Query 008258
Match_columns 572
No_of_seqs 360 out of 2459
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 21:56:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008258.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008258hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihg_A RDME; flavoenzyme, anth 100.0 7.8E-49 2.7E-53 429.7 40.5 363 40-432 2-374 (535)
2 2r0c_A REBC; flavin adenine di 100.0 2.4E-48 8.2E-53 426.3 35.9 355 42-431 25-381 (549)
3 2qa1_A PGAE, polyketide oxygen 100.0 3.6E-46 1.2E-50 404.1 38.4 337 41-430 9-348 (500)
4 2qa2_A CABE, polyketide oxygen 100.0 3E-46 1E-50 404.6 37.8 337 41-430 10-349 (499)
5 1pn0_A Phenol 2-monooxygenase; 100.0 1.9E-45 6.5E-50 410.7 36.3 358 41-431 6-423 (665)
6 2dkh_A 3-hydroxybenzoate hydro 100.0 4E-43 1.4E-47 391.3 37.5 351 41-426 30-409 (639)
7 3fmw_A Oxygenase; mithramycin, 100.0 7.5E-43 2.6E-47 383.1 30.6 343 41-431 47-394 (570)
8 4hb9_A Similarities with proba 100.0 2.8E-42 9.5E-47 364.2 22.6 353 44-431 2-384 (412)
9 3rp8_A Flavoprotein monooxygen 100.0 2.6E-38 8.9E-43 334.4 32.0 340 40-431 20-370 (407)
10 3c96_A Flavin-containing monoo 100.0 5.7E-37 1.9E-41 324.5 31.6 343 42-429 3-370 (410)
11 2x3n_A Probable FAD-dependent 100.0 4.4E-38 1.5E-42 331.7 22.6 341 41-431 4-359 (399)
12 1k0i_A P-hydroxybenzoate hydro 100.0 1.9E-37 6.6E-42 326.2 26.8 338 43-429 2-348 (394)
13 2vou_A 2,6-dihydroxypyridine h 100.0 1.6E-37 5.6E-42 327.2 22.9 335 41-431 3-368 (397)
14 2xdo_A TETX2 protein; tetracyc 100.0 3.1E-36 1.1E-40 317.6 24.4 342 41-432 24-386 (398)
15 3oz2_A Digeranylgeranylglycero 100.0 2.6E-34 8.8E-39 301.2 30.5 327 42-418 3-337 (397)
16 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.9E-34 9.8E-39 300.5 29.7 322 42-426 10-345 (379)
17 3e1t_A Halogenase; flavoprotei 100.0 2.6E-32 9E-37 296.8 30.3 350 39-431 3-369 (512)
18 3c4a_A Probable tryptophan hyd 100.0 4.9E-34 1.7E-38 299.0 13.8 324 44-438 1-338 (381)
19 3nix_A Flavoprotein/dehydrogen 100.0 6.1E-31 2.1E-35 278.8 37.7 342 41-420 3-348 (421)
20 3cgv_A Geranylgeranyl reductas 100.0 5E-32 1.7E-36 284.6 27.3 334 42-428 3-347 (397)
21 3atr_A Conserved archaeal prot 100.0 1.2E-31 4.2E-36 287.2 30.4 333 41-426 4-350 (453)
22 3i3l_A Alkylhalidase CMLS; fla 100.0 1.9E-31 6.5E-36 293.1 30.2 347 41-429 21-379 (591)
23 2pyx_A Tryptophan halogenase; 100.0 8E-31 2.7E-35 286.1 22.2 343 42-429 6-413 (526)
24 2gmh_A Electron transfer flavo 100.0 1.5E-28 5.2E-33 270.6 36.1 332 41-416 33-409 (584)
25 2weu_A Tryptophan 5-halogenase 100.0 3.8E-28 1.3E-32 264.2 28.6 336 44-429 3-405 (511)
26 2aqj_A Tryptophan halogenase, 100.0 5.2E-28 1.8E-32 264.6 29.7 338 42-429 4-397 (538)
27 2e4g_A Tryptophan halogenase; 100.0 3.1E-28 1E-32 266.9 26.5 340 41-429 23-428 (550)
28 2bry_A NEDD9 interacting prote 100.0 4.9E-29 1.7E-33 269.6 16.8 310 41-420 90-451 (497)
29 3ihm_A Styrene monooxygenase A 99.9 7.9E-27 2.7E-31 248.1 13.0 321 41-426 20-373 (430)
30 1yvv_A Amine oxidase, flavin-c 99.8 2.2E-17 7.7E-22 168.8 22.7 292 44-398 3-328 (336)
31 2gag_B Heterotetrameric sarcos 99.7 2E-15 6.9E-20 158.3 18.4 216 152-417 171-392 (405)
32 3kkj_A Amine oxidase, flavin-c 99.6 1.3E-14 4.4E-19 142.0 15.3 36 43-78 2-37 (336)
33 1ryi_A Glycine oxidase; flavop 99.6 4E-14 1.4E-18 147.3 15.7 70 150-246 159-229 (382)
34 1y56_B Sarcosine oxidase; dehy 99.5 7.5E-14 2.6E-18 145.3 16.4 69 151-246 145-215 (382)
35 2oln_A NIKD protein; flavoprot 99.4 4.1E-12 1.4E-16 132.9 20.8 66 153-245 151-217 (397)
36 2gf3_A MSOX, monomeric sarcosi 99.4 3E-12 1E-16 133.3 18.7 173 43-244 3-213 (389)
37 3v76_A Flavoprotein; structura 99.4 9.2E-13 3.1E-17 138.7 14.8 144 39-238 23-188 (417)
38 3dme_A Conserved exported prot 99.4 2.4E-12 8.1E-17 132.7 15.9 72 151-246 146-220 (369)
39 3nyc_A D-arginine dehydrogenas 99.4 5.6E-12 1.9E-16 130.7 17.1 69 151-246 150-219 (381)
40 2ywl_A Thioredoxin reductase r 99.4 1.3E-11 4.6E-16 114.1 17.3 118 44-246 2-119 (180)
41 2i0z_A NAD(FAD)-utilizing dehy 99.3 4.7E-12 1.6E-16 134.8 13.9 166 40-246 23-211 (447)
42 1rp0_A ARA6, thiazole biosynth 99.3 2.1E-11 7E-16 121.7 16.0 143 42-243 38-197 (284)
43 3ps9_A TRNA 5-methylaminomethy 99.3 1.8E-11 6E-16 137.2 17.2 70 151-246 413-483 (676)
44 2qcu_A Aerobic glycerol-3-phos 99.3 8.7E-10 3E-14 119.0 29.7 73 151-244 145-219 (501)
45 3da1_A Glycerol-3-phosphate de 99.3 1.7E-10 5.8E-15 126.1 23.6 75 151-246 166-242 (561)
46 3pvc_A TRNA 5-methylaminomethy 99.3 2.3E-11 8E-16 136.4 16.2 70 152-246 409-479 (689)
47 3nlc_A Uncharacterized protein 99.3 8.5E-12 2.9E-16 135.1 11.8 68 155-248 220-292 (549)
48 3jsk_A Cypbp37 protein; octame 99.3 4E-11 1.4E-15 121.5 15.1 143 42-243 78-257 (344)
49 2gqf_A Hypothetical protein HI 99.2 3.9E-11 1.3E-15 125.6 13.8 141 42-237 3-168 (401)
50 3dje_A Fructosyl amine: oxygen 99.2 2.1E-11 7.2E-16 129.2 10.8 62 151-238 157-222 (438)
51 1qo8_A Flavocytochrome C3 fuma 99.2 1E-10 3.4E-15 128.3 14.7 179 40-243 118-318 (566)
52 3c4n_A Uncharacterized protein 99.2 3E-11 1E-15 126.8 9.9 70 151-247 168-248 (405)
53 3nrn_A Uncharacterized protein 99.2 5.3E-10 1.8E-14 117.8 18.1 34 45-78 2-35 (421)
54 2cul_A Glucose-inhibited divis 99.2 6.9E-11 2.4E-15 114.2 10.2 130 43-246 3-134 (232)
55 1y0p_A Fumarate reductase flav 99.2 2.7E-10 9.1E-15 125.1 16.0 177 40-241 123-321 (571)
56 2uzz_A N-methyl-L-tryptophan o 99.2 2.8E-10 9.4E-15 117.7 14.6 60 152-238 146-205 (372)
57 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 4.8E-10 1.7E-14 114.7 15.6 35 44-78 2-39 (342)
58 2zbw_A Thioredoxin reductase; 99.1 2.4E-10 8.4E-15 116.3 13.1 126 41-244 3-128 (335)
59 3ab1_A Ferredoxin--NADP reduct 99.1 2.4E-10 8.1E-15 117.8 12.5 125 41-243 12-137 (360)
60 4a9w_A Monooxygenase; baeyer-v 99.1 2.6E-10 9E-15 116.6 12.4 130 43-238 3-133 (357)
61 3i6d_A Protoporphyrinogen oxid 99.1 2.5E-09 8.7E-14 113.9 20.3 62 43-105 5-87 (470)
62 3ces_A MNMG, tRNA uridine 5-ca 99.1 4.2E-10 1.5E-14 122.9 14.3 152 42-242 27-186 (651)
63 1chu_A Protein (L-aspartate ox 99.1 7.8E-10 2.7E-14 120.2 15.1 39 39-78 4-42 (540)
64 2gv8_A Monooxygenase; FMO, FAD 99.1 4.2E-10 1.4E-14 119.7 12.6 68 152-239 112-179 (447)
65 4at0_A 3-ketosteroid-delta4-5a 99.1 2.8E-09 9.4E-14 115.3 18.3 38 41-78 39-76 (510)
66 2zxi_A TRNA uridine 5-carboxym 99.1 1E-09 3.4E-14 119.5 14.7 152 42-242 26-185 (637)
67 3cp8_A TRNA uridine 5-carboxym 99.1 1.2E-09 4E-14 119.3 15.2 151 41-240 19-177 (641)
68 1kf6_A Fumarate reductase flav 99.1 2E-09 6.9E-14 118.4 16.9 68 155-243 134-203 (602)
69 3ka7_A Oxidoreductase; structu 99.1 2E-09 6.8E-14 113.3 16.1 35 44-78 1-35 (425)
70 3gwf_A Cyclohexanone monooxyge 99.0 5.5E-10 1.9E-14 121.4 11.7 141 41-239 6-149 (540)
71 2gjc_A Thiazole biosynthetic e 99.0 2E-09 6.8E-14 108.4 14.6 144 42-244 64-246 (326)
72 1w4x_A Phenylacetone monooxyge 99.0 1.8E-09 6.1E-14 117.6 15.4 142 41-240 14-157 (542)
73 3itj_A Thioredoxin reductase 1 99.0 4.9E-10 1.7E-14 113.9 9.4 124 41-238 20-143 (338)
74 2vvm_A Monoamine oxidase N; FA 99.0 3.5E-08 1.2E-12 106.1 23.1 61 43-104 39-114 (495)
75 3axb_A Putative oxidoreductase 99.0 8.7E-10 3E-14 117.1 9.8 35 42-76 22-57 (448)
76 1pj5_A N,N-dimethylglycine oxi 99.0 3E-09 1E-13 121.8 14.5 70 151-246 147-217 (830)
77 1vdc_A NTR, NADPH dependent th 99.0 6.8E-10 2.3E-14 112.8 8.2 121 41-239 6-126 (333)
78 4ap3_A Steroid monooxygenase; 99.0 3E-09 1E-13 115.9 13.2 140 41-238 19-160 (549)
79 3lzw_A Ferredoxin--NADP reduct 99.0 2.9E-09 9.9E-14 107.8 12.0 118 43-239 7-125 (332)
80 3s5w_A L-ornithine 5-monooxyge 99.0 4.6E-09 1.6E-13 112.0 14.0 152 42-237 29-192 (463)
81 2xve_A Flavin-containing monoo 98.9 3.9E-09 1.4E-13 112.6 13.3 157 44-240 3-169 (464)
82 2bs2_A Quinol-fumarate reducta 98.9 2.1E-08 7.3E-13 111.1 19.1 38 41-78 3-40 (660)
83 1d4d_A Flavocytochrome C fumar 98.9 1.4E-08 4.6E-13 111.4 17.3 67 154-242 254-322 (572)
84 2rgh_A Alpha-glycerophosphate 98.9 7E-09 2.4E-13 113.5 14.1 73 152-245 185-259 (571)
85 2q0l_A TRXR, thioredoxin reduc 98.9 4.9E-09 1.7E-13 105.4 11.6 115 44-240 2-117 (311)
86 1c0p_A D-amino acid oxidase; a 98.9 2.8E-08 9.6E-13 102.3 17.6 37 41-77 4-40 (363)
87 2wdq_A Succinate dehydrogenase 98.9 1.7E-08 5.7E-13 110.9 16.5 39 40-78 4-42 (588)
88 2q7v_A Thioredoxin reductase; 98.9 7.4E-09 2.5E-13 104.8 12.6 116 41-238 6-124 (325)
89 3uox_A Otemo; baeyer-villiger 98.9 6.4E-09 2.2E-13 113.1 12.6 141 41-239 7-149 (545)
90 3f8d_A Thioredoxin reductase ( 98.9 6.2E-09 2.1E-13 104.8 11.6 112 42-237 14-125 (323)
91 3k7m_X 6-hydroxy-L-nicotine ox 98.9 1.8E-07 6.2E-12 98.5 22.8 35 44-78 2-36 (431)
92 3gyx_A Adenylylsulfate reducta 98.9 1.3E-08 4.4E-13 112.8 14.2 45 34-78 13-63 (662)
93 2h88_A Succinate dehydrogenase 98.9 4.2E-08 1.4E-12 108.0 18.0 64 155-239 155-219 (621)
94 3fbs_A Oxidoreductase; structu 98.9 1.5E-08 5E-13 100.8 13.0 112 44-239 3-114 (297)
95 3cty_A Thioredoxin reductase; 98.9 7.6E-09 2.6E-13 104.5 10.8 114 41-238 14-127 (319)
96 1s3e_A Amine oxidase [flavin-c 98.8 2.7E-07 9.3E-12 99.8 23.4 37 42-78 3-39 (520)
97 2e5v_A L-aspartate oxidase; ar 98.8 2.4E-08 8E-13 106.8 14.5 31 45-75 1-31 (472)
98 2a87_A TRXR, TR, thioredoxin r 98.8 2.8E-09 9.5E-14 108.6 6.4 115 41-238 12-127 (335)
99 1trb_A Thioredoxin reductase; 98.8 3.6E-09 1.2E-13 106.7 7.1 114 42-238 4-117 (320)
100 3lov_A Protoporphyrinogen oxid 98.8 5.1E-08 1.8E-12 104.2 16.4 62 43-105 4-82 (475)
101 3d1c_A Flavin-containing putat 98.8 2.1E-08 7E-13 103.3 12.0 140 43-238 4-144 (369)
102 4gut_A Lysine-specific histone 98.8 1.2E-08 4.1E-13 114.9 9.9 37 42-78 335-371 (776)
103 1fl2_A Alkyl hydroperoxide red 98.8 1.9E-08 6.5E-13 101.0 10.0 112 44-238 2-116 (310)
104 3o0h_A Glutathione reductase; 98.7 5.6E-08 1.9E-12 104.3 13.7 46 30-75 13-58 (484)
105 1jnr_A Adenylylsulfate reducta 98.7 2E-07 7E-12 103.3 18.2 38 41-78 20-61 (643)
106 1ojt_A Surface protein; redox- 98.7 2.9E-08 9.9E-13 106.5 10.4 38 41-78 4-41 (482)
107 4fk1_A Putative thioredoxin re 98.7 7.6E-08 2.6E-12 96.5 12.9 36 41-76 4-39 (304)
108 2a8x_A Dihydrolipoyl dehydroge 98.7 3.7E-08 1.3E-12 105.0 10.8 33 43-75 3-35 (464)
109 1v59_A Dihydrolipoamide dehydr 98.6 4.5E-08 1.5E-12 104.8 9.0 37 42-78 4-40 (478)
110 1hyu_A AHPF, alkyl hydroperoxi 98.6 8E-08 2.7E-12 104.0 10.9 115 41-238 210-327 (521)
111 4dgk_A Phytoene dehydrogenase; 98.6 5.5E-08 1.9E-12 104.7 8.6 34 45-78 3-36 (501)
112 2ivd_A PPO, PPOX, protoporphyr 98.6 1.1E-07 3.8E-12 101.6 10.0 63 42-105 15-92 (478)
113 3urh_A Dihydrolipoyl dehydroge 98.6 5.2E-07 1.8E-11 96.9 14.9 38 41-78 23-60 (491)
114 4b63_A L-ornithine N5 monooxyg 98.6 4.2E-07 1.4E-11 97.8 14.2 64 151-235 141-212 (501)
115 3nks_A Protoporphyrinogen oxid 98.5 1.4E-07 4.6E-12 100.9 9.2 35 44-78 3-39 (477)
116 1dxl_A Dihydrolipoamide dehydr 98.5 1.1E-07 3.7E-12 101.6 8.2 38 41-78 4-41 (470)
117 4a5l_A Thioredoxin reductase; 98.5 8.4E-08 2.9E-12 96.3 6.0 34 43-76 4-37 (314)
118 3r9u_A Thioredoxin reductase; 98.5 7.1E-07 2.4E-11 89.3 11.8 111 43-236 4-117 (315)
119 3g3e_A D-amino-acid oxidase; F 98.4 2.1E-08 7.2E-13 102.7 -0.8 33 44-76 1-39 (351)
120 3dk9_A Grase, GR, glutathione 98.4 5E-06 1.7E-10 88.9 16.5 36 41-76 18-53 (478)
121 1q1r_A Putidaredoxin reductase 98.4 6.5E-07 2.2E-11 94.5 8.8 35 43-77 4-40 (431)
122 4gcm_A TRXR, thioredoxin reduc 98.3 2.4E-07 8.4E-12 93.0 4.8 37 39-75 2-38 (312)
123 3h8l_A NADH oxidase; membrane 98.3 8.2E-07 2.8E-11 92.9 8.7 33 45-77 3-38 (409)
124 3fpz_A Thiazole biosynthetic e 98.3 4.8E-07 1.7E-11 91.7 6.4 37 42-78 64-102 (326)
125 3ics_A Coenzyme A-disulfide re 98.3 1.9E-06 6.4E-11 94.7 11.2 36 43-78 36-73 (588)
126 2bc0_A NADH oxidase; flavoprot 98.3 2.9E-06 1E-10 91.0 11.9 36 43-78 35-73 (490)
127 1ebd_A E3BD, dihydrolipoamide 98.3 2.5E-06 8.4E-11 90.6 10.9 33 43-75 3-35 (455)
128 3l8k_A Dihydrolipoyl dehydroge 98.3 2.5E-06 8.4E-11 90.9 10.9 37 42-78 3-39 (466)
129 2cdu_A NADPH oxidase; flavoenz 98.3 1.8E-06 6.3E-11 91.5 9.6 35 44-78 1-37 (452)
130 3oc4_A Oxidoreductase, pyridin 98.3 5.1E-06 1.7E-10 88.1 13.0 36 44-79 3-40 (452)
131 4gde_A UDP-galactopyranose mut 98.3 4.2E-07 1.4E-11 97.9 4.5 39 40-78 7-46 (513)
132 1zmd_A Dihydrolipoyl dehydroge 98.2 4.2E-06 1.4E-10 89.3 11.9 37 42-78 5-41 (474)
133 3klj_A NAD(FAD)-dependent dehy 98.2 3.4E-06 1.2E-10 87.5 10.5 37 42-78 8-44 (385)
134 3iwa_A FAD-dependent pyridine 98.2 2.9E-06 9.9E-11 90.5 9.9 35 44-78 4-40 (472)
135 3dgh_A TRXR-1, thioredoxin red 98.2 1.5E-05 5.3E-10 85.2 15.4 35 41-75 7-41 (483)
136 3cgb_A Pyridine nucleotide-dis 98.2 2.4E-06 8.2E-11 91.4 8.9 35 44-78 37-73 (480)
137 3lxd_A FAD-dependent pyridine 98.2 4E-06 1.4E-10 87.9 10.3 37 42-78 8-46 (415)
138 2yqu_A 2-oxoglutarate dehydrog 98.2 7.1E-06 2.4E-10 87.0 12.3 100 43-239 167-266 (455)
139 2v3a_A Rubredoxin reductase; a 98.2 6.9E-06 2.4E-10 85.1 11.8 101 43-239 145-245 (384)
140 1nhp_A NADH peroxidase; oxidor 98.2 5.8E-06 2E-10 87.5 11.0 34 45-78 2-37 (447)
141 2qae_A Lipoamide, dihydrolipoy 98.2 5.2E-06 1.8E-10 88.4 10.5 36 43-78 2-37 (468)
142 2eq6_A Pyruvate dehydrogenase 98.2 1.2E-05 4.2E-10 85.5 13.3 102 44-239 170-273 (464)
143 3qfa_A Thioredoxin reductase 1 98.2 9.8E-06 3.4E-10 87.5 12.4 36 41-76 30-65 (519)
144 2yg5_A Putrescine oxidase; oxi 98.1 2.7E-06 9.3E-11 90.1 7.4 38 41-78 3-40 (453)
145 3sx6_A Sulfide-quinone reducta 98.1 4.4E-06 1.5E-10 88.2 9.0 34 44-77 5-41 (437)
146 2bcg_G Secretory pathway GDP d 98.1 1.9E-06 6.7E-11 91.4 6.2 38 41-78 9-46 (453)
147 2gqw_A Ferredoxin reductase; f 98.1 1.9E-06 6.5E-11 90.2 6.0 37 42-78 6-44 (408)
148 3kd9_A Coenzyme A disulfide re 98.1 7E-06 2.4E-10 86.9 9.6 35 44-78 4-40 (449)
149 3ntd_A FAD-dependent pyridine 98.1 7.1E-06 2.4E-10 89.5 9.7 35 44-78 2-38 (565)
150 2yqu_A 2-oxoglutarate dehydrog 98.1 4.3E-06 1.5E-10 88.8 7.7 35 44-78 2-36 (455)
151 2e1m_A L-glutamate oxidase; L- 98.1 3.5E-06 1.2E-10 86.7 6.7 35 41-75 42-76 (376)
152 1xhc_A NADH oxidase /nitrite r 98.1 6.7E-06 2.3E-10 84.7 8.3 34 44-78 9-42 (367)
153 3dgz_A Thioredoxin reductase 2 98.0 2.4E-05 8.1E-10 83.8 12.7 36 41-76 4-39 (488)
154 3h28_A Sulfide-quinone reducta 98.0 3.8E-06 1.3E-10 88.5 6.4 35 44-78 3-39 (430)
155 1sez_A Protoporphyrinogen oxid 98.0 7.4E-06 2.5E-10 88.0 7.6 62 42-104 12-88 (504)
156 1xdi_A RV3303C-LPDA; reductase 98.0 1.2E-05 4.2E-10 86.3 9.1 34 43-76 2-38 (499)
157 1rsg_A FMS1 protein; FAD bindi 98.0 3.3E-06 1.1E-10 91.1 4.7 38 41-78 6-44 (516)
158 3fg2_P Putative rubredoxin red 98.0 1.6E-05 5.4E-10 83.0 9.5 35 44-78 2-38 (404)
159 3ef6_A Toluene 1,2-dioxygenase 98.0 1.9E-05 6.5E-10 82.5 9.9 35 44-78 3-39 (410)
160 1y56_A Hypothetical protein PH 98.0 9.9E-06 3.4E-10 86.9 7.9 37 41-78 106-142 (493)
161 1v0j_A UDP-galactopyranose mut 98.0 5.3E-06 1.8E-10 86.5 5.6 37 42-78 6-43 (399)
162 4eqs_A Coenzyme A disulfide re 98.0 2.4E-05 8.1E-10 82.6 10.5 34 45-78 2-37 (437)
163 2jae_A L-amino acid oxidase; o 98.0 6.2E-06 2.1E-10 88.3 5.9 38 41-78 9-46 (489)
164 1ges_A Glutathione reductase; 97.9 3.4E-05 1.2E-09 81.7 11.2 99 43-238 167-266 (450)
165 1v59_A Dihydrolipoamide dehydr 97.9 9.8E-05 3.4E-09 78.7 14.9 104 43-238 183-288 (478)
166 1ebd_A E3BD, dihydrolipoamide 97.9 5.1E-05 1.8E-09 80.4 12.5 101 43-237 170-270 (455)
167 2b9w_A Putative aminooxidase; 97.9 7.9E-06 2.7E-10 85.7 6.0 37 42-78 5-42 (424)
168 3hdq_A UDP-galactopyranose mut 97.9 7.3E-06 2.5E-10 85.0 5.5 38 41-78 27-64 (397)
169 3s5w_A L-ornithine 5-monooxyge 97.9 0.00017 5.9E-09 76.4 15.6 141 43-236 227-376 (463)
170 3hyw_A Sulfide-quinone reducta 97.9 1.3E-05 4.4E-10 84.5 6.7 33 45-77 4-38 (430)
171 4dna_A Probable glutathione re 97.9 6.7E-06 2.3E-10 87.5 4.5 34 41-74 3-36 (463)
172 3ic9_A Dihydrolipoamide dehydr 97.8 7.4E-06 2.5E-10 87.8 3.8 36 41-76 6-41 (492)
173 4b1b_A TRXR, thioredoxin reduc 97.8 7.5E-05 2.6E-09 80.7 11.6 35 43-77 42-76 (542)
174 2r9z_A Glutathione amide reduc 97.8 9E-05 3.1E-09 78.7 12.0 99 44-238 167-265 (463)
175 2iid_A L-amino-acid oxidase; f 97.8 2.4E-05 8.2E-10 83.9 7.6 38 41-78 31-68 (498)
176 3lad_A Dihydrolipoamide dehydr 97.8 1.2E-05 3.9E-10 85.9 4.9 37 42-78 2-38 (476)
177 1nhp_A NADH peroxidase; oxidor 97.8 9.5E-05 3.2E-09 78.1 11.6 99 42-238 148-247 (447)
178 1dxl_A Dihydrolipoamide dehydr 97.8 0.00012 4.1E-09 77.8 12.0 103 43-237 177-279 (470)
179 2qae_A Lipoamide, dihydrolipoy 97.8 0.00018 6E-09 76.5 13.3 103 43-238 174-277 (468)
180 1zmd_A Dihydrolipoyl dehydroge 97.8 0.00023 7.9E-09 75.7 14.1 104 43-237 178-282 (474)
181 1ojt_A Surface protein; redox- 97.7 0.00011 3.9E-09 78.3 11.1 102 43-238 185-287 (482)
182 1i8t_A UDP-galactopyranose mut 97.7 1.9E-05 6.3E-10 81.4 4.7 35 44-78 2-36 (367)
183 2gag_A Heterotetrameric sarcos 97.7 0.00014 4.9E-09 84.2 12.6 37 42-78 127-163 (965)
184 4dsg_A UDP-galactopyranose mut 97.7 2.4E-05 8.1E-10 83.7 5.6 38 41-78 7-45 (484)
185 2hqm_A GR, grase, glutathione 97.7 2E-05 6.7E-10 84.3 4.6 35 42-76 10-44 (479)
186 2bi7_A UDP-galactopyranose mut 97.7 2.2E-05 7.7E-10 81.3 4.8 36 43-78 3-38 (384)
187 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00027 9.2E-09 75.0 13.2 101 43-237 171-271 (464)
188 3vrd_B FCCB subunit, flavocyto 97.7 0.00014 4.6E-09 75.6 10.6 33 45-77 4-38 (401)
189 1mo9_A ORF3; nucleotide bindin 97.7 3.3E-05 1.1E-09 83.5 6.0 37 41-77 41-77 (523)
190 3g5s_A Methylenetetrahydrofola 97.7 3.9E-05 1.3E-09 78.3 6.0 35 44-78 2-36 (443)
191 3pl8_A Pyranose 2-oxidase; sub 97.7 2.4E-05 8.2E-10 86.2 4.8 39 41-79 44-82 (623)
192 1d5t_A Guanine nucleotide diss 97.7 3.6E-05 1.2E-09 81.0 6.1 37 42-78 5-41 (433)
193 1trb_A Thioredoxin reductase; 97.7 0.00036 1.2E-08 69.7 13.1 100 44-237 146-247 (320)
194 2vdc_G Glutamate synthase [NAD 97.7 3.5E-05 1.2E-09 81.7 5.8 37 42-78 121-157 (456)
195 2r9z_A Glutathione amide reduc 97.7 2.7E-05 9.2E-10 82.8 4.8 34 42-75 3-36 (463)
196 3ic9_A Dihydrolipoamide dehydr 97.7 0.00037 1.3E-08 74.5 13.7 101 43-237 174-274 (492)
197 3lad_A Dihydrolipoamide dehydr 97.7 0.00042 1.4E-08 73.7 14.1 100 43-236 180-279 (476)
198 2hqm_A GR, grase, glutathione 97.6 0.00023 8E-09 75.8 11.8 101 43-239 185-287 (479)
199 1ges_A Glutathione reductase; 97.6 2.8E-05 9.6E-10 82.3 4.5 34 42-75 3-36 (450)
200 1zk7_A HGII, reductase, mercur 97.6 3.1E-05 1E-09 82.4 4.8 34 42-75 3-36 (467)
201 1onf_A GR, grase, glutathione 97.6 0.00021 7.1E-09 76.7 11.3 101 43-239 176-277 (500)
202 3p1w_A Rabgdi protein; GDI RAB 97.6 3.7E-05 1.3E-09 81.4 5.2 38 41-78 18-55 (475)
203 2eq6_A Pyruvate dehydrogenase 97.6 2.8E-05 9.6E-10 82.7 4.3 34 43-76 6-39 (464)
204 1onf_A GR, grase, glutathione 97.6 3.8E-05 1.3E-09 82.5 5.2 34 43-76 2-35 (500)
205 3lxd_A FAD-dependent pyridine 97.6 0.00031 1.1E-08 73.3 12.0 100 43-238 152-252 (415)
206 1xdi_A RV3303C-LPDA; reductase 97.6 0.00031 1E-08 75.3 12.0 99 43-238 182-280 (499)
207 3fg2_P Putative rubredoxin red 97.6 0.00041 1.4E-08 72.1 12.4 108 44-247 143-253 (404)
208 3iwa_A FAD-dependent pyridine 97.6 0.00041 1.4E-08 73.7 12.7 98 44-237 160-258 (472)
209 1q1r_A Putidaredoxin reductase 97.6 0.00034 1.2E-08 73.4 11.8 108 44-247 150-262 (431)
210 3ef6_A Toluene 1,2-dioxygenase 97.6 0.0002 6.8E-09 74.8 9.6 109 43-247 143-253 (410)
211 3k30_A Histamine dehydrogenase 97.5 5.4E-05 1.8E-09 84.6 5.3 38 41-78 389-426 (690)
212 1lvl_A Dihydrolipoamide dehydr 97.5 0.00022 7.4E-09 75.6 9.4 36 43-78 171-206 (458)
213 1lvl_A Dihydrolipoamide dehydr 97.5 6.1E-05 2.1E-09 79.9 5.1 33 42-74 4-36 (458)
214 1zk7_A HGII, reductase, mercur 97.5 0.00037 1.2E-08 74.0 11.1 97 43-238 176-272 (467)
215 2v3a_A Rubredoxin reductase; a 97.5 7.4E-05 2.5E-09 77.2 5.4 34 43-76 4-39 (384)
216 1mo9_A ORF3; nucleotide bindin 97.5 0.00043 1.5E-08 74.7 11.6 100 44-239 215-318 (523)
217 2wpf_A Trypanothione reductase 97.5 4.9E-05 1.7E-09 81.5 4.1 34 41-74 5-39 (495)
218 2wpf_A Trypanothione reductase 97.5 0.00038 1.3E-08 74.5 10.9 98 43-237 191-292 (495)
219 1fec_A Trypanothione reductase 97.5 0.00036 1.2E-08 74.6 10.7 98 43-237 187-288 (490)
220 1kdg_A CDH, cellobiose dehydro 97.5 7.4E-05 2.5E-09 81.1 5.2 37 42-78 6-42 (546)
221 2cdu_A NADPH oxidase; flavoenz 97.5 0.00072 2.5E-08 71.4 12.4 98 44-237 150-247 (452)
222 3itj_A Thioredoxin reductase 1 97.5 0.00087 3E-08 67.2 12.5 35 44-78 174-208 (338)
223 3ntd_A FAD-dependent pyridine 97.5 0.00062 2.1E-08 74.1 12.2 35 44-78 152-186 (565)
224 3dgz_A Thioredoxin reductase 2 97.4 0.0013 4.4E-08 70.2 14.3 101 43-236 185-286 (488)
225 1b37_A Protein (polyamine oxid 97.4 9.5E-05 3.2E-09 78.7 5.3 37 42-78 3-40 (472)
226 2gqw_A Ferredoxin reductase; f 97.4 0.00063 2.2E-08 70.8 11.6 36 43-78 145-180 (408)
227 3oc4_A Oxidoreductase, pyridin 97.4 0.00081 2.8E-08 71.0 12.4 97 44-237 148-244 (452)
228 3cgb_A Pyridine nucleotide-dis 97.4 0.0005 1.7E-08 73.2 10.4 35 43-77 186-220 (480)
229 1fec_A Trypanothione reductase 97.4 8.1E-05 2.8E-09 79.7 4.2 32 43-74 3-35 (490)
230 1o94_A Tmadh, trimethylamine d 97.4 0.00012 4.1E-09 82.2 5.7 38 41-78 387-424 (729)
231 2x8g_A Thioredoxin glutathione 97.4 9.8E-05 3.3E-09 81.1 4.9 35 41-75 105-139 (598)
232 2zbw_A Thioredoxin reductase; 97.4 0.0013 4.6E-08 66.0 13.0 35 44-78 153-187 (335)
233 4b1b_A TRXR, thioredoxin reduc 97.4 0.00085 2.9E-08 72.4 12.1 100 41-238 221-320 (542)
234 2q0l_A TRXR, thioredoxin reduc 97.4 0.0019 6.4E-08 64.1 13.7 34 44-77 144-177 (311)
235 3qfa_A Thioredoxin reductase 1 97.4 0.00089 3E-08 72.1 12.1 33 43-75 210-242 (519)
236 3ab1_A Ferredoxin--NADP reduct 97.4 0.00078 2.7E-08 68.6 10.9 35 44-78 164-198 (360)
237 1m6i_A Programmed cell death p 97.3 0.0011 3.8E-08 70.8 12.2 108 44-247 181-294 (493)
238 1fl2_A Alkyl hydroperoxide red 97.3 0.0015 5.2E-08 64.8 12.4 35 44-78 145-179 (310)
239 2z3y_A Lysine-specific histone 97.3 0.00016 5.6E-09 80.3 5.5 38 41-78 105-142 (662)
240 1lqt_A FPRA; NADP+ derivative, 97.3 0.0001 3.6E-09 78.0 3.7 36 43-78 3-45 (456)
241 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00016 5.6E-09 80.4 5.3 38 41-78 371-408 (671)
242 2bc0_A NADH oxidase; flavoprot 97.3 0.0011 3.8E-08 70.7 11.6 36 43-78 194-229 (490)
243 2xag_A Lysine-specific histone 97.3 0.0002 6.8E-09 81.3 5.7 37 42-78 277-313 (852)
244 3t37_A Probable dehydrogenase; 97.3 0.00016 5.5E-09 77.9 4.7 38 41-78 15-53 (526)
245 1gpe_A Protein (glucose oxidas 97.2 0.00032 1.1E-08 76.7 6.8 40 39-78 20-60 (587)
246 1ju2_A HydroxynitrIle lyase; f 97.2 0.00014 4.8E-09 78.7 3.4 37 41-78 24-60 (536)
247 1m6i_A Programmed cell death p 97.2 0.00019 6.5E-09 76.8 4.3 37 42-78 10-48 (493)
248 1cjc_A Protein (adrenodoxin re 97.2 0.00023 7.7E-09 75.5 4.5 36 43-78 6-43 (460)
249 3cty_A Thioredoxin reductase; 97.2 0.003 1E-07 62.9 12.6 34 44-77 156-189 (319)
250 1gte_A Dihydropyrimidine dehyd 97.1 0.00029 1E-08 82.1 5.5 37 42-78 186-223 (1025)
251 4g6h_A Rotenone-insensitive NA 97.1 0.0011 3.9E-08 70.9 9.4 58 156-235 273-330 (502)
252 3q9t_A Choline dehydrogenase a 97.1 0.00028 9.5E-09 76.8 4.7 37 41-77 4-41 (577)
253 1xhc_A NADH oxidase /nitrite r 97.1 0.0013 4.6E-08 67.3 9.5 35 44-78 144-178 (367)
254 4dna_A Probable glutathione re 97.1 0.0023 7.7E-08 67.8 11.6 97 43-237 170-268 (463)
255 2q7v_A Thioredoxin reductase; 97.0 0.0058 2E-07 61.0 13.4 35 44-78 153-187 (325)
256 1vdc_A NTR, NADPH dependent th 97.0 0.0034 1.2E-07 62.9 11.6 35 44-78 160-194 (333)
257 1n4w_A CHOD, cholesterol oxida 97.0 0.00041 1.4E-08 74.5 4.9 37 42-78 4-40 (504)
258 3d1c_A Flavin-containing putat 97.0 0.0029 1E-07 64.3 11.2 35 44-78 167-201 (369)
259 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00032 1.1E-08 77.6 3.5 36 43-78 56-100 (721)
260 3qvp_A Glucose oxidase; oxidor 96.9 0.0005 1.7E-08 74.9 4.7 36 41-76 17-53 (583)
261 2jbv_A Choline oxidase; alcoho 96.9 0.00062 2.1E-08 73.8 5.4 38 41-78 11-49 (546)
262 1coy_A Cholesterol oxidase; ox 96.9 0.00063 2.2E-08 73.0 5.4 38 41-78 9-46 (507)
263 3ics_A Coenzyme A-disulfide re 96.9 0.0033 1.1E-07 68.6 11.1 105 44-247 188-294 (588)
264 3r9u_A Thioredoxin reductase; 96.9 0.0067 2.3E-07 59.9 12.2 35 44-78 148-182 (315)
265 3l8k_A Dihydrolipoyl dehydroge 96.9 0.0042 1.4E-07 65.7 11.2 36 43-78 172-207 (466)
266 3f8d_A Thioredoxin reductase ( 96.9 0.0079 2.7E-07 59.6 12.6 35 44-78 155-189 (323)
267 4g6h_A Rotenone-insensitive NA 96.9 0.00048 1.6E-08 73.8 3.7 37 41-77 40-76 (502)
268 4eqs_A Coenzyme A disulfide re 96.9 0.0027 9.2E-08 66.7 9.3 35 44-78 148-182 (437)
269 2x8g_A Thioredoxin glutathione 96.8 0.0094 3.2E-07 65.2 13.8 32 44-75 287-318 (598)
270 3lzw_A Ferredoxin--NADP reduct 96.8 0.0072 2.5E-07 60.2 12.0 34 44-77 155-188 (332)
271 3kd9_A Coenzyme A disulfide re 96.8 0.0049 1.7E-07 64.9 11.0 35 44-78 149-183 (449)
272 1vg0_A RAB proteins geranylger 96.8 0.0012 4.1E-08 72.2 6.3 39 41-79 6-44 (650)
273 3fim_B ARYL-alcohol oxidase; A 96.8 0.00051 1.7E-08 74.6 3.1 36 43-78 2-38 (566)
274 2a87_A TRXR, TR, thioredoxin r 96.8 0.0056 1.9E-07 61.5 10.6 34 44-77 156-189 (335)
275 1hyu_A AHPF, alkyl hydroperoxi 96.7 0.0072 2.5E-07 65.0 11.2 35 44-78 356-390 (521)
276 3gwf_A Cyclohexanone monooxyge 96.5 0.0017 5.7E-08 70.2 5.1 54 43-96 178-231 (540)
277 3uox_A Otemo; baeyer-villiger 96.5 0.0037 1.3E-07 67.6 7.4 54 43-96 185-238 (545)
278 3k30_A Histamine dehydrogenase 96.1 0.019 6.5E-07 63.9 10.6 35 44-78 524-560 (690)
279 1lqt_A FPRA; NADP+ derivative, 96.1 0.028 9.6E-07 59.2 11.3 35 44-78 148-203 (456)
280 1cjc_A Protein (adrenodoxin re 96.1 0.042 1.4E-06 57.9 12.7 35 44-78 146-201 (460)
281 2g1u_A Hypothetical protein TM 96.0 0.0049 1.7E-07 54.6 4.3 35 44-78 20-54 (155)
282 3fwz_A Inner membrane protein 95.9 0.008 2.7E-07 52.2 5.3 35 43-77 7-41 (140)
283 3klj_A NAD(FAD)-dependent dehy 95.9 0.0066 2.3E-07 62.5 5.3 36 44-79 147-182 (385)
284 3fbs_A Oxidoreductase; structu 95.7 0.021 7.1E-07 55.7 7.6 33 43-76 141-173 (297)
285 1id1_A Putative potassium chan 95.6 0.014 4.9E-07 51.4 5.6 33 44-76 4-36 (153)
286 1lss_A TRK system potassium up 95.6 0.008 2.7E-07 51.7 3.8 33 44-76 5-37 (140)
287 4ap3_A Steroid monooxygenase; 95.5 0.0083 2.9E-07 64.9 4.5 54 43-96 191-244 (549)
288 3llv_A Exopolyphosphatase-rela 95.4 0.012 4.1E-07 50.9 4.4 33 44-76 7-39 (141)
289 3ic5_A Putative saccharopine d 95.1 0.016 5.6E-07 48.0 4.0 33 44-76 6-39 (118)
290 4gcm_A TRXR, thioredoxin reduc 95.1 0.017 5.9E-07 57.2 4.8 35 44-78 146-180 (312)
291 3sx6_A Sulfide-quinone reducta 95.0 0.2 6.7E-06 52.2 13.0 55 159-235 212-267 (437)
292 2gag_A Heterotetrameric sarcos 95.0 0.058 2E-06 62.3 9.5 35 44-78 285-319 (965)
293 1ps9_A 2,4-dienoyl-COA reducta 94.9 0.12 4.2E-06 57.1 11.7 27 44-70 495-521 (671)
294 2hmt_A YUAA protein; RCK, KTN, 94.9 0.022 7.6E-07 49.0 4.5 32 45-76 8-39 (144)
295 1o94_A Tmadh, trimethylamine d 94.9 0.1 3.5E-06 58.3 11.0 33 44-76 529-563 (729)
296 2vdc_G Glutamate synthase [NAD 94.9 0.069 2.4E-06 56.2 9.0 35 44-78 265-300 (456)
297 3c85_A Putative glutathione-re 94.7 0.025 8.4E-07 51.4 4.5 35 43-77 39-74 (183)
298 1gte_A Dihydropyrimidine dehyd 94.7 0.23 7.8E-06 57.8 13.5 32 45-76 334-366 (1025)
299 1pzg_A LDH, lactate dehydrogen 94.6 0.03 1E-06 56.3 5.2 37 41-77 7-44 (331)
300 1f0y_A HCDH, L-3-hydroxyacyl-C 94.5 0.032 1.1E-06 55.2 5.1 33 45-77 17-49 (302)
301 3l4b_C TRKA K+ channel protien 94.3 0.028 9.6E-07 52.7 3.8 33 45-77 2-34 (218)
302 4a5l_A Thioredoxin reductase; 94.2 0.034 1.2E-06 54.8 4.6 35 44-78 153-187 (314)
303 3k96_A Glycerol-3-phosphate de 93.3 0.07 2.4E-06 54.2 5.0 35 43-77 29-63 (356)
304 3dfz_A SIRC, precorrin-2 dehyd 93.2 0.11 3.7E-06 48.9 5.8 33 43-75 31-63 (223)
305 3i83_A 2-dehydropantoate 2-red 93.2 0.071 2.4E-06 53.2 4.7 32 44-75 3-34 (320)
306 1y6j_A L-lactate dehydrogenase 93.1 0.083 2.8E-06 52.7 5.1 36 42-77 6-43 (318)
307 3tl2_A Malate dehydrogenase; c 93.0 0.083 2.8E-06 52.6 4.9 35 42-76 7-42 (315)
308 3h28_A Sulfide-quinone reducta 93.0 0.35 1.2E-05 50.1 10.0 43 359-401 287-336 (430)
309 4e12_A Diketoreductase; oxidor 92.9 0.077 2.6E-06 51.9 4.5 34 44-77 5-38 (283)
310 3ghy_A Ketopantoate reductase 92.8 0.1 3.5E-06 52.4 5.4 32 44-75 4-35 (335)
311 4dio_A NAD(P) transhydrogenase 92.7 0.088 3E-06 54.0 4.7 35 43-77 190-224 (405)
312 3hn2_A 2-dehydropantoate 2-red 92.6 0.093 3.2E-06 52.1 4.7 32 44-75 3-34 (312)
313 2ewd_A Lactate dehydrogenase,; 92.6 0.095 3.3E-06 52.2 4.8 34 44-77 5-39 (317)
314 3ado_A Lambda-crystallin; L-gu 92.5 0.086 2.9E-06 52.5 4.2 34 44-77 7-40 (319)
315 3lk7_A UDP-N-acetylmuramoylala 92.5 0.089 3E-06 55.2 4.6 33 44-76 10-42 (451)
316 2x5o_A UDP-N-acetylmuramoylala 92.5 0.074 2.5E-06 55.6 3.9 35 44-78 6-40 (439)
317 3dk9_A Grase, GR, glutathione 92.5 0.1 3.5E-06 55.2 5.0 37 43-79 187-223 (478)
318 4g65_A TRK system potassium up 92.5 0.042 1.4E-06 57.9 2.0 34 44-77 4-37 (461)
319 3g0o_A 3-hydroxyisobutyrate de 92.4 0.085 2.9E-06 52.2 4.1 34 43-76 7-40 (303)
320 1ks9_A KPA reductase;, 2-dehyd 92.4 0.11 3.7E-06 50.6 4.9 33 45-77 2-34 (291)
321 3l9w_A Glutathione-regulated p 92.3 0.1 3.4E-06 54.1 4.6 34 44-77 5-38 (413)
322 3doj_A AT3G25530, dehydrogenas 92.3 0.1 3.6E-06 51.7 4.6 34 44-77 22-55 (310)
323 1jw9_B Molybdopterin biosynthe 92.3 0.095 3.2E-06 50.3 4.1 34 43-76 31-65 (249)
324 2raf_A Putative dinucleotide-b 92.3 0.13 4.4E-06 47.8 5.0 34 44-77 20-53 (209)
325 3qha_A Putative oxidoreductase 92.2 0.11 3.9E-06 51.1 4.7 36 43-78 15-50 (296)
326 3pqe_A L-LDH, L-lactate dehydr 92.2 0.11 3.9E-06 51.8 4.6 35 41-75 3-39 (326)
327 4dll_A 2-hydroxy-3-oxopropiona 92.1 0.09 3.1E-06 52.5 3.9 35 43-77 31-65 (320)
328 1t2d_A LDH-P, L-lactate dehydr 91.9 0.14 5E-06 51.0 5.1 34 44-77 5-39 (322)
329 1bg6_A N-(1-D-carboxylethyl)-L 91.9 0.13 4.3E-06 52.0 4.7 33 44-76 5-37 (359)
330 1lld_A L-lactate dehydrogenase 91.8 0.13 4.5E-06 51.1 4.7 33 44-76 8-42 (319)
331 2hjr_A Malate dehydrogenase; m 91.8 0.15 5.1E-06 51.1 5.0 34 44-77 15-49 (328)
332 3g17_A Similar to 2-dehydropan 91.7 0.12 4E-06 50.9 4.1 33 44-76 3-35 (294)
333 3p2y_A Alanine dehydrogenase/p 91.7 0.11 3.6E-06 53.0 3.8 35 43-77 184-218 (381)
334 2xve_A Flavin-containing monoo 91.7 0.12 4.2E-06 54.4 4.5 35 44-78 198-232 (464)
335 2dpo_A L-gulonate 3-dehydrogen 91.6 0.13 4.4E-06 51.3 4.4 34 44-77 7-40 (319)
336 3urh_A Dihydrolipoyl dehydroge 91.6 0.12 4.1E-06 54.8 4.3 103 43-237 198-300 (491)
337 2gv8_A Monooxygenase; FMO, FAD 91.5 0.16 5.4E-06 53.1 5.2 35 44-78 213-248 (447)
338 2ew2_A 2-dehydropantoate 2-red 91.5 0.15 5E-06 50.3 4.6 32 45-76 5-36 (316)
339 2y0c_A BCEC, UDP-glucose dehyd 91.5 0.14 4.9E-06 54.1 4.7 35 43-77 8-42 (478)
340 2uyy_A N-PAC protein; long-cha 91.5 0.2 6.8E-06 49.7 5.6 34 44-77 31-64 (316)
341 3gg2_A Sugar dehydrogenase, UD 91.5 0.12 4.2E-06 54.1 4.1 34 44-77 3-36 (450)
342 3oj0_A Glutr, glutamyl-tRNA re 91.4 0.065 2.2E-06 46.5 1.7 34 44-77 22-55 (144)
343 1l7d_A Nicotinamide nucleotide 91.4 0.16 5.3E-06 52.2 4.8 35 43-77 172-206 (384)
344 1kyq_A Met8P, siroheme biosynt 91.3 0.1 3.5E-06 50.7 3.1 34 43-76 13-46 (274)
345 2vns_A Metalloreductase steap3 91.3 0.2 6.8E-06 46.7 5.0 33 44-76 29-61 (215)
346 4a7p_A UDP-glucose dehydrogena 91.2 0.17 5.8E-06 52.9 4.9 36 43-78 8-43 (446)
347 2qyt_A 2-dehydropantoate 2-red 91.2 0.11 3.8E-06 51.4 3.4 31 44-74 9-45 (317)
348 2jae_A L-amino acid oxidase; o 91.1 2.6 9E-05 44.1 14.3 44 189-236 252-295 (489)
349 3gvi_A Malate dehydrogenase; N 91.0 0.2 6.8E-06 50.0 5.0 34 44-77 8-42 (324)
350 1x13_A NAD(P) transhydrogenase 91.0 0.17 5.8E-06 52.2 4.6 34 44-77 173-206 (401)
351 1pjc_A Protein (L-alanine dehy 90.8 0.17 5.7E-06 51.5 4.3 33 44-76 168-200 (361)
352 2v6b_A L-LDH, L-lactate dehydr 90.8 0.19 6.5E-06 49.7 4.6 32 45-76 2-35 (304)
353 3g79_A NDP-N-acetyl-D-galactos 90.6 0.2 6.8E-06 52.8 4.8 34 44-77 19-54 (478)
354 3d1l_A Putative NADP oxidoredu 90.4 0.25 8.7E-06 47.5 5.0 33 44-76 11-44 (266)
355 3dfu_A Uncharacterized protein 90.4 0.077 2.6E-06 50.2 1.2 32 43-74 6-37 (232)
356 3p7m_A Malate dehydrogenase; p 90.3 0.26 8.7E-06 49.1 5.1 34 44-77 6-40 (321)
357 3l6d_A Putative oxidoreductase 90.3 0.29 1E-05 48.3 5.5 35 43-77 9-43 (306)
358 3ktd_A Prephenate dehydrogenas 90.2 0.26 8.9E-06 49.5 5.0 33 44-76 9-41 (341)
359 1guz_A Malate dehydrogenase; o 90.1 0.25 8.4E-06 49.0 4.8 33 45-77 2-36 (310)
360 4huj_A Uncharacterized protein 90.0 0.16 5.6E-06 47.5 3.2 34 44-77 24-58 (220)
361 3ego_A Probable 2-dehydropanto 89.9 0.25 8.5E-06 48.9 4.6 32 44-76 3-34 (307)
362 3mog_A Probable 3-hydroxybutyr 89.9 0.31 1E-05 51.5 5.5 34 44-77 6-39 (483)
363 1ur5_A Malate dehydrogenase; o 89.9 0.28 9.4E-06 48.6 4.9 33 44-76 3-36 (309)
364 3hwr_A 2-dehydropantoate 2-red 89.9 0.21 7.1E-06 49.7 4.0 32 44-76 20-51 (318)
365 1mv8_A GMD, GDP-mannose 6-dehy 89.8 0.17 6E-06 52.7 3.5 33 45-77 2-34 (436)
366 2aef_A Calcium-gated potassium 89.8 0.12 4.2E-06 48.7 2.1 34 43-77 9-42 (234)
367 3qsg_A NAD-binding phosphogluc 89.7 0.31 1E-05 48.4 5.0 33 44-76 25-58 (312)
368 4e21_A 6-phosphogluconate dehy 89.7 0.23 7.8E-06 50.4 4.1 36 42-77 21-56 (358)
369 3eag_A UDP-N-acetylmuramate:L- 89.7 0.24 8.3E-06 49.4 4.3 34 44-77 5-39 (326)
370 1vpd_A Tartronate semialdehyde 89.6 0.23 7.9E-06 48.7 4.1 33 44-76 6-38 (299)
371 3pef_A 6-phosphogluconate dehy 89.6 0.25 8.5E-06 48.3 4.3 33 45-77 3-35 (287)
372 3pid_A UDP-glucose 6-dehydroge 89.5 0.22 7.6E-06 51.6 4.0 33 44-77 37-69 (432)
373 2izz_A Pyrroline-5-carboxylate 89.5 0.33 1.1E-05 48.3 5.1 35 43-77 22-60 (322)
374 3ggo_A Prephenate dehydrogenas 89.4 0.29 1E-05 48.6 4.6 33 44-76 34-68 (314)
375 1z82_A Glycerol-3-phosphate de 89.4 0.29 1E-05 49.0 4.7 35 42-76 13-47 (335)
376 3vtf_A UDP-glucose 6-dehydroge 89.3 0.28 9.7E-06 50.9 4.6 34 44-77 22-55 (444)
377 3k6j_A Protein F01G10.3, confi 89.2 0.3 1E-05 51.0 4.8 34 44-77 55-88 (460)
378 2eez_A Alanine dehydrogenase; 89.2 0.29 1E-05 49.8 4.6 33 44-76 167-199 (369)
379 3orq_A N5-carboxyaminoimidazol 89.2 0.44 1.5E-05 48.6 5.9 35 43-77 12-46 (377)
380 1oju_A MDH, malate dehydrogena 89.1 0.23 7.8E-06 48.9 3.5 32 45-76 2-35 (294)
381 3h8v_A Ubiquitin-like modifier 89.0 0.31 1E-05 47.8 4.4 35 42-76 35-70 (292)
382 3dtt_A NADP oxidoreductase; st 88.9 0.27 9.3E-06 46.8 3.9 35 43-77 19-53 (245)
383 1zcj_A Peroxisomal bifunctiona 88.9 0.37 1.3E-05 50.6 5.2 33 45-77 39-71 (463)
384 3o0h_A Glutathione reductase; 88.9 0.32 1.1E-05 51.4 4.8 99 43-238 191-289 (484)
385 2pv7_A T-protein [includes: ch 88.9 0.52 1.8E-05 46.3 6.0 33 45-77 23-56 (298)
386 1sez_A Protoporphyrinogen oxid 88.8 11 0.00038 39.3 16.8 47 189-237 256-308 (504)
387 3phh_A Shikimate dehydrogenase 88.8 0.38 1.3E-05 46.5 4.8 34 44-77 119-152 (269)
388 3h8l_A NADH oxidase; membrane 88.7 1.2 4E-05 45.6 8.9 36 359-397 300-335 (409)
389 3ldh_A Lactate dehydrogenase; 88.7 0.48 1.7E-05 47.2 5.6 33 44-76 22-56 (330)
390 3pdu_A 3-hydroxyisobutyrate de 88.6 0.28 9.7E-06 47.8 3.9 33 45-77 3-35 (287)
391 3nep_X Malate dehydrogenase; h 88.6 0.34 1.2E-05 48.1 4.4 33 45-77 2-36 (314)
392 2rcy_A Pyrroline carboxylate r 88.6 0.41 1.4E-05 45.8 5.0 35 44-78 5-43 (262)
393 3gpi_A NAD-dependent epimerase 88.6 0.48 1.6E-05 45.8 5.5 35 44-78 4-38 (286)
394 2zyd_A 6-phosphogluconate dehy 88.5 0.34 1.2E-05 51.1 4.7 37 41-77 13-49 (480)
395 2vhw_A Alanine dehydrogenase; 88.5 0.35 1.2E-05 49.4 4.6 33 44-76 169-201 (377)
396 3vku_A L-LDH, L-lactate dehydr 88.5 0.35 1.2E-05 48.2 4.5 34 42-75 8-43 (326)
397 1txg_A Glycerol-3-phosphate de 88.5 0.31 1.1E-05 48.6 4.1 30 45-74 2-31 (335)
398 2a9f_A Putative malic enzyme ( 88.5 0.32 1.1E-05 49.4 4.1 35 41-75 186-221 (398)
399 3q2o_A Phosphoribosylaminoimid 88.4 0.47 1.6E-05 48.5 5.5 34 44-77 15-48 (389)
400 1zud_1 Adenylyltransferase THI 88.4 0.35 1.2E-05 46.3 4.2 34 43-76 28-62 (251)
401 3d0o_A L-LDH 1, L-lactate dehy 88.3 0.36 1.2E-05 48.0 4.5 33 43-75 6-40 (317)
402 4ezb_A Uncharacterized conserv 88.2 0.22 7.6E-06 49.5 2.9 34 44-77 25-59 (317)
403 3ond_A Adenosylhomocysteinase; 88.2 0.33 1.1E-05 50.9 4.2 33 44-76 266-298 (488)
404 1nyt_A Shikimate 5-dehydrogena 88.2 0.42 1.4E-05 46.3 4.7 33 44-76 120-152 (271)
405 4gx0_A TRKA domain protein; me 88.0 0.44 1.5E-05 51.4 5.2 36 44-79 349-384 (565)
406 3cky_A 2-hydroxymethyl glutara 88.0 0.3 1E-05 47.9 3.6 33 44-76 5-37 (301)
407 3dgh_A TRXR-1, thioredoxin red 87.9 0.36 1.2E-05 50.9 4.4 101 43-236 187-288 (483)
408 1ez4_A Lactate dehydrogenase; 87.8 0.41 1.4E-05 47.6 4.5 34 42-75 4-39 (318)
409 1zej_A HBD-9, 3-hydroxyacyl-CO 87.8 0.36 1.2E-05 47.4 4.0 35 42-77 11-45 (293)
410 3don_A Shikimate dehydrogenase 87.8 0.39 1.3E-05 46.7 4.2 36 43-78 117-153 (277)
411 2we8_A Xanthine dehydrogenase; 87.8 0.51 1.8E-05 48.1 5.2 37 43-79 204-240 (386)
412 2egg_A AROE, shikimate 5-dehyd 87.7 0.45 1.5E-05 46.8 4.7 33 44-76 142-175 (297)
413 1a5z_A L-lactate dehydrogenase 87.6 0.38 1.3E-05 47.8 4.1 32 45-76 2-35 (319)
414 2f1k_A Prephenate dehydrogenas 87.5 0.47 1.6E-05 45.9 4.6 32 45-76 2-33 (279)
415 3ius_A Uncharacterized conserv 87.5 0.4 1.4E-05 46.4 4.1 33 44-76 6-38 (286)
416 1ldn_A L-lactate dehydrogenase 87.5 0.47 1.6E-05 47.1 4.7 33 44-76 7-41 (316)
417 1dlj_A UDP-glucose dehydrogena 87.5 0.38 1.3E-05 49.6 4.1 32 45-77 2-33 (402)
418 4ffl_A PYLC; amino acid, biosy 87.4 0.48 1.6E-05 47.8 4.8 34 45-78 3-36 (363)
419 1jay_A Coenzyme F420H2:NADP+ o 87.3 0.46 1.6E-05 43.8 4.3 32 45-76 2-34 (212)
420 2q3e_A UDP-glucose 6-dehydroge 87.2 0.38 1.3E-05 50.6 4.0 34 44-77 6-41 (467)
421 3c24_A Putative oxidoreductase 87.2 0.57 2E-05 45.6 5.1 33 44-76 12-45 (286)
422 2gf2_A Hibadh, 3-hydroxyisobut 87.2 0.53 1.8E-05 45.9 4.8 33 45-77 2-34 (296)
423 1vl6_A Malate oxidoreductase; 87.2 0.42 1.5E-05 48.4 4.1 35 41-75 190-225 (388)
424 3rui_A Ubiquitin-like modifier 87.1 0.58 2E-05 46.7 5.0 35 43-77 34-69 (340)
425 1evy_A Glycerol-3-phosphate de 87.1 0.36 1.2E-05 48.9 3.7 32 45-76 17-48 (366)
426 4a9w_A Monooxygenase; baeyer-v 87.0 0.44 1.5E-05 47.4 4.2 32 44-76 164-195 (357)
427 4gwg_A 6-phosphogluconate dehy 87.0 0.63 2.2E-05 49.0 5.5 34 44-77 5-38 (484)
428 3gvp_A Adenosylhomocysteinase 86.9 0.45 1.5E-05 49.0 4.2 33 44-76 221-253 (435)
429 3i6i_A Putative leucoanthocyan 86.9 0.6 2E-05 46.7 5.2 33 44-76 11-44 (346)
430 1x0v_A GPD-C, GPDH-C, glycerol 86.9 0.3 1E-05 49.1 3.0 34 44-77 9-49 (354)
431 2cvz_A Dehydrogenase, 3-hydrox 86.8 0.54 1.8E-05 45.7 4.6 31 45-76 3-33 (289)
432 3ce6_A Adenosylhomocysteinase; 86.7 0.45 1.5E-05 50.2 4.2 33 44-76 275-307 (494)
433 3tri_A Pyrroline-5-carboxylate 86.6 0.72 2.5E-05 44.9 5.4 34 44-77 4-40 (280)
434 1yj8_A Glycerol-3-phosphate de 86.5 0.48 1.7E-05 48.2 4.3 33 45-77 23-62 (375)
435 2p4q_A 6-phosphogluconate dehy 86.5 0.69 2.3E-05 49.0 5.5 35 43-77 10-44 (497)
436 3uko_A Alcohol dehydrogenase c 86.4 0.61 2.1E-05 47.4 5.0 34 44-77 195-229 (378)
437 2pgd_A 6-phosphogluconate dehy 86.4 0.67 2.3E-05 48.9 5.4 34 44-77 3-36 (482)
438 1np3_A Ketol-acid reductoisome 86.4 0.79 2.7E-05 45.9 5.7 34 44-77 17-50 (338)
439 1pjq_A CYSG, siroheme synthase 86.4 0.49 1.7E-05 49.6 4.3 33 43-75 12-44 (457)
440 3ew7_A LMO0794 protein; Q8Y8U8 86.3 0.59 2E-05 43.0 4.5 32 45-76 2-34 (221)
441 2h78_A Hibadh, 3-hydroxyisobut 86.2 0.5 1.7E-05 46.4 4.1 32 45-76 5-36 (302)
442 3e8x_A Putative NAD-dependent 86.2 0.52 1.8E-05 44.2 4.0 34 44-77 22-56 (236)
443 4b63_A L-ornithine N5 monooxyg 86.0 4.8 0.00016 42.5 11.9 35 44-78 247-283 (501)
444 3u62_A Shikimate dehydrogenase 86.0 0.73 2.5E-05 44.1 5.0 33 45-77 110-143 (253)
445 3two_A Mannitol dehydrogenase; 86.0 0.66 2.2E-05 46.6 4.9 34 44-77 178-211 (348)
446 1yqg_A Pyrroline-5-carboxylate 85.9 0.56 1.9E-05 44.9 4.2 32 45-76 2-34 (263)
447 2g5c_A Prephenate dehydrogenas 85.9 0.62 2.1E-05 45.1 4.5 32 45-76 3-36 (281)
448 3vps_A TUNA, NAD-dependent epi 85.8 0.75 2.6E-05 45.0 5.2 34 44-77 8-42 (321)
449 2d4a_B Malate dehydrogenase; a 85.8 0.72 2.5E-05 45.6 4.9 32 45-76 1-33 (308)
450 1hyh_A L-hicdh, L-2-hydroxyiso 85.6 0.56 1.9E-05 46.3 4.1 32 45-76 3-36 (309)
451 2i6t_A Ubiquitin-conjugating e 85.5 0.59 2E-05 46.1 4.1 34 44-77 15-50 (303)
452 3gt0_A Pyrroline-5-carboxylate 85.5 0.73 2.5E-05 43.7 4.7 34 44-77 3-40 (247)
453 4e4t_A Phosphoribosylaminoimid 85.4 0.89 3.1E-05 47.0 5.7 35 43-77 35-69 (419)
454 2x6t_A ADP-L-glycero-D-manno-h 85.4 0.77 2.6E-05 46.0 5.1 34 44-77 47-82 (357)
455 4aj2_A L-lactate dehydrogenase 85.4 0.77 2.6E-05 45.8 5.0 33 43-75 19-53 (331)
456 1b8p_A Protein (malate dehydro 85.4 0.51 1.7E-05 47.1 3.7 33 43-75 5-45 (329)
457 2hk9_A Shikimate dehydrogenase 85.4 0.59 2E-05 45.3 4.0 33 44-76 130-162 (275)
458 3d4o_A Dipicolinate synthase s 85.3 0.68 2.3E-05 45.3 4.5 33 44-76 156-188 (293)
459 3jyo_A Quinate/shikimate dehyd 85.3 0.75 2.6E-05 44.8 4.7 33 44-76 128-161 (283)
460 2wtb_A MFP2, fatty acid multif 85.2 0.61 2.1E-05 51.9 4.5 33 45-77 314-346 (725)
461 3c7a_A Octopine dehydrogenase; 85.2 0.47 1.6E-05 48.8 3.4 30 45-74 4-34 (404)
462 1hdo_A Biliverdin IX beta redu 85.1 0.74 2.5E-05 41.7 4.4 35 44-78 4-39 (206)
463 2o3j_A UDP-glucose 6-dehydroge 85.1 0.56 1.9E-05 49.5 4.0 34 44-77 10-45 (481)
464 3h2s_A Putative NADH-flavin re 85.0 0.72 2.5E-05 42.6 4.4 32 45-76 2-34 (224)
465 2r6j_A Eugenol synthase 1; phe 85.0 0.84 2.9E-05 44.9 5.1 33 45-77 13-46 (318)
466 3tnl_A Shikimate dehydrogenase 84.9 0.75 2.6E-05 45.6 4.6 33 44-76 155-188 (315)
467 2iz1_A 6-phosphogluconate dehy 84.9 0.91 3.1E-05 47.8 5.5 34 44-77 6-39 (474)
468 3o38_A Short chain dehydrogena 84.9 0.91 3.1E-05 43.4 5.1 33 44-76 23-57 (266)
469 2d5c_A AROE, shikimate 5-dehyd 84.8 0.94 3.2E-05 43.5 5.1 32 45-76 118-149 (263)
470 4gsl_A Ubiquitin-like modifier 84.8 0.75 2.6E-05 49.4 4.8 34 43-76 326-360 (615)
471 3fi9_A Malate dehydrogenase; s 84.7 0.94 3.2E-05 45.4 5.2 33 44-76 9-44 (343)
472 1pgj_A 6PGDH, 6-PGDH, 6-phosph 84.7 0.87 3E-05 48.0 5.2 32 45-76 3-34 (478)
473 1piw_A Hypothetical zinc-type 84.7 0.68 2.3E-05 46.7 4.3 34 44-77 181-214 (360)
474 2rir_A Dipicolinate synthase, 84.6 0.76 2.6E-05 45.1 4.5 33 44-76 158-190 (300)
475 1gpj_A Glutamyl-tRNA reductase 84.6 0.68 2.3E-05 47.6 4.3 33 44-76 168-201 (404)
476 3h5n_A MCCB protein; ubiquitin 84.6 0.72 2.5E-05 46.5 4.4 34 43-76 118-152 (353)
477 2zqz_A L-LDH, L-lactate dehydr 84.6 0.79 2.7E-05 45.7 4.6 33 43-75 9-43 (326)
478 3k5i_A Phosphoribosyl-aminoimi 84.6 0.73 2.5E-05 47.4 4.5 33 43-76 24-56 (403)
479 1p77_A Shikimate 5-dehydrogena 84.6 0.57 1.9E-05 45.4 3.5 33 44-76 120-152 (272)
480 1kjq_A GART 2, phosphoribosylg 84.4 0.92 3.2E-05 46.1 5.2 35 43-77 11-45 (391)
481 1y8q_A Ubiquitin-like 1 activa 84.1 0.76 2.6E-05 46.2 4.3 34 43-76 36-70 (346)
482 4b4o_A Epimerase family protei 84.1 0.89 3E-05 44.2 4.7 34 45-78 2-36 (298)
483 3ojo_A CAP5O; rossmann fold, c 84.1 0.57 2E-05 48.6 3.4 34 44-77 12-45 (431)
484 1nvt_A Shikimate 5'-dehydrogen 84.1 0.74 2.5E-05 44.9 4.1 32 44-76 129-160 (287)
485 3k31_A Enoyl-(acyl-carrier-pro 83.9 1.1 3.9E-05 43.7 5.4 33 44-76 31-66 (296)
486 3dhn_A NAD-dependent epimerase 83.9 0.69 2.4E-05 42.9 3.7 35 44-78 5-40 (227)
487 1npy_A Hypothetical shikimate 83.9 0.92 3.1E-05 43.9 4.6 33 44-76 120-153 (271)
488 3pwz_A Shikimate dehydrogenase 83.8 1 3.4E-05 43.7 4.8 33 44-76 121-154 (272)
489 3fbt_A Chorismate mutase and s 83.7 0.71 2.4E-05 44.9 3.7 33 44-76 123-156 (282)
490 1uuf_A YAHK, zinc-type alcohol 83.6 0.76 2.6E-05 46.6 4.1 34 44-77 196-229 (369)
491 2cf5_A Atccad5, CAD, cinnamyl 83.6 0.82 2.8E-05 46.1 4.3 34 44-77 182-215 (357)
492 1yqd_A Sinapyl alcohol dehydro 83.5 0.79 2.7E-05 46.4 4.2 34 44-77 189-222 (366)
493 3t4e_A Quinate/shikimate dehyd 83.5 0.87 3E-05 45.0 4.3 33 44-76 149-182 (312)
494 2d8a_A PH0655, probable L-thre 83.4 1.1 3.8E-05 44.8 5.2 33 44-76 169-202 (348)
495 3enk_A UDP-glucose 4-epimerase 83.3 1.2 4E-05 44.2 5.3 35 44-78 6-41 (341)
496 3tjr_A Short chain dehydrogena 83.3 1.1 3.8E-05 43.9 5.1 47 30-76 16-65 (301)
497 3fpc_A NADP-dependent alcohol 83.2 0.95 3.2E-05 45.4 4.6 33 44-76 168-201 (352)
498 3awd_A GOX2181, putative polyo 83.1 1.1 3.9E-05 42.4 4.9 33 44-76 14-47 (260)
499 3sxp_A ADP-L-glycero-D-mannohe 82.8 1.4 4.9E-05 44.1 5.8 35 43-77 10-47 (362)
500 3o8q_A Shikimate 5-dehydrogena 82.8 1 3.5E-05 43.8 4.5 33 44-76 127-160 (281)
No 1
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=7.8e-49 Score=429.67 Aligned_cols=363 Identities=31% Similarity=0.463 Sum_probs=297.7
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 40 ~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
++.++||+||||||+||++|+.|+++|++|+||||.+.+...++++.++++++++|+++ |+.+++.+.+.+......+.
T Consensus 2 ~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~l-Gl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 2 NDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIG-GVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHT-TCHHHHHHSCCSSCTTSCCE
T ss_pred CCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHc-CCHHHHHhhCCCccccccee
Confidence 34568999999999999999999999999999999999988999999999999999999 99999999887766555554
Q ss_pred --eeeCCCCCeeeeecCCCcc---ccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEec
Q 008258 120 --YCTSVTGPILGSVDHMQPQ---DFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMG 194 (572)
Q Consensus 120 --~~~~~~G~~~~~~~~~~~~---~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g 194 (572)
++....|..+.+....... .+ ...+|.....++|..|++.|.+.+.+.|+ +++++
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~ 140 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAAT-EPCTPAGWAMLSQDKLEPILLAQARKHGG-------------------AIRFG 140 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTT-GGGCSCCCBCCCHHHHHHHHHHHHHHTTC-------------------EEESS
T ss_pred eeEEeccCCceeeecccccccccccc-ccCCCCcccccCHHHHHHHHHHHHHhCCC-------------------EEEeC
Confidence 6666777776643211110 01 11245556789999999999999998887 99999
Q ss_pred cEEEEEeeeCC----eEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCcccccc
Q 008258 195 HECVSVSATDQ----CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYL 270 (572)
Q Consensus 195 ~~v~~v~~~~~----~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~ 270 (572)
++|++++++++ +|++++. ++.+ +.+++||+||+|||++|.||+++|+++.+....+..+.+.+.. ++..+.
T Consensus 141 ~~v~~i~~~~~~~~~~v~v~~~---~~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~-~~~~~~ 215 (535)
T 3ihg_A 141 TRLLSFRQHDDDAGAGVTARLA---GPDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDA-DLSGIM 215 (535)
T ss_dssp CEEEEEEEECGGGCSEEEEEEE---ETTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEEC-CGGGTS
T ss_pred CEEEEEEECCCCccccEEEEEE---cCCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEec-cChhhc
Confidence 99999999998 9988887 3322 4589999999999999999999999988887776677666654 444332
Q ss_pred ccCCCceEEEEEecCceEEEEEecCCCCeEEEEeecCCCC-CCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCccccce
Q 008258 271 LNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAE 349 (572)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w~~~~~ 349 (572)
..++...+++++|+..+++++.+. .+.|.+.+++.+.. ....+++++.+.+.+++.++.....+++.....|++...
T Consensus 216 -~~~~~~~~~~~~p~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 293 (535)
T 3ihg_A 216 -EPGTTGWYYLHHPEFKGTFGPTDR-PDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPELVDIQGWEMAAR 293 (535)
T ss_dssp -CTTCCEEEEEECSSCEEEEEECSS-TTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEEEEEEEEEEEEE
T ss_pred -cCCceEEEEEECCCceEEEEEecC-CCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeEEEeeEeeeeEE
Confidence 344556777778887776665553 36677776654433 334567888899999999887666778888889999999
Q ss_pred ecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHH
Q 008258 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (572)
Q Consensus 350 ~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~ 429 (572)
++++|. +|||+|+|||||.++|++|||||+||+||++|+|+|+.++++.+.+.+|++|++||+|+++.+++.|.++++
T Consensus 294 ~a~~~~--~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~ 371 (535)
T 3ihg_A 294 IAERWR--EGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVAAELVVAEALAIYA 371 (535)
T ss_dssp EESCSE--ETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECccc--cCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHHHHHHHHHHHHhhH
Confidence 999998 599999999999999999999999999999999999999999889999999999999999999999999887
Q ss_pred Hhc
Q 008258 430 AAM 432 (572)
Q Consensus 430 ~~~ 432 (572)
...
T Consensus 372 ~~~ 374 (535)
T 3ihg_A 372 QRM 374 (535)
T ss_dssp HHT
T ss_pred hhc
Confidence 653
No 2
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=2.4e-48 Score=426.30 Aligned_cols=355 Identities=29% Similarity=0.425 Sum_probs=269.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
.++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+.+++.+.+.+........+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~l-Gl~~~~~~~~~~~~~~~~~~~~ 103 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRW-GVAKQIRTAGWPGDHPLDAAWV 103 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHT-TCHHHHHTSSCCTTSBCCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHc-CChHHHHhhcCCcccccceEEe
Confidence 468999999999999999999999999999999998888899999999999999999 9999999887766433334455
Q ss_pred eCCCCCeeeeecCCCccc-cccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 122 TSVTGPILGSVDHMQPQD-FEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~-~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.+..|..+.+.+...... .....++.....++|..|+++|.+.+.+ . |+++++|+++
T Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~---------------------~-v~~~~~v~~~ 161 (549)
T 2r0c_A 104 TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGE---------------------R-LRTRSRLDSF 161 (549)
T ss_dssp SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGG---------------------G-EECSEEEEEE
T ss_pred ccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHH---------------------h-cccCcEEEEE
Confidence 556676655443211100 0001234445778999999999998855 1 7899999999
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEEE
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 280 (572)
++++++|++++...++| ++++++||+||+|||++|.||+++|+++.+....+.++.+.+..+++...+ ...+...++
T Consensus 162 ~~~~~~v~v~~~~~~~G--~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (549)
T 2r0c_A 162 EQRDDHVRATITDLRTG--ATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLL-GERAALFFF 238 (549)
T ss_dssp EECSSCEEEEEEETTTC--CEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHH-GGGCCSEEE
T ss_pred EEeCCEEEEEEEECCCC--CEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhc-CCCCceEEE
Confidence 99999999888743234 345799999999999999999999999888776666666666543332221 223456677
Q ss_pred EEecC-ceEEEEEecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCccccceecccccccCC
Q 008258 281 IFNTE-AIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYN 359 (572)
Q Consensus 281 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w~~~~~~a~~~~~~~g 359 (572)
+++|+ ...++++.+. ...|.+.++.. .. . ++++.+.+.+++.++.. ...++.....|.+..+++++|. .|
T Consensus 239 ~~~p~~~~~~~~p~~~-~~~~~~~~~~~-~~---~-~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~--~g 309 (549)
T 2r0c_A 239 LMLSSSLRFPLRALDG-RGLYRLTVGVD-DA---S-KSTMDSFELVRRAVAFD-TEIEVLSDSEWHLTHRVADSFS--AG 309 (549)
T ss_dssp EEEETTEEEEEEESSS-SSEEEEEEECS-TT---C-CSCCCHHHHHHHHBCSC-CCCEEEEEEEEEECCEECSCSE--ET
T ss_pred EECCCCcEEEEEEECC-CcEEEEEecCC-CC---C-CCHHHHHHHHHHHhCCC-CceeEEEEecchhHhhhHHhhc--CC
Confidence 77777 4455555432 35676665421 11 1 45556778888888763 3456777778998889999997 59
Q ss_pred cEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHHHh
Q 008258 360 QIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAA 431 (572)
Q Consensus 360 rV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~~~ 431 (572)
||+|+|||||.|+|++|||||+||+||+||+|||+.+++|.+.+.+|++|++||+|+++.+++.+..+.+.+
T Consensus 310 rv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~ 381 (549)
T 2r0c_A 310 RVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPVAITSLEEANVNLRRT 381 (549)
T ss_dssp TEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHHHHHHHHC--------
T ss_pred cEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999988899999999999999999998887665443
No 3
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=3.6e-46 Score=404.12 Aligned_cols=337 Identities=22% Similarity=0.270 Sum_probs=252.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+.+++.+. .+ +....+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~---~~~~~~ 83 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQR-GILPRFGEV-ET---STQGHF 83 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTT-TCGGGGCSC-CB---CCEEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHC-CCHHHHHhc-cc---cccccc
Confidence 5568999999999999999999999999999999999888899999999999999999 998877654 22 111111
Q ss_pred eeCCCCCeeeeecCCCccccccccCCcc-ccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVS-VAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~-~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
.+.. ++ +.....+.. .+.++|..|+++|.+.+.+.|+ +|+++++|++
T Consensus 84 ----~~~~---~~------~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~ 131 (500)
T 2qa1_A 84 ----GGLP---ID------FGVLEGAWQAAKTVPQSVTETHLEQWATGLGA-------------------DIRRGHEVLS 131 (500)
T ss_dssp ----TTEE---EE------GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC-------------------EEEETCEEEE
T ss_pred ----ccee---cc------cccCCCCCCceeecCHHHHHHHHHHHHHHCCC-------------------EEECCcEEEE
Confidence 1111 11 000011121 3678999999999999998886 8999999999
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEE
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (572)
+++++++|++++. ++++ +++++||+||||||++|.||+++|+++.+......++...+...+ .+...+
T Consensus 132 i~~~~~~v~v~~~---~~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 199 (500)
T 2qa1_A 132 LTDDGAGVTVEVR---GPEG-KHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE--------LQPRMI 199 (500)
T ss_dssp EEEETTEEEEEEE---ETTE-EEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC--------CCCEEE
T ss_pred EEEcCCeEEEEEE---cCCC-CEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC--------CCCceE
Confidence 9999999998887 3433 457999999999999999999999988876655444444433211 122245
Q ss_pred EEEecCceEEEEEecCCCCeEEEEeecCCC--CCCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCccccceeccccccc
Q 008258 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPP--QQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCC 357 (572)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w~~~~~~a~~~~~~ 357 (572)
+++.|+...++++.+ .+.+.+.+....+ .......+.+.+.+.+++.++......++.....|....+.+++|.
T Consensus 200 ~~~~~~g~~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-- 275 (500)
T 2qa1_A 200 GETLPGGMVMVGPLP--GGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYR-- 275 (500)
T ss_dssp EEEETTEEEEEEEET--TTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCTTSEEEEEEEEECCEEECSCSE--
T ss_pred EEECCCcEEEEEEcC--CCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCCccceeEEEEeccCcEEccccc--
Confidence 566676554444443 3444444332121 1122446788888888888875443334444456777788899997
Q ss_pred CCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHHH
Q 008258 358 YNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRA 430 (572)
Q Consensus 358 ~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~~ 430 (572)
+|||+|+|||||.|+|++|||||+||+||+||+|||+.+++|.+.+.+|++|++||+|+++.++..+....+.
T Consensus 276 ~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l 348 (500)
T 2qa1_A 276 RGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAVGKRLLMNTQAQGLL 348 (500)
T ss_dssp ETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999998889999999999999999998887655443
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=3e-46 Score=404.64 Aligned_cols=337 Identities=23% Similarity=0.270 Sum_probs=253.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+.+++.+. .+ +....+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~---~~~~~~ 84 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQR-GILPAFGPV-ET---STQGHF 84 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHT-TCGGGGCSC-CE---ESEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHC-CCHHHHHhc-cc---ccccee
Confidence 4568999999999999999999999999999999999888899999999999999999 998877654 22 111111
Q ss_pred eeCCCCCeeeeecCCCccccccccCCcc-ccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVS-VAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~-~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
.+.. ++ +.....+.. ...++|..|+++|.+.+.+.|+ +|++++++++
T Consensus 85 ----~~~~---~~------~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~ 132 (499)
T 2qa2_A 85 ----GGRP---VD------FGVLEGAHYGVKAVPQSTTESVLEEWALGRGA-------------------ELLRGHTVRA 132 (499)
T ss_dssp ----TTEE---EE------GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEE
T ss_pred ----ccee---cc------cccCCCCCCceEecCHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEE
Confidence 1111 11 110011222 3678999999999999998876 8999999999
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEE
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (572)
+++++++|++++. ++++ +++++||+||||||++|.||+++|+++.+......++...+...+ .+...+
T Consensus 133 i~~~~~~v~v~~~---~~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~--------~~~~~~ 200 (499)
T 2qa2_A 133 LTDEGDHVVVEVE---GPDG-PRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE--------ITPRPI 200 (499)
T ss_dssp EEECSSCEEEEEE---CSSC-EEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC--------CCCEEE
T ss_pred EEEeCCEEEEEEE---cCCC-cEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC--------CCcceE
Confidence 9999999998887 4433 457999999999999999999999988876654444444433211 122245
Q ss_pred EEEecCceEEEEEecCCCCeEEEEeecCCC--CCCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCccccceeccccccc
Q 008258 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPP--QQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCC 357 (572)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w~~~~~~a~~~~~~ 357 (572)
+++.|+...++++.+ .+.+.+.+....+ .......+.+.+.+.+++.++......++.....|+...+.+++|.
T Consensus 201 ~~~~~~g~~~~~P~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-- 276 (499)
T 2qa2_A 201 GETVPLGMVMSAPLG--DGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYR-- 276 (499)
T ss_dssp EEEETTEEEEEEECS--SSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCTTCEEEEEEEECCCEEECSCSE--
T ss_pred EEECCCeEEEEEEcC--CCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCCccceeEEEEEeCCcEEccccc--
Confidence 566676544444443 3444444332111 1222456788888888888875443334444456777788899997
Q ss_pred CCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHHH
Q 008258 358 YNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRA 430 (572)
Q Consensus 358 ~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~~ 430 (572)
+|||+|+|||||.|+|++|||||+||+||+||+|+|+.+++|.+.+.+|++|++||+|+++.++..+....+.
T Consensus 277 ~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l 349 (499)
T 2qa2_A 277 RGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGML 349 (499)
T ss_dssp ETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999988889999999999999999998887655443
No 5
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=1.9e-45 Score=410.70 Aligned_cols=358 Identities=24% Similarity=0.343 Sum_probs=249.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh-----CCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccc
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTK-----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLW 115 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~-----~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~ 115 (572)
..++||+||||||+||++|+.|++ +|++|+||||++.+...++++.++++++++|+++ |+++++.+.+.+...+
T Consensus 6 ~~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~l-Gl~~~l~~~~~~~~~~ 84 (665)
T 1pn0_A 6 ESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNL-GLADKILSEANDMSTI 84 (665)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTT-TCHHHHHTTCBCCCEE
T ss_pred CCCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHC-CCHHHHHHhccccceE
Confidence 446899999999999999999999 9999999999998888899999999999999999 9999998877665332
Q ss_pred cceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEecc
Q 008258 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (572)
Q Consensus 116 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~ 195 (572)
. .|..+..|.... ...... .....++.....++|..|+++|++.+.+.|. .+++|++++
T Consensus 85 ~--~~~~~~~g~i~~-~~~~~~--~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~----------------~~v~v~~g~ 143 (665)
T 1pn0_A 85 A--LYNPDENGHIRR-TDRIPD--TLPGISRYHQVVLHQGRIERRILDSIAEISD----------------TRIKVERPL 143 (665)
T ss_dssp E--EEEECTTSCEEE-EEEEES--SCTTSCSSCCEECCHHHHHHHHHHHHHHHHT----------------TSSCEECSE
T ss_pred E--EEeCCCCcceEe-ecccCc--ccCCCCCCeeEEeeHHHHHHHHHHHHHhcCC----------------CceEEEeCC
Confidence 2 233333343221 110000 0001233445679999999999999988760 013899999
Q ss_pred EEEEEeeeC--------CeEEEEEEec---------------------------------------cCCceeeEEEEecE
Q 008258 196 ECVSVSATD--------QCINVIASFL---------------------------------------KEGKCTERNIQCNI 228 (572)
Q Consensus 196 ~v~~v~~~~--------~~v~v~~~~~---------------------------------------~~g~~~~~~i~ad~ 228 (572)
+++++++++ ++|++++... .+| .+++++|||
T Consensus 144 ~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G--~~~~i~A~~ 221 (665)
T 1pn0_A 144 IPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAG--EIETVHCKY 221 (665)
T ss_dssp EEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTT--CEEEEEEEE
T ss_pred EEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCC--ceEEEEeCE
Confidence 999998875 5788887641 123 345799999
Q ss_pred EEeecCCChhhhhhcCCccccccCcceEEEEEEec-CccccccccCCCceEEEEEe-cCceEEEEEecCCCCeEEEEeec
Q 008258 229 LIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGDYLLNERPGMLFFIFN-TEAIGVLVAHDLKEGEFILQVPF 306 (572)
Q Consensus 229 vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 306 (572)
||||||++|.||+++|+++.|......+..+.... .++. . .....++.. +....++++.+....++++.++.
T Consensus 222 VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p-----~-~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~ 295 (665)
T 1pn0_A 222 VIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFP-----D-IRSRCAIHSAESGSIMIIPRENNLVRFYVQLQA 295 (665)
T ss_dssp EEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCT-----T-TTSEEEEECSSSCEEEEEECSTTCEEEEEEECC
T ss_pred EEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCC-----C-cceEEEEEeCCCceEEEEEcCCCEEEEEEEeCC
Confidence 99999999999999999887765443332222211 1111 1 111222222 34433444443222233333332
Q ss_pred CC---CCCCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCc---cccceecccccccCCcEEEEecccccCCCCCCCCch
Q 008258 307 YP---PQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPW---VMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMN 380 (572)
Q Consensus 307 ~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w---~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n 380 (572)
.. ........+++.+.+.+++.++... +++..+.+| ++..+++++|.. .|||+|+|||||.|+|++|||||
T Consensus 296 ~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~a~~~~~-~gRV~L~GDAAH~~~P~~GqG~N 372 (665)
T 1pn0_A 296 RAEKGGRVDRTKFTPEVVIANAKKIFHPYT--FDVQQLDWFTAYHIGQRVTEKFSK-DERVFIAGDACHTHSPKAGQGMN 372 (665)
T ss_dssp ----------CCCCHHHHHHHHHHHHTTSC--CEEEEEEEEEEEEEEEEECSCSEE-TTTEEECGGGTEECCSTTCCHHH
T ss_pred ccccccccCcCCCCHHHHHHHHHHHhCccc--CceeeEEEEEeeeccceehhhccc-CCCEEEEECccccCCCcccCCcc
Confidence 11 1112345678888888888776422 233333333 456778899962 49999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHHHh
Q 008258 381 TGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAA 431 (572)
Q Consensus 381 ~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~~~ 431 (572)
+||+||+||+|||+.+++|.+.+.+|++|++||+|+++.++..+....+.+
T Consensus 373 ~gi~DA~nLawkLa~vl~g~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~ 423 (665)
T 1pn0_A 373 TSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRLF 423 (665)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988899999999999999999888776554433
No 6
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=4e-43 Score=391.28 Aligned_cols=351 Identities=23% Similarity=0.330 Sum_probs=242.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~-~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
+.++||+||||||+||++|+.|++ +|++|+||||++.+...++++.++++++++|+++ |+.+++.+.+.+..... .
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~l-Gl~~~~~~~~~~~~~~~--~ 106 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAF-EFADSILKEACWINDVT--F 106 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHT-TCHHHHHHHSEEECEEE--E
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHc-CcHHHHHHhcccccceE--E
Confidence 346899999999999999999999 9999999999999888899999999999999999 99999887665543221 1
Q ss_pred eeeC--CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEE
Q 008258 120 YCTS--VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (572)
Q Consensus 120 ~~~~--~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v 197 (572)
+..+ ..|.... ...... .....++.....++|..|+++|.+.+.+.|+ +++|+++++|
T Consensus 107 ~~~~~~~~g~~~~-~~~~~~--~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~-----------------~v~v~~~~~v 166 (639)
T 2dkh_A 107 WKPDPGQPGRIAR-HGRVQD--TEDGLSEFPHVILNQARVHDHYLERMRNSPS-----------------RLEPHYARRV 166 (639)
T ss_dssp EEECTTSTTCEEE-EEEEES--SCTTSCSSCEEECCHHHHHHHHHHHHHHSTT-----------------CCCCBCSEEE
T ss_pred ECCCCCCCcceEe-ecccCc--ccCCCCCCceEeeCHHHHHHHHHHHHHhCCC-----------------CcEEecCCEE
Confidence 2111 1233221 110000 0001123334678999999999999998763 2378899999
Q ss_pred EEEeeeCC----eEEEEEEec---cCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEec-Cccccc
Q 008258 198 VSVSATDQ----CINVIASFL---KEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGDY 269 (572)
Q Consensus 198 ~~v~~~~~----~v~v~~~~~---~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~-~~l~~~ 269 (572)
++++++++ +|+|++... .+| .+++++||+||||||++|.||+++|+++.+......+..+.... .++..
T Consensus 167 ~~l~~~~~~~~~~v~v~~~~~~~~~~G--~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~- 243 (639)
T 2dkh_A 167 LDVKVDHGAADYPVTVTLERCDAAHAG--QIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPD- 243 (639)
T ss_dssp EEEEECTTCSSCCEEEEEEECSGGGTT--CEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTT-
T ss_pred EEEEECCCCCcCCEEEEEEeccccCCC--CeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCc-
Confidence 99998763 688877631 134 24579999999999999999999999887766544333222211 11111
Q ss_pred cccCCCceEEEEEecCceEEEEEecCCCC-eEEEEeecCC--CC--CCCCCCCHHHHHHHHHHHhCCCCCceeEEEec--
Q 008258 270 LLNERPGMLFFIFNTEAIGVLVAHDLKEG-EFILQVPFYP--PQ--QNLEDFSPEICEKLIFKLVGWELSDIDVIDIK-- 342 (572)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~-- 342 (572)
.+ . ...+..+....++++.+ .+ .+.+.+.... +. ......+.+.+.+.+++.++.. .+++..+.
T Consensus 244 ---~~-~-~~~~~~~~g~~~~~P~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~ 314 (639)
T 2dkh_A 244 ---VR-Y-KVAIQSEQGNVLIIPRE--GGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPY--KLEVKNVPWW 314 (639)
T ss_dssp ---TT-S-EEEEEETTEEEEEEECT--TSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTS--CEEEEEEEEE
T ss_pred ---cc-e-eEEEEcCCceEEEEEcC--CCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcc--cCcceeeeEE
Confidence 01 1 11222244333334433 23 3333322211 11 1223467788888888877642 23333333
Q ss_pred -Cccccceeccccc----------ccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHH
Q 008258 343 -PWVMHAEVAEKFL----------CCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYET 411 (572)
Q Consensus 343 -~w~~~~~~a~~~~----------~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~ 411 (572)
.|.+..+++++|. ...|||+|+|||||.|+|++|||||+||+||+||+|||+.+++|.+.+.+|++|++
T Consensus 315 ~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~ 394 (639)
T 2dkh_A 315 SVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSS 394 (639)
T ss_dssp EEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHH
T ss_pred EecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 3445667888886 01599999999999999999999999999999999999999999888999999999
Q ss_pred hhhHHHHHhHHHHHH
Q 008258 412 ERKPIAEFNTALSVQ 426 (572)
Q Consensus 412 eR~~~a~~~~~~s~~ 426 (572)
||+|+++.+++.+..
T Consensus 395 eR~~~a~~~~~~s~~ 409 (639)
T 2dkh_A 395 ERQVVAQQLIDFDRE 409 (639)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988876643
No 7
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=7.5e-43 Score=383.06 Aligned_cols=343 Identities=24% Similarity=0.290 Sum_probs=245.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
.+++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+.+ |+++++...+.+.... .
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~l-Gl~~~l~~~~~~~~~~---~- 121 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLR-GLLDRFLEGTQVAKGL---P- 121 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTT-TCHHHHTTSCCBCSBC---C-
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHc-CChHHHHhcCcccCCc---e-
Confidence 3568999999999999999999999999999999999888899999999999999999 9999998766443210 0
Q ss_pred eeCCCCCeeeeecCCCccccccccCCc-cccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPV-SVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~-~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
..+.....+ ++.....+. ..+.++|..|++.|.+.+.+.|+ +|+++++|++
T Consensus 122 ---~~~~~~~~~------~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~~~v~~ 173 (570)
T 3fmw_A 122 ---FAGIFTQGL------DFGLVDTRHPYTGLVPQSRTEALLAEHAREAGA-------------------EIPRGHEVTR 173 (570)
T ss_dssp ---BTTBCTTCC------BGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTE-------------------ECCBSCEEEE
T ss_pred ---eCCcccccc------cccccCCCCCeeEEeCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 011100001 011111111 23568999999999999988886 8899999999
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEE
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (572)
+++++++|++++... +| +.+++||+||+|||++|.||+.+|+.+.+....+.++...+...... ....
T Consensus 174 l~~~~~~v~v~~~~~-~G---~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~--------~~~~ 241 (570)
T 3fmw_A 174 LRQDAEAVEVTVAGP-SG---PYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE--------VPRR 241 (570)
T ss_dssp CCBCSSCEEEEEEET-TE---EEEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS--------SCCC
T ss_pred EEEcCCeEEEEEEeC-CC---cEEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC--------cceE
Confidence 999999999888532 33 14799999999999999999999999888776655554443222110 0011
Q ss_pred EEEecCceEEEEEecCCCC---eEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCCCCceeEE-EecCccccceeccccc
Q 008258 280 FIFNTEAIGVLVAHDLKEG---EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVI-DIKPWVMHAEVAEKFL 355 (572)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~-~~~~w~~~~~~a~~~~ 355 (572)
+.+.+....++ ..+...+ .+++..+-.+........+.+.+.+.+++.++......+.. ....|++..+.+++|.
T Consensus 242 ~~~~~~G~~~~-~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 320 (570)
T 3fmw_A 242 WERTPDGILVL-AFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYR 320 (570)
T ss_dssp CCCCCSSCEEE-CCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEECCCCEECSCSE
T ss_pred EEecCCEEEEE-EeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccccceeeeeeEEeecccccccccc
Confidence 11223322222 0122223 34444332121223345677777777777766544333333 4456777888899997
Q ss_pred ccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHHHh
Q 008258 356 CCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAA 431 (572)
Q Consensus 356 ~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~~~ 431 (572)
.|||+|+|||||.++|++|||+|+||+||.+|+|+|+.++++.+.+.+|++|+++|++++..++..+....+.+
T Consensus 321 --~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~ 394 (570)
T 3fmw_A 321 --SGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALM 394 (570)
T ss_dssp --ETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred --cCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 59999999999999999999999999999999999999999888899999999999999999988887655433
No 8
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=2.8e-42 Score=364.17 Aligned_cols=353 Identities=23% Similarity=0.238 Sum_probs=211.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC--CeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~--~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
++|+||||||+||++|+.|+++|++|+||||++.+...+ .++.++++++++|+++ |+.+.+................
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~l-g~~~~~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQEC-LPAENWLAFEEASRYIGGQSRF 80 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHH-SCHHHHHHHHHHCEEECCCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHc-CChHHHHHhhhhhcccCcceeE
Confidence 479999999999999999999999999999998886654 4677899999999999 8887764321111000000011
Q ss_pred eCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
.+..+..+........ ............+.|..|+++|.+.+. ..|++++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~R~~L~~~L~~~~~----------------------~~v~~~~~v~~~~ 136 (412)
T 4hb9_A 81 YNERMRLLAVHGGISP--MAGKIISEQRLSISRTELKEILNKGLA----------------------NTIQWNKTFVRYE 136 (412)
T ss_dssp ECTTSCEEEC----------------CEEEEEHHHHHHHHHTTCT----------------------TTEECSCCEEEEE
T ss_pred ecCCcceecccCCccc--cccccccccceEeeHHHHHHHHHhhcc----------------------ceEEEEEEEEeee
Confidence 1122222211111100 000011223356788888888876441 2789999999999
Q ss_pred eeCC-eEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEec-Cccc----ccc-----
Q 008258 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLG----DYL----- 270 (572)
Q Consensus 202 ~~~~-~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~-~~l~----~~~----- 270 (572)
+.++ +|++++. +|+ +++||+||||||++|.||++++............+...... .... ...
T Consensus 137 ~~~~~~v~v~~~---dG~----~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (412)
T 4hb9_A 137 HIENGGIKIFFA---DGS----HENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTP 209 (412)
T ss_dssp ECTTSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCC
T ss_pred EcCCCeEEEEEC---CCC----EEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCc
Confidence 8655 5777664 665 68999999999999999999976554432222222111111 0000 000
Q ss_pred ---ccCCCceEEE--EEecCceEEEEEecCCCCeEEEEe---ecCCCCCCCCCCCHHHHHHHHHHHh-CCCCCceeEE--
Q 008258 271 ---LNERPGMLFF--IFNTEAIGVLVAHDLKEGEFILQV---PFYPPQQNLEDFSPEICEKLIFKLV-GWELSDIDVI-- 339 (572)
Q Consensus 271 ---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~i~-- 339 (572)
....+...++ +..|....+... ......+..++ ..........+++.+.+.+.+++.+ ++.+.-.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~ 288 (412)
T 4hb9_A 210 NSIVPKSPDWLFISMWRAPVNIHVEAS-LAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQ 288 (412)
T ss_dssp EEECCSSSEEEEEEEEEEESCTTSCGG-GCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHT
T ss_pred ceEeecCCCcceeeeeecCCceeEEEe-ccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHh
Confidence 0111111111 111110000000 00112222221 1111122334566666666666544 2221100000
Q ss_pred ----EecCcccc-ceecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCc-hhhHhhHHHhh
Q 008258 340 ----DIKPWVMH-AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAP-ASILNTYETER 413 (572)
Q Consensus 340 ----~~~~w~~~-~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~-~~~L~~Y~~eR 413 (572)
...+|... .....+|. +|||+|+|||||.|+|++|||||+||+||++|+|+|+.+.++... +.+|++|+++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R 366 (412)
T 4hb9_A 289 SDMENISPLHLRSMPHLLPWK--SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQM 366 (412)
T ss_dssp SCTTCCEEEEEEECCCCCCCC--CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred cccceeccchhcccccccccc--ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHH
Confidence 11122221 12345565 699999999999999999999999999999999999999877654 88999999999
Q ss_pred hHHHHHhHHHHHHHHHHh
Q 008258 414 KPIAEFNTALSVQNFRAA 431 (572)
Q Consensus 414 ~~~a~~~~~~s~~~~~~~ 431 (572)
+|+++.+++.|.++.+..
T Consensus 367 ~~~~~~~~~~s~~~~~~~ 384 (412)
T 4hb9_A 367 RAYANEIVGISLRSAQNA 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998876543
No 9
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.6e-38 Score=334.40 Aligned_cols=340 Identities=16% Similarity=0.163 Sum_probs=222.2
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 40 ~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
++.++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+.+ |+++++...+.+...+ .
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~l-g~~~~~~~~~~~~~~~---~ 95 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHL-GMGDIMETFGGPLRRM---A 95 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHT-TCHHHHHHHSCCCCEE---E
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHC-CCHHHHHhhcCCCcce---E
Confidence 35568999999999999999999999999999999998888889999999999999999 9999998877665332 2
Q ss_pred eeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
+.....|+.+...+... +.. ..+...+.++|..|++.|.+.+.+ + +|+++++|++
T Consensus 96 ~~~~~~g~~~~~~~~~~---~~~-~~~~~~~~i~r~~l~~~L~~~~~~--~-------------------~i~~~~~v~~ 150 (407)
T 3rp8_A 96 YRDFRSGENMTQFSLAP---LIE-RTGSRPCPVSRAELQREMLDYWGR--D-------------------SVQFGKRVTR 150 (407)
T ss_dssp EEETTTCCEEEEEECHH---HHH-HHSSCCEEEEHHHHHHHHHHHHCG--G-------------------GEEESCCEEE
T ss_pred EEECCCCCEeEEecchh---hhh-hcCCceEEEEHHHHHHHHHHhCCc--C-------------------EEEECCEEEE
Confidence 22223366555443210 000 012234678999999999998865 3 8899999999
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhc-CCccccccCcceEEEEEEecCccccccccCCCceE
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV-GIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~l-g~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 278 (572)
++++++++++++. +|+ +++||+||+|||.+|.||+.+ +............+...+.... ........
T Consensus 151 i~~~~~~v~v~~~---~g~----~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 218 (407)
T 3rp8_A 151 CEEDADGVTVWFT---DGS----SASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDE-----ALAPGDQW 218 (407)
T ss_dssp EEEETTEEEEEET---TSC----EEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCT-----TTCCTTEE
T ss_pred EEecCCcEEEEEc---CCC----EEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEeccc-----ccCCCCce
Confidence 9999999887765 554 689999999999999999998 6542211110111111111110 01122333
Q ss_pred EEEEecCceEEEEEecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhC-CCC---------CceeEEEecCccccc
Q 008258 279 FFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVG-WEL---------SDIDVIDIKPWVMHA 348 (572)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~---------~~~~i~~~~~w~~~~ 348 (572)
..++.++...++++.. .+.+.+.+....+... ..+++...+.+.+.+. +.+ ..........+++.
T Consensus 219 ~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (407)
T 3rp8_A 219 TTFVGEGKQVSLMPVS--AGRFYFFFDVPLPAGL--AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIE- 293 (407)
T ss_dssp EEEEETTEEEEEEEET--TTEEEEEEEEECCTTC--SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECC-
T ss_pred EEEECCCcEEEEEEcC--CCeEEEEEEeCCCcCC--CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecC-
Confidence 3444565544444443 3554444333222211 1111222233333222 111 00011000111111
Q ss_pred eecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHH
Q 008258 349 EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNF 428 (572)
Q Consensus 349 ~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~ 428 (572)
..++|. .+||+|+|||||.++|++|||+|+||+||.+|+|+|+.. + ..+.+|+.|+++|++++..++..+....
T Consensus 294 -~~~~~~--~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~--~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 367 (407)
T 3rp8_A 294 -PFSRLV--RGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT--R-DIAAALREYEAQRCDRVRDLVLKARKRC 367 (407)
T ss_dssp -CCSCCE--ETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcee--cCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 126675 599999999999999999999999999999999999852 3 6788999999999999999999888776
Q ss_pred HHh
Q 008258 429 RAA 431 (572)
Q Consensus 429 ~~~ 431 (572)
+..
T Consensus 368 ~~~ 370 (407)
T 3rp8_A 368 DIT 370 (407)
T ss_dssp HHH
T ss_pred hhh
Confidence 554
No 10
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=5.7e-37 Score=324.51 Aligned_cols=343 Identities=20% Similarity=0.200 Sum_probs=218.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~-v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
.++||+||||||+||++|+.|+++|++ |+||||.+.+...+++..++++++++|+.+ |+.+.+...+.+...+ .+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~l-g~~~~l~~~~~~~~~~---~~ 78 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAEL-GLGPALAATAIPTHEL---RY 78 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHT-TCHHHHHHHSEEECEE---EE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHC-CChHHHHhhCCCcceE---EE
Confidence 458999999999999999999999999 999999988877888999999999999999 9999998776554321 22
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHh-cCceeeccCCcccccccccccceEEeccEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
.+..|..+......... ........++|..|++.|.+.+.+ .|. ++++++++|++
T Consensus 79 -~~~~g~~~~~~~~~~~~-----~~~~~~~~i~r~~l~~~L~~~~~~~~g~------------------~~v~~~~~v~~ 134 (410)
T 3c96_A 79 -IDQSGATVWSEPRGVEA-----GNAYPQYSIHRGELQMILLAAVRERLGQ------------------QAVRTGLGVER 134 (410)
T ss_dssp -ECTTSCEEEEEECGGGG-----TCSSCEEEEEHHHHHHHHHHHHHHHHCT------------------TSEEESEEEEE
T ss_pred -EcCCCCEEeeccCCccc-----cCCCCeeeeeHHHHHHHHHHHHHhhCCC------------------cEEEECCEEEE
Confidence 23345544332110000 012223568899999999999876 352 37999999999
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEE
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (572)
+++ ++++++++...++|+ +.+++||+||+|||++|.||+.++..... ..+.+...+..... .. ...++..+
T Consensus 135 i~~-~~~v~v~~~~~~~g~--~~~~~ad~vV~AdG~~S~vR~~l~~~~~~-~~~~g~~~~~~~~~-~~----~~~~~~~~ 205 (410)
T 3c96_A 135 IEE-RDGRVLIGARDGHGK--PQALGADVLVGADGIHSAVRAHLHPDQRP-LSHGGITMWRGVTE-FD----RFLDGKTM 205 (410)
T ss_dssp EEE-ETTEEEEEEEETTSC--EEEEEESEEEECCCTTCHHHHHHCTTCCC-CEEEEEEEEEEEEE-ES----CCTTSSEE
T ss_pred Eec-CCccEEEEecCCCCC--ceEEecCEEEECCCccchhHHHhcCCCCC-CCcCCeeEEEeecc-cc----cccCCCeE
Confidence 998 778888876322342 34789999999999999999998643211 11211111111110 00 01122223
Q ss_pred EEEec--CceEEEEEecC-----CCCeEEEEeecCCC----CCCCCC----CCHHHHHHHHHHHhCCCCCce---eE---
Q 008258 280 FIFNT--EAIGVLVAHDL-----KEGEFILQVPFYPP----QQNLED----FSPEICEKLIFKLVGWELSDI---DV--- 338 (572)
Q Consensus 280 ~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~l~~~~~~~~~~~---~i--- 338 (572)
+++.+ ....++.+... ....+.+.+....+ ...... .+.+. ++..+.++..... ++
T Consensus 206 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~i~~ 282 (410)
T 3c96_A 206 IVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLED---VLPFFADWDLGWFDIRDLLTR 282 (410)
T ss_dssp EEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHH---HHHHHTTCCBTTBCHHHHHHT
T ss_pred EEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHH---HHHHhcCCCCchhHHHHHHhc
Confidence 33332 22333333221 11222232221100 001111 22333 3333323221100 00
Q ss_pred -EEecCccccc-eecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHH
Q 008258 339 -IDIKPWVMHA-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPI 416 (572)
Q Consensus 339 -~~~~~w~~~~-~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~ 416 (572)
.....|++.. ...++|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+.. .+.+.+|++|+++|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~--~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~~Ye~~r~~~ 357 (410)
T 3c96_A 283 NQLILQYPMVDRDPLPHWG--RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALREYEEARRPT 357 (410)
T ss_dssp CSEEEEEEEEECCCCSCCC--BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHH
T ss_pred CcccceeecccCCCccccc--cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHH
Confidence 0112333322 2356776 599999999999999999999999999999999999863 35688999999999999
Q ss_pred HHHhHHHHHHHHH
Q 008258 417 AEFNTALSVQNFR 429 (572)
Q Consensus 417 a~~~~~~s~~~~~ 429 (572)
+..++..+.+.+.
T Consensus 358 ~~~~~~~s~~~~~ 370 (410)
T 3c96_A 358 ANKIILANREREK 370 (410)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHH
Confidence 9998888875543
No 11
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.4e-38 Score=331.74 Aligned_cols=341 Identities=20% Similarity=0.221 Sum_probs=230.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+.+ |+.+++...+.+...+. +
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~~~---~ 79 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAA-GLLAEVTRRGGRVRHEL---E 79 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHT-TCHHHHHHTTCEEECEE---E
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHc-CcHHHHHHhCCCcceeE---E
Confidence 3458999999999999999999999999999999988877889999999999999999 99999887665543221 1
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhc-CceeeccCCcccccccccccceEEeccEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
.+..|.....++.... ..+.....++|..|.+.|.+.+.+. |+ +++++++|++
T Consensus 80 -~~~~g~~~~~~~~~~~------~~~~~~~~~~r~~l~~~L~~~~~~~~gv-------------------~i~~~~~v~~ 133 (399)
T 2x3n_A 80 -VYHDGELLRYFNYSSV------DARGYFILMPCESLRRLVLEKIDGEATV-------------------EMLFETRIEA 133 (399)
T ss_dssp -EEETTEEEEEEETTSS------CGGGCEEECCHHHHHHHHHHHHTTCTTE-------------------EEECSCCEEE
T ss_pred -EeCCCCEEEecchHHh------cccCccccccHHHHHHHHHHHhhhcCCc-------------------EEEcCCEEEE
Confidence 1223443333321110 0112235689999999999999887 65 8999999999
Q ss_pred EeeeCCeE--EEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccc--cCcceEEEEEEecCccccccccCCC
Q 008258 200 VSATDQCI--NVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGE--KDLQKLVSVHFLSKDLGDYLLNERP 275 (572)
Q Consensus 200 v~~~~~~v--~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~--~~~~~~~~~~~~~~~l~~~~~~~~~ 275 (572)
++++++++ ++++. +|+ ++++|+||+|||.+|.||+.+++...+. ...+.+..+..... .. . + ..
T Consensus 134 i~~~~~~v~g~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~-~~-~--~-~~ 201 (399)
T 2x3n_A 134 VQRDERHAIDQVRLN---DGR----VLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAP-CV-A--E-RN 201 (399)
T ss_dssp EEECTTSCEEEEEET---TSC----EEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCH-HH-H--H-CE
T ss_pred EEEcCCceEEEEEEC---CCC----EEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEec-CC-C--C-Cc
Confidence 99988887 66654 553 6899999999999999999998765543 22220121111111 00 0 1 11
Q ss_pred ceEEEEEec-CceEEEEEecCCCCeEEEEeecCCCC-CCC-CCCCHHHHHHHHHHHhCCCC--CceeEE---EecCcccc
Q 008258 276 GMLFFIFNT-EAIGVLVAHDLKEGEFILQVPFYPPQ-QNL-EDFSPEICEKLIFKLVGWEL--SDIDVI---DIKPWVMH 347 (572)
Q Consensus 276 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~--~~~~i~---~~~~w~~~ 347 (572)
. .++.| +...++++.+. +.+.+.+.+.+.. ... ...+.+.+.+.++.+ +... ..++.. ....|++.
T Consensus 202 --~-~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 275 (399)
T 2x3n_A 202 --R-LYVDSQGGLAYFYPIGF--DRARLVVSFPREEARELMADTRGESLRRRLQRF-VGDESAEAIAAVTGTSRFKGIPI 275 (399)
T ss_dssp --E-EEECTTSCEEEEEEETT--TEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTT-CCGGGHHHHHTCCCSTTCEECCC
T ss_pred --c-EEEcCCCcEEEEEEcCC--CEEEEEEEeCccccccccccCCHHHHHHHHhhc-CCcchhhHHhcCCccceEEechh
Confidence 2 44556 55444444432 5565555221110 000 012334444454422 2211 111111 12345555
Q ss_pred c-eecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhc-CCCchhhHhhHHHhhhHHHHHhHHHHH
Q 008258 348 A-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSV 425 (572)
Q Consensus 348 ~-~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~-g~~~~~~L~~Y~~eR~~~a~~~~~~s~ 425 (572)
. ...++|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+..++ +.+.+.+|++|+++|++++..++..+.
T Consensus 276 ~~~~~~~~~--~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~ 353 (399)
T 2x3n_A 276 GYLNLDRYW--ADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGH 353 (399)
T ss_dssp CCEECSCSE--ETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccc--cCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccHHHHHHHHHH
Confidence 5 6677786 59999999999999999999999999999999999999875 445688999999999999999888887
Q ss_pred HHHHHh
Q 008258 426 QNFRAA 431 (572)
Q Consensus 426 ~~~~~~ 431 (572)
...+..
T Consensus 354 ~~~~~~ 359 (399)
T 2x3n_A 354 ALATSL 359 (399)
T ss_dssp HHHHHT
T ss_pred Hhhhhh
Confidence 665443
No 12
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=1.9e-37 Score=326.18 Aligned_cols=338 Identities=18% Similarity=0.249 Sum_probs=219.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC--CCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF--STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~--~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
++||+||||||+||++|+.|++.|++|+||||.+.+ ....++..++++++++|+.+ |+++++.+.+.+...+ .+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~l-g~~~~~~~~~~~~~~~---~~ 77 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREA-GVDRRMARDGLVHEGV---EI 77 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHT-TCCHHHHHHCEEESCE---EE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHc-CCcHHHHhcCCccceE---EE
Confidence 479999999999999999999999999999998753 23456667999999999999 9999988765544322 11
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.. .+.. ...+ +.....+.....++|..+.+.|++.+.+.|+ +++++++|+++
T Consensus 78 ~~--~~~~-~~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-------------------~i~~~~~v~~i 129 (394)
T 1k0i_A 78 AF--AGQR-RRID------LKRLSGGKTVTVYGQTEVTRDLMEAREACGA-------------------TTVYQAAEVRL 129 (394)
T ss_dssp EE--TTEE-EEEC------HHHHHTSCCEEECCHHHHHHHHHHHHHHTTC-------------------EEESSCEEEEE
T ss_pred EE--CCce-EEec------cccccCCCceEEechHHHHHHHHHHHHhcCC-------------------eEEeceeEEEE
Confidence 11 1211 1111 1100012224567888999999999988776 89999999999
Q ss_pred eeeC-CeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEe--cCccccccccCCCce
Q 008258 201 SATD-QCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFL--SKDLGDYLLNERPGM 277 (572)
Q Consensus 201 ~~~~-~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~--~~~l~~~~~~~~~~~ 277 (572)
++++ +++.|++. ++|+ +.+++||+||+|||.+|.||+.++..... .+.......+. ..+.. ...+..
T Consensus 130 ~~~~~~~~~v~~~--~~g~--~~~~~a~~vV~AdG~~S~vr~~l~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~ 199 (394)
T 1k0i_A 130 HDLQGERPYVTFE--RDGE--RLRLDCDYIAGCDGFHGISRQSIPAERLK--VFERVYPFGWLGLLADTP----PVSHEL 199 (394)
T ss_dssp ECTTSSSCEEEEE--ETTE--EEEEECSEEEECCCTTCSTGGGSCGGGCE--EEEEEEEEEEEEEEESSC----CSCSSC
T ss_pred EEecCCceEEEEe--cCCc--EEEEEeCEEEECCCCCcHHHHhcCccccc--cccccccceeEEEecCCC----CCccce
Confidence 8864 56777773 2553 34689999999999999999999754211 11111111110 00100 111222
Q ss_pred EEEEEecCceEEEEEecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCC----CCCceeEEEecCccccceeccc
Q 008258 278 LFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGW----ELSDIDVIDIKPWVMHAEVAEK 353 (572)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~i~~~~~w~~~~~~a~~ 353 (572)
.+...+....++...+.....|.+..+ +. .....++++...+.+.+.++. ............|++....+++
T Consensus 200 -~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (394)
T 1k0i_A 200 -IYANHPRGFALCSQRSATRSQYYVQVP--LS-EKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEP 275 (394)
T ss_dssp -EEECCTTCCEEEEEEETTEEEEEEEEC--TT-CCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEEC
T ss_pred -EEEEcCCceEEEEecCCCcEEEEEEeC--CC-CCccccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhccc
Confidence 222234444433333222122333332 22 223345665555555444322 1111122222334455556677
Q ss_pred ccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHH
Q 008258 354 FLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (572)
Q Consensus 354 ~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~ 429 (572)
|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+..+++. .+.+|++|+++|++++..++..+.....
T Consensus 276 ~~--~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~-~~~~L~~Y~~~r~~~~~~~~~~s~~~~~ 348 (394)
T 1k0i_A 276 MQ--HGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG-RGELLERYSAICLRRIWKAERFSWWMTS 348 (394)
T ss_dssp SE--ETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC-CGGGGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--cCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 5999999999999999999999999999999999999876543 4689999999999999988887765443
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=1.6e-37 Score=327.21 Aligned_cols=335 Identities=16% Similarity=0.156 Sum_probs=213.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF-STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~-~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
+.++||+||||||+||++|+.|+++|++|+||||.+.+ ...+++..++++++++|+.+ |+.+ ...+.+... ..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~-g~~~--~~~~~~~~~---~~ 76 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQ-GVEL--DSISVPSSS---ME 76 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHT-TCCG--GGTCBCCCE---EE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHc-CCcc--ccccccccc---eE
Confidence 44689999999999999999999999999999998875 44567888999999999999 8876 333333321 22
Q ss_pred eeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
+.....|..+..... + ...+++..|.+.|.+.+ .| ++++++++|++
T Consensus 77 ~~~~~~g~~~~~~~~-----------~--~~~~~~~~l~~~L~~~~--~~-------------------~~i~~~~~v~~ 122 (397)
T 2vou_A 77 YVDALTGERVGSVPA-----------D--WRFTSYDSIYGGLYELF--GP-------------------ERYHTSKCLVG 122 (397)
T ss_dssp EEETTTCCEEEEEEC-----------C--CCEEEHHHHHHHHHHHH--CS-------------------TTEETTCCEEE
T ss_pred EEecCCCCccccccC-----------c--ccccCHHHHHHHHHHhC--CC-------------------cEEEcCCEEEE
Confidence 222224554432211 1 12345678888887765 23 38999999999
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEec--CccccccccCCCce
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS--KDLGDYLLNERPGM 277 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~--~~l~~~~~~~~~~~ 277 (572)
++++++++++++. +|+ ++++|+||+|||.+|.||+.++ +.. ..+.....+.... .++...........
T Consensus 123 i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vr~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (397)
T 2vou_A 123 LSQDSETVQMRFS---DGT----KAEANWVIGADGGASVVRKRLL-GIE--PTYAGYVTWRGVLQPGEVADDVWNYFNDK 192 (397)
T ss_dssp EEECSSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHH-CCC--CEEEEEEEEEEEECTTSSCHHHHHHHTTE
T ss_pred EEecCCEEEEEEC---CCC----EEECCEEEECCCcchhHHHHhc-cCC--CCccceEEEEEEeeccccChhhhhhhcCc
Confidence 9999888887764 553 6899999999999999999998 542 2222222111111 11110000000012
Q ss_pred EEEEEecCceEEEEEecCCCC------eEEEEeecCCCC--C----CC-----------CCCCHHHHHHHHHHHh-CCCC
Q 008258 278 LFFIFNTEAIGVLVAHDLKEG------EFILQVPFYPPQ--Q----NL-----------EDFSPEICEKLIFKLV-GWEL 333 (572)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~----~~-----------~~~~~~~~~~~l~~~~-~~~~ 333 (572)
..++..++....+.+.+...+ .|++..+..... . .. ...+++.+.++++.+. .+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (397)
T 2vou_A 193 FTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP 272 (397)
T ss_dssp EEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH
T ss_pred eeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH
Confidence 233334543333333332212 244444321100 0 00 0013444444443332 1211
Q ss_pred CceeEE----EecCccccceecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhH
Q 008258 334 SDIDVI----DIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTY 409 (572)
Q Consensus 334 ~~~~i~----~~~~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y 409 (572)
-.+++ ....|++....+++|. .|||+|+|||||.++|++|||+|+||+||.+|+++|.. +.+.+.+|++|
T Consensus 273 -~~~~~~~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~~~~~~L~~Y 346 (397)
T 2vou_A 273 -FRDLVLNASSPFVTVVADATVDRMV--HGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NHDLRGSLQSW 346 (397)
T ss_dssp -HHHHHHHCSSCEEEEEEEBCCSCSE--ETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CSCHHHHHHHH
T ss_pred -HHHHHhccCCcceeeeeeecCCcee--cCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CCCHHHHHHHH
Confidence 00100 0112444444567786 59999999999999999999999999999999999974 34567899999
Q ss_pred HHhhhHHHHHhHHHHHHHHHHh
Q 008258 410 ETERKPIAEFNTALSVQNFRAA 431 (572)
Q Consensus 410 ~~eR~~~a~~~~~~s~~~~~~~ 431 (572)
+++|++++..++..|....+..
T Consensus 347 e~~R~~~~~~~~~~s~~~~~~~ 368 (397)
T 2vou_A 347 ETRQLQQGHAYLNKVKKMASRL 368 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888776655
No 14
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=3.1e-36 Score=317.55 Aligned_cols=342 Identities=18% Similarity=0.236 Sum_probs=212.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC--CCeeeeCh-hHHHHHHhhcchHHHHHhcCCCcccccc
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH--PQAHFINN-RYALVFRKLDGLAEEIERSQPPVDLWRK 117 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~--~~a~~l~~-rt~e~l~~l~Gl~~~l~~~~~~~~~~~~ 117 (572)
+.++||+||||||+||++|+.|+++|++|+||||.+.+... +.+..+++ +++++|+++ |+++++...+.+...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~--- 99 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKA-GLLQTYYDLALPMGV--- 99 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHT-TCHHHHHHHCBCCCE---
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhc-ChHHHHHHhhcccce---
Confidence 34589999999999999999999999999999999876443 33444554 579999999 999999876654432
Q ss_pred eeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEE
Q 008258 118 FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (572)
Q Consensus 118 ~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v 197 (572)
.+ .+..|..+.... .+. ........++|..|++.|.+.+.+ .+|+++++|
T Consensus 100 -~~-~~~~g~~~~~~~--~~~-----~~~~~~~~i~r~~l~~~L~~~~~~---------------------~~i~~~~~v 149 (398)
T 2xdo_A 100 -NI-ADEKGNILSTKN--VKP-----ENRFDNPEINRNDLRAILLNSLEN---------------------DTVIWDRKL 149 (398)
T ss_dssp -EE-ECSSSEEEEECC--CGG-----GTTSSCCEECHHHHHHHHHHTSCT---------------------TSEEESCCE
T ss_pred -EE-ECCCCCchhhcc--ccc-----cCCCCCceECHHHHHHHHHhhcCC---------------------CEEEECCEE
Confidence 11 123454443220 000 001112357889999988876532 278999999
Q ss_pred EEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCc--c--ccccccC
Q 008258 198 VSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKD--L--GDYLLNE 273 (572)
Q Consensus 198 ~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~--l--~~~~~~~ 273 (572)
++++++++++++++. +|+ +++||+||+|||.+|.||+.++... ..+.....+...... . ..+....
T Consensus 150 ~~i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vR~~l~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~ 219 (398)
T 2xdo_A 150 VMLEPGKKKWTLTFE---NKP----SETADLVILANGGMSKVRKFVTDTE---VEETGTFNIQADIHQPEINCPGFFQLC 219 (398)
T ss_dssp EEEEECSSSEEEEET---TSC----CEEESEEEECSCTTCSCCTTTCCCC---CEEEEEEEEEEEESSHHHHSHHHHHHH
T ss_pred EEEEECCCEEEEEEC---CCc----EEecCEEEECCCcchhHHhhccCCC---ceEcceEEEEEEeCchhccCchhHhhc
Confidence 999998888877764 553 5899999999999999999986321 111111111111111 0 0000000
Q ss_pred CCceEEEEEecCceEEEEEecCCCCeEEEEeecCCCCCCC-----CCCCHHHHHHHHHHHhC-CCCCceeEE----EecC
Q 008258 274 RPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNL-----EDFSPEICEKLIFKLVG-WELSDIDVI----DIKP 343 (572)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~-~~~~~~~i~----~~~~ 343 (572)
..+. .+++.|....+..+. ..+.+.+.+.+..+.... ...+++...+.+.+.+. +.+.-.+++ ....
T Consensus 220 ~~g~-~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 296 (398)
T 2xdo_A 220 NGNR-LMASHQGNLLFANPN--NNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVG 296 (398)
T ss_dssp TTSE-EEEEETTEEEEEEEE--ETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEE
T ss_pred CCce-EEEecCCCeEEEEeC--CCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCccccee
Confidence 1222 334455533322222 234444443322222111 11244444444444332 211000000 0111
Q ss_pred ccccc-eecccccccCC--cEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCC-chhhHhhHHHhhhHHHHH
Q 008258 344 WVMHA-EVAEKFLCCYN--QIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEF 419 (572)
Q Consensus 344 w~~~~-~~a~~~~~~~g--rV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~-~~~~L~~Y~~eR~~~a~~ 419 (572)
|.+.. ....+|.. .+ ||+|+|||||.++|++|||+|+||+||.+|+|+|+.. +.+ .+.+|++|+++|++++..
T Consensus 297 ~~~~~~~~~~~~~~-~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~r~~~~~~ 373 (398)
T 2xdo_A 297 LATRIFPLEKPWKS-KRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--KFNSIEEAVKNYEQQMFIYGKE 373 (398)
T ss_dssp EEEEECCCCSCCCS-CCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC--CSSSHHHHHHHHHHHHHHHHHH
T ss_pred eeeEeccCCCCccc-CCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc--cCchHHHHHHHHHHHHHHHHHH
Confidence 22211 12235642 35 9999999999999999999999999999999999864 223 578999999999999999
Q ss_pred hHHHHHHHHHHhc
Q 008258 420 NTALSVQNFRAAM 432 (572)
Q Consensus 420 ~~~~s~~~~~~~~ 432 (572)
++..+.++....+
T Consensus 374 ~~~~s~~~~~~~~ 386 (398)
T 2xdo_A 374 AQEESTQNEIEMF 386 (398)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9998888776554
No 15
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.6e-34 Score=301.23 Aligned_cols=327 Identities=13% Similarity=0.095 Sum_probs=197.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS-THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~-~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
.++||+||||||+||++|+.|+++|++|+||||++.+. +..++..|++++++ .+ |+.........+ ......
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~---~l-~~~~~~~~~~~~---~~~~~~ 75 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILN---EA-DIKADRSFIANE---VKGARI 75 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHH---HT-TCCCCTTTEEEE---ESEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHH---Hc-CCCchhhhhhcc---cceEEE
Confidence 46999999999999999999999999999999988763 34457778776554 44 442211110000 111111
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.+..+......... ...+...+.++|..|++.|.+.+.+.|+ +++++++++++
T Consensus 76 -~~~~~~~~~~~~~~-------~~~~~~~~~i~R~~~~~~L~~~a~~~G~-------------------~~~~~~~v~~~ 128 (397)
T 3oz2_A 76 -YGPSEKRPIILQSE-------KAGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALGV 128 (397)
T ss_dssp -ECTTCSSCEEEECS-------SSSCCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEEE
T ss_pred -EeCCCceEeecccc-------ccCCceeEEEEHHHHHHHHHHHHHhcCc-------------------EEeeeeeeeee
Confidence 11222211111100 0112223578999999999999999887 89999999999
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEEE
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 280 (572)
..+++.++..... .++ +..+++||+||||||++|.||+.+|+...............+.... ....+....+
T Consensus 129 ~~~~~~~~~v~~~-~~~--~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 200 (397)
T 3oz2_A 129 IKENGKVAGAKIR-HNN--EIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMIN-----VDVDPDYTDF 200 (397)
T ss_dssp EEETTEEEEEEEE-ETT--EEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEES-----CCCCTTEEEE
T ss_pred eeccceeeeeeec-ccc--cceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeec-----cccCccccee
Confidence 9888877654432 233 4557999999999999999999998765544333333333222111 0112222222
Q ss_pred EEe---cCceEEEEEecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCCC--CceeEEEe-cCccccceecccc
Q 008258 281 IFN---TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL--SDIDVIDI-KPWVMHAEVAEKF 354 (572)
Q Consensus 281 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~i~~~-~~w~~~~~~a~~~ 354 (572)
++. |....++.+.. .+.+.+.+...... ........+.+.+++...+ ...+.... ..+.........+
T Consensus 201 ~~~~~~~~g~~~~~~~~--~~~~~vg~~~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 274 (397)
T 3oz2_A 201 YLGSIAPAGYIWVFPKG--EGMANVGIGSSINW----IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPI 274 (397)
T ss_dssp ECSTTSTTEEEEEEEEE--TTEEEEEEEEETTT----SCSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCC
T ss_pred eeeccCCCceEEEeecc--cceeEEEEeeccch----hhhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccce
Confidence 221 22233333332 23333333221111 1122333344444332211 01111111 1111112223344
Q ss_pred cccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhc-CCCchhhHhhHHHhhhHHHH
Q 008258 355 LCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAE 418 (572)
Q Consensus 355 ~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~-g~~~~~~L~~Y~~eR~~~a~ 418 (572)
. .+||+|+|||||.++|++|||+|+||+||..||+.|+..++ ++..+.+|+.|+++++++..
T Consensus 275 ~--~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~ 337 (397)
T 3oz2_A 275 T--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFE 337 (397)
T ss_dssp E--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHH
T ss_pred e--eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 3 58999999999999999999999999999999999998774 56678899999999887653
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=2.9e-34 Score=300.53 Aligned_cols=322 Identities=16% Similarity=0.198 Sum_probs=210.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
..+||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+.+ |+.+++...+.+...+ .+.
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~~---~~~ 85 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGL-GALDDVLQGSHTPPTY---ETW 85 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHT-TCHHHHHTTCBCCSCE---EEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHc-CCHHHHHhhCCCccce---EEE
Confidence 357999999999999999999999999999999988877789999999999999999 9999998776554322 222
Q ss_pred eCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
.. |..+...+.. ......++|..|++.|.+.+.+.|+ +++++++|++++
T Consensus 86 ~~--g~~~~~~~~~----------~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~i~ 134 (379)
T 3alj_A 86 MH--NKSVSKETFN----------GLPWRIMTRSHLHDALVNRARALGV-------------------DISVNSEAVAAD 134 (379)
T ss_dssp ET--TEEEEEECGG----------GCCEEEEEHHHHHHHHHHHHHHTTC-------------------EEESSCCEEEEE
T ss_pred eC--CceeeeccCC----------CCceEEECHHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEE
Confidence 22 5544332210 1124678999999999999988876 899999999998
Q ss_pred eeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccc-cccCCCc-eEE
Q 008258 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDY-LLNERPG-MLF 279 (572)
Q Consensus 202 ~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~ 279 (572)
+ ++ +|++. +|+ +++||+||+|||.+|.+|+.++..... .+.....+...... ... .....+. ...
T Consensus 135 ~--~~-~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~l~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 201 (379)
T 3alj_A 135 P--VG-RLTLQ---TGE----VLEADLIVGADGVGSKVRDSIGFKQDR--WVSKDGLIRLIVPR-MKKELGHGEWDNTID 201 (379)
T ss_dssp T--TT-EEEET---TSC----EEECSEEEECCCTTCHHHHHHCCCEEE--EEEEEEEEEEEEEC-CHHHHCSSCTTSEEE
T ss_pred e--CC-EEEEC---CCC----EEEcCEEEECCCccHHHHHHhcCCCCc--CcCCcEEEEEEech-hhccCCcCCcccccc
Confidence 7 34 56553 453 689999999999999999999863211 11111111111100 000 0000011 111
Q ss_pred E--EEecCceEEEEEecCCCCeEEEEeecCCCCCCCCCCCH--HHHH-------HHHHHHhCCCCCceeEEEecCccccc
Q 008258 280 F--IFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSP--EICE-------KLIFKLVGWELSDIDVIDIKPWVMHA 348 (572)
Q Consensus 280 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~l~~~~~~~~~~~~i~~~~~w~~~~ 348 (572)
. ++.++...++++. ..+...+.+.........+.+.+ ..+. +++...... ....|++..
T Consensus 202 ~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~~~ 271 (379)
T 3alj_A 202 MWNFWPRVQRILYSPC--NENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKL--------KTARYDKYE 271 (379)
T ss_dssp EECCSSSCCEEEEEEC--SSSEEEEEEEECTTCTTTTCSSCCHHHHHHHCGGGHHHHHHHHTC--------TTCCEEEEE
T ss_pred cceEECCCCEEEEEEC--CCCcEEEEEEecCCCCCHHHHHHHHhcCCchhccHHHHHhhCCcc--------ceEEecccc
Confidence 1 2344444333333 33443333332211110111110 1111 222221101 112344333
Q ss_pred -eecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHH
Q 008258 349 -EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQ 426 (572)
Q Consensus 349 -~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~ 426 (572)
..+++|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+. ..+.+.+|++|+++|++++..++..+.+
T Consensus 272 ~~~~~~~~--~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~---~~~~~~~l~~Y~~~r~~~~~~~~~~s~~ 345 (379)
T 3alj_A 272 TTKLDSWT--RGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEE---GSSVEDALVAWETRIRPITDRCQALSGD 345 (379)
T ss_dssp EEEESCSE--ETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTS---SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcc--cCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhcc---ccCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2456776 59999999999999999999999999999999999974 2345789999999999999998888843
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=2.6e-32 Score=296.81 Aligned_cols=350 Identities=15% Similarity=0.142 Sum_probs=216.7
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHH-HHHhhcchHHHHHhcCCCcccccc
Q 008258 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEEIERSQPPVDLWRK 117 (572)
Q Consensus 39 ~~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e-~l~~l~Gl~~~l~~~~~~~~~~~~ 117 (572)
|.+.++||+||||||+||++|+.|+++|++|+||||.+.+... .+..+.++++. +++.+ |+.+.+...+.+......
T Consensus 3 ~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-~g~~~~~~~~~~~l~~l-gl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 3 TRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ-IGESLLPATVHGICAML-GLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp --CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC-SCCBCCHHHHTTHHHHT-TCHHHHHTTTCCEECEEE
T ss_pred CCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCC-CCcccCcchHHHHHHHh-CcHHHHHHcCCccccCce
Confidence 3455689999999999999999999999999999999755433 34556676654 89999 999998877655432222
Q ss_pred eeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEE
Q 008258 118 FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (572)
Q Consensus 118 ~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v 197 (572)
+.+.. ....+. ...... . .......++++|..|.+.|.+.+.+.|+ +++++++|
T Consensus 81 ~~~~~--~~~~~~-~~~~~~-~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~~~~V 134 (512)
T 3e1t_A 81 FRWGK--EPEPWT-FGFTRH-P---DDPYGFAYQVERARFDDMLLRNSERKGV-------------------DVRERHEV 134 (512)
T ss_dssp EECSS--CSSCEE-EESSSS-S---SSTTCCEEBCCHHHHHHHHHHHHHHTTC-------------------EEESSCEE
T ss_pred EEecC--Cccccc-cccccC-C---CCCcceeeEecHHHHHHHHHHHHHhCCC-------------------EEEcCCEE
Confidence 22211 111110 110000 0 0112234678999999999999998887 89999999
Q ss_pred EEEeeeCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCc
Q 008258 198 VSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPG 276 (572)
Q Consensus 198 ~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~ 276 (572)
++++.+++.++ |++.+ .+| ++.+++||+||+|||.+|.+|+++|............+...+.... .. ..+...
T Consensus 135 ~~v~~~~~~v~gv~~~~-~dG--~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~--~~-~~~~~~ 208 (512)
T 3e1t_A 135 IDVLFEGERAVGVRYRN-TEG--VELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGK--RL-PAPRQG 208 (512)
T ss_dssp EEEEEETTEEEEEEEEC-SSS--CEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCC--CC-STTCTT
T ss_pred EEEEEECCEEEEEEEEe-CCC--CEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCc--cC-CCCCcC
Confidence 99999888765 55552 234 3457999999999999999999997643322221222222222110 00 011122
Q ss_pred eEEEEEecCceEEEEEecCCCCeEEEEeecCCCC-CCCCCCCHHHHHHHHHH------HhCCC-------CCceeEEEec
Q 008258 277 MLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFK------LVGWE-------LSDIDVIDIK 342 (572)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~------~~~~~-------~~~~~i~~~~ 342 (572)
..+..+.+....++++. ..+.+.+.+.+.... .......++.+.+++.. .+... ...+.+. .
T Consensus 209 ~~~~~~~~~G~~~~~Pl--~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~--~ 284 (512)
T 3e1t_A 209 NILSAAFQDGWFWYIPL--SDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIR--K 284 (512)
T ss_dssp SEEEEEETTEEEEEEEC--SSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEE--E
T ss_pred ceEEEEeCCceEEEEEe--CCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceee--c
Confidence 23333444443333333 334433332221110 11111223333333321 12111 0011111 0
Q ss_pred CccccceecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCC-CchhhHhhHHHhhhHHHHHhH
Q 008258 343 PWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDI-APASILNTYETERKPIAEFNT 421 (572)
Q Consensus 343 ~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~-~~~~~L~~Y~~eR~~~a~~~~ 421 (572)
.|. ....+|. .+||+|+|||||.++|..|||+|+||+||..|+++|...+++. ..+.+|+.|+++|+++...+.
T Consensus 285 ~~~---~~~~~~~--~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~ 359 (512)
T 3e1t_A 285 DYS---YCNTSFW--KNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFY 359 (512)
T ss_dssp SCC---EEESCSB--CSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc---ccccccc--cCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHH
Confidence 111 1334554 5899999999999999999999999999999999999987654 345789999999999999888
Q ss_pred HHHHHHHHHh
Q 008258 422 ALSVQNFRAA 431 (572)
Q Consensus 422 ~~s~~~~~~~ 431 (572)
+.....+...
T Consensus 360 ~~~~~~y~~~ 369 (512)
T 3e1t_A 360 QFLVAFYDMN 369 (512)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhh
Confidence 8777666544
No 18
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=4.9e-34 Score=299.02 Aligned_cols=324 Identities=14% Similarity=0.080 Sum_probs=200.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchH-HH-HHhcCCCccccccee
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLA-EE-IERSQPPVDLWRKFI 119 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~-~~-l~~~~~~~~~~~~~~ 119 (572)
.||+||||||+||++|+.|+++ |++|+||||.+.+...++++.+++++++.+... ++. +. +.....+. ....
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~ 76 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANP-LSYLDAPERLNPQFL---EDFK 76 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCG-GGGSSCGGGGCCEEE---CCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCc-chhhhhhHHHhhccc---cceE
Confidence 3799999999999999999999 999999999988877889999999887733332 443 33 32222211 1112
Q ss_pred eeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
+.. .|..+.. . .+.....++|..|.+.|.+.+.+.|+ +++++++|++
T Consensus 77 ~~~--~g~~~~~-------~-----~~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~ 123 (381)
T 3c4a_A 77 LVH--HNEPSLM-------S-----TGVLLCGVERRGLVHALRDKCRSQGI-------------------AIRFESPLLE 123 (381)
T ss_dssp EEE--SSSEEEC-------C-----CCSCEEEEEHHHHHHHHHHHHHHTTC-------------------EEETTCCCCS
T ss_pred EEe--CCeeEEe-------c-----CCCceeeecHHHHHHHHHHHHHHCCC-------------------EEEeCCEecc
Confidence 211 2433210 0 01123468899999999999988887 7788888877
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhc----CCccccccCcceEEEEEEecCccccccccCCC
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV----GIDLVGEKDLQKLVSVHFLSKDLGDYLLNERP 275 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~l----g~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 275 (572)
+++.. ++++|+||+|||.+|. |+.+ +....+.. ........... . .+
T Consensus 124 i~~~~------------------~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~---~~~~~~~~~~~------~-~~ 174 (381)
T 3c4a_A 124 HGELP------------------LADYDLVVLANGVNHK-TAHFTEALVPQVDYGR---NKYIWYGTSQL------F-DQ 174 (381)
T ss_dssp GGGCC------------------GGGCSEEEECCGGGGG-TCCSSGGGCCCCEEEE---EEEEEEEESSC------C-SS
T ss_pred chhcc------------------cccCCEEEECCCCCch-HHhhhhhcCCCcccCC---ccEEEEecCCC------C-Cc
Confidence 75420 1359999999999999 9987 32222111 11111111100 0 11
Q ss_pred ceEEEEEecCceEEEEEecCCCCeEEEEeecCCCC---CCCCCCCHHHHHHHHHHHhCCCCCceeEEEe-c-Ccccc-ce
Q 008258 276 GMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ---QNLEDFSPEICEKLIFKLVGWELSDIDVIDI-K-PWVMH-AE 349 (572)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~-~-~w~~~-~~ 349 (572)
...++.+.+.+..++...+...+.+.+.+...+.. .....++++...+.+.+.++......+++.. . .|+.. ..
T Consensus 175 ~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 254 (381)
T 3c4a_A 175 MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGLVSQPGLGWRNFMTL 254 (381)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTCCCBCCTTTCSEEEEEC
T ss_pred ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCCchhhcCCCcceeeeccc
Confidence 11112222322222112233334443333221110 1223456555555555443211011222221 1 46543 34
Q ss_pred ecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHH
Q 008258 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (572)
Q Consensus 350 ~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~ 429 (572)
.+++|. +|||+|+|||||.++|++|||+|+||+||.+|||+|+.. .+.+.+|+.|+++|++++..++..+..+.+
T Consensus 255 ~~~~~~--~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~---~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~ 329 (381)
T 3c4a_A 255 SHDRCH--DGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE---DGVPAALKRFEERALPLVQLFRGHADNSRV 329 (381)
T ss_dssp CCSCSE--ETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcc--cCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 567786 599999999999999999999999999999999999873 346789999999999999999998877765
Q ss_pred Hhccccccc
Q 008258 430 AAMEVPSAL 438 (572)
Q Consensus 430 ~~~~~~~~~ 438 (572)
.+...+..+
T Consensus 330 ~~~~~~~~~ 338 (381)
T 3c4a_A 330 WFETVEERM 338 (381)
T ss_dssp HHHTCSCC-
T ss_pred hhhchhhhh
Confidence 554443333
No 19
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=6.1e-31 Score=278.83 Aligned_cols=342 Identities=14% Similarity=0.133 Sum_probs=212.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+||||||+||++|+.|+++|++|+||||.+.+. ...+..++++++++|+.+ |+.+.+.+.+.+......+.
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~- 79 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEA-GFLDAVKAQGFQQKFGAKFV- 79 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHT-TCHHHHHHTTCEEECEEEEE-
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHc-CChHHHHHcCCcccCCcEEE-
Confidence 456899999999999999999999999999999997654 356778999999999999 99999888764432211111
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.+......+.... .. ..+...++++|..|.+.|.+.+.+.|+ +++++++|+++
T Consensus 80 ----~~~~~~~~~~~~~--~~--~~~~~~~~~~r~~~~~~L~~~a~~~gv-------------------~i~~~~~v~~i 132 (421)
T 3nix_A 80 ----RGKEIADFNFSDQ--FS--NGWNWTWQVPRGNFDKTLADEAARQGV-------------------DVEYEVGVTDI 132 (421)
T ss_dssp ----ETTEEEEEETTSC--SS--CSCCCEEECCHHHHHHHHHHHHHHHTC-------------------EEECSEEEEEE
T ss_pred ----eCCeeEEEeehhh--cC--CCCCceeEECHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEEE
Confidence 1122222211110 00 112234678999999999999998887 89999999999
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEEE
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 280 (572)
+.+++++.+++.. ++| ++++++||+||+|||.+|.+|+.++............+..++........ .......++
T Consensus 133 ~~~~~~~~v~v~~-~~g--~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 207 (421)
T 3nix_A 133 KFFGTDSVTTIED-ING--NKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVA--AEMEGNRIT 207 (421)
T ss_dssp EEETTEEEEEEEE-TTS--CEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC------CCSEEE
T ss_pred EEeCCEEEEEEEc-CCC--CEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCc--cCCCCeEEE
Confidence 9988888777764 244 34579999999999999999999988765544334344333332111000 001112222
Q ss_pred EEecCceEEEEEecCCCCeEEEEeecCCCC-CCCCCCCHHHHHHHHHHHhCCC--CCceeE-EEecCccccceecccccc
Q 008258 281 IFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFKLVGWE--LSDIDV-IDIKPWVMHAEVAEKFLC 356 (572)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~--~~~~~i-~~~~~w~~~~~~a~~~~~ 356 (572)
+......++++..+...+...+.+...+.. .....-.++.+.+++....... ....+. .....|........++.
T Consensus 208 ~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 286 (421)
T 3nix_A 208 AVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLY- 286 (421)
T ss_dssp EEEEETTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSE-
T ss_pred EEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccceeeeeec-
Confidence 221111222323333334544433221111 0111112222333332211000 000000 01112222223344554
Q ss_pred cCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHh
Q 008258 357 CYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFN 420 (572)
Q Consensus 357 ~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~ 420 (572)
.+|++|+|||||.++|+.|+|+|+|++||..|++.|...+++.. ...++.|+++++......
T Consensus 287 -~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~-~~~~~~y~~~~~~~~~~~ 348 (421)
T 3nix_A 287 -GDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEE-VNWEKDFVEHMMQGIDTF 348 (421)
T ss_dssp -ETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCC-CCHHHHTHHHHHHHHHHH
T ss_pred -cCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999887643 357889999988765533
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=5e-32 Score=284.65 Aligned_cols=334 Identities=12% Similarity=0.098 Sum_probs=206.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC-CCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST-HPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~-~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
.++||+||||||+|+++|+.|+++|++|+||||.+.+.. ..++..+++ +.++.+ |+++...... ..+....+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~l-g~~~~~~~~~---~~~~~~~~ 75 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEA-DIKADRSFIA---NEVKGARI 75 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHT-TCCCCTTTEE---EEESEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHc-CCCCChHHhh---hhcceEEE
Confidence 358999999999999999999999999999999986533 445555554 456666 6643211110 11111111
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.+..|......+.. . ......+.++|..|.+.|.+.+.+.|+ +++++++|+++
T Consensus 76 -~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~i 128 (397)
T 3cgv_A 76 -YGPSEKRPIILQSE---K----AGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALGV 128 (397)
T ss_dssp -ECTTCSSCEEEC------------CCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEEE
T ss_pred -EcCCCCEEEEEecc---c----cCCceeEEEeHHHHHHHHHHHHHhCCC-------------------EEEECCEEEEE
Confidence 12223221111100 0 012224678999999999999998887 89999999999
Q ss_pred eeeCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCcc-ccccCcceEEEEEEecCccccccccCCCceE
Q 008258 201 SATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDL-VGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (572)
Q Consensus 201 ~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~-~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 278 (572)
+.+++.++ |++.. .+ ...+++||+||+|||.+|.+|+.+|+.. ..... .....+.+..... ...+...
T Consensus 129 ~~~~~~v~gv~~~~--~~--~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~ 198 (397)
T 3cgv_A 129 IKENGKVAGAKIRH--NN--EIVDVRAKMVIAADGFESEFGRWAGLKSVILARN-DIISALQYRMINV-----DVDPDYT 198 (397)
T ss_dssp EEETTEEEEEEEEE--TT--EEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGG-GEEEEEEEEEESC-----CCCTTEE
T ss_pred EEeCCEEEEEEEEE--CC--eEEEEEcCEEEECCCcchHhHHhcCCCccCCChh-heeEEEEEEeccC-----CCCCCcE
Confidence 99888887 77752 22 2347999999999999999999998765 32111 1111111111110 1113333
Q ss_pred EEEE---ecCceEEEEEecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCC----CCceeEEEecCccccceec
Q 008258 279 FFIF---NTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWE----LSDIDVIDIKPWVMHAEVA 351 (572)
Q Consensus 279 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~i~~~~~w~~~~~~a 351 (572)
.+++ .|....++++.. .+.+.+.+....... .......+.+++++... ...+.......+++. ...
T Consensus 199 ~~~~~~~~~~g~~~~~P~~--~~~~~vg~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~ 271 (397)
T 3cgv_A 199 DFYLGSIAPAGYIWVFPKG--EGMANVGIGSSINWI----HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVS-KVK 271 (397)
T ss_dssp EEECSTTSTTEEEEEEEEE--TTEEEEEEEEETTTC----SCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECC-CCC
T ss_pred EEEeCCcCCCceEEEEECC--CCeEEEEEEeccccc----cCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecC-CCc
Confidence 3333 234334444433 244443333222211 12223333444433221 112222222233332 234
Q ss_pred ccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHh-cCCCchhhHhhHHHhhhHHHHHhHHHHHHHH
Q 008258 352 EKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL-KDIAPASILNTYETERKPIAEFNTALSVQNF 428 (572)
Q Consensus 352 ~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~-~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~ 428 (572)
.+|. .+||+++|||||.++|++|+|+|+|++||..|+++|+..+ ++...+.+|+.|+++|++........+....
T Consensus 272 ~~~~--~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~ 347 (397)
T 3cgv_A 272 MPIT--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAK 347 (397)
T ss_dssp SCCE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccee--eCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5564 5999999999999999999999999999999999999877 5666788999999999998877666665433
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.2e-31 Score=287.23 Aligned_cols=333 Identities=15% Similarity=0.086 Sum_probs=204.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC--CCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccce
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS--THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKF 118 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~--~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~ 118 (572)
+.++||+||||||+|+++|+.|+++|++|+||||.+.+. ...++..+ +.+.|+.+ |+.+...... ...+...
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~l-g~~~~~~~~~--~~~~~~~ 77 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKL-GMPYPKGEEL--ENKINGI 77 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHT-TCCCCCGGGE--EEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHh-cCCCCchHHH--Hhhhcce
Confidence 346899999999999999999999999999999987642 23345555 45677777 6543211100 0000111
Q ss_pred eeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEE
Q 008258 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (572)
Q Consensus 119 ~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~ 198 (572)
... +..+... +. .+...+.++|..|.+.|.+.+.+.|+ +++++++|+
T Consensus 78 ~~~-~~~~~~~----------~~---~~~~~~~i~r~~l~~~L~~~a~~~gv-------------------~i~~~~~v~ 124 (453)
T 3atr_A 78 KLY-SPDMQTV----------WT---VNGEGFELNAPLYNQRVLKEAQDRGV-------------------EIWDLTTAM 124 (453)
T ss_dssp EEE-CTTSSCE----------EE---EEEEEEEECHHHHHHHHHHHHHHTTC-------------------EEESSEEEE
T ss_pred EEE-CCCCceE----------Ee---ECCCcEEEcHHHHHHHHHHHHHHcCC-------------------EEEeCcEEE
Confidence 110 1111100 00 01123568899999999999988876 899999999
Q ss_pred EEeeeCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCcccc--cc---CcceEEEEEEecCcccccccc
Q 008258 199 SVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVG--EK---DLQKLVSVHFLSKDLGDYLLN 272 (572)
Q Consensus 199 ~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g--~~---~~~~~~~~~~~~~~l~~~~~~ 272 (572)
+++++++.++ |++....+| ++.+++||+||+|||.+|.+|+.++..... .. .+...+...+..... .
T Consensus 125 ~i~~~~~~v~gv~~~~~~~G--~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 197 (453)
T 3atr_A 125 KPIFEDGYVKGAVLFNRRTN--EELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKED-----I 197 (453)
T ss_dssp EEEEETTEEEEEEEEETTTT--EEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSC-----C
T ss_pred EEEEECCEEEEEEEEEcCCC--ceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCC-----c
Confidence 9999888776 666522134 345799999999999999999999875421 11 111111111111100 0
Q ss_pred CCCceEEEEEe----cCceEEEEEecCCCCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCccc-c
Q 008258 273 ERPGMLFFIFN----TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVM-H 347 (572)
Q Consensus 273 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w~~-~ 347 (572)
..+....+++. |+...++++.. .+.+.+.+........ . -..+.+.+.+++... .....++.....+.+ .
T Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~~P~~--~~~~~vg~~~~~~~~~-~-~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~p~ 272 (453)
T 3atr_A 198 EDHDYLRIFIDQETSPGGYWWYFPKG--KNKVNVGLGIQGGMGY-P-SIHEYYKKYLDKYAP-DVDKSKLLVKGGALVPT 272 (453)
T ss_dssp TTTTEEEEECCTTTSTTSCEEEEEEE--TTEEEEEEEEESSSCC-C-CHHHHHHHHHHHHCT-TEEEEEEEEEEEEEEEC
T ss_pred cCCCeEEEEECCCCCCCcEEEEEECC--CCeEEEEEEecCCCCC-C-CHHHHHHHHHHhhhh-hcCCCeEEeccceeccC
Confidence 12233323332 34444444443 2444443332221111 1 123455556655321 111123333222211 1
Q ss_pred ceecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhc-CCCchhhHhhHHHhhhHHHHHhHHHHHH
Q 008258 348 AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSVQ 426 (572)
Q Consensus 348 ~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~-g~~~~~~L~~Y~~eR~~~a~~~~~~s~~ 426 (572)
....++|. .+||+|+|||||.++|++|||+|+||+||.+||++|+..++ ++..+.+|+.|+++|+++....+..+..
T Consensus 273 ~~~~~~~~--~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~ 350 (453)
T 3atr_A 273 RRPLYTMA--WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDI 350 (453)
T ss_dssp SSCCSCSE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHH
T ss_pred CCCCCcee--cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455665 59999999999999999999999999999999999998765 4445789999999999998776665543
No 22
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=1.9e-31 Score=293.10 Aligned_cols=347 Identities=15% Similarity=0.206 Sum_probs=216.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+||||||+|+++|+.|+++|++|+||||.+.+.. ..+..++++++++|+.+ |+++.+...+........+.+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-~~G~~l~p~~~~~l~~l-Gl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-RVGESLLPGTMSILNRL-GLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-CCCCBCCHHHHHHHHHT-TCHHHHHHHCCEEECEEEEEC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-ceeeeECHHHHHHHHHc-CCcHHHHhcCCcccCCcEEEe
Confidence 3468999999999999999999999999999999876543 44778999999999999 999988876544322122222
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.. .+.. ........ .... ......+++++..|...|.+.+.+.|+ +++++++|+++
T Consensus 99 ~~--~~~~-~~~~~~~~-~~~~-~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~g~~V~~v 154 (591)
T 3i3l_A 99 GQ--DQAP-WTFSFAAP-KVAP-WVFDHAVQVKREEFDKLLLDEARSRGI-------------------TVHEETPVTDV 154 (591)
T ss_dssp SS--SCCC-EEEECCCC---CT-TCCSCEEECCHHHHHHHHHHHHHHTTC-------------------EEETTCCEEEE
T ss_pred cC--CCcc-ceeecccc-cccc-cccCeeEEEcHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEE
Confidence 11 1111 01110000 0000 011224678999999999999998887 89999999999
Q ss_pred eee-CCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEE
Q 008258 201 SAT-DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (572)
Q Consensus 201 ~~~-~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 279 (572)
+.+ ++.+.|++.. +| .+.+++||+||+|||.+|.+|+.+++...........+...+.... . ...+.....+
T Consensus 155 ~~~~g~~~~V~~~~--~G--~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~--~-~~~~~~~~~~ 227 (591)
T 3i3l_A 155 DLSDPDRVVLTVRR--GG--ESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKD--P-FEGDLKGTTY 227 (591)
T ss_dssp ECCSTTCEEEEEEE--TT--EEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCC--S-CCSTTTTCEE
T ss_pred EEcCCCEEEEEEec--CC--ceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCc--c-ccCCCCCceE
Confidence 875 5667777652 44 3357999999999999999999998754322111111222222111 0 0111223333
Q ss_pred EEEecCceEEEEEecCCCCeEEEEeecCCCCC-CCCCCCHHHHHHHH-------HHHhCCC--CCceeEEEecCccccce
Q 008258 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQ-NLEDFSPEICEKLI-------FKLVGWE--LSDIDVIDIKPWVMHAE 349 (572)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l-------~~~~~~~--~~~~~i~~~~~w~~~~~ 349 (572)
..+.+.+..+.++. ..+.+.+.+...+... .....+.+...+.+ ...+... ...... ...|. .
T Consensus 228 ~~~~~~G~~w~iPl--~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~--~~~~~---~ 300 (591)
T 3i3l_A 228 SITFEDGWVWMIPI--KDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRI--VQDWS---Y 300 (591)
T ss_dssp EEEETTEEEEEEEC--SSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEE--EEEEE---E
T ss_pred EEEcCCcEEEEEEC--CCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceE--ecccc---c
Confidence 44445544443433 3344444332211110 00001111111111 1111110 001111 11232 2
Q ss_pred ecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCC-chhhHhhHHHhhhHHHHHhHHHHHHHH
Q 008258 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEFNTALSVQNF 428 (572)
Q Consensus 350 ~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~-~~~~L~~Y~~eR~~~a~~~~~~s~~~~ 428 (572)
...+|. .+||+++|||||.++|..|||+|+|++||..||++|...+++.. .+.+++.|+++|++....+.+.....|
T Consensus 301 ~~~~~~--~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 301 DTEVFS--ADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp EESCSE--ETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcc--cCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334554 59999999999999999999999999999999999998876543 466899999999999999888887777
Q ss_pred H
Q 008258 429 R 429 (572)
Q Consensus 429 ~ 429 (572)
.
T Consensus 379 ~ 379 (591)
T 3i3l_A 379 T 379 (591)
T ss_dssp H
T ss_pred H
Confidence 3
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.97 E-value=8e-31 Score=286.08 Aligned_cols=343 Identities=13% Similarity=0.116 Sum_probs=205.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHh------------CCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHH--HHh
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTK------------LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IER 107 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~------------~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~--l~~ 107 (572)
..+||+||||||+|+++|+.|++ .|++|+|||+.+.+.. +.+..+.++++++|+.+ |+.+. +.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~-g~g~~~~p~~~~~l~~l-Gi~e~~~~~~ 83 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATI-GVGEGTWPSMRSTLSKI-GIDENDFIRQ 83 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCC-CSCEECCTHHHHHHHHH-TCCHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCc-ceeeechHhHHHHHHHc-CCCHHHHHHH
Confidence 45799999999999999999999 9999999999765543 33788999999999999 99886 565
Q ss_pred cCCCccc------ccc-------eeeeeCC-CCCeeeeecC---CC----c-------------------------cccc
Q 008258 108 SQPPVDL------WRK-------FIYCTSV-TGPILGSVDH---MQ----P-------------------------QDFE 141 (572)
Q Consensus 108 ~~~~~~~------~~~-------~~~~~~~-~G~~~~~~~~---~~----~-------------------------~~~~ 141 (572)
.+.+... |.. ..+.... .|..+...+. +. . ..+.
T Consensus 84 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~ 163 (526)
T 2pyx_A 84 CDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYH 163 (526)
T ss_dssp TTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTC
T ss_pred cCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccC
Confidence 4432111 110 0000000 0100000000 00 0 0000
Q ss_pred cccCCccccccChhhHHHHHHHHHHh-cCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCcee
Q 008258 142 KVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCT 220 (572)
Q Consensus 142 ~~~sp~~~~~l~q~~L~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~ 220 (572)
......++++|..|.+.|.+.+.+ .|+ +++++ +|++++++++++.+.+... +|.
T Consensus 164 --~~~~~~~~~~r~~l~~~L~~~a~~~~Gv-------------------~i~~~-~v~~i~~~~~g~~~~v~~~-~g~-- 218 (526)
T 2pyx_A 164 --FQNNYGYHLNAAKFSQLLTEHCTQKLGV-------------------THIRD-HVSQIINNQHGDIEKLITK-QNG-- 218 (526)
T ss_dssp --CSSCCEEEECHHHHHHHHHHHHHHTSCC-------------------EEEEC-CEEEEEECTTSCEEEEEES-SSC--
T ss_pred --CCCCeeEEEcHHHHHHHHHHHHHhcCCC-------------------EEEEe-EEEEEEecCCCcEEEEEEC-CCC--
Confidence 011123678999999999999988 787 88899 6999988766654444432 443
Q ss_pred eEEEEecEEEeecCCChhh-hhhcCCccccccC---cceEEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCC
Q 008258 221 ERNIQCNILIGTDGAGSTV-RKLVGIDLVGEKD---LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLK 296 (572)
Q Consensus 221 ~~~i~ad~vVgADG~~S~V-R~~lg~~~~g~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (572)
+++||+||+|||.+|.+ |+.+|.++.+... ....+.+......... ...+... ....+....+.++..
T Consensus 219 --~i~ad~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~g~~~~~pl~-- 290 (526)
T 2pyx_A 219 --EISGQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANS---PIASCTH-STAQPNGWIWDIGLP-- 290 (526)
T ss_dssp --EEECSEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTC---CCCSSEE-EEEETTEEEEEEECS--
T ss_pred --EEEcCEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCC---CCCCcee-EEecCCCeEEEeeCC--
Confidence 48999999999999999 6778876643321 1122222221110000 0111111 122333333333322
Q ss_pred CCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCccccceecccccccCCcEEEEecccccCCCCCC
Q 008258 297 EGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGG 376 (572)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G 376 (572)
....+..+ +.+ ...+++...+.+++.+......+.......|.+......+|. .|||+|+|||||.++|+.|
T Consensus 291 ~~~~~~~v-~~~-----~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAh~~~P~~G 362 (526)
T 2pyx_A 291 TRKGVGYV-YSS-----SHTNDIDAQKTLFNYLGVDGAAADKLEPRQLAINPGYRAKCW--QNNCIAIGMAAGFIEPLEA 362 (526)
T ss_dssp SEEEEEEE-ECT-----TTCCHHHHHHHHHHHHTCCHHHHHHCCCEEEECCCEEESCSE--ETTEEECGGGTEECCCTTC
T ss_pred CceEEEEE-ecC-----CCCChHHHHHHHHHHHHhcCcccccCCceEEecccCcccccc--CCCEEEEEhhhcccCcccc
Confidence 22221111 111 112344445555555422100111011123333344455664 5999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHH
Q 008258 377 FGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (572)
Q Consensus 377 ~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~ 429 (572)
||+|+|++||..|+..|... +...+.+|++|+++|+++.+.+.+.....+.
T Consensus 363 qGi~~ai~da~~La~~L~~~--~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 413 (526)
T 2pyx_A 363 SALALIEWTASTLAQQLPPN--RMVMDTISARVNERYQQHWQQIIDFLKLHYV 413 (526)
T ss_dssp HHHHHHHHHHHHHHHTCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhc--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888777521 1234689999999999999888776655553
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=1.5e-28 Score=270.57 Aligned_cols=332 Identities=16% Similarity=0.124 Sum_probs=191.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC------CCCEEEEcCCCCCCCC-CCeeeeChhHHHHHHhhcchHHHHHhcCCCcc
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAFSTH-PQAHFINNRYALVFRKLDGLAEEIERSQPPVD 113 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~------Gi~v~viEr~~~~~~~-~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~ 113 (572)
.+++||+||||||+||++|+.|+++ |++|+||||.+.+..+ .++..+++++++.| ++.+ ...+.+..
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~~~----~~~g~~~~ 106 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FPDW----KEKGAPLN 106 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CTTH----HHHTCCCC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HHHH----HhcCCcee
Confidence 3468999999999999999999999 9999999999876443 45677899998876 4222 22233332
Q ss_pred cc---cceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccce
Q 008258 114 LW---RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGRE 190 (572)
Q Consensus 114 ~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 190 (572)
.. ..+.+.. ..+. + .++...... ......+.++|..|++.|.+.+++.|+ +
T Consensus 107 ~~~~~~~~~~~~-~~~~-~-~~~~~~~~~----~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~ 160 (584)
T 2gmh_A 107 TPVTEDRFGILT-EKYR-I-PVPILPGLP----MNNHGNYVVRLGHLVSWMGEQAEALGV-------------------E 160 (584)
T ss_dssp EECCEEEEEEEC-SSCE-E-ECCCCTTST----TCCTTCEECCHHHHHHHHHHHHHHTTC-------------------E
T ss_pred eeechhheeeec-cCCC-c-cccccCccc----cccCCCEEEeHHHHHHHHHHHHHHcCC-------------------E
Confidence 10 0111111 1111 1 111000000 111223568899999999999998887 8
Q ss_pred EEeccEEEEEeeeCCe-EE-EEEEec---cCCce-----eeEEEEecEEEeecCCChhhhhhc----CCccccccCcce-
Q 008258 191 ILMGHECVSVSATDQC-IN-VIASFL---KEGKC-----TERNIQCNILIGTDGAGSTVRKLV----GIDLVGEKDLQK- 255 (572)
Q Consensus 191 i~~g~~v~~v~~~~~~-v~-v~~~~~---~~g~~-----~~~~i~ad~vVgADG~~S~VR~~l----g~~~~g~~~~~~- 255 (572)
|+++++++++..++++ |+ |++... .+|+. ...+++||+||+|||++|.+|+++ ++..........
T Consensus 161 i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~ 240 (584)
T 2gmh_A 161 VYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 240 (584)
T ss_dssp EETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE
T ss_pred EEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh
Confidence 9999999999887654 43 444310 13321 013799999999999999999887 554322221111
Q ss_pred EEEEEEecCccccccccCCCceEEEEEe-c---C--ceEEEEEecCCCCeEEEEeecCCCCCCCCCCCH-HHHHHHH---
Q 008258 256 LVSVHFLSKDLGDYLLNERPGMLFFIFN-T---E--AIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSP-EICEKLI--- 325 (572)
Q Consensus 256 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l--- 325 (572)
.+...+.. +.. ...++....++. | . ..++++......+.+.+.+........ ...++ +.+.+++
T Consensus 241 g~~~~~~v-~~~----~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~~~~l~~~~~~p 314 (584)
T 2gmh_A 241 GLKELWVI-DEK----KWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQN-PYLSPFREFQRWKHHP 314 (584)
T ss_dssp EEEEEEEC-CGG----GCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCC-TTCCHHHHHHHHTTST
T ss_pred hhhhheec-Ccc----cccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCccc-ccCChHHHHHHHHhCh
Confidence 11111111 100 112333222221 1 1 112333222103444444322221111 11222 3333221
Q ss_pred --HHHhCCCCCceeEEEe---cCccccceecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCC
Q 008258 326 --FKLVGWELSDIDVIDI---KPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDI 400 (572)
Q Consensus 326 --~~~~~~~~~~~~i~~~---~~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~ 400 (572)
...+.. .+.... ..|.......++|. .+||+|+|||||.++|+.|||+|+||+||.+|||+|+.+++..
T Consensus 315 ~i~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~--~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g 388 (584)
T 2gmh_A 315 SIKPTLEG----GKRIAYGARALNEGGFQSIPKLT--FPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSE 388 (584)
T ss_dssp TTHHHHTT----CEEEEEEEEEEECCGGGGCCCCE--ETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhCC----CeEEEecceEccCCCcccCCccc--cCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 111211 122211 11222334456675 5999999999999999999999999999999999999988532
Q ss_pred --Cchhh---HhhHHHhhhHH
Q 008258 401 --APASI---LNTYETERKPI 416 (572)
Q Consensus 401 --~~~~~---L~~Y~~eR~~~ 416 (572)
..+.+ |++|+++|++.
T Consensus 389 ~~~~~~a~~~L~~Ye~~r~~~ 409 (584)
T 2gmh_A 389 NLQSKTIGLHVTEYEDNLKNS 409 (584)
T ss_dssp CCCCSSSSCCCTHHHHHHHTS
T ss_pred CcchhhhhhhHHHHHHHHHHh
Confidence 33453 99999999976
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.96 E-value=3.8e-28 Score=264.16 Aligned_cols=336 Identities=13% Similarity=0.103 Sum_probs=200.9
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHH--HHhcCCCccc----
Q 008258 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IERSQPPVDL---- 114 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~---~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~--l~~~~~~~~~---- 114 (572)
+||+||||||+|+++|+.|++ .|++|+||||.+.+. .+.+..+.++++++++.+ |+.+. +.........
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~-~~~g~~~~~~~~~~l~~l-gi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRR-IGVGEATFSTVRHFFDYL-GLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHH-TCCHHHHHHHTTCEEECEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCc-eeeccccCcchHHHHHHc-CCCHHHHHHHcCCeEecccee
Confidence 699999999999999999999 999999999976443 345667889999999999 88775 5544322211
Q ss_pred --ccc--eeeeeCCC------CCee------------e------------eecCCC----cccc----c------c--cc
Q 008258 115 --WRK--FIYCTSVT------GPIL------------G------------SVDHMQ----PQDF----E------K--VV 144 (572)
Q Consensus 115 --~~~--~~~~~~~~------G~~~------------~------------~~~~~~----~~~~----~------~--~~ 144 (572)
|.. ..+..... +..+ . ...... ...+ . . ..
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 110 00000000 0000 0 000000 0001 0 0 00
Q ss_pred C--CccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeE
Q 008258 145 S--PVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTER 222 (572)
Q Consensus 145 s--p~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~ 222 (572)
. ....++++|..|.+.|.+.+.+.|+ +++++ +|+++++++++..+.+... +|+
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~~~~~~v~~~-~g~---- 215 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGV-------------------RHVVD-DVQHVGQDERGWISGVHTK-QHG---- 215 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEES-SSC----
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCC-------------------EEEEC-eEeEEEEcCCCCEEEEEEC-CCC----
Confidence 0 1223678999999999999998887 88999 9999998766633333322 453
Q ss_pred EEEecEEEeecCCChhhh-hhcCCcccccc---CcceEEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCCCC
Q 008258 223 NIQCNILIGTDGAGSTVR-KLVGIDLVGEK---DLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEG 298 (572)
Q Consensus 223 ~i~ad~vVgADG~~S~VR-~~lg~~~~g~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (572)
+++||+||+|||.+|.+| +.+|.++.+.. .....+.+........ ...+. ......+....++++.. +
T Consensus 216 ~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~g~~~~~P~~---~ 287 (511)
T 2weu_A 216 EISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDE----DMRPY-TTATAMSAGWMWTIPLF---K 287 (511)
T ss_dssp EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGG----GCCSS-EEEEEETTEEEEEEECS---S
T ss_pred EEEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCCC----CCCcc-eeceecCCCcEEEEECC---C
Confidence 689999999999999995 45677654321 1112222222211100 01111 12223444333333332 1
Q ss_pred eEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCCCC--ceeEEEecCccccceecccccccCCcEEEEecccccCCCCCC
Q 008258 299 EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELS--DIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGG 376 (572)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~i~~~~~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G 376 (572)
...+.+.+.. ...+++...+.+.+.++..+. ....+ ..| ....+++. .+||+|+|||||.++|+.|
T Consensus 288 ~~~~g~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~---~~~~~~~~--~~rv~liGDAAh~~~P~~g 355 (511)
T 2weu_A 288 RDGNGYVYSD-----EFISPEEAERELRSTVAPGRDDLEANHI--QMR---IGRNERTW--INNCVAVGLSAAFVEPLES 355 (511)
T ss_dssp EEEEEEEECT-----TTSCHHHHHHHHHHHHCTTCTTSCCEEE--ECC---CEEESCSE--ETTEEECGGGTEECCGGGC
T ss_pred ceEEEEEECC-----CCCCHHHHHHHHHHHhCcccccccceeE--Eee---cccccccc--CCCEEEEechhhccCcccc
Confidence 2222222211 123556666667776665432 11222 122 22344553 5999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHH
Q 008258 377 FGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (572)
Q Consensus 377 ~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~ 429 (572)
+|+|+|++||..|++.|.. +...+.+|+.|+++|+++.+.+.+.....+.
T Consensus 356 ~G~~~a~~da~~La~~l~~---~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 405 (511)
T 2weu_A 356 TGIFFIQHAIEQLVKHFPG---ERWDPVLISAYNERMAHMVDGVKEFLVLHYK 405 (511)
T ss_dssp CHHHHHHHHHHHHHHTCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988862 4456789999999999999887776554444
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.96 E-value=5.2e-28 Score=264.57 Aligned_cols=338 Identities=13% Similarity=0.118 Sum_probs=202.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCCeeeeChhHHH-HHHhhcchHHH--HHhcCCCcc--
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPVD-- 113 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~---~Gi~v~viEr~~~~~~~~~a~~l~~rt~e-~l~~l~Gl~~~--l~~~~~~~~-- 113 (572)
..+||+||||||+|+++|+.|++ .|++|+||||.+.+. .+.+..+.+++++ +++.+ |+.+. +........
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~l-G~~~~~~~~~~~~~~~~g 81 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR-IGVGEATIPSLQKVFFDFL-GIPEREWMPQVNGAFKAA 81 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC-CCSCEECCTHHHHHTHHHH-TCCHHHHGGGGTCEEECE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC-cCCCcccchhHHHHHHHHh-CCCHHHHHHhcCchhhCC
Confidence 45799999999999999999999 999999999976443 3347788899999 99999 88764 443332221
Q ss_pred ----cccce-------eeeeCCCCCeeeeecCCC-------------cccc-------------c-------cccCCccc
Q 008258 114 ----LWRKF-------IYCTSVTGPILGSVDHMQ-------------PQDF-------------E-------KVVSPVSV 149 (572)
Q Consensus 114 ----~~~~~-------~~~~~~~G~~~~~~~~~~-------------~~~~-------------~-------~~~sp~~~ 149 (572)
.|... .+.. ..|... ..+... ...+ . ........
T Consensus 82 ~~~~~w~~~l~~~~~~~~~~-~~g~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 159 (538)
T 2aqj_A 82 IKFVNWRKSPDPSRDDHFYH-LFGNVP-NCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHA 159 (538)
T ss_dssp EEEESCSSSCCTTSCCEEEE-ESSCCC-EETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCE
T ss_pred ccccCcCcccccCCCCceEC-CCCccC-ccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCcc
Confidence 11100 0000 011000 000000 0000 0 00001123
Q ss_pred cccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEE
Q 008258 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (572)
Q Consensus 150 ~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~v 229 (572)
+++++..|.+.|.+.+.+.|+ +++++ +|++++.++++..+.+... +|+ +++||+|
T Consensus 160 ~~i~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~g~~~~v~~~-~g~----~i~ad~v 214 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAVERGV-------------------NRVVD-EVVDVRLNNRGYISNLLTK-EGR----TLEADLF 214 (538)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEET-TSC----EECCSEE
T ss_pred EEEeHHHHHHHHHHHHHHCCC-------------------EEEEe-eEeEEEEcCCCcEEEEEEC-CCc----EEEeCEE
Confidence 678999999999999988887 88888 8999988766533333322 453 6899999
Q ss_pred EeecCCChhhhh-hcCCccccccCc---ceEEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCCCCeEEEEee
Q 008258 230 IGTDGAGSTVRK-LVGIDLVGEKDL---QKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVP 305 (572)
Q Consensus 230 VgADG~~S~VR~-~lg~~~~g~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (572)
|+|||.+|.+|+ .+|..+.+...+ ...+.+...... .. ....+.. .....+.+..++++... ...+.+.
T Consensus 215 V~A~G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~-~~~~~~~g~~~~~p~~~---~~~~g~v 287 (538)
T 2aqj_A 215 IDCSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDD--AR-DGVEPYT-SSIAMNSGWTWKIPMLG---RFGSGYV 287 (538)
T ss_dssp EECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCH--HH-HCCCSSE-EEEECSSEEEEEEEETT---EEEEEEE
T ss_pred EECCCCchhhHHHHhCCCccccccccccceEEEEecccCC--cc-cCCCCce-eeeecCCceEEEecCCC---ceEEEEE
Confidence 999999999954 567665433221 122222221110 00 0001111 11223333333333321 2222222
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHhCCCCCceeEEEecCccccceecccccccCCcEEEEecccccCCCCCCCCchhHHHH
Q 008258 306 FYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQD 385 (572)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~D 385 (572)
+.. ...+++...+.+++.++..+. . ....|.+.....++|. .|||+|+|||||.++|+.|||+|+|++|
T Consensus 288 ~~~-----~~~~~~~~~~~l~~~~~~~~~-~---~~~~~~~~~~~~~~~~--~grvvliGDAAh~~~P~~gqG~~~a~~d 356 (538)
T 2aqj_A 288 FSS-----HFTSRDQATADFLKLWGLSDN-Q---PLNQIKFRVGRNKRAW--VNNCVSIGLSSCFLEPLESTGIYFIYAA 356 (538)
T ss_dssp ECT-----TTSCHHHHHHHHHHHHTCCTT-C---CCEEEECCCEEESCSE--ETTEEECGGGTEECCGGGSCHHHHHHHH
T ss_pred EcC-----CCCChHHHHHHHHHHhcCCCC-C---CceEEeeccccccccc--cCCEEEEcccccccCcchhccHHHHHHH
Confidence 211 122455566666666643221 1 1122333333445554 5999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHH
Q 008258 386 AHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (572)
Q Consensus 386 A~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~ 429 (572)
|.+|+..|. .+...+.+|+.|+++|+++.+.+.+.....+.
T Consensus 357 a~~La~~L~---~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 397 (538)
T 2aqj_A 357 LYQLVKHFP---DTSFDPRLSDAFNAEIVHMFDDCRDFVQAHYF 397 (538)
T ss_dssp HHHHHHTCC---BTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999998775 34556789999999999998887775555543
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.96 E-value=3.1e-28 Score=266.91 Aligned_cols=340 Identities=11% Similarity=0.078 Sum_probs=204.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCCCCCCCeeeeChhHHH-HHHhhcchHHH--HHhcCCCccc
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPVDL 114 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~---~Gi~v~viEr~~~~~~~~~a~~l~~rt~e-~l~~l~Gl~~~--l~~~~~~~~~ 114 (572)
+..+||+||||||+|+++|+.|++ .|++|+|||+.+.+.. +.+..+.+++++ +++.+ |+.+. +.....+...
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~-~~g~~~~p~~~~~~l~~l-Gi~~~~~~~~~~~~~~~ 100 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTL-GVGEATIPNLQTAFFDFL-GIPEDEWMRECNASYKV 100 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCC-CCCEECCTHHHHHTHHHH-TCCHHHHHHHTTCEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCcc-ceeeeechhHHHHHHHHh-CCChHHHHHhcCCeEEE
Confidence 345799999999999999999999 9999999999765443 346788899999 99999 88765 5543322211
Q ss_pred ccce-eeeeCC---------C--CCee-eeecCC---------------------C-c-----------cccc-------
Q 008258 115 WRKF-IYCTSV---------T--GPIL-GSVDHM---------------------Q-P-----------QDFE------- 141 (572)
Q Consensus 115 ~~~~-~~~~~~---------~--G~~~-~~~~~~---------------------~-~-----------~~~~------- 141 (572)
-..+ .|.... + +... ...... . . .++.
T Consensus 101 g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (550)
T 2e4g_A 101 AIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLD 180 (550)
T ss_dssp EEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTT
T ss_pred eeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhc
Confidence 0000 000000 0 0000 000000 0 0 0000
Q ss_pred cccCCccccccChhhHHHHHHHHHHhc-CceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCcee
Q 008258 142 KVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCT 220 (572)
Q Consensus 142 ~~~sp~~~~~l~q~~L~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~ 220 (572)
........+++++..|.+.|.+.+.+. |+ +++++ +|++++.++++..+.+... +|+
T Consensus 181 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv-------------------~i~~~-~V~~i~~~~~g~~~~v~~~-~G~-- 237 (550)
T 2e4g_A 181 GSKVTNYAWHFDAHLVADFLRRFATEKLGV-------------------RHVED-RVEHVQRDANGNIESVRTA-TGR-- 237 (550)
T ss_dssp SCBCSCCEEEECHHHHHHHHHHHHHHHSCC-------------------EEEEC-CEEEEEECTTSCEEEEEET-TSC--
T ss_pred CCCCCCcceEEcHHHHHHHHHHHHHhcCCc-------------------EEEEC-eEeEEEEcCCCCEEEEEEC-CCC--
Confidence 000011235689999999999999888 87 88999 9999988766533333322 453
Q ss_pred eEEEEecEEEeecCCChhh-hhhcCCccccccCc---ceEEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCC
Q 008258 221 ERNIQCNILIGTDGAGSTV-RKLVGIDLVGEKDL---QKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLK 296 (572)
Q Consensus 221 ~~~i~ad~vVgADG~~S~V-R~~lg~~~~g~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (572)
+++||+||+|||.+|.+ ++.+|..+.+...+ ...+.+........ ....+... ....+....+.++.+.
T Consensus 238 --~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~g~~~~ipl~~- 310 (550)
T 2e4g_A 238 --VFDADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDDA---NGVEPFTS-AIAMKSGWTWKIPMLG- 310 (550)
T ss_dssp --EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHH---HCCCSSEE-EEECSSEEEEEEECSS-
T ss_pred --EEECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccCCc---ccCCCcee-eeecCCceEEEccCCC-
Confidence 68999999999999999 56678765433221 12222222111000 00111111 1112222222232221
Q ss_pred CCeEEEEeecCCCCCCCCCCCHHHHHHHHHHHhCCCCC--ceeEEEecCccccceecccccccCCcEEEEecccccCCCC
Q 008258 297 EGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELS--DIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPA 374 (572)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~i~~~~~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~ 374 (572)
.....+.+.. ...+++...+.+++.++..+. ....+ .+.....+++. .+||+|+|||||.++|+
T Consensus 311 --~~~~g~v~~~-----~~~~~~~~~~~l~~~~~~~p~l~~~~~i-----~~~~~~~~~~~--~~rvvliGDAAh~~~P~ 376 (550)
T 2e4g_A 311 --RFGTGYVYSS-----RFATEDEAVREFCEMWHLDPETQPLNRI-----RFRVGRNRRAW--VGNCVSIGTSSCFVEPL 376 (550)
T ss_dssp --EEEEEEEECT-----TTSCHHHHHHHHHHHTTCCTTTSCCEEE-----ECCCEEESCSE--ETTEEECSTTTEECCGG
T ss_pred --ccceEEEEec-----CCCChHHHHHHHHHhhCcCcccCCCceE-----EecCCCccccc--cCCEEEEehhhcccCcc
Confidence 1111111111 123555666677777665421 11222 22233344443 59999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhhHHHhhhHHHHHhHHHHHHHHH
Q 008258 375 GGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (572)
Q Consensus 375 ~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~~~~s~~~~~ 429 (572)
.|||+|+|++||.+|++.|. ++...+.+|++|+++|+++.+.+.+.....+.
T Consensus 377 ~GqGi~~a~~da~~La~~L~---~~~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~ 428 (550)
T 2e4g_A 377 ESTGIYFVYAALYQLVKHFP---DKSLNPVLTARFNREIETMFDDTRDFIQAHFY 428 (550)
T ss_dssp GSCHHHHHHHHHHHHHHTCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875 34566889999999999999988877666665
No 28
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.96 E-value=4.9e-29 Score=269.56 Aligned_cols=310 Identities=20% Similarity=0.219 Sum_probs=194.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
...+||+||||||+||++|+.|++.|++|+||||.+.+.. .+...+.+++++.|+.+ |+.+... .+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~~~~~l~~~-g~~~~~~----------~~-- 155 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPFTIHDLRAL-GAKKFYG----------RF-- 155 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHHHHHHHHTT-THHHHCT----------TT--
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChhHHHHHHHc-CCccccc----------cc--
Confidence 3458999999999999999999999999999999877632 35567889999999998 8765310 00
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
. ......+++..+.+.|.+.+.+.|+ +++++++|+++
T Consensus 156 ----~--------------------~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~i 192 (497)
T 2bry_A 156 ----C--------------------TGTLDHISIRQLQLLLLKVALLLGV-------------------EIHWGVKFTGL 192 (497)
T ss_dssp ----T--------------------CTTCCEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEEE
T ss_pred ----c--------------------ccccccCCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEE
Confidence 0 0011246788999999999988776 89999999999
Q ss_pred eee---CCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCccccccCcceEEEEEEecCccccccccCCCce
Q 008258 201 SAT---DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (572)
Q Consensus 201 ~~~---~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 277 (572)
+++ ++.+.|++....+| ++.++++|+||+|||++|.+|+..++.+.|...+.....+... ..+.........+.
T Consensus 193 ~~~~~~~~~~~v~~~~~~~g--~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~-~~~~~~~~~~~~G~ 269 (497)
T 2bry_A 193 QPPPRKGSGWRAQLQPNPPA--QLASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNG-RTVEETQVPEISGV 269 (497)
T ss_dssp ECCCSTTCCBEEEEESCCCH--HHHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECC-CCHHHHTSCCBCC-
T ss_pred EEecCCCCEEEEEEEECCCC--CEEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeee-ccccccchhhcCce
Confidence 874 35677776521023 1225889999999999999998887777776544322211100 00000000011111
Q ss_pred EEEEEecC-----------ceEEEEEecCCCCeEEEEe-ec----------C--CCC-C---CCCCCCHHHHH-------
Q 008258 278 LFFIFNTE-----------AIGVLVAHDLKEGEFILQV-PF----------Y--PPQ-Q---NLEDFSPEICE------- 322 (572)
Q Consensus 278 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~----------~--~~~-~---~~~~~~~~~~~------- 322 (572)
.+ .+++. ....++..+. +.+.+.. +. . .+. . .....+.+.+.
T Consensus 270 ~~-~~~~~~f~~~~~~~Gi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 346 (497)
T 2bry_A 270 AR-IYNQKFFQSLLKATGIDLENIVYYKD--ETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAA 346 (497)
T ss_dssp ----CCSSHHHHHHHHHCCCEEEEEEEES--SEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHH
T ss_pred EE-ecChhhhHhHHhhcCCCcccccccCC--CeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhcccc
Confidence 11 11100 0010111111 1111111 10 0 000 0 00112322211
Q ss_pred HHHH-----------HHhCCCCCce-eEEEecCccccceecccccccCCc-EEEEecccc-cCCCCCCCCchhHHHHHHH
Q 008258 323 KLIF-----------KLVGWELSDI-DVIDIKPWVMHAEVAEKFLCCYNQ-IILAGDACH-RFPPAGGFGMNTGVQDAHN 388 (572)
Q Consensus 323 ~~l~-----------~~~~~~~~~~-~i~~~~~w~~~~~~a~~~~~~~gr-V~LiGDAAH-~~~P~~G~G~n~ai~DA~~ 388 (572)
++-. ..++.+...+ ++.....|++..+++++|. +|| |+|+||||| .++| .|||+|+||+||.+
T Consensus 347 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~a~~~~--~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~ 423 (497)
T 2bry_A 347 DFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHG--ARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFD 423 (497)
T ss_dssp HHHTTTTTCSCCBCBCTTSSBCEEEEECSEEEEESCSEEEEEETT--EEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHH
T ss_pred ccchhhccccchhhhhccCCCCCceeeeEEEEecchhhHHHHhcC--CcccceEeccccccCcCc-cccchhhHHHHHHH
Confidence 1111 1111111112 3445668899999999998 588 999999999 5666 99999999999999
Q ss_pred HHHHHHHHhcCCCchhhHhhHHHhhhHHHHHh
Q 008258 389 LAWKIASVLKDIAPASILNTYETERKPIAEFN 420 (572)
Q Consensus 389 La~~La~~~~g~~~~~~L~~Y~~eR~~~a~~~ 420 (572)
|+|+|+.+++|.+..++| .||+++++.+
T Consensus 424 l~~~l~~~~~g~~~~~~l----~~r~~~~~~l 451 (497)
T 2bry_A 424 AAWMVKRWAEGAGPLEVL----AERESLYQLL 451 (497)
T ss_dssp HHHHHHHHHTTCCHHHHH----HHHHHHHTTG
T ss_pred HHHHHHHHhCCCCccchh----hhHHHHhhhh
Confidence 999999999998888888 9999987643
No 29
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=7.9e-27 Score=248.10 Aligned_cols=321 Identities=13% Similarity=0.027 Sum_probs=168.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC-C---CeeeeChhHHHHHHhhcchHHHHHhcCCCccccc
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH-P---QAHFINNRYALVFRKLDGLAEEIERSQPPVDLWR 116 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~-~---~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~ 116 (572)
.+..||+||||||+||++|+.|+++|++|+||||++.+... + ....+...+++.++.+ |+.. ......+.....
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~l-g~~~-~~~~~~~~~~~~ 97 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVAL-DVNE-WPSEEFGYFGHY 97 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHT-TCCC-SCHHHHCEEEEE
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhc-Chhh-hhhhccccccee
Confidence 34579999999999999999999999999999998733211 1 1233456778887777 5411 000001111100
Q ss_pred ceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEecc-
Q 008258 117 KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH- 195 (572)
Q Consensus 117 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~- 195 (572)
.... ....+ ++.... ......+++..+.+.|.+.+.+.|+ ++++..
T Consensus 98 --~~~~--~~~~~---------~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv-------------------~v~~~~v 144 (430)
T 3ihm_A 98 --YYVG--GPQPM---------RFYGDL-KAPSRAVDYRLYQPMLMRALEARGG-------------------KFCYDAV 144 (430)
T ss_dssp --EEEC--SSSCE---------EEEEEE-EEEEBEECHHHHHHHHHHHHHHTTC-------------------EEEECCC
T ss_pred --EEEC--CCCcc---------ccchhc-CCcceeecHHHHHHHHHHHHHHcCC-------------------EEEEEec
Confidence 0100 11001 110000 1122567888999999999998887 333311
Q ss_pred EEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCC-ccccccCc-ceEEEEEEecCccccccccC
Q 008258 196 ECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGI-DLVGEKDL-QKLVSVHFLSKDLGDYLLNE 273 (572)
Q Consensus 196 ~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~-~~~g~~~~-~~~~~~~~~~~~l~~~~~~~ 273 (572)
++.++++ ...++|+||+|||.+|.+|..... ........ +......+.. .. ..
T Consensus 145 ~~~~l~~-------------------~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g--~~---~~- 199 (430)
T 3ihm_A 145 SAEDLEG-------------------LSEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKG--IK---EA- 199 (430)
T ss_dssp CGGGHHH-------------------HHTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEES--BC---CC-
T ss_pred chhhhhh-------------------hcccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEcc--CC---CC-
Confidence 0011100 012489999999999988743211 11111111 1222222211 11 01
Q ss_pred CCceEEEEEecCc-eEEEEEecCCCCeEE--EEeecCCCC-CCCCC----CCHHHH----HHHHHHHhCC------CCC-
Q 008258 274 RPGMLFFIFNTEA-IGVLVAHDLKEGEFI--LQVPFYPPQ-QNLED----FSPEIC----EKLIFKLVGW------ELS- 334 (572)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~----~~~~~~----~~~l~~~~~~------~~~- 334 (572)
.+....+.+.++. ..++++.....+... +..+..... +.... -+++.. .+.+....++ ...
T Consensus 200 ~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (430)
T 3ihm_A 200 PIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEF 279 (430)
T ss_dssp SSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTC
T ss_pred CcCeeeeeecCCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchh
Confidence 1222223333332 222222211112222 112211110 11111 144432 3333332211 001
Q ss_pred -----ceeEEEecCccccceecccccccCCcEEE-EecccccCCCCCCCCchhHHHHHHHHHHHHHHHhcCCCchhhHhh
Q 008258 335 -----DIDVIDIKPWVMHAEVAEKFLCCYNQIIL-AGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNT 408 (572)
Q Consensus 335 -----~~~i~~~~~w~~~~~~a~~~~~~~grV~L-iGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~g~~~~~~L~~ 408 (572)
...+.....|+.......+|. .||++| +|||||.++|++|||+|+||+||.+|+|+|+.. + ..+.+|.+
T Consensus 280 ~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~--~-~~~~~~~~ 354 (430)
T 3ihm_A 280 DLANSSLDILQGGVVPAFRDGHATLN--NGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH--S-VYDLRFSE 354 (430)
T ss_dssp EESSSTTSEEEECCCCEEBCSEEECT--TSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC--S-CCSHHHHH
T ss_pred ccccCccceeecceeecccccccccC--CCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc--C-CHHHHHHH
Confidence 112222234554444556675 588888 999999999999999999999999999999974 3 36789999
Q ss_pred HHHhhh-HHHHHhHHHHHH
Q 008258 409 YETERK-PIAEFNTALSVQ 426 (572)
Q Consensus 409 Y~~eR~-~~a~~~~~~s~~ 426 (572)
|+.+|+ ++++..++++..
T Consensus 355 ~~~~r~~~~~~~~~~~~~~ 373 (430)
T 3ihm_A 355 HLERRRQDRVLCATRWTNF 373 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 999999 666666665543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.77 E-value=2.2e-17 Score=168.80 Aligned_cols=292 Identities=16% Similarity=0.207 Sum_probs=144.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCC------------eeeeC---hhHHHHHHhhcchHHHHHhc
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ------------AHFIN---NRYALVFRKLDGLAEEIERS 108 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~------------a~~l~---~rt~e~l~~l~Gl~~~l~~~ 108 (572)
+||+||||||+|+++|+.|++.|++|+||||.+.+..... ...+. +...+.++.+ ...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 75 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQW-------QAQ 75 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHH-------HHH
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHH-------HhC
Confidence 6999999999999999999999999999999875521111 11122 2222333222 111
Q ss_pred CCCcccccc-eeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccc
Q 008258 109 QPPVDLWRK-FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQ 187 (572)
Q Consensus 109 ~~~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~ 187 (572)
.. ...|.. +... ..+. + .... ..+. ....+..+.. |.+.+.+ |+
T Consensus 76 ~~-~~~~~~~~~~~--~~~~-~------~~~~----~~~~--~~~~~~~~~~-l~~~l~~-g~----------------- 120 (336)
T 1yvv_A 76 GH-VAEWTPLLYNF--HAGR-L------SPSP----DEQV--RWVGKPGMSA-ITRAMRG-DM----------------- 120 (336)
T ss_dssp TS-EEEECCCEEEE--SSSB-C------CCCC----TTSC--EEEESSCTHH-HHHHHHT-TC-----------------
T ss_pred CC-eeeccccceec--cCcc-c------ccCC----CCCc--cEEcCccHHH-HHHHHHc-cC-----------------
Confidence 11 111111 1110 0110 0 0000 0000 0111222333 3333333 54
Q ss_pred cceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCcc----ccccCcceEEEEEEec
Q 008258 188 GREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDL----VGEKDLQKLVSVHFLS 263 (572)
Q Consensus 188 ~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~~----~g~~~~~~~~~~~~~~ 263 (572)
+|+++++|++++++++++++++. +|+ ...++|+||+|||++|.+|...+.+. .....+.....+.+..
T Consensus 121 --~i~~~~~v~~i~~~~~~~~v~~~---~g~---~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 192 (336)
T 1yvv_A 121 --PVSFSCRITEVFRGEEHWNLLDA---EGQ---NHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAF 192 (336)
T ss_dssp --CEECSCCEEEEEECSSCEEEEET---TSC---EEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEE
T ss_pred --cEEecCEEEEEEEeCCEEEEEeC---CCc---CccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEe
Confidence 89999999999999999887753 553 23469999999999999886533220 0111222222222221
Q ss_pred CccccccccCCCceEEEEEecCceEEEEEec---CCCC---eEEEEeecCCCCCCCCCCCHHHHHHHH----HHHhCCCC
Q 008258 264 KDLGDYLLNERPGMLFFIFNTEAIGVLVAHD---LKEG---EFILQVPFYPPQQNLEDFSPEICEKLI----FKLVGWEL 333 (572)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~ 333 (572)
+.- . ..+...++ ...+..+++.... ...+ .+++..+-.. .....+.+++.+.+.+ .+.+|...
T Consensus 193 ~~~--~---~~~~~~~~-~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~lg~~~ 265 (336)
T 1yvv_A 193 ETP--L---QTPMQGCF-VQDSPLDWLARNRSKPERDDTLDTWILHATSQW-SRQNLDASREQVIEHLHGAFAELIDCTM 265 (336)
T ss_dssp SSC--C---SCCCCEEE-ECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHH-HHHTTTSCHHHHHHHHHHHHHTTCSSCC
T ss_pred cCC--C---CCCCCeEE-eCCCceeEEEecCcCCCCCCCCcEEEEEeCHHH-HHHHHhCCHHHHHHHHHHHHHHHhCCCC
Confidence 110 0 01111111 1222233333221 1112 3555442100 0112344555444433 33445322
Q ss_pred CceeEEEecCcccc----ceecccccccCCcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHhc
Q 008258 334 SDIDVIDIKPWVMH----AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK 398 (572)
Q Consensus 334 ~~~~i~~~~~w~~~----~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~~ 398 (572)
..........|... ......+....+|++|+|||+| |.|+|.|+.|+..||..|...+.
T Consensus 266 ~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~------g~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 266 PAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp CCCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHhh
Confidence 22222333445321 1111111112489999999997 44999999999999888887654
No 31
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.65 E-value=2e-15 Score=158.34 Aligned_cols=216 Identities=9% Similarity=0.109 Sum_probs=118.1
Q ss_pred cChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEE
Q 008258 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILI 230 (572)
Q Consensus 152 l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vV 230 (572)
++...+...|.+.+.+.|+ +++++++|++++.+++.+. +++ ++| +++||.||
T Consensus 171 ~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~~v~~---~~g-----~~~a~~vV 223 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGV-------------------DIIQNCEVTGFIKDGEKVTGVKT---TRG-----TIHAGKVA 223 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEEEEEE---TTC-----CEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCC-------------------EEEcCCeEEEEEEeCCEEEEEEe---CCc-----eEECCEEE
Confidence 4445788889999988887 8899999999988766543 332 244 48899999
Q ss_pred eecCCCh-hhhhhcCCccccccCcceEEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCCCCeEEEEeecCCC
Q 008258 231 GTDGAGS-TVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPP 309 (572)
Q Consensus 231 gADG~~S-~VR~~lg~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (572)
.|+|++| .+++.+|+...........+... .+... .+.. +++++...++.+. ..+.+.+.....+.
T Consensus 224 ~a~G~~s~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~----~~~~---~~~~~~~~y~~p~--~~g~~~ig~~~~~~ 290 (405)
T 2gag_B 224 LAGAGHSSVLAEMAGFELPIQSHPLQALVSE----LFEPV----HPTV---VMSNHIHVYVSQA--HKGELVMGAGIDSY 290 (405)
T ss_dssp ECCGGGHHHHHHHHTCCCCEEEEEEEEEEEE----EBCSC----CCSE---EEETTTTEEEEEC--TTSEEEEEEEECSS
T ss_pred ECCchhHHHHHHHcCCCCCccccceeEEEec----CCccc----cCce---EEeCCCcEEEEEc--CCCcEEEEeccCCC
Confidence 9999998 68888876543322222222111 11110 0111 1222222222221 23555554332211
Q ss_pred CCCCCCCCHH---HHHHHHHHHhCCCCCceeEEEecCccccceecccccccCCcEEEEecccccCCCCCCCCch-hHHHH
Q 008258 310 QQNLEDFSPE---ICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMN-TGVQD 385 (572)
Q Consensus 310 ~~~~~~~~~~---~~~~~l~~~~~~~~~~~~i~~~~~w~~~~~~a~~~~~~~grV~LiGDAAH~~~P~~G~G~n-~ai~D 385 (572)
.......+++ .+.+.+.+++.. ....++. ..|.-. ..+. .++..++|++. .-.-+...|++ .|+.+
T Consensus 291 ~~~~~~~~~~~~~~l~~~~~~~~p~-l~~~~~~--~~w~g~----~~~t--~d~~p~ig~~~-~~~l~~~~G~~g~G~~~ 360 (405)
T 2gag_B 291 NGYGQRGAFHVIQEQMAAAVELFPI-FARAHVL--RTWGGI----VDTT--MDASPIISKTP-IQNLYVNCGWGTGGFKG 360 (405)
T ss_dssp CCCSSCCCTHHHHHHHHHHHHHCGG-GGGCEEC--EEEEEE----EEEE--TTSCCEEEECS-SBTEEEEECCGGGCSTT
T ss_pred CccccCCCHHHHHHHHHHHHHhCCc-cccCCcc--eEEeec----cccC--CCCCCEecccC-CCCEEEEecCCCchhhH
Confidence 1111122222 333444444431 1122222 234211 1112 47888999965 11112334555 68888
Q ss_pred HHHHHHHHHHHhcCCCchhhHhhHHHhhhHHH
Q 008258 386 AHNLAWKIASVLKDIAPASILNTYETERKPIA 417 (572)
Q Consensus 386 A~~La~~La~~~~g~~~~~~L~~Y~~eR~~~a 417 (572)
|.++||+|+..+.+...+..++.|+.+|.+..
T Consensus 361 a~~~g~~la~~i~g~~~~~~~~~~~~~R~~~~ 392 (405)
T 2gag_B 361 TPGAGFTLAHTIANDEPHELNKPFSLERFETG 392 (405)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTTSCSTHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCccccccCcchhcCC
Confidence 88999999988876656668899999997653
No 32
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.59 E-value=1.3e-14 Score=142.00 Aligned_cols=36 Identities=31% Similarity=0.550 Sum_probs=34.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.+||+|||||||||++|+.|+++|++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 389999999999999999999999999999998766
No 33
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.55 E-value=4e-14 Score=147.27 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=54.7
Q ss_pred cccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEE
Q 008258 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (572)
Q Consensus 150 ~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~v 229 (572)
..+....+...|.+.+.+.|+ +++++++|++++.+++++.++.. +| +++||.|
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~v~~~---~g-----~~~a~~v 211 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGA-------------------EIFEHTPVLHVERDGEALFIKTP---SG-----DVWANHV 211 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTC-------------------EEETTCCCCEEECSSSSEEEEET---TE-----EEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCC-------------------EEEcCCcEEEEEEECCEEEEEcC---Cc-----eEEcCEE
Confidence 345567788899999988887 88889999999887777755432 33 5899999
Q ss_pred EeecCCChh-hhhhcCCc
Q 008258 230 IGTDGAGST-VRKLVGID 246 (572)
Q Consensus 230 VgADG~~S~-VR~~lg~~ 246 (572)
|.|+|..|. +.+.++..
T Consensus 212 V~A~G~~s~~l~~~~~~~ 229 (382)
T 1ryi_A 212 VVASGVWSGMFFKQLGLN 229 (382)
T ss_dssp EECCGGGTHHHHHHTTCC
T ss_pred EECCChhHHHHHHhcCCC
Confidence 999999987 77777653
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.54 E-value=7.5e-14 Score=145.29 Aligned_cols=69 Identities=14% Similarity=0.231 Sum_probs=54.1
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~v 229 (572)
.++...+.+.|.+.+.+.|+ +++++++|++++.++++++ |+.. +| +++||.|
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~v~gv~~~---~g-----~i~a~~V 197 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGA-------------------KLLEYTEVKGFLIENNEIKGVKTN---KG-----IIKTGIV 197 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEEEEEET---TE-----EEECSEE
T ss_pred eECHHHHHHHHHHHHHHCCC-------------------EEECCceEEEEEEECCEEEEEEEC---Cc-----EEECCEE
Confidence 35567788889999988887 8899999999998877766 5432 33 5899999
Q ss_pred EeecCCCh-hhhhhcCCc
Q 008258 230 IGTDGAGS-TVRKLVGID 246 (572)
Q Consensus 230 VgADG~~S-~VR~~lg~~ 246 (572)
|.|+|..| .+.+.+|..
T Consensus 198 V~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 198 VNATNAWANLINAMAGIK 215 (382)
T ss_dssp EECCGGGHHHHHHHHTCC
T ss_pred EECcchhHHHHHHHcCCC
Confidence 99999998 467766654
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.44 E-value=4.1e-12 Score=132.86 Aligned_cols=66 Identities=9% Similarity=0.112 Sum_probs=52.0
Q ss_pred ChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEee
Q 008258 153 SQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGT 232 (572)
Q Consensus 153 ~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgA 232 (572)
....+...|.+.+.+.|+ +++++++|++++.++++++|+. +++ +++||.||.|
T Consensus 151 ~~~~~~~~l~~~a~~~Gv-------------------~i~~~~~V~~i~~~~~~v~v~t---~~g-----~i~a~~VV~A 203 (397)
T 2oln_A 151 DVRGTLAALFTLAQAAGA-------------------TLRAGETVTELVPDADGVSVTT---DRG-----TYRAGKVVLA 203 (397)
T ss_dssp EHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEETTEEEEEE---SSC-----EEEEEEEEEC
T ss_pred cHHHHHHHHHHHHHHcCC-------------------EEECCCEEEEEEEcCCeEEEEE---CCC-----EEEcCEEEEc
Confidence 345677888888888887 8999999999998888876543 233 5899999999
Q ss_pred cCCCh-hhhhhcCC
Q 008258 233 DGAGS-TVRKLVGI 245 (572)
Q Consensus 233 DG~~S-~VR~~lg~ 245 (572)
+|++| .+++.+|.
T Consensus 204 ~G~~s~~l~~~~g~ 217 (397)
T 2oln_A 204 CGPYTNDLLEPLGA 217 (397)
T ss_dssp CGGGHHHHHGGGTC
T ss_pred CCcChHHHhhhcCC
Confidence 99984 57777774
No 36
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.43 E-value=3e-12 Score=133.33 Aligned_cols=173 Identities=14% Similarity=0.203 Sum_probs=96.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC--CC--CCeeeeCh------hHHHH-HHhhcchHHHHHhc-CC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS--TH--PQAHFINN------RYALV-FRKLDGLAEEIERS-QP 110 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~--~~--~~a~~l~~------rt~e~-l~~l~Gl~~~l~~~-~~ 110 (572)
++||+|||||++|+++|+.|+++|++|+||||..... .. ..+..+.+ ...++ .+.+ .+++++.+. +.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQ-ELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHH-HHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHH-HHHHHHHHHhCC
Confidence 4799999999999999999999999999999986543 11 11112211 11111 2222 344444332 11
Q ss_pred Ccccccc-eeeeeCCC--------------CCeeeeecC---------CCcccc-ccccCCccccccChhhHHHHHHHHH
Q 008258 111 PVDLWRK-FIYCTSVT--------------GPILGSVDH---------MQPQDF-EKVVSPVSVAHFSQYKLNKLLLKQL 165 (572)
Q Consensus 111 ~~~~~~~-~~~~~~~~--------------G~~~~~~~~---------~~~~~~-~~~~sp~~~~~l~q~~L~~~L~~~~ 165 (572)
+.-.... ........ |.....++. ...... .....+. ...++...+...|.+.+
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 160 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPN-SGVLFSENCIRAYRELA 160 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETT-CEEEEHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCC-CcEEeHHHHHHHHHHHH
Confidence 1100000 00111000 100000000 000000 0000011 12334467888899999
Q ss_pred HhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh-hhhhcC
Q 008258 166 EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST-VRKLVG 244 (572)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~-VR~~lg 244 (572)
.+.|+ +++++++|++++.+++++.++.. +| +++||.||.|+|+.|. +.+.++
T Consensus 161 ~~~Gv-------------------~i~~~~~v~~i~~~~~~~~v~~~---~g-----~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 161 EARGA-------------------KVLTHTRVEDFDISPDSVKIETA---NG-----SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp HHTTC-------------------EEECSCCEEEEEECSSCEEEEET---TE-----EEEEEEEEECCGGGHHHHGGGGT
T ss_pred HHCCC-------------------EEEcCcEEEEEEecCCeEEEEeC---CC-----EEEeCEEEEecCccHHHHhhhhc
Confidence 88887 88999999999988777665432 32 5899999999999875 445555
No 37
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.43 E-value=9.2e-13 Score=138.66 Aligned_cols=144 Identities=18% Similarity=0.258 Sum_probs=90.1
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCC------CCeeeeC-------------hhHHHHHHhhc
Q 008258 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH------PQAHFIN-------------NRYALVFRKLD 99 (572)
Q Consensus 39 ~~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~------~~a~~l~-------------~rt~e~l~~l~ 99 (572)
|++.++||+||||||+|+++|+.|+++|++|+||||.+.+... ++....+ ......+..+
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~- 101 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARY- 101 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHS-
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhc-
Confidence 3456789999999999999999999999999999998865210 1111110 0011222222
Q ss_pred chH---HHHHhcCCCcccccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccC
Q 008258 100 GLA---EEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSE 176 (572)
Q Consensus 100 Gl~---~~l~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~ 176 (572)
... +.+...+.+.. ....|. .+.......+.+.|.+.+.+.|+
T Consensus 102 ~~~~~~~~~~~~Gi~~~--------~~~~g~--------------------~~~~~~~~~l~~~L~~~l~~~Gv------ 147 (417)
T 3v76_A 102 RPQDFVALVERHGIGWH--------EKTLGQ--------------------LFCDHSAKDIIRMLMAEMKEAGV------ 147 (417)
T ss_dssp CHHHHHHHHHHTTCCEE--------ECSTTE--------------------EEESSCHHHHHHHHHHHHHHHTC------
T ss_pred CHHHHHHHHHHcCCCcE--------EeeCCE--------------------EeeCCCHHHHHHHHHHHHHHCCC------
Confidence 111 11111111110 000111 11123456788889999988887
Q ss_pred CcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 177 GTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 177 ~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++++++|++++.+++++.|+.. +| +++||.||.|+|.+|.
T Consensus 148 -------------~i~~~~~V~~i~~~~~~~~V~~~---~g-----~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 148 -------------QLRLETSIGEVERTASGFRVTTS---AG-----TVDAASLVVASGGKSI 188 (417)
T ss_dssp -------------EEECSCCEEEEEEETTEEEEEET---TE-----EEEESEEEECCCCSSC
T ss_pred -------------EEEECCEEEEEEEeCCEEEEEEC---Cc-----EEEeeEEEECCCCccC
Confidence 89999999999988888766543 33 6899999999999993
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=2.4e-12 Score=132.75 Aligned_cols=72 Identities=11% Similarity=0.167 Sum_probs=56.4
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCe-EEEEEEeccCCceeeEEEEecEE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNIL 229 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~-v~v~~~~~~~g~~~~~~i~ad~v 229 (572)
.++...+...|.+.+++.|+ +++++++|++++.++++ +.|++. +|+ ..+++||.|
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~~~a~~V 201 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGA-------------------QLVFHTPLIAGRVRPEGGFELDFG---GAE--PMTLSCRVL 201 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEECTTSSEEEEEC---TTS--CEEEEEEEE
T ss_pred EECHHHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEEcCCceEEEEEC---CCc--eeEEEeCEE
Confidence 35566788899999999887 89999999999988766 666543 442 347899999
Q ss_pred EeecCCCh-hhhhhc-CCc
Q 008258 230 IGTDGAGS-TVRKLV-GID 246 (572)
Q Consensus 230 VgADG~~S-~VR~~l-g~~ 246 (572)
|.|+|++| .+.+.+ |++
T Consensus 202 V~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 202 INAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECCGGGHHHHHHTEETSC
T ss_pred EECCCcchHHHHHHhcCCC
Confidence 99999999 466777 764
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.39 E-value=5.6e-12 Score=130.67 Aligned_cols=69 Identities=19% Similarity=0.352 Sum_probs=54.0
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vV 230 (572)
.++...+...|.+.+++.|+ +++++++|++++.+++++.|+.. +| +++||.||
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv-------------------~i~~~~~V~~i~~~~~~~~V~t~---~g-----~i~a~~VV 202 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQG-------------------QVLCNHEALEIRRVDGAWEVRCD---AG-----SYRAAVLV 202 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEESSCCCCEEEEETTEEEEECS---SE-----EEEESEEE
T ss_pred eECHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEEEEEeCCeEEEEeC---CC-----EEEcCEEE
Confidence 34556788889999988887 88999999999988888655432 33 68999999
Q ss_pred eecCCChh-hhhhcCCc
Q 008258 231 GTDGAGST-VRKLVGID 246 (572)
Q Consensus 231 gADG~~S~-VR~~lg~~ 246 (572)
.|+|++|. +.+.+|..
T Consensus 203 ~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 203 NAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp ECCGGGHHHHHHHHTCC
T ss_pred ECCChhHHHHHHHhCCC
Confidence 99999984 56666653
No 40
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.38 E-value=1.3e-11 Score=114.10 Aligned_cols=118 Identities=22% Similarity=0.310 Sum_probs=86.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
+||+||||||+|+.+|..|++.|.+|+|+|+.+..... .. .+ ..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~--~~-----------~~--------------~~--------- 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKG--VS-----------RV--------------PN--------- 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTT--CS-----------CC--------------CC---------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccC--ch-----------hh--------------hc---------
Confidence 68999999999999999999999999999998632110 00 00 00
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
..+ + | ..+....+.+.|.+.+++.|+ +++++ ++++++.+
T Consensus 46 ~~~-------------~-----~---~~~~~~~~~~~l~~~~~~~gv-------------------~v~~~-~v~~i~~~ 84 (180)
T 2ywl_A 46 YPG-------------L-----L---DEPSGEELLRRLEAHARRYGA-------------------EVRPG-VVKGVRDM 84 (180)
T ss_dssp STT-------------C-----T---TCCCHHHHHHHHHHHHHHTTC-------------------EEEEC-CCCEEEEC
T ss_pred cCC-------------C-----c---CCCCHHHHHHHHHHHHHHcCC-------------------EEEeC-EEEEEEEc
Confidence 000 0 0 013456778888888888887 88888 99999887
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCc
Q 008258 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGID 246 (572)
Q Consensus 204 ~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~ 246 (572)
++++.+++. +| ++++|+||.|+|.++.+++.+|++
T Consensus 85 ~~~~~v~~~---~g-----~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 85 GGVFEVETE---EG-----VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp SSSEEEECS---SC-----EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred CCEEEEEEC---CC-----EEEECEEEECCCCCCCccccCCCC
Confidence 777666543 44 589999999999999887777653
No 41
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.35 E-value=4.7e-12 Score=134.81 Aligned_cols=166 Identities=18% Similarity=0.240 Sum_probs=92.3
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC------CCCeeeeChhHH-HHHHhhc---c-hHHHHHhc
Q 008258 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST------HPQAHFINNRYA-LVFRKLD---G-LAEEIERS 108 (572)
Q Consensus 40 ~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~------~~~a~~l~~rt~-e~l~~l~---G-l~~~l~~~ 108 (572)
..+++||+|||||++|+++|+.|++.|.+|+||||.+.+.. .++....+.... ++++.++ . +...+...
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 34568999999999999999999999999999999875421 001111111001 1111110 0 00000000
Q ss_pred CCCcccccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCccccccccccc
Q 008258 109 QPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQG 188 (572)
Q Consensus 109 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~ 188 (572)
. +.+.. .+.. ..|-.+... .... .-| ..-....+.+.|.+.+.+.|+
T Consensus 103 ~-~~~~~---~~~~-~~G~~~~~~------~~g~-~~p---~~~~~~~l~~~L~~~~~~~GV------------------ 149 (447)
T 2i0z_A 103 N-NEDII---TFFE-NLGVKLKEE------DHGR-MFP---VSNKAQSVVDALLTRLKDLGV------------------ 149 (447)
T ss_dssp C-HHHHH---HHHH-HTTCCEEEC------GGGE-EEE---TTCCHHHHHHHHHHHHHHTTC------------------
T ss_pred C-HHHHH---HHHH-hcCCceEEe------eCCE-EEC---CCCCHHHHHHHHHHHHHHCCC------------------
Confidence 0 00000 0000 001000000 0000 000 001245777888899988887
Q ss_pred ceEEeccEEEEEeeeCCe-EEEEEEeccCCceeeEEEEecEEEeecCCCh-----------hhhhhcCCc
Q 008258 189 REILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS-----------TVRKLVGID 246 (572)
Q Consensus 189 ~~i~~g~~v~~v~~~~~~-v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S-----------~VR~~lg~~ 246 (572)
+++++++|+++..+++. +.|++. +|+ +++||.||.|+|..| .+++++|..
T Consensus 150 -~i~~~~~V~~i~~~~~~v~~V~~~---~G~----~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 150 -KIRTNTPVETIEYENGQTKAVILQ---TGE----VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp -EEECSCCEEEEEEETTEEEEEEET---TCC----EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred -EEEeCcEEEEEEecCCcEEEEEEC---CCC----EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 89999999999877776 444442 453 589999999999999 677777654
No 42
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.32 E-value=2.1e-11 Score=121.73 Aligned_cols=143 Identities=14% Similarity=0.222 Sum_probs=91.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCCCCC--C-----CeeeeChhHHHHHHhhcchHHHHHhcCCCcc
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTH--P-----QAHFINNRYALVFRKLDGLAEEIERSQPPVD 113 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~-Gi~v~viEr~~~~~~~--~-----~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~ 113 (572)
.++||+||||||+|+++|+.|+++ |++|+||||.+.+... . ....+...+.+.|+.+ |+ +..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~-G~---------~~~ 107 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI-GV---------AYD 107 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH-TC---------CCE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc-CC---------Ccc
Confidence 457999999999999999999998 9999999998765311 0 1122223334444443 32 110
Q ss_pred cccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHh-cCceeeccCCcccccccccccceEE
Q 008258 114 LWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREIL 192 (572)
Q Consensus 114 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~ 192 (572)
. .+.. .....+..+...|.+.+.+ .|+ +++
T Consensus 108 ~----------~~~~--------------------~~~~~~~~~~~~l~~~~~~~~gv-------------------~i~ 138 (284)
T 1rp0_A 108 E----------QDTY--------------------VVVKHAALFTSTIMSKLLARPNV-------------------KLF 138 (284)
T ss_dssp E----------CSSE--------------------EEESCHHHHHHHHHHHHHTSTTE-------------------EEE
T ss_pred c----------CCCE--------------------EEecCHHHHHHHHHHHHHhcCCC-------------------EEE
Confidence 0 0100 0112345677777787765 465 899
Q ss_pred eccEEEEEeeeCCeEE-EEEEec----c--CC-ceeeEEEEecEEEeecCCChhhhhhc
Q 008258 193 MGHECVSVSATDQCIN-VIASFL----K--EG-KCTERNIQCNILIGTDGAGSTVRKLV 243 (572)
Q Consensus 193 ~g~~v~~v~~~~~~v~-v~~~~~----~--~g-~~~~~~i~ad~vVgADG~~S~VR~~l 243 (572)
++++++++..+++.+. +++... + ++ ..+..+++||+||.|+|.+|.++...
T Consensus 139 ~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 139 NAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp ETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 9999999998777552 333210 1 11 11235799999999999999887653
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.32 E-value=1.8e-11 Score=137.20 Aligned_cols=70 Identities=10% Similarity=0.181 Sum_probs=54.4
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vV 230 (572)
.+....+...|.+.+.+.|+ +|+++++|++++.+++++.|+.. +|. +++||.||
T Consensus 413 ~v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~----~i~Ad~VV 466 (676)
T 3ps9_A 413 WLCPAELTRNVLELAQQQGL-------------------QIYYQYQLQNFSRKDDCWLLNFA---GDQ----QATHSVVV 466 (676)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEETTEEEEEET---TSC----EEEESEEE
T ss_pred eeCHHHHHHHHHHHHHhCCC-------------------EEEeCCeeeEEEEeCCeEEEEEC---CCC----EEECCEEE
Confidence 34556788889999988887 89999999999998888766543 443 58999999
Q ss_pred eecCCChh-hhhhcCCc
Q 008258 231 GTDGAGST-VRKLVGID 246 (572)
Q Consensus 231 gADG~~S~-VR~~lg~~ 246 (572)
.|+|..|. +.+..+++
T Consensus 467 lAtG~~s~~l~~~~~lp 483 (676)
T 3ps9_A 467 LANGHQISRFSQTSTLP 483 (676)
T ss_dssp ECCGGGGGCSTTTTTCS
T ss_pred ECCCcchhccccccCCc
Confidence 99999986 44444443
No 44
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.32 E-value=8.7e-10 Score=118.98 Aligned_cols=73 Identities=14% Similarity=0.038 Sum_probs=56.4
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vV 230 (572)
.++...+...|.+.+.+.|+ +++.+++|++++.+++.+.|++.+..+| ++.+++||.||
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv-------------------~i~~~~~V~~l~~~~~~~~V~~~d~~~G--~~~~i~A~~VV 203 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGG-------------------EVLTRTRATSARRENGLWIVEAEDIDTG--KKYSWQARGLV 203 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEEETTEEEEEEEETTTC--CEEEEEESCEE
T ss_pred EEcHHHHHHHHHHHHHHcCC-------------------EEEcCcEEEEEEEeCCEEEEEEEECCCC--CEEEEECCEEE
Confidence 35677888899999999887 8899999999998776666766532234 34579999999
Q ss_pred eecCCChh-hhhh-cC
Q 008258 231 GTDGAGST-VRKL-VG 244 (572)
Q Consensus 231 gADG~~S~-VR~~-lg 244 (572)
.|+|.+|. +++. ++
T Consensus 204 ~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 204 NATGPWVKQFFDDGMH 219 (501)
T ss_dssp ECCGGGHHHHHHHHTC
T ss_pred ECCChhHHHHHHHhcc
Confidence 99999986 4554 54
No 45
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.31 E-value=1.7e-10 Score=126.11 Aligned_cols=75 Identities=15% Similarity=0.037 Sum_probs=58.9
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~v 229 (572)
.++...|...|.+.+.+.|+ +++++++|+++..+++++. |++.+..+| +..+++||.|
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~-------------------~i~~~~~V~~l~~~~g~v~gV~~~d~~tg--~~~~i~A~~V 224 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGA-------------------VALNYMKVESFIYDQGKVVGVVAKDRLTD--TTHTIYAKKV 224 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEEETTEEEEEEEEETTTC--CEEEEEEEEE
T ss_pred eEcHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEEEcCCeEEEEEEEEcCCC--ceEEEECCEE
Confidence 45667888889999989887 8999999999998887754 666532233 3457999999
Q ss_pred EeecCCCh-hhhhhcCCc
Q 008258 230 IGTDGAGS-TVRKLVGID 246 (572)
Q Consensus 230 VgADG~~S-~VR~~lg~~ 246 (572)
|.|+|..| .+++.+|..
T Consensus 225 V~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 225 VNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp EECCGGGHHHHHHTTTCC
T ss_pred EECCCcchHHHHHhcCCC
Confidence 99999999 578777654
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.29 E-value=2.3e-11 Score=136.41 Aligned_cols=70 Identities=10% Similarity=0.068 Sum_probs=52.8
Q ss_pred cChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEe
Q 008258 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIG 231 (572)
Q Consensus 152 l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVg 231 (572)
++...+...|.+.+.+.|+ +|+++++|++++.+++++.|+.. +|. .+++||.||.
T Consensus 409 v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~---~~i~Ad~VVl 463 (689)
T 3pvc_A 409 LCPSDLTHALMMLAQQNGM-------------------TCHYQHELQRLKRIDSQWQLTFG---QSQ---AAKHHATVIL 463 (689)
T ss_dssp ECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEECSSSEEEEEC----CC---CCEEESEEEE
T ss_pred ECHHHHHHHHHHHHHhCCC-------------------EEEeCCeEeEEEEeCCeEEEEeC---CCc---EEEECCEEEE
Confidence 4456788889999988887 89999999999998888766553 331 1478999999
Q ss_pred ecCCChh-hhhhcCCc
Q 008258 232 TDGAGST-VRKLVGID 246 (572)
Q Consensus 232 ADG~~S~-VR~~lg~~ 246 (572)
|+|..|. +.+.++++
T Consensus 464 AtG~~s~~l~~~~~lp 479 (689)
T 3pvc_A 464 ATGHRLPEWEQTHHLP 479 (689)
T ss_dssp CCGGGTTCSTTTTTSC
T ss_pred CCCcchhccccccCCc
Confidence 9999985 44444443
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.29 E-value=8.5e-12 Score=135.07 Aligned_cols=68 Identities=16% Similarity=0.178 Sum_probs=51.4
Q ss_pred hhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEEeec
Q 008258 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTD 233 (572)
Q Consensus 155 ~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgAD 233 (572)
..+.+.|.+.+.+.|+ +++++++|++++.+++.+. |++. +|+ +++||+||.||
T Consensus 220 ~~l~~~L~~~l~~~Gv-------------------~I~~~t~V~~I~~~~~~v~gV~l~---~G~----~i~Ad~VVlA~ 273 (549)
T 3nlc_A 220 VTMIEKMRATIIELGG-------------------EIRFSTRVDDLHMEDGQITGVTLS---NGE----EIKSRHVVLAV 273 (549)
T ss_dssp HHHHHHHHHHHHHTTC-------------------EEESSCCEEEEEESSSBEEEEEET---TSC----EEECSCEEECC
T ss_pred HHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEEEeCCEEEEEEEC---CCC----EEECCEEEECC
Confidence 5677778888888887 8999999999998777654 4443 553 68999999999
Q ss_pred CCChh----hhhhcCCccc
Q 008258 234 GAGST----VRKLVGIDLV 248 (572)
Q Consensus 234 G~~S~----VR~~lg~~~~ 248 (572)
|.+|. ..+.+|+.+.
T Consensus 274 G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 274 GHSARDTFEMLHERGVYME 292 (549)
T ss_dssp CTTCHHHHHHHHHTTCCCE
T ss_pred CCChhhHHHHHHHcCCCcc
Confidence 99994 3445566543
No 48
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.27 E-value=4e-11 Score=121.47 Aligned_cols=143 Identities=17% Similarity=0.282 Sum_probs=91.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCC-------CCCeeeeChhHHHHHHhhcchHHHHHhcCCCc
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFST-------HPQAHFINNRYALVFRKLDGLAEEIERSQPPV 112 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~~~-------~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~ 112 (572)
.++||+||||||+||++|+.|+++ |++|+||||.+.+.. ......+.+...+.|+++ |+ +.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~-Gv---------~~ 147 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEV-GV---------PY 147 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHH-TC---------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHc-CC---------cc
Confidence 468999999999999999999998 999999999876531 112233345555666555 43 11
Q ss_pred ccccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhc-CceeeccCCcccccccccccceE
Q 008258 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (572)
Q Consensus 113 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i 191 (572)
.. .|... .......+...|.+.+.+. |+ ++
T Consensus 148 ~~----------~G~~~--------------------~~~~~~d~~~~L~~~a~~~~gV-------------------~i 178 (344)
T 3jsk_A 148 ED----------EGDYV--------------------VVKHAALFTSTVLSKVLQRPNV-------------------KL 178 (344)
T ss_dssp EE----------CSSEE--------------------EESCHHHHHHHHHHHHHTCTTE-------------------EE
T ss_pred cc----------cCCeE--------------------EEecHHHHHHHHHHHHHhCCCC-------------------EE
Confidence 00 01100 0112345667888888763 55 88
Q ss_pred EeccEEEEEeeeCC-------------------eEE-EEEEec---cCCc----eeeEEEEecEEEeecCCChhhhhhc
Q 008258 192 LMGHECVSVSATDQ-------------------CIN-VIASFL---KEGK----CTERNIQCNILIGTDGAGSTVRKLV 243 (572)
Q Consensus 192 ~~g~~v~~v~~~~~-------------------~v~-v~~~~~---~~g~----~~~~~i~ad~vVgADG~~S~VR~~l 243 (572)
+++++++++..+++ .|. |.+.+. .++. ....+++|++||+|+|..|++++.+
T Consensus 179 ~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 179 FNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred EeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 89999998876652 221 111110 1121 1345899999999999999976544
No 49
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.25 E-value=3.9e-11 Score=125.64 Aligned_cols=141 Identities=18% Similarity=0.270 Sum_probs=85.6
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCC------CCCee----------eeC--hh-HHHHHHhhc--c
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST------HPQAH----------FIN--NR-YALVFRKLD--G 100 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~------~~~a~----------~l~--~r-t~e~l~~l~--G 100 (572)
.++||+||||||+|+++|+.|+++|.+|+||||.+.+.. .++.. .+. +. ....+..+. .
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 468999999999999999999999999999999876421 00000 000 00 001111110 0
Q ss_pred hHHHHHhcCCCcccccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCccc
Q 008258 101 LAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEG 180 (572)
Q Consensus 101 l~~~l~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~ 180 (572)
+.+.+...+.+.. ....|.. + |. . ....+.+.|.+.+++.|+
T Consensus 83 ~~~~~~~~Gi~~~--------~~~~g~~-----------~-----p~---~-~~~~l~~~L~~~~~~~Gv---------- 124 (401)
T 2gqf_A 83 FISLVAEQGITYH--------EKELGQL-----------F-----CD---E-GAEQIVEMLKSECDKYGA---------- 124 (401)
T ss_dssp HHHHHHHTTCCEE--------ECSTTEE-----------E-----ET---T-CTHHHHHHHHHHHHHHTC----------
T ss_pred HHHHHHhCCCceE--------ECcCCEE-----------c-----cC---C-CHHHHHHHHHHHHHHCCC----------
Confidence 1111111111110 0000110 0 10 1 456777888888888887
Q ss_pred ccccccccceEEeccEEEEEeee----CCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 181 LHNHLLQGREILMGHECVSVSAT----DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 181 ~~~~~~~~~~i~~g~~v~~v~~~----~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
+++++++++++..+ ++++.++.. ++ +++||.||.|+|.+|
T Consensus 125 ---------~i~~~~~v~~i~~~~~g~~~~~~v~~~---~g-----~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 125 ---------KILLRSEVSQVERIQNDEKVRFVLQVN---ST-----QWQCKNLIVATGGLS 168 (401)
T ss_dssp ---------EEECSCCEEEEEECCSCSSCCEEEEET---TE-----EEEESEEEECCCCSS
T ss_pred ---------EEEeCCEEEEEEcccCcCCCeEEEEEC---CC-----EEECCEEEECCCCcc
Confidence 89999999999876 555655432 32 589999999999999
No 50
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.23 E-value=2.1e-11 Score=129.24 Aligned_cols=62 Identities=10% Similarity=0.165 Sum_probs=50.3
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEecc---EEEEEeeeCCeEE-EEEEeccCCceeeEEEEe
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH---ECVSVSATDQCIN-VIASFLKEGKCTERNIQC 226 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~---~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~a 226 (572)
.+....+...|.+.+++.|+ ++++++ +|++++.++++++ |++. +|+ +++|
T Consensus 157 ~~~~~~~~~~L~~~a~~~Gv-------------------~i~~~t~~~~V~~i~~~~~~v~gV~t~---~G~----~i~A 210 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMGV-------------------KFVTGTPQGRVVTLIFENNDVKGAVTA---DGK----IWRA 210 (438)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESTTTTCEEEEEEETTEEEEEEET---TTE----EEEC
T ss_pred EecHHHHHHHHHHHHHhcCC-------------------EEEeCCcCceEEEEEecCCeEEEEEEC---CCC----EEEC
Confidence 34455788889999998887 899999 9999998888876 5543 553 6899
Q ss_pred cEEEeecCCChh
Q 008258 227 NILIGTDGAGST 238 (572)
Q Consensus 227 d~vVgADG~~S~ 238 (572)
|.||.|+|+.|.
T Consensus 211 d~VV~AtG~~s~ 222 (438)
T 3dje_A 211 ERTFLCAGASAG 222 (438)
T ss_dssp SEEEECCGGGGG
T ss_pred CEEEECCCCChh
Confidence 999999999884
No 51
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.20 E-value=1e-10 Score=128.25 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=96.3
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC--CeeeeChhHHHHHHhhcchHH-------HHHhcCC
Q 008258 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGLAE-------EIERSQP 110 (572)
Q Consensus 40 ~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~--~a~~l~~rt~e~l~~l~Gl~~-------~l~~~~~ 110 (572)
...++||||||||++||++|+.|++.|.+|+||||.+.+.... .+..++....+..+.+ |+.+ .+.+.+.
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~~~ 196 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAH-GVEDKVEWFIEDAMKGGR 196 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHh-CCCCCHHHHHHHHHHhcC
Confidence 3456899999999999999999999999999999988653211 1111211111112222 2110 0000000
Q ss_pred Cc---ccccc--------eeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcc
Q 008258 111 PV---DLWRK--------FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTE 179 (572)
Q Consensus 111 ~~---~~~~~--------~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~ 179 (572)
.. ..... +.|... .|-.+..........+.....+. ...+....+...|.+.+.+.|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~i~~l~~-~Gv~~~~~~~~~g~~~~r~~~~~-~~~~~~~~l~~~L~~~~~~~gv--------- 265 (566)
T 1qo8_A 197 QQNDIKLVTILAEQSADGVQWLES-LGANLDDLKRSGGARVDRTHRPH-GGKSSGPEIIDTLRKAAKEQGI--------- 265 (566)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHH-TTCCCCEEECCTTCSSCCEEECS-SSSCHHHHHHHHHHHHHHHTTC---------
T ss_pred CCCCHHHHHHHHhccHHHHHHHHh-cCCccccccccCCCCCCceeecC-CCCCCHHHHHHHHHHHHHhcCC---------
Confidence 00 00000 000000 01111000000000000000000 0013356788889999988887
Q ss_pred cccccccccceEEeccEEEEEeeeC-CeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhhhc
Q 008258 180 GLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV 243 (572)
Q Consensus 180 ~~~~~~~~~~~i~~g~~v~~v~~~~-~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~l 243 (572)
+|+++++++++..++ +.|+ |++.. .+| +..+++||.||.|+|..|..|+.+
T Consensus 266 ----------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g--~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 266 ----------DTRLNSRVVKLVVNDDHSVVGAVVHG-KHT--GYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp ----------CEECSEEEEEEEECTTSBEEEEEEEE-TTT--EEEEEEEEEEEECCCCCTTCHHHH
T ss_pred ----------EEEeCCEEEEEEECCCCcEEEEEEEe-CCC--cEEEEEcCEEEEecCCcccCHHHH
Confidence 899999999998877 6554 44442 134 345799999999999999876544
No 52
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.20 E-value=3e-11 Score=126.85 Aligned_cols=70 Identities=16% Similarity=0.223 Sum_probs=49.3
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEE---------EEeeeCCeEEEEEEeccCCceee
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV---------SVSATDQCINVIASFLKEGKCTE 221 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~---------~v~~~~~~v~v~~~~~~~g~~~~ 221 (572)
.++...+...|.+.+.+.|+ +++++++|+ +++.+++.+.|+. ++|
T Consensus 168 ~v~~~~l~~~L~~~~~~~Gv-------------------~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~---~~g---- 221 (405)
T 3c4n_A 168 TYRPGSLALLAAQQAIGQGA-------------------GLLLNTRAELVPGGVRLHRLTVTNTHQIVVH---ETR---- 221 (405)
T ss_dssp EECHHHHHHHHHHHHHTTTC-------------------EEECSCEEEEETTEEEEECBCC-------CB---CCE----
T ss_pred EEcHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEeccccccccceEeeCCeEEEEE---CCc----
Confidence 45566788899999988887 888889998 8887766664322 122
Q ss_pred EEEEecEEEeecCCCh-hhhh-hcCCcc
Q 008258 222 RNIQCNILIGTDGAGS-TVRK-LVGIDL 247 (572)
Q Consensus 222 ~~i~ad~vVgADG~~S-~VR~-~lg~~~ 247 (572)
+++||.||.|+|++| .+++ .+|+..
T Consensus 222 -~i~a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 222 -QIRAGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp -EEEEEEEEECCGGGHHHHHHHHHCCCC
T ss_pred -EEECCEEEECCCccHHHHHHHhcCCCC
Confidence 689999999999999 6777 777643
No 53
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.17 E-value=5.3e-10 Score=117.77 Aligned_cols=34 Identities=35% Similarity=0.514 Sum_probs=32.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
||+|||||++||++|+.|+++|.+|+|+||.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 8999999999999999999999999999998765
No 54
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.17 E-value=6.9e-11 Score=114.20 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=85.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
++||+||||||+|+.+|+.|++.|.+|+|||+..... + ...++. ++++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~--G--~~~~~~-------~~~~--------------------- 50 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV--M--MPFLPP-------KPPF--------------------- 50 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT--T--CCSSCC-------CSCC---------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC--C--cccCcc-------cccc---------------------
Confidence 5899999999999999999999999999999974211 0 001110 0000
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhc-CceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
..+..+..++ + . ..| ++..+...|.+.+++. |+ +++ ++++++++
T Consensus 51 -~~~~~~~~~~-----d--~-~g~------~~~~~~~~l~~~~~~~~gv-------------------~i~-~~~v~~i~ 95 (232)
T 2cul_A 51 -PPGSLLERAY-----D--P-KDE------RVWAFHARAKYLLEGLRPL-------------------HLF-QATATGLL 95 (232)
T ss_dssp -CTTCHHHHHC-----C--T-TCC------CHHHHHHHHHHHHHTCTTE-------------------EEE-ECCEEEEE
T ss_pred -chhhHHhhhc-----c--C-CCC------CHHHHHHHHHHHHHcCCCc-------------------EEE-EeEEEEEE
Confidence 0000000000 0 0 011 5678888898988886 65 666 56899998
Q ss_pred eeCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhhhcCCc
Q 008258 202 ATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGID 246 (572)
Q Consensus 202 ~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg~~ 246 (572)
.+++.+. +++ ++|. +++||+||.|+|.+|..+..+|..
T Consensus 96 ~~~~~v~~v~~---~~g~----~i~a~~VV~A~G~~s~~~~~~G~~ 134 (232)
T 2cul_A 96 LEGNRVVGVRT---WEGP----PARGEKVVLAVGSFLGARLFLGGV 134 (232)
T ss_dssp EETTEEEEEEE---TTSC----CEECSEEEECCTTCSSCEEEETTE
T ss_pred EeCCEEEEEEE---CCCC----EEECCEEEECCCCChhhceecCCc
Confidence 8777653 333 2453 589999999999999888777654
No 55
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.17 E-value=2.7e-10 Score=125.06 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=93.3
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC--CeeeeChhHHHHHHhhcchHHH-------HHhcCC
Q 008258 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGLAEE-------IERSQP 110 (572)
Q Consensus 40 ~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~--~a~~l~~rt~e~l~~l~Gl~~~-------l~~~~~ 110 (572)
...++||||||||++||++|+.|++.|.+|+||||.+.+.... .+..++....+..+.+ |+.+. ....+.
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~g~ 201 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAK-KITDSPELMFEDTMKGGQ 201 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHh-CCCCCHHHHHHHHHHhcC
Confidence 3456899999999999999999999999999999987653211 0111111111112222 21100 000000
Q ss_pred ---Ccccccc--------eeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcc
Q 008258 111 ---PVDLWRK--------FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTE 179 (572)
Q Consensus 111 ---~~~~~~~--------~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~ 179 (572)
..+.... ..|... .|-.+..........+.....+.. .......+...|.+.+.+.|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~g~~~~r~~~~~~-g~~~g~~l~~~L~~~~~~~gv--------- 270 (571)
T 1y0p_A 202 NINDPALVKVLSSHSKDSVDWMTA-MGADLTDVGMMGGASVNRAHRPTG-GAGVGAHVVQVLYDNAVKRNI--------- 270 (571)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHH-TTCCCCEEECCTTCSSCCEEESTT-TCCHHHHHHHHHHHHHHHTTC---------
T ss_pred CCCCHHHHHHHHHccHHHHHHHHh-cCCCCccCcccCCcCCCeeEecCC-CCCCHHHHHHHHHHHHHhcCC---------
Confidence 0000000 000000 011010000000000000000000 012235778889999988887
Q ss_pred cccccccccceEEeccEEEEEeeeC-CeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhh
Q 008258 180 GLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRK 241 (572)
Q Consensus 180 ~~~~~~~~~~~i~~g~~v~~v~~~~-~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~ 241 (572)
+|+++++|+++..++ +.|+ |++.. .+| +..+++||.||.|+|..|..++
T Consensus 271 ----------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g--~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 271 ----------DLRMNTRGIEVLKDDKGTVKGILVKG-MYK--GYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp ----------EEESSEEEEEEEECTTSCEEEEEEEE-TTT--EEEEEECSEEEECCCCCTTCHH
T ss_pred ----------EEEeCCEeeEeEEcCCCeEEEEEEEe-CCC--cEEEEECCeEEEeCCCcccCHH
Confidence 899999999998876 5544 44442 134 3457999999999999987554
No 56
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.15 E-value=2.8e-10 Score=117.66 Aligned_cols=60 Identities=12% Similarity=0.135 Sum_probs=47.4
Q ss_pred cChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEe
Q 008258 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIG 231 (572)
Q Consensus 152 l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVg 231 (572)
++...+.+.|.+.+.+.|+ +++++++|++++.+++++.++.. +| +++||.||.
T Consensus 146 ~~~~~l~~~l~~~~~~~G~-------------------~i~~~~~V~~i~~~~~~~~v~~~---~g-----~~~a~~vV~ 198 (372)
T 2uzz_A 146 LRSELAIKTWIQLAKEAGC-------------------AQLFNCPVTAIRHDDDGVTIETA---DG-----EYQAKKAIV 198 (372)
T ss_dssp EEHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEECSSSEEEEES---SC-----EEEEEEEEE
T ss_pred EcHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEEEEEcCCEEEEEEC---CC-----eEEcCEEEE
Confidence 3345777888888888887 88999999999988777665442 44 489999999
Q ss_pred ecCCChh
Q 008258 232 TDGAGST 238 (572)
Q Consensus 232 ADG~~S~ 238 (572)
|+|+.|.
T Consensus 199 a~G~~s~ 205 (372)
T 2uzz_A 199 CAGTWVK 205 (372)
T ss_dssp CCGGGGG
T ss_pred cCCccHH
Confidence 9999873
No 57
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.14 E-value=4.8e-10 Score=114.67 Aligned_cols=35 Identities=34% Similarity=0.415 Sum_probs=32.5
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~---~Gi~v~viEr~~~~ 78 (572)
.||+|||||++||++|+.|++ .|++|+||||.+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 489999999999999999999 99999999998654
No 58
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.14 E-value=2.4e-10 Score=116.27 Aligned_cols=126 Identities=21% Similarity=0.299 Sum_probs=85.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+||||||+|+++|+.|++.|++|+|||+.+.+. |.+... .|...
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~~----~~~~~------ 52 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG--------------------GQLTAL----YPEKY------ 52 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC--------------------HHHHHT----CTTSE------
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC--------------------Ceeecc----CCCce------
Confidence 446899999999999999999999999999999986542 111100 11100
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
+... +. ...+....+...|.+.+.+.++ +++++++|+++
T Consensus 53 --------~~~~-------------~~-~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i 91 (335)
T 2zbw_A 53 --------IYDV-------------AG-FPKVYAKDLVKGLVEQVAPFNP-------------------VYSLGERAETL 91 (335)
T ss_dssp --------ECCS-------------TT-CSSEEHHHHHHHHHHHHGGGCC-------------------EEEESCCEEEE
T ss_pred --------eecc-------------CC-CCCCCHHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEE
Confidence 0000 00 0012345666677777777665 78889999999
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhcC
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVG 244 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~lg 244 (572)
+.+++.+++++. +|. ++++|+||.|+|.+|...+..+
T Consensus 92 ~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~~~p~~~~ 128 (335)
T 2zbw_A 92 EREGDLFKVTTS---QGN----AYTAKAVIIAAGVGAFEPRRIG 128 (335)
T ss_dssp EEETTEEEEEET---TSC----EEEEEEEEECCTTSEEEECCCC
T ss_pred EECCCEEEEEEC---CCC----EEEeCEEEECCCCCCCCCCCCC
Confidence 888776666543 443 5889999999999876655443
No 59
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.13 E-value=2.4e-10 Score=117.76 Aligned_cols=125 Identities=16% Similarity=0.296 Sum_probs=85.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+..+||+||||||+|+++|+.|++.|++|+|||+.+.+. |.+... .|...
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~~----~~~~~------ 61 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--------------------GQLAAL----YPEKH------ 61 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHT----CTTSE------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--------------------Cccccc----CCCcc------
Confidence 345899999999999999999999999999999986541 111100 01000
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
+... + ....+.+..+...|.+.+.+.++ +++++++|+++
T Consensus 62 --------~~~~-------------~-~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i 100 (360)
T 3ab1_A 62 --------IYDV-------------A-GFPEVPAIDLVESLWAQAERYNP-------------------DVVLNETVTKY 100 (360)
T ss_dssp --------ECCS-------------T-TCSSEEHHHHHHHHHHHHHTTCC-------------------EEECSCCEEEE
T ss_pred --------cccC-------------C-CCCCCCHHHHHHHHHHHHHHhCC-------------------EEEcCCEEEEE
Confidence 0000 0 00113455677778888877665 78889999999
Q ss_pred eeeCC-eEEEEEEeccCCceeeEEEEecEEEeecCCChhhhhhc
Q 008258 201 SATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV 243 (572)
Q Consensus 201 ~~~~~-~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~l 243 (572)
+.+++ .+++++. +|. ++++|+||.|+|.+|..++.+
T Consensus 101 ~~~~~~~~~v~~~---~g~----~~~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 101 TKLDDGTFETRTN---TGN----VYRSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EECTTSCEEEEET---TSC----EEEEEEEEECCTTCSCCBCCC
T ss_pred EECCCceEEEEEC---CCc----EEEeeEEEEccCCCcCCCCCC
Confidence 88765 5666543 443 689999999999988666544
No 60
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.12 E-value=2.6e-10 Score=116.62 Aligned_cols=130 Identities=16% Similarity=0.244 Sum_probs=85.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
++||+||||||+|+++|..|+++|++|+|||+.+.+. +...+ .++++ ....+... .
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g----g~~~~--------~~~~~-----~~~~~~~~-------~ 58 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG----GAWQH--------AWHSL-----HLFSPAGW-------S 58 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS----GGGGG--------SCTTC-----BCSSCGGG-------S
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC----CcccC--------CCCCc-----EecCchhh-------h
Confidence 4799999999999999999999999999999987542 10000 00000 00000000 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
...+ +. .........++..+...|.+.+++.|+ +++++++|++++.
T Consensus 59 ~~~~-------------~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i~~ 104 (357)
T 4a9w_A 59 SIPG-------------WP--MPASQGPYPARAEVLAYLAQYEQKYAL-------------------PVLRPIRVQRVSH 104 (357)
T ss_dssp CCSS-------------SC--CCCCSSSSCBHHHHHHHHHHHHHHTTC-------------------CEECSCCEEEEEE
T ss_pred hCCC-------------CC--CCCCccCCCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEEE
Confidence 0000 00 001111224567888888888888876 7899999999999
Q ss_pred eCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 203 TDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 ~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++.++ +++. ++ ++++|+||.|+|.+|.
T Consensus 105 ~~~~~~~v~~~---~g-----~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 105 FGERLRVVARD---GR-----QWLARAVISATGTWGE 133 (357)
T ss_dssp ETTEEEEEETT---SC-----EEEEEEEEECCCSGGG
T ss_pred CCCcEEEEEeC---CC-----EEEeCEEEECCCCCCC
Confidence 888866 5432 33 6899999999999874
No 61
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.11 E-value=2.5e-09 Score=113.89 Aligned_cols=62 Identities=18% Similarity=0.250 Sum_probs=47.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC------CCEEEEcCCCCCCCCC------------Ce---eeeChhHHHHHHhhcch
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNKAFSTHP------------QA---HFINNRYALVFRKLDGL 101 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~G------i~v~viEr~~~~~~~~------------~a---~~l~~rt~e~l~~l~Gl 101 (572)
..||+|||||++||++|+.|+++| ++|+|+|+.+.+.-.. .+ ....++.+++++++ |+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~l-gl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDL-GL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHT-TC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHc-CC
Confidence 479999999999999999999999 9999999986542110 11 11246778888888 77
Q ss_pred HHHH
Q 008258 102 AEEI 105 (572)
Q Consensus 102 ~~~l 105 (572)
.+.+
T Consensus 84 ~~~~ 87 (470)
T 3i6d_A 84 EHLL 87 (470)
T ss_dssp CTTE
T ss_pred ccee
Confidence 6543
No 62
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.11 E-value=4.2e-10 Score=122.89 Aligned_cols=152 Identities=15% Similarity=0.196 Sum_probs=90.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC-CCCCCCe---eeeC-hhHHHHHHhhcchHHHHH-hcCCCcccc
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA-FSTHPQA---HFIN-NRYALVFRKLDGLAEEIE-RSQPPVDLW 115 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~-~~~~~~a---~~l~-~rt~e~l~~l~Gl~~~l~-~~~~~~~~~ 115 (572)
.++||+|||||++|+++|+.|++.|.+|+|||+.+. ....++. .++. ....+.++.++|+..... ..+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi----- 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGI----- 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEE-----
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhccc-----
Confidence 358999999999999999999999999999999852 3222221 1111 122333344423222111 1000
Q ss_pred cceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHh-cCceeeccCCcccccccccccceEEec
Q 008258 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMG 194 (572)
Q Consensus 116 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~g 194 (572)
.+.......|... ......+++..+...|.+.+++ .|+ ++ ++
T Consensus 102 -~f~~l~~~kgpav----------------~~~r~~~Dr~~~~~~L~e~Le~~~GV-------------------~I-~~ 144 (651)
T 3ces_A 102 -QFRILNASKGPAV----------------RATRAQADRVLYRQAVRTALENQPNL-------------------MI-FQ 144 (651)
T ss_dssp -EEEEESTTSCGGG----------------CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EE
T ss_pred -chhhhhcccCccc----------------ccchhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EE
Confidence 0111000001000 0011346677888888888877 465 66 56
Q ss_pred cEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhhh
Q 008258 195 HECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (572)
Q Consensus 195 ~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~ 242 (572)
++|+++..+++.+. |++. +|. +++||.||.|+|.+|..+..
T Consensus 145 ~~V~~L~~e~g~V~GV~t~---dG~----~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 145 QAVEDLIVENDRVVGAVTQ---MGL----KFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp CCEEEEEESSSBEEEEEET---TSE----EEEEEEEEECCSTTTCCEEE
T ss_pred EEEEEEEecCCEEEEEEEC---CCC----EEECCEEEEcCCCCccCccc
Confidence 78999887766653 3332 452 68999999999999866543
No 63
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.09 E-value=7.8e-10 Score=120.23 Aligned_cols=39 Identities=33% Similarity=0.451 Sum_probs=35.3
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 39 ~~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
|...++||||||||++||++|+.|++ |.+|+||||.+..
T Consensus 4 m~~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 4 LPEHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 44567899999999999999999999 9999999998754
No 64
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.09 E-value=4.2e-10 Score=119.69 Aligned_cols=68 Identities=10% Similarity=-0.048 Sum_probs=51.1
Q ss_pred cChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEe
Q 008258 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIG 231 (572)
Q Consensus 152 l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVg 231 (572)
.++..+.+.|.+.+.+.+. .++++++|++++.++++++|++....+|+. .+++++|+||.
T Consensus 112 ~~~~~l~~~l~~~~~~~~~-------------------~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~-~~~~~~d~VVv 171 (447)
T 2gv8_A 112 PHRHTIQEYQRIYAQPLLP-------------------FIKLATDVLDIEKKDGSWVVTYKGTKAGSP-ISKDIFDAVSI 171 (447)
T ss_dssp CBHHHHHHHHHHHHGGGGG-------------------GEECSEEEEEEEEETTEEEEEEEESSTTCC-EEEEEESEEEE
T ss_pred CCHHHHHHHHHHHHHHhhC-------------------eEEeCCEEEEEEeCCCeEEEEEeecCCCCe-eEEEEeCEEEE
Confidence 4567788888887766543 788999999999988888888763222420 34689999999
Q ss_pred ecCCChhh
Q 008258 232 TDGAGSTV 239 (572)
Q Consensus 232 ADG~~S~V 239 (572)
|+|.+|.-
T Consensus 172 AtG~~s~p 179 (447)
T 2gv8_A 172 CNGHYEVP 179 (447)
T ss_dssp CCCSSSSB
T ss_pred CCCCCCCC
Confidence 99998753
No 65
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.07 E-value=2.8e-09 Score=115.28 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=35.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+.++||||||||++||++|+.|+++|.+|+||||.+.+
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 46789999999999999999999999999999998765
No 66
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.07 E-value=1e-09 Score=119.50 Aligned_cols=152 Identities=15% Similarity=0.163 Sum_probs=91.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC-CCCCCCCe---eeeC-hhHHHHHHhhcchHHHHHh-cCCCcccc
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK-AFSTHPQA---HFIN-NRYALVFRKLDGLAEEIER-SQPPVDLW 115 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~-~~~~~~~a---~~l~-~rt~e~l~~l~Gl~~~l~~-~~~~~~~~ 115 (572)
.++||+|||||+||+++|+.|++.|.+|+|||+.+ .....++. .++. ....+.++.++|....+.. .+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi----- 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGI----- 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEE-----
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccc-----
Confidence 45899999999999999999999999999999984 22222221 1111 1223344444333222211 110
Q ss_pred cceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHh-cCceeeccCCcccccccccccceEEec
Q 008258 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMG 194 (572)
Q Consensus 116 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~g 194 (572)
.+.......|... ......+++..+...|.+.+++ .|+ ++ ++
T Consensus 101 -~f~~l~~~kGpav----------------~~~r~~~Dr~~~~~~L~~~Le~~~GV-------------------eI-~~ 143 (637)
T 2zxi_A 101 -QFKMLNTRKGKAV----------------QSPRAQADKKRYREYMKKVCENQENL-------------------YI-KQ 143 (637)
T ss_dssp -EEEEESTTSCGGG----------------CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EE
T ss_pred -ceeecccccCccc----------------cchhhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EE
Confidence 0111000011000 0011245677888888888877 355 66 56
Q ss_pred cEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhhhh
Q 008258 195 HECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (572)
Q Consensus 195 ~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR~~ 242 (572)
++|+++..+++.+. |.+. +|. +++||.||.|+|..+..+..
T Consensus 144 ~~Vt~L~~e~g~V~GV~t~---dG~----~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 144 EEVVDIIVKNNQVVGVRTN---LGV----EYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp SCEEEEEESSSBEEEEEET---TSC----EEECSEEEECCTTCBTCEEE
T ss_pred eEEEEEEecCCEEEEEEEC---CCc----EEEeCEEEEccCCCccCcee
Confidence 78999887777654 3332 453 68999999999998765543
No 67
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.07 E-value=1.2e-09 Score=119.34 Aligned_cols=151 Identities=17% Similarity=0.247 Sum_probs=89.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC-CCCCCCe---eeeC-hhHHHHHHhhcchHHHH-HhcCCCccc
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA-FSTHPQA---HFIN-NRYALVFRKLDGLAEEI-ERSQPPVDL 114 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~-~~~~~~a---~~l~-~rt~e~l~~l~Gl~~~l-~~~~~~~~~ 114 (572)
..++||+|||||++|+++|+.|++.|.+|+|||+.+. +...++. .++. ...++.++.++|+.... ...+.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi---- 94 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGI---- 94 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEE----
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCC----
Confidence 4468999999999999999999999999999999852 2222221 1111 12223333333322221 11110
Q ss_pred ccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhc-CceeeccCCcccccccccccceEEe
Q 008258 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILM 193 (572)
Q Consensus 115 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i~~ 193 (572)
.+.......|.. . ......+++..+...|.+.+++. |+ +++
T Consensus 95 --~f~~l~~~kgpa---------------v-~~~r~~~Dr~~l~~~L~~~l~~~~GV-------------------~I~- 136 (641)
T 3cp8_A 95 --QFRMLNRSKGPA---------------M-HSPRAQADKTQYSLYMRRIVEHEPNI-------------------DLL- 136 (641)
T ss_dssp --EEEEECSSSCTT---------------T-CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EEE-
T ss_pred --chhhcccccCcc---------------c-cchhhhcCHHHHHHHHHHHHHhCCCC-------------------EEE-
Confidence 011100000100 0 00113467778888888888774 55 663
Q ss_pred ccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEEeecCCChhhh
Q 008258 194 GHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (572)
Q Consensus 194 g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR 240 (572)
+.+|+.+..+++.+. |++. +|. +++||.||.|+|.++..+
T Consensus 137 ~~~V~~L~~d~g~V~GV~t~---~G~----~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 137 QDTVIGVSANSGKFSSVTVR---SGR----AIQAKAAILACGTFLNGL 177 (641)
T ss_dssp ECCEEEEEEETTEEEEEEET---TSC----EEEEEEEEECCTTCBTCE
T ss_pred eeEEEEEEecCCEEEEEEEC---CCc----EEEeCEEEECcCCCCCcc
Confidence 558888888777765 4432 453 689999999999987543
No 68
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.06 E-value=2e-09 Score=118.41 Aligned_cols=68 Identities=16% Similarity=0.264 Sum_probs=50.9
Q ss_pred hhHHHHHHHHHHhcC-ceeeccCCcccccccccccceEEeccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEEee
Q 008258 155 YKLNKLLLKQLEKLN-FKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGT 232 (572)
Q Consensus 155 ~~L~~~L~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgA 232 (572)
..+...|.+.+.+.| + +++++++++++..+++.+. +.+....+| +..+++|+.||.|
T Consensus 134 ~~l~~~L~~~~~~~gnv-------------------~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G--~~~~i~A~~VVlA 192 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQI-------------------QRFDEHFVLDILVDDGHVRGLVAMNMMEG--TLVQIRANAVVMA 192 (602)
T ss_dssp HHHHHHHHHHHTTCTTE-------------------EEEETEEEEEEEEETTEEEEEEEEETTTT--EEEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhCCCc-------------------EEEeCCEEEEEEEeCCEEEEEEEEEcCCC--cEEEEEcCeEEEC
Confidence 467788888887766 5 8999999999988776543 223322344 3457999999999
Q ss_pred cCCChhhhhhc
Q 008258 233 DGAGSTVRKLV 243 (572)
Q Consensus 233 DG~~S~VR~~l 243 (572)
+|..|.++...
T Consensus 193 tGg~s~~~~~~ 203 (602)
T 1kf6_A 193 TGGAGRVYRYN 203 (602)
T ss_dssp CCCCGGGSSSB
T ss_pred CCCCcccccCc
Confidence 99999987654
No 69
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.06 E-value=2e-09 Score=113.33 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=32.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+||+|||||++||++|+.|+++|.+|+|+|+++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 48999999999999999999999999999998765
No 70
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.05 E-value=5.5e-10 Score=121.36 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=86.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHH-hCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLT-KLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La-~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
+.++||+|||||++|+++|+.|+ +.|++|+||||.+.+. |.+.. ...|.. ....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G--------------------Gtw~~---~~ypg~--~~d~ 60 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG--------------------GTWYW---NRYPGA--LSDT 60 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC--------------------THHHH---CCCTTC--EEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC--------------------Ccccc---cCCCCc--eecC
Confidence 44689999999999999999999 9999999999987542 11110 000000 0000
Q ss_pred eeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
... ..... +.. .... ..+......++..+...|.+.+++.|+ ...++++++|++
T Consensus 61 -----~s~-~~~~~-~~~-~~~~-~~~~~~~~~~~~ei~~~l~~~~~~~g~-----------------~~~i~~~~~V~~ 114 (540)
T 3gwf_A 61 -----ESH-LYRFS-FDR-DLLQ-ESTWKTTYITQPEILEYLEDVVDRFDL-----------------RRHFKFGTEVTS 114 (540)
T ss_dssp -----EGG-GSSCC-SCH-HHHH-HCCCSBSEEEHHHHHHHHHHHHHHTTC-----------------GGGEEESCCEEE
T ss_pred -----Ccc-eeeec-ccc-cccc-CCCCcccCCCHHHHHHHHHHHHHHcCC-----------------cceeEeccEEEE
Confidence 000 00000 000 0000 001111234677888888888888764 126899999999
Q ss_pred EeeeCC--eEEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 200 VSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 200 v~~~~~--~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
++.+++ .++|++. +|+ +++||+||.|+|..|.-
T Consensus 115 i~~~~~~~~~~V~~~---~G~----~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 115 ALYLDDENLWEVTTD---HGE----VYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp EEEETTTTEEEEEET---TSC----EEEEEEEEECCCSCCSB
T ss_pred EEEeCCCCEEEEEEc---CCC----EEEeCEEEECCcccccC
Confidence 988776 5666553 553 68999999999987743
No 71
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.04 E-value=2e-09 Score=108.41 Aligned_cols=144 Identities=18% Similarity=0.270 Sum_probs=86.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCC-------CCeeeeChhHHHHHHhhcchHHHHHhcCCCc
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTH-------PQAHFINNRYALVFRKLDGLAEEIERSQPPV 112 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~~~~-------~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~ 112 (572)
.++||+||||||+||++|+.|++. |.+|+|+|+.+.+... .....+.+...+.|+++ |+ +.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~-Gv---------~~ 133 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQEL-EI---------PY 133 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHT-TC---------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhh-Cc---------cc
Confidence 457999999999999999999999 9999999998765311 11122333333444433 21 11
Q ss_pred ccccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhc-CceeeccCCcccccccccccceE
Q 008258 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (572)
Q Consensus 113 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~i 191 (572)
.. .|... .......+...|++.+.+. |+ ++
T Consensus 134 ~~----------~g~~~--------------------~~~~~~~~~~~L~~~a~~~~GV-------------------~i 164 (326)
T 2gjc_A 134 ED----------EGDYV--------------------VVKHAALFISTVLSKVLQLPNV-------------------KL 164 (326)
T ss_dssp EE----------CSSEE--------------------EESCHHHHHHHHHHHHHTSTTE-------------------EE
T ss_pred cc----------CCCeE--------------------EEcchHHHHHHHHHHHHHhcCc-------------------EE
Confidence 00 01100 1112346677788887764 54 88
Q ss_pred EeccEEEEEeeeC----C--eEE-EEEEec---cCC----ceeeEEEEe---------------cEEEeecCCChhhhhh
Q 008258 192 LMGHECVSVSATD----Q--CIN-VIASFL---KEG----KCTERNIQC---------------NILIGTDGAGSTVRKL 242 (572)
Q Consensus 192 ~~g~~v~~v~~~~----~--~v~-v~~~~~---~~g----~~~~~~i~a---------------d~vVgADG~~S~VR~~ 242 (572)
+.+++++++..++ + .|+ |.+... .+| .....+++| ++||.|+|..|++.+.
T Consensus 165 ~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~ 244 (326)
T 2gjc_A 165 FNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAF 244 (326)
T ss_dssp ETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSH
T ss_pred EecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHH
Confidence 8899999987763 2 232 122110 011 112357999 9999999999988876
Q ss_pred cC
Q 008258 243 VG 244 (572)
Q Consensus 243 lg 244 (572)
+.
T Consensus 245 ~~ 246 (326)
T 2gjc_A 245 CA 246 (326)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 72
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.04 E-value=1.8e-09 Score=117.65 Aligned_cols=142 Identities=19% Similarity=0.174 Sum_probs=86.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+|||||++|+++|+.|++.|++|+||||.+.+. |.+. ....|....
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G--------------------G~w~---~~~~pg~~~----- 65 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG--------------------GVWY---WNRYPGARC----- 65 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------THHH---HCCCTTCBC-----
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC--------------------Cccc---ccCCCceee-----
Confidence 456899999999999999999999999999999987652 1111 000110000
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
. .... ..... +.+..... .+......++..+.+.|...+++.+. ...++++++|+++
T Consensus 66 -d-~~~~-~~~~~-f~~~~~~~--~~~~~~~~~~~~i~~yl~~~~~~~~l-----------------~~~i~~~~~V~~~ 122 (542)
T 1w4x_A 66 -D-IESI-EYCYS-FSEEVLQE--WNWTERYASQPEILRYINFVADKFDL-----------------RSGITFHTTVTAA 122 (542)
T ss_dssp -S-SCTT-TSSCC-SCHHHHHH--CCCCBSSCBHHHHHHHHHHHHHHTTG-----------------GGGEECSCCEEEE
T ss_pred -c-cccc-ccccc-cChhhhhc--cCcccccCCHHHHHHHHHHHHHHcCC-----------------CceEEcCcEEEEE
Confidence 0 0000 00000 00000000 00011234577788777777776653 2378999999999
Q ss_pred eeeCC--eEEEEEEeccCCceeeEEEEecEEEeecCCChhhh
Q 008258 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (572)
Q Consensus 201 ~~~~~--~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR 240 (572)
+.+++ .++|++. +|. +++||+||.|+|..|.-+
T Consensus 123 ~~~~~~~~w~V~~~---~G~----~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 123 AFDEATNTWTVDTN---HGD----RIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSCCCCC
T ss_pred EEcCCCCeEEEEEC---CCC----EEEeCEEEECcCCCCCCC
Confidence 87654 5666553 553 689999999999987543
No 73
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.02 E-value=4.9e-10 Score=113.87 Aligned_cols=124 Identities=19% Similarity=0.242 Sum_probs=83.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
...+||+||||||+||++|+.|++.|++|+|||+.+.....+. |.+. ...
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g----------------g~~~-------------~~~- 69 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG----------------GQLT-------------TTT- 69 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT----------------CGGG-------------GSS-
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC----------------cccc-------------cch-
Confidence 4568999999999999999999999999999999763222221 1110 000
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.+. .+ |.....+....+...|.+.+.+.|+ ++++++ ++++
T Consensus 70 -------~~~--------~~-----~~~~~~~~~~~~~~~~~~~~~~~gv-------------------~i~~~~-v~~i 109 (338)
T 3itj_A 70 -------EIE--------NF-----PGFPDGLTGSELMDRMREQSTKFGT-------------------EIITET-VSKV 109 (338)
T ss_dssp -------EEC--------CS-----TTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECSC-EEEE
T ss_pred -------hhc--------cc-----CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEEeE-EEEE
Confidence 000 00 0000123456777788888888876 788888 8999
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+.+++.++++....+++ .++.+|+||.|+|.++.
T Consensus 110 ~~~~~~~~v~~~~~~~~----~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 110 DLSSKPFKLWTEFNEDA----EPVTTDAIILATGASAK 143 (338)
T ss_dssp ECSSSSEEEEETTCSSS----CCEEEEEEEECCCEEEC
T ss_pred EEcCCEEEEEEEecCCC----cEEEeCEEEECcCCCcC
Confidence 88888877665311223 26889999999998654
No 74
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.99 E-value=3.5e-08 Score=106.07 Aligned_cols=61 Identities=18% Similarity=0.271 Sum_probs=46.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC------------Ceeee---ChhHHHHHHhhcchHHH
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP------------QAHFI---NNRYALVFRKLDGLAEE 104 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~------------~a~~l---~~rt~e~l~~l~Gl~~~ 104 (572)
++||+|||||++||++|..|++.|++|+|+|+++.+.-+- .++.+ .++.++.++++ |+.++
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~l-gl~~~ 114 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRY-KMHNA 114 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHT-TCTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHc-CCcce
Confidence 3799999999999999999999999999999987652111 11222 46777777777 76443
No 75
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.98 E-value=8.7e-10 Score=117.11 Aligned_cols=35 Identities=26% Similarity=0.345 Sum_probs=32.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~ 76 (572)
.++||+|||||++|+++|+.|+++| .+|+||||..
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~ 57 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGH 57 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCC
Confidence 4689999999999999999999999 9999999933
No 76
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.97 E-value=3e-09 Score=121.79 Aligned_cols=70 Identities=14% Similarity=0.232 Sum_probs=52.5
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vV 230 (572)
.++...+...|.+.+.+.|+ +++++++|++++.+++++..... ++| +++||.||
T Consensus 147 ~v~p~~l~~~L~~~a~~~Gv-------------------~i~~~t~V~~i~~~~~~v~~V~t--~~G-----~i~Ad~VV 200 (830)
T 1pj5_A 147 LASAARAVQLLIKRTESAGV-------------------TYRGSTTVTGIEQSGGRVTGVQT--ADG-----VIPADIVV 200 (830)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEEETTEEEEEEE--TTE-----EEECSEEE
T ss_pred eEcHHHHHHHHHHHHHHcCC-------------------EEECCceEEEEEEeCCEEEEEEE--CCc-----EEECCEEE
Confidence 34566788899999999887 88999999999988777542222 233 68999999
Q ss_pred eecCCChhh-hhhcCCc
Q 008258 231 GTDGAGSTV-RKLVGID 246 (572)
Q Consensus 231 gADG~~S~V-R~~lg~~ 246 (572)
.|+|+.|.. .+.+|..
T Consensus 201 ~AaG~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 201 SCAGFWGAKIGAMIGMA 217 (830)
T ss_dssp ECCGGGHHHHHHTTTCC
T ss_pred ECCccchHHHHHHhCCC
Confidence 999999863 3445543
No 77
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.97 E-value=6.8e-10 Score=112.84 Aligned_cols=121 Identities=21% Similarity=0.225 Sum_probs=78.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+..+||+||||||+|+++|+.|++.|++|+|||+......... |.. ..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~g----------------g~~-------------~~--- 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPG----------------GQL-------------TT--- 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT----------------CGG-------------GG---
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCC----------------cee-------------ee---
Confidence 4468999999999999999999999999999998211100000 100 00
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
. ..... + |.....+.+..+...|.+.+.+.|+ ++++++ ++++
T Consensus 54 ----~-~~~~~--------~-----~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~~~~~~-v~~i 95 (333)
T 1vdc_A 54 ----T-TDVEN--------F-----PGFPEGILGVELTDKFRKQSERFGT-------------------TIFTET-VTKV 95 (333)
T ss_dssp ----C-SEECC--------S-----TTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECCC-CCEE
T ss_pred ----c-ccccc--------C-----CCCccCCCHHHHHHHHHHHHHHCCC-------------------EEEEeE-EEEE
Confidence 0 00000 0 0000123455777778888877776 777776 8888
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
+.+++.+++++ ++. ++++|+||.|+|.++..
T Consensus 96 ~~~~~~~~v~~----~~~----~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 96 DFSSKPFKLFT----DSK----AILADAVILAIGAVAKR 126 (333)
T ss_dssp ECSSSSEEEEC----SSE----EEEEEEEEECCCEEECC
T ss_pred EEcCCEEEEEE----CCc----EEEcCEEEECCCCCcCC
Confidence 87777666654 332 68999999999987643
No 78
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.96 E-value=3e-09 Score=115.86 Aligned_cols=140 Identities=16% Similarity=0.222 Sum_probs=85.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+|||||++|+++|+.|++.|++|+||||.+.+. . +.. ....+|+. ...+...+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G---G-------tw~-~~~ypg~~-----~dv~s~~y~---- 78 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG---G-------VWY-WNRYPGAR-----CDVESIDYS---- 78 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC---T-------HHH-HCCCTTCB-----CSSCTTTSS----
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC---C-------ccc-cCCCCCce-----eCCCchhcc----
Confidence 456899999999999999999999999999999987542 0 000 00011110 000000000
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.. +.. .... .........++..+...|.+.+++.|+ ...++++++|+++
T Consensus 79 -----------~~-f~~-~~~~-~~~~~~~~~~~~ei~~yl~~~~~~~g~-----------------~~~i~~~~~V~~i 127 (549)
T 4ap3_A 79 -----------YS-FSP-ELEQ-EWNWSEKYATQPEILAYLEHVADRFDL-----------------RRDIRFDTRVTSA 127 (549)
T ss_dssp -----------CC-SCH-HHHH-HCCCSSSSCBHHHHHHHHHHHHHHTTC-----------------GGGEECSCCEEEE
T ss_pred -----------cc-ccc-cccc-CCCCccCCCCHHHHHHHHHHHHHHcCC-----------------CccEEECCEEEEE
Confidence 00 000 0000 000011234677888888888888765 1368899999999
Q ss_pred eeeCC--eEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 201 ~~~~~--~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+.+++ .++|++. +|. +++||+||.|+|..|.
T Consensus 128 ~~~~~~~~w~V~~~---~G~----~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 128 VLDEEGLRWTVRTD---RGD----EVSARFLVVAAGPLSN 160 (549)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSEEE
T ss_pred EEcCCCCEEEEEEC---CCC----EEEeCEEEECcCCCCC
Confidence 88766 5556553 553 6899999999998764
No 79
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.95 E-value=2.9e-09 Score=107.82 Aligned_cols=118 Identities=20% Similarity=0.287 Sum_probs=82.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.+||+||||||+|+++|+.|++.|++|+|||+.+.+. |.+... .|...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------G~~~~~----~~~~~-------- 54 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG--------------------GQLSAL----YPEKY-------- 54 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHH----CTTSE--------
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC--------------------ceehhc----CCCce--------
Confidence 4799999999999999999999999999999987631 222110 01000
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+... .. ...++...+...|.+.+.+.|+ +++++++|++++.
T Consensus 55 ------~~~~------------~~--~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~v~~i~~ 95 (332)
T 3lzw_A 55 ------IYDV------------AG--FPKIRAQELINNLKEQMAKFDQ-------------------TICLEQAVESVEK 95 (332)
T ss_dssp ------ECCS------------TT--CSSEEHHHHHHHHHHHHTTSCC-------------------EEECSCCEEEEEE
T ss_pred ------Eecc------------CC--CCCCCHHHHHHHHHHHHHHhCC-------------------cEEccCEEEEEEE
Confidence 0000 00 0113456777778888877765 8899999999988
Q ss_pred eCC-eEEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 203 TDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 203 ~~~-~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
+++ .+.+++. +| ++.+|+||.|.|.+|..
T Consensus 96 ~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~~~ 125 (332)
T 3lzw_A 96 QADGVFKLVTN---EE-----THYSKTVIITAGNGAFK 125 (332)
T ss_dssp CTTSCEEEEES---SE-----EEEEEEEEECCTTSCCE
T ss_pred CCCCcEEEEEC---CC-----EEEeCEEEECCCCCcCC
Confidence 776 5666553 33 38899999999996643
No 80
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.95 E-value=4.6e-09 Score=112.00 Aligned_cols=152 Identities=17% Similarity=0.248 Sum_probs=84.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCC-----CCEEEEcCCCCCCCCCCeeeeChhHH--HHHHhhcchHHHHHhcCCCccc
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLG-----IKCSVLEKNKAFSTHPQAHFINNRYA--LVFRKLDGLAEEIERSQPPVDL 114 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~G-----i~v~viEr~~~~~~~~~a~~l~~rt~--e~l~~l~Gl~~~l~~~~~~~~~ 114 (572)
..+||+||||||+|+++|+.|++.| ++|+||||.+.+...+.. .+....+ ..++++ .....|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~-~~~~~~~~~~~~~~l-------~~~~~p~~~ 100 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNT-LVSQSELQISFLKDL-------VSLRNPTSP 100 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGG-CCSSCBCSSCTTSSS-------STTTCTTCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCC-CCCCCcCCcchhhcc-------ccccCCCCC
Confidence 4579999999999999999999999 999999999865422100 0000000 000000 000000000
Q ss_pred ccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEec
Q 008258 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMG 194 (572)
Q Consensus 115 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g 194 (572)
+....|.. ..+... .+. .......++..+...|...+.+.+. .++++
T Consensus 101 ~~~~~~l~-~~~~~~---------~~~----~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~i~~~ 147 (463)
T 3s5w_A 101 YSFVNYLH-KHDRLV---------DFI----NLGTFYPCRMEFNDYLRWVASHFQE-------------------QSRYG 147 (463)
T ss_dssp TSHHHHHH-HTTCHH---------HHH----HHCCSCCBHHHHHHHHHHHHTTCTT-------------------TEEES
T ss_pred CChhHhhh-hcCcee---------ecc----cccCCCCCHHHHHHHHHHHHHHcCC-------------------eEEeC
Confidence 00000000 000000 000 0011223567777777777777665 88999
Q ss_pred cEEEEEeee---CCe--EEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 195 HECVSVSAT---DQC--INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 195 ~~v~~v~~~---~~~--v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
++|++++.+ +.. ++|++. +|.++++++++|.||.|+|...
T Consensus 148 ~~V~~i~~~~~~~~~~~~~V~~~---~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 148 EEVLRIEPMLSAGQVEALRVISR---NADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEE---ETTSCEEEEEESEEEECCCCEE
T ss_pred CEEEEEEEecCCCceEEEEEEEe---cCCCceEEEEeCEEEECCCCCC
Confidence 999999876 333 355554 3333455799999999999744
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.95 E-value=3.9e-09 Score=112.64 Aligned_cols=157 Identities=17% Similarity=0.182 Sum_probs=88.0
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCC---EEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcc--cc
Q 008258 44 VPVLIVGAGPVGLVLSILLTK---LGIK---CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVD--LW 115 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~---~Gi~---v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~--~~ 115 (572)
.||+||||||+||++|..|++ .|++ |+||||.+.+. ........ . |+. ..+.+.. .+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G---G~w~~~~~-------~-g~~----~~g~~~~~~~y 67 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG---GQWNYTWR-------T-GLD----ENGEPVHSSMY 67 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC---GGGSCCSC-------C-SBC----TTSSBCCCCCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC---CEeecCCC-------C-Ccc----ccCCCCcCccc
Confidence 589999999999999999999 9999 99999986542 00000000 0 100 0000000 00
Q ss_pred cceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEecc
Q 008258 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (572)
Q Consensus 116 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~ 195 (572)
... . .+ ..+.......+ .+............++..+.+.|.+.+++.|+ ...+++++
T Consensus 68 ~~l-~-~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv-----------------~~~i~~~~ 124 (464)
T 2xve_A 68 RYL-W-SN-GPKECLEFADY---TFDEHFGKPIASYPPREVLWDYIKGRVEKAGV-----------------RKYIRFNT 124 (464)
T ss_dssp TTC-B-CS-SCGGGTCBTTB---CHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTC-----------------GGGEECSE
T ss_pred cch-h-hc-CChhhcccCCC---CCCcccCCCCCCCCCHHHHHHHHHHHHHHcCC-----------------cceEEeCC
Confidence 000 0 00 00000000000 00000000001234667888888888888776 01388999
Q ss_pred EEEEEeeeCC--eEEEEEEeccCCceeeEEEEecEEEeecCCChhhh
Q 008258 196 ECVSVSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (572)
Q Consensus 196 ~v~~v~~~~~--~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR 240 (572)
+|++++.+++ .++|++....+| ...++.+|.||.|+|.+|.-+
T Consensus 125 ~V~~v~~~~~~~~~~V~~~~~~~g--~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 125 AVRHVEFNEDSQTFTVTVQDHTTD--TIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTT--EEEEEEESEEEECCCSSSSBC
T ss_pred EEEEEEEcCCCCcEEEEEEEcCCC--ceEEEEcCEEEECCCCCCCCc
Confidence 9999998766 677777632223 335789999999999876544
No 82
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.94 E-value=2.1e-08 Score=111.07 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=34.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+.++||||||||++||++|+.|++.|.+|+||||.+..
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 45689999999999999999999999999999998643
No 83
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.94 E-value=1.4e-08 Score=111.36 Aligned_cols=67 Identities=10% Similarity=0.069 Sum_probs=49.6
Q ss_pred hhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeC-CeEE-EEEEeccCCceeeEEEEecEEEe
Q 008258 154 QYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIG 231 (572)
Q Consensus 154 q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~-~~v~-v~~~~~~~g~~~~~~i~ad~vVg 231 (572)
...+...|.+.+.+.|+ +|+++++++++..++ +.|+ |.+.. .+| +..+++||.||.
T Consensus 254 g~~l~~~L~~~~~~~gv-------------------~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G--~~~~i~A~~VVl 311 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGT-------------------DIRLNSRVVRILEDASGKVTGVLVKG-EYT--GYYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHHHTTC-------------------EEESSEEEEEEEEC--CCEEEEEEEE-TTT--EEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHcCC-------------------eEEecCEEEEEEECCCCeEEEEEEEe-CCC--cEEEEEcCEEEE
Confidence 45678889999988887 899999999998766 5443 44442 134 345799999999
Q ss_pred ecCCChhhhhh
Q 008258 232 TDGAGSTVRKL 242 (572)
Q Consensus 232 ADG~~S~VR~~ 242 (572)
|+|..|..++.
T Consensus 312 AtGg~~~~~~~ 322 (572)
T 1d4d_A 312 AAGGFAKNNER 322 (572)
T ss_dssp CCCCCTTCHHH
T ss_pred eCCCCccCHHH
Confidence 99999976543
No 84
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.92 E-value=7e-09 Score=113.55 Aligned_cols=73 Identities=19% Similarity=0.076 Sum_probs=53.0
Q ss_pred cChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEE
Q 008258 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILI 230 (572)
Q Consensus 152 l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vV 230 (572)
++-..+...|.+.+.+.|+ +++.+++|+++..+++.+. |++.+..+| +..+++||.||
T Consensus 185 v~~~~l~~~l~~~a~~~Ga-------------------~i~~~t~V~~l~~~~~~v~gV~~~d~~tg--~~~~i~A~~VV 243 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGA-------------------YLVSKMKAVGFLYEGDQIVGVKARDLLTD--EVIEIKAKLVI 243 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTC-------------------EEESSEEEEEEEEETTEEEEEEEEETTTC--CEEEEEBSCEE
T ss_pred EchHHHHHHHHHHHHHcCC-------------------eEEeccEEEEEEEeCCEEEEEEEEEcCCC--CEEEEEcCEEE
Confidence 4445677778888888887 8999999999998877643 555432233 33479999999
Q ss_pred eecCCChh-hhhhcCC
Q 008258 231 GTDGAGST-VRKLVGI 245 (572)
Q Consensus 231 gADG~~S~-VR~~lg~ 245 (572)
.|.|+.|. +++..+.
T Consensus 244 ~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 244 NTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCGGGHHHHHTTCCS
T ss_pred ECCChhHHHHHHhhcc
Confidence 99999984 5655553
No 85
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.91 E-value=4.9e-09 Score=105.37 Aligned_cols=115 Identities=19% Similarity=0.315 Sum_probs=79.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
+||+||||||+|+++|+.|++.|+ +|+|||+.. + .+...+ . . .. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~----gg~~~~---------~-~----------~~---~------ 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-P----GGQITG---------S-S----------EI---E------ 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-T----TCGGGG---------C-S----------CB---C------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-C----Cccccc---------c-c----------cc---c------
Confidence 689999999999999999999999 999999852 1 110000 0 0 00 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
.+ |.....+++..+.+.|.+.+.+.|+ ++++ +++++++.
T Consensus 48 ----------------~~-----~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~-~~v~~i~~ 86 (311)
T 2q0l_A 48 ----------------NY-----PGVKEVVSGLDFMQPWQEQCFRFGL-------------------KHEM-TAVQRVSK 86 (311)
T ss_dssp ----------------CS-----TTCCSCBCHHHHHHHHHHHHHTTSC-------------------EEEC-SCEEEEEE
T ss_pred ----------------cC-----CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEEE
Confidence 00 0000134566777788888877776 6766 68888988
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhhh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~VR 240 (572)
+++.+++++. +|. ++++|+||.|+|.++.+.
T Consensus 87 ~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 87 KDSHFVILAE---DGK----TFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp ETTEEEEEET---TSC----EEEEEEEEECCCEEECCC
T ss_pred cCCEEEEEEc---CCC----EEECCEEEECCCCCCCCC
Confidence 8777666553 443 689999999999877543
No 86
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.91 E-value=2.8e-08 Score=102.29 Aligned_cols=37 Identities=22% Similarity=0.528 Sum_probs=34.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+.++||+|||||++|+++|+.|+++|.+|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 4568999999999999999999999999999999753
No 87
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.90 E-value=1.7e-08 Score=110.86 Aligned_cols=39 Identities=21% Similarity=0.409 Sum_probs=35.2
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 40 ~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
...++||||||||++||++|+.|++.|.+|+||||.+..
T Consensus 4 ~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 4 PVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 345689999999999999999999999999999998654
No 88
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.90 E-value=7.4e-09 Score=104.84 Aligned_cols=116 Identities=22% Similarity=0.298 Sum_probs=77.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+..+||+||||||+|+++|+.|++.|++|+|||+. .+ .+... .. + .. ..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~----gg~~~---------~~-~----------~~---~~--- 54 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MP----GGQIA---------WS-E----------EV---EN--- 54 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CT----TGGGG---------GC-S----------CB---CC---
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CC----Ccccc---------cc-c----------cc---cc---
Confidence 34689999999999999999999999999999997 22 11000 00 0 00 00
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
..+ + + ..+++..+...|.+.+.+.|+ ++++ .+++++
T Consensus 55 ---~~~-------------~-----~---~~~~~~~~~~~l~~~~~~~gv-------------------~~~~-~~v~~i 90 (325)
T 2q7v_A 55 ---FPG-------------F-----P---EPIAGMELAQRMHQQAEKFGA-------------------KVEM-DEVQGV 90 (325)
T ss_dssp ---STT-------------C-----S---SCBCHHHHHHHHHHHHHHTTC-------------------EEEE-CCEEEE
T ss_pred ---CCC-------------C-----C---CCCCHHHHHHHHHHHHHHcCC-------------------EEEe-eeEEEE
Confidence 000 0 0 123456777778888888776 6666 578888
Q ss_pred eee--CCe-EEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 201 SAT--DQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 201 ~~~--~~~-v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+.+ ++. ++++.. +|. ++++|+||.|+|.++.
T Consensus 91 ~~~~~~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 91 QHDATSHPYPFTVRG---YNG----EYRAKAVILATGADPR 124 (325)
T ss_dssp EECTTSSSCCEEEEE---SSC----EEEEEEEEECCCEEEC
T ss_pred EeccCCCceEEEEEC---CCC----EEEeCEEEECcCCCcC
Confidence 776 443 556554 453 6899999999998653
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.89 E-value=6.4e-09 Score=113.11 Aligned_cols=141 Identities=13% Similarity=0.254 Sum_probs=84.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+|||||++|+++|+.|++.|++|+||||.+.+.. +.. ....||+. ...+...+. +.+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG----------tw~-~~~yPg~~-----~d~~~~~y~-~~f 69 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG----------TWY-WNRYPGCR-----LDTESYAYG-YFA 69 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT----------HHH-HCCCTTCB-----CSSCHHHHC-HHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC----------ccc-cCCCCcee-----ecCchhhcc-ccc
Confidence 3458999999999999999999999999999999876420 000 00011100 000000000 000
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
..... . .+ .......++..+...|.+.+++.|+ ...++++++|+++
T Consensus 70 ----~~~~~------~--~~-----~~~~~~~~~~ei~~yl~~~~~~~~l-----------------~~~i~~~~~V~~~ 115 (545)
T 3uox_A 70 ----LKGII------P--EW-----EWSENFASQPEMLRYVNRAADAMDV-----------------RKHYRFNTRVTAA 115 (545)
T ss_dssp ----HTTSS------T--TC-----CCSBSSCBHHHHHHHHHHHHHHHTC-----------------GGGEECSCCEEEE
T ss_pred ----Ccccc------c--CC-----CccccCCCHHHHHHHHHHHHHHcCC-----------------cCcEEECCEEEEE
Confidence 00000 0 00 0011234677788888887877764 1268899999999
Q ss_pred eeeCC--eEEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 201 ~~~~~--~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
+.+++ .++|++. +|. +++||+||.|+|..|.-
T Consensus 116 ~~~~~~~~w~V~~~---~G~----~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 116 RYVENDRLWEVTLD---NEE----VVTCRFLISATGPLSAS 149 (545)
T ss_dssp EEEGGGTEEEEEET---TTE----EEEEEEEEECCCSCBC-
T ss_pred EEeCCCCEEEEEEC---CCC----EEEeCEEEECcCCCCCC
Confidence 87655 5555553 553 68999999999987643
No 90
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.89 E-value=6.2e-09 Score=104.82 Aligned_cols=112 Identities=16% Similarity=0.210 Sum_probs=76.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
+.+||+||||||+|+++|+.|++.|++|+||||. + + |.+.. .+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~---g-----------------g~~~~-----~~~--------- 57 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P---G-----------------GQLTE-----AGI--------- 57 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T---T-----------------GGGGG-----CCE---------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C---C-----------------Ceecc-----ccc---------
Confidence 3589999999999999999999999999999987 2 1 11000 000
Q ss_pred eCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
... . |. ...+....+...|.+.+.+.|+ ++++ +++++++
T Consensus 58 -------~~~------------~-~~-~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i~ 96 (323)
T 3f8d_A 58 -------VDD------------Y-LG-LIEIQASDMIKVFNKHIEKYEV-------------------PVLL-DIVEKIE 96 (323)
T ss_dssp -------ECC------------S-TT-STTEEHHHHHHHHHHHHHTTTC-------------------CEEE-SCEEEEE
T ss_pred -------ccc------------c-CC-CCCCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEE
Confidence 000 0 00 0013345677777788877776 6777 8899998
Q ss_pred eeCCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 202 ~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
.+++.+.++.. ++. ++.+|+||.|.|...
T Consensus 97 ~~~~~~~v~~~---~g~----~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 97 NRGDEFVVKTK---RKG----EFKADSVILGIGVKR 125 (323)
T ss_dssp EC--CEEEEES---SSC----EEEEEEEEECCCCEE
T ss_pred ecCCEEEEEEC---CCC----EEEcCEEEECcCCCC
Confidence 88777777654 443 689999999999874
No 91
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.88 E-value=1.8e-07 Score=98.47 Aligned_cols=35 Identities=31% Similarity=0.400 Sum_probs=32.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+||+|||||++||++|+.|+++|.+|+|||+++.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 69999999999999999999999999999997643
No 92
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.87 E-value=1.3e-08 Score=112.80 Aligned_cols=45 Identities=18% Similarity=0.117 Sum_probs=37.4
Q ss_pred ccccCCCCccCCEEEECCCHHHHHHHHHHHhC------CCCEEEEcCCCCC
Q 008258 34 SKTIVSNEAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAF 78 (572)
Q Consensus 34 ~~~~~~~~~~~dVlIVGaGpaGL~~A~~La~~------Gi~v~viEr~~~~ 78 (572)
+..+.+...++||||||||+|||++|+.|++. |.+|+||||.+..
T Consensus 13 ~~~~~~~~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 13 IAEPIIVEHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp CCSCCCEEEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred cccCccceEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 33333445679999999999999999999998 9999999998653
No 93
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.87 E-value=4.2e-08 Score=107.96 Aligned_cols=64 Identities=13% Similarity=0.100 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEE-EEEEeccCCceeeEEEEecEEEeec
Q 008258 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTD 233 (572)
Q Consensus 155 ~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~-v~~~~~~~g~~~~~~i~ad~vVgAD 233 (572)
..+...|.+.+.+.|+ +|+++++++++..+++.+. |.+....+| +...++|+.||.|+
T Consensus 155 ~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G--~~~~i~A~~VVlAT 213 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDT-------------------SYFVEYFALDLLMENGECRGVIALCIEDG--TIHRFRAKNTVIAT 213 (621)
T ss_dssp HHHHHHHHHHHTTSCC-------------------EEEETEEEEEEEEETTEEEEEEEEETTTC--CEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCC-------------------EEEEceEEEEEEEECCEEEEEEEEEcCCC--cEEEEEcCeEEECC
Confidence 3677788888877776 8999999999987766544 333322344 34579999999999
Q ss_pred CCChhh
Q 008258 234 GAGSTV 239 (572)
Q Consensus 234 G~~S~V 239 (572)
|..|.+
T Consensus 214 GG~~~~ 219 (621)
T 2h88_A 214 GGYGRT 219 (621)
T ss_dssp CCCGGG
T ss_pred Cccccc
Confidence 999865
No 94
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.86 E-value=1.5e-08 Score=100.85 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=76.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
+||+||||||+|+++|..|++.|++|+|||+.+... .. +. +.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~--------------------~~---------~~--~~------- 44 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN--------------------RF---------AS--HS------- 44 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG--------------------GG---------CS--CC-------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc--------------------cc---------ch--hh-------
Confidence 799999999999999999999999999999865210 00 00 00
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
. .+ +. ....+...+...+.+.+.+.+. ++++ ..++++++.+
T Consensus 45 -~-------------~~-----~~-~~~~~~~~~~~~~~~~~~~~~~------------------v~~~-~~~v~~i~~~ 85 (297)
T 3fbs_A 45 -H-------------GF-----LG-QDGKAPGEIIAEARRQIERYPT------------------IHWV-EGRVTDAKGS 85 (297)
T ss_dssp -C-------------SS-----TT-CTTCCHHHHHHHHHHHHTTCTT------------------EEEE-ESCEEEEEEE
T ss_pred -c-------------CC-----cC-CCCCCHHHHHHHHHHHHHhcCC------------------eEEE-EeEEEEEEEc
Confidence 0 00 00 0123345666677777766521 2444 4589999988
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 204 ~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
++++++++. +++ ++++|+||.|+|.++..
T Consensus 86 ~~~~~v~~~---~g~----~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 86 FGEFIVEID---GGR----RETAGRLILAMGVTDEL 114 (297)
T ss_dssp TTEEEEEET---TSC----EEEEEEEEECCCCEEEC
T ss_pred CCeEEEEEC---CCC----EEEcCEEEECCCCCCCC
Confidence 888777664 453 68999999999997644
No 95
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.86 E-value=7.6e-09 Score=104.45 Aligned_cols=114 Identities=19% Similarity=0.236 Sum_probs=76.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+.++||+||||||+|+++|+.|++.|++|+||||.. + + +. + .. .... .
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~---g-g~------------~-~~-------~~~~---~---- 61 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A---G-GL------------T-AE-------APLV---E---- 61 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T---T-GG------------G-GG-------CSCB---C----
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C---C-cc------------c-cc-------cchh---h----
Confidence 346899999999999999999999999999999842 1 1 10 0 00 0000 0
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.+ ... ..+....+...|.+.+.+.|+ ++++ .+++++
T Consensus 62 ------------------~~----~~~--~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i 97 (319)
T 3cty_A 62 ------------------NY----LGF--KSIVGSELAKLFADHAANYAK-------------------IREG-VEVRSI 97 (319)
T ss_dssp ------------------CB----TTB--SSBCHHHHHHHHHHHHHTTSE-------------------EEET-CCEEEE
T ss_pred ------------------hc----CCC--cccCHHHHHHHHHHHHHHcCC-------------------EEEE-eeEEEE
Confidence 00 000 123345666677777777776 6666 688888
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+.+++.++++. ++. ++.+|+||.|+|.++.
T Consensus 98 ~~~~~~~~v~~----~~~----~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 98 KKTQGGFDIET----NDD----TYHAKYVIITTGTTHK 127 (319)
T ss_dssp EEETTEEEEEE----SSS----EEEEEEEEECCCEEEC
T ss_pred EEeCCEEEEEE----CCC----EEEeCEEEECCCCCcc
Confidence 88777766543 232 5889999999998654
No 96
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.85 E-value=2.7e-07 Score=99.80 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=34.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..+||+|||||++||++|..|++.|++|+|+|+++.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3579999999999999999999999999999998765
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.84 E-value=2.4e-08 Score=106.81 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=30.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
||+|||||++||++|+.|++.|.+|+||||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999998
No 98
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.83 E-value=2.8e-09 Score=108.60 Aligned_cols=115 Identities=18% Similarity=0.313 Sum_probs=75.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+..+||+||||||+|+++|+.|++.|++|+|||+.. + . |.+ . ....
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----g----------------g~~---~-~~~~--------- 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-F----G----------------GAL---M-TTTD--------- 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-C----S----------------CGG---G-SCSC---------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-C----C----------------Cce---e-ccch---------
Confidence 445899999999999999999999999999999641 1 1 100 0 0000
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
. . .+ |.....+....+...|.+.+.+.|+ ++++++ ++++
T Consensus 58 --------~---~-----~~-----~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~~~-v~~i 96 (335)
T 2a87_A 58 --------V---E-----NY-----PGFRNGITGPELMDEMREQALRFGA-------------------DLRMED-VESV 96 (335)
T ss_dssp --------B---C-----CS-----TTCTTCBCHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEE
T ss_pred --------h---h-----hc-----CCCCCCCCHHHHHHHHHHHHHHcCC-------------------EEEEee-EEEE
Confidence 0 0 00 0000123455666777777777776 777776 7788
Q ss_pred eeeCCeEEE-EEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 201 SATDQCINV-IASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 201 ~~~~~~v~v-~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+. ++.+++ ++. ++. ++++|+||.|+|.++.
T Consensus 97 ~~-~~~~~v~~~~---~g~----~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 97 SL-HGPLKSVVTA---DGQ----THRARAVILAMGAAAR 127 (335)
T ss_dssp EC-SSSSEEEEET---TSC----EEEEEEEEECCCEEEC
T ss_pred Ee-CCcEEEEEeC---CCC----EEEeCEEEECCCCCcc
Confidence 76 455555 432 443 6899999999998764
No 99
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.82 E-value=3.6e-09 Score=106.74 Aligned_cols=114 Identities=18% Similarity=0.312 Sum_probs=76.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
..+||+||||||+|+++|+.|++.|++|+|||+. .+ .+. + -. ....
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~----gg~------------~-~~-------~~~~--------- 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EK----GGQ------------L-TT-------TTEV--------- 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-ST----TGG------------G-GG-------CSBC---------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CC----Cce------------E-ec-------chhh---------
Confidence 4589999999999999999999999999999964 11 110 0 00 0000
Q ss_pred eCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
. . + |.....+....+...+.+.+.+.|+ ++++++ ++.++
T Consensus 50 ---~-----~--------~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~-v~~i~ 88 (320)
T 1trb_A 50 ---E-----N--------W-----PGDPNDLTGPLLMERMHEHATKFET-------------------EIIFDH-INKVD 88 (320)
T ss_dssp ---C-----C--------S-----TTCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEEE
T ss_pred ---h-----h--------C-----CCCCCCCCHHHHHHHHHHHHHHCCC-------------------EEEEee-eeEEE
Confidence 0 0 0 0000123445666677777777776 777776 88888
Q ss_pred eeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 202 ~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
.+++.+++ +. ++. ++.+|+||.|+|.++.
T Consensus 89 ~~~~~~~v-~~---~~~----~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 89 LQNRPFRL-NG---DNG----EYTCDALIIATGASAR 117 (320)
T ss_dssp CSSSSEEE-EE---SSC----EEEEEEEEECCCEEEC
T ss_pred ecCCEEEE-Ee---CCC----EEEcCEEEECCCCCcC
Confidence 77777766 43 443 6889999999998754
No 100
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.82 E-value=5.1e-08 Score=104.16 Aligned_cols=62 Identities=18% Similarity=0.275 Sum_probs=47.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCCCCC-------C-----Ce---eeeChhHHHHHHhhcchHHHH
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAFSTH-------P-----QA---HFINNRYALVFRKLDGLAEEI 105 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~G--i~v~viEr~~~~~~~-------~-----~a---~~l~~rt~e~l~~l~Gl~~~l 105 (572)
.+||+|||||++||++|+.|++.| ++|+|+|+.+.+.-. + .+ ....+...++++++ |+.+++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~l-g~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAI-GLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHT-TCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHc-CCcceE
Confidence 479999999999999999999999 999999997654211 0 11 11246778888888 876544
No 101
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.80 E-value=2.1e-08 Score=103.30 Aligned_cols=140 Identities=16% Similarity=0.242 Sum_probs=80.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
++||+||||||+|+++|..|++.|+ +|+|||+.+ +. + .+...+. ....... .+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G----g---------~~~~~~~----------~~~~~~~-~~~ 58 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG----H---------SFKHWPK----------STRTITP-SFT 58 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT----H---------HHHTSCT----------TCBCSSC-CCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC----C---------ccccCcc----------cccccCc-chh
Confidence 5799999999999999999999999 999999986 21 1 0000000 0000000 000
Q ss_pred eCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
...-|-. ............ . ......+.+..+...|.+.+++.|+ +++++++|++++
T Consensus 59 ~~~~g~~--~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~i~~~~~v~~i~ 115 (369)
T 3d1c_A 59 SNGFGMP--DMNAISMDTSPA-F-TFNEEHISGETYAEYLQVVANHYEL-------------------NIFENTVVTNIS 115 (369)
T ss_dssp CGGGTCC--CTTCSSTTCCHH-H-HHCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEE
T ss_pred cccCCch--hhhhcccccccc-c-cccccCCCHHHHHHHHHHHHHHcCC-------------------eEEeCCEEEEEE
Confidence 0000000 000000000000 0 0001123445666777777777776 888999999998
Q ss_pred eeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 202 ~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
.++++++|+.. ++ ++.+|.||.|.|..+.
T Consensus 116 ~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 116 ADDAYYTIATT---TE-----TYHADYIFVATGDYNF 144 (369)
T ss_dssp ECSSSEEEEES---SC-----CEEEEEEEECCCSTTS
T ss_pred ECCCeEEEEeC---CC-----EEEeCEEEECCCCCCc
Confidence 87777766543 34 4789999999998763
No 102
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.77 E-value=1.2e-08 Score=114.95 Aligned_cols=37 Identities=41% Similarity=0.658 Sum_probs=34.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
...||+|||||++||++|..|++.|++|+|+|+.+.+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 3579999999999999999999999999999997654
No 103
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.76 E-value=1.9e-08 Score=100.95 Aligned_cols=112 Identities=19% Similarity=0.324 Sum_probs=74.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
+||+||||||+|+++|+.|++.|++|+|||+... |.+.. . . .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g----------------------G~~~~----~--~-~--------- 43 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG----------------------GQILD----T--V-D--------- 43 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT----------------------GGGGG----C--C-E---------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC----------------------ceecc----c--c-c---------
Confidence 7999999999999999999999999999986311 11000 0 0 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
+ . .+. . ....++..+...|.+.+.+.|+ +++++++++.++.+
T Consensus 44 -----~---~-----~~~----~--~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~~~v~~i~~~ 85 (310)
T 1fl2_A 44 -----I---E-----NYI----S--VPKTEGQKLAGALKVHVDEYDV-------------------DVIDSQSASKLIPA 85 (310)
T ss_dssp -----E---C-----CBT----T--BSSEEHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEEECC
T ss_pred -----c---c-----ccc----C--cCCCCHHHHHHHHHHHHHHcCC-------------------eEEccCEEEEEEec
Confidence 0 0 000 0 0012344666677777777766 88889999998764
Q ss_pred C---CeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 204 D---QCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 204 ~---~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
. +.+++++. +|. ++++|+||.|+|.++.
T Consensus 86 ~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 86 AVEGGLHQIETA---SGA----VLKARSIIVATGAKWR 116 (310)
T ss_dssp SSTTCCEEEEET---TSC----EEEEEEEEECCCEEEC
T ss_pred ccCCceEEEEEC---CCC----EEEeCEEEECcCCCcC
Confidence 3 25566553 443 6889999999998753
No 104
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.75 E-value=5.6e-08 Score=104.30 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=32.9
Q ss_pred CCCcccccCCCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 30 ALSDSKTIVSNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 30 ~~~~~~~~~~~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
..++.+...|++.++||+||||||+|+++|+.|+++|.+|+||||.
T Consensus 13 ~~~~~~~~~M~~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 13 EAQTQGPGSMGSFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp -----------CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCcCCCCCCcCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 3344443344445789999999999999999999999999999994
No 105
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.74 E-value=2e-07 Score=103.33 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=34.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHH---h-CCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLT---K-LGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La---~-~Gi~v~viEr~~~~ 78 (572)
..++||||||||++||++|+.|+ + .|.+|+||||.+..
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 35689999999999999999999 6 89999999998743
No 106
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.72 E-value=2.9e-08 Score=106.47 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=34.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+.++||+||||||+|+++|+.|++.|.+|+||||.+.+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34689999999999999999999999999999997553
No 107
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.72 E-value=7.6e-08 Score=96.54 Aligned_cols=36 Identities=25% Similarity=0.512 Sum_probs=32.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
|.++||+||||||||+++|+.|+|+|.+|+|||+..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 567999999999999999999999999999999863
No 108
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.71 E-value=3.7e-08 Score=105.05 Aligned_cols=33 Identities=33% Similarity=0.623 Sum_probs=31.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
++||+||||||+|+++|+.|++.|++|+||||.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 479999999999999999999999999999997
No 109
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.64 E-value=4.5e-08 Score=104.85 Aligned_cols=37 Identities=32% Similarity=0.583 Sum_probs=33.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+||||||+|+++|+.|++.|++|+||||.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 4589999999999999999999999999999996543
No 110
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.64 E-value=8e-08 Score=104.00 Aligned_cols=115 Identities=16% Similarity=0.314 Sum_probs=77.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
+..+||+||||||+|+++|+.|++.|++|+|+|++.. +... ... ++ .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G------G~~~--------~~~-~~--------------~---- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG------GQVL--------DTV-DI--------------E---- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT------GGGT--------TCS-CB--------------C----
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC------Cccc--------ccc-cc--------------c----
Confidence 3468999999999999999999999999999986311 0000 000 00 0
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.+. ..+ ......+...|.+.+.+.|+ +++++++++.+
T Consensus 257 ------------------~~~--~~~----~~~~~~l~~~l~~~~~~~gv-------------------~v~~~~~v~~i 293 (521)
T 1hyu_A 257 ------------------NYI--SVP----KTEGQKLAGALKAHVSDYDV-------------------DVIDSQSASKL 293 (521)
T ss_dssp ------------------CBT--TBS----SBCHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEE
T ss_pred ------------------ccC--CCC----CCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEE
Confidence 000 000 12345677778888877776 88889999998
Q ss_pred eee---CCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 201 SAT---DQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 201 ~~~---~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+.+ ++.+++++. +|. ++++|+||.|+|+++.
T Consensus 294 ~~~~~~~~~~~V~~~---~g~----~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 294 VPAATEGGLHQIETA---SGA----VLKARSIIIATGAKWR 327 (521)
T ss_dssp ECCSSTTSCEEEEET---TSC----EEEEEEEEECCCEEEC
T ss_pred EeccCCCceEEEEEC---CCC----EEEcCEEEECCCCCcC
Confidence 754 235666553 453 6899999999998653
No 111
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.61 E-value=5.5e-08 Score=104.65 Aligned_cols=34 Identities=38% Similarity=0.554 Sum_probs=30.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+|+|||||++||++|+.|+++|++|+|+|+++.+
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 7999999999999999999999999999999765
No 112
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.59 E-value=1.1e-07 Score=101.63 Aligned_cols=63 Identities=21% Similarity=0.250 Sum_probs=47.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCC------------eeee---ChhHHHHHHhhcchHHHH
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ------------AHFI---NNRYALVFRKLDGLAEEI 105 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~------------a~~l---~~rt~e~l~~l~Gl~~~l 105 (572)
..+||+|||||++||++|..|+++|++|+|+|+.+.+.-+-+ ++.+ .+...++++++ |+.+.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~-gl~~~~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAAL-NLEGRI 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHT-TCGGGE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHc-CCccee
Confidence 357999999999999999999999999999999876532111 1111 46778899998 876543
No 113
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.57 E-value=5.2e-07 Score=96.89 Aligned_cols=38 Identities=32% Similarity=0.640 Sum_probs=32.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
++++||+||||||+|+++|+.|++.|.+|+||||.+.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 34589999999999999999999999999999987543
No 114
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.57 E-value=4.2e-07 Score=97.79 Aligned_cols=64 Identities=11% Similarity=0.101 Sum_probs=48.9
Q ss_pred ccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCC--------eEEEEEEeccCCceeeE
Q 008258 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQ--------CINVIASFLKEGKCTER 222 (572)
Q Consensus 151 ~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~--------~v~v~~~~~~~g~~~~~ 222 (572)
..+|.++...|...+++.+. .|+|+++|++++..+. .++|+..+.++| ++.
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~-------------------~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g--~~~ 199 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSD-------------------VVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETG--EIS 199 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGG-------------------GEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTC--CEE
T ss_pred CCCHHHHHHHHHHHHHHcCC-------------------ceEcceEEEeeccccccccccccceEEEEEecCCCc--eEE
Confidence 45688888888888877543 7999999999986542 477877743333 566
Q ss_pred EEEecEEEeecCC
Q 008258 223 NIQCNILIGTDGA 235 (572)
Q Consensus 223 ~i~ad~vVgADG~ 235 (572)
+++|+.||-|-|.
T Consensus 200 ~~~ar~vVlatG~ 212 (501)
T 4b63_A 200 ARRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEeCEEEECcCC
Confidence 8999999999994
No 115
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.54 E-value=1.4e-07 Score=100.86 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=32.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~~~ 78 (572)
.||+|||||++||++|+.|+++|. +|+|+|+.+.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999997654
No 116
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=1.1e-07 Score=101.59 Aligned_cols=38 Identities=37% Similarity=0.589 Sum_probs=34.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+.++||+||||||+|+++|+.|++.|++|+||||.+.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34589999999999999999999999999999998654
No 117
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.50 E-value=8.4e-08 Score=96.32 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=32.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+||+||||||||+++|+.|+++|++|+|||+..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4899999999999999999999999999999865
No 118
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.47 E-value=7.1e-07 Score=89.32 Aligned_cols=111 Identities=19% Similarity=0.281 Sum_probs=73.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEE-EcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~v-iEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
.+||+||||||+||++|..|++.|++|+| +|| +.+ . |.+.. ....
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~----g----------------G~~~~----~~~~--------- 49 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMP----G----------------GQITS----SSEI--------- 49 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SST----T----------------GGGGG----CSCB---------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCC----C----------------ceeee----ecee---------
Confidence 47999999999999999999999999999 999 332 1 11000 0000
Q ss_pred eCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
. .+ |.....+....+...+.+.+.+.|+ +++++ +++++
T Consensus 50 --------~--------~~-----~~~~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~-~v~~i- 87 (315)
T 3r9u_A 50 --------E--------NY-----PGVAQVMDGISFMAPWSEQCMRFGL-------------------KHEMV-GVEQI- 87 (315)
T ss_dssp --------C--------CS-----TTCCSCBCHHHHHHHHHHHHTTTCC-------------------EEECC-CEEEE-
T ss_pred --------c--------cC-----CCCCCCCCHHHHHHHHHHHHHHcCc-------------------EEEEE-EEEEE-
Confidence 0 00 0001123456677777787877776 67777 88888
Q ss_pred eeC--CeEEEEEEeccCCceeeEEEEecEEEeecCCC
Q 008258 202 ATD--QCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (572)
Q Consensus 202 ~~~--~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~ 236 (572)
.++ +.+++++. ++. ++.+|+||-|.|..
T Consensus 88 ~~~~~~~~~v~~~---~~~----~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 88 LKNSDGSFTIKLE---GGK----TELAKAVIVCTGSA 117 (315)
T ss_dssp EECTTSCEEEEET---TSC----EEEEEEEEECCCEE
T ss_pred ecCCCCcEEEEEe---cCC----EEEeCEEEEeeCCC
Confidence 665 66665343 221 68999999999974
No 119
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.43 E-value=2.1e-08 Score=102.74 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC------CCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~G------i~v~viEr~~ 76 (572)
+||+|||||++||++|+.|+++| .+|+||||..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 38999999999999999999998 9999999986
No 120
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.38 E-value=5e-06 Score=88.87 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=33.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
+.++||+||||||+|+++|+.|++.|.+|+||||..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 456899999999999999999999999999999764
No 121
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.36 E-value=6.5e-07 Score=94.47 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~~ 77 (572)
.+||+||||||+|+++|..|++.|. +|+|||+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 4799999999999999999999998 7999998764
No 122
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.35 E-value=2.4e-07 Score=93.03 Aligned_cols=37 Identities=24% Similarity=0.549 Sum_probs=33.1
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 39 ~~~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
|++.+|||+||||||||+++|+.|++.|++|+||||.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 3456799999999999999999999999999999985
No 123
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.33 E-value=8.2e-07 Score=92.90 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=31.3
Q ss_pred CEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~---~Gi~v~viEr~~~ 77 (572)
+|+|||||++|+++|..|++ .|.+|+|||+.+.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 79999999999999999999 8999999999873
No 124
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.32 E-value=4.8e-07 Score=91.65 Aligned_cols=37 Identities=38% Similarity=0.552 Sum_probs=33.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHh--CCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~--~Gi~v~viEr~~~~ 78 (572)
.++||+||||||+||++|+.|++ .|++|+||||.+.+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 46799999999999999999975 59999999998765
No 125
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.31 E-value=1.9e-06 Score=94.72 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=33.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
..||+||||||+|+++|..|++. |.+|+||||.+.+
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 46899999999999999999998 8999999998765
No 126
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.29 E-value=2.9e-06 Score=90.98 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=33.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC---CCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLG---IKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~G---i~v~viEr~~~~ 78 (572)
++||+||||||+|+++|..|++.| .+|+|||+.+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 579999999999999999999998 999999998754
No 127
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=2.5e-06 Score=90.63 Aligned_cols=33 Identities=42% Similarity=0.668 Sum_probs=31.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
++||+||||||+|+++|..|++.|.+|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 479999999999999999999999999999997
No 128
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.28 E-value=2.5e-06 Score=90.94 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=33.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+||||||+|+++|..|++.|++|+||||.+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 3689999999999999999999999999999987653
No 129
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.27 E-value=1.8e-06 Score=91.53 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=32.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
+||+||||||+|+++|..|++. |.+|+|||+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4899999999999999999998 9999999998754
No 130
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.27 E-value=5.1e-06 Score=88.13 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=33.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFS 79 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~~ 79 (572)
.||+||||||+|+++|..|++. |.+|+|||+.+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5899999999999999999998 99999999988653
No 131
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.26 E-value=4.2e-07 Score=97.86 Aligned_cols=39 Identities=31% Similarity=0.534 Sum_probs=35.0
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 008258 40 NEAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (572)
Q Consensus 40 ~~~~~dVlIVGaGpaGL~~A~~La~~-Gi~v~viEr~~~~ 78 (572)
+..++||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 34568999999999999999999985 9999999999765
No 132
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.25 E-value=4.2e-06 Score=89.33 Aligned_cols=37 Identities=35% Similarity=0.593 Sum_probs=33.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+||||||+|+++|..|++.|.+|+|||+.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 4589999999999999999999999999999998653
No 133
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.23 E-value=3.4e-06 Score=87.47 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=33.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
++++|+||||||||+++|..|++.+.+|+|||+.+.+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 4579999999999999999998889999999998764
No 134
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.22 E-value=2.9e-06 Score=90.53 Aligned_cols=35 Identities=14% Similarity=0.322 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
.||+||||||+|+++|..|++. |.+|+||||.+.+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 5899999999999999999999 9999999998765
No 135
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.21 E-value=1.5e-05 Score=85.15 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=32.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
+.++||+||||||+|+++|+.|++.|.+|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 34689999999999999999999999999999963
No 136
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.21 E-value=2.4e-06 Score=91.39 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=32.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
.||+||||||+|+++|..|++. |.+|+|||+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999997 9999999998754
No 137
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.20 E-value=4e-06 Score=87.85 Aligned_cols=37 Identities=30% Similarity=0.417 Sum_probs=33.6
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~--v~viEr~~~~ 78 (572)
.++||+|||||++|+++|..|++.|.+ |+|||+.+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 457999999999999999999999987 9999998754
No 138
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.20 E-value=7.1e-06 Score=87.04 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=76.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+ +.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-------------------~~--------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-------------------TM--------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-------------------cc---------------------
Confidence 35799999999999999999999999999998765421 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
...+.+.|.+.+++.|+ ++++++++++++.
T Consensus 207 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~~ 236 (455)
T 2yqu_A 207 -------------------------------DLEVSRAAERVFKKQGL-------------------TIRTGVRVTAVVP 236 (455)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEECCEEEEEEE
Confidence 01223345566666776 8999999999998
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
+++++.+++. +|+ ++.+|.||.|.|.++..
T Consensus 237 ~~~~v~v~~~---~g~----~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 237 EAKGARVELE---GGE----VLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred eCCEEEEEEC---CCe----EEEcCEEEECcCCCcCC
Confidence 8877766553 443 68999999999987654
No 139
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.19 E-value=6.9e-06 Score=85.09 Aligned_cols=101 Identities=21% Similarity=0.297 Sum_probs=77.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------~------------------------ 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------L------------------------ 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------T------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------------c------------------------
Confidence 357999999999999999999999999999987653210 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
....+.+.|.+.+++.|+ ++++++++++++.
T Consensus 185 ------------------------------~~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 215 (384)
T 2v3a_A 185 ------------------------------LHPAAAKAVQAGLEGLGV-------------------RFHLGPVLASLKK 215 (384)
T ss_dssp ------------------------------SCHHHHHHHHHHHHTTTC-------------------EEEESCCEEEEEE
T ss_pred ------------------------------cCHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEe
Confidence 001334456667777776 8999999999998
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
+++++.+++. +|+ ++++|.||.|.|.++..
T Consensus 216 ~~~~~~v~~~---~g~----~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 216 AGEGLEAHLS---DGE----VIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred cCCEEEEEEC---CCC----EEECCEEEECcCCCcCH
Confidence 8777766653 453 68999999999987653
No 140
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.17 E-value=5.8e-06 Score=87.53 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.8
Q ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
||+||||||+|+++|..|++. |.+|+|||+.+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 899999999999999999998 9999999998754
No 141
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.17 E-value=5.2e-06 Score=88.42 Aligned_cols=36 Identities=39% Similarity=0.636 Sum_probs=33.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
++||+||||||+|+++|+.|++.|.+|+|||+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998653
No 142
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.16 E-value=1.2e-05 Score=85.50 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=77.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------- 208 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ----------------G------------------------- 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc----------------c-------------------------
Confidence 57999999999999999999999999999997654210 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
...+.+.|.+.+++.|+ ++++++++++++.+
T Consensus 209 ------------------------------~~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~~ 239 (464)
T 2eq6_A 209 ------------------------------DPETAALLRRALEKEGI-------------------RVRTKTKAVGYEKK 239 (464)
T ss_dssp ------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEEE
T ss_pred ------------------------------CHHHHHHHHHHHHhcCC-------------------EEEcCCEEEEEEEe
Confidence 01233445666777776 89999999999988
Q ss_pred CCeEEEEEEeccC--CceeeEEEEecEEEeecCCChhh
Q 008258 204 DQCINVIASFLKE--GKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 204 ~~~v~v~~~~~~~--g~~~~~~i~ad~vVgADG~~S~V 239 (572)
++++.+++.. + | ++.++.+|.||.|.|.++.+
T Consensus 240 ~~~~~v~~~~--~~~g--~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 240 KDGLHVRLEP--AEGG--EGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp TTEEEEEEEE--TTCC--SCEEEEESEEEECSCEEESC
T ss_pred CCEEEEEEee--cCCC--ceeEEEcCEEEECCCcccCC
Confidence 7777776641 3 4 23468999999999976543
No 143
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.15 E-value=9.8e-06 Score=87.50 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=33.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
+.++||+||||||+|+++|+.|++.|.+|+||||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346899999999999999999999999999999975
No 144
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.13 E-value=2.7e-06 Score=90.07 Aligned_cols=38 Identities=37% Similarity=0.538 Sum_probs=34.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+.++||+|||||++||++|+.|++.|++|+|+|+++.+
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45689999999999999999999999999999998765
No 145
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.13 E-value=4.4e-06 Score=88.17 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~---~Gi~v~viEr~~~ 77 (572)
.||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 589999999999999999999 8999999999874
No 146
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.13 E-value=1.9e-06 Score=91.40 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=35.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+.++||+|||||++||++|..|++.|.+|+|+||++.+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 46 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 35689999999999999999999999999999999765
No 147
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.13 E-value=1.9e-06 Score=90.16 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=33.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~--v~viEr~~~~ 78 (572)
.++||+||||||+|+++|..|++.|.+ |+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 457999999999999999999999984 9999997653
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.09 E-value=7e-06 Score=86.95 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=32.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
.||+||||||+|+++|..|++. |.+|+|||+.+..
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 6899999999999999999998 8899999998755
No 149
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.09 E-value=7.1e-06 Score=89.55 Aligned_cols=35 Identities=17% Similarity=0.241 Sum_probs=32.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
.+|+||||||+|+++|..|++. |.+|+|||+.+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3799999999999999999998 8999999998765
No 150
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.08 E-value=4.3e-06 Score=88.77 Aligned_cols=35 Identities=46% Similarity=0.761 Sum_probs=32.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+||+||||||+|+++|..|++.|.+|+|||+.+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 69999999999999999999999999999998643
No 151
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.08 E-value=3.5e-06 Score=86.71 Aligned_cols=35 Identities=46% Similarity=0.616 Sum_probs=32.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
....||+|||||++||++|+.|+++|++|+|+|++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 34579999999999999999999999999999998
No 152
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=6.7e-06 Score=84.72 Aligned_cols=34 Identities=32% Similarity=0.485 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.||+||||||+|+++|..|++.| +|+|||+.+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 59999999999999999999999 99999998754
No 153
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.05 E-value=2.4e-05 Score=83.81 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=33.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..++||+||||||+|+++|+.|++.|.+|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 346899999999999999999999999999999854
No 154
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.05 E-value=3.8e-06 Score=88.52 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHh--CCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~--~Gi~v~viEr~~~~ 78 (572)
.||+|||||++|+++|..|++ .|++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 589999999999999999999 78999999998653
No 155
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.00 E-value=7.4e-06 Score=87.98 Aligned_cols=62 Identities=24% Similarity=0.375 Sum_probs=48.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCC------------Ceeee---ChhHHHHHHhhcchHHH
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP------------QAHFI---NNRYALVFRKLDGLAEE 104 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~------------~a~~l---~~rt~e~l~~l~Gl~~~ 104 (572)
..+||+|||||++||++|+.|+++|++|+|+|+++.+.-.- .++.+ .+..+++++++ |+.+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l-gl~~~ 88 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSL-GLREK 88 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHT-TCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHc-CCccc
Confidence 35799999999999999999999999999999997653211 11222 36788999999 87654
No 156
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.99 E-value=1.2e-05 Score=86.29 Aligned_cols=34 Identities=21% Similarity=0.488 Sum_probs=32.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~---Gi~v~viEr~~ 76 (572)
++||+||||||+|+++|..|++. |.+|+||||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 37999999999999999999999 99999999976
No 157
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.99 E-value=3.3e-06 Score=91.13 Aligned_cols=38 Identities=37% Similarity=0.507 Sum_probs=34.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~~~ 78 (572)
+...||+|||||++||++|..|+++| .+|+|+|+++.+
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 44579999999999999999999999 999999998754
No 158
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.98 E-value=1.6e-05 Score=82.98 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~~~ 78 (572)
.+|+|||||++|+++|..|++.|. +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 489999999999999999999998 89999998743
No 159
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.97 E-value=1.9e-05 Score=82.55 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCC--EEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~--v~viEr~~~~ 78 (572)
.+|+||||||+|+++|..|++.|.+ |+|||+.+.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 3899999999999999999999988 9999998764
No 160
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.97 E-value=9.9e-06 Score=86.91 Aligned_cols=37 Identities=27% Similarity=0.539 Sum_probs=33.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..++||+||||||+|+++|..|++. .+|+|||+.+.+
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~ 142 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL 142 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC
Confidence 3457999999999999999999999 999999998754
No 161
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.97 E-value=5.3e-06 Score=86.51 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=33.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~-Gi~v~viEr~~~~ 78 (572)
.++||+|||||++||++|..|++. |.+|+|+|+++.+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 468999999999999999999999 9999999998643
No 162
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.96 E-value=2.4e-05 Score=82.57 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=30.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~G--i~v~viEr~~~~ 78 (572)
+|+||||||+|+++|..|++.| .+|+|||+.+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 6999999999999999999998 579999997654
No 163
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.95 E-value=6.2e-06 Score=88.27 Aligned_cols=38 Identities=34% Similarity=0.541 Sum_probs=34.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+.+.||+|||||++||++|+.|++.|++|+|+|+.+.+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 44679999999999999999999999999999998764
No 164
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.94 E-value=3.4e-05 Score=81.72 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=73.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+ +
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------~~-~---------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP----------------SF-D---------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS-C----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh----------------hh-h----------------------
Confidence 35799999999999999999999999999998764310 00 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 208 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 236 (450)
T 1ges_A 208 --------------------------------PMISETLVEVMNAEGP-------------------QLHTNAIPKAVVK 236 (450)
T ss_dssp --------------------------------HHHHHHHHHHHHHHSC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0123345566667776 8899999999987
Q ss_pred eCCe-EEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 ~~~~-v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
++++ +.+++. +|+ ++.+|.||.|.|.++.
T Consensus 237 ~~~~~~~v~~~---~g~----~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 237 NTDGSLTLELE---DGR----SETVDCLIWAIGREPA 266 (450)
T ss_dssp CTTSCEEEEET---TSC----EEEESEEEECSCEEES
T ss_pred eCCcEEEEEEC---CCc----EEEcCEEEECCCCCcC
Confidence 6554 555553 553 6899999999997654
No 165
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.93 E-value=9.8e-05 Score=78.70 Aligned_cols=104 Identities=18% Similarity=0.336 Sum_probs=76.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. + +
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~-~---------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS----------------M-D---------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS----------------S-C----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc----------------c-C----------------------
Confidence 457999999999999999999999999999998654210 0 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 224 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 252 (478)
T 1v59_A 224 --------------------------------GEVAKATQKFLKKQGL-------------------DFKLSTKVISAKR 252 (478)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 1233445666677776 8999999999987
Q ss_pred --eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 203 --TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 --~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++.+.+++....+| ...++.+|.||.|.|....
T Consensus 253 ~~~~~~~~v~~~~~~~g--~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 253 NDDKNVVEIVVEDTKTN--KQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp ETTTTEEEEEEEETTTT--EEEEEEESEEEECSCEEEC
T ss_pred ecCCCeEEEEEEEcCCC--CceEEECCEEEECCCCCcC
Confidence 556666666522223 2346899999999997643
No 166
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=5.1e-05 Score=80.38 Aligned_cols=101 Identities=18% Similarity=0.375 Sum_probs=76.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+ ++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-------------------GF--------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-------------------cc---------------------
Confidence 45899999999999999999999999999998765420 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+ ..+.+.+.+.+++.|+ ++++++++++++.
T Consensus 210 ------------------------------~-~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 210 ------------------------------E-KQMAAIIKKRLKKKGV-------------------EVVTNALAKGAEE 239 (455)
T ss_dssp ------------------------------C-HHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEE
T ss_pred ------------------------------C-HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0 1223345566677776 8999999999998
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
+++++.+++. ++|+ ..++.+|.||.|.|.+.
T Consensus 240 ~~~~~~v~~~--~~g~--~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 240 REDGVTVTYE--ANGE--TKTIDADYVLVTVGRRP 270 (455)
T ss_dssp ETTEEEEEEE--ETTE--EEEEEESEEEECSCEEE
T ss_pred eCCeEEEEEE--eCCc--eeEEEcCEEEECcCCCc
Confidence 8777777665 1332 23689999999999764
No 167
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.93 E-value=7.9e-06 Score=85.67 Aligned_cols=37 Identities=30% Similarity=0.571 Sum_probs=34.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~~~ 78 (572)
.++||+|||||++||++|+.|+++| .+|+|+|+++.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4579999999999999999999999 999999998765
No 168
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.92 E-value=7.3e-06 Score=85.02 Aligned_cols=38 Identities=29% Similarity=0.390 Sum_probs=34.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
...+||+|||||++||++|..|++.|.+|+|+|+++.+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 45689999999999999999999999999999998653
No 169
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.88 E-value=0.00017 Score=76.36 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=84.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCCCCCCCe----eeeChhHHHHHHhhcchH--HHHHhcCCCccc
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQA----HFINNRYALVFRKLDGLA--EEIERSQPPVDL 114 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~~~~~~a----~~l~~rt~e~l~~l~Gl~--~~l~~~~~~~~~ 114 (572)
.-+|+|||||.+|+=+|..|++. |.+|++++|.+.+.+.... ...++...+.+..+ .-. ..+.+..... .
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l-~~~~~~~~~~~~~~~-~ 304 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSR-EHAERERLLREYHNT-N 304 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHS-CHHHHHHHHHHTGGG-T
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcC-CHHHHHHHHHHhhcc-C
Confidence 35799999999999999999999 9999999998876432211 12334444444443 111 1111100000 0
Q ss_pred ccceeeeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHh-cCceeeccCCcccccccccccceEEe
Q 008258 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILM 193 (572)
Q Consensus 115 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~i~~ 193 (572)
+ .... ..+.....+.+..+.+.. .| ++++.
T Consensus 305 -------------------------~----~~~~-~~~~~~~~~~l~~~~~~~~~~-------------------v~i~~ 335 (463)
T 3s5w_A 305 -------------------------Y----SVVD-TDLIERIYGVFYRQKVSGIPR-------------------HAFRC 335 (463)
T ss_dssp -------------------------S----SCBC-HHHHHHHHHHHHHHHHHCCCC-------------------SEEET
T ss_pred -------------------------C----CcCC-HHHHHHHHHHHHHHHhcCCCC-------------------eEEEe
Confidence 0 0000 000011112222222222 23 48999
Q ss_pred ccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCC
Q 008258 194 GHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (572)
Q Consensus 194 g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~ 236 (572)
+++|++++.+++++.+++....+| +++++.+|.||-|-|..
T Consensus 336 ~~~v~~v~~~~~~~~v~~~~~~~g--~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 336 MTTVERATATAQGIELALRDAGSG--ELSVETYDAVILATGYE 376 (463)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTC--CEEEEEESEEEECCCEE
T ss_pred CCEEEEEEecCCEEEEEEEEcCCC--CeEEEECCEEEEeeCCC
Confidence 999999999889988888754445 44579999999999965
No 170
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.88 E-value=1.3e-05 Score=84.45 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=30.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~G--i~v~viEr~~~ 77 (572)
+|+|||||++|+++|..|++.+ ++|+|||+++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 6999999999999999999875 88999998764
No 171
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.88 E-value=6.7e-06 Score=87.49 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=32.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr 74 (572)
..++||+||||||+|+++|+.|+++|.+|+||||
T Consensus 3 ~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 3 AFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 3468999999999999999999999999999999
No 172
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.83 E-value=7.4e-06 Score=87.84 Aligned_cols=36 Identities=25% Similarity=0.234 Sum_probs=33.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..++||+||||||+|+++|+.|++.|.+|+||||.+
T Consensus 6 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 6 VINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 446899999999999999999999999999999964
No 173
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.82 E-value=7.5e-05 Score=80.68 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=33.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|||+||||||+|+++|+.++++|.+|.|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 58999999999999999999999999999998764
No 174
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.82 E-value=9e-05 Score=78.72 Aligned_cols=99 Identities=19% Similarity=0.275 Sum_probs=74.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+ +
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~----------------~~-~----------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF----------------QF-D----------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS-C-----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc----------------cc-C-----------------------
Confidence 4799999999999999999999999999998764310 00 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
..+...|.+.+++.|+ ++++++++++++.+
T Consensus 207 -------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 207 -------------------------------PLLSATLAENMHAQGI-------------------ETHLEFAVAALERD 236 (463)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTC-------------------EEESSCCEEEEEEE
T ss_pred -------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEEe
Confidence 0122345566667776 89999999999987
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 204 ~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
++++.+++. +|+ + ++.+|.||.|.|.+..
T Consensus 237 ~~~~~v~~~---~G~--~-~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 237 AQGTTLVAQ---DGT--R-LEGFDSVIWAVGRAPN 265 (463)
T ss_dssp TTEEEEEET---TCC--E-EEEESEEEECSCEEES
T ss_pred CCeEEEEEe---CCc--E-EEEcCEEEECCCCCcC
Confidence 777666653 553 2 5899999999997653
No 175
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.82 E-value=2.4e-05 Score=83.88 Aligned_cols=38 Identities=34% Similarity=0.438 Sum_probs=34.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
....||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 34579999999999999999999999999999998755
No 176
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.81 E-value=1.2e-05 Score=85.93 Aligned_cols=37 Identities=38% Similarity=0.624 Sum_probs=34.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+||||||+|+++|+.|++.|.+|+||||.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 3589999999999999999999999999999998744
No 177
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.79 E-value=9.5e-05 Score=78.12 Aligned_cols=99 Identities=17% Similarity=0.291 Sum_probs=72.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeee
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (572)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... .+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~----------------------- 189 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV---------------YL----------------------- 189 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT---------------TC-----------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc---------------cC-----------------------
Confidence 3468999999999999999999999999999997653210 00
Q ss_pred eCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 122 ~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
...+.+.+.+.+++.|+ ++++++++++++
T Consensus 190 --------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~ 218 (447)
T 1nhp_A 190 --------------------------------DKEFTDVLTEEMEANNI-------------------TIATGETVERYE 218 (447)
T ss_dssp --------------------------------CHHHHHHHHHHHHTTTE-------------------EEEESCCEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHHhCCC-------------------EEEcCCEEEEEE
Confidence 01234456677777776 889999999998
Q ss_pred eeCCeE-EEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 202 ATDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 202 ~~~~~v-~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
.+ +.+ .+++ ++. ++++|.||.|.|.+..
T Consensus 219 ~~-~~v~~v~~----~~~----~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 219 GD-GRVQKVVT----DKN----AYDADLVVVAVGVRPN 247 (447)
T ss_dssp CS-SBCCEEEE----SSC----EEECSEEEECSCEEES
T ss_pred cc-CcEEEEEE----CCC----EEECCEEEECcCCCCC
Confidence 65 333 2332 332 6899999999997653
No 178
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=0.00012 Score=77.83 Aligned_cols=103 Identities=17% Similarity=0.345 Sum_probs=76.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. + +
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------------~-~---------------------- 217 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT----------------M-D---------------------- 217 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------S-C----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc----------------c-c----------------------
Confidence 357999999999999999999999999999988654210 0 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 218 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 246 (470)
T 1dxl_A 218 --------------------------------AEIRKQFQRSLEKQGM-------------------KFKLKTKVVGVDT 246 (470)
T ss_dssp --------------------------------HHHHHHHHHHHHHSSC-------------------CEECSEEEEEEEC
T ss_pred --------------------------------HHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEE
Confidence 1223345666677776 8999999999988
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
+++++.+++....+|+ ..++.+|.||.|.|...
T Consensus 247 ~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 247 SGDGVKLTVEPSAGGE--QTIIEADVVLVSAGRTP 279 (470)
T ss_dssp SSSSEEEEEEESSSCC--CEEEEESEEECCCCEEE
T ss_pred cCCeEEEEEEecCCCc--ceEEECCEEEECCCCCc
Confidence 7767777765321332 23689999999999764
No 179
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.77 E-value=0.00018 Score=76.52 Aligned_cols=103 Identities=17% Similarity=0.347 Sum_probs=75.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-------------------TL--------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-------------------cC---------------------
Confidence 35799999999999999999999999999998865421 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHH-HhcCceeeccCCcccccccccccceEEeccEEEEEe
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQL-EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~ 201 (572)
...+.+.|.+.+ ++.|+ ++++++++++++
T Consensus 214 -------------------------------d~~~~~~l~~~l~~~~gv-------------------~i~~~~~v~~i~ 243 (468)
T 2qae_A 214 -------------------------------DEDVTNALVGALAKNEKM-------------------KFMTSTKVVGGT 243 (468)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTCC-------------------EEECSCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHhhcCCc-------------------EEEeCCEEEEEE
Confidence 012234456666 67776 899999999999
Q ss_pred eeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 202 ~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
.+++++.+++.. .+| +..++.+|.||.|.|.++.
T Consensus 244 ~~~~~~~v~~~~-~~g--~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 244 NNGDSVSLEVEG-KNG--KRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp ECSSSEEEEEEC-C-----EEEEEESEEEECSCEEEC
T ss_pred EcCCeEEEEEEc-CCC--ceEEEECCEEEECCCcccC
Confidence 877777776641 123 2347899999999997653
No 180
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.76 E-value=0.00023 Score=75.71 Aligned_cols=104 Identities=18% Similarity=0.332 Sum_probs=76.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. .+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~------------------------ 218 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV---------------GI------------------------ 218 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS---------------SC------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc---------------cc------------------------
Confidence 357999999999999999999999999999988654210 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+ ..+.+.+.+.+++.|+ ++++++++++++.
T Consensus 219 ------------------------------~-~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 248 (474)
T 1zmd_A 219 ------------------------------D-MEISKNFQRILQKQGF-------------------KFKLNTKVTGATK 248 (474)
T ss_dssp ------------------------------C-HHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred ------------------------------C-HHHHHHHHHHHHHCCC-------------------EEEeCceEEEEEE
Confidence 0 1223345666777777 8999999999998
Q ss_pred eCCe-EEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~-v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
++++ +.+++....++ ...++.+|.||.|.|...
T Consensus 249 ~~~~~~~v~~~~~~~~--~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 249 KSDGKIDVSIEAASGG--KAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp CTTSCEEEEEEETTSC--CCEEEEESEEEECSCEEE
T ss_pred cCCceEEEEEEecCCC--CceEEEcCEEEECcCCCc
Confidence 7766 76666421122 123689999999999764
No 181
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.73 E-value=0.00011 Score=78.33 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=75.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~----------------~------------------------ 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG----------------A------------------------ 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc----------------c------------------------
Confidence 457999999999999999999999999999987653210 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+ ..+.+.+.+.+++.|+ ++++++++++++.
T Consensus 225 ------------------------------~-~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~ 254 (482)
T 1ojt_A 225 ------------------------------D-RDLVKVWQKQNEYRFD-------------------NIMVNTKTVAVEP 254 (482)
T ss_dssp ------------------------------C-HHHHHHHHHHHGGGEE-------------------EEECSCEEEEEEE
T ss_pred ------------------------------C-HHHHHHHHHHHHhcCC-------------------EEEECCEEEEEEE
Confidence 0 1223345566667776 8999999999998
Q ss_pred eCCeEEEEEEeccC-CceeeEEEEecEEEeecCCChh
Q 008258 203 TDQCINVIASFLKE-GKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 ~~~~v~v~~~~~~~-g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++++.+++.+.++ |+ ++.+|.||.|-|.+..
T Consensus 255 ~~~~~~v~~~~~~~~g~----~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 255 KEDGVYVTFEGANAPKE----PQRYDAVLVAAGRAPN 287 (482)
T ss_dssp ETTEEEEEEESSSCCSS----CEEESCEEECCCEEEC
T ss_pred cCCeEEEEEeccCCCce----EEEcCEEEECcCCCcC
Confidence 87777777761101 32 4789999999997653
No 182
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.73 E-value=1.9e-05 Score=81.37 Aligned_cols=35 Identities=37% Similarity=0.450 Sum_probs=32.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+||+|||||++||++|..|++.|.+|+|+|+++.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 68999999999999999999999999999998643
No 183
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.73 E-value=0.00014 Score=84.15 Aligned_cols=37 Identities=30% Similarity=0.499 Sum_probs=34.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+||||||+|+++|+.|++.|++|+|||+.+.+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999998654
No 184
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.72 E-value=2.4e-05 Score=83.70 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=34.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~~~ 78 (572)
+..+||+|||||++||++|..|++.| .+|+|+|+.+.+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 34689999999999999999999998 799999998754
No 185
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.70 E-value=2e-05 Score=84.25 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=32.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.++||+||||||+|+++|+.|++.|.+|+||||.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999973
No 186
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.69 E-value=2.2e-05 Score=81.27 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=33.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
++||+|||||++||++|..|++.|.+|+|+|+++.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 369999999999999999999999999999998654
No 187
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.69 E-value=0.00027 Score=74.98 Aligned_cols=101 Identities=20% Similarity=0.353 Sum_probs=75.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. + .
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------~---~-------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN----------------E---D-------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S---C--------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc----------------c---C--------------------
Confidence 357999999999999999999999999999987654210 0 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.+.+.+++.|+ ++++++++++++.
T Consensus 212 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 212 --------------------------------ADVSKEIEKQFKKLGV-------------------TILTATKVESIAD 240 (464)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEECSCEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHcCC-------------------EEEeCcEEEEEEE
Confidence 1222345566667776 8999999999988
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
+++++.+++. ++|+ ..++.+|.||-|-|...
T Consensus 241 ~~~~~~v~~~--~~g~--~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 241 GGSQVTVTVT--KDGV--AQELKAEKVLQAIGFAP 271 (464)
T ss_dssp CSSCEEEEEE--SSSC--EEEEEESEEEECSCEEE
T ss_pred cCCeEEEEEE--cCCc--eEEEEcCEEEECCCCCc
Confidence 7777766664 2342 34689999999999654
No 188
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.68 E-value=0.00014 Score=75.59 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~G--i~v~viEr~~~ 77 (572)
+|+||||||+|+++|..|++.| .+|+|||+++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 6999999999999999998875 68999998764
No 189
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.68 E-value=3.3e-05 Score=83.47 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=34.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+.++||+||||||+|+++|..|++.|.+|+|||+.+.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4568999999999999999999999999999999864
No 190
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.68 E-value=3.9e-05 Score=78.32 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=32.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.||+|||||++|+.+|+.|++.|++|+|+|+++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 58999999999999999999999999999998743
No 191
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.67 E-value=2.4e-05 Score=86.24 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=34.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~ 79 (572)
+.++||+|||||++|+++|+.|++.|++|+||||.+...
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 346899999999999999999999999999999987653
No 192
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.67 E-value=3.6e-05 Score=81.03 Aligned_cols=37 Identities=22% Similarity=0.377 Sum_probs=34.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+|||||++||++|..|++.|.+|+|+|+++.+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYY 41 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCc
Confidence 4589999999999999999999999999999998654
No 193
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.67 E-value=0.00036 Score=69.67 Aligned_cols=100 Identities=14% Similarity=0.202 Sum_probs=72.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. +
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------~----------------------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------------------E----------------------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------------C-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------------C-----------------------
Confidence 4799999999999999999999999999998754310 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
..+.+.|.+.+.+.|+ ++++++++++++.+
T Consensus 184 -------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~~ 213 (320)
T 1trb_A 184 -------------------------------KILIKRLMDKVENGNI-------------------ILHTNRTLEEVTGD 213 (320)
T ss_dssp -------------------------------HHHHHHHHHHHHTSSE-------------------EEECSCEEEEEEEC
T ss_pred -------------------------------HHHHHHHHHhcccCCe-------------------EEEcCceeEEEEcC
Confidence 0112234455666676 88999999999877
Q ss_pred CCeEE-EEEEeccC-CceeeEEEEecEEEeecCCCh
Q 008258 204 DQCIN-VIASFLKE-GKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 204 ~~~v~-v~~~~~~~-g~~~~~~i~ad~vVgADG~~S 237 (572)
++.++ +++....+ | ...++.+|.||-|-|...
T Consensus 214 ~~~v~~v~~~~~~~~g--~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 214 QMGVTGVRLRDTQNSD--NIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp SSSEEEEEEECCTTCC--CCEEEECSEEEECSCEEE
T ss_pred CCceEEEEEEeccCCC--ceEEEEcCEEEEEeCCCC
Confidence 65543 55552111 3 234789999999999654
No 194
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.67 E-value=3.5e-05 Score=81.68 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
...||+||||||+||++|..|++.|++|+|||+.+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 3479999999999999999999999999999998654
No 195
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.66 E-value=2.7e-05 Score=82.80 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=32.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
.++||+||||||+|+++|..|++.|.+|+|||+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 4589999999999999999999999999999996
No 196
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.65 E-value=0.00037 Score=74.54 Aligned_cols=101 Identities=18% Similarity=0.289 Sum_probs=74.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... + .
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------~---d-------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL----------------Q---D-------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC----------------C---C--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc----------------C---C--------------------
Confidence 457999999999999999999999999999998754210 0 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.+.+.+++. + ++++++++++++.
T Consensus 215 --------------------------------~~~~~~l~~~l~~~-V-------------------~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 215 --------------------------------EEMKRYAEKTFNEE-F-------------------YFDAKARVISTIE 242 (492)
T ss_dssp --------------------------------HHHHHHHHHHHHTT-S-------------------EEETTCEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHhhC-c-------------------EEEECCEEEEEEE
Confidence 01223344444443 4 8899999999998
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
+++++++++.. .+| ++.++.+|.||-|-|...
T Consensus 243 ~~~~v~v~~~~-~~G--~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 243 KEDAVEVIYFD-KSG--QKTTESFQYVLAATGRKA 274 (492)
T ss_dssp CSSSEEEEEEC-TTC--CEEEEEESEEEECSCCEE
T ss_pred cCCEEEEEEEe-CCC--ceEEEECCEEEEeeCCcc
Confidence 88888777652 134 234789999999999754
No 197
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.65 E-value=0.00042 Score=73.74 Aligned_cols=100 Identities=24% Similarity=0.343 Sum_probs=76.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.+ .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-------------------AV--------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-------------------cc---------------------
Confidence 45799999999999999999999999999998764310 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+ ..+.+.+.+.+++.|+ ++++++++++++.
T Consensus 220 ------------------------------~-~~~~~~l~~~l~~~Gv-------------------~v~~~~~v~~i~~ 249 (476)
T 3lad_A 220 ------------------------------D-EQVAKEAQKILTKQGL-------------------KILLGARVTGTEV 249 (476)
T ss_dssp ------------------------------C-HHHHHHHHHHHHHTTE-------------------EEEETCEEEEEEE
T ss_pred ------------------------------C-HHHHHHHHHHHHhCCC-------------------EEEECCEEEEEEE
Confidence 0 1233445666677776 8999999999998
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCC
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~ 236 (572)
+++++.+++. ++.+ +.++.+|.||-|-|..
T Consensus 250 ~~~~~~v~~~---~~~g-~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 250 KNKQVTVKFV---DAEG-EKSQAFDKLIVAVGRR 279 (476)
T ss_dssp CSSCEEEEEE---SSSE-EEEEEESEEEECSCEE
T ss_pred cCCEEEEEEE---eCCC-cEEEECCEEEEeeCCc
Confidence 8888888776 3322 3478999999999964
No 198
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.00023 Score=75.83 Aligned_cols=101 Identities=19% Similarity=0.232 Sum_probs=73.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+ .+ .
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~----------------~~---d-------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR----------------KF---D-------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT----------------TS---C--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc----------------cc---C--------------------
Confidence 35799999999999999999999999999998765320 00 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 226 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 254 (479)
T 2hqm_A 226 --------------------------------ECIQNTITDHYVKEGI-------------------NVHKLSKIVKVEK 254 (479)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEE
Confidence 1122345566667776 8999999999987
Q ss_pred eCCe--EEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 203 TDQC--INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 203 ~~~~--v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
++++ +.+++. +|+ .++.+|.||.|-|.+...
T Consensus 255 ~~~~~~~~v~~~---~G~---~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 255 NVETDKLKIHMN---DSK---SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CC-CCCEEEEET---TSC---EEEEESEEEECSCEEECC
T ss_pred cCCCcEEEEEEC---CCc---EEEEcCEEEECCCCCCcc
Confidence 6555 555553 552 268999999999976543
No 199
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.63 E-value=2.8e-05 Score=82.33 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=32.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
.++||+||||||+|+++|..|++.|.+|+||||.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4589999999999999999999999999999996
No 200
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.63 E-value=3.1e-05 Score=82.42 Aligned_cols=34 Identities=18% Similarity=0.446 Sum_probs=32.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
.++||+||||||+|+++|+.|++.|.+|+|||+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999999999999999999999999987
No 201
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.63 E-value=0.00021 Score=76.70 Aligned_cols=101 Identities=17% Similarity=0.270 Sum_probs=74.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+ .+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 215 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-------------------KF--------------------- 215 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-------------------TS---------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-------------------cc---------------------
Confidence 34799999999999999999999999999998765320 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+ ..+...+.+.+++.|+ ++++++++++++.
T Consensus 216 ------------------------------d-~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 245 (500)
T 1onf_A 216 ------------------------------D-ESVINVLENDMKKNNI-------------------NIVTFADVVEIKK 245 (500)
T ss_dssp ------------------------------C-HHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred ------------------------------c-hhhHHHHHHHHHhCCC-------------------EEEECCEEEEEEE
Confidence 0 1222345566777777 8899999999987
Q ss_pred eCCe-EEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 203 ~~~~-v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
++++ +.+++. +|+ + ++.+|.||-|-|.....
T Consensus 246 ~~~~~~~v~~~---~g~--~-~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 246 VSDKNLSIHLS---DGR--I-YEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp SSTTCEEEEET---TSC--E-EEEESEEEECCCBCCTT
T ss_pred cCCceEEEEEC---CCc--E-EEECCEEEECCCCCcCC
Confidence 6543 555543 553 1 38999999999976543
No 202
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.62 E-value=3.7e-05 Score=81.42 Aligned_cols=38 Identities=34% Similarity=0.468 Sum_probs=35.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+..+||+|||||++|+++|..|++.|.+|+|+||++..
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYY 55 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 35689999999999999999999999999999998754
No 203
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.62 E-value=2.8e-05 Score=82.68 Aligned_cols=34 Identities=26% Similarity=0.545 Sum_probs=32.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6899999999999999999999999999999975
No 204
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.61 E-value=3.8e-05 Score=82.47 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=32.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4799999999999999999999999999999974
No 205
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.60 E-value=0.00031 Score=73.31 Aligned_cols=100 Identities=18% Similarity=0.274 Sum_probs=75.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+... .+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~---------------~~------------------------ 192 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR---------------VA------------------------ 192 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT---------------TS------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh---------------hc------------------------
Confidence 357999999999999999999999999999987654210 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
...+.+.+.+.+++.|+ ++++++++++++.
T Consensus 193 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 222 (415)
T 3lxd_A 193 -------------------------------GEALSEFYQAEHRAHGV-------------------DLRTGAAMDCIEG 222 (415)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEETCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhCCC-------------------EEEECCEEEEEEe
Confidence 01334456666777787 8999999999988
Q ss_pred eCCeE-EEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 203 TDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 ~~~~v-~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++.+ .+++. +|+ ++.||.||-|-|....
T Consensus 223 ~~~~v~~v~l~---dG~----~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 223 DGTKVTGVRMQ---DGS----VIPADIVIVGIGIVPC 252 (415)
T ss_dssp SSSBEEEEEES---SSC----EEECSEEEECSCCEES
T ss_pred cCCcEEEEEeC---CCC----EEEcCEEEECCCCccC
Confidence 76665 34443 554 6899999999998654
No 206
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.59 E-value=0.00031 Score=75.32 Aligned_cols=99 Identities=16% Similarity=0.220 Sum_probs=75.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.+ .+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~--------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-------------------YE--------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-------------------CS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------cc---------------------
Confidence 45899999999999999999999999999998765421 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+ ..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 222 ------------------------------d-~~~~~~l~~~l~~~GV-------------------~i~~~~~V~~i~~ 251 (499)
T 1xdi_A 222 ------------------------------D-ADAALVLEESFAERGV-------------------RLFKNARAASVTR 251 (499)
T ss_dssp ------------------------------S-HHHHHHHHHHHHHTTC-------------------EEETTCCEEEEEE
T ss_pred ------------------------------C-HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0 1233445666777787 8999999999988
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++++.++.. +|+ ++++|.||-|-|.++.
T Consensus 252 ~~~~v~v~~~---~g~----~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 252 TGAGVLVTMT---DGR----TVEGSHALMTIGSVPN 280 (499)
T ss_dssp CSSSEEEEET---TSC----EEEESEEEECCCEEEC
T ss_pred eCCEEEEEEC---CCc----EEEcCEEEECCCCCcC
Confidence 7777665532 443 6899999999997654
No 207
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.58 E-value=0.00041 Score=72.15 Aligned_cols=108 Identities=16% Similarity=0.327 Sum_probs=78.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+... .
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~------------------~----------------------- 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR------------------V----------------------- 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT------------------T-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh------------------c-----------------------
Confidence 47999999999999999999999999999987643100 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
+ -..+.+.|.+.+++.|+ ++++++++++++.+
T Consensus 182 ----------------------------~-~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 213 (404)
T 3fg2_P 182 ----------------------------V-TPEISSYFHDRHSGAGI-------------------RMHYGVRATEIAAE 213 (404)
T ss_dssp ----------------------------S-CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEEE
T ss_pred ----------------------------c-CHHHHHHHHHHHHhCCc-------------------EEEECCEEEEEEec
Confidence 0 01334456677777787 88999999999887
Q ss_pred CCeEE-EEEEeccCCceeeEEEEecEEEeecCCChh--hhhhcCCcc
Q 008258 204 DQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGIDL 247 (572)
Q Consensus 204 ~~~v~-v~~~~~~~g~~~~~~i~ad~vVgADG~~S~--VR~~lg~~~ 247 (572)
++.++ +++. +|+ ++.||.||-|-|.... +-+.+|+..
T Consensus 214 ~~~v~~V~~~---dG~----~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 214 GDRVTGVVLS---DGN----TLPCDLVVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp TTEEEEEEET---TSC----EEECSEEEECCCEEECCHHHHHTTCCB
T ss_pred CCcEEEEEeC---CCC----EEEcCEEEECcCCccCHHHHHhCCCCC
Confidence 66653 4443 554 6899999999997543 234445443
No 208
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.58 E-value=0.00041 Score=73.73 Aligned_cols=98 Identities=20% Similarity=0.390 Sum_probs=75.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~-Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
-+|+|||||++|+-+|..|++. |.+|+++|+.+.+... .+
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~---------------~~------------------------ 200 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG---------------FT------------------------ 200 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT---------------TS------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc---------------cc------------------------
Confidence 5799999999999999999999 9999999987543110 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
...+.+.|.+.+++.|+ ++++++++++++.
T Consensus 201 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 230 (472)
T 3iwa_A 201 -------------------------------SKSLSQMLRHDLEKNDV-------------------VVHTGEKVVRLEG 230 (472)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEEc
Confidence 01334456667777777 8899999999988
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
+++.+++++. +|+ ++.+|.||-|-|...
T Consensus 231 ~~~~v~v~~~---~g~----~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 231 ENGKVARVIT---DKR----TLDADLVILAAGVSP 258 (472)
T ss_dssp SSSBEEEEEE---SSC----EEECSEEEECSCEEE
T ss_pred cCCeEEEEEe---CCC----EEEcCEEEECCCCCc
Confidence 7777777665 553 689999999999754
No 209
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.57 E-value=0.00034 Score=73.44 Aligned_cols=108 Identities=13% Similarity=0.281 Sum_probs=76.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... .+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---------------~~------------------------- 189 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER---------------VT------------------------- 189 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT---------------TS-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc---------------hh-------------------------
Confidence 47999999999999999999999999999987543110 00
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee-
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA- 202 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~- 202 (572)
+ ..+...+.+.+++.|+ ++++++++++++.
T Consensus 190 -----------------------------~-~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 220 (431)
T 1q1r_A 190 -----------------------------A-PPVSAFYEHLHREAGV-------------------DIRTGTQVCGFEMS 220 (431)
T ss_dssp -----------------------------C-HHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEEC
T ss_pred -----------------------------h-HHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEec
Confidence 0 1223345566677777 8899999999986
Q ss_pred -eCCeE-EEEEEeccCCceeeEEEEecEEEeecCCChh--hhhhcCCcc
Q 008258 203 -TDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGIDL 247 (572)
Q Consensus 203 -~~~~v-~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~--VR~~lg~~~ 247 (572)
+++.+ .+++. +|+ ++.+|.||.|.|.... +-+.+|+..
T Consensus 221 ~~~~~v~~v~~~---~G~----~i~~D~Vv~a~G~~p~~~l~~~~gl~~ 262 (431)
T 1q1r_A 221 TDQQKVTAVLCE---DGT----RLPADLVIAGIGLIPNCELASAAGLQV 262 (431)
T ss_dssp TTTCCEEEEEET---TSC----EEECSEEEECCCEEECCHHHHHTTCCB
T ss_pred cCCCcEEEEEeC---CCC----EEEcCEEEECCCCCcCcchhhccCCCC
Confidence 44444 34443 453 6899999999997543 334456544
No 210
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.56 E-value=0.0002 Score=74.76 Aligned_cols=109 Identities=25% Similarity=0.394 Sum_probs=77.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.+. ++ .++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l---------~~------~~~----------------------- 184 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL---------VR------VLG----------------------- 184 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------HH------HHC-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc---------hh------hcC-----------------------
Confidence 3579999999999999999999999999999876542 00 000
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.+.+.+++.|+ ++++++++++++.
T Consensus 185 --------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 213 (410)
T 3ef6_A 185 --------------------------------RRIGAWLRGLLTELGV-------------------QVELGTGVVGFSG 213 (410)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEC
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEec
Confidence 1223345566677777 8899999999987
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh--hhhhcCCcc
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGIDL 247 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~--VR~~lg~~~ 247 (572)
++....+++. +|+ ++.||.||-|-|.... +-+.+|+..
T Consensus 214 ~~~~~~v~~~---dg~----~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (410)
T 3ef6_A 214 EGQLEQVMAS---DGR----SFVADSALICVGAEPADQLARQAGLAC 253 (410)
T ss_dssp SSSCCEEEET---TSC----EEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred cCcEEEEEEC---CCC----EEEcCEEEEeeCCeecHHHHHhCCCcc
Confidence 6544455554 554 6899999999998654 234445443
No 211
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.53 E-value=5.4e-05 Score=84.63 Aligned_cols=38 Identities=34% Similarity=0.484 Sum_probs=34.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..+.||+||||||+||++|..|+++|++|+||||.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45679999999999999999999999999999998654
No 212
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.52 E-value=0.00022 Score=75.64 Aligned_cols=36 Identities=36% Similarity=0.576 Sum_probs=32.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 357999999999999999999999999999998654
No 213
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.51 E-value=6.1e-05 Score=79.93 Aligned_cols=33 Identities=36% Similarity=0.588 Sum_probs=31.6
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr 74 (572)
.++||+||||||+|+++|..|++.|.+|+|||+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 36 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG 36 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc
Confidence 458999999999999999999999999999998
No 214
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.51 E-value=0.00037 Score=74.01 Aligned_cols=97 Identities=18% Similarity=0.269 Sum_probs=72.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+++|+.+.+.+ +.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~---------------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------ED---------------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------SC----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------CC----------------------------------
Confidence 35799999999999999999999999999998765421 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 216 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 244 (467)
T 1zk7_A 216 --------------------------------PAIGEAVTAAFRAEGI-------------------EVLEHTQASQVAH 244 (467)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEETTCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCC-------------------EEEcCCEEEEEEE
Confidence 1223345566667776 8889999999988
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++.+.+++ ++. ++.+|.||-|-|.+..
T Consensus 245 ~~~~~~v~~----~~~----~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 245 MDGEFVLTT----THG----ELRADKLLVATGRTPN 272 (467)
T ss_dssp ETTEEEEEE----TTE----EEEESEEEECSCEEES
T ss_pred eCCEEEEEE----CCc----EEEcCEEEECCCCCcC
Confidence 766655543 231 6899999999998654
No 215
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.50 E-value=7.4e-05 Score=77.24 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=31.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~G--i~v~viEr~~ 76 (572)
++||+||||||+|+++|..|++.| .+|+|+|+.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 479999999999999999999998 5699999875
No 216
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.50 E-value=0.00043 Score=74.65 Aligned_cols=100 Identities=12% Similarity=0.265 Sum_probs=74.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.+.+. +
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~----------------~------------------------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI----------------K------------------------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC----------------C-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc----------------c-------------------------
Confidence 57999999999999999999999999999987654210 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
+ ..+...|.+.+++.|+ ++++++++++++.+
T Consensus 254 -----------------------------~-~~~~~~l~~~l~~~GV-------------------~i~~~~~V~~i~~~ 284 (523)
T 1mo9_A 254 -----------------------------D-NETRAYVLDRMKEQGM-------------------EIISGSNVTRIEED 284 (523)
T ss_dssp -----------------------------S-HHHHHHHHHHHHHTTC-------------------EEESSCEEEEEEEC
T ss_pred -----------------------------c-HHHHHHHHHHHHhCCc-------------------EEEECCEEEEEEEc
Confidence 0 1223446667777787 89999999999876
Q ss_pred CCe----EEEEEEeccCCceeeEEEEecEEEeecCCChhh
Q 008258 204 DQC----INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (572)
Q Consensus 204 ~~~----v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V 239 (572)
+++ +.+++. +|+ .++.||.||-|-|.++..
T Consensus 285 ~~~~v~~~~v~~~---~G~---~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 285 ANGRVQAVVAMTP---NGE---MRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp TTSBEEEEEEEET---TEE---EEEECSCEEECCCCEECC
T ss_pred CCCceEEEEEEEC---CCc---EEEEcCEEEECcCCccCC
Confidence 555 445442 441 368999999999987654
No 217
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.49 E-value=4.9e-05 Score=81.49 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~-~Gi~v~viEr 74 (572)
+.++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 346899999999999999999999 9999999995
No 218
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.49 E-value=0.00038 Score=74.54 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=73.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~---Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+.. .+ .
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~----------------~~---d----------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR----------------GF---D----------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT----------------TS---C-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc----------------cc---C-----------------
Confidence 35799999999999999999999 999999998765421 00 0
Q ss_pred eeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
..+...|.+.+++.|+ ++++++++++
T Consensus 235 -----------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 260 (495)
T 2wpf_A 235 -----------------------------------ETIREEVTKQLTANGI-------------------EIMTNENPAK 260 (495)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTTC-------------------EEEESCCEEE
T ss_pred -----------------------------------HHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 0223345566677777 8999999999
Q ss_pred EeeeCCe-EEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 200 v~~~~~~-v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
++.++++ +.+++. +|+ ++.+|.||.|-|.+.
T Consensus 261 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 261 VSLNTDGSKHVTFE---SGK----TLDVDVVMMAIGRIP 292 (495)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEE
T ss_pred EEEcCCceEEEEEC---CCc----EEEcCEEEECCCCcc
Confidence 9876543 555553 553 689999999999754
No 219
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.48 E-value=0.00036 Score=74.57 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=73.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~---Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+.+ .+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------------~~------------------ 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-------------------GF------------------ 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-------------------TS------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-------------------cc------------------
Confidence 35799999999999999999999 999999998765310 00
Q ss_pred eeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
+ ..+.+.|.+.+++.|+ ++++++++++
T Consensus 230 ---------------------------------d-~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 256 (490)
T 1fec_A 230 ---------------------------------D-SELRKQLTEQLRANGI-------------------NVRTHENPAK 256 (490)
T ss_dssp ---------------------------------C-HHHHHHHHHHHHHTTE-------------------EEEETCCEEE
T ss_pred ---------------------------------C-HHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 0 1223445666777776 8999999999
Q ss_pred EeeeCCe-EEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 200 v~~~~~~-v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
++.++++ +.+++. +|+ ++.+|.||.|-|.+.
T Consensus 257 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 257 VTKNADGTRHVVFE---SGA----EADYDVVMLAIGRVP 288 (490)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEE
T ss_pred EEEcCCCEEEEEEC---CCc----EEEcCEEEEccCCCc
Confidence 9876643 555543 553 689999999999754
No 220
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.47 E-value=7.4e-05 Score=81.13 Aligned_cols=37 Identities=32% Similarity=0.473 Sum_probs=34.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4589999999999999999999999999999998754
No 221
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.45 E-value=0.00072 Score=71.40 Aligned_cols=98 Identities=18% Similarity=0.324 Sum_probs=72.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... .+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~------------------------- 189 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK---------------YF------------------------- 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT---------------TS-------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh---------------hh-------------------------
Confidence 47999999999999999999999999999987654210 00
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
+ ..+...|.+.+++.|+ ++++++++++++.+
T Consensus 190 -----------------------------~-~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~~ 220 (452)
T 2cdu_A 190 -----------------------------D-KEFTDILAKDYEAHGV-------------------NLVLGSKVAAFEEV 220 (452)
T ss_dssp -----------------------------C-HHHHHHHHHHHHHTTC-------------------EEEESSCEEEEEEE
T ss_pred -----------------------------h-hhHHHHHHHHHHHCCC-------------------EEEcCCeeEEEEcC
Confidence 0 1233445666777787 89999999999875
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 204 ~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
++.++.. . . +|+ ++.+|.||-|-|...
T Consensus 221 ~~~v~~v-~-~-~g~----~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 221 DDEIITK-T-L-DGK----EIKSDIAILCIGFRP 247 (452)
T ss_dssp TTEEEEE-E-T-TSC----EEEESEEEECCCEEE
T ss_pred CCeEEEE-E-e-CCC----EEECCEEEECcCCCC
Confidence 6655422 2 1 343 689999999999754
No 222
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.45 E-value=0.00087 Score=67.24 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 47999999999999999999999999999987654
No 223
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.45 E-value=0.00062 Score=74.07 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||||++|+-+|..|++.|.+|+++|+.+.+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 37999999999999999999999999999987643
No 224
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.44 E-value=0.0013 Score=70.21 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=73.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+++++.... +.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l--------------------~~~d-------------------- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL--------------------RGFD-------------------- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------TTSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------ccCC--------------------
Confidence 347999999999999999999999999999975311 0100
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.+.+.+++.|+ ++++++++.+++.
T Consensus 225 --------------------------------~~~~~~l~~~l~~~gv-------------------~~~~~~~v~~i~~ 253 (488)
T 3dgz_A 225 --------------------------------QQMSSLVTEHMESHGT-------------------QFLKGCVPSHIKK 253 (488)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEEETEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 1223345566677776 8899999999987
Q ss_pred e-CCeEEEEEEeccCCceeeEEEEecEEEeecCCC
Q 008258 203 T-DQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (572)
Q Consensus 203 ~-~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~ 236 (572)
. ++.+.+++...++| ++.++.+|.||-|-|..
T Consensus 254 ~~~~~~~v~~~~~~~g--~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 254 LPTNQLQVTWEDHASG--KEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CTTSCEEEEEEETTTT--EEEEEEESEEEECSCEE
T ss_pred cCCCcEEEEEEeCCCC--eeEEEECCEEEEcccCC
Confidence 4 44566777632223 34468999999999954
No 225
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.43 E-value=9.5e-05 Score=78.67 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=32.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~~ 78 (572)
..+||+|||||++||++|..|++.|+ +|+|+|+.+.+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 35799999999999999999999999 89999998654
No 226
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.43 E-value=0.00063 Score=70.84 Aligned_cols=36 Identities=31% Similarity=0.513 Sum_probs=32.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.-+|+|||||++|+-+|..|++.|.+|+++|+.+.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 357999999999999999999999999999988653
No 227
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.42 E-value=0.00081 Score=70.99 Aligned_cols=97 Identities=22% Similarity=0.260 Sum_probs=73.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------~------------------------- 187 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY---------------F------------------------- 187 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT---------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc---------------C-------------------------
Confidence 479999999999999999999999999999876541100 0
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
+ ..+.+.+.+.+++.|+ ++++++++++++.+
T Consensus 188 -----------------------------d-~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 218 (452)
T 3oc4_A 188 -----------------------------D-KEMVAEVQKSLEKQAV-------------------IFHFEETVLGIEET 218 (452)
T ss_dssp -----------------------------C-HHHHHHHHHHHHTTTE-------------------EEEETCCEEEEEEC
T ss_pred -----------------------------C-HHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEcc
Confidence 0 1233456667777776 89999999999977
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 204 ~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
++++.+++. ++ ++.+|.||-|-|.+.
T Consensus 219 ~~~v~v~~~---~g-----~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 219 ANGIVLETS---EQ-----EISCDSGIFALNLHP 244 (452)
T ss_dssp SSCEEEEES---SC-----EEEESEEEECSCCBC
T ss_pred CCeEEEEEC---CC-----EEEeCEEEECcCCCC
Confidence 777755442 33 589999999999753
No 228
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.39 E-value=0.0005 Score=73.24 Aligned_cols=35 Identities=34% Similarity=0.616 Sum_probs=32.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 45899999999999999999999999999998754
No 229
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.39 E-value=8.1e-05 Score=79.69 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=30.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~-~Gi~v~viEr 74 (572)
++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 4899999999999999999999 9999999994
No 230
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.39 E-value=0.00012 Score=82.24 Aligned_cols=38 Identities=29% Similarity=0.428 Sum_probs=34.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
....||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34579999999999999999999999999999998754
No 231
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.39 E-value=9.8e-05 Score=81.10 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
...+||+||||||+|+++|..|++.|.+|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34589999999999999999999999999999984
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.39 E-value=0.0013 Score=65.97 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF 187 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc
Confidence 47999999999999999999999999999987643
No 233
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.38 E-value=0.00085 Score=72.41 Aligned_cols=100 Identities=19% Similarity=0.141 Sum_probs=75.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceee
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (572)
...-+++|||||+.|+=+|..+++.|.+|+|+++...+ ++..
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------------------~~~D------------------ 262 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------------------RGFD------------------ 262 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------TTSC------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------cccc------------------
Confidence 44458999999999999999999999999999864321 1111
Q ss_pred eeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEE
Q 008258 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (572)
Q Consensus 121 ~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v 200 (572)
.++...+.+.+++.|+ +++.+..+..+
T Consensus 263 ----------------------------------~ei~~~l~~~l~~~gi-------------------~~~~~~~v~~~ 289 (542)
T 4b1b_A 263 ----------------------------------QQCAVKVKLYMEEQGV-------------------MFKNGILPKKL 289 (542)
T ss_dssp ----------------------------------HHHHHHHHHHHHHTTC-------------------EEEETCCEEEE
T ss_pred ----------------------------------hhHHHHHHHHHHhhcc-------------------eeecceEEEEE
Confidence 1233456667777776 88999999999
Q ss_pred eeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 201 ~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+..++.+.+++. +++ ++.+|.|+.|-|.+-.
T Consensus 290 ~~~~~~~~v~~~---~~~----~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 290 TKMDDKILVEFS---DKT----SELYDTVLYAIGRKGD 320 (542)
T ss_dssp EEETTEEEEEET---TSC----EEEESEEEECSCEEES
T ss_pred EecCCeEEEEEc---CCC----eEEEEEEEEcccccCC
Confidence 999998887764 443 4679999999996543
No 234
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.37 E-value=0.0019 Score=64.12 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 5799999999999999999999999999998754
No 235
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.37 E-value=0.00089 Score=72.07 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
.-+|+|||||+.|+-+|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 346999999999999999999999999999974
No 236
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.35 E-value=0.00078 Score=68.61 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 47999999999999999999999999999987653
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.33 E-value=0.0011 Score=70.81 Aligned_cols=108 Identities=17% Similarity=0.286 Sum_probs=76.3
Q ss_pred CCEEEECCCHHHHHHHHHHHh----CCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCccccccee
Q 008258 44 VPVLIVGAGPVGLVLSILLTK----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~----~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~ 119 (572)
-+|+|||||+.|+-+|..|++ .|.+|+++++.+.+... .+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~---------------~l--------------------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK---------------IL--------------------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT---------------TS---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc---------------cC---------------------
Confidence 479999999999999999987 48899999876532100 00
Q ss_pred eeeCCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEE
Q 008258 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (572)
Q Consensus 120 ~~~~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~ 199 (572)
+ ..+.+.+.+.+++.|+ ++++++++++
T Consensus 225 ---------------------------------~-~~~~~~~~~~l~~~GV-------------------~v~~~~~V~~ 251 (493)
T 1m6i_A 225 ---------------------------------P-EYLSNWTMEKVRREGV-------------------KVMPNAIVQS 251 (493)
T ss_dssp ---------------------------------C-HHHHHHHHHHHHTTTC-------------------EEECSCCEEE
T ss_pred ---------------------------------C-HHHHHHHHHHHHhcCC-------------------EEEeCCEEEE
Confidence 0 1233445666777777 8999999999
Q ss_pred EeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh--hhhhcCCcc
Q 008258 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGIDL 247 (572)
Q Consensus 200 v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~--VR~~lg~~~ 247 (572)
++.+++.+.+++. +|+ ++.||.||.|-|.... +-+.+|+..
T Consensus 252 i~~~~~~~~v~l~---dG~----~i~aD~Vv~a~G~~pn~~l~~~~gl~~ 294 (493)
T 1m6i_A 252 VGVSSGKLLIKLK---DGR----KVETDHIVAAVGLEPNVELAKTGGLEI 294 (493)
T ss_dssp EEEETTEEEEEET---TSC----EEEESEEEECCCEEECCTTHHHHTCCB
T ss_pred EEecCCeEEEEEC---CCC----EEECCEEEECCCCCccHHHHHHcCCcc
Confidence 9877776666553 553 6899999999997653 333445543
No 238
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.33 E-value=0.0015 Score=64.75 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 47999999999999999999999999999987643
No 239
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.30 E-value=0.00016 Score=80.30 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=34.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
....||+||||||+||++|..|++.|++|+|+|+.+.+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 34579999999999999999999999999999998654
No 240
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.30 E-value=0.0001 Score=78.00 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=33.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHh-C------CCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTK-L------GIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~-~------Gi~v~viEr~~~~ 78 (572)
.+||+||||||+|+.+|..|++ . |++|+|||+.+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4689999999999999999999 7 9999999998654
No 241
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.29 E-value=0.00016 Score=80.45 Aligned_cols=38 Identities=24% Similarity=0.452 Sum_probs=34.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
....||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34579999999999999999999999999999998754
No 242
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.28 E-value=0.0011 Score=70.71 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=32.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 357999999999999999999999999999987654
No 243
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.27 E-value=0.0002 Score=81.32 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=34.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
...+|+||||||+||++|+.|+++|++|+|+|+.+.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 3569999999999999999999999999999998765
No 244
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.26 E-value=0.00016 Score=77.93 Aligned_cols=38 Identities=21% Similarity=0.363 Sum_probs=33.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~-~Gi~v~viEr~~~~ 78 (572)
..++|+||||||++|+.+|..|++ .|++|+|||+.+..
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 346999999999999999999998 68999999998653
No 245
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.24 E-value=0.00032 Score=76.65 Aligned_cols=40 Identities=30% Similarity=0.309 Sum_probs=35.9
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCC
Q 008258 39 SNEAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (572)
Q Consensus 39 ~~~~~~dVlIVGaGpaGL~~A~~La~-~Gi~v~viEr~~~~ 78 (572)
|.+.++|++|||||++|+++|..|++ .|.+|+|||+....
T Consensus 20 ~~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 20 VAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 34567999999999999999999999 79999999998754
No 246
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.20 E-value=0.00014 Score=78.65 Aligned_cols=37 Identities=32% Similarity=0.395 Sum_probs=33.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..++|+||||||++|+++|..|++ |.+|+|+|+.+..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 356899999999999999999999 9999999998753
No 247
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.19 E-value=0.00019 Score=76.82 Aligned_cols=37 Identities=16% Similarity=0.436 Sum_probs=33.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
..+||+||||||+|+++|..|++. |.+|+|||+.+.+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 457999999999999999999887 8999999998754
No 248
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.17 E-value=0.00023 Score=75.53 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=33.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~G--i~v~viEr~~~~ 78 (572)
.+||+||||||+|+.+|..|++.| ++|+|||+.+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 469999999999999999999998 999999998765
No 249
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.16 E-value=0.003 Score=62.92 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 4799999999999999999999999999998653
No 250
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.14 E-value=0.00029 Score=82.12 Aligned_cols=37 Identities=24% Similarity=0.522 Sum_probs=33.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~~ 78 (572)
...||+||||||+|+++|..|++.|+ +|+|||+.+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 35799999999999999999999999 79999997643
No 251
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.12 E-value=0.0011 Score=70.89 Aligned_cols=58 Identities=22% Similarity=0.315 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCC
Q 008258 156 KLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGA 235 (572)
Q Consensus 156 ~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~ 235 (572)
.+...+.+.+++.|+ ++++++++++++. +++.+.... .+|+..++++.||+||-|-|.
T Consensus 273 ~~~~~~~~~L~~~GV-------------------~v~~~~~v~~v~~--~~~~~~~~~-~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 273 KLSSYAQSHLENTSI-------------------KVHLRTAVAKVEE--KQLLAKTKH-EDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHTTC-------------------EEETTEEEEEECS--SEEEEEEEC-TTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHhcce-------------------eeecCceEEEEeC--CceEEEEEe-cCcccceeeeccCEEEEccCC
Confidence 344556677788887 8999999999864 555555442 355545668999999999985
No 252
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.12 E-value=0.00028 Score=76.83 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=33.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~~ 77 (572)
..++|+||||||.||+++|..|++.| .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 34699999999999999999999997 89999999876
No 253
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.11 E-value=0.0013 Score=67.31 Aligned_cols=35 Identities=26% Similarity=0.484 Sum_probs=32.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 57999999999999999999999999999988654
No 254
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.10 E-value=0.0023 Score=67.78 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=72.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. .+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~-------------------~~--------------------- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS-------------------RF--------------------- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------TS---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------cc---------------------
Confidence 45799999999999999999999999999998764310 00
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
+ ..+.+.|.+.+++.|+ +++.++++++++.
T Consensus 210 ------------------------------~-~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 239 (463)
T 4dna_A 210 ------------------------------D-QDMRRGLHAAMEEKGI-------------------RILCEDIIQSVSA 239 (463)
T ss_dssp ------------------------------C-HHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred ------------------------------C-HHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEE
Confidence 0 1233456667777787 8899999999988
Q ss_pred eCCe-EEEE-EEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQC-INVI-ASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~-v~v~-~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
++++ +.++ + ++| ++.+|.||-|-|...
T Consensus 240 ~~~~~~~v~~~---~~g-----~i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 240 DADGRRVATTM---KHG-----EIVADQVMLALGRMP 268 (463)
T ss_dssp CTTSCEEEEES---SSC-----EEEESEEEECSCEEE
T ss_pred cCCCEEEEEEc---CCC-----eEEeCEEEEeeCccc
Confidence 7665 4444 3 244 288999999999754
No 255
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.05 E-value=0.0058 Score=60.98 Aligned_cols=35 Identities=20% Similarity=0.463 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTL 187 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcC
Confidence 47999999999999999999999999999987543
No 256
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.03 E-value=0.0034 Score=62.88 Aligned_cols=35 Identities=29% Similarity=0.559 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 47999999999999999999999999999987653
No 257
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.03 E-value=0.00041 Score=74.46 Aligned_cols=37 Identities=24% Similarity=0.468 Sum_probs=34.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.++||+|||+|++|+++|..|++.|.+|+|||+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4689999999999999999999999999999998743
No 258
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.03 E-value=0.0029 Score=64.31 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=29.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 37999999999999999999999999999987543
No 259
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.97 E-value=0.00032 Score=77.60 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=33.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC--------CCEEEEcCCC-CC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLG--------IKCSVLEKNK-AF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~G--------i~v~viEr~~-~~ 78 (572)
..+|+|||||++||++|..|++.| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999987 55
No 260
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.95 E-value=0.0005 Score=74.86 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=33.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNK 76 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~-Gi~v~viEr~~ 76 (572)
...+|+||||||.||+++|..|++. |.+|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4569999999999999999999975 89999999987
No 261
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.94 E-value=0.00062 Score=73.80 Aligned_cols=38 Identities=16% Similarity=0.323 Sum_probs=34.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~-Gi~v~viEr~~~~ 78 (572)
...+||+|||||++|+++|..|++. |.+|+|||+....
T Consensus 11 ~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 11 DREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 3569999999999999999999998 9999999998654
No 262
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.94 E-value=0.00063 Score=73.03 Aligned_cols=38 Identities=32% Similarity=0.586 Sum_probs=34.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..++|++|||+|++|+++|..|++.|.+|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 34689999999999999999999999999999998643
No 263
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.92 E-value=0.0033 Score=68.64 Aligned_cols=105 Identities=18% Similarity=0.321 Sum_probs=75.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeeeC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (572)
-+|+|||||++|+-+|..|++.|.+|+++|+.+.+.+ .+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~---------------------- 226 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-------------------PI---------------------- 226 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------TS----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-------------------cC----------------------
Confidence 4799999999999999999999999999998764321 00
Q ss_pred CCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeee
Q 008258 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (572)
Q Consensus 124 ~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~ 203 (572)
...+...|.+.+++.|+ ++++++++++++.+
T Consensus 227 ------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 257 (588)
T 3ics_A 227 ------------------------------DYEMAAYVHEHMKNHDV-------------------ELVFEDGVDALEEN 257 (588)
T ss_dssp ------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEGG
T ss_pred ------------------------------CHHHHHHHHHHHHHcCC-------------------EEEECCeEEEEecC
Confidence 01223345566667776 88899999999876
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEeecCCChhh--hhhcCCcc
Q 008258 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV--RKLVGIDL 247 (572)
Q Consensus 204 ~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~V--R~~lg~~~ 247 (572)
+++ +++. +|+ ++.+|.||-|-|..... -+.+|+..
T Consensus 258 ~~~--v~~~---~g~----~i~~D~Vi~a~G~~p~~~~l~~~g~~~ 294 (588)
T 3ics_A 258 GAV--VRLK---SGS----VIQTDMLILAIGVQPESSLAKGAGLAL 294 (588)
T ss_dssp GTE--EEET---TSC----EEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred CCE--EEEC---CCC----EEEcCEEEEccCCCCChHHHHhcCceE
Confidence 554 3333 453 68999999999976542 33445543
No 264
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.89 E-value=0.0067 Score=59.94 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 57999999999999999999999999999987543
No 265
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.88 E-value=0.0042 Score=65.75 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.-+|+|||||++|+-+|..|++.|.+|+++++.+.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 357999999999999999999999999999987654
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.87 E-value=0.0079 Score=59.57 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 57999999999999999999999999999987654
No 267
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.87 E-value=0.00048 Score=73.81 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=33.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..+.+|||||||++|+++|..|++.+++|+|||+++.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 3456899999999999999999999999999998753
No 268
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.85 E-value=0.0027 Score=66.69 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 47999999999999999999999999999987653
No 269
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.83 E-value=0.0094 Score=65.18 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
-+|+|||||++|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 37999999999999999999999999999986
No 270
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.83 E-value=0.0072 Score=60.21 Aligned_cols=34 Identities=18% Similarity=0.391 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 4799999999999999999999999999998754
No 271
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.82 E-value=0.0049 Score=64.87 Aligned_cols=35 Identities=17% Similarity=0.424 Sum_probs=32.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||||++|+-+|..|++.|.+|+++|+.+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 47999999999999999999999999999987643
No 272
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.81 E-value=0.0012 Score=72.16 Aligned_cols=39 Identities=10% Similarity=0.288 Sum_probs=35.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~ 79 (572)
.+++||+|||+|..|..+|..|++.|.+|++|||++...
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYG 44 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCccc
Confidence 347999999999999999999999999999999998753
No 273
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.78 E-value=0.00051 Score=74.57 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=32.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~-~Gi~v~viEr~~~~ 78 (572)
.+|+||||||++|+++|..|++ .|++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 69999999998654
No 274
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.77 E-value=0.0056 Score=61.49 Aligned_cols=34 Identities=12% Similarity=0.368 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 5799999999999999999999999999998754
No 275
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.68 E-value=0.0072 Score=64.96 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||||++|+-+|..|++.|.+|+++++.+.+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 47999999999999999999999999999987543
No 276
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.55 E-value=0.0017 Score=70.24 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=40.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHH
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~ 96 (572)
.-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.........-+.+...+.|+
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 231 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIK 231 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHH
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHH
Confidence 357999999999999999999999999999999873211112335555566665
No 277
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.48 E-value=0.0037 Score=67.55 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=40.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHH
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~ 96 (572)
.-+|+|||+|++|+-+|..|++.+.+|+|++|.+.........-+.+...+.|+
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 238 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLR 238 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHH
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHH
Confidence 347999999999999999999999999999999864211122334555556665
No 278
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.10 E-value=0.019 Score=63.92 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=31.4
Q ss_pred CCEEEEC--CCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVG--aGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+||| +|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 3599999 9999999999999999999999987543
No 279
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.08 E-value=0.028 Score=59.21 Aligned_cols=35 Identities=20% Similarity=0.434 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--------------------CC-CEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--------------------GI-KCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--------------------Gi-~v~viEr~~~~ 78 (572)
-+|+|||+|.+|+-+|..|++. |. +|+|++|+...
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 4799999999999999999974 65 89999988643
No 280
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.07 E-value=0.042 Score=57.89 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHH--------------------hCCC-CEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLT--------------------KLGI-KCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La--------------------~~Gi-~v~viEr~~~~ 78 (572)
-+|+|||+|.+|+=+|..|+ +.|. +|+|++|+...
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 57999999999999999999 6788 69999988643
No 281
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.01 E-value=0.0049 Score=54.58 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..|+|+|+|..|..+|..|.+.|++|+++|+++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 47999999999999999999999999999987653
No 282
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.95 E-value=0.008 Score=52.24 Aligned_cols=35 Identities=31% Similarity=0.398 Sum_probs=32.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+-.|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999754
No 283
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.89 E-value=0.0066 Score=62.54 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=33.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~ 79 (572)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 589999999999999999999999999999988764
No 284
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.65 E-value=0.021 Score=55.74 Aligned_cols=33 Identities=12% Similarity=0.324 Sum_probs=29.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.-+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 357999999999999999999999 999987654
No 285
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.60 E-value=0.014 Score=51.38 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999874
No 286
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.59 E-value=0.008 Score=51.67 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999854
No 287
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.52 E-value=0.0083 Score=64.86 Aligned_cols=54 Identities=11% Similarity=0.154 Sum_probs=39.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHH
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~ 96 (572)
.-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.........-+.+...+.|+
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~ 244 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQK 244 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHH
Confidence 347999999999999999999999999999998864111112335555566665
No 288
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.42 E-value=0.012 Score=50.94 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 379999999999999999999999999999864
No 289
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.08 E-value=0.016 Score=47.97 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~ 76 (572)
..|+|+|+|..|..++..|.+.| .+|++++|.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999999999999999999999 8999999864
No 290
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.07 E-value=0.017 Score=57.17 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=32.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||||+.|+=+|..|++.|.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 37999999999999999999999999999998765
No 291
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.01 E-value=0.2 Score=52.24 Aligned_cols=55 Identities=15% Similarity=0.090 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEeeeCCeEEEEEEeccCCc-eeeEEEEecEEEeecCC
Q 008258 159 KLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGK-CTERNIQCNILIGTDGA 235 (572)
Q Consensus 159 ~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~-~~~~~i~ad~vVgADG~ 235 (572)
+.+.+.+++.|+ ++++++++++++. ++++++.... +|. .+..++.+|+||-|-|.
T Consensus 212 ~~~~~~l~~~gI-------------------~~~~~~~v~~v~~--~~v~~~~~~~-~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 212 GILTKGLKEEGI-------------------EAYTNCKVTKVED--NKMYVTQVDE-KGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHTTC-------------------EEECSEEEEEEET--TEEEEEEECT-TSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHCCC-------------------EEEcCCEEEEEEC--CeEEEEeccc-CCccccceEEEEeEEEEcCCC
Confidence 445566777777 8899999998864 4554443322 232 12457899999999873
No 292
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=94.98 E-value=0.058 Score=62.32 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSI 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc
Confidence 47999999999999999999999999999987643
No 293
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.93 E-value=0.12 Score=57.08 Aligned_cols=27 Identities=30% Similarity=0.496 Sum_probs=24.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEE
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCS 70 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~ 70 (572)
-+|+|||||++|+-+|..|++.|.+|.
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 579999999999999999999987654
No 294
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.89 E-value=0.022 Score=48.99 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.|+|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 295
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.88 E-value=0.1 Score=58.31 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCEEEEC--CCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVG--aGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
-+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999876
No 296
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.86 E-value=0.069 Score=56.17 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~-v~viEr~~~~ 78 (572)
-+|+|||||.+|+=+|..+.+.|.+ |++++|++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 4799999999999999999999985 9999987643
No 297
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.71 E-value=0.025 Score=51.42 Aligned_cols=35 Identities=26% Similarity=0.213 Sum_probs=31.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~-Gi~v~viEr~~~ 77 (572)
...|+|+|+|..|..+|..|.+. |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 34799999999999999999999 999999998653
No 298
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.67 E-value=0.23 Score=57.78 Aligned_cols=32 Identities=16% Similarity=0.307 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
+|+|||||.+|+=+|..|++.|. +|+|+++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999999997 899999875
No 299
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.61 E-value=0.03 Score=56.34 Aligned_cols=37 Identities=16% Similarity=0.262 Sum_probs=32.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
....+|.|||||-.|.++|..|++.|+ +|+++|+.++
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 334689999999999999999999998 9999998754
No 300
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.49 E-value=0.032 Score=55.20 Aligned_cols=33 Identities=15% Similarity=0.370 Sum_probs=30.7
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 599999999999999999999999999998754
No 301
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.25 E-value=0.028 Score=52.70 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=31.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998754
No 302
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.21 E-value=0.034 Score=54.85 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=32.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987654
No 303
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.29 E-value=0.07 Score=54.15 Aligned_cols=35 Identities=29% Similarity=0.505 Sum_probs=31.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..+|.|||+|-.|.++|..|++.|.+|.+++|.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999998643
No 304
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.21 E-value=0.11 Score=48.87 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=30.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
...|+|||||.+|...|..|.+.|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 458999999999999999999999999999864
No 305
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.16 E-value=0.071 Score=53.20 Aligned_cols=32 Identities=31% Similarity=0.614 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
.+|+|||+|-.|.++|..|++.|.+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47999999999999999999999999999985
No 306
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.13 E-value=0.083 Score=52.71 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=30.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~~ 77 (572)
...+|.|||+|-+|.++|..|+..|+ +++++|....
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKE 43 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChH
Confidence 34689999999999999999999998 8999998753
No 307
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.04 E-value=0.083 Score=52.57 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=31.6
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
...+|.|||+|..|.++|..|++.|+ +++++|+.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 34579999999999999999999999 999999863
No 308
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=93.02 E-value=0.35 Score=50.14 Aligned_cols=43 Identities=16% Similarity=-0.048 Sum_probs=29.5
Q ss_pred CcEEEEecccccCCCC-------CCCCchhHHHHHHHHHHHHHHHhcCCC
Q 008258 359 NQIILAGDACHRFPPA-------GGFGMNTGVQDAHNLAWKIASVLKDIA 401 (572)
Q Consensus 359 grV~LiGDAAH~~~P~-------~G~G~n~ai~DA~~La~~La~~~~g~~ 401 (572)
.+|+.+||+++..+|. .-.=...|+..+..+|..|...++|..
T Consensus 287 ~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 287 KNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp TTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6889999988865421 011234678888888888888777653
No 309
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.88 E-value=0.077 Score=51.92 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|.|||+|.-|...|..|++.|++|+++|+.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 3699999999999999999999999999998753
No 310
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.83 E-value=0.1 Score=52.40 Aligned_cols=32 Identities=38% Similarity=0.470 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
.+|+|||+|-.|.++|..|++.|.+|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999974
No 311
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.74 E-value=0.088 Score=54.02 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=32.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|+|+|+|++|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998865
No 312
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.63 E-value=0.093 Score=52.11 Aligned_cols=32 Identities=34% Similarity=0.564 Sum_probs=29.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
.+|+|||+|-.|.++|..|++.|.+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999985
No 313
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.62 E-value=0.095 Score=52.21 Aligned_cols=34 Identities=12% Similarity=0.365 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
..|.|||+|-.|.++|..|++.|+ +|+++|+.+.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 479999999999999999999998 9999998753
No 314
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.54 E-value=0.086 Score=52.47 Aligned_cols=34 Identities=29% Similarity=0.465 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-+|.|||||.-|...|..+++.|++|+++|..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999997653
No 315
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.49 E-value=0.089 Score=55.25 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|||.|.+|+++|..|+++|++|.+.|+++
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 479999999999999999999999999999875
No 316
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.48 E-value=0.074 Score=55.62 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..|+|||.|++|+++|..|+++|++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 46999999999999999999999999999987654
No 317
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.46 E-value=0.1 Score=55.15 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=33.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~ 79 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+++.+.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 3579999999999999999999999999999987653
No 318
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.46 E-value=0.042 Score=57.90 Aligned_cols=34 Identities=26% Similarity=0.426 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+.|+|+|+|-.|..+|..|...|++|+|||+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999864
No 319
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.45 E-value=0.085 Score=52.15 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=31.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..+|.|||+|-.|..+|..|++.|++|++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 320
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.43 E-value=0.11 Score=50.65 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=30.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|.|||+|..|.++|..|++.|++|.+++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 599999999999999999999999999998764
No 321
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.33 E-value=0.1 Score=54.10 Aligned_cols=34 Identities=32% Similarity=0.526 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|+|||+|..|..+|..|.+.|++|++||+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999865
No 322
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.32 E-value=0.1 Score=51.71 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=31.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||.|-.|..+|..|++.|++|++++|.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 323
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.31 E-value=0.095 Score=50.28 Aligned_cols=34 Identities=32% Similarity=0.471 Sum_probs=31.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
...|+|||+|..|..+|..|++.|+ +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999998 799999875
No 324
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.28 E-value=0.13 Score=47.83 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||+|-.|.++|..|++.|.+|.+++|.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999998865
No 325
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.17 E-value=0.11 Score=51.05 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=33.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..+|.|||.|-.|..+|..|++.|++|+++++.+..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 358999999999999999999999999999998754
No 326
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.16 E-value=0.11 Score=51.80 Aligned_cols=35 Identities=34% Similarity=0.492 Sum_probs=30.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~ 75 (572)
....+|.|||+|..|.++|..|+..|+ +++++|..
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 334679999999999999999999997 89999975
No 327
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.11 E-value=0.09 Score=52.45 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=31.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..+|.|||.|-.|..+|..|++.|++|++++|.+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 35799999999999999999999999999998754
No 328
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.90 E-value=0.14 Score=51.01 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
.+|.|||||-.|.++|..|+..|+ +|+++|..+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 479999999999999999999998 9999998743
No 329
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.88 E-value=0.13 Score=51.98 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+|.|||+|-.|...|..|++.|++|.+++|.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999998764
No 330
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.81 E-value=0.13 Score=51.10 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
.+|+|||+|-.|.++|..|++.|+ +|+++|+.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999998 999999864
No 331
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.79 E-value=0.15 Score=51.09 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
.+|.|||||-.|.++|..|++.|+ +|+++|..++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 479999999999999999999999 9999998754
No 332
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.74 E-value=0.12 Score=50.91 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+|+|||+|-.|.+.|..|++.|.+|.+++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 333
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.68 E-value=0.11 Score=52.96 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=32.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|+|+|+|.+|+.+|..|...|.+|+++|+++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998854
No 334
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.67 E-value=0.12 Score=54.35 Aligned_cols=35 Identities=23% Similarity=0.092 Sum_probs=32.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
-+|+|||||++|+=+|..|++.|.+|+|+++++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 47999999999999999999999999999987653
No 335
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.64 E-value=0.13 Score=51.29 Aligned_cols=34 Identities=29% Similarity=0.465 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|.|||+|.-|...|..|++.|++|+++|+.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999998754
No 336
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.60 E-value=0.12 Score=54.82 Aligned_cols=103 Identities=20% Similarity=0.356 Sum_probs=78.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------~~d-------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-------------------GMD-------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-------------------SSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-------------------cCC--------------------
Confidence 35799999999999999999999999999998765421 000
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.+.+.+++.|+ +++.++++++++.
T Consensus 239 --------------------------------~~~~~~l~~~l~~~gV-------------------~v~~~~~v~~i~~ 267 (491)
T 3urh_A 239 --------------------------------GEVAKQLQRMLTKQGI-------------------DFKLGAKVTGAVK 267 (491)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCC-------------------EEEECCeEEEEEE
Confidence 1223345566667776 8999999999999
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
+++++.+++...++| ++.++.+|.||-|-|...
T Consensus 268 ~~~~~~v~~~~~~~g--~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 268 SGDGAKVTFEPVKGG--EATTLDAEVVLIATGRKP 300 (491)
T ss_dssp ETTEEEEEEEETTSC--CCEEEEESEEEECCCCEE
T ss_pred eCCEEEEEEEecCCC--ceEEEEcCEEEEeeCCcc
Confidence 888888888743334 234789999999999653
No 337
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.53 E-value=0.16 Score=53.10 Aligned_cols=35 Identities=20% Similarity=0.033 Sum_probs=32.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~-v~viEr~~~~ 78 (572)
-+|+|||||++|+=+|..|++.|.+ |+|++|.+..
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999997654
No 338
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.50 E-value=0.15 Score=50.33 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=30.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 69999999999999999999999999999864
No 339
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.49 E-value=0.14 Score=54.06 Aligned_cols=35 Identities=31% Similarity=0.546 Sum_probs=32.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.++|.|||+|-.|+.+|..|++.|++|+++|+.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 35799999999999999999999999999998753
No 340
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.48 E-value=0.2 Score=49.66 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||+|..|...|..|++.|++|.++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 341
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.47 E-value=0.12 Score=54.13 Aligned_cols=34 Identities=26% Similarity=0.564 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||+|-.|+.+|..|++.|++|+++|+.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4799999999999999999999999999998754
No 342
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.43 E-value=0.065 Score=46.51 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|+|||+|..|..+|..|++.|++|.+++|.+.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 4799999999999999999999999999998743
No 343
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.38 E-value=0.16 Score=52.15 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=31.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|+|+|+|++|+.+|..+...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998764
No 344
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.28 E-value=0.1 Score=50.66 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=30.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
...|+|||||.+|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3579999999999999999999999999998643
No 345
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.27 E-value=0.2 Score=46.74 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|.|||+|-.|...|..|++.|++|.+++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 346
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.24 E-value=0.17 Score=52.86 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=33.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.+.+.|||.|-.|+.+|..|++.|++|+++|+++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 478999999999999999999999999999998764
No 347
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.23 E-value=0.11 Score=51.36 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=29.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-CCEEEEcC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL-----G-IKCSVLEK 74 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~-----G-i~v~viEr 74 (572)
.+|.|||+|..|.++|..|++. | .+|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 348
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.14 E-value=2.6 Score=44.09 Aligned_cols=44 Identities=20% Similarity=0.300 Sum_probs=35.4
Q ss_pred ceEEeccEEEEEeeeCCeEEEEEEeccCCceeeEEEEecEEEeecCCC
Q 008258 189 REILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (572)
Q Consensus 189 ~~i~~g~~v~~v~~~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~ 236 (572)
.+|+++++|++|+.++++|+|++. +|. ...+++||.||.|-..+
T Consensus 252 ~~i~~~~~V~~i~~~~~~v~v~~~---~g~-~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVSEGVTVEYT---AGG-SKKSITADYAICTIPPH 295 (489)
T ss_dssp GGEETTCEEEEEEEETTEEEEEEE---ETT-EEEEEEESEEEECSCHH
T ss_pred CeEEECCEEEEEEEcCCeEEEEEe---cCC-eEEEEECCEEEECCCHH
Confidence 379999999999999999888776 332 23478999999999764
No 349
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.01 E-value=0.2 Score=50.00 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
.+|.|||||..|.++|..|+..|+ +++++|..+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 579999999999999999999999 9999998764
No 350
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.00 E-value=0.17 Score=52.16 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|+|+|+|.+|+.+|..+...|.+|+++|+++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999998754
No 351
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.84 E-value=0.17 Score=51.46 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
-.|+|+|+|.+|+.++..|+..|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 352
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.80 E-value=0.19 Score=49.70 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
+|+|||||-.|.++|..|++.|+ +|+++|+.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999998 899999864
No 353
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.61 E-value=0.2 Score=52.76 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhC-CC-CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL-GI-KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~-Gi-~v~viEr~~~ 77 (572)
.+|.|||+|-.|+.+|..|++. |+ +|+++|+.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 354
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.37 E-value=0.25 Score=47.51 Aligned_cols=33 Identities=24% Similarity=0.555 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~-v~viEr~~ 76 (572)
..|.|||+|-.|...|..|++.|++ |.++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 88998754
No 355
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.35 E-value=0.077 Score=50.18 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=29.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr 74 (572)
..+|.|||+|..|.++|..|++.|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 35799999999999999999999999999988
No 356
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.35 E-value=0.26 Score=49.15 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
.+|.|||+|..|.++|..|++.|+ ++.++|..+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 479999999999999999999988 9999998754
No 357
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.30 E-value=0.29 Score=48.30 Aligned_cols=35 Identities=20% Similarity=0.482 Sum_probs=31.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..+|.|||.|-.|..+|..|++.|++|++++|.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 358
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.21 E-value=0.26 Score=49.52 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|.|||.|.-|.++|..|++.|++|.++++.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 359
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.14 E-value=0.25 Score=49.02 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~ 77 (572)
+|.|||+|-.|.++|..|++. |.+|+++|+.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 599999999999999999985 789999999754
No 360
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.00 E-value=0.16 Score=47.53 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEE-EcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~v-iEr~~~ 77 (572)
.+|.|||+|-.|.++|..|++.|++|++ ++|.++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 4799999999999999999999999998 887654
No 361
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.91 E-value=0.25 Score=48.90 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=29.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+|+|||+|-.|.+.|..|+ .|.+|.+++|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999864
No 362
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.88 E-value=0.31 Score=51.51 Aligned_cols=34 Identities=15% Similarity=0.319 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|.|||+|.-|...|..|++.|++|+++|+.++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 4799999999999999999999999999998754
No 363
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.86 E-value=0.28 Score=48.64 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
.+|.|||||-.|..+|..|+..|+ +++++|..+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999864
No 364
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.86 E-value=0.21 Score=49.74 Aligned_cols=32 Identities=28% Similarity=0.466 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+|+|||+|-.|.++|..|++.|.+|+++ +++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 47999999999999999999999999999 653
No 365
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.83 E-value=0.17 Score=52.73 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=30.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|.|||+|-.|+.+|..|++.|++|+++|+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 599999999999999999999999999998653
No 366
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.75 E-value=0.12 Score=48.75 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=30.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3469999999999999999999999 999998764
No 367
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.69 E-value=0.31 Score=48.35 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
.+|.|||.|-.|..+|..|++.|+ +|+++++.+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 479999999999999999999999 999999874
No 368
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.68 E-value=0.23 Score=50.36 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=32.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...+|.|||.|-.|..+|..|++.|++|++++|.+.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 345799999999999999999999999999998753
No 369
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.67 E-value=0.24 Score=49.45 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHH-HHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLV-LSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~-~A~~La~~Gi~v~viEr~~~ 77 (572)
..|.|||.|.+|++ +|..|+++|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36999999999996 89999999999999998764
No 370
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.64 E-value=0.23 Score=48.66 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+|.|||+|..|...|..|++.|++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 371
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.64 E-value=0.25 Score=48.27 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=31.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|.|||+|-.|..+|..|++.|++|++++|.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998765
No 372
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.55 E-value=0.22 Score=51.61 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||+|-.|+.+|..|++ |++|+++|+.+.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 479999999999999999999 999999998754
No 373
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.48 E-value=0.33 Score=48.34 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=31.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC----CCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~G----i~v~viEr~~~ 77 (572)
..+|.|||+|-.|.++|..|++.| .+|.+++|.+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 357999999999999999999999 79999998754
No 374
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.37 E-value=0.29 Score=48.55 Aligned_cols=33 Identities=33% Similarity=0.368 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
..|.|||+|..|.++|..|++.|+ +|.++++.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 479999999999999999999999 899999864
No 375
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.35 E-value=0.29 Score=48.96 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=31.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
++.+|.|||+|-.|.++|..|++.|.+|.+++|.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34689999999999999999999999999999863
No 376
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.31 E-value=0.28 Score=50.94 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|.|||.|-+||.+|..|++.|++|+.+|.++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 4799999999999999999999999999998754
No 377
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.25 E-value=0.3 Score=51.03 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|.|||+|.-|...|..|++.|++|+++|+.++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3699999999999999999999999999999865
No 378
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.20 E-value=0.29 Score=49.78 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|+|+|..|+.+|..|+..|.+|+++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999998764
No 379
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.15 E-value=0.44 Score=48.57 Aligned_cols=35 Identities=26% Similarity=0.460 Sum_probs=31.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|+|+|+|..|..++.++++.|++|++++..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 34699999999999999999999999999997654
No 380
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.12 E-value=0.23 Score=48.85 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
+|.|||+|..|.++|..|++.|+ ++.++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 59999999999999999999998 899999864
No 381
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.02 E-value=0.31 Score=47.77 Aligned_cols=35 Identities=40% Similarity=0.572 Sum_probs=31.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
....|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45689999999999999999999998 588999765
No 382
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.94 E-value=0.27 Score=46.80 Aligned_cols=35 Identities=20% Similarity=0.412 Sum_probs=32.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|.|||+|-.|.++|..|++.|++|++++|.+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 35799999999999999999999999999998764
No 383
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.91 E-value=0.37 Score=50.65 Aligned_cols=33 Identities=24% Similarity=0.491 Sum_probs=30.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998753
No 384
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=88.90 E-value=0.32 Score=51.38 Aligned_cols=99 Identities=22% Similarity=0.445 Sum_probs=75.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .+ .
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~----------------~~---~-------------------- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR----------------NF---D-------------------- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS---C--------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc----------------cc---C--------------------
Confidence 45899999999999999999999999999998765310 00 0
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.|.+.+++.|+ ++++++++++++.
T Consensus 232 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~~ 260 (484)
T 3o0h_A 232 --------------------------------YDLRQLLNDAMVAKGI-------------------SIIYEATVSQVQS 260 (484)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEESSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEe
Confidence 1223345666677776 8899999999998
Q ss_pred eCCeEEEEEEeccCCceeeEEEEecEEEeecCCChh
Q 008258 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (572)
Q Consensus 203 ~~~~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S~ 238 (572)
+++++.+++. +|+ ++.+|.||.|.|..+.
T Consensus 261 ~~~~v~v~~~---~g~----~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 261 TENCYNVVLT---NGQ----TICADRVMLATGRVPN 289 (484)
T ss_dssp CSSSEEEEET---TSC----EEEESEEEECCCEEEC
T ss_pred eCCEEEEEEC---CCc----EEEcCEEEEeeCCCcC
Confidence 8888766654 553 6899999999997543
No 385
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.85 E-value=0.52 Score=46.31 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=30.6
Q ss_pred CEEEEC-CCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVG-aGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.|.||| +|-.|.++|..|++.|++|.++++.+.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 699999 999999999999999999999997653
No 386
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=88.77 E-value=11 Score=39.34 Aligned_cols=47 Identities=11% Similarity=0.115 Sum_probs=34.1
Q ss_pred ceEEeccEEEEEeeeCCe------EEEEEEeccCCceeeEEEEecEEEeecCCCh
Q 008258 189 REILMGHECVSVSATDQC------INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (572)
Q Consensus 189 ~~i~~g~~v~~v~~~~~~------v~v~~~~~~~g~~~~~~i~ad~vVgADG~~S 237 (572)
.+|+++++|++|+.++++ +.|++.. ++|+ ..++++||.||.|-....
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~-~~g~-~~~~~~ad~VI~a~p~~~ 308 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISAS-PHKR-QSEEESFDAVIMTAPLCD 308 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBC-SSSS-CBCCCEESEEEECSCHHH
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcC-CCCc-cceeEECCEEEECCCHHH
Confidence 489999999999988877 7777652 1231 002578999999998754
No 387
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.75 E-value=0.38 Score=46.53 Aligned_cols=34 Identities=35% Similarity=0.495 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|+|+|+|-+|.++|..|++.|.+|.|+.|..+
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999988999998764
No 388
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=88.75 E-value=1.2 Score=45.65 Aligned_cols=36 Identities=22% Similarity=0.143 Sum_probs=28.2
Q ss_pred CcEEEEecccccCCCCCCCCchhHHHHHHHHHHHHHHHh
Q 008258 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL 397 (572)
Q Consensus 359 grV~LiGDAAH~~~P~~G~G~n~ai~DA~~La~~La~~~ 397 (572)
.+|+.+||+++.-.|.. ...|..++..+|..|...+
T Consensus 300 ~~vfa~GD~~~~~~~~~---~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 300 DNVYAVGDANSMTVPKL---GYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TTEEECGGGBTTCCSCC---HHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeehhccCCCCcH---HHHHHHHHHHHHHHHHHHh
Confidence 69999999998633433 3468889999999988876
No 389
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.68 E-value=0.48 Score=47.19 Aligned_cols=33 Identities=15% Similarity=0.312 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
.+|.|||+|..|.++|..|+..|+ +++++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 579999999999999999999998 899999853
No 390
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.65 E-value=0.28 Score=47.84 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=31.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|.|||.|-.|..+|..|++.|++|++++|.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998765
No 391
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.57 E-value=0.34 Score=48.06 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~~ 77 (572)
+|.|||+|..|.++|..|++.|+ +++++|..+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 59999999999999999999997 8999998764
No 392
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.57 E-value=0.41 Score=45.79 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=31.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC----CCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~G----i~v~viEr~~~~ 78 (572)
.+|.|||+|-.|.+.|..|++.| .+|.+++|.+..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 47999999999999999999999 689999987654
No 393
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.56 E-value=0.48 Score=45.85 Aligned_cols=35 Identities=31% Similarity=0.434 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..|+|.|+|-.|..++..|.+.|++|+++.|.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 36999999999999999999999999999987653
No 394
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.53 E-value=0.34 Score=51.14 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=32.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+++.+|.|||+|.-|..+|..|++.|++|.+++|.+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 3456899999999999999999999999999998753
No 395
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.48 E-value=0.35 Score=49.36 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|+|+|..|+.+|..++..|.+|+++|+.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999763
No 396
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.48 E-value=0.35 Score=48.17 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~ 75 (572)
....|+|||+|..|.++|..|+..|+ ++.++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34579999999999999999999988 79999974
No 397
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.47 E-value=0.31 Score=48.55 Aligned_cols=30 Identities=33% Similarity=0.463 Sum_probs=28.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr 74 (572)
+|.|||+|-.|.++|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 398
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.46 E-value=0.32 Score=49.40 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=31.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKN 75 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~ 75 (572)
-.+.+|+|+|||-+|..+|..|...|. +|.++|++
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 345789999999999999999999999 89999986
No 399
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.40 E-value=0.47 Score=48.50 Aligned_cols=34 Identities=26% Similarity=0.549 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|+|+|+|..|..+|.++.+.|++|++++..+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 4799999999999999999999999999997654
No 400
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.37 E-value=0.35 Score=46.33 Aligned_cols=34 Identities=24% Similarity=0.441 Sum_probs=30.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4589999999999999999999998 588998764
No 401
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.33 E-value=0.36 Score=47.97 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=29.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~ 75 (572)
..+|+|||||-+|.++|..|+..|+ ++.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3589999999999999999999885 79999875
No 402
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.25 E-value=0.22 Score=49.50 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=31.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~~ 77 (572)
.+|.|||.|-.|..+|..|++.| ++|+++++.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 46999999999999999999999 99999999864
No 403
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.25 E-value=0.33 Score=50.89 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
-.|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999998753
No 404
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.19 E-value=0.42 Score=46.28 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|+|+|.+|.++|..|++.|.+|+|++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 369999999999999999999999999998764
No 405
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.02 E-value=0.44 Score=51.44 Aligned_cols=36 Identities=14% Similarity=0.372 Sum_probs=33.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~ 79 (572)
-.|+|||+|..|..+|..|.+.|++|+++|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~ 384 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV 384 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHH
Confidence 579999999999999999999999999999998753
No 406
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.98 E-value=0.3 Score=47.89 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+|.|||+|-.|...|..|++.|++|.++++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998764
No 407
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=87.92 E-value=0.36 Score=50.92 Aligned_cols=101 Identities=21% Similarity=0.249 Sum_probs=73.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCCeeeeChhHHHHHHhhcchHHHHHhcCCCcccccceeeee
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~~~~~a~~l~~rt~e~l~~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (572)
.-+|+|||||+.|+-+|..|++.|.+|+++++.... +.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------~~~d-------------------- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL--------------------RGFD-------------------- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------TTSC--------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------cccC--------------------
Confidence 347999999999999999999999999999874211 0100
Q ss_pred CCCCCeeeeecCCCccccccccCCccccccChhhHHHHHHHHHHhcCceeeccCCcccccccccccceEEeccEEEEEee
Q 008258 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (572)
Q Consensus 123 ~~~G~~~~~~~~~~~~~~~~~~sp~~~~~l~q~~L~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~g~~v~~v~~ 202 (572)
..+.+.+.+.+++.|+ ++++++++++++.
T Consensus 227 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 255 (483)
T 3dgh_A 227 --------------------------------QQMAELVAASMEERGI-------------------PFLRKTVPLSVEK 255 (483)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------CEEETEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCC-------------------EEEeCCEEEEEEE
Confidence 1223345566677776 8999999999987
Q ss_pred eCC-eEEEEEEeccCCceeeEEEEecEEEeecCCC
Q 008258 203 TDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (572)
Q Consensus 203 ~~~-~v~v~~~~~~~g~~~~~~i~ad~vVgADG~~ 236 (572)
+++ .+.+++...++ ++..++.+|.||-|-|..
T Consensus 256 ~~~~~~~v~~~~~~~--~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 256 QDDGKLLVKYKNVET--GEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp CTTSCEEEEEEETTT--CCEEEEEESEEEECSCEE
T ss_pred cCCCcEEEEEecCCC--CceeEEEcCEEEECcccc
Confidence 654 46677663222 234578999999999964
No 408
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.84 E-value=0.41 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=30.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~ 75 (572)
.+.+|.|||||-+|.++|..|+..++ +++++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34689999999999999999999886 79999974
No 409
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.83 E-value=0.36 Score=47.37 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=31.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 42 ~~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+..|.|||+|.-|...|..|+ .|++|+++|+.++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 3468999999999999999999 9999999998653
No 410
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=87.78 E-value=0.39 Score=46.68 Aligned_cols=36 Identities=22% Similarity=0.184 Sum_probs=32.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~~ 78 (572)
...|+|+|+|-+|.++|..|++.|. +|.|+.|....
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~ 153 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSR 153 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 3579999999999999999999999 89999988643
No 411
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=87.78 E-value=0.51 Score=48.13 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=33.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~~ 79 (572)
...++|+|||..|.++|..++..|++|+|+|.++...
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 4589999999999999999999999999999887753
No 412
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.71 E-value=0.45 Score=46.78 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999998 899998874
No 413
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.65 E-value=0.38 Score=47.83 Aligned_cols=32 Identities=28% Similarity=0.420 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
+|.|||+|-.|.++|..|++.|+ +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999864
No 414
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.54 E-value=0.47 Score=45.93 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.|.|||+|-.|.++|..|++.|++|.++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998764
No 415
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.51 E-value=0.4 Score=46.38 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|.|||-.|..++..|.+.|++|+++.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 369999999999999999999999999998864
No 416
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.50 E-value=0.47 Score=47.09 Aligned_cols=33 Identities=30% Similarity=0.538 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
.+|.|||+|..|.++|+.|+..|+ +++++|..+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 579999999999999999998886 799999763
No 417
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=87.48 E-value=0.38 Score=49.57 Aligned_cols=32 Identities=25% Similarity=0.475 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|.|||+|-.|+.+|..|++ |++|+++++.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHH
Confidence 59999999999999999999 999999998753
No 418
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.39 E-value=0.48 Score=47.84 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
.|+|+|||..|..+|.++++.|++|+++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 5999999999999999999999999999987754
No 419
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.31 E-value=0.46 Score=43.84 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.6
Q ss_pred CEEEEC-CCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVG-aGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
+|+||| +|-.|..+|..|++.|++|.+++|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999864
No 420
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.21 E-value=0.38 Score=50.60 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~ 77 (572)
.+|.|||+|-.|+.+|..|++. |++|+++|+.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 3699999999999999999999 899999998754
No 421
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.19 E-value=0.57 Score=45.57 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.3
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|.|||+ |-.|..+|..|++.|++|++++|.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999999764
No 422
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=87.18 E-value=0.53 Score=45.95 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=30.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
+|.|||+|-.|...|..|++.|++|.+++|.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 599999999999999999999999999998643
No 423
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=87.17 E-value=0.42 Score=48.42 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=31.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCC
Q 008258 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKN 75 (572)
Q Consensus 41 ~~~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~ 75 (572)
-.+..|+|+|||-+|..+|..|...|. +|.++||.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 345789999999999999999999999 79999986
No 424
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.10 E-value=0.58 Score=46.72 Aligned_cols=35 Identities=26% Similarity=0.498 Sum_probs=31.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCC-EEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~-v~viEr~~~ 77 (572)
...|+|||+|-.|..+|..|++.|+. ++|+|...-
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 46899999999999999999999985 888998753
No 425
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.08 E-value=0.36 Score=48.89 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=30.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
+|.|||+|-.|.++|..|++.|++|.+++|.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 426
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=87.00 E-value=0.44 Score=47.37 Aligned_cols=32 Identities=16% Similarity=0.363 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
-+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 57999999999999999999999 799999874
No 427
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.00 E-value=0.63 Score=49.01 Aligned_cols=34 Identities=12% Similarity=0.307 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||.|--|..+|..|++.|++|++++|.+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 428
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.92 E-value=0.45 Score=48.98 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|||.|+.|..+|..|...|.+|+++|+.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 479999999999999999999999999999764
No 429
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=86.90 E-value=0.6 Score=46.66 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|.|| |-.|..++..|.+.|++|.++.|.+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 47999999 9999999999999999999999976
No 430
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=86.86 E-value=0.3 Score=49.12 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC-------CCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~G-------i~v~viEr~~~ 77 (572)
.+|.|||+|-.|.++|..|++.| .+|.+++|.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 36999999999999999999999 89999998765
No 431
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=86.79 E-value=0.54 Score=45.65 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=28.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.|.|||+|..|...|..|++ |++|.++++.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999864
No 432
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.72 E-value=0.45 Score=50.18 Aligned_cols=33 Identities=33% Similarity=0.363 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
-.|+|||+|+.|..+|..|+..|.+|+++|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999764
No 433
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=86.60 E-value=0.72 Score=44.86 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC---CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI---KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi---~v~viEr~~~ 77 (572)
..|.|||+|--|.+.|..|.+.|+ +|.+++|++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 579999999999999999999999 8999998754
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.55 E-value=0.48 Score=48.16 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=31.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCC-------CCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~G-------i~v~viEr~~~ 77 (572)
+|.|||+|-.|.++|..|++.| .+|++++|.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 435
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.53 E-value=0.69 Score=49.01 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|.|||+|.-|..+|..|++.|++|.+++|.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998754
No 436
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=86.42 E-value=0.61 Score=47.40 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
-.|+|+|+|+.|++++..++..|. +|+++++.+.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~ 229 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK 229 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 479999999999999998888899 7999987654
No 437
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.42 E-value=0.67 Score=48.91 Aligned_cols=34 Identities=12% Similarity=0.307 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||+|-.|..+|..|++.|++|.+++|.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 438
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.40 E-value=0.79 Score=45.91 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|.|||+|-.|.+.|..|++.|++|+++++.+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 3699999999999999999999999999998753
No 439
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.36 E-value=0.49 Score=49.63 Aligned_cols=33 Identities=30% Similarity=0.289 Sum_probs=30.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~ 75 (572)
...|+|||||.+|...|..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 357999999999999999999999999999964
No 440
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.33 E-value=0.59 Score=42.98 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=29.7
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.|+|.|| |-.|..++..|.+.|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4999996 9999999999999999999999875
No 441
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.19 E-value=0.5 Score=46.36 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
+|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 69999999999999999999999999999864
No 442
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.18 E-value=0.52 Score=44.18 Aligned_cols=34 Identities=32% Similarity=0.398 Sum_probs=31.1
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|+|.|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 46999998 99999999999999999999998754
No 443
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=86.03 E-value=4.8 Score=42.46 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~~ 78 (572)
.+|+|||+|-+|.-.+..|++. +.+|.++=|.+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 3699999999999999999875 7889999988754
No 444
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.03 E-value=0.73 Score=44.10 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=30.7
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~~ 77 (572)
.|+|+|+|-+|.+++..|.+.|. ++.|++|.+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 79999999999999999999999 8999998753
No 445
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.02 E-value=0.66 Score=46.56 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-.|+|+|+|+.|++++..++..|.+|+++++.+.
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 211 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH 211 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999889999999987654
No 446
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=85.89 E-value=0.56 Score=44.86 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=29.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCC-CCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~G-i~v~viEr~~ 76 (572)
.|.|||+|-.|...|..|++.| .+|.+++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999998764
No 447
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.88 E-value=0.62 Score=45.14 Aligned_cols=32 Identities=34% Similarity=0.395 Sum_probs=29.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
.|.|||+|..|.++|..|++.|+ +|+++++.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998763
No 448
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.85 E-value=0.75 Score=45.01 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=31.6
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
..|+|.|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 46999999 99999999999999999999999765
No 449
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.79 E-value=0.72 Score=45.58 Aligned_cols=32 Identities=25% Similarity=0.507 Sum_probs=29.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
+|.|||||-+|.++|..|+..|+ +++++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999898 599999864
No 450
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=85.63 E-value=0.56 Score=46.32 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=29.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~G--i~v~viEr~~ 76 (572)
+|.|||+|-.|.++|..|++.| .+|+++|+.+
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999863
No 451
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.52 E-value=0.59 Score=46.08 Aligned_cols=34 Identities=21% Similarity=0.522 Sum_probs=29.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~~~ 77 (572)
.+|.|||||-.|..+|..|+..|+ +++++|..+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 479999999999999999999998 8999998754
No 452
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.50 E-value=0.73 Score=43.74 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC----CEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI----KCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi----~v~viEr~~~ 77 (572)
.+|.|||+|-.|.+.|..|.+.|+ +|.+++|++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 469999999999999999999998 9999998643
No 453
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=85.44 E-value=0.89 Score=47.00 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=31.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|+|+|+|..|..++.++++.|++|++++..+.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 34799999999999999999999999999986543
No 454
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=85.42 E-value=0.77 Score=45.97 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=30.3
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCC-CCEEEEcCCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLG-IKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~G-i~v~viEr~~~ 77 (572)
..|+|.|| |..|..++..|.+.| .+|+++.|.+.
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 46999999 999999999999999 99999988654
No 455
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.41 E-value=0.77 Score=45.81 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=29.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~ 75 (572)
..+|.|||+|-.|.++|..|+..|+ +++++|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3579999999999999999999987 79999975
No 456
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=85.38 E-value=0.51 Score=47.14 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=29.3
Q ss_pred cCCEEEECC-CHHHHHHHHHHHhCCC-------CEEEEcCC
Q 008258 43 VVPVLIVGA-GPVGLVLSILLTKLGI-------KCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGa-GpaGL~~A~~La~~Gi-------~v~viEr~ 75 (572)
..+|+|+|| |-+|.+++..|...|+ ++.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 357999998 9999999999999886 79999876
No 457
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=85.35 E-value=0.59 Score=45.32 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|||+|-+|.++|..|.+.|.+|.+++|.+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 458
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.35 E-value=0.68 Score=45.33 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|||+|..|..+|..|+..|.+|+++++.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 459
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=85.31 E-value=0.75 Score=44.83 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 469999999999999999999999 599998874
No 460
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=85.17 E-value=0.61 Score=51.87 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=31.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.|.|||+|.-|...|..|++.|++|+++|+.++
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 699999999999999999999999999998764
No 461
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.16 E-value=0.47 Score=48.80 Aligned_cols=30 Identities=30% Similarity=0.330 Sum_probs=27.9
Q ss_pred CEEEECCCHHHHHHHHHHHh-CCCCEEEEcC
Q 008258 45 PVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~-~Gi~v~viEr 74 (572)
+|.|||+|-.|.++|..|++ .|.+|+++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 69999999999999999998 4999999984
No 462
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.15 E-value=0.74 Score=41.71 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=31.5
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..|+|.|| |-.|..++..|.+.|.+|+++.|.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~ 39 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh
Confidence 36999999 999999999999999999999987653
No 463
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.09 E-value=0.56 Score=49.51 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~--Gi~v~viEr~~~ 77 (572)
.+|.|||+|-.|+.+|..|++. |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 3799999999999999999998 799999998754
No 464
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.05 E-value=0.72 Score=42.58 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=29.8
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.|+|.|| |-.|..++..|.+.|++|+++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999864
No 465
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=85.03 E-value=0.84 Score=44.86 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=30.4
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 45 dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.|+|+|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 6999997 99999999999999999999998764
No 466
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=84.90 E-value=0.75 Score=45.55 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
-.|+|+|+|-+|.++|..|++.|. +|.|+.|.+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 469999999999999999999999 799999873
No 467
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=84.87 E-value=0.91 Score=47.77 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=31.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+|.|||+|-.|..+|..|++.|++|.+++|.+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 39 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTS 39 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998643
No 468
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.86 E-value=0.91 Score=43.41 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=29.4
Q ss_pred CCEEEECC-C-HHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGA-G-PVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGa-G-paGL~~A~~La~~Gi~v~viEr~~ 76 (572)
-.|+|.|| | -.|..+|..|++.|.+|++++|+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 35899999 7 599999999999999999998864
No 469
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=84.76 E-value=0.94 Score=43.48 Aligned_cols=32 Identities=28% Similarity=0.576 Sum_probs=30.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.|+|||+|-.|.+.|..|.+.|.+|.+++|.+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 470
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.75 E-value=0.75 Score=49.43 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=30.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
...|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4689999999999999999999998 588999875
No 471
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=84.71 E-value=0.94 Score=45.44 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=29.2
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCC--CEEEEcCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGI--KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi--~v~viEr~~ 76 (572)
.+|+|||+ |-+|.++|..|...|+ +++++|...
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 47999998 9999999999999985 799999753
No 472
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=84.71 E-value=0.87 Score=48.00 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 45 dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
+|.|||+|-.|..+|..|++.|++|.+++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 473
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=84.68 E-value=0.68 Score=46.71 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-.|+|+|||+.|++++..++..|.+|+++++.+.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~ 214 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSR 214 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999988888999999987654
No 474
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.63 E-value=0.76 Score=45.12 Aligned_cols=33 Identities=21% Similarity=0.427 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|||+|..|..+|..|...|.+|+++++.+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 475
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=84.62 E-value=0.68 Score=47.64 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|||+|..|..+|..|+..|. +|++++|.+
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999999 899998753
No 476
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.59 E-value=0.72 Score=46.50 Aligned_cols=34 Identities=26% Similarity=0.572 Sum_probs=30.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
...|+|||+|..|..+|..|++.|+ +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999998 588999764
No 477
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=84.59 E-value=0.79 Score=45.66 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=29.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--CEEEEcCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi--~v~viEr~ 75 (572)
+.+|.|||||-+|.++|+.|+..++ +++++|..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3689999999999999999998886 78999974
No 478
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=84.59 E-value=0.73 Score=47.39 Aligned_cols=33 Identities=27% Similarity=0.434 Sum_probs=30.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
...|+|+|+|..|..++.++.+.|++|++++ .+
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 4579999999999999999999999999999 54
No 479
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.57 E-value=0.57 Score=45.38 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 369999999999999999999999999998874
No 480
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=84.41 E-value=0.92 Score=46.15 Aligned_cols=35 Identities=20% Similarity=0.494 Sum_probs=31.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
...|+|+|+|..|...+.++++.|++|.+++..+.
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 35799999999999999999999999999987654
No 481
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.13 E-value=0.76 Score=46.19 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=30.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 43 ~~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
...|+|||+|..|..+|..|++.|+ +++|+|...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 4689999999999999999999999 688998654
No 482
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=84.11 E-value=0.89 Score=44.23 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.0
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 45 dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
+|+|.|| |-.|..++..|.++|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 5999999 999999999999999999999887543
No 483
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=84.08 E-value=0.57 Score=48.56 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
.+..|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4678999999999999999999999999999865
No 484
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=84.06 E-value=0.74 Score=44.92 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=29.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|+|+|-+|.++|..|++.| +|+|++|..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 36999999999999999999999 999998753
No 485
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.91 E-value=1.1 Score=43.69 Aligned_cols=33 Identities=9% Similarity=0.154 Sum_probs=28.9
Q ss_pred CCEEEECCC---HHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGAG---PVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaG---paGL~~A~~La~~Gi~v~viEr~~ 76 (572)
--|+|.||+ -.|..+|..|++.|.+|++++|..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 358899986 789999999999999999998863
No 486
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.89 E-value=0.69 Score=42.87 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.5
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..|+|.|| |-.|..++..|.+.|++|+++.|.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 36999996 999999999999999999999998654
No 487
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=83.86 E-value=0.92 Score=43.89 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|+|+|-+|-+++..|++.|+ ++.|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999998 799998864
No 488
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=83.78 E-value=1 Score=43.66 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|+|+|-+|.++|..|++.|+ +|+|+.|..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999997 899998864
No 489
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=83.68 E-value=0.71 Score=44.95 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 479999999999999999999999 799998865
No 490
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.65 E-value=0.76 Score=46.58 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=29.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-.|+|+|+|+.|++++..++..|.+|+++++.+.
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~ 229 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEA 229 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3699999999999999988889999998987543
No 491
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=83.55 E-value=0.82 Score=46.06 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=29.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-.|+|+|+|+.|++++..++..|.+|+++++.+.
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~ 215 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNK 215 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChH
Confidence 4699999999999999988888999999987643
No 492
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=83.52 E-value=0.79 Score=46.38 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEcCCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi~v~viEr~~~ 77 (572)
-.|+|+|+|+.|++++..++..|.+|+++++.+.
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~ 222 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPS 222 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999987643
No 493
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=83.48 E-value=0.87 Score=45.02 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|+|+|-+|.++|..|++.|. +|.|+.|.+
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 479999999999999999999999 699998873
No 494
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.38 E-value=1.1 Score=44.83 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
-.|+|+|||+.|++++..++..|. +|+++++.+
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 202 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSD 202 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 469999999999999999999999 899998753
No 495
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=83.32 E-value=1.2 Score=44.20 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=31.2
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~~~ 78 (572)
..|+|.|| |-.|..++..|.+.|.+|+++.|....
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 41 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS 41 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 46999996 999999999999999999999987653
No 496
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.27 E-value=1.1 Score=43.87 Aligned_cols=47 Identities=9% Similarity=0.110 Sum_probs=29.9
Q ss_pred CCCcccccCCCC--ccCCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 30 ALSDSKTIVSNE--AVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 30 ~~~~~~~~~~~~--~~~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
.+||.+|..++. ..--|+|.|| |-.|..+|..|++.|.+|++++|+.
T Consensus 16 ~~~~~~m~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~ 65 (301)
T 3tjr_A 16 TQGPGSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQ 65 (301)
T ss_dssp --------CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCccchhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 355555533221 2235889997 5789999999999999999998863
No 497
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=83.21 E-value=0.95 Score=45.44 Aligned_cols=33 Identities=30% Similarity=0.464 Sum_probs=28.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
-.|+|+|+|+.|++++..++..|. +|+++++.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~ 201 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRK 201 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCH
Confidence 469999999999999988888899 799998653
No 498
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=83.06 E-value=1.1 Score=42.39 Aligned_cols=33 Identities=15% Similarity=0.346 Sum_probs=28.6
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCC
Q 008258 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGa-GpaGL~~A~~La~~Gi~v~viEr~~ 76 (572)
..|+|.|| |-.|..+|..|++.|.+|++++|.+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~ 47 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDE 47 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35888886 7889999999999999999998763
No 499
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=82.81 E-value=1.4 Score=44.08 Aligned_cols=35 Identities=31% Similarity=0.406 Sum_probs=30.9
Q ss_pred cCCEEEECC-CHHHHHHHHHHHh--CCCCEEEEcCCCC
Q 008258 43 VVPVLIVGA-GPVGLVLSILLTK--LGIKCSVLEKNKA 77 (572)
Q Consensus 43 ~~dVlIVGa-GpaGL~~A~~La~--~Gi~v~viEr~~~ 77 (572)
...|+|.|| |-.|..++..|.+ .|++|++++|.+.
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 356999976 9999999999999 8999999998654
No 500
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=82.80 E-value=1 Score=43.81 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCC
Q 008258 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (572)
Q Consensus 44 ~dVlIVGaGpaGL~~A~~La~~Gi-~v~viEr~~ 76 (572)
..|+|+|+|-+|.++|..|++.|+ +|.|+.|..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 469999999999999999999997 899998864
Done!