Your job contains 1 sequence.
>008254
MVCTANDLSAWKDFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDK
PENFHVAIVEVTTSNTDGSFKFLETAKDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNF
QLGAVEFLRKPLSEDKLRNLWQHVVHKAFNAGGSALSDSLKPVKESVVSMLHLKLENGES
KNEKSENTEYVLVPQQSDNEQSVPNDKYPAPSTPQLKQGGRLLDDIDCQDNTNFSTEKES
AEQDGESKFVETTCGNSIAEGTLQEDKPQRPRETIVKEEHDPTNGSKTECNMLPLPYEKD
NLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRI
LELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPHARDQMLRNYYPHKPIMAFPPY
HSNHLVPTGPVYPVWGAPSNHLAAVQMWAPPGYPPWQQAESWNWKPYPGMPADAWGCPVM
PLPNGPYSSFPQGASGYHNSGVDDNSYAMPQNSVDLHPAEEVIDKVVKEAISKPWLPLPL
GLKPPSADSVLAELSRQGISTIPPRINGSHPC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008254
(572 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops... 676 1.1e-118 2
TAIR|locus:2167639 - symbol:GLK2 "AT5G44190" species:3702... 399 3.9e-37 1
UNIPROTKB|Q5Z5I4 - symbol:GLK1 "Probable transcription fa... 311 9.7e-26 1
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 199 1.5e-23 2
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 205 3.5e-23 3
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 203 8.5e-23 2
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 194 1.1e-22 2
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 182 1.1e-22 2
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 182 1.1e-22 2
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 198 3.7e-22 2
TAIR|locus:2155954 - symbol:APRR4 "pseudo-response regula... 168 3.1e-20 2
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 170 6.0e-19 2
TAIR|locus:2148348 - symbol:BOA "AT5G59570" species:3702 ... 207 2.6e-16 2
TAIR|locus:2058445 - symbol:MYBC1 "AT2G40970" species:370... 197 8.1e-15 1
TAIR|locus:2175364 - symbol:AT5G05090 "AT5G05090" species... 195 1.3e-14 1
TAIR|locus:2103247 - symbol:AT3G10760 "AT3G10760" species... 197 5.4e-13 1
TAIR|locus:2063746 - symbol:AT2G03500 "AT2G03500" species... 197 1.3e-12 1
TAIR|locus:2085984 - symbol:AT3G25790 species:3702 "Arabi... 176 1.8e-10 1
TAIR|locus:2045761 - symbol:AT2G01060 species:3702 "Arabi... 159 6.0e-10 2
TAIR|locus:2031210 - symbol:AT1G25550 species:3702 "Arabi... 170 7.5e-10 1
TAIR|locus:2089260 - symbol:AT3G13040 species:3702 "Arabi... 172 8.7e-10 1
TAIR|locus:2115070 - symbol:AT4G37180 species:3702 "Arabi... 169 1.1e-09 1
TAIR|locus:2038957 - symbol:AT2G20400 "AT2G20400" species... 169 1.4e-09 1
TAIR|locus:2063141 - symbol:AT2G40260 "AT2G40260" species... 167 2.6e-09 1
TAIR|locus:2139865 - symbol:PHR1 "phosphate starvation re... 166 3.3e-09 1
TAIR|locus:2199342 - symbol:APRR6 "pseudo-response regula... 125 1.2e-08 2
TAIR|locus:2026863 - symbol:AT1G68670 species:3702 "Arabi... 159 1.4e-08 1
TAIR|locus:2148720 - symbol:PHL1 "AT5G29000" species:3702... 160 1.6e-08 1
TAIR|locus:2010297 - symbol:AT1G49560 "AT1G49560" species... 157 2.0e-08 1
TAIR|locus:2095933 - symbol:MYR2 species:3702 "Arabidopsi... 156 3.9e-08 1
TAIR|locus:2204518 - symbol:AT1G14600 "AT1G14600" species... 150 4.9e-08 1
TAIR|locus:2172394 - symbol:MYR1 "myb-related protein 1" ... 154 6.8e-08 1
TAIR|locus:2170199 - symbol:AT5G06800 species:3702 "Arabi... 145 9.0e-08 2
TAIR|locus:2119425 - symbol:UNE16 "unfertilized embryo sa... 148 1.5e-07 1
TAIR|locus:2100880 - symbol:AT3G04450 species:3702 "Arabi... 149 2.9e-07 1
TAIR|locus:2093726 - symbol:AT3G24120 species:3702 "Arabi... 145 3.3e-07 1
TAIR|locus:2205339 - symbol:HRS1 "HYPERSENSITIVITY TO LOW... 146 3.8e-07 1
TAIR|locus:2051572 - symbol:AT2G06020 "AT2G06020" species... 144 4.4e-07 1
TAIR|locus:2026739 - symbol:AT1G69580 species:3702 "Arabi... 145 4.6e-07 1
TAIR|locus:2125771 - symbol:AT4G04580 "AT4G04580" species... 125 4.7e-07 1
TAIR|locus:2157146 - symbol:AT5G45580 species:3702 "Arabi... 142 4.9e-07 1
TAIR|locus:2041145 - symbol:AT2G02060 species:3702 "Arabi... 141 5.7e-07 1
TAIR|locus:2206415 - symbol:APL "ALTERED PHLOEM DEVELOPME... 143 8.9e-07 1
TAIR|locus:2042927 - symbol:AT2G38300 "AT2G38300" species... 142 1.0e-06 1
TAIR|locus:2087740 - symbol:AT3G12730 species:3702 "Arabi... 137 1.2e-06 1
TAIR|locus:2041539 - symbol:AT2G42660 "AT2G42660" species... 136 2.1e-06 1
TAIR|locus:2171427 - symbol:KAN "KANADI" species:3702 "Ar... 128 5.1e-05 1
TAIR|locus:2028346 - symbol:KAN2 "AT1G32240" species:3702... 127 6.1e-05 1
TAIR|locus:2163852 - symbol:ATS "AT5G42630" species:3702 ... 123 8.4e-05 1
UNIPROTKB|Q0J235 - symbol:RL9 "Probable transcription fac... 127 0.00010 1
TAIR|locus:505006489 - symbol:KAN3 "AT4G17695" species:37... 119 0.00033 1
>TAIR|locus:2141020 [details] [associations]
symbol:APRR2 species:3702 "Arabidopsis thaliana"
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
Uniprot:Q6LA43
Length = 535
Score = 676 (243.0 bits), Expect = 1.1e-118, Sum P(2) = 1.1e-118
Identities = 182/393 (46%), Positives = 228/393 (58%)
Query: 206 DKYPAPSTPQLKQGGRLLDDIDCQDNTNFS-------TEKESAE--QD-GESKFVETTCG 255
+K PAPSTPQLKQ RLLD DCQ+N NFS TEK++ E QD GESK V+TT
Sbjct: 175 EKDPAPSTPQLKQDSRLLDG-DCQENINFSMENVNSSTEKDNMEDHQDIGESKSVDTT-- 231
Query: 256 NSIAEGTLQEDKP--QRPRETIVKEEHDPTNGSKTE-CNMLPLPYEKDNLKGSNCVIENP 312
L +DK + R KEE T +E + + + ++D K N
Sbjct: 232 ----NRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPIN------ 281
Query: 313 SKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRH 372
K+SG++N GNK +RKK VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKV LTRH
Sbjct: 282 -KSSGIKNVSGNKTSRKK--VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRH 338
Query: 373 NVASHLQKYRMHRRHILPKED-DRKWPHARDQML---RNY----YPHKPIMAFPPYHSNH 424
NVASHLQK+R HR++ILPK+D + +W +R+ RNY H+P+MA+P +
Sbjct: 339 NVASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVFQQQHRPVMAYPVWGLPG 398
Query: 425 LVPTGPVYPVWGAPSNHLAAVQMWAPPGYPPWQQAESWNWKP-YPGMPADAWGCPVMPLP 483
+ P G + P+W P L ++ G PP W+WKP YP + +AWGCPV P
Sbjct: 399 VYPPGAIPPLWPPP---LQSI------GQPP-----PWHWKPPYPTVSGNAWGCPVGPPV 444
Query: 484 NGPY---SSFPQGASGYHNSGVDDNSYAMPQNSVDLHPAEEVIDKVVKEAISXXXXXXXX 540
G Y S+ G Y N G + MP + P EE++D+VVKEAIS
Sbjct: 445 TGSYITPSNTTAGGFQYPN-GAETGFKIMPASQ----PDEEMLDQVVKEAISKPWLPLPL 499
Query: 541 XXXXXSADSVLAELSRQGISTIPPR---INGSH 570
SA+SVLAEL+RQGIS +P INGSH
Sbjct: 500 GLKPPSAESVLAELTRQGISAVPSSSCLINGSH 532
Score = 513 (185.6 bits), Expect = 1.1e-118, Sum P(2) = 1.1e-118
Identities = 113/179 (63%), Positives = 132/179 (73%)
Query: 1 MVCTANDLSAWKDFPKGLRVLLL------DQDSSAAAELKFKLEAMDYIVSTFYNENEAL 54
MV TANDLS W++FPKGL+VLLL D D S+AAE + +LE+MDYIV+TF +E EAL
Sbjct: 1 MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60
Query: 55 SAFSDKPENFHVAIVEVTTSNTDGSFKFLETAKD-LPTIITSNIHCLSTMMKCIAIMVMN 113
SA PE+FH+AIVEV S SFKFLE AKD LPTI+ S HC++T MKCIA
Sbjct: 61 SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIA----- 115
Query: 114 QLFDNNFQLGAVEFLRKPLSEDKLRNLWQHVVHKAFNAGGSALSDSLKPVKESVVSMLH 172
LGAVEFL+KPLS +KL+N+WQHVVHKAFN GGS +S SLKPVKESVVSMLH
Sbjct: 116 --------LGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLH 166
>TAIR|locus:2167639 [details] [associations]
symbol:GLK2 "AT5G44190" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP;IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009910 "negative regulation of flower
development" evidence=IGI] [GO:0010380 "regulation of chlorophyll
biosynthetic process" evidence=IGI] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009657
"plastid organization" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 EMBL:AB005239
GO:GO:0009658 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
PROSITE:PS51293 GO:GO:0009910 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237698 EMBL:AB062490 EMBL:AY026773 EMBL:AY028368
EMBL:AY050386 EMBL:AY124819 IPI:IPI00535889 RefSeq:NP_199232.1
UniGene:At.19638 ProteinModelPortal:Q9FFH0 SMR:Q9FFH0 STRING:Q9FFH0
EnsemblPlants:AT5G44190.1 GeneID:834442 KEGG:ath:AT5G44190
TAIR:At5g44190 eggNOG:NOG271712 InParanoid:Q9FFH0 OMA:QEMEGNT
PhylomeDB:Q9FFH0 ProtClustDB:CLSN2916711 Genevestigator:Q9FFH0
Uniprot:Q9FFH0
Length = 386
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 105/251 (41%), Positives = 134/251 (53%)
Query: 328 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 387
+KK KVDWTPELH+KFVQAVEQLGVD+A+PSRILE+M V+ LTRHNVASHLQKYR HR+H
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 388 ILPKEDDRKWPHARDQMLRNYYPHKPIMAFPPYHSNHLVP-TGPV--YPVWGAPSNH--L 442
+L +E + A LR H + A P P T P YP AP +H
Sbjct: 205 LLAREAE-----AASWNLRR---HATV-AVPGVGGGGKKPWTAPALGYPPHVAPMHHGHF 255
Query: 443 AAVQMWAPPGYPPWQ-QAESWNWKPYPGMPADAWGCPVMPLPNGPY----SSFPQG---A 494
+ +W P +P + + + YP MPA A P + PY +PQG A
Sbjct: 256 RPLHVWGHPTWPKHKPNTPASAHRTYP-MPAIA-AAPASWPGHPPYWHQQPLYPQGYGMA 313
Query: 495 SGYHNS-GVDDNSYAMPQNSVDLHPAEEVIDKVVKEAISXXXXXXXXXXXXXSADSVLAE 553
S H+S GV +D+HP+ E ID + + IS S D V+ E
Sbjct: 314 SSNHSSIGVPTRQLGPTNPPIDIHPSNESIDAAIGDVISKPWLPLPLGLKPPSVDGVMTE 373
Query: 554 LSRQGISTIPP 564
L RQG+S +PP
Sbjct: 374 LQRQGVSNVPP 384
>UNIPROTKB|Q5Z5I4 [details] [associations]
symbol:GLK1 "Probable transcription factor GLK1"
species:39947 "Oryza sativa Japonica Group" [GO:0010638 "positive
regulation of organelle organization" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IGI]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 EMBL:AP008212 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AP005688 EMBL:AK061946 EMBL:AK065184
EMBL:AK098909 EMBL:AK122161 RefSeq:NP_001057583.2 UniGene:Os.3340
ProteinModelPortal:Q5Z5I4 STRING:Q5Z5I4
EnsemblPlants:LOC_Os06g24070.1 GeneID:4340977 KEGG:osa:4340977
Gramene:Q5Z5I4 eggNOG:NOG283574 HOGENOM:HOG000237698 OMA:IDSLTRH
ProtClustDB:CLSN2696175 GO:GO:0010638 Uniprot:Q5Z5I4
Length = 455
Score = 311 (114.5 bits), Expect = 9.7e-26, P = 9.7e-26
Identities = 82/218 (37%), Positives = 114/218 (52%)
Query: 319 QNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHL 378
++S + +KK KVDWTPELH++FVQAVEQLG+D+A+PSRILE+M ++ LTRHN+ASHL
Sbjct: 169 KSSSKSSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHL 228
Query: 379 QKYRMHRRHILPKEDDR-KWPHARDQMLRNYYPHKPIMAFPPYHSNHLVPT-G----PVY 432
QKYR HR+H++ +E + W R Q+ Y +A P + VPT G P
Sbjct: 229 QKYRSHRKHMIAREAEAASWTQRR-QI---YAAGGGAVAKRPESNAWTVPTIGFPPPPPP 284
Query: 433 PVWGAPSNHLAA-VQMWAPPGYPPWQQAESWNWKP---YPGMPADAWGCPVMPLPNGP-- 486
P AP H A + +W G+P + W P P PA W P P P+ P
Sbjct: 285 PPSPAPIQHFARPLHVW---GHPTMDPSRVPVWPPRHLVPRGPAPPWVPP--PPPSDPAF 339
Query: 487 -YSSFPQGASGYHNSGVDDNSYAMPQNSVDLHPAEEVI 523
+ + +G + G + MP P V+
Sbjct: 340 WHHPYMRGPAHVPTQGTPCMAMPMPAARFPAPPVPGVV 377
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 199 (75.1 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 328 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 387
+KK +V WT ELHKKFV AV QLG ++A+P +IL+LM VE LTR NVASHLQK+R++ +
Sbjct: 193 QKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKR 252
Query: 388 I 388
I
Sbjct: 253 I 253
Score = 151 (58.2 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 49/157 (31%), Positives = 71/157 (45%)
Query: 7 DLSAWKDFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHV 66
+L A FP G+RVL +D D + L+ L Y V+T +AL + F +
Sbjct: 6 NLEALDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDL 65
Query: 67 AIVEVTTSNTDGSFKFLETA---KDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLG 123
I +V + DG FK LE DLP I+ S +MK + G
Sbjct: 66 VISDVDMPDMDG-FKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTH-------------G 111
Query: 124 AVEFLRKPLSEDKLRNLWQHVVHKAF--NAGGSALSD 158
A ++L KP+ ++L+N+WQHVV F N G + D
Sbjct: 112 ACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGD 148
Score = 37 (18.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 293 LPLPYEKDNLKGSN 306
LP+P E D L+ +N
Sbjct: 359 LPMPLEFDQLQTNN 372
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 205 (77.2 bits), Expect = 3.5e-23, Sum P(3) = 3.5e-23
Identities = 39/63 (61%), Positives = 51/63 (80%)
Query: 326 ANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 385
+N KK +V W+ ELH++FV AV QLGV++A+P +ILELM V GLTR NVASHLQKYR++
Sbjct: 233 SNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYL 292
Query: 386 RHI 388
R +
Sbjct: 293 RRL 295
Score = 147 (56.8 bits), Expect = 3.5e-23, Sum P(3) = 3.5e-23
Identities = 46/137 (33%), Positives = 64/137 (46%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
FP GLRVL++D D + L+ L Y V+ ALS F + I +V
Sbjct: 33 FPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHM 92
Query: 74 SNTDGSFKFLETA---KDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEFLRK 130
+ DG FK LE DLP I+ S S ++K + GAV++L K
Sbjct: 93 PDMDG-FKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTH-------------GAVDYLIK 138
Query: 131 PLSEDKLRNLWQHVVHK 147
P+ + L+N+WQHVV K
Sbjct: 139 PVRMEALKNIWQHVVRK 155
Score = 38 (18.4 bits), Expect = 3.5e-23, Sum P(3) = 3.5e-23
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 399 HARDQM-LRNYYPHKPIMAFP 418
H+ M N+ P P+ +FP
Sbjct: 503 HSSSSMPYNNFQPELPVNSFP 523
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 203 (76.5 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 324 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRM 383
+ ++ KK +V W+ ELH++FV AV QLGVD+A+P +ILE+M V GLTR NVASHLQKYR+
Sbjct: 210 DSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRI 269
Query: 384 HRRHI 388
+ R +
Sbjct: 270 YLRRL 274
Score = 141 (54.7 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 46/140 (32%), Positives = 64/140 (45%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
FP LRVL++D D + L+ L Y V+ ALS F + I +V
Sbjct: 24 FPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHM 83
Query: 74 SNTDGSFKFLETA---KDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEFLRK 130
+ DG FK LE DLP I+ S S ++K + GAV++L K
Sbjct: 84 PDMDG-FKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTH-------------GAVDYLIK 129
Query: 131 PLSEDKLRNLWQHVVHKAFN 150
P+ + L+N+WQHVV K N
Sbjct: 130 PVRIEALKNIWQHVVRKKRN 149
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 194 (73.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 48/132 (36%), Positives = 69/132 (52%)
Query: 298 EKDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIP 357
+K N K E + G N + +KK +V WT ELH KF+ AV+ LGV++A+P
Sbjct: 153 DKANRKRKEQYEEEEEEERGNDND--DPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVP 210
Query: 358 SRILELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPHARDQMLRNYYPHKPIMAF 417
+IL+LM V+ LTR NVASHLQK+R+ + + + A D K + F
Sbjct: 211 KKILDLMNVDKLTRENVASHLQKFRVALKKVSDDAIQQANRAAIDSHFMQMNSQKGLGGF 270
Query: 418 PPYHSNHLVPTG 429
YH + +P G
Sbjct: 271 --YHHHRGIPVG 280
Score = 147 (56.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 44/145 (30%), Positives = 68/145 (46%)
Query: 7 DLSAWKDFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHV 66
++ FP G+RVL +D D + L+ L+ Y V+T AL + F +
Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDL 65
Query: 67 AIVEVTTSNTDGSFKFLETA---KDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLG 123
I +V + DG FK LE DLP I+ S +MK + + G
Sbjct: 66 VISDVDMPDMDG-FKLLELVGLEMDLPVIMLSAHSDPKYVMKGV-------------KHG 111
Query: 124 AVEFLRKPLSEDKLRNLWQHVVHKA 148
A ++L KP+ ++L+N+WQHVV K+
Sbjct: 112 ACDYLLKPVRIEELKNIWQHVVRKS 136
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 256 NSIAEGTLQEDKPQRPRETIVKEEHDPTNGSKTE 289
++++ G+ DK R R+ +EE + G+ +
Sbjct: 143 SNVSNGSGNCDKANRKRKEQYEEEEEEERGNDND 176
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 182 (69.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 266 DKPQRPRETIVKEEHDP--TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSC 322
+KP P + P T + TE ++ PL E +D++ N + + +++
Sbjct: 144 EKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYN------GEITDIRD-L 196
Query: 323 GNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYR 382
G K ++ WT +LH++F+ AV LG D+A+P +IL +MKV+ LTR VASHLQKYR
Sbjct: 197 G------KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
Query: 383 MHRRHILP 390
M + +P
Sbjct: 251 MQLKKSIP 258
Score = 150 (57.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 44/136 (32%), Positives = 70/136 (51%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
+P GLRVL++D D S + ++ L Y V+T+ N EA+ D P+ + I +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 74 SNTDGSFKFLE-TAK-DLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEFLRKP 131
DG E T+K +PT+I ++ +T+MK +A N GA +FL KP
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVA----N---------GAFDFLLKP 113
Query: 132 LSEDKLRNLWQHVVHK 147
+ ++L N+WQH+ K
Sbjct: 114 VRIEELSNIWQHIFRK 129
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 182 (69.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 266 DKPQRPRETIVKEEHDP--TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSC 322
+KP P + P T + TE ++ PL E +D++ N + + +++
Sbjct: 144 EKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYN------GEITDIRD-L 196
Query: 323 GNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYR 382
G K ++ WT +LH++F+ AV LG D+A+P +IL +MKV+ LTR VASHLQKYR
Sbjct: 197 G------KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
Query: 383 MHRRHILP 390
M + +P
Sbjct: 251 MQLKKSIP 258
Score = 150 (57.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 44/136 (32%), Positives = 70/136 (51%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
+P GLRVL++D D S + ++ L Y V+T+ N EA+ D P+ + I +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 74 SNTDGSFKFLE-TAK-DLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEFLRKP 131
DG E T+K +PT+I ++ +T+MK +A N GA +FL KP
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVA----N---------GAFDFLLKP 113
Query: 132 LSEDKLRNLWQHVVHK 147
+ ++L N+WQH+ K
Sbjct: 114 VRIEELSNIWQHIFRK 129
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 198 (74.8 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 36/62 (58%), Positives = 50/62 (80%)
Query: 327 NRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRR 386
N KK +V W+ ELH++FV AV +LG+D+A+P RILELM V GL+R NVASHLQK+R++ +
Sbjct: 197 NSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLK 256
Query: 387 HI 388
+
Sbjct: 257 RL 258
Score = 130 (50.8 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
FP GLR+L++D D+S L+ L + Y V+ + AL+ ++ ++F + + +V
Sbjct: 7 FPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHM 66
Query: 74 SNTDGSFKFLETA----KDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEFLR 129
+G + L+ DLP I+ S +T+M I N+ GA ++L
Sbjct: 67 PGMNG-YNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGI----------NH---GACDYLI 112
Query: 130 KPLSEDKLRNLWQHVVHK 147
KP+ ++L+N+WQHVV +
Sbjct: 113 KPIRPEELKNIWQHVVRR 130
Score = 38 (18.4 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 322 CGNKANRKKMKVD 334
C NK +KK VD
Sbjct: 171 CRNKKKKKKRSVD 183
>TAIR|locus:2155954 [details] [associations]
symbol:APRR4 "pseudo-response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AB016872 IPI:IPI00535768 RefSeq:NP_199735.1
UniGene:At.55447 ProteinModelPortal:Q9FJ16 SMR:Q9FJ16
EnsemblPlants:AT5G49240.1 GeneID:834984 KEGG:ath:AT5G49240
GeneFarm:4344 TAIR:At5g49240 eggNOG:NOG265546 HOGENOM:HOG000029456
InParanoid:Q9FJ16 KO:K14491 OMA:SEIGSEM PhylomeDB:Q9FJ16
ProtClustDB:CLSN2916474 Genevestigator:Q9FJ16 GermOnline:AT5G49240
Uniprot:Q9FJ16
Length = 292
Score = 168 (64.2 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 39/116 (33%), Positives = 64/116 (55%)
Query: 267 KPQRPRETIVKEEHDPTNGSKTECNMLPLPYEKDNLKGSNCV---IENPSKASGLQNSCG 323
K R R ++V E + G K+ + K S+C+ + + +C
Sbjct: 159 KKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACA 218
Query: 324 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQ 379
+ A KK +V W ELH+ F+ AV+ LG+++A+P +IL++MKV+ ++R NVASHLQ
Sbjct: 219 SSA--KKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
Score = 138 (53.6 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 45/140 (32%), Positives = 75/140 (53%)
Query: 13 DFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNE-NEALSAFSDKPENFHVAIVEV 71
+FP+GLRVL+ D+D S L+ L+ Y V T NE N+A+ + F +A+++V
Sbjct: 37 NFPEGLRVLVFDEDPSYLLILERHLQKFQYQV-TICNEVNKAMHTLRNHRNRFDLAMIQV 95
Query: 72 TTSNTDGS-FKFLE---TAKDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEF 127
+N +G F+FL + DLP II S + ++ K ++N GA ++
Sbjct: 96 --NNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKK----WMIN---------GAADY 140
Query: 128 LRKPLSEDKLRNLWQHVVHK 147
L KP+ + LR +++H+V K
Sbjct: 141 LIKPIRPEDLRIVFKHLVKK 160
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 170 (64.9 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 35/62 (56%), Positives = 46/62 (74%)
Query: 324 NKANRKKMKVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYR 382
+ ++ KK +V W+ ELH KFV AV Q+G D +A P +IL+LM V LTR NVASHLQKYR
Sbjct: 187 SSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYR 246
Query: 383 MH 384
++
Sbjct: 247 LY 248
Score = 136 (52.9 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 44/136 (32%), Positives = 67/136 (49%)
Query: 15 PKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTS 74
P GLRVL++D D + L+ L+ Y V+T EAL ++ + + + I +V
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 75 NTDGSFKFLETAK---DLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEFLRKP 131
+ DG FK LE DLP I+ S S +MK + Q GA ++L KP
Sbjct: 68 DMDG-FKLLEHVGLELDLPVIMMSVDGETSRVMKGV-------------QHGACDYLLKP 113
Query: 132 LSEDKLRNLWQHVVHK 147
+ +L+ +WQHV+ K
Sbjct: 114 IRMKELKIIWQHVLRK 129
>TAIR|locus:2148348 [details] [associations]
symbol:BOA "AT5G59570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009909 "regulation of flower development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB025604
GO:GO:0009909 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT026065 EMBL:AK117348
EMBL:AB206577 IPI:IPI00538187 RefSeq:NP_200765.1 UniGene:At.29219
ProteinModelPortal:Q9LTH4 SMR:Q9LTH4 STRING:Q9LTH4
EnsemblPlants:AT5G59570.1 GeneID:836076 KEGG:ath:AT5G59570
TAIR:At5g59570 InParanoid:Q9LTH4 OMA:ERSRTIH PhylomeDB:Q9LTH4
ProtClustDB:CLSN2685121 Genevestigator:Q9LTH4 Uniprot:Q9LTH4
Length = 298
Score = 207 (77.9 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 44/100 (44%), Positives = 63/100 (63%)
Query: 316 SGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVA 375
SG +++ G + R ++ WTP+LHK+FV V LG+ A+P I++LM VEGLTR NVA
Sbjct: 129 SGPEDASGKTSKRPRLV--WTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVA 186
Query: 376 SHLQKYRMHRRHI--LPKEDDRKWPHARDQMLRNYYPHKP 413
SHLQKYR++ + I L E+D P++ L + P P
Sbjct: 187 SHLQKYRLYLKRIQGLTTEED---PYSSSDQLFSSTPVPP 223
Score = 49 (22.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 476 GCPVMPLPNG-PYSSF--PQGASGYH----NSGVDDNSYAMPQN 512
G PV P+P+ P + G GY+ N G + N Y M QN
Sbjct: 237 GVPV-PVPSMVPIPGYGNQMGMQGYYQQYSNHGNESNQYMMQQN 279
>TAIR|locus:2058445 [details] [associations]
symbol:MYBC1 "AT2G40970" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004261
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002409 EMBL:AY072381
EMBL:BT000098 IPI:IPI00539516 PIR:T00761 RefSeq:NP_181630.1
UniGene:At.27776 ProteinModelPortal:O22210 SMR:O22210
EnsemblPlants:AT2G40970.1 GeneID:818697 KEGG:ath:AT2G40970
TAIR:At2g40970 eggNOG:NOG255246 HOGENOM:HOG000238691
InParanoid:O22210 OMA:RYEDSEY PhylomeDB:O22210
ProtClustDB:CLSN2913178 ArrayExpress:O22210 Genevestigator:O22210
Uniprot:O22210
Length = 248
Score = 197 (74.4 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 321 SCGNKANR--KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHL 378
S G + R K+ ++ WTP+LHK+FV AV LG+ A+P I++LM VEGLTR NVASHL
Sbjct: 94 SIGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHL 153
Query: 379 QKYRMHRRHI 388
QKYR++ R +
Sbjct: 154 QKYRLYLRRM 163
>TAIR|locus:2175364 [details] [associations]
symbol:AT5G05090 "AT5G05090" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AB005245 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY093188
EMBL:BT006289 IPI:IPI00523871 RefSeq:NP_196128.1 UniGene:At.33034
ProteinModelPortal:Q9FF65 SMR:Q9FF65 PRIDE:Q9FF65
EnsemblPlants:AT5G05090.1 GeneID:830391 KEGG:ath:AT5G05090
TAIR:At5g05090 InParanoid:Q9FF65 OMA:MREEDSN PhylomeDB:Q9FF65
ProtClustDB:CLSN2716677 ArrayExpress:Q9FF65 Genevestigator:Q9FF65
Uniprot:Q9FF65
Length = 266
Score = 195 (73.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 313 SKASGLQNSCGNKANR--KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLT 370
S A +S G++ R K+ ++ WTP+LHK+FV AV LG+ A+P I++LM V+GLT
Sbjct: 62 SSAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLT 121
Query: 371 RHNVASHLQKYRMHRRHI 388
R NVASHLQKYR++ + +
Sbjct: 122 RENVASHLQKYRLYLKRM 139
>TAIR|locus:2103247 [details] [associations]
symbol:AT3G10760 "AT3G10760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AC011708 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000238691 ProtClustDB:CLSN2716677
IPI:IPI00530545 RefSeq:NP_187687.1 UniGene:At.39869
ProteinModelPortal:Q9SG82 SMR:Q9SG82 PRIDE:Q9SG82
EnsemblPlants:AT3G10760.1 GeneID:820245 KEGG:ath:AT3G10760
TAIR:At3g10760 eggNOG:NOG312708 InParanoid:Q9SG82 OMA:FARWEEE
PhylomeDB:Q9SG82 Genevestigator:Q9SG82 Uniprot:Q9SG82
Length = 335
Score = 197 (74.4 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 41/100 (41%), Positives = 63/100 (63%)
Query: 291 NMLPLPYEKDNLKGSNCVIENPSKASGLQNSCGNKANR--KKMKVDWTPELHKKFVQAVE 348
+ L LP + N + ++ SG + G++ R K+ ++ WTP+LHK+FV AV
Sbjct: 67 SQLQLPSSQAN-SSAEFAADSADLGSG--GAAGDEPARTLKRPRLVWTPQLHKRFVDAVA 123
Query: 349 QLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 388
LG+ A+P I++LM V+GLTR NVASHLQKYR++ + +
Sbjct: 124 HLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM 163
>TAIR|locus:2063746 [details] [associations]
symbol:AT2G03500 "AT2G03500" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006284
HOGENOM:HOG000237574 EMBL:AY060559 EMBL:AY133630 EMBL:AK221662
IPI:IPI00544167 PIR:B84449 RefSeq:NP_027544.1 UniGene:At.27373
ProteinModelPortal:Q9ZQ85 SMR:Q9ZQ85 IntAct:Q9ZQ85
EnsemblPlants:AT2G03500.1 GeneID:814878 KEGG:ath:AT2G03500
TAIR:At2g03500 eggNOG:NOG301728 InParanoid:Q9ZQ85 OMA:QSYSMLL
PhylomeDB:Q9ZQ85 ProtClustDB:CLSN2687945 ArrayExpress:Q9ZQ85
Genevestigator:Q9ZQ85 Uniprot:Q9ZQ85
Length = 432
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 55/153 (35%), Positives = 86/153 (56%)
Query: 239 ESAEQDGESKFVETTCGNSIAEGTLQEDKPQRPRETIVKEEHDPTNGSKTECNMLPLPYE 298
++ +++G F+ + S+ E L + +R T EH TNG + N +
Sbjct: 155 DAKQRNGSGAFLPFSKEQSLPELALSTEV-KRVSPT---NEH--TNGQ--DGNDESMINN 206
Query: 299 KDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQ-AIP 357
+N +N N S ++G+ +S +++NRK + W+P+LH++FVQA++ LG Q A P
Sbjct: 207 DNNYNNNN---NNNSNSNGV-SSTTSQSNRKARRC-WSPDLHRRFVQALQMLGGSQVATP 261
Query: 358 SRILELMKVEGLTRHNVASHLQKYRMHRRHILP 390
+I ELMKV+GLT V SHLQKYR+H R P
Sbjct: 262 KQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSP 294
>TAIR|locus:2085984 [details] [associations]
symbol:AT3G25790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
EMBL:AB028607 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237574 ProtClustDB:CLSN2687791 IPI:IPI00546166
RefSeq:NP_566778.1 UniGene:At.37325 ProteinModelPortal:Q9LS00
SMR:Q9LS00 EnsemblPlants:AT3G25790.1 GeneID:822170
KEGG:ath:AT3G25790 TAIR:At3g25790 InParanoid:Q9LS00 OMA:AYKREIS
PhylomeDB:Q9LS00 Genevestigator:Q9LS00 Uniprot:Q9LS00
Length = 357
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 53/175 (30%), Positives = 87/175 (49%)
Query: 220 GRLLDDIDCQDNTNFSTEKESAEQDG---ESKFVETTCG---NSIAEGTLQEDKPQRPRE 273
GR+LD +++ S E+E ++D E + ET ++ L+ + +
Sbjct: 80 GRILDLFIPIKHSSTSIEEEVDDKDDDDEEHQSHETDIDFDDKNMKSEWLKSVQLWNQSD 139
Query: 274 TIVKEEHDPTNGSKTECNMLPLPYEKDNLKGSNCVIENPSKAS-GLQNSCGNKANRKKMK 332
+V + KTE ++ L D N I++P S G G + ++K +
Sbjct: 140 AVVSNNRQDRSQEKTE-TLVELIKINDEAAKKNNNIKSPVTTSDGGSGGGGGRRGQRKNR 198
Query: 333 VDWTPELHKKFVQAVEQLGVDQ-AIPSRILELMKVEGLTRHNVASHLQKYRMHRR 386
W+ ELH++F+ A++QLG A P +I ++MKV+GLT V SHLQKYR+H R
Sbjct: 199 RCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTNDEVKSHLQKYRLHAR 253
>TAIR|locus:2045761 [details] [associations]
symbol:AT2G01060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006837
EMBL:AF370550 EMBL:AY084725 EMBL:BT000013 IPI:IPI00544604
PIR:B84420 RefSeq:NP_178216.1 UniGene:At.24449
ProteinModelPortal:Q9SJW0 SMR:Q9SJW0 EnsemblPlants:AT2G01060.1
GeneID:814630 KEGG:ath:AT2G01060 TAIR:At2g01060 eggNOG:NOG329415
InParanoid:Q9SJW0 OMA:TNELHER PhylomeDB:Q9SJW0
ProtClustDB:CLSN2683513 ArrayExpress:Q9SJW0 Genevestigator:Q9SJW0
Uniprot:Q9SJW0
Length = 286
Score = 159 (61.0 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 320 NSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHL 378
N N ++ K ++ WT ELH++FV AV QLG D+A P +L +M V+GLT ++V SHL
Sbjct: 5 NGGPNSSHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHL 64
Query: 379 QKYRM 383
QKYR+
Sbjct: 65 QKYRL 69
Score = 49 (22.3 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 495 SGYHNSGVDDNSYAMPQNSVDLHPAEEVIDKV 526
+ YH S D+ A Q S L AEE +DKV
Sbjct: 253 TSYHQS---DHVLAFDQPSTSLLGAEEQLDKV 281
>TAIR|locus:2031210 [details] [associations]
symbol:AT1G25550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237574
ProtClustDB:CLSN2687960 EMBL:AF326890 EMBL:AF339707 EMBL:AF372906
EMBL:BT002674 IPI:IPI00533337 RefSeq:NP_564236.1 UniGene:At.25159
ProteinModelPortal:Q9FPE8 SMR:Q9FPE8 IntAct:Q9FPE8 STRING:Q9FPE8
PRIDE:Q9FPE8 EnsemblPlants:AT1G25550.1 GeneID:839142
KEGG:ath:AT1G25550 TAIR:At1g25550 InParanoid:Q9FPE8 OMA:ECSERTT
PhylomeDB:Q9FPE8 ArrayExpress:Q9FPE8 Genevestigator:Q9FPE8
Uniprot:Q9FPE8
Length = 344
Score = 170 (64.9 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 326 ANRKKMKVDWTPELHKKFVQAVEQLGVDQ-AIPSRILELMKVEGLTRHNVASHLQKYRMH 384
+NRK+ + W+PELH++F+ A++QLG A P +I +LMKV+GLT V SHLQKYR+H
Sbjct: 206 SNRKQRRC-WSPELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLH 264
Query: 385 RR 386
R
Sbjct: 265 TR 266
>TAIR|locus:2089260 [details] [associations]
symbol:AT3G13040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY050889 EMBL:AY096674
IPI:IPI00543771 RefSeq:NP_566442.1 RefSeq:NP_974298.1
UniGene:At.11993 ProteinModelPortal:Q949U2 SMR:Q949U2 STRING:Q949U2
PRIDE:Q949U2 EnsemblPlants:AT3G13040.1 EnsemblPlants:AT3G13040.2
GeneID:820490 KEGG:ath:AT3G13040 OMA:RIEEHAK
ProtClustDB:CLSN2688327 ArrayExpress:Q949U2 Genevestigator:Q949U2
Uniprot:Q949U2
Length = 449
Score = 172 (65.6 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 36/86 (41%), Positives = 62/86 (72%)
Query: 321 SCGNKANRKKMKVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQ 379
S G+ AN+K ++ WTPELH+ FV+AV +L G ++A P + +LM VEGLT ++V SHLQ
Sbjct: 233 SPGSAANQKS-RMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKSHLQ 291
Query: 380 KYRMHRRHILPKEDDRKWPHARDQML 405
KYR+ +++ K+++++ ++ ++ L
Sbjct: 292 KYRL-AKYMPEKKEEKRTDNSEEKKL 316
>TAIR|locus:2115070 [details] [associations]
symbol:AT4G37180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00537470
RefSeq:NP_849513.1 UniGene:At.4657 ProteinModelPortal:F4JRB0
SMR:F4JRB0 PRIDE:F4JRB0 EnsemblPlants:AT4G37180.2 GeneID:829872
KEGG:ath:AT4G37180 OMA:SCRNDET Uniprot:F4JRB0
Length = 363
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 320 NSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQ-AIPSRILELMKVEGLTRHNVASHL 378
+S + +K+ + W+ ELH+KFV A+ +LG Q A P +I +LMKV+GLT V SHL
Sbjct: 207 SSQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHL 266
Query: 379 QKYRMH-RRHIL 389
QKYRMH R+H L
Sbjct: 267 QKYRMHIRKHPL 278
>TAIR|locus:2038957 [details] [associations]
symbol:AT2G20400 "AT2G20400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006119
EMBL:AK118313 IPI:IPI00521384 RefSeq:NP_179630.2 UniGene:At.43867
ProteinModelPortal:Q8GXC2 SMR:Q8GXC2 PaxDb:Q8GXC2 PRIDE:Q8GXC2
EnsemblPlants:AT2G20400.1 GeneID:816559 KEGG:ath:AT2G20400
TAIR:At2g20400 eggNOG:NOG265443 HOGENOM:HOG000064669
InParanoid:Q8GXC2 OMA:ANSMENR PhylomeDB:Q8GXC2
ProtClustDB:CLSN2918042 Genevestigator:Q8GXC2 Uniprot:Q8GXC2
Length = 397
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 45/103 (43%), Positives = 58/103 (56%)
Query: 305 SNCVIENP-----SKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIPS 358
S+CV P S S ++ N A K ++ WTPELH+ FV AV QLG ++A P
Sbjct: 201 SSCVELRPLDRTVSSNSNNNSNSNNAAAAAKGRMRWTPELHEVFVDAVNQLGGSNEATPK 260
Query: 359 RILELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPHAR 401
+L+ MKVEGLT +V SHLQKYR + +P E P AR
Sbjct: 261 GVLKHMKVEGLTIFHVKSHLQKYRTAKYIPVPSEGS---PEAR 300
>TAIR|locus:2063141 [details] [associations]
symbol:AT2G40260 "AT2G40260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC007020
HOGENOM:HOG000090767 IPI:IPI00530168 PIR:C84827 RefSeq:NP_181555.1
UniGene:At.53083 ProteinModelPortal:Q9SIZ5 SMR:Q9SIZ5 PRIDE:Q9SIZ5
EnsemblPlants:AT2G40260.1 GeneID:818618 KEGG:ath:AT2G40260
TAIR:At2g40260 eggNOG:NOG267620 InParanoid:Q9SIZ5 OMA:FRINSHE
PhylomeDB:Q9SIZ5 ProtClustDB:CLSN2913060 ArrayExpress:Q9SIZ5
Genevestigator:Q9SIZ5 Uniprot:Q9SIZ5
Length = 410
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 240 SAEQDGESKFVETTCGNSIAEGTL-QEDKPQRPRETIVKEEHDPTNGSKTECNMLPLPYE 298
S+ Q+ E+ +T N+I T +EDK + E ++E + + N YE
Sbjct: 3 SSSQNSENS--KTCLSNNIKATTKNEEDKDEEDDEEGEEDEEERSGDQSPSSNS----YE 56
Query: 299 KDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIP 357
+++ GS+ +N ++ N++ +++ WTPELH F+QAVE+LG D+A P
Sbjct: 57 EES--GSHHHDQNKKNGGSVRPY--NRSKTPRLR--WTPELHICFLQAVERLGGPDRATP 110
Query: 358 SRILELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDR 395
+L+LM V+GL+ +V SHLQ YR + P E D+
Sbjct: 111 KLVLQLMNVKGLSIAHVKSHLQMYRSKKTDE-PNEGDQ 147
>TAIR|locus:2139865 [details] [associations]
symbol:PHR1 "phosphate starvation response 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IMP] [GO:0055063 "sulfate ion homeostasis" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IEP] [GO:0071486 "cellular
response to high light intensity" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016036 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0071486
HOGENOM:HOG000064669 EMBL:AY081290 EMBL:BT002187 EMBL:AJ310799
IPI:IPI00520685 RefSeq:NP_194590.2 UniGene:At.4525
ProteinModelPortal:Q94CL7 SMR:Q94CL7 PaxDb:Q94CL7 PRIDE:Q94CL7
EnsemblPlants:AT4G28610.1 GeneID:828979 KEGG:ath:AT4G28610
TAIR:At4g28610 eggNOG:NOG275307 InParanoid:Q94CL7 OMA:EKQCKSG
PhylomeDB:Q94CL7 ProtClustDB:CLSN2915055 Genevestigator:Q94CL7
GO:GO:0055063 Uniprot:Q94CL7
Length = 409
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 388
K ++ WTPELH+ FV+AV LG ++A P +L++MKVEGLT ++V SHLQKYR R
Sbjct: 225 KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARYRP 284
Query: 389 LPKE 392
P E
Sbjct: 285 EPSE 288
>TAIR|locus:2199342 [details] [associations]
symbol:APRR6 "pseudo-response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC016447 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557 KO:K14491
IPI:IPI00522591 IPI:IPI01020037 PIR:E96705 RefSeq:NP_176988.4
UniGene:At.52431 ProteinModelPortal:Q9C9F6 SMR:Q9C9F6 PaxDb:Q9C9F6
PRIDE:Q9C9F6 GeneID:843150 KEGG:ath:AT1G68210 GeneFarm:4346
TAIR:At1g68210 eggNOG:NOG320519 OMA:IANIEMP Genevestigator:Q9C9F6
Uniprot:Q9C9F6
Length = 755
Score = 125 (49.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 35/105 (33%), Positives = 47/105 (44%)
Query: 312 PSKASGLQNSCGN-KANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLT 370
PS A ++N K + + K W E H KF+ A+ LG + P ILE+M LT
Sbjct: 203 PSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLT 262
Query: 371 RHNVASHLQKYRMHRRHI---LPKEDDRKWPHARDQMLRNYYPHK 412
V SHLQKY+ I LP+ + R + YP K
Sbjct: 263 HRQVGSHLQKYKAQIDQISYTLPRNESRSIDKTFEYPSNYKYPFK 307
Score = 89 (36.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/132 (25%), Positives = 58/132 (43%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
+ +LL+D D+++ A L L+ V + ++ALS + + + I + + D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 78 GSFKFLETA--KDLPTIITSNIHCLSTMMKCIAIMVMNQLFDNNFQLGAVEFLRKPLSED 135
S FL KD+P I+ + + T ++ F L KP+S D
Sbjct: 73 -SHSFLNALLLKDIPLILINPE--IKTKEPS-DLLTKRACFS----------LDKPISND 118
Query: 136 KLRNLWQHVVHK 147
++N+WQHV K
Sbjct: 119 DIKNMWQHVFSK 130
>TAIR|locus:2026863 [details] [associations]
symbol:AT1G68670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0009737 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY063886
EMBL:AY091241 IPI:IPI00541260 RefSeq:NP_564938.1 UniGene:At.27154
ProteinModelPortal:Q8VZS3 SMR:Q8VZS3 IntAct:Q8VZS3
EnsemblPlants:AT1G68670.1 GeneID:843197 KEGG:ath:AT1G68670
TAIR:At1g68670 HOGENOM:HOG000237574 InParanoid:Q8VZS3 OMA:EHESSPE
PhylomeDB:Q8VZS3 ProtClustDB:CLSN2687960 ArrayExpress:Q8VZS3
Genevestigator:Q8VZS3 Uniprot:Q8VZS3
Length = 354
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 319 QNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQ-AIPSRILELMKVEGLTRHNVASH 377
Q + +RK+ + W+PELH++F+ A++QLG A P +I + MKV+GLT V SH
Sbjct: 205 QQQSQSHTHRKQRRC-WSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSH 263
Query: 378 LQKYRMHRR 386
LQKYR+H R
Sbjct: 264 LQKYRLHTR 272
>TAIR|locus:2148720 [details] [associations]
symbol:PHL1 "AT5G29000" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AC018632 EMBL:BT002344 EMBL:AY085154 IPI:IPI00527102
IPI:IPI00527253 IPI:IPI00891441 RefSeq:NP_001078629.1
RefSeq:NP_001119299.1 RefSeq:NP_568512.3 RefSeq:NP_851090.1
UniGene:At.26183 ProteinModelPortal:Q8GUN5 SMR:Q8GUN5 PRIDE:Q8GUN5
EnsemblPlants:AT5G29000.2 GeneID:833026 KEGG:ath:AT5G29000
TAIR:At5g29000 eggNOG:NOG275266 InParanoid:Q8GUN5 OMA:DSSSHNP
PhylomeDB:Q8GUN5 ProtClustDB:CLSN2680328 Genevestigator:Q8GUN5
Uniprot:Q8GUN5
Length = 413
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 280 HDPTNGSKTECNMLPLPYEKDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPEL 339
H+P + T L +P ++ + + SG +NS + A K+ ++ WTPEL
Sbjct: 185 HNPNSEIPTP--FLDVPRLDITANQQQQMVSSEDQLSG-RNSSSSVATSKQ-RMRWTPEL 240
Query: 340 HKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 385
H+ FV+AV QLG ++A P +L+L+ GLT ++V SHLQKYR R
Sbjct: 241 HEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTAR 287
>TAIR|locus:2010297 [details] [associations]
symbol:AT1G49560 "AT1G49560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011807 EMBL:AK221631
IPI:IPI00546952 PIR:B96532 RefSeq:NP_564549.1 UniGene:At.38204
ProteinModelPortal:Q9FX84 SMR:Q9FX84 EnsemblPlants:AT1G49560.1
GeneID:841380 KEGG:ath:AT1G49560 TAIR:At1g49560 InParanoid:Q9FX84
OMA:SSMEDVE PhylomeDB:Q9FX84 ProtClustDB:CLSN2917204
Genevestigator:Q9FX84 Uniprot:Q9FX84
Length = 333
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/83 (43%), Positives = 50/83 (60%)
Query: 305 SNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILEL 363
SN + + P+ A Q + + +K + W PELH++FV A++QLG A P +I E
Sbjct: 167 SNSMPQPPTPAVPQQPAFLKQQALRKQRRCWNPELHRRFVDALQQLGGPGVATPKQIREH 226
Query: 364 MKVEGLTRHNVASHLQKYRMHRR 386
M+ EGLT V SHLQKYR+H R
Sbjct: 227 MQEEGLTNDEVKSHLQKYRLHIR 249
>TAIR|locus:2095933 [details] [associations]
symbol:MYR2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011698
ProtClustDB:CLSN2686543 IPI:IPI00524229 RefSeq:NP_001118567.1
UniGene:At.40915 ProteinModelPortal:Q9SQQ9 SMR:Q9SQQ9
EnsemblPlants:AT3G04030.3 GeneID:819558 KEGG:ath:AT3G04030
TAIR:At3g04030 InParanoid:Q9SQQ9 OMA:HITSERH PhylomeDB:Q9SQQ9
Genevestigator:Q9SQQ9 Uniprot:Q9SQQ9
Length = 394
Score = 156 (60.0 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 27/57 (47%), Positives = 44/57 (77%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 385
K ++ WTP+LH++F++AV QLG D+A P I+++M + GLT +++ SHLQKYR+ +
Sbjct: 45 KPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSK 101
>TAIR|locus:2204518 [details] [associations]
symbol:AT1G14600 "AT1G14600" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010657 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AJ630486 EMBL:AY568658
IPI:IPI00523105 RefSeq:NP_172912.3 UniGene:At.41962
ProteinModelPortal:Q700D9 SMR:Q700D9 EnsemblPlants:AT1G14600.1
GeneID:838022 KEGG:ath:AT1G14600 TAIR:At1g14600 eggNOG:NOG329381
HOGENOM:HOG000239342 InParanoid:Q700D9 OMA:NIMNMER
Genevestigator:Q700D9 Uniprot:Q700D9
Length = 255
Score = 150 (57.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 332 KVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 390
++ WTPELH+ FV AV+ LG +A P +L++M V+GLT +V SHLQ YR R +L
Sbjct: 25 RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLG 84
Query: 391 KEDDRKWPHAR 401
K ++ P +R
Sbjct: 85 KPEESSSPSSR 95
>TAIR|locus:2172394 [details] [associations]
symbol:MYR1 "myb-related protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB012246
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00538966 RefSeq:NP_197325.1 RefSeq:NP_974798.1
UniGene:At.7556 ProteinModelPortal:Q9FK47 SMR:Q9FK47
EnsemblPlants:AT5G18240.1 EnsemblPlants:AT5G18240.4 GeneID:831942
KEGG:ath:AT5G18240 TAIR:At5g18240 InParanoid:Q9FK47 OMA:LETHTRT
PhylomeDB:Q9FK47 ProtClustDB:CLSN2686543 Genevestigator:Q9FK47
Uniprot:Q9FK47
Length = 402
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 28/57 (49%), Positives = 44/57 (77%)
Query: 330 KMKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 385
K ++ WTP+LH++FV+AV QLG D+A P I+++M + GLT +++ SHLQKYR+ +
Sbjct: 45 KPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSK 101
>TAIR|locus:2170199 [details] [associations]
symbol:AT5G06800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AK226644 IPI:IPI00528070
RefSeq:NP_196298.2 UniGene:At.50439 ProteinModelPortal:Q0WVU3
SMR:Q0WVU3 PRIDE:Q0WVU3 EnsemblPlants:AT5G06800.1 GeneID:830570
KEGG:ath:AT5G06800 TAIR:At5g06800 eggNOG:NOG298644
HOGENOM:HOG000241107 InParanoid:Q0WVU3 OMA:MDNINFE
ProtClustDB:CLSN2918619 Genevestigator:Q0WVU3 Uniprot:Q0WVU3
Length = 375
Score = 145 (56.1 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 388
K ++ WT +LH+KFV+ V +LG D+A P IL+ M +GLT +V SHLQKYR+ +
Sbjct: 192 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAK--Y 249
Query: 389 LPKEDDRKW 397
+P+ + K+
Sbjct: 250 MPESQEGKF 258
Score = 50 (22.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 194 PQQSDNEQSVPNDKYPAPSTPQLKQGGRLLDDIDCQDNTNFSTEKESAE 242
P Q N Q + +Y PS+P + L DC N +F + S++
Sbjct: 24 PPQPFNLQDLNMIQYNQPSSPWTTETFSGLTPYDCTANQSFPVQCSSSK 72
>TAIR|locus:2119425 [details] [associations]
symbol:UNE16 "unfertilized embryo sac 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009567 "double fertilization forming a
zygote and endosperm" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009567
IPI:IPI00657591 RefSeq:NP_001031626.1 UniGene:At.22199
ProteinModelPortal:F4JTR5 SMR:F4JTR5 PRIDE:F4JTR5
EnsemblPlants:AT4G13640.2 GeneID:826998 KEGG:ath:AT4G13640
OMA:LPIDACL PhylomeDB:F4JTR5 Uniprot:F4JTR5
Length = 295
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 388
K ++ WT ELH++FV AV QLG D+A P I+ M V+GLT +++ SHLQK+R+ R+
Sbjct: 37 KPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSC 96
Query: 389 LPKEDDRK 396
D+ K
Sbjct: 97 KESIDNSK 104
>TAIR|locus:2100880 [details] [associations]
symbol:AT3G04450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00540345 RefSeq:NP_187095.2 UniGene:At.40835
ProteinModelPortal:F4J3P7 SMR:F4J3P7 PRIDE:F4J3P7
EnsemblPlants:AT3G04450.1 GeneID:819601 KEGG:ath:AT3G04450
OMA:WPDWADQ Uniprot:F4J3P7
Length = 442
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 385
K ++ WTPELH+ FV+A+ QLG ++A P +L+L+ GLT ++V SHLQKYR R
Sbjct: 238 KQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKSHLQKYRTAR 294
>TAIR|locus:2093726 [details] [associations]
symbol:AT3G24120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00531757
RefSeq:NP_974356.1 UniGene:At.26588 ProteinModelPortal:F4J5D9
SMR:F4J5D9 EnsemblPlants:AT3G24120.2 GeneID:821998
KEGG:ath:AT3G24120 OMA:NLPGDAC PhylomeDB:F4J5D9 Uniprot:F4J5D9
Length = 298
Score = 145 (56.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 29/58 (50%), Positives = 42/58 (72%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRR 386
K ++ WT ELH++FV AV QLG D+A P I+ M V+GLT +++ SHLQK+R+ R+
Sbjct: 41 KPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQ 98
>TAIR|locus:2205339 [details] [associations]
symbol:HRS1 "HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY
ROOT SHORTENING 1" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016036 "cellular response to
phosphate starvation" evidence=IMP] [GO:0080022 "primary root
development" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC011810
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0080022 GO:GO:0016036 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237574 EMBL:AF367336 EMBL:AY124865
IPI:IPI00529437 PIR:F86267 RefSeq:NP_563926.1 UniGene:At.20366
ProteinModelPortal:Q9FX67 SMR:Q9FX67 STRING:Q9FX67
EnsemblPlants:AT1G13300.1 GeneID:837890 KEGG:ath:AT1G13300
TAIR:At1g13300 eggNOG:NOG274505 InParanoid:Q9FX67 OMA:TRDESMR
PhylomeDB:Q9FX67 ProtClustDB:CLSN2687791 Genevestigator:Q9FX67
Uniprot:Q9FX67
Length = 344
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 329 KKMKVDWTPELHKKFVQAVEQLGVDQ-AIPSRILELMKVEGLTRHNVASHLQKYRMHRR 386
+K + W+ +LH++F+ A++ LG A P +I E MKV+GLT V SHLQKYR+H R
Sbjct: 180 RKQRRCWSSQLHRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTR 238
>TAIR|locus:2051572 [details] [associations]
symbol:AT2G06020 "AT2G06020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 EMBL:AC006413 IPI:IPI00525998 PIR:C84474
RefSeq:NP_178659.1 UniGene:At.52657 ProteinModelPortal:Q9ZPZ8
SMR:Q9ZPZ8 EnsemblPlants:AT2G06020.1 GeneID:815156
KEGG:ath:AT2G06020 TAIR:At2g06020 eggNOG:NOG275517
HOGENOM:HOG000154034 OMA:SKITPCI PhylomeDB:Q9ZPZ8
ProtClustDB:CLSN2912993 ArrayExpress:Q9ZPZ8 Genevestigator:Q9ZPZ8
Uniprot:Q9ZPZ8
Length = 301
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 298 EKDNLKGSNCV-IENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQA 355
EK+ + + V IE + +S C + +K ++ W+ +LH FV AVE+LG ++A
Sbjct: 53 EKNTKENAEKVGIEEGNGSSSKITPCIFYTSDEKARLRWSSDLHDCFVNAVEKLGGPNKA 112
Query: 356 IPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 388
P + E M+VEG+ H+V SHLQK+R+ + +I
Sbjct: 113 TPKSVKEAMEVEGIALHHVKSHLQKFRLGKCNI 145
>TAIR|locus:2026739 [details] [associations]
symbol:AT1G69580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 EMBL:AC021046 IPI:IPI00846148
RefSeq:NP_001077798.1 UniGene:At.52449 ProteinModelPortal:A8MSE5
SMR:A8MSE5 PRIDE:A8MSE5 EnsemblPlants:AT1G69580.2 GeneID:843294
KEGG:ath:AT1G69580 TAIR:At1g69580 eggNOG:NOG249461 OMA:MEINNNA
PhylomeDB:A8MSE5 ProtClustDB:CLSN2699064 ArrayExpress:A8MSE5
Genevestigator:A8MSE5 Uniprot:A8MSE5
Length = 337
Score = 145 (56.1 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 36/98 (36%), Positives = 55/98 (56%)
Query: 300 DNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIPS 358
+N +N I+N L S K K WT +LH KF++AV QLG ++A P
Sbjct: 9 NNANNTNTTIDNHKAKMSLVLSTDAKPRLK-----WTCDLHHKFIEAVNQLGGPNKATPK 63
Query: 359 RILELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRK 396
++++M++ GLT +++ SHLQKYR+ + K DD K
Sbjct: 64 GLMKVMEIPGLTLYHLKSHLQKYRLGKSM---KFDDNK 98
>TAIR|locus:2125771 [details] [associations]
symbol:AT4G04580 "AT4G04580" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AL161501 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AF074021 IPI:IPI00541303 PIR:G85057
RefSeq:NP_192367.1 UniGene:At.54143 ProteinModelPortal:Q9XEB2
SMR:Q9XEB2 EnsemblPlants:AT4G04580.1 GeneID:825790
KEGG:ath:AT4G04580 TAIR:At4g04580 eggNOG:NOG300503
HOGENOM:HOG000153846 InParanoid:Q9XEB2 OMA:RDLTISH PhylomeDB:Q9XEB2
ProtClustDB:CLSN2915807 ArrayExpress:Q9XEB2 Genevestigator:Q9XEB2
Uniprot:Q9XEB2
Length = 166
Score = 125 (49.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 332 KVDWTPELHKKFVQAVEQLGVDQ-AIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 390
++ WT +L +F+Q +E+LG ++ A P RIL LM V LT +V SHLQ YR ++
Sbjct: 16 RMHWTDDLDIRFIQVIEKLGGEESATPKRILSLMGVRDLTISHVKSHLQMYRNKKKEESS 75
Query: 391 KE 392
KE
Sbjct: 76 KE 77
>TAIR|locus:2157146 [details] [associations]
symbol:AT5G45580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00931042
RefSeq:NP_199371.2 UniGene:At.50506 ProteinModelPortal:F4KEK2
SMR:F4KEK2 PRIDE:F4KEK2 DNASU:834596 EnsemblPlants:AT5G45580.1
GeneID:834596 KEGG:ath:AT5G45580 OMA:YQIEVQR Uniprot:F4KEK2
Length = 264
Score = 142 (55.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRM 383
K ++ WT +LH +FV AV +LG D+A P +L+LM ++GLT +++ SHLQKYR+
Sbjct: 7 KPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYRL 61
>TAIR|locus:2041145 [details] [associations]
symbol:AT2G02060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000239342 EMBL:BT008556 EMBL:BT008699
EMBL:AK229511 IPI:IPI00542007 RefSeq:NP_565281.2 UniGene:At.41520
ProteinModelPortal:Q7X887 SMR:Q7X887 EnsemblPlants:AT2G02060.1
GeneID:814737 KEGG:ath:AT2G02060 TAIR:At2g02060 eggNOG:NOG268656
InParanoid:Q7X887 OMA:WREQEHE ProtClustDB:CLSN2681500
Genevestigator:Q7X887 Uniprot:Q7X887
Length = 256
Score = 141 (54.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 332 KVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHIL- 389
++ WTP+LH+ FV AVE LG +A P +L++M V+GLT +V SHLQ YR + L
Sbjct: 31 RLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQMYRGGSKLTLE 90
Query: 390 -PKEDDRKWPHARDQMLRNYYPH 411
P+E R +YY H
Sbjct: 91 KPEESSSSSIRRRQDSEEDYYLH 113
>TAIR|locus:2206415 [details] [associations]
symbol:APL "ALTERED PHLOEM DEVELOPMENT" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010088 "phloem development"
evidence=IMP] [GO:0010089 "xylem development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010089 EMBL:AC007202 EMBL:AY045662 EMBL:AY143841
EMBL:AK316719 IPI:IPI00538563 IPI:IPI00542908 PIR:D96825
RefSeq:NP_565209.1 RefSeq:NP_849905.1 UniGene:At.23550 HSSP:O49397
ProteinModelPortal:Q9SAK5 SMR:Q9SAK5 IntAct:Q9SAK5 STRING:Q9SAK5
PRIDE:Q9SAK5 EnsemblPlants:AT1G79430.2 GeneID:844281
KEGG:ath:AT1G79430 TAIR:At1g79430 eggNOG:NOG261203
HOGENOM:HOG000239390 InParanoid:Q94AW3 OMA:CQTLAGE PhylomeDB:Q9SAK5
ProtClustDB:CLSN2689327 Genevestigator:Q9SAK5 GO:GO:0010088
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 Uniprot:Q9SAK5
Length = 358
Score = 143 (55.4 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRR 386
K ++ WT ELH++FV AV QLG D+A P I+ +M V+GLT +++ SHLQK+R+ ++
Sbjct: 34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQ 91
>TAIR|locus:2042927 [details] [associations]
symbol:AT2G38300 "AT2G38300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT004973
EMBL:AK117689 IPI:IPI00540370 RefSeq:NP_181364.2 UniGene:At.46670
ProteinModelPortal:Q8GYE4 SMR:Q8GYE4 IntAct:Q8GYE4 STRING:Q8GYE4
PRIDE:Q8GYE4 EnsemblPlants:AT2G38300.1 GeneID:818410
KEGG:ath:AT2G38300 TAIR:At2g38300 eggNOG:NOG310127
HOGENOM:HOG000090767 InParanoid:Q8GYE4 OMA:KDEEDRT PhylomeDB:Q8GYE4
ProtClustDB:CLSN2918908 Genevestigator:Q8GYE4 Uniprot:Q8GYE4
Length = 340
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/130 (33%), Positives = 66/130 (50%)
Query: 305 SNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILEL 363
SN +E K + ++ +K R + WTP+LH +FV+AVE+LG ++A P + ++
Sbjct: 33 SNSTVEESDKKTKVRPYVRSKVPRLR----WTPDLHLRFVRAVERLGGQERATPKLVRQM 88
Query: 364 MKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPHARDQML------RNYYPHKPIMAF 417
M ++GL+ +V SHLQ YR K DD+ A + L RN Y + F
Sbjct: 89 MNIKGLSIAHVKSHLQMYRSK------KIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMF 142
Query: 418 PPYHSNHLVP 427
Y+ NH P
Sbjct: 143 RGYNHNHDSP 152
>TAIR|locus:2087740 [details] [associations]
symbol:AT3G12730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY070764
EMBL:AY143916 IPI:IPI00519091 RefSeq:NP_187879.2 UniGene:At.28330
ProteinModelPortal:Q8VYI2 SMR:Q8VYI2 EnsemblPlants:AT3G12730.1
GeneID:820455 KEGG:ath:AT3G12730 TAIR:At3g12730 eggNOG:NOG317938
InParanoid:Q8VYI2 OMA:CETQEAS PhylomeDB:Q8VYI2
ProtClustDB:CLSN2917937 Genevestigator:Q8VYI2 Uniprot:Q8VYI2
Length = 235
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 330 KMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRM----H 384
K ++ WT ELH++FV AV LG ++A P I+ +M V+GLT +++ SHLQK+R+ H
Sbjct: 23 KPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPH 82
Query: 385 RRH 387
+ H
Sbjct: 83 KEH 85
>TAIR|locus:2041539 [details] [associations]
symbol:AT2G42660 "AT2G42660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006931 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AC007087 EMBL:AY074640 EMBL:AY078938
IPI:IPI00542274 PIR:F84856 RefSeq:NP_181794.1 UniGene:At.37023
ProteinModelPortal:Q9SJJ0 SMR:Q9SJJ0 PaxDb:Q9SJJ0 PRIDE:Q9SJJ0
EnsemblPlants:AT2G42660.1 GeneID:818866 KEGG:ath:AT2G42660
TAIR:At2g42660 eggNOG:NOG258430 HOGENOM:HOG000153491 OMA:NREETVE
PhylomeDB:Q9SJJ0 ProtClustDB:CLSN2913320 ArrayExpress:Q9SJJ0
Genevestigator:Q9SJJ0 Uniprot:Q9SJJ0
Length = 255
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/57 (49%), Positives = 41/57 (71%)
Query: 328 RKKM-KVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYR 382
R M ++ WTP+LH FV+AV++LG D+A P +LE+M ++GL+ +V SHLQ YR
Sbjct: 47 RSNMPRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQMYR 103
>TAIR|locus:2171427 [details] [associations]
symbol:KAN "KANADI" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0009956 "radial pattern formation" evidence=IMP] [GO:0010051
"xylem and phloem pattern formation" evidence=IMP] [GO:0010158
"abaxial cell fate specification" evidence=IMP] [GO:0048440 "carpel
development" evidence=IGI] [GO:0048481 "ovule development"
evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009943 "adaxial/abaxial
axis specification" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB005242 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 PROSITE:PS51293
GO:GO:0010051 GO:GO:0048481 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0009944
GO:GO:0009956 EMBL:AY030192 EMBL:AY037864 EMBL:AY048688
EMBL:BT026436 IPI:IPI00535955 RefSeq:NP_568334.1 UniGene:At.6466
UniGene:At.66763 ProteinModelPortal:Q93WJ9 SMR:Q93WJ9 IntAct:Q93WJ9
STRING:Q93WJ9 PRIDE:Q93WJ9 EnsemblPlants:AT5G16560.1 GeneID:831518
KEGG:ath:AT5G16560 TAIR:At5g16560 eggNOG:NOG330873
HOGENOM:HOG000241649 InParanoid:Q93WJ9 OMA:GINGNEV PhylomeDB:Q93WJ9
ProtClustDB:CLSN2917650 Genevestigator:Q93WJ9 Uniprot:Q93WJ9
Length = 403
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 325 KANRKKMKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 382
K + + ++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 214 KRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 272
>TAIR|locus:2028346 [details] [associations]
symbol:KAN2 "AT1G32240" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048440 "carpel development" evidence=IGI] [GO:0048481 "ovule
development" evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
GO:GO:0048481 EMBL:AC084110 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009944
HOGENOM:HOG000241649 EMBL:AY048689 EMBL:BT029211 EMBL:AB493491
IPI:IPI00539948 RefSeq:NP_564392.1 UniGene:At.25340
ProteinModelPortal:Q9C616 SMR:Q9C616 STRING:Q9C616
EnsemblPlants:AT1G32240.1 GeneID:840116 KEGG:ath:AT1G32240
TAIR:At1g32240 eggNOG:NOG325874 InParanoid:Q9C616 OMA:SDVYENG
PhylomeDB:Q9C616 ProtClustDB:CLSN2715231 Genevestigator:Q9C616
Uniprot:Q9C616
Length = 388
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 325 KANRKKMKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 382
K + + ++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 208 KRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 266
>TAIR|locus:2163852 [details] [associations]
symbol:ATS "AT5G42630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048481 "ovule development" evidence=IMP] [GO:0080060
"integument development" evidence=IGI;IMP] [GO:0005618 "cell wall"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005618 GO:GO:0030154 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212
PROSITE:PS51293 HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0080060 HOGENOM:HOG000241649 EMBL:AB013391
EMBL:AY048691 EMBL:BT026053 IPI:IPI00541325 IPI:IPI00892123
RefSeq:NP_001119363.1 RefSeq:NP_199077.1 UniGene:At.26412
ProteinModelPortal:Q9FJV5 SMR:Q9FJV5 STRING:Q9FJV5
EnsemblPlants:AT5G42630.1 GeneID:834270 KEGG:ath:AT5G42630
TAIR:At5g42630 eggNOG:NOG280455 InParanoid:Q9FJV5 OMA:PQIYGRD
PhylomeDB:Q9FJV5 ProtClustDB:CLSN2916355 Genevestigator:Q9FJV5
Uniprot:Q9FJV5
Length = 276
Score = 123 (48.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 323 GNKANRKKMKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKY 381
G K + + ++ WT LH FV AV+ LG ++A P +LELM V+ LT +V SHLQ Y
Sbjct: 98 GLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMY 157
Query: 382 R 382
R
Sbjct: 158 R 158
>UNIPROTKB|Q0J235 [details] [associations]
symbol:RL9 "Probable transcription factor RL9"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IDA] [GO:0010158 "abaxial cell fate specification"
evidence=IMP] [GO:0010229 "inflorescence development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AP008215 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0010229
eggNOG:NOG330873 HOGENOM:HOG000241649 EMBL:AP005904 EMBL:FJ268747
EMBL:FJ268748 RefSeq:NP_001063097.1 UniGene:Os.5597 PRIDE:Q0J235
GeneID:4346973 KEGG:osa:4346973 Gramene:Q0J235 OMA:DALPWRH
ProtClustDB:CLSN2697690 Uniprot:Q0J235
Length = 532
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 325 KANRKKMKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 382
K + + ++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 319 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 377
>TAIR|locus:505006489 [details] [associations]
symbol:KAN3 "AT4G17695" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:Z97344 HOGENOM:HOG000241649 EMBL:AY048690 IPI:IPI00544036
RefSeq:NP_567535.1 UniGene:At.26411 ProteinModelPortal:Q941I2
SMR:Q941I2 PaxDb:Q941I2 PRIDE:Q941I2 EnsemblPlants:AT4G17695.1
GeneID:827490 KEGG:ath:AT4G17695 TAIR:At4g17695 eggNOG:NOG253351
InParanoid:Q941I2 OMA:SSNENEW PhylomeDB:Q941I2
ProtClustDB:CLSN2917571 Genevestigator:Q941I2 Uniprot:Q941I2
Length = 322
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 332 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 382
++ WT LH FV AV+ LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 166 RMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR 217
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 572 542 0.00095 119 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 631 (67 KB)
Total size of DFA: 349 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.38u 0.11s 53.49t Elapsed: 00:00:02
Total cpu time: 53.38u 0.11s 53.49t Elapsed: 00:00:02
Start: Mon May 20 15:40:54 2013 End: Mon May 20 15:40:56 2013