Query 008253
Match_columns 572
No_of_seqs 118 out of 221
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 21:49:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008253.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008253hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v77_A PH1877P, hypothetical p 99.6 3.8E-16 1.3E-20 144.0 8.2 89 2-90 117-208 (212)
2 2wje_A CPS4B, tyrosine-protein 91.6 1.1 3.7E-05 41.3 10.0 83 2-91 154-244 (247)
3 1m65_A Hypothetical protein YC 91.2 0.34 1.2E-05 43.5 6.1 85 2-95 145-233 (245)
4 2y1h_A Putative deoxyribonucle 91.1 1.1 3.6E-05 41.0 9.4 81 2-91 177-265 (272)
5 2vc7_A Aryldialkylphosphatase; 85.2 3.1 0.0001 38.5 8.4 87 2-89 209-313 (314)
6 2yxo_A Histidinol phosphatase; 83.8 2.2 7.6E-05 38.6 6.7 68 2-74 178-249 (267)
7 3qy7_A Tyrosine-protein phosph 82.8 6.1 0.00021 37.7 9.6 84 2-92 150-235 (262)
8 1xwy_A DNAse TATD, deoxyribonu 82.3 8.3 0.00028 34.8 9.8 82 2-89 165-260 (264)
9 3k2g_A Resiniferatoxin-binding 82.0 3.8 0.00013 41.0 8.1 89 2-93 249-356 (364)
10 2ob3_A Parathion hydrolase; me 81.9 5.3 0.00018 38.5 8.9 86 2-90 206-325 (330)
11 3rhg_A Putative phophotriester 79.8 4.9 0.00017 40.2 8.1 88 2-92 240-345 (365)
12 1bf6_A Phosphotriesterase homo 79.5 6.4 0.00022 35.5 8.0 85 2-89 195-290 (291)
13 1zzm_A Putative deoxyribonucle 78.7 8.7 0.0003 34.5 8.7 81 2-89 166-256 (259)
14 1yix_A Deoxyribonuclease YCFH; 76.8 14 0.00047 33.1 9.3 83 2-91 164-256 (265)
15 2gzx_A Putative TATD related D 74.2 26 0.00088 31.2 10.4 86 2-94 162-258 (265)
16 3tn4_A Phosphotriesterase; lac 73.7 8.2 0.00028 38.9 7.8 88 2-90 250-359 (360)
17 1j6o_A TATD-related deoxyribon 73.1 16 0.00055 33.6 9.0 82 2-90 173-264 (268)
18 3ovg_A Amidohydrolase; structu 72.1 11 0.00037 38.0 8.2 86 3-90 227-329 (363)
19 2w9m_A Polymerase X; SAXS, DNA 71.7 2.2 7.7E-05 44.9 3.3 70 2-80 476-546 (578)
20 3dcp_A Histidinol-phosphatase; 68.9 1.3 4.6E-05 42.5 0.9 57 2-62 211-270 (283)
21 2xio_A Putative deoxyribonucle 64.6 34 0.0012 32.2 9.5 80 2-90 180-291 (301)
22 3rcm_A TATD family hydrolase; 62.9 18 0.00061 34.9 7.4 88 2-95 167-268 (287)
23 3b0x_A DNA polymerase beta fam 62.8 6.7 0.00023 41.2 4.8 72 2-82 488-561 (575)
24 3gtx_A Organophosphorus hydrol 62.4 15 0.00051 36.3 6.9 85 2-89 230-338 (339)
25 3pnz_A Phosphotriesterase fami 61.9 18 0.00061 35.7 7.3 86 2-89 225-326 (330)
26 2i5g_A Amidohydrolase; NYSGXRC 57.6 42 0.0014 33.3 9.2 92 2-93 198-323 (325)
27 3cjp_A Predicted amidohydrolas 50.1 46 0.0016 30.0 7.4 68 8-90 196-263 (272)
28 3gg7_A Uncharacterized metallo 46.8 67 0.0023 30.6 8.3 79 2-90 157-243 (254)
29 3ly0_A Dipeptidase AC. metallo 42.7 73 0.0025 32.6 8.3 97 1-97 250-359 (364)
30 1itu_A Renal dipeptidase; glyc 36.6 83 0.0028 32.0 7.6 96 1-96 236-341 (369)
31 3nqb_A Adenine deaminase 2; PS 36.0 74 0.0025 33.6 7.4 80 3-90 251-335 (608)
32 2dvt_A Thermophilic reversible 33.2 72 0.0025 29.2 6.0 72 4-89 251-322 (327)
33 4gib_A Beta-phosphoglucomutase 29.6 12 0.0004 33.3 0.1 19 354-372 7-25 (250)
34 3gnh_A L-lysine, L-arginine ca 29.6 97 0.0033 28.8 6.3 86 2-90 255-357 (403)
35 3guw_A Uncharacterized protein 29.5 17 0.0006 34.5 1.3 80 1-89 165-246 (261)
36 2vun_A Enamidase; nicotinate d 29.5 2.3E+02 0.008 26.2 8.9 84 2-90 233-319 (386)
37 3ooq_A Amidohydrolase; structu 25.1 69 0.0024 30.5 4.5 86 2-90 259-345 (396)
38 3feq_A Putative amidohydrolase 22.6 77 0.0026 29.7 4.3 62 25-90 300-361 (423)
39 4g6x_A Glyoxalase/bleomycin re 22.4 21 0.00073 29.5 0.4 22 354-375 7-28 (155)
40 2rag_A Dipeptidase; aminohydro 21.1 3E+02 0.01 28.4 8.6 94 1-95 267-411 (417)
No 1
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=99.63 E-value=3.8e-16 Score=143.99 Aligned_cols=89 Identities=18% Similarity=0.254 Sum_probs=85.5
Q ss_pred HHHHHHcCcEEEEEeccccCC-hhHHHHHHHHHHHHHHHhC--CCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILD-VQLRRQMISNAKLLVDWTR--GKNLILSSGASSVTELRGPYDVANLSSLLGISMERAK 78 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrD-s~aRRn~ISNArqLIRaTR--GKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeAK 78 (572)
+++|.++||+|||+|+++++. ...|++++.|++.+++++| |.+|||||+|.+++++|+|.|+++|+..|||++++++
T Consensus 117 a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~~G~~~e~~~ 196 (212)
T 1v77_A 117 AKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVVIGMEIPQAK 196 (212)
T ss_dssp HHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHHcCCCHHHHH
Confidence 789999999999999998876 5689999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHH
Q 008253 79 AAVSKNCRALIS 90 (572)
Q Consensus 79 aALSkNPRsLLl 90 (572)
.+|+.+|+.++.
T Consensus 197 ~~l~~~~~~i~~ 208 (212)
T 1v77_A 197 ASISMYPEIILK 208 (212)
T ss_dssp HTTTHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 999999999987
No 2
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=91.60 E-value=1.1 Score=41.35 Aligned_cols=83 Identities=12% Similarity=0.159 Sum_probs=56.4
Q ss_pred HHHHHHcCcEEEEEeccc--cCC-h---hHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCC-cCHHHHHHHH-HHhCCC
Q 008253 2 IKAAIERGVYFELTYSDL--ILD-V---QLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL-RGPYDVANLS-SLLGIS 73 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPa--IrD-s---~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lEL-RSPyDVINLa-sLFGLS 73 (572)
++.++++|+.+||+++.+ ... . ...+.+...+ . -.|..+++.|.|-.+.++ ..-..+..++ .-+|
T Consensus 154 l~~l~~~G~~lEiN~~s~~~~~~~g~~~~~~~~~~~~~---~--~~gl~~~~GSDaH~~~~~~~~~~~a~~~l~~~~G-- 226 (247)
T 2wje_A 154 VRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYF---L--EQDLVHVIASDMHNLDGRPPHMAEAYDLVTQKYG-- 226 (247)
T ss_dssp HHHHHHTTCEEEEEHHHHSCCCSSCCSCHHHHHHHHHH---H--HTTCCSEEECCBCCSSSSCCCHHHHHHHHHHHHC--
T ss_pred HHHHHHCCCEEEEecHhhHhcCCCCCcChHHHHHHHHH---H--HCCCeEEEEeCCCCCcccChhHHHHHHHHHHHhC--
Confidence 678899999999999877 431 1 1112222221 1 268899999999998766 3345566665 4577
Q ss_pred HHHHHHHHHHhHHHHHHh
Q 008253 74 MERAKAAVSKNCRALISN 91 (572)
Q Consensus 74 eDeAKaALSkNPRsLLl~ 91 (572)
.+.+...+..||+.||.+
T Consensus 227 ~~~~~~l~~~n~~~i~~~ 244 (247)
T 2wje_A 227 EAKAQELFIDNPRKIVMD 244 (247)
T ss_dssp HHHHHHHHTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 566777677899999865
No 3
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=91.23 E-value=0.34 Score=43.54 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=57.4
Q ss_pred HHHHHHcCcEEEEEeccccCC----hhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILD----VQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERA 77 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrD----s~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeA 77 (572)
++.+++.|+.+||+++...+. ....+.++.-++. .|-.++++|.|..+.++........++.-+|++..+.
T Consensus 145 ~~~~~~~g~~iEvn~~~~~~~~~g~~~~~~~~~~~~~~-----~g~~~~~gSDaH~~~~~g~~~~~~~~~~~~g~~~~~i 219 (245)
T 1m65_A 145 AEAAAKHQVALEINNSSFLHSRKGSEDNCREVAAAVRD-----AGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERI 219 (245)
T ss_dssp HHHHHHHTCEEEEETTC----------CHHHHHHHHHH-----HTCCEEEECCBSSGGGTTCCHHHHHHHHHTTCCGGGB
T ss_pred HHHHHHcCCEEEEECCCCcccCCCCCCchHHHHHHHHH-----cCCEEEEECCCCChHHHhhHHHHHHHHHHCCCCeEEE
Confidence 567788999999999987521 1112222222222 2778999999999999999999999999999999884
Q ss_pred HHHHHHhHHHHHHhhhhc
Q 008253 78 KAAVSKNCRALISNALRK 95 (572)
Q Consensus 78 KaALSkNPRsLLl~AlRR 95 (572)
. ..+|..++ .++++
T Consensus 220 ~---~~~~~~l~-~~l~~ 233 (245)
T 1m65_A 220 L---NVSPRRLL-NFLES 233 (245)
T ss_dssp G---GGCHHHHH-HHHHH
T ss_pred E---ECCHHHHH-HHHHH
Confidence 4 33565544 34443
No 4
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=91.13 E-value=1.1 Score=40.95 Aligned_cols=81 Identities=17% Similarity=0.295 Sum_probs=57.0
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcC----HH---H-HHHHHHHhCCC
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRG----PY---D-VANLSSLLGIS 73 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRS----Py---D-VINLasLFGLS 73 (572)
++.++++|++|.|.-. +... + .++.+++......|+|.|.+....-.|+ |. . +..|+.+.|++
T Consensus 177 ~~~~~~~g~~i~~~g~-~~~~---~-----~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~la~~~g~~ 247 (272)
T 2y1h_A 177 AMEGVRAGYFFSIPPS-IIRS---G-----QKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGIS 247 (272)
T ss_dssp HHHHHHTTCEEEECGG-GGTC---H-----HHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHHHHHHHTSC
T ss_pred HHHHHHCCCEEEECCc-ccCc---H-----HHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHHHHHHHCcC
Confidence 5678899999998732 2221 1 4677777777788999999974322222 32 2 33466779999
Q ss_pred HHHHHHHHHHhHHHHHHh
Q 008253 74 MERAKAAVSKNCRALISN 91 (572)
Q Consensus 74 eDeAKaALSkNPRsLLl~ 91 (572)
.++..+.+..||+.++.-
T Consensus 248 ~e~~~~~~~~N~~~l~~~ 265 (272)
T 2y1h_A 248 VEEVIEVTTQNALKLFPK 265 (272)
T ss_dssp HHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999888743
No 5
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=85.18 E-value=3.1 Score=38.47 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=55.6
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCC-------CCc-------C----HHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT-------ELR-------G----PYDV 63 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~l-------ELR-------S----PyDV 63 (572)
++.++++|.+|.|+....+... ........+..++.....-.|+|+|-+.... .++ + ...+
T Consensus 209 ~~~~~~~G~~i~~~~~~~~~~~-~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~ 287 (314)
T 2vc7_A 209 IKKIADKGSFIGLDRYGLDLFL-PVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDT 287 (314)
T ss_dssp HHHHHHTTCEEEECCTTCTTTS-CHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTH
T ss_pred HHHHHHcCCEEEEeCCCcccCC-CHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHH
Confidence 5678899999999964332111 1122233345555544578999999995321 221 1 1144
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHHHHH
Q 008253 64 ANLSSLLGISMERAKAAVSKNCRALI 89 (572)
Q Consensus 64 INLasLFGLSeDeAKaALSkNPRsLL 89 (572)
+......|++.++..+.++.||+.++
T Consensus 288 ~~~l~~~g~~~e~~~~~~~~N~~rlf 313 (314)
T 2vc7_A 288 IPFLKRNGVNEEVIATIFKENPKKFF 313 (314)
T ss_dssp HHHHHHTTCCHHHHHHHHTHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHCHHHHh
Confidence 45456789999999999999998764
No 6
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=83.75 E-value=2.2 Score=38.59 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=46.0
Q ss_pred HHHHHHcCcEEEEEeccccCCh---hHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCc-CHHHHHHHHHHhCCCH
Q 008253 2 IKAAIERGVYFELTYSDLILDV---QLRRQMISNAKLLVDWTRGKNLILSSGASSVTELR-GPYDVANLSSLLGISM 74 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs---~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELR-SPyDVINLasLFGLSe 74 (572)
++.++++|+.+||+.+.+.... ...+.++.-++. .|-.++++|.|..+.++. ....+..++.-+|++.
T Consensus 178 l~~~~~~g~~iEvn~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~gSDaH~~~~~~~~~~~a~~~l~~~g~~~ 249 (267)
T 2yxo_A 178 LRAVAEAGLFLDVNTAGLRRPAKEVYPAPALLRRARE-----LGIGLVLGSDAHRPEEVGFAFPEVQALLAGLGFRE 249 (267)
T ss_dssp HHHHHHHTCEEEEEGGGGGSTTCSCBSCHHHHHHHHH-----HTCCEEEECCBSSGGGTTTTHHHHHHHHHHHTCCE
T ss_pred HHHHHHcCCEEEEEchHhcCCCCCCCCCHHHHHHHHH-----cCCCEEEecCCCCHHHHHhhHHHHHHHHHHcCCCE
Confidence 5678899999999988865431 112333332222 278899999999988776 6666666666666654
No 7
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=82.76 E-value=6.1 Score=37.68 Aligned_cols=84 Identities=18% Similarity=0.136 Sum_probs=55.4
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCC-CcCHHHHHHHHH-HhCCCHHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTE-LRGPYDVANLSS-LLGISMERAKA 79 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lE-LRSPyDVINLas-LFGLSeDeAKa 79 (572)
++.+++.|+.+||+.+++...... ..-..++.+++ .|-.++|.|.|-++.. -..-.++..++. -+|. +.|+.
T Consensus 150 l~~l~~~G~~iEiN~~s~~g~~g~--~~~~~~~~~~~--~gl~~~igSDaH~~~~r~~~~~~a~~~l~~~~G~--~~a~~ 223 (262)
T 3qy7_A 150 LYHLVEKGAASQITSGSLAGIFGK--QLKAFSLRLVE--ANLIHFVASDAHNVKTRNFHTQEALYVLEKEFGS--ELPYM 223 (262)
T ss_dssp HHHHHHTTCEEEEEHHHHHTTTCH--HHHHHHHHHHH--TTCCCEEECCBCSSSSSCCCHHHHHHHHHHHHCS--HHHHH
T ss_pred HHHHHHCCCEEEEECCccCcccch--HHHHHHHHHHh--CCCeEEEEccCCCCCCCCchHHHHHHHHHHHhCH--HHHHH
Confidence 578899999999999988642111 11112233332 6888899999988764 333444455554 4775 55666
Q ss_pred HHHHhHHHHHHhh
Q 008253 80 AVSKNCRALISNA 92 (572)
Q Consensus 80 ALSkNPRsLLl~A 92 (572)
+-.||+.||.+.
T Consensus 224 -~~~n~~~il~~~ 235 (262)
T 3qy7_A 224 -LTENAELLLRNQ 235 (262)
T ss_dssp -HHHHHHHHHTTC
T ss_pred -HHHHHHHHHCCC
Confidence 678999999765
No 8
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=82.29 E-value=8.3 Score=34.77 Aligned_cols=82 Identities=17% Similarity=0.312 Sum_probs=54.6
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCC--CCC----CcC----H----HHHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASS--VTE----LRG----P----YDVANLS 67 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S--~lE----LRS----P----yDVINLa 67 (572)
++.++++|++|.|. ..+.+ ..|. ..++.+++......|++.|-+.- +.. .|+ | +-+..++
T Consensus 165 ~~~~~~~g~yi~~~--g~~~~-~~~~---~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~a 238 (264)
T 1xwy_A 165 MQACVAHGIYIGIT--GWVCD-ERRG---LELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIA 238 (264)
T ss_dssp HHHHHHTTCEEEEC--GGGGC-TTTS---HHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHH
T ss_pred HHHHHHCCeEEEEC--ccccC-CcCc---HHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHHH
Confidence 56788999999988 33320 0011 13456666666678999999853 221 222 2 3334556
Q ss_pred HHhCCCHHHHHHHHHHhHHHHH
Q 008253 68 SLLGISMERAKAAVSKNCRALI 89 (572)
Q Consensus 68 sLFGLSeDeAKaALSkNPRsLL 89 (572)
.+.|++.++..+.+..|++.++
T Consensus 239 ~~~g~~~e~~~~~~~~Na~rl~ 260 (264)
T 1xwy_A 239 HWRGEDAAWLAATTDANVKTLF 260 (264)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHCcCHHHHHHHHHHHHHHHh
Confidence 7889999999999999998775
No 9
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=81.96 E-value=3.8 Score=40.95 Aligned_cols=89 Identities=13% Similarity=0.098 Sum_probs=60.0
Q ss_pred HHHHHHcCcEEEEEeccc---cCC-------hhHHHHHHHHHHHHHHHhCCCcEEEccCCCCC--CCCc---C----HHH
Q 008253 2 IKAAIERGVYFELTYSDL---ILD-------VQLRRQMISNAKLLVDWTRGKNLILSSGASSV--TELR---G----PYD 62 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPa---IrD-------s~aRRn~ISNArqLIRaTRGKNIIISSGA~S~--lELR---S----PyD 62 (572)
.+.++++|.+++|.-.-. ..+ ...|. ...+.+++......|+|||.+... +.-| + +..
T Consensus 249 a~~~l~~G~~I~f~g~gt~~~f~~~~~~~~~d~~ra---~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~l~~~ 325 (364)
T 3k2g_A 249 QATLAQRGAFLEFDMIGMDFFYADQGVQCPSDDEVA---RAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKH 325 (364)
T ss_dssp HHHHHHHTCEEEECCTTCCCEETTTTEECCCHHHHH---HHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHH
T ss_pred HHHHHhCCcEEEecCCcccccccccccccccHHHHH---HHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcchHHHH
Confidence 467889999999984311 111 11232 245666666667899999999642 2112 1 334
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhHHHHHHhhh
Q 008253 63 VANLSSLLGISMERAKAAVSKNCRALISNAL 93 (572)
Q Consensus 63 VINLasLFGLSeDeAKaALSkNPRsLLl~Al 93 (572)
++.++.+.|++.++..+.++.||+.++.-..
T Consensus 326 ~~~~l~~~Gis~eei~~~~~~Np~rlf~l~~ 356 (364)
T 3k2g_A 326 FLPRLRRHGLDDAALETLMVTNPRRVFDASI 356 (364)
T ss_dssp HHHHHHHTTCCHHHHHHHHTHHHHHHHCTTS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhCCCc
Confidence 5556678899999999999999999886543
No 10
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=81.89 E-value=5.3 Score=38.54 Aligned_cols=86 Identities=19% Similarity=0.142 Sum_probs=55.6
Q ss_pred HHHHHHcCcEEEEEe-ccccC--------------Ch-hHHHHHHHHHHHHHHHhCCCcEEEccCCCC-CCCC---cC--
Q 008253 2 IKAAIERGVYFELTY-SDLIL--------------DV-QLRRQMISNAKLLVDWTRGKNLILSSGASS-VTEL---RG-- 59 (572)
Q Consensus 2 VRaAIERGI~FEI~Y-SPaIr--------------Ds-~aRRn~ISNArqLIRaTRGKNIIISSGA~S-~lEL---RS-- 59 (572)
.+.++++|+++.|.. +.... .+ ..| ...++.+++......|+|+|.+.. .... |+
T Consensus 206 a~~~~~~G~~i~~~~~G~~tf~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~ 282 (330)
T 2ob3_A 206 LTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTR---ALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDV 282 (330)
T ss_dssp HHHHHHTTCEEEECCTTCCCTTCTTCHHHHHHHCSSCHHHH---HHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHH
T ss_pred HHHHHhCCCEEEeCCCccccccccccccccccccCCCHHHH---HHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCc
Confidence 567899999999995 32222 11 122 223556666656689999999975 2211 11
Q ss_pred --------H-HHHHH-HHHH--hCCCHHHHHHHHHHhHHHHHH
Q 008253 60 --------P-YDVAN-LSSL--LGISMERAKAAVSKNCRALIS 90 (572)
Q Consensus 60 --------P-yDVIN-LasL--FGLSeDeAKaALSkNPRsLLl 90 (572)
+ +-+.. ++.+ .|++.++..++++.||+.++.
T Consensus 283 ~~~n~pn~~~~~~~~~ia~l~~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 283 MDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp HHHHCTTGGGHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHS
T ss_pred ccccCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 1 11233 2345 899999999999999988874
No 11
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=79.78 E-value=4.9 Score=40.24 Aligned_cols=88 Identities=19% Similarity=0.230 Sum_probs=60.9
Q ss_pred HHHHHHcCcEEEEEeccc---cCC------hhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCC--c---C----HHHH
Q 008253 2 IKAAIERGVYFELTYSDL---ILD------VQLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL--R---G----PYDV 63 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPa---IrD------s~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lEL--R---S----PyDV 63 (572)
.+.++++|.+++|.-.-. ..+ ...|.+ .++.+++......|+|||.+...... | + +..+
T Consensus 240 a~~~l~~G~~I~~~g~g~~~tf~~~~~~~~d~~~a~---~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~~~~ 316 (365)
T 3rhg_A 240 QCKMLDRGVWLEFDMIGLDISFPKEGAAPSVMDTVE---AVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVPNVF 316 (365)
T ss_dssp HHHHHHTTCEEEECCTTCCCBCSSSCBCCCHHHHHH---HHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHHHTH
T ss_pred HHHHHhCCCEEEecCCCccccccccccccchHHHHH---HHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHHHHH
Confidence 467889999999985411 111 112333 45666666667899999998753221 2 1 2456
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHHHHHHhh
Q 008253 64 ANLSSLLGISMERAKAAVSKNCRALISNA 92 (572)
Q Consensus 64 INLasLFGLSeDeAKaALSkNPRsLLl~A 92 (572)
..++.+.|++.++..+.++.||+.++...
T Consensus 317 ~~~~~~~Gis~e~i~~~~~~Np~rlf~l~ 345 (365)
T 3rhg_A 317 LSLLAQRGIDKTIIDKLCIDNPANLLAAE 345 (365)
T ss_dssp HHHHHHTTCCHHHHHHHTTHHHHHHHHSC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHCCC
Confidence 66888999999999999999999988553
No 12
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=79.51 E-value=6.4 Score=35.51 Aligned_cols=85 Identities=16% Similarity=0.114 Sum_probs=53.6
Q ss_pred HHHHHHcCcEEEEEecccc--CChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCc-----CHHH----HHHHHHHh
Q 008253 2 IKAAIERGVYFELTYSDLI--LDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELR-----GPYD----VANLSSLL 70 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaI--rDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELR-----SPyD----VINLasLF 70 (572)
++.++++|++|.++-..-+ .....+. ..++.+++...--.|+++|-+.....++ .|.. ++......
T Consensus 195 ~~~~~~~G~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~l~~~ 271 (291)
T 1bf6_A 195 ILKMIDLGAYVQFDTIGKNSYYPDEKRI---AMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQS 271 (291)
T ss_dssp HHHHHHTTCEEEECCTTCTTTSCHHHHH---HHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHHHHHHHT
T ss_pred HHHHHHCCCEEEEccCcccCCCCHHHHH---HHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHHHHHHHc
Confidence 5678899999999732211 1111122 2445566655557899999987531111 1233 33334567
Q ss_pred CCCHHHHHHHHHHhHHHHH
Q 008253 71 GISMERAKAAVSKNCRALI 89 (572)
Q Consensus 71 GLSeDeAKaALSkNPRsLL 89 (572)
|++.++..+.++.||+.++
T Consensus 272 g~~~~~~~~~~~~N~~rl~ 290 (291)
T 1bf6_A 272 GFSQADVDVMLRENPSQFF 290 (291)
T ss_dssp TCCHHHHHHHHTHHHHHHC
T ss_pred CCCHHHHHHHHHHhHHHHh
Confidence 9999999999999998764
No 13
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=78.73 E-value=8.7 Score=34.53 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=53.9
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCC--CCCc----CH----HHHHHHHHHhC
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSV--TELR----GP----YDVANLSSLLG 71 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~--lELR----SP----yDVINLasLFG 71 (572)
++.++++|++|.|. ..+.-... ...+.+++......|+++|.+.-. .-.| .| +-+..|+.+.|
T Consensus 166 ~~~~~~~g~~i~~~--g~~~~~~~-----~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la~~~g 238 (259)
T 1zzm_A 166 AERFVQLGYKIGVG--GTITYPRA-----SKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRR 238 (259)
T ss_dssp HHHHHHTTCEEEEC--GGGGCTTT-----CSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHHCS
T ss_pred HHHHHHCCCEEEEC--ceeecccc-----HHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHC
Confidence 46788999999875 43311100 123556666667889999998532 1112 12 33345667899
Q ss_pred CCHHHHHHHHHHhHHHHH
Q 008253 72 ISMERAKAAVSKNCRALI 89 (572)
Q Consensus 72 LSeDeAKaALSkNPRsLL 89 (572)
++.++..+.++.|++.++
T Consensus 239 ~~~e~~~~~~~~Na~rl~ 256 (259)
T 1zzm_A 239 EPADEIAQALLNNTYTLF 256 (259)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHh
Confidence 999999999999998876
No 14
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=76.80 E-value=14 Score=33.06 Aligned_cols=83 Identities=12% Similarity=0.188 Sum_probs=54.1
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCC--CCCc----CHH----HHHHHHHHhC
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSV--TELR----GPY----DVANLSSLLG 71 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~--lELR----SPy----DVINLasLFG 71 (572)
++..+++|++|.++-.-..... ..++.+++......|++.|.+... ...| .|. -+..|+.+.|
T Consensus 164 ~~~~~~~g~~~~~sg~~~~~~~-------~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l~~~~~ 236 (265)
T 1yix_A 164 AGKLLDLGFYISFSGIVTFRNA-------EQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKG 236 (265)
T ss_dssp HHHHHTTTCEEEECGGGGSTTC-------HHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHCCcEEEECCccccCch-------HHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHHhC
Confidence 4567788999999842111111 134566666556789999998642 1122 232 2334455689
Q ss_pred CCHHHHHHHHHHhHHHHHHh
Q 008253 72 ISMERAKAAVSKNCRALISN 91 (572)
Q Consensus 72 LSeDeAKaALSkNPRsLLl~ 91 (572)
++.++..+.+..|++.++.-
T Consensus 237 ~~~~~~~~i~~~Na~rl~~l 256 (265)
T 1yix_A 237 VAVEELAQVTTDNFARLFHI 256 (265)
T ss_dssp SCHHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHHHhCc
Confidence 99999999999999887743
No 15
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=74.24 E-value=26 Score=31.18 Aligned_cols=86 Identities=16% Similarity=0.209 Sum_probs=54.0
Q ss_pred HHHHHH-cCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCC--CCc----CHHH----HHHHHHHh
Q 008253 2 IKAAIE-RGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT--ELR----GPYD----VANLSSLL 70 (572)
Q Consensus 2 VRaAIE-RGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~l--ELR----SPyD----VINLasLF 70 (572)
++.+++ .|++|.|.-.....+. ..++.+++......|++.|.+.... ..| .|.- +-.|+.+.
T Consensus 162 ~~~~l~~~~~y~~~sg~~~~~~~-------~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 234 (265)
T 2gzx_A 162 ADIVTNKLNFYISLGGPVTFKNA-------KQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELK 234 (265)
T ss_dssp HHHHHHTSCCEEEECGGGGCSSC-------CHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHHHHHHT
T ss_pred HHHHHHHCCceEEecceeecCCc-------HHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHHHHHHHHh
Confidence 345667 8999999833222221 1355677777678999999985421 111 1222 23344568
Q ss_pred CCCHHHHHHHHHHhHHHHHHhhhh
Q 008253 71 GISMERAKAAVSKNCRALISNALR 94 (572)
Q Consensus 71 GLSeDeAKaALSkNPRsLLl~AlR 94 (572)
|++.++..+.+..|++.++.-..+
T Consensus 235 ~~~~~~~~~i~~~Na~rl~~~~~~ 258 (265)
T 2gzx_A 235 GLSYEEVCEQTTKNAEKLFNLNSL 258 (265)
T ss_dssp TCCHHHHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHHHHHhCCchh
Confidence 999999999999999888754433
No 16
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=73.70 E-value=8.2 Score=38.85 Aligned_cols=88 Identities=18% Similarity=0.113 Sum_probs=57.2
Q ss_pred HHHHHHcCcEEEEEecc---ccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcC-------------------
Q 008253 2 IKAAIERGVYFELTYSD---LILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRG------------------- 59 (572)
Q Consensus 2 VRaAIERGI~FEI~YSP---aIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRS------------------- 59 (572)
.+.++++|.++++.--- .+..+. -.+-+..++.|++......|+||..+.+....|.
T Consensus 250 ~~~~l~~G~yl~fD~iG~~~~~~~p~-d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i 328 (360)
T 3tn4_A 250 HRKTLAYGVYIAFDRFGIQGMVGAPT-DEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHL 328 (360)
T ss_dssp HHHHHTTTCEEEECCTTCCCSTTCCC-HHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHH
T ss_pred HHHHHHcCCEEEEcccccccccCCCC-hHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhH
Confidence 46789999999997421 121111 1122345678888888899999999844222221
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 008253 60 PYDVANLSSLLGISMERAKAAVSKNCRALIS 90 (572)
Q Consensus 60 PyDVINLasLFGLSeDeAKaALSkNPRsLLl 90 (572)
..+++-.+.--|++.++..+.+..||+.++.
T Consensus 329 ~~~~ip~L~~~Gvs~e~I~~i~~~NP~rlfs 359 (360)
T 3tn4_A 329 FVNIIPALKNEGIRDEVLEQMFIGNPAALFS 359 (360)
T ss_dssp HHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHHHhc
Confidence 1223333334599999999999999988763
No 17
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=73.12 E-value=16 Score=33.56 Aligned_cols=82 Identities=20% Similarity=0.314 Sum_probs=54.5
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCC--CCCcC----H----HHHHHHHHHhC
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSV--TELRG----P----YDVANLSSLLG 71 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~--lELRS----P----yDVINLasLFG 71 (572)
++.++++|++|.|.-.-...+. ..++.+++......|++.|.+.-. ...|+ | .=+-.|+.+.|
T Consensus 173 ~~~~~~~g~y~~~sg~~~~~~~-------~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~la~~~~ 245 (268)
T 1j6o_A 173 AKKFIDLGFLLGIGGPVTYPKN-------EALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLG 245 (268)
T ss_dssp HHHHHHHTEEEEECGGGGCTTC-------HHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHCCCeEEecccccccch-------HHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHHhC
Confidence 4567788999988722111111 134677777777899999998532 11222 2 22344556789
Q ss_pred CCHHHHHHHHHHhHHHHHH
Q 008253 72 ISMERAKAAVSKNCRALIS 90 (572)
Q Consensus 72 LSeDeAKaALSkNPRsLLl 90 (572)
++.++..+.+..|++.++.
T Consensus 246 ~~~e~~~~i~~~Na~rlf~ 264 (268)
T 1j6o_A 246 VPEAKVDEATTENARRIFL 264 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhC
Confidence 9999999999999988763
No 18
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=72.11 E-value=11 Score=37.99 Aligned_cols=86 Identities=23% Similarity=0.211 Sum_probs=58.4
Q ss_pred HHHH-HcCcEEEEEeccccC-ChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCC------c-----C----HHHHHH
Q 008253 3 KAAI-ERGVYFELTYSDLIL-DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL------R-----G----PYDVAN 65 (572)
Q Consensus 3 RaAI-ERGI~FEI~YSPaIr-Ds~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lEL------R-----S----PyDVIN 65 (572)
+.++ ++|.++.|.-..... .+..+ -...++.+++......|+|||.|.....+ | . ++.+..
T Consensus 227 ~~~l~~~G~yI~f~g~~~~~~~~~~~--ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p~~l~~~~~~ 304 (363)
T 3ovg_A 227 EKVIKETGVTLCFDGPDRVKYYPDSL--LAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLFDRFLP 304 (363)
T ss_dssp HHHHHHHCCEEEECCTTCTTTCCHHH--HHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHHHTHHH
T ss_pred HHHHHHCCcEEEECCeeccccCChhH--HHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCccHHHHHHHH
Confidence 5677 889999888322111 12211 12345666766677899999999742221 1 2 245666
Q ss_pred HHHHhCCCHHHHHHHHHHhHHHHHH
Q 008253 66 LSSLLGISMERAKAAVSKNCRALIS 90 (572)
Q Consensus 66 LasLFGLSeDeAKaALSkNPRsLLl 90 (572)
++.+.|++.++..+.++.||+.++.
T Consensus 305 ~a~~rGis~eei~~it~~Np~rlf~ 329 (363)
T 3ovg_A 305 LLKQVGVSKEAIFDILVNNPKRVLA 329 (363)
T ss_dssp HHHHHTCCHHHHHHHHTHHHHHHTS
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHC
Confidence 7888999999999999999998874
No 19
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=71.65 E-value=2.2 Score=44.93 Aligned_cols=70 Identities=14% Similarity=0.060 Sum_probs=54.6
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhC-CCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTR-GKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAA 80 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTR-GKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeAKaA 80 (572)
++.|+++|+++||+.++.-.+. ...++++.+ |-.++++|.|..+.++........++.-.|++.......
T Consensus 476 l~~~~e~g~~lEIN~~~~r~~~---------~~~~~~~a~eGl~i~igSDAH~~~~~~~~~~~~~~~~~~g~~~~~v~n~ 546 (578)
T 2w9m_A 476 LGACEANGTVVEINANAARLDL---------DWREALRWRERLKFAINTDAHVPGGLRDARYGVMQARKAGLTPAHVVNS 546 (578)
T ss_dssp HHHHHHHTCEEEEECSTTTCBS---------CHHHHHHHTTTCCEEEECCCSSGGGGGGHHHHHHHHHHTTCCGGGBGGG
T ss_pred HHHHHHCCCEEEEECCCCCcCc---------HHHHHHHHHcCCEEEEECCCCChhhcchHHHHHHHHHHcCCCHHHeeec
Confidence 5678899999999999874331 233444333 777999999999999988888999999999998875544
No 20
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=68.87 E-value=1.3 Score=42.53 Aligned_cols=57 Identities=12% Similarity=0.170 Sum_probs=39.4
Q ss_pred HHHHHHcCcEEEEEeccccCCh-hHHHHHHHHHHHHHHHh--CCCcEEEccCCCCCCCCcCHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDV-QLRRQMISNAKLLVDWT--RGKNLILSSGASSVTELRGPYD 62 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs-~aRRn~ISNArqLIRaT--RGKNIIISSGA~S~lELRSPyD 62 (572)
+++|+++|+.+||+-+++.++. .. ....+.+++.. .|-.+||+|.|-++.++-.-++
T Consensus 211 l~~~~~~g~~lEiN~~~l~~~~~~~----~yp~~~~~~~~~~~g~~i~igSDAH~~~~vg~~~~ 270 (283)
T 3dcp_A 211 LALVKKRDYELDFNTAGLFKPLCGE----TYPPKKIVTLASELQIPFVYGSDSHGVQDIGRGYS 270 (283)
T ss_dssp HHHHHHHTCEEEEECGGGGSTTCCS----CBSCHHHHHHHHHTTCCEEEECCBSSGGGTTTTHH
T ss_pred HHHHHHcCCEEEEechHhcCCCCCC----cCCHHHHHHHHHHcCCCEEEEcCCCCHHHHhChHH
Confidence 6899999999999999976531 10 01123334444 3778999999999988755443
No 21
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=64.63 E-value=34 Score=32.18 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=54.6
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCC--------------------CC----
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT--------------------EL---- 57 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~l--------------------EL---- 57 (572)
++.++++|++|.|.-. .+... + .+.+++......|+|.|-+.-.. -.
T Consensus 180 ~~~~l~~g~yi~~~g~-~~~~~--~------~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~ 250 (301)
T 2xio_A 180 AAALIDLDLYIGFNGC-SLKTE--A------NLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHC 250 (301)
T ss_dssp HHHHHHTTCEEEECGG-GSSSH--H------HHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSE
T ss_pred HHHHHhcCcEEEEccc-ccCCh--H------HHHHHHhCChHHEEEecCCCcccccccccccccccccCccccccccccc
Confidence 5678999999999732 22211 1 13566666678899999996421 00
Q ss_pred ---cC-HH---HHH-HHHHHhCCCHHHHHHHHHHhHHHHHH
Q 008253 58 ---RG-PY---DVA-NLSSLLGISMERAKAAVSKNCRALIS 90 (572)
Q Consensus 58 ---RS-Py---DVI-NLasLFGLSeDeAKaALSkNPRsLLl 90 (572)
|+ |. .++ .|+.+.|++.++..+.+..|++.++.
T Consensus 251 ~~~~n~p~~v~~~~~~ia~l~g~~~e~~~~~~~~Na~rlf~ 291 (301)
T 2xio_A 251 LKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFF 291 (301)
T ss_dssp ETTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCChHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhC
Confidence 11 22 333 45678899999999999999988874
No 22
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=62.92 E-value=18 Score=34.92 Aligned_cols=88 Identities=17% Similarity=0.155 Sum_probs=59.1
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCC--CC----cC----H----HHHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT--EL----RG----P----YDVANLS 67 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~l--EL----RS----P----yDVINLa 67 (572)
++.+++.|++|-|. +.+...... ...+.+++...--.|+|.|-+.-.. .. |+ | +=+-.|+
T Consensus 167 a~~~l~~G~yis~~-g~i~~~k~~-----~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~~lA 240 (287)
T 3rcm_A 167 LFAYLDLDLHIGIT-GWICDERRG-----THLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVA 240 (287)
T ss_dssp HHHHHHTTCEEEEC-GGGGCTTTC-----GGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHHHHH
T ss_pred HHHHHHCCcEEEEC-chhccccCH-----HHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHHHHH
Confidence 57789999999988 333321111 1345677777778899999986422 12 22 2 2334456
Q ss_pred HHhCCCHHHHHHHHHHhHHHHHHhhhhc
Q 008253 68 SLLGISMERAKAAVSKNCRALISNALRK 95 (572)
Q Consensus 68 sLFGLSeDeAKaALSkNPRsLLl~AlRR 95 (572)
.+.|++.++..+.++.|++.++.-..+.
T Consensus 241 ~~~g~s~eev~~~~~~N~~rlf~l~~~~ 268 (287)
T 3rcm_A 241 LHRGESAEHTAAHTTATARDFFQLPAEN 268 (287)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHhCcCHHHHHHHHHHHHHHHHCCChhh
Confidence 7899999999999999999887544333
No 23
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=62.85 E-value=6.7 Score=41.17 Aligned_cols=72 Identities=22% Similarity=0.123 Sum_probs=54.6
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHh--CCCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWT--RGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKA 79 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaT--RGKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeAKa 79 (572)
++.++++|+++||+.+++-.+.. ..+++.. .|..++++|.|.++.++......+.++.-.|++..+...
T Consensus 488 l~~~~~~g~~lEIN~~~~~~~~~---------~~~~~~a~e~G~~~vigSDAH~~~~~~~~~~~~~~~~~~g~~~~~v~n 558 (575)
T 3b0x_A 488 FQKAKEKGVAVEIDGYYDRMDLP---------DDLARMAYGMGLWISLSTDAHQTDHLRFMELAVGTAQRAWIGPERVLN 558 (575)
T ss_dssp HHHHHHHTCEEEEECCTTTCBSC---------HHHHHHHHHTTCCEEEECCBSSGGGGGGHHHHHHHHHHTTCCSTTBGG
T ss_pred HHHHHHcCCEEEEeCCCCcCCch---------HHHHHHHHHcCCeEEEECCCCChHHhhhHHHHHHHHHHcCCCHHHeec
Confidence 46788899999999998643311 1222222 378899999999999998888899999999999887655
Q ss_pred HHH
Q 008253 80 AVS 82 (572)
Q Consensus 80 ALS 82 (572)
+++
T Consensus 559 ~~~ 561 (575)
T 3b0x_A 559 TLD 561 (575)
T ss_dssp GSC
T ss_pred CCC
Confidence 543
No 24
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=62.40 E-value=15 Score=36.29 Aligned_cols=85 Identities=19% Similarity=0.105 Sum_probs=58.8
Q ss_pred HHHHHHcCcEEEEEeccc--cC---ChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCC--------CC-------cC--
Q 008253 2 IKAAIERGVYFELTYSDL--IL---DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVT--------EL-------RG-- 59 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPa--Ir---Ds~aRRn~ISNArqLIRaTRGKNIIISSGA~S~l--------EL-------RS-- 59 (572)
.+.++++|.++.|.-.-. .. ....|. ..++.+++......|+|||.+...+ .- ..
T Consensus 230 a~~~l~~G~~i~~~g~~t~~~~~~p~~~~~~---~~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~ 306 (339)
T 3gtx_A 230 HRETLRHGVSIAFDRIGLQGMVGTPTDAERL---SVLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPL 306 (339)
T ss_dssp HHHHHTTTCEEEECCTTCCSSTTCCCHHHHH---HHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTT
T ss_pred HHHHHHcCcEEEEccCccccccCCCchHHHH---HHHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCCCCch
Confidence 456789999999876421 11 111232 3456677766688999999987521 01 11
Q ss_pred --HHHHHHHHHHhCCCHHHHHHHHHHhHHHHH
Q 008253 60 --PYDVANLSSLLGISMERAKAAVSKNCRALI 89 (572)
Q Consensus 60 --PyDVINLasLFGLSeDeAKaALSkNPRsLL 89 (572)
+..+.-++.+.|++.++..+.++.||+.++
T Consensus 307 ~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf 338 (339)
T 3gtx_A 307 HISDDILPDLRRRGITEEQVGQMTVGNPARLF 338 (339)
T ss_dssp HHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 256667888999999999999999998875
No 25
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=61.95 E-value=18 Score=35.73 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=55.9
Q ss_pred HHHHHHcCcEEEEEeccccCC-hhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCC-----c-CHHHH----H-HH---
Q 008253 2 IKAAIERGVYFELTYSDLILD-VQLRRQMISNAKLLVDWTRGKNLILSSGASSVTEL-----R-GPYDV----A-NL--- 66 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrD-s~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lEL-----R-SPyDV----I-NL--- 66 (572)
.+.++++|.++.|.-.....- +.. .-...++.+++......|+|||.+.....+ + ++..+ + .|
T Consensus 225 a~~~l~~G~~i~~~g~~t~~~~~~~--~~~~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~~l~~~ 302 (330)
T 3pnz_A 225 HKQVAKTGAFMSFDGIAKIKYAPES--ARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDE 302 (330)
T ss_dssp HHHHHTTTCEEEECCTTCTTTCCHH--HHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHHHHHHH
T ss_pred HHHHHHcCcEEEEccCcccCCCChH--HHHHHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHHHHHHH
Confidence 467889999999885322211 111 123345666666667899999999753221 1 11112 1 33
Q ss_pred HHHhCCCHHH-HHHHHHHhHHHHH
Q 008253 67 SSLLGISMER-AKAAVSKNCRALI 89 (572)
Q Consensus 67 asLFGLSeDe-AKaALSkNPRsLL 89 (572)
+.+-|++.++ ..+.++.||+.++
T Consensus 303 a~~~Gis~ee~i~~~t~~Np~rlf 326 (330)
T 3pnz_A 303 ANEKGFDGEKLVKKFFVDNPARCF 326 (330)
T ss_dssp HHHTTSCHHHHHHHHHTHHHHHHS
T ss_pred HHHcCCCHHHHHHHHHHHhHHHHh
Confidence 4788999998 9999999998875
No 26
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=57.61 E-value=42 Score=33.32 Aligned_cols=92 Identities=11% Similarity=0.160 Sum_probs=72.6
Q ss_pred HHHHHHcCcEEEEEeccccCC---hhHHHHHHHHHHHHHHHhCCCcEEEccCC---------------------------
Q 008253 2 IKAAIERGVYFELTYSDLILD---VQLRRQMISNAKLLVDWTRGKNLILSSGA--------------------------- 51 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrD---s~aRRn~ISNArqLIRaTRGKNIIISSGA--------------------------- 51 (572)
+++.+++|=.+.|+|.|.+-. ...-..++.++.-++++..-..|.|.|.=
T Consensus 198 irala~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgiGsDf~~~~~~~~~~~~~~~dg~~~~~~~~G~ 277 (325)
T 2i5g_A 198 LKFIADHGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGIGTDFTQGHGHDFFEWLTHDKGYARRLTNFGK 277 (325)
T ss_dssp HHHHHHTTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEECCCBCTTCCHHHHHHHHBGGGTSSBCCCCCS
T ss_pred HHHHHHcCCeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEECCcCcccccccchhhhcccccccccccccCC
Confidence 688899999999998876643 23345677777778888888889999875
Q ss_pred -CCCCCCcCHHHHHHHHHHh---CCCHHHHHHHHHHhHHHHHHhhh
Q 008253 52 -SSVTELRGPYDVANLSSLL---GISMERAKAAVSKNCRALISNAL 93 (572)
Q Consensus 52 -~S~lELRSPyDVINLasLF---GLSeDeAKaALSkNPRsLLl~Al 93 (572)
..+..+..+.++-+|..-| |+++++.+..+..|...++....
T Consensus 278 ~~~~~gl~~~~~~~~l~~~L~~~G~se~~i~ki~g~N~lRvl~~v~ 323 (325)
T 2i5g_A 278 IVNPLGIRTVGEFPNLTETLLKRGMPERVVRKVMGENWVRVLRDVW 323 (325)
T ss_dssp CCCCBTCSSGGGTHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCcccCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3455688888888887643 99999999999999988876653
No 27
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=50.07 E-value=46 Score=30.04 Aligned_cols=68 Identities=10% Similarity=0.067 Sum_probs=49.3
Q ss_pred cCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHHHHHHHHhHHH
Q 008253 8 RGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVSKNCRA 87 (572)
Q Consensus 8 RGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeAKaALSkNPRs 87 (572)
+|++|.+. ..+. . ..++.+++... ..|++.|..... .|.........+|++.++..+.+..|++.
T Consensus 196 ~~~y~~~s--~~~~-~-------~~~~~~~~~~~-dril~gSD~P~~----~~~~~~~~~~~~~l~~~~~~~i~~~Na~r 260 (272)
T 3cjp_A 196 QNLYLDTS--AYFS-T-------FVLKIVINELP-LKCIFGTDMPFG----DLQLSIEAIKKMSNDSYVANAVLGDNISR 260 (272)
T ss_dssp TTEEEECT--TCSC-H-------HHHHHHHHHST-TTEECCCCTTSS----CHHHHHHHHHHHCSSHHHHHHHHTHHHHH
T ss_pred CCEEEEec--cccc-H-------HHHHHHHHhCC-CeEEEeCCCCCC----ChHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68998874 2221 1 23566777775 899999998653 45666666666899999999999999988
Q ss_pred HHH
Q 008253 88 LIS 90 (572)
Q Consensus 88 LLl 90 (572)
++.
T Consensus 261 l~~ 263 (272)
T 3cjp_A 261 LLN 263 (272)
T ss_dssp HHT
T ss_pred HhC
Confidence 764
No 28
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=46.79 E-value=67 Score=30.58 Aligned_cols=79 Identities=20% Similarity=0.353 Sum_probs=56.6
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcC----H----HHHHHHHHHhCCC
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRG----P----YDVANLSSLLGIS 73 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRS----P----yDVINLasLFGLS 73 (572)
++.+++.|.+|-|. ..+.. . ...+.+++...--.|++-|-+.-. ..|+ | +=+..|+.+.|++
T Consensus 157 a~~~l~~G~yis~~--g~~~~----~---~~~~~~v~~ip~drlLlETD~P~~-~~rg~~n~P~~v~~v~~~iA~~~g~~ 226 (254)
T 3gg7_A 157 LRRAISLGCWFSVG--PTMVR----T---QKGAALIRSMPRDRVLTETDGPFL-ELDGQAALPWDVKSVVEGLSKIWQIP 226 (254)
T ss_dssp HHHHHHTTCEEEEC--HHHHT----S---HHHHHHHHHSCGGGEEECCCTTTS-EETTEECCGGGHHHHHHHHHHHHTSC
T ss_pred HHHHHcCCcEEEEC--cccCc----h---HHHHHHHHHcCCCeEEEeCCCCcc-ccCCCCCCHHHHHHHHHHHHHHhCcC
Confidence 57789999998665 33321 1 134677888887889999988642 2332 3 3345567899999
Q ss_pred HHHHHHHHHHhHHHHHH
Q 008253 74 MERAKAAVSKNCRALIS 90 (572)
Q Consensus 74 eDeAKaALSkNPRsLLl 90 (572)
.++..+.+..|++.++.
T Consensus 227 ~ee~~~~~~~N~~~lf~ 243 (254)
T 3gg7_A 227 ASEVERIVKENVSRLLG 243 (254)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 99999999999988874
No 29
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=42.65 E-value=73 Score=32.57 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=75.8
Q ss_pred CHHHHHHcCcEEEEEeccccCCh-------hHHHHHHHHHHHHHHHhCCCcEEEcc---CCCCCCCCcCHHHHHHHHHHh
Q 008253 1 MIKAAIERGVYFELTYSDLILDV-------QLRRQMISNAKLLVDWTRGKNLILSS---GASSVTELRGPYDVANLSSLL 70 (572)
Q Consensus 1 MVRaAIERGI~FEI~YSPaIrDs-------~aRRn~ISNArqLIRaTRGKNIIISS---GA~S~lELRSPyDVINLasLF 70 (572)
++++-+++|=.+.|+|.|.+-.. ..=..++.++.-++.+..-..|-|.| |...+..|..+.+.-+|..-|
T Consensus 250 ~l~ala~~GGvigv~f~~~fl~~~~~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~gl~d~s~~p~L~~~L 329 (364)
T 3ly0_A 250 QLAMIRESRGMVGLNFATSFLREDGRRSAEMGWEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQGIADVTGLPALQAAM 329 (364)
T ss_dssp HHHHHHHTTCEEEECCCHHHHSTTCCCCSCCCSHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTTTCSGGGHHHHHHHH
T ss_pred HHHHHHHcCcEEEEeccHhhhcCCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 47888999999999998866321 23357888888888888778888888 566778888999998887644
Q ss_pred ---CCCHHHHHHHHHHhHHHHHHhhhhccc
Q 008253 71 ---GISMERAKAAVSKNCRALISNALRKKH 97 (572)
Q Consensus 71 ---GLSeDeAKaALSkNPRsLLl~AlRRRs 97 (572)
|.++++.+..+..|...++..+.+...
T Consensus 330 ~~rG~se~~i~ki~g~N~lRvl~~~e~~~~ 359 (364)
T 3ly0_A 330 RAHGYDEPLMRKLCHENWYGLLERTWGEGH 359 (364)
T ss_dssp HHHTCCHHHHHHHHTHHHHHHHHHHC----
T ss_pred HHCCCCHHHHHHHHhHhHHHHHHHHHhccc
Confidence 999999999999999999988876644
No 30
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=36.59 E-value=83 Score=32.04 Aligned_cols=96 Identities=6% Similarity=0.047 Sum_probs=74.7
Q ss_pred CHHHHHHcCcEEEEEeccccCC---hhHHHHHHHHHHHHHHHhCCCcEEEccCC----CCCCCCcCHHHHHHHHHH---h
Q 008253 1 MIKAAIERGVYFELTYSDLILD---VQLRRQMISNAKLLVDWTRGKNLILSSGA----SSVTELRGPYDVANLSSL---L 70 (572)
Q Consensus 1 MVRaAIERGI~FEI~YSPaIrD---s~aRRn~ISNArqLIRaTRGKNIIISSGA----~S~lELRSPyDVINLasL---F 70 (572)
++++-+++|=.+.|+|.|.+-. ...=..++.+..-++++..-..|-|.|.= ..+..|..+.+.-+|..- -
T Consensus 236 ~l~~la~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p~l~~~L~~~ 315 (369)
T 1itu_A 236 VLRLVKQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRR 315 (369)
T ss_dssp HHHHHHHHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEEEechhhcCCCCCCCHHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHc
Confidence 3678889999999999886642 23345677788888888887889999863 345678888888887753 4
Q ss_pred CCCHHHHHHHHHHhHHHHHHhhhhcc
Q 008253 71 GISMERAKAAVSKNCRALISNALRKK 96 (572)
Q Consensus 71 GLSeDeAKaALSkNPRsLLl~AlRRR 96 (572)
|+++++.+..+..|...++.....-+
T Consensus 316 G~se~~i~ki~g~N~lRvl~~v~~~a 341 (369)
T 1itu_A 316 NWTEAEVKGALADNLLRVFEAVEQAS 341 (369)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHhHhHHHHHHHHHHHH
Confidence 99999999999999988888876543
No 31
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=36.02 E-value=74 Score=33.59 Aligned_cols=80 Identities=16% Similarity=0.080 Sum_probs=52.2
Q ss_pred HHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHH--HhCCCcEEEccCCCCCCCCcC---HHHHHHHHHHhCCCHHHH
Q 008253 3 KAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVD--WTRGKNLILSSGASSVTELRG---PYDVANLSSLLGISMERA 77 (572)
Q Consensus 3 RaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIR--aTRGKNIIISSGA~S~lELRS---PyDVINLasLFGLSeDeA 77 (572)
..++++|.++-|. +...++ +..++.+++ ...+.++.+.|-...+..++. ....+..+.-+||+..++
T Consensus 251 ~e~l~~G~~i~i~-gs~~~~-------~~~l~~~i~~~~~~g~~v~lgTD~~~p~~~~~~g~l~~~v~~~~~~Gls~~ea 322 (608)
T 3nqb_A 251 MAKLRAGLTIELR-GSHDHL-------LPEFVAALNTLGHLPQTVTLCTDDVFPDDLLQGGGLDDVVRRLVRYGLKPEWA 322 (608)
T ss_dssp HHHHHTTCEEEEE-SSSGGG-------HHHHHHHHHHHTSCCTTEEEECBSCCHHHHHHTCSHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHCCCEEEEe-cccccc-------HHHHHHHHHhHhhcCceEEEecCCCCCcchhhhcchHHHHHHHHHcCCCHHHH
Confidence 4567889999887 433322 123334444 346889999998765544432 233344444469999999
Q ss_pred HHHHHHhHHHHHH
Q 008253 78 KAAVSKNCRALIS 90 (572)
Q Consensus 78 KaALSkNPRsLLl 90 (572)
.++.+.||..++-
T Consensus 323 l~~aT~n~A~~lg 335 (608)
T 3nqb_A 323 LRAATLNAAQRLG 335 (608)
T ss_dssp HHHHTHHHHHHHT
T ss_pred HHHHHHHHHHHcC
Confidence 9999999977763
No 32
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=33.22 E-value=72 Score=29.22 Aligned_cols=72 Identities=7% Similarity=-0.043 Sum_probs=49.9
Q ss_pred HHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHHHHHHHH
Q 008253 4 AAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVSK 83 (572)
Q Consensus 4 aAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeAKaALSk 83 (572)
..+++|++|.+... +. -..++.+++...-..|++.|.... -.|..++....-+|++.++..+.+..
T Consensus 251 ~~~~~n~y~~~sg~--~~--------~~~~~~~~~~~g~dril~gSD~P~----~~~~~~~~~~~~~~l~~~~~~~i~~~ 316 (327)
T 2dvt_A 251 DYFNENFHITTSGN--FR--------TQTLIDAILEIGADRILFSTDWPF----ENIDHASDWFNATSIAEADRVKIGRT 316 (327)
T ss_dssp HHHHHHEEEECTTC--CC--------HHHHHHHHTTTCGGGEECCCCTTT----SCHHHHHHHHHHSSSCHHHHHHHHTH
T ss_pred HHHhhcEEEeccCC--CC--------HHHHHHHHHHhCcccEEEecCCCC----ccHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 34457888887631 11 123456666665678999999864 24666666555569999999999999
Q ss_pred hHHHHH
Q 008253 84 NCRALI 89 (572)
Q Consensus 84 NPRsLL 89 (572)
|++.++
T Consensus 317 Na~rl~ 322 (327)
T 2dvt_A 317 NARRLF 322 (327)
T ss_dssp HHHHHT
T ss_pred hHHHHh
Confidence 998875
No 33
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=29.61 E-value=12 Score=33.35 Aligned_cols=19 Identities=37% Similarity=0.555 Sum_probs=1.4
Q ss_pred cccCccccccccccccccc
Q 008253 354 ESSGVDFDSQNVAMGEVGM 372 (572)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~ 372 (572)
-||||+||++|+.+.++.|
T Consensus 7 ~~~~~~~~~~~~~~~~~~M 25 (250)
T 4gib_A 7 HSSGVDLGTENLYFQSNAM 25 (250)
T ss_dssp -----------------CC
T ss_pred CcccccCCCCCcccCccch
Confidence 3699999999999888776
No 34
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=29.57 E-value=97 Score=28.83 Aligned_cols=86 Identities=14% Similarity=0.172 Sum_probs=49.7
Q ss_pred HHHHHHcCcEEEEEeccccC-----------Chh---H---HHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcCHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLIL-----------DVQ---L---RRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVA 64 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIr-----------Ds~---a---RRn~ISNArqLIRaTRGKNIIISSGA~S~lELRSPyDVI 64 (572)
++...++|+.+..+...... ... . ....+.+++.+++ .|-+|.+.|.+.....--.+..+.
T Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Gv~v~~gTD~~~~~~~~~~~e~~ 332 (403)
T 3gnh_A 255 IKLAVQKGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALK--AGVKMVYGTDAGIYPHGDNAKQFA 332 (403)
T ss_dssp HHHHHHHTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH--HTCEEECCCCBTTBCTTCGGGHHH
T ss_pred HHHHHHCCCEEEeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEecCCCCCCCCchHHHHH
Confidence 45678899988776532210 000 0 1122234555554 366788887763221111133433
Q ss_pred HHHHHhCCCHHHHHHHHHHhHHHHHH
Q 008253 65 NLSSLLGISMERAKAAVSKNCRALIS 90 (572)
Q Consensus 65 NLasLFGLSeDeAKaALSkNPRsLLl 90 (572)
++.-.||+..+|.++.|.||..++-
T Consensus 333 -~~~~~gl~~~~al~~aT~~~A~~lg 357 (403)
T 3gnh_A 333 -VMVRYGATPLQAIQSATLTAAEALG 357 (403)
T ss_dssp -HHHHTTCCHHHHHHHTTHHHHHHHT
T ss_pred -HHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 4445699999999999999977764
No 35
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=29.49 E-value=17 Score=34.51 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=51.2
Q ss_pred CHHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCC-CCC-cCHHHHHHHHHHhCCCHHHHH
Q 008253 1 MIKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSV-TEL-RGPYDVANLSSLLGISMERAK 78 (572)
Q Consensus 1 MVRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~-lEL-RSPyDVINLasLFGLSeDeAK 78 (572)
+++.++++|.+|-|...|.+... .+++.+++...--.|++.|.+... .+- .-|+-+..|+.+.|++. ..
T Consensus 165 ~a~~~l~~G~yis~~~~pg~~t~-------~~~~~~v~~ipldrlLlETD~P~~pn~P~~v~~~~~~la~~~g~~~--v~ 235 (261)
T 3guw_A 165 TLDMVLETEYWIGLTVQPGKLSA-------EDAARIVAEHGPERFMLNSDAGYRDVEITTVAEAAVKIEEAVGREE--ME 235 (261)
T ss_dssp THHHHHTSSSEEEEECC--------------CCTTGGGGCC-CCEEEECCCCCC------CCCCTTHHHHHCTTGG--GG
T ss_pred HHHHHHhCCEEEEecCCCCcccH-------HHHHHHHHhCCcceEEEecCCCCCCCCHHHHHHHHHHHHhhCChhH--HH
Confidence 46788999999999865443211 123577777777889999998641 000 01133556778899987 77
Q ss_pred HHHHHhHHHHH
Q 008253 79 AAVSKNCRALI 89 (572)
Q Consensus 79 aALSkNPRsLL 89 (572)
+.+..|++.++
T Consensus 236 ~~~~~Na~rlf 246 (261)
T 3guw_A 236 KVARENARKFL 246 (261)
T ss_dssp HHHHSSHHHHT
T ss_pred HHHHHHHHHHH
Confidence 88888988776
No 36
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=29.48 E-value=2.3e+02 Score=26.23 Aligned_cols=84 Identities=13% Similarity=0.044 Sum_probs=48.6
Q ss_pred HHHHHHcCcEEEEEeccccCChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCC---CCCcCHHHHHHHHHHhCCCHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLILDVQLRRQMISNAKLLVDWTRGKNLILSSGASSV---TELRGPYDVANLSSLLGISMERAK 78 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIrDs~aRRn~ISNArqLIRaTRGKNIIISSGA~S~---lELRSPyDVINLasLFGLSeDeAK 78 (572)
++.+.++|+++=+++. +.. +..-...++.+++..--..++|+|-+... ...-.+...+.++...||+..++.
T Consensus 233 ~~~~~~~g~~vl~~~~----~g~-~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~~~~ls~~~~~ 307 (386)
T 2vun_A 233 VDRIMDETDFAMEIVQ----CGN-PKIADYVARRAAEKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIASMSDIDPEVAV 307 (386)
T ss_dssp HHHHHHHCCCEEEEES----SSC-HHHHHHHHHHHHHHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHcCCeEEEecc----CCc-ccccHHHHHHHHHcCCCceeEEecCCCCCCCCCcchhHHHHHHHHhhcCCCHHHHH
Confidence 5667789998822221 111 22223344444443222288898886311 111223344445556799999999
Q ss_pred HHHHHhHHHHHH
Q 008253 79 AAVSKNCRALIS 90 (572)
Q Consensus 79 aALSkNPRsLLl 90 (572)
++++.||..++-
T Consensus 308 ~~~T~n~A~~lg 319 (386)
T 2vun_A 308 CMATGNSTAVYG 319 (386)
T ss_dssp HHHTHHHHHHHT
T ss_pred HHHhHHHHHHcC
Confidence 999999977663
No 37
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=25.05 E-value=69 Score=30.48 Aligned_cols=86 Identities=13% Similarity=0.048 Sum_probs=54.3
Q ss_pred HHHHHHcCcEEEEEeccccC-ChhHHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHHHHH
Q 008253 2 IKAAIERGVYFELTYSDLIL-DVQLRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAA 80 (572)
Q Consensus 2 VRaAIERGI~FEI~YSPaIr-Ds~aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeAKaA 80 (572)
++...++|+.+.+|=.-... +...|..-+..++.+++ .|..+.+.|.+.. ...+.....+.++...||+..+|.++
T Consensus 259 ~~~l~~~gv~v~~~P~~~~~~~~~~~~~~~~~~~~l~~--~Gv~v~lgtD~~~-~~~~~l~~~~~~~~~~gl~~~~al~~ 335 (396)
T 3ooq_A 259 SKVLAEKKIPVVVGPLLTFRTKLELKDLTMETIAKLLK--DGVLIALMCDHPV-IPLEFATVQAATAMRYGAKEEDLLKI 335 (396)
T ss_dssp HHHHHHHTCCEEECCCSSCCCSGGGTTCCTTHHHHHHH--TTCCEEECCTTTT-SCGGGHHHHHHHGGGGTCCHHHHHHT
T ss_pred HHHHHHCCCCEEECcccccccchhHHhhhhHHHHHHHH--CCCEEEEEcCCCc-cCccHHHHHHHHHHHcCCCHHHHHHH
Confidence 45677889988765321111 12222223344555554 4778888887642 22344455666777889999999999
Q ss_pred HHHhHHHHHH
Q 008253 81 VSKNCRALIS 90 (572)
Q Consensus 81 LSkNPRsLLl 90 (572)
+|.||..++-
T Consensus 336 ~T~n~A~~lg 345 (396)
T 3ooq_A 336 LTVNPAKILG 345 (396)
T ss_dssp TTHHHHHHTT
T ss_pred HHHHHHHHhC
Confidence 9999977663
No 38
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=22.56 E-value=77 Score=29.72 Aligned_cols=62 Identities=5% Similarity=-0.005 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEccCCCCCCCCcCHHHHHHHHHHhCCCHHHHHHHHHHhHHHHHH
Q 008253 25 LRRQMISNAKLLVDWTRGKNLILSSGASSVTELRGPYDVANLSSLLGISMERAKAAVSKNCRALIS 90 (572)
Q Consensus 25 aRRn~ISNArqLIRaTRGKNIIISSGA~S~lELRSPyDVINLasLFGLSeDeAKaALSkNPRsLLl 90 (572)
.|...+..++.+++. |-+|.+.|.+.....-+....+..+.. +|+..+|.++.|.||..++-
T Consensus 300 ~~~~~~~~~~~l~~~--Gv~v~~gTD~~~~~~~~~~~e~~~~~~--~ls~~eal~~aT~~~A~~lg 361 (423)
T 3feq_A 300 VQQKGRESLEIYANA--GVKMGFGSDLLGEMHAFQSGEFRIRAE--VLGNLEALRSATTVAAEIVN 361 (423)
T ss_dssp HHHHHHHHHHHHHHH--TCCBCCCCCCCGGGGGGTTHHHHHHHT--TSCHHHHHHTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHC--CCEEEECCCCCCCCCcchHHHHHHHHh--hCCHHHHHHHHHHHHHHHhC
Confidence 344566666666654 667777777643232244445444433 39999999999999977654
No 39
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=22.43 E-value=21 Score=29.47 Aligned_cols=22 Identities=36% Similarity=0.587 Sum_probs=5.2
Q ss_pred cccCcccccccccccccccccc
Q 008253 354 ESSGVDFDSQNVAMGEVGMKID 375 (572)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~ 375 (572)
.|||+++|++|..+..+.||+.
T Consensus 7 ~~~~~~~g~~nl~~~~~~Mri~ 28 (155)
T 4g6x_A 7 HSSGVDLGTENLYFQSNAMRIH 28 (155)
T ss_dssp ----------------CCCCCC
T ss_pred cccCCCcCcccceeccCceEEE
Confidence 4799999999999999999986
No 40
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=21.07 E-value=3e+02 Score=28.38 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=70.5
Q ss_pred CHHHHHHcCcEEEEEeccccCCh---------------------------------------------hHHHHHHHHHHH
Q 008253 1 MIKAAIERGVYFELTYSDLILDV---------------------------------------------QLRRQMISNAKL 35 (572)
Q Consensus 1 MVRaAIERGI~FEI~YSPaIrDs---------------------------------------------~aRRn~ISNArq 35 (572)
++++-.++|=.+.|+|. .+... ..=..++.+..-
T Consensus 267 ~l~~la~~GGvigv~f~-fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~atl~~~~~Hidh 345 (417)
T 2rag_A 267 RLKKIADAGGAICINSI-YLTDTTPSPERKAALEALGRAPDMKTATPEAVKAYADKRAAIDKAHPAARGDFDLYMKSMLH 345 (417)
T ss_dssp HHHHHHHTTCEEEECSS-SSSCCCCCCC----------CCCTTTSCHHHHHHHHHHHHHHHHHSCCCCCBHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEEE-EecCcccchhhhhhhhhhhhccccccccccchhhhhhhhhhhhhccCCCCCCHHHHHHHHHH
Confidence 36788899999999987 55431 112346667777
Q ss_pred HHHHhCCCcEEEccC---CCCCCCCcCHHHHHHHHHH---hCCCHHHHHHHHHHhHHHHHHhhhhc
Q 008253 36 LVDWTRGKNLILSSG---ASSVTELRGPYDVANLSSL---LGISMERAKAAVSKNCRALISNALRK 95 (572)
Q Consensus 36 LIRaTRGKNIIISSG---A~S~lELRSPyDVINLasL---FGLSeDeAKaALSkNPRsLLl~AlRR 95 (572)
++++..-..|-|.|. ...+..+..+.+.-+|..- -|.++++.+..+..|...|+......
T Consensus 346 i~~~~G~dhVgiGsDfDG~~~~~gl~dvs~~p~L~~~Ll~rG~se~di~ki~g~N~lRvl~~v~~~ 411 (417)
T 2rag_A 346 VLKVAGPKGVCVGADWDGGGGMDGFEDITDLPKITARLKAEGYSDADIEAIWSGNVLRIVDAAQAY 411 (417)
T ss_dssp HHHHHCTTSEEECCCTTTTCCBBTBSSGGGTHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhcCCceEEEccCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777788999984 3446677888888888763 49999999999999998888776543
Done!