----BSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHH
T ss_pred EEEEEEEecCCCEEEeCCC-----CCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHH
Confidence 9999999999999987653 47899999999999999999999999999986655555553 234444443
No 16
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.3e-35 Score=321.13 Aligned_cols=194 Identities=26% Similarity=0.357 Sum_probs=173.5
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCC-CCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHH
Q 008252 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSP-NGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (572)
Q Consensus 148 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~-~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~ 226 (572)
...|.+|++|+|++||+++|++|+++++||+++|||||+.|.++.. ++|++|||++||+| ++|+++.+++||||+++.
T Consensus 43 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~ 121 (495)
T 3fw9_A 43 ISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWVESGSTLG 121 (495)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEEETTCBHH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHH
Confidence 3589999999999999999999999999999999999999888764 46899999999999 699999999999999999
Q ss_pred HHHHHHccC--CCccCCCCCCcccccccccccccCCCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhh
Q 008252 227 ELNEYLEPY--GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLI 304 (572)
Q Consensus 227 ~L~~~L~~~--Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~ 304 (572)
+|+++|.++ |+.+|.+.++.++|||++++|++|..+++||.++|+|++++||++||++++. . ..++||||++
T Consensus 122 ~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~-~-----~~~~DLf~a~ 195 (495)
T 3fw9_A 122 ELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDR-Q-----AMGEDVFWAI 195 (495)
T ss_dssp HHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECH-H-----HHCHHHHHHH
T ss_pred HHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEEc-C-----CCChhhhhhh
Confidence 999999998 7889988888899999999999999999999999999999999999999861 1 2478999999
Q ss_pred hc-CCCCeEEEEEEEEeeeccccceEEEEEecC-CHHHHHHHHHHH
Q 008252 305 IG-SEGTLGIITEVTLRLQKIPQHSVVATCNFP-TIKDAADVAIAT 348 (572)
Q Consensus 305 ~G-s~G~lGIIt~~tlkl~p~p~~~~~~~~~f~-~~~~a~~~~~~~ 348 (572)
+| ++|+|||||+++|||+|.|+....+.+.++ +.+++.+++..+
T Consensus 196 rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~ 241 (495)
T 3fw9_A 196 RGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKW 241 (495)
T ss_dssp TTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHH
T ss_pred hcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHH
Confidence 98 789999999999999999998777666664 346666665544
No 17
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=5.4e-35 Score=318.94 Aligned_cols=212 Identities=18% Similarity=0.248 Sum_probs=172.4
Q ss_pred HhcCCCeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEE
Q 008252 121 AICQDDMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCID 200 (572)
Q Consensus 121 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvId 200 (572)
.-+...+.++.+..|......++ .++...|.+||+|+|++||+++|++|+++++||+++||||++.|.+...++|++||
T Consensus 6 ~s~~~~~~~p~~~~y~~~~~~~n-~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~gvvId 84 (501)
T 3pop_A 6 ASVPPFTVGREDPRYIELSHSDN-HRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLVLD 84 (501)
T ss_dssp ---CCEEEETTSTTHHHHTCCSC-TTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSCCSEEEE
T ss_pred ccCCCceECCCCcchHHHHHHHh-hccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCCCEEEEE
Confidence 33445566665555542221111 24457999999999999999999999999999999999999998877667899999
Q ss_pred cCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHc-cCCCccCCCCCCcccccccccccccCCCccccccccceeeeEEEEe
Q 008252 201 LSLMKSVKALHIEDMDVVVEPGIGWMELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVL 279 (572)
Q Consensus 201 l~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~-~~Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~ 279 (572)
|++||+| ++|+++.+++||||++|.+|+++|. ++|+.+|.+.++.++|||++++|++|..+++||.++|+|+++|||+
T Consensus 85 l~~l~~i-~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV~ 163 (501)
T 3pop_A 85 LHNLHAI-GPAADGAGVRVGSGATVDQVQKALFRRWNAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAV 163 (501)
T ss_dssp CTTCCCE-EECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEEE
T ss_pred ecccCCe-EEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEEEE
Confidence 9999998 5899999999999999999999996 5799999988888999999999999999999999999999999999
Q ss_pred --eCCc--EEEcccccccCcCCccchhhhhcC-CCCeEEEEEEEEee----------ecccc-ceEEEEEecC
Q 008252 280 --ANGD--VVKTASRARKSAAGYDLTRLIIGS-EGTLGIITEVTLRL----------QKIPQ-HSVVATCNFP 336 (572)
Q Consensus 280 --~dG~--i~~~~~~~~~~~~g~dl~~~~~Gs-~G~lGIIt~~tlkl----------~p~p~-~~~~~~~~f~ 336 (572)
+||+ +++.... ....++||||+++|+ +|+|||||+++||+ +|.++ ......+.|+
T Consensus 164 ~da~G~~~~v~~~~~--~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~ 234 (501)
T 3pop_A 164 VDESRTVRLVTARAD--DTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFP 234 (501)
T ss_dssp ECTTSCEEEEEEETT--CCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEE
T ss_pred ecCCCCEEEEEeccC--CCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEc
Confidence 8999 4544211 112468999999998 79999999999999 66544 3344445554
No 18
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.5e-34 Score=315.88 Aligned_cols=189 Identities=23% Similarity=0.320 Sum_probs=165.6
Q ss_pred CCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHH
Q 008252 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (572)
Q Consensus 147 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~ 226 (572)
.+..|.+||+|+|++||+++|++|+++++|+.++||||++.|.+...++|++|||++||+| ++|+++.+|+||||++|.
T Consensus 54 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m~~i-~~d~~~~~v~v~aG~~~~ 132 (523)
T 2wdx_A 54 FNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI-AYDPSMNAFLIEPGNTLS 132 (523)
T ss_dssp CCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTTCCEEEECTTCCCE-EEETTTTEEEECTTCBHH
T ss_pred ccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCCCeEEEEcccCCCE-EEcCCCCEEEEcCCCCHH
Confidence 3568999999999999999999999999999999999999887766567999999999999 689999999999999999
Q ss_pred HHHHHHc-cCCCccCCCCCCcccccccccccccCCCccccccccceeeeEEEEeeC--CcEEEcccccccCcCCccchhh
Q 008252 227 ELNEYLE-PYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLAN--GDVVKTASRARKSAAGYDLTRL 303 (572)
Q Consensus 227 ~L~~~L~-~~Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~d--G~i~~~~~~~~~~~~g~dl~~~ 303 (572)
+|+++|. ++|+.++.+.++.++|||++++|++|.++++||.++|+|+++|||++| |+++++.....+...++||||+
T Consensus 133 ~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a 212 (523)
T 2wdx_A 133 EVYEKLYLGWNVTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWA 212 (523)
T ss_dssp HHHHHHHHHHSCCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHH
T ss_pred HHHHHHHHhcCeEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHH
Confidence 9999998 599999998888899999999999999999999999999999999965 9986553222223345779999
Q ss_pred hhc-CCCCeEEEEEEEEee-----------eccccc-eEEEEEecC
Q 008252 304 IIG-SEGTLGIITEVTLRL-----------QKIPQH-SVVATCNFP 336 (572)
Q Consensus 304 ~~G-s~G~lGIIt~~tlkl-----------~p~p~~-~~~~~~~f~ 336 (572)
++| ++|+|||||+++||+ +|.|+. .....+.|+
T Consensus 213 ~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 213 HTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp TTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred hhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 996 479999999999999 998764 445566665
No 19
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=8.3e-35 Score=319.97 Aligned_cols=189 Identities=21% Similarity=0.276 Sum_probs=161.9
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCH
Q 008252 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (572)
Q Consensus 146 ~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~ 225 (572)
+++..|.+||+|+|++||+++|++|+++++||+++||||++.|.+...++|++|||++||+| ++|+++.+|+||||++|
T Consensus 54 ~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~ 132 (530)
T 2y3s_A 54 RFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAV-GFDEERGAFAVEAGATL 132 (530)
T ss_dssp TCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTTCCEEEECTTCCCE-EEETTTTEEEEETTCBH
T ss_pred hccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCCCeEEEEcccCCCE-EEcCCCCEEEEeCCCCH
Confidence 44678999999999999999999999999999999999999887665567999999999999 68999999999999999
Q ss_pred HHHHHHHcc-CCCccCCCCCCcccccccccccccCCCccccccccceeeeEEEEee--CCcEEEcccccccCcCCccchh
Q 008252 226 MELNEYLEP-YGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLA--NGDVVKTASRARKSAAGYDLTR 302 (572)
Q Consensus 226 ~~L~~~L~~-~Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~--dG~i~~~~~~~~~~~~g~dl~~ 302 (572)
.+|+++|.+ +|+.++.+.++.++|||++++|++|.++++||.++|+|++++||++ ||+++++.........++||||
T Consensus 133 ~~l~~~l~~~~Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~ 212 (530)
T 2y3s_A 133 GAVYKTLFRVWGVTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWW 212 (530)
T ss_dssp HHHHHHHHHHHSCCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHH
T ss_pred HHHHHHHHhhcCeEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHH
Confidence 999999985 9999998888889999999999999999999999999999999995 4998544211100112345999
Q ss_pred hhhcC-CCCeEEEEEEEEee------------ecccc-ceEEEEEec
Q 008252 303 LIIGS-EGTLGIITEVTLRL------------QKIPQ-HSVVATCNF 335 (572)
Q Consensus 303 ~~~Gs-~G~lGIIt~~tlkl------------~p~p~-~~~~~~~~f 335 (572)
+++|+ +|+|||||+++||+ +|.|+ ......+.|
T Consensus 213 a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 259 (530)
T 2y3s_A 213 AHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVW 259 (530)
T ss_dssp HTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEE
T ss_pred HHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEe
Confidence 99986 69999999999999 88875 344444445
No 20
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=7.2e-35 Score=318.14 Aligned_cols=195 Identities=24% Similarity=0.352 Sum_probs=171.0
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCC-CCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHH
Q 008252 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLS-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (572)
Q Consensus 148 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~-~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~ 226 (572)
...|.+||+|+|++||+++|++|+++++|+.++|||||+.|.+.. ..+|++|||++||+| ++|+++.+++||||++|.
T Consensus 51 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~ 129 (518)
T 3vte_A 51 TPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLG 129 (518)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEETTCBHH
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEeCCccHH
Confidence 468999999999999999999999999999999999999887753 357999999999999 589999999999999999
Q ss_pred HHHHHHccC--CCccCCCCCCcccccccccccccCCCccccccccceeeeEEEEeeCCcEEEcccccccCcCCccchhhh
Q 008252 227 ELNEYLEPY--GLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLI 304 (572)
Q Consensus 227 ~L~~~L~~~--Gl~l~~~~~~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~ 304 (572)
+|+++|.++ |+.++.+.++.++|||++++|++|..+++||.++|+|++++||++||++++.. ..++||||++
T Consensus 130 ~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~------~~~~DLf~a~ 203 (518)
T 3vte_A 130 EVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRK------SMGEDLFWAI 203 (518)
T ss_dssp HHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHH------HHCHHHHHHH
T ss_pred HHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEee------ccccchhhhe
Confidence 999999886 56778788888999999999999999999999999999999999999998531 1368999999
Q ss_pred hcC-CCCeEEEEEEEEeeeccccceEEEEEecC-CHHHHHHHHHHHH
Q 008252 305 IGS-EGTLGIITEVTLRLQKIPQHSVVATCNFP-TIKDAADVAIATM 349 (572)
Q Consensus 305 ~Gs-~G~lGIIt~~tlkl~p~p~~~~~~~~~f~-~~~~a~~~~~~~~ 349 (572)
+|+ +|+|||||+++|||+|.|+....+.+.+. +.+++.+++.++.
T Consensus 204 rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~ 250 (518)
T 3vte_A 204 RGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQ 250 (518)
T ss_dssp TTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHH
T ss_pred ecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence 998 89999999999999999987666555543 4466666665543
No 21
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.97 E-value=7.2e-30 Score=282.70 Aligned_cols=188 Identities=18% Similarity=0.274 Sum_probs=159.6
Q ss_pred cCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCC----CCcEEEEc-CCCCCcEEecc--CCCeEE
Q 008252 146 KAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSP----NGGVCIDL-SLMKSVKALHI--EDMDVV 218 (572)
Q Consensus 146 ~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~----~~gvvIdl-~~mn~i~~~~~--~~~~v~ 218 (572)
++...|.+|++|+|++||+++|++|+++++|++++|+|||+.+.++.. .+|++||| ++||+| ++|+ ++.+|+
T Consensus 31 ~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~ 109 (561)
T 2i0k_A 31 EIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVT 109 (561)
T ss_dssp SSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEE
T ss_pred ccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEE
Confidence 344689999999999999999999999999999999999987644432 35899999 899998 7998 788999
Q ss_pred EcCCCCHHHHHHHHccCCCccCCCCCCc-ccccccccccccCCC----------ccccccccceeeeEEEEeeCCc---E
Q 008252 219 VEPGIGWMELNEYLEPYGLFFPLDPGPG-ATIGGMCATRCSGSL----------AVRYGTMRDNVINLKVVLANGD---V 284 (572)
Q Consensus 219 v~aGv~~~~L~~~L~~~Gl~l~~~~~~~-~tvGG~v~~~~~G~~----------~~~yG~~~D~v~~~~vV~~dG~---i 284 (572)
||||+++.+|+++|.++|+.+|+.++++ +||||++++|++|.. +.+||.++|+|+++++|++||+ +
T Consensus 110 v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV~~dG~~~~~ 189 (561)
T 2i0k_A 110 AGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNGTTYAL 189 (561)
T ss_dssp EETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECSSSEEE
T ss_pred EcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEEeCCCCEEEe
Confidence 9999999999999999999999988875 999999999999986 6789999999999999999999 6
Q ss_pred EEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCCHHHHHH
Q 008252 285 VKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAAD 343 (572)
Q Consensus 285 ~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~~~a~~ 343 (572)
+++... +.||+++++|. |. ||||++|||+.|.|+........++ .+++++
T Consensus 190 ~~~~~~------~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~~~-~~~~l~ 239 (561)
T 2i0k_A 190 ETYQRN------DPRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTDIP-WRELFA 239 (561)
T ss_dssp EEEETT------SGGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECCSC-HHHHTC
T ss_pred eeccCC------CccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEccC-HHHHHH
Confidence 655332 46898888744 55 8999999999999876655544344 555443
No 22
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.97 E-value=1.6e-29 Score=274.96 Aligned_cols=186 Identities=21% Similarity=0.230 Sum_probs=154.7
Q ss_pred CCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-----CCCCCCCCcEEEEcC-CCCCcEEeccC--CCeEE
Q 008252 147 AVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE-----GHTLSPNGGVCIDLS-LMKSVKALHIE--DMDVV 218 (572)
Q Consensus 147 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~-----g~~~~~~~gvvIdl~-~mn~i~~~~~~--~~~v~ 218 (572)
++..|.+|++|+|++||+++|++|+++++||+++|+|||+. ++. +.++|++|||+ +||+| ++|++ ..+|+
T Consensus 26 ~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~-~~~~GVvIdls~~Ln~I-~vD~~~~~~tVt 103 (540)
T 3js8_A 26 IKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGV-SCPAVVLLDTTRYLTAM-SIDASGPVAKVT 103 (540)
T ss_dssp CEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTC-SSCSEEEEETTTTCCCE-EEECSSSSEEEE
T ss_pred cCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCC-CCCCeEEEECcCcCCCE-EECCCCCccEEE
Confidence 45689999999999999999999999999999999999995 333 34678999995 79999 78875 57999
Q ss_pred EcCCCCHHHHHHHHccCCCccCCCCCC-cccccccccccccCCC----------ccccccccceeeeEEEEeeCCc----
Q 008252 219 VEPGIGWMELNEYLEPYGLFFPLDPGP-GATIGGMCATRCSGSL----------AVRYGTMRDNVINLKVVLANGD---- 283 (572)
Q Consensus 219 v~aGv~~~~L~~~L~~~Gl~l~~~~~~-~~tvGG~v~~~~~G~~----------~~~yG~~~D~v~~~~vV~~dG~---- 283 (572)
||||+++.+|+++|.++|+.++.++++ .+||||++++|+||.. +.+||.++|+|++++||++||+
T Consensus 104 V~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG~~~~~ 183 (540)
T 3js8_A 104 AQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDKASGAY 183 (540)
T ss_dssp EETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEETTTTEE
T ss_pred EccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCCCCcee
Confidence 999999999999999999999987776 4999999999999985 4799999999999999999999
Q ss_pred -EEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCCHHHHHH
Q 008252 284 -VVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAAD 343 (572)
Q Consensus 284 -i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~~~a~~ 343 (572)
++++.. .++||+++..|. |+ ||||++|||++|.+.-..... ..-+.++.++
T Consensus 184 ~i~~~s~------~~~DL~a~r~G~-G~-gIVTevtlrl~P~~~l~~~~~-~~~~~~e~l~ 235 (540)
T 3js8_A 184 ALRKFAR------NDPQIAPLLAHV-GR-SLIVEATLQAAPNQRLRCQSW-FNIPYGEMFA 235 (540)
T ss_dssp EEEEEET------TSGGGHHHHTCT-TS-SCEEEEEEEEEECCEEEEEEE-CCSCHHHHTC
T ss_pred eEEEeCC------CChhHHHHHhcC-CC-eEEEEEEEEEEECCceEEEEE-ecCCHHHHHh
Confidence 665432 368997666554 76 599999999999876443211 1235666554
No 23
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.97 E-value=4.2e-33 Score=288.55 Aligned_cols=281 Identities=16% Similarity=0.230 Sum_probs=196.4
Q ss_pred CCCcHHHHHHHHHhcCC-CeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 008252 109 KEIPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIE 187 (572)
Q Consensus 109 ~~~~~~~~~~L~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~ 187 (572)
..++.+++++|++++|. ++.+ ......|. + +++++.|.+|++|+|++||++++++|+++++|++|+|||||+.
T Consensus 12 ~~~~~~~~~~l~~~l~~~~v~~-~~~l~~~~----t-~~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~ 85 (326)
T 1hsk_A 12 DPINKDIYQALQQLIPNEKIKV-DEPLKRYT----Y-TKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNII 85 (326)
T ss_dssp ---CHHHHHHHHHHSCGGGEEE-EEEGGGTC----T-TSCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEE
T ss_pred CcchHHHHHHHHHhcCccceec-CcchHHhc----c-CCcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccc
Confidence 34678899999999985 6655 33332232 2 2466789999999999999999999999999999999999997
Q ss_pred CCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCc-cCCCCCCcccccccccccccCCCccccc
Q 008252 188 GHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYG 266 (572)
Q Consensus 188 g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~-l~~~~~~~~tvGG~v~~~~~G~~~~~yG 266 (572)
+...+. +|++|||++||+| ++| +.+++||||++|.+|+++|.++|+. ++..++.++||||++++|++| ||
T Consensus 86 ~~~~~~-~gvvI~l~~m~~i-~id--~~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~PgtvGG~i~~nagg-----yG 156 (326)
T 1hsk_A 86 IREGGI-RGIVISLLSLDHI-EVS--DDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGA-----YG 156 (326)
T ss_dssp ECTTCE-EEEEEECTTCCCE-EEE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TT
T ss_pred cCCCCC-CeEEEEeCCCCce-EEc--CCEEEEeCCCcHHHHHHHHHHCCCccccccCCCcchhhHHHhccccc-----Cc
Confidence 655433 5899999999999 676 4789999999999999999999993 333344456999999999655 89
Q ss_pred -cccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeecc-ccceEEEEEecCCHHHHHHH
Q 008252 267 -TMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI-PQHSVVATCNFPTIKDAADV 344 (572)
Q Consensus 267 -~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~-p~~~~~~~~~f~~~~~a~~~ 344 (572)
.++|+|+++++|++||++++++.. +..+||++..+. ++| ||||+++||++|. |+.....+..|++..++.+.
T Consensus 157 ~~~~d~v~~v~vv~~~G~i~~~~~~--~~~~gyr~~~l~--s~g--gIIt~~~l~l~p~~p~~~~~~~~~~~~~~~a~~p 230 (326)
T 1hsk_A 157 GEVKDCIDYALCVNEQGSLIKLTTK--ELELDYRNSIIQ--KEH--LVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQP 230 (326)
T ss_dssp EEHHHHEEEEEEECTTSCEEEEETT--TTTCBTTBCHHH--HTT--CEEEEEEEECEECCHHHHHHHHHHHHHHHHHHSC
T ss_pred hhhhhhEEEEEEEeCCCCEEEEChH--HcCCCccccccC--CCC--EEEEEEEEEEEcCCHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999988765 566788887654 456 9999999999998 54432222222222221110
Q ss_pred HH-----HHHHcCCceeeeeeccHHHHHHHHhhcCCCCC-CCCceEEEEec-ChhhHHHHHHHHHHHhhhcCcc
Q 008252 345 AI-----ATMLSGIQVSRVELLDEVQVRAVNIANGKNLP-ELPTLMFEFIG-TQAYSHEQTLIVQKIVSEHNGT 411 (572)
Q Consensus 345 ~~-----~~~~~~~~~~~~e~~d~~~~~~~~~~~~~~~~-~~~~l~~~~~g-~~~~~~~~~~~~~~i~~~~~g~ 411 (572)
+. .++.+...+.+.|++|...++.... .+..++ ....+++++.| +..++.+..+.+++.+.+..+.
T Consensus 231 ~~~~s~gs~fk~p~~~~a~elid~~glkg~~~-g~a~v~~~~a~~lvn~~ga~~~~v~~~~~~v~~~v~~~~gi 303 (326)
T 1hsk_A 231 LEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRI-GGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGI 303 (326)
T ss_dssp TTSCEECCCBCCCTTSCHHHHHHHTTCTTCEE-TTEEECSSCTTCEEECSSCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCcEEEeeeCCCcchHHHHHHHhccCCEEe-CCeeecccccEEEEECCCCCHHHHHHHHHHHHHHHHHhhCC
Confidence 00 0111112234455555433222111 111122 23468889888 5667777777777777665554
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.94 E-value=2.1e-27 Score=244.46 Aligned_cols=195 Identities=17% Similarity=0.309 Sum_probs=153.4
Q ss_pred CcHHHHHHHHHhcCC-CeeeChhhhhhccCCCCccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Q 008252 111 IPQELVDELKAICQD-DMTMDYEERYIHGKPQNSFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH 189 (572)
Q Consensus 111 ~~~~~~~~L~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~ 189 (572)
|+++++++|+++++. ++..+ .....| + ++++++.|++++.|+|++||+++|++|+++++|++++|+|||+.+.
T Consensus 20 ~~~~~~~~L~~~lg~~~v~~~-~~l~~~----t-t~~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~ 93 (322)
T 3tx1_A 20 FQSNAMNNLQTKFPHIAIKLN-EPLSKY----T-YTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIK 93 (322)
T ss_dssp -----CCCHHHHCTTSEEEEE-EEGGGG----S-TTSCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEEC
T ss_pred cCHHHHHHHHHhcCCcceEcC-cchHHh----c-cCCcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcC
Confidence 556778899999986 46655 332223 2 2477889999999999999999999999999999999999998643
Q ss_pred CCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHHHHHHccCCCc-cCCCCCCcccccccccccccCCCcccc-cc
Q 008252 190 TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRY-GT 267 (572)
Q Consensus 190 ~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~-l~~~~~~~~tvGG~v~~~~~G~~~~~y-G~ 267 (572)
... .+|++|||++||+|. +| +.+++|+||++|.+|++++.++|+. +++..++++||||++++|++| | |.
T Consensus 94 ~~~-~~gvvI~l~~~~~I~-~d--~~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGg-----yGg~ 164 (322)
T 3tx1_A 94 DGG-IRGVILHLDLLQTIE-RN--NTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGA-----YGGE 164 (322)
T ss_dssp TTC-EEEEEEECTTCCCEE-EE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TTEE
T ss_pred CCC-CCeEEEECCCCCcEE-EC--CCEEEEecCcCHHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccC-----cccc
Confidence 221 258999999999986 54 5699999999999999999999996 666667789999999999655 6 67
Q ss_pred ccceeeeEEEEeeCCcEEEcccccccCcCCccchhhhhcCCCCeEEEEEEEEeeecccc
Q 008252 268 MRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ 326 (572)
Q Consensus 268 ~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~ 326 (572)
++|+|+++++|++||+++++... ..+|++...+.|+++ ||||+++|||.|.|.
T Consensus 165 ~~d~v~~vevV~~~G~i~~~~~~----~~~~~yR~s~~g~~~--~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 165 ISDVLEAATVLTQTGELKKLKRS----ELKAAYRFSTIAEKN--YIVLDATFSLALEEK 217 (322)
T ss_dssp HHHHEEEEEEECTTSCEEEEEGG----GCC--CC-CTTTGGG--CEEEEEEEECEECCH
T ss_pred hHhhEEEEEEEcCCCCEEEechH----HcCcchhhcccCCCC--EEEEEEEEEEEeCCH
Confidence 99999999999999999987543 245555555555444 799999999999875
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.93 E-value=2.9e-25 Score=230.95 Aligned_cols=173 Identities=14% Similarity=0.133 Sum_probs=147.1
Q ss_pred ccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEec--cCCCeEEEc
Q 008252 143 SFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALH--IEDMDVVVE 220 (572)
Q Consensus 143 ~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~--~~~~~v~v~ 220 (572)
+++++++.|++++.|+|++||+++|++|+++++|++++|+|||+.+... .+|++|+++ |++|. ++ .++.+++|+
T Consensus 23 tt~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~--~~GvVI~l~-~~~i~-v~~~~~~~~v~v~ 98 (357)
T 3i99_A 23 HTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH--YTGMIVVNR-LNGIE-HQQDDDYHRLHVA 98 (357)
T ss_dssp STTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC--EEEEEEEEC-CCCEE-EEECSSEEEEEEE
T ss_pred ccCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC--CCeEEEEcC-CCceE-EeccCCceEEEEe
Confidence 4558889999999999999999999999999999999999999854332 358999998 99985 44 345689999
Q ss_pred CCCCHHHHHHHHccCCCc-cCCCCCCcccccccccccccCCCcccccc-ccceeeeEEEEee-CCcEEEcccccccCcCC
Q 008252 221 PGIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-MRDNVINLKVVLA-NGDVVKTASRARKSAAG 297 (572)
Q Consensus 221 aGv~~~~L~~~L~~~Gl~-l~~~~~~~~tvGG~v~~~~~G~~~~~yG~-~~D~v~~~~vV~~-dG~i~~~~~~~~~~~~g 297 (572)
||++|.+|.+++.++||. +++..++++||||++.+| ++.||. ++|+|+++++|++ ||++++.... ...++
T Consensus 99 AG~~~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~N-----aGaYG~e~~d~v~~vevv~~~~G~i~~~~~~--dl~f~ 171 (357)
T 3i99_A 99 GGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQN-----IGAYGVEFKDVCDYVEYLCLETGTVKRLTME--ECQFG 171 (357)
T ss_dssp TTSBHHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG--GGCCB
T ss_pred CCCcHHHHHHHHHHcCCcCccccCCCCchhHHHHHhc-----hhhhhhhHHhhEeEEEEEECCCCcEEEEeHH--HcCcc
Confidence 999999999999999998 888888889999999999 668997 9999999999999 9999988654 34455
Q ss_pred ccchhhhhcCCCCeEEEEEEEEeeeccccc
Q 008252 298 YDLTRLIIGSEGTLGIITEVTLRLQKIPQH 327 (572)
Q Consensus 298 ~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~ 327 (572)
|+... +.+++|++||||+++|||.|.+..
T Consensus 172 YR~s~-~~~~~g~~gIIt~v~f~L~p~~~~ 200 (357)
T 3i99_A 172 YRDSI-FKHQLYQKAVVTAVGLKFAKAWQP 200 (357)
T ss_dssp TTBCG-GGTTTTTTEEEEEEEEEEESSCCC
T ss_pred ccccc-CCCccCCCEEEEEEEEEEEeCCcc
Confidence 65532 344567999999999999998753
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.92 E-value=7e-25 Score=227.37 Aligned_cols=173 Identities=17% Similarity=0.154 Sum_probs=148.6
Q ss_pred ccccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCC-CeEEEcC
Q 008252 143 SFHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIED-MDVVVEP 221 (572)
Q Consensus 143 ~~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~-~~v~v~a 221 (572)
+++++++.|++++.|+|++||++++++|+++++|++++|||||+.+... .+|++|+|+ |++|..++.++ .+++|+|
T Consensus 7 tt~~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vgA 83 (340)
T 1uxy_A 7 NTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVGA 83 (340)
T ss_dssp STTCCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEET
T ss_pred ccCCCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEec
Confidence 4458889999999999999999999999999999999999999854432 258999996 99998777666 6899999
Q ss_pred CCCHHHHHHHHccCCCc-cCCCCCCcccccccccccccCCCcccccc-ccceeeeEEEEee-CCcEEEcccccccCcCCc
Q 008252 222 GIGWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYGT-MRDNVINLKVVLA-NGDVVKTASRARKSAAGY 298 (572)
Q Consensus 222 Gv~~~~L~~~L~~~Gl~-l~~~~~~~~tvGG~v~~~~~G~~~~~yG~-~~D~v~~~~vV~~-dG~i~~~~~~~~~~~~g~ 298 (572)
|++|.+|.+++.++||. ++...++++||||++.+| ++.||. ++|+|.++++|++ ||+++++... +..++|
T Consensus 84 G~~~~~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~N-----aGayG~ei~d~v~~v~vv~~~~G~v~~~~~~--d~~~gY 156 (340)
T 1uxy_A 84 GENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQN-----IGAYGVELQRVCAYVDSVELATGKQVRLTAK--ECRFGY 156 (340)
T ss_dssp TSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG--GGTCBT
T ss_pred CCCHHHHHHHHHHCCCCccccccCCccchhHHHHhc-----cccchhhHHhheeEEEEEECCCCcEEEEeHH--Hhcccc
Confidence 99999999999999996 777888889999999999 566996 9999999999996 9999988654 445667
Q ss_pred cchhhhhcCCCCeEEEEEEEEeeecccc
Q 008252 299 DLTRLIIGSEGTLGIITEVTLRLQKIPQ 326 (572)
Q Consensus 299 dl~~~~~Gs~G~lGIIt~~tlkl~p~p~ 326 (572)
+.. .+.++++++||||+++||+.|.|.
T Consensus 157 R~s-~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 157 RDS-IFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TBC-GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CcC-ccCCcCCCCEEEEEEEEEEEcCCC
Confidence 664 334556789999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.89 E-value=2.9e-23 Score=208.07 Aligned_cols=156 Identities=18% Similarity=0.158 Sum_probs=130.4
Q ss_pred cccCCCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCC
Q 008252 144 FHKAVNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGI 223 (572)
Q Consensus 144 ~~~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv 223 (572)
+++++++|+ +++|+|++||+++| ++|++++|+|||+.+...+.++|++|++++||+|. +| + +|+||+
T Consensus 16 t~~igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I~-vd--~---~v~aG~ 82 (268)
T 2gqt_A 16 TLGVGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYD-LK--G---WVGAGT 82 (268)
T ss_dssp SSCCCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCBC-TT--S---EEETTS
T ss_pred ccccCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCcE-Ec--C---EEECCC
Confidence 358888899 99999999999999 89999999999997554444459999999999985 54 2 999999
Q ss_pred CHHHHHHHHccCCCc-cCCCCCCcccccccccccccCCCccccc-cccceeeeEEEEeeCCcEEEcccccccCcCCccch
Q 008252 224 GWMELNEYLEPYGLF-FPLDPGPGATIGGMCATRCSGSLAVRYG-TMRDNVINLKVVLANGDVVKTASRARKSAAGYDLT 301 (572)
Q Consensus 224 ~~~~L~~~L~~~Gl~-l~~~~~~~~tvGG~v~~~~~G~~~~~yG-~~~D~v~~~~vV~~dG~i~~~~~~~~~~~~g~dl~ 301 (572)
+|.+|.+++.++||. +++..++++||||++.+| ++.|| .++|+|+++++| +||+++++... +..++|+..
T Consensus 83 ~~~~l~~~~~~~Gl~Gle~~~giPGtvGGav~~N-----aGayG~e~~d~v~~v~vv-~~G~v~~~~~~--~l~~~YR~s 154 (268)
T 2gqt_A 83 LLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMN-----AGTRFGEMADALEAVEVF-HDGAFHVYCPE--ELGFGYRKS 154 (268)
T ss_dssp BHHHHHHHHHHTTEESCGGGTTCCCBHHHHHHTT-----CEETTEEGGGGEEEEEEE-ETTEEEEECGG--GSCCBTTBC
T ss_pred CHHHHHHHHHHcCCcCCccccCccchhHHHHHhc-----cccCchhHHhheeEEEEE-CCCcEEEEchH--HcccccCCC
Confidence 999999999999997 777777889999999999 56799 599999999999 99999988653 344555554
Q ss_pred hhhhcCCCCeEEEEEEEEeeeccc
Q 008252 302 RLIIGSEGTLGIITEVTLRLQKIP 325 (572)
Q Consensus 302 ~~~~Gs~G~lGIIt~~tlkl~p~p 325 (572)
. +. .+| |||+++|||.|.+
T Consensus 155 ~-~~-~~g---IVt~~~~~L~~~~ 173 (268)
T 2gqt_A 155 H-LP-PGG---IVTRVRLKLKERP 173 (268)
T ss_dssp C-CS-TTC---EEEEEEECCEECC
T ss_pred C-cC-CCc---eEEEEEEEEEeCC
Confidence 2 21 223 9999999999874
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.86 E-value=7.7e-22 Score=192.25 Aligned_cols=126 Identities=27% Similarity=0.356 Sum_probs=113.2
Q ss_pred EeccCCCeEEEcCCCCHHHHHHHHccCCCccCCCCC-CcccccccccccccCCCccccccccceeeeEEEEeeCCcEEEc
Q 008252 209 ALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPG-PGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKT 287 (572)
Q Consensus 209 ~~~~~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~-~~~tvGG~v~~~~~G~~~~~yG~~~D~v~~~~vV~~dG~i~~~ 287 (572)
++|+++.+|+||||+++.+|+++|.++|+++|..|+ .+.||||++++|++| .+||.. |+|++++||++||+++++
T Consensus 2 ~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~~~ 77 (219)
T 2yvs_A 2 EVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRVRA 77 (219)
T ss_dssp EEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEEEE
T ss_pred eEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEEEE
Confidence 578999999999999999999999999999998776 345999999999988 799999 999999999999999998
Q ss_pred ccccccCcCCccchhhhhcCCCCeEEEEEEEEeeeccccceEEEEEecCCH
Q 008252 288 ASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTI 338 (572)
Q Consensus 288 ~~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~p~~~~~~~~~f~~~ 338 (572)
+....++..|||++++++|++|+|||||+++||++|.|+......+.+.+.
T Consensus 78 ~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~~ 128 (219)
T 2yvs_A 78 GGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGSF 128 (219)
T ss_dssp ECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSSC
T ss_pred CCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCCH
Confidence 876556778999999999999999999999999999998877766666554
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.29 E-value=8.4e-07 Score=89.67 Aligned_cols=151 Identities=18% Similarity=0.083 Sum_probs=96.7
Q ss_pred CCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC--CCCCCCcEEEEcCC---CCCcEEeccCCCeEEEcCCCCH
Q 008252 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSL---MKSVKALHIEDMDVVVEPGIGW 225 (572)
Q Consensus 151 p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~--~~~~~~gvvIdl~~---mn~i~~~~~~~~~v~v~aGv~~ 225 (572)
+-.++.|+|.+|+.++++.. +.+..+.||||++.-. .-....+++||+++ |+.|. .+++.+++++|+++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~---~~~~~l~iGA~~tl 78 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIR---EEGSTVVIGAMTVE 78 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEE---EETTEEEEETTCBH
T ss_pred cceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceE---ecCCEEEEccCCcH
Confidence 44688999999999998753 3578999999996210 00012479999985 56654 35567999999999
Q ss_pred HHHHHH-HccCCCc-----cCCCCCC----cccccccccccccCCCccccccccceee-------eEEEEeeCCcEEEcc
Q 008252 226 MELNEY-LEPYGLF-----FPLDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGDVVKTA 288 (572)
Q Consensus 226 ~~L~~~-L~~~Gl~-----l~~~~~~----~~tvGG~v~~~~~G~~~~~yG~~~D~v~-------~~~vV~~dG~i~~~~ 288 (572)
.+|.+. +.+.++. +....++ .+||||++.++.. .+|.+. .+++..++| ..+..
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEEE
Confidence 999963 3333332 1222333 4999999999942 345444 588888998 33332
Q ss_pred cccccCcCCccchhhhhcCCCCeEEEEEEEEeeecc
Q 008252 289 SRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKI 324 (572)
Q Consensus 289 ~~~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p~ 324 (572)
.. +...||.-..+- .| -|||+++|.+.+.
T Consensus 149 ~~--df~~g~~~t~l~---~~--eii~~i~ip~~~~ 177 (287)
T 1ffv_C 149 AD--GFFLGTYMTLLE---EN--EVMVEIRVPAFAQ 177 (287)
T ss_dssp ST--TTEEETTEESCC---TT--CEEEEEEEECCCT
T ss_pred HH--HHhcCcccccCC---CC--CEEEEEEecCCCC
Confidence 22 111223211111 13 6999999988653
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.65 E-value=1.9e-05 Score=84.70 Aligned_cols=153 Identities=15% Similarity=0.101 Sum_probs=95.0
Q ss_pred CCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC--CCCCCCcEEEEcCC---CCCcEEeccCCCeEEEcCCC
Q 008252 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSL---MKSVKALHIEDMDVVVEPGI 223 (572)
Q Consensus 149 ~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~--~~~~~~gvvIdl~~---mn~i~~~~~~~~~v~v~aGv 223 (572)
+....+++|+|.+|+.++++.. . +..+.+|||++.-. .-....+++||+++ |+.|. .+++.++++||+
T Consensus 175 G~a~~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~---~~~~~l~IGA~v 247 (462)
T 2w3s_A 175 GQTAPAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIR---ETPDGYGIGAGV 247 (462)
T ss_dssp ----CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEE---EETTEEEEETTC
T ss_pred CCccEEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEE---EcCCEEEEccCC
Confidence 4444578999999999988753 2 56889999998411 00112368999988 56664 345579999999
Q ss_pred CHHHHHHHHccCCCc-c----CCCCCCc----ccccccccccccCCCccccccccceee----eEEEEeeCCcEEEcccc
Q 008252 224 GWMELNEYLEPYGLF-F----PLDPGPG----ATIGGMCATRCSGSLAVRYGTMRDNVI----NLKVVLANGDVVKTASR 290 (572)
Q Consensus 224 ~~~~L~~~L~~~Gl~-l----~~~~~~~----~tvGG~v~~~~~G~~~~~yG~~~D~v~----~~~vV~~dG~i~~~~~~ 290 (572)
++.+|.+.+.+ .+. | ....++. +||||++.++.. .+.+..-++ .+++..++|+ .+....
T Consensus 248 tl~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp~~ 319 (462)
T 2w3s_A 248 TIAALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMPLE 319 (462)
T ss_dssp BHHHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCBGG
T ss_pred cHHHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEEHH
Confidence 99999998543 332 2 3333444 899999999853 244555566 6777778883 222111
Q ss_pred cccCcCCccchhhhhcCCCCeEEEEEEEEeeec
Q 008252 291 ARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQK 323 (572)
Q Consensus 291 ~~~~~~g~dl~~~~~Gs~G~lGIIt~~tlkl~p 323 (572)
+...||.-..+ ..| -||+++.|...+
T Consensus 320 --dF~~g~~~t~L---~~~--Eii~~i~iP~~~ 345 (462)
T 2w3s_A 320 --DFFLEYRKQDR---RPG--EFVESVTLPKSA 345 (462)
T ss_dssp --GGEEETTEESC---CTT--CEEEEEEEESCC
T ss_pred --HhhcccccccC---CCC--cEEEEEEEecCC
Confidence 11112211111 112 599999998754
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.30 E-value=0.00022 Score=71.91 Aligned_cols=151 Identities=18% Similarity=0.118 Sum_probs=91.2
Q ss_pred CCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-CCC-CCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHH
Q 008252 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH-TLS-PNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (572)
Q Consensus 151 p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~-~~~-~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L 228 (572)
+-.+++|+|.+|+.++++.. +-+..+.+|||++.-. ... ...+++||++++..+..+..+++.++++|++++.+|
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~l 81 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHAL 81 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHHH
T ss_pred ceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHH
Confidence 44588999999999988643 3468889999996210 000 133799999865333223345668999999999999
Q ss_pred HH--HHccCCCc-cC----CCCCC----cccccccccccccCCCccccccccceee-------eEEEEeeCCcEEEcccc
Q 008252 229 NE--YLEPYGLF-FP----LDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGDVVKTASR 290 (572)
Q Consensus 229 ~~--~L~~~Gl~-l~----~~~~~----~~tvGG~v~~~~~G~~~~~yG~~~D~v~-------~~~vV~~dG~i~~~~~~ 290 (572)
.+ .+.++ +. +. .-.++ .+||||+++++. ..+|.+. .+++..++|+ .+..-.
T Consensus 82 ~~~~~~~~~-~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~~~ 150 (288)
T 1n62_C 82 IGSDFLAAK-LPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIVAAR 150 (288)
T ss_dssp HHCHHHHHH-CHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEEEHH
T ss_pred hcChHHHHH-HHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEEEHH
Confidence 95 45442 21 11 11222 489999999882 2455544 5667777874 223211
Q ss_pred cccCcCCccchhhhhc-CCCCeEEEEEEEEeeec
Q 008252 291 ARKSAAGYDLTRLIIG-SEGTLGIITEVTLRLQK 323 (572)
Q Consensus 291 ~~~~~~g~dl~~~~~G-s~G~lGIIt~~tlkl~p 323 (572)
|++....- ....--|||++.|...+
T Consensus 151 --------df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 151 --------DYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp --------HHEEETTEESCCTTCEEEEEEEECCC
T ss_pred --------HHhcCcccccCCCCCEEEEEEeCCCC
Confidence 22211100 01112689999998754
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.22 E-value=0.0007 Score=68.73 Aligned_cols=126 Identities=13% Similarity=0.066 Sum_probs=80.1
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCC--CCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCH
Q 008252 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGW 225 (572)
Q Consensus 148 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~--~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~ 225 (572)
++.+..+++|+|.+|+.++++. +. ...+.+|||++.-.- -......+||++++..+..+..+++.++++|++++
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACAL 82 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBH
T ss_pred cCCCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcH
Confidence 3567789999999999887743 22 357789999873100 00123689999975544333445678999999999
Q ss_pred HHHHHHHccC-------------CCc--cCCCCCC----cccccccccccccCCCccccccccceee----eEEEEeeCC
Q 008252 226 MELNEYLEPY-------------GLF--FPLDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI----NLKVVLANG 282 (572)
Q Consensus 226 ~~L~~~L~~~-------------Gl~--l~~~~~~----~~tvGG~v~~~~~G~~~~~yG~~~D~v~----~~~vV~~dG 282 (572)
.+|.+.+.++ .+. +..-.++ .+||||+++++.. .+.+.--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcCCC
Confidence 9999887532 111 2222222 5899999998843 122222222 466677777
Q ss_pred c
Q 008252 283 D 283 (572)
Q Consensus 283 ~ 283 (572)
+
T Consensus 157 ~ 157 (305)
T 3nvz_B 157 R 157 (305)
T ss_dssp E
T ss_pred c
Confidence 4
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=95.74 E-value=0.0066 Score=61.00 Aligned_cols=120 Identities=13% Similarity=0.009 Sum_probs=75.8
Q ss_pred CCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCC--CCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHH
Q 008252 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT--LSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (572)
Q Consensus 151 p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~--~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L 228 (572)
|--+++|+|.+|+.++++. +-...+.+|||++.-.- -......+||++++..+..+..+++.+++++++++.+|
T Consensus 5 ~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l 80 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRN 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHH
T ss_pred CceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHHH
Confidence 4458899999999988863 22367789999852100 00123689999985433333346678999999999999
Q ss_pred HH--HHccCC--Cc--cCCCCCC----cccccccccccccCCCccccccccceee-------eEEEEeeCCc
Q 008252 229 NE--YLEPYG--LF--FPLDPGP----GATIGGMCATRCSGSLAVRYGTMRDNVI-------NLKVVLANGD 283 (572)
Q Consensus 229 ~~--~L~~~G--l~--l~~~~~~----~~tvGG~v~~~~~G~~~~~yG~~~D~v~-------~~~vV~~dG~ 283 (572)
.+ .+.++- +. +..-.++ -+|+||.+++.. ..+|... .+++..++|+
T Consensus 81 ~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~ 143 (288)
T 1t3q_C 81 KTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGV 143 (288)
T ss_dssp HHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEE
T ss_pred hcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCce
Confidence 97 443321 11 1111111 489999998662 1355544 5667777774
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.53 E-value=0.22 Score=50.02 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=65.2
Q ss_pred CCEEEEcCCHHHHHHHHHHHHhCCC-CEEEECCCCCCCCCC-C-CCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHH
Q 008252 151 PDIIVFPRSEDEVSKIVKCCDKHKV-PIIPYGGATSIEGHT-L-SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWME 227 (572)
Q Consensus 151 p~~vv~P~s~eeV~~iv~~a~~~~~-~v~~~GgG~s~~g~~-~-~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~ 227 (572)
+--+++|+|.+|+.++++ +++- ...+.+|||++.-.- . ......+||++++..+..+..+++.++++|++++.+
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQ 79 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHH
Confidence 345788999999887764 3332 467789999873100 0 012368999998654444445677899999999999
Q ss_pred HHHH--HccC-C-Cc--cCCCCCC----ccccccccccc
Q 008252 228 LNEY--LEPY-G-LF--FPLDPGP----GATIGGMCATR 256 (572)
Q Consensus 228 L~~~--L~~~-G-l~--l~~~~~~----~~tvGG~v~~~ 256 (572)
|.+. +.++ . +. +..-.++ .+|+||++++.
T Consensus 80 l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a 118 (296)
T 3hrd_C 80 IENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTS 118 (296)
T ss_dssp HHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHT
T ss_pred HHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccC
Confidence 9853 2211 0 10 1111122 48999999865
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=88.54 E-value=0.76 Score=46.64 Aligned_cols=99 Identities=17% Similarity=0.212 Sum_probs=62.8
Q ss_pred CCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC---CCCCCCCcEEEEcCCCCCcEEeccC-CCeEEEcCCCCHH
Q 008252 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEG---HTLSPNGGVCIDLSLMKSVKALHIE-DMDVVVEPGIGWM 226 (572)
Q Consensus 151 p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g---~~~~~~~gvvIdl~~mn~i~~~~~~-~~~v~v~aGv~~~ 226 (572)
|-.+++|+|.+|..++++ + -.-.+.+|||++.- ... ..-..+||++++..+..+..+ ++.++++|++++.
T Consensus 6 ~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~-~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~ 79 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGL-GHPAALVDLTGIDGLATISTLADGSLRIGAGATLE 79 (324)
T ss_dssp CCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTS-CCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHH
T ss_pred ceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccC-CCCCEEEECCCChhhcceEECCCCeEEEccCCcHH
Confidence 345789999999888775 2 24677899998621 001 133689999876443333333 4479999999999
Q ss_pred HHHHH--HccC-C-Cc--cCCCCCC----cccccccccc
Q 008252 227 ELNEY--LEPY-G-LF--FPLDPGP----GATIGGMCAT 255 (572)
Q Consensus 227 ~L~~~--L~~~-G-l~--l~~~~~~----~~tvGG~v~~ 255 (572)
+|.+. +.++ . +. +....++ -+||||++++
T Consensus 80 ~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~ 118 (324)
T 1rm6_B 80 AIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQ 118 (324)
T ss_dssp HHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTC
T ss_pred HHHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeeccc
Confidence 99875 2221 0 00 1111111 3899999974
No 36
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=76.01 E-value=3.6 Score=49.55 Aligned_cols=105 Identities=13% Similarity=0.040 Sum_probs=68.0
Q ss_pred CCCCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCC-C-CCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHH
Q 008252 149 NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHT-L-SPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWM 226 (572)
Q Consensus 149 ~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~~-~-~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~ 226 (572)
+.+...++|.|.+|+.++++. +. .-.+.+|||++.-.- . ...-..+||++++..+..+..+++.++++|++++.
T Consensus 231 ~~~~~~~~P~sl~ea~~ll~~---~~-~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~ 306 (1332)
T 3unc_A 231 GERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALS 306 (1332)
T ss_dssp CSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHH
T ss_pred CCceEEEccCCHHHHHHHHhh---CC-CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHH
Confidence 356678999999998887653 21 236678998863100 0 01235899999865443344566789999999999
Q ss_pred HHHHHHccC-------CC-ccC-------CCCCC----cccccccccccc
Q 008252 227 ELNEYLEPY-------GL-FFP-------LDPGP----GATIGGMCATRC 257 (572)
Q Consensus 227 ~L~~~L~~~-------Gl-~l~-------~~~~~----~~tvGG~v~~~~ 257 (572)
+|.+.+.+. .. .+| .-.++ -+||||++++..
T Consensus 307 ~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~as 356 (1332)
T 3unc_A 307 SVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITAS 356 (1332)
T ss_dssp HHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCC
T ss_pred HHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccC
Confidence 999876432 00 011 11111 389999998874
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=66.65 E-value=2.3 Score=51.31 Aligned_cols=80 Identities=10% Similarity=0.102 Sum_probs=52.7
Q ss_pred CCEEEEcCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC--CCCCCCcEEEEcCCCCCcEEeccCCCeEEEcCCCCHHHH
Q 008252 151 PDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGH--TLSPNGGVCIDLSLMKSVKALHIEDMDVVVEPGIGWMEL 228 (572)
Q Consensus 151 p~~vv~P~s~eeV~~iv~~a~~~~~~v~~~GgG~s~~g~--~~~~~~gvvIdl~~mn~i~~~~~~~~~v~v~aGv~~~~L 228 (572)
-...++|.|.+|+.++...-- +.+ ...|+|.++=. .-..+-.++||+.+...+..+..++..++++|++++.++
T Consensus 240 ~~~w~~P~tl~el~~l~~~~p--~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 240 RTTWIAPGTLNDLLELKMKHP--SAP--LVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp SCEEEECSSHHHHHHHHHHCT--TSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred CceEecCCCHHHHHHHHHHCC--CCe--EEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 345789999999988754322 223 34577764200 001123588998865555445567778999999999999
Q ss_pred HHHHcc
Q 008252 229 NEYLEP 234 (572)
Q Consensus 229 ~~~L~~ 234 (572)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988854
No 38
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=27.49 E-value=3.5e+02 Score=24.50 Aligned_cols=46 Identities=24% Similarity=0.301 Sum_probs=31.2
Q ss_pred eeeeeecch----hHHHHHHH-HHHHhccCCcEEEEEEEe-cCCceEEEEee
Q 008252 447 ISDVCVPLS----CLAELISR-SKKELDASPLICTVIAHA-GDGNFHTVILF 492 (572)
Q Consensus 447 ~~D~~vP~s----~l~e~l~~-~~~~~~~~~~~~~~~gH~-gdG~~h~~i~~ 492 (572)
...+++|.+ +-.++++. +++.+..+|+.+.+..|. +++|.|+.|++
T Consensus 73 e~~iALP~EL~~eq~~~L~~~f~~~~~~~~G~~~d~AIH~~~~~NpHaHim~ 124 (185)
T 2ns6_A 73 EVEFALPVELTLDQQKALASEFAQHLTGAERLPYTLAIHAGGGENPHCHLMI 124 (185)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCEEEEEEEETTTEEEEEEEE
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHHHHhcCCEEEEEEEcCCCCCceEEEEE
Confidence 456777763 22333333 345567789988888997 88999887765
No 39
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=25.30 E-value=1.4e+02 Score=22.99 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=30.1
Q ss_pred CCCeEEEcCCCCHHHHHHHHccCCCccCCCCCCccccccccccc
Q 008252 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (572)
Q Consensus 213 ~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~~~~tvGG~v~~~ 256 (572)
+++...|.+-+.+.+|++.+ |+.+|. ...-|+||++...
T Consensus 7 ~dg~~~v~g~~~l~dl~~~l---~~~l~~--~~~~Tl~G~i~~~ 45 (81)
T 3lae_A 7 SDGSMIIDGSANLRDLNKMF---NWELDT--EDARTFNGLILEH 45 (81)
T ss_dssp TTSCEEEETTCBHHHHHHHH---CCCCCC--SSCSBHHHHHHHH
T ss_pred CCCEEEEEeeCCHHHHHHHh---CCCCCC--CCCccHHHHHHHH
Confidence 45678899999999999987 444553 2357999999876
No 40
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=22.92 E-value=1.3e+02 Score=23.31 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=30.0
Q ss_pred CCCeEEEcCCCCHHHHHHHHccCCCccCCCCCCccccccccccc
Q 008252 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (572)
Q Consensus 213 ~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~~~~tvGG~v~~~ 256 (572)
+++...|.+-+.+.+|++.+ |+.+|- ...-|+||++...
T Consensus 7 ~dg~~~v~G~~~l~dl~~~l---~~~l~~--~~~~Tl~G~i~~~ 45 (83)
T 3llb_A 7 PSGDFIVKALTPVDAFNDFF---GSEFSD--EEFDTVGGLVMSA 45 (83)
T ss_dssp TTSCEEEETTCBHHHHHHHH---CCCCCT--TTCSBHHHHHHHH
T ss_pred CCCEEEEEccCCHHHHHHHh---CCCCCC--CCCcCHHHHHHHH
Confidence 45678899999999999987 445552 2356999998766
No 41
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.76 E-value=47 Score=33.84 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE
Q 008252 158 RSEDEVSKIVKCCDKHKVPIIPY 180 (572)
Q Consensus 158 ~s~eeV~~iv~~a~~~~~~v~~~ 180 (572)
=|.+|+.+||++|++.+|.|+|-
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPE 114 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPE 114 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCEEEEe
Confidence 48999999999999999999874
No 42
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=22.68 E-value=1.1e+02 Score=25.86 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=28.5
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHHHhCCCCEE
Q 008252 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII 178 (572)
Q Consensus 148 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~ 178 (572)
.+.|..|+...+++|+.++.+.|.+.|+|..
T Consensus 52 ~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~ 82 (120)
T 1xty_A 52 QGQPKIIVKVNSLDEIISRAKKAETMNLPFS 82 (120)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEE
Confidence 4689999999999999999999999999964
No 43
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=22.03 E-value=1.5e+02 Score=22.93 Aligned_cols=41 Identities=32% Similarity=0.321 Sum_probs=30.2
Q ss_pred CCCeEEEcCCCCHHHHHHHHccCCCc-cCCCC-CCccccccccccc
Q 008252 213 EDMDVVVEPGIGWMELNEYLEPYGLF-FPLDP-GPGATIGGMCATR 256 (572)
Q Consensus 213 ~~~~v~v~aGv~~~~L~~~L~~~Gl~-l~~~~-~~~~tvGG~v~~~ 256 (572)
+++...|.+-+.+.+|++.+ |+. +|-.. ...-|+||++...
T Consensus 7 ~dg~~~v~G~~~l~dl~~~l---~~~~l~~~~~~~~~Tl~G~i~~~ 49 (86)
T 2pls_A 7 EDGSWLLDGLIAVPELKDTL---GLRAVPEEEKGVYHTLSGMIMWL 49 (86)
T ss_dssp TTSCEEEETTCBHHHHHHHH---TCSCCTTTTSCSCCBHHHHHHHH
T ss_pred CCCeEEEEcccCHHHHHHHh---CCCcCCCccCCCcccHHHHHHHH
Confidence 45678899999999999997 444 55311 2357999998765
No 44
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=21.92 E-value=1.1e+02 Score=25.78 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=28.7
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHHHhCCCCEEE
Q 008252 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPIIP 179 (572)
Q Consensus 148 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~~ 179 (572)
.+.|..|+...+++|+.++.+.|.+.|+|...
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~ 84 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNAL 84 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEE
Confidence 46899999999999999999999999999643
No 45
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=21.13 E-value=1.2e+02 Score=23.86 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=30.2
Q ss_pred CCCeEEEcCCCCHHHHHHHHccCCCccCCCCCCccccccccccc
Q 008252 213 EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATR 256 (572)
Q Consensus 213 ~~~~v~v~aGv~~~~L~~~L~~~Gl~l~~~~~~~~tvGG~v~~~ 256 (572)
+++...|.+.+.+.+|++.+ |+.+|- ...-|+||++...
T Consensus 14 ~dg~~~v~G~~~l~dl~~~l---~~~l~~--~~~~TlgG~i~~~ 52 (93)
T 2r2z_A 14 ADNEYLVQGRMLIDEFNEVF---ETDLHM--SDVDTMAGYLITA 52 (93)
T ss_dssp ETTEEEEETTSBHHHHHHHH---TCCCCC--TTCCBHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHh---CCCCCC--CCcccHHHHHHHH
Confidence 45678899999999999997 445553 2357999998765
No 46
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=20.97 E-value=1.3e+02 Score=25.65 Aligned_cols=36 Identities=8% Similarity=-0.004 Sum_probs=30.2
Q ss_pred CCCCCEEEEcCCHHHHHHHHHHHHhCCCCEE-EECCC
Q 008252 148 VNIPDIIVFPRSEDEVSKIVKCCDKHKVPII-PYGGA 183 (572)
Q Consensus 148 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~~v~-~~GgG 183 (572)
.+.+..|+...|++|+.++.+.|++.|+|.. ++-.|
T Consensus 46 ~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG 82 (123)
T 1rzw_A 46 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAG 82 (123)
T ss_dssp GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3678999999999999999999999999964 34444
No 47
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=20.45 E-value=1e+02 Score=24.62 Aligned_cols=22 Identities=14% Similarity=-0.074 Sum_probs=19.0
Q ss_pred CEEEEcCCHHHHHHHHHHHHhC
Q 008252 152 DIIVFPRSEDEVSKIVKCCDKH 173 (572)
Q Consensus 152 ~~vv~P~s~eeV~~iv~~a~~~ 173 (572)
-.++.|++-+|.++++...++.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~ 28 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDG 28 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTT
T ss_pred EEEEecCcHHHHHHHHHHHHCC
Confidence 4688999999999999988763
Done!