Query 008262
Match_columns 572
No_of_seqs 630 out of 3385
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 22:02:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008262.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008262hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vl5_A Unknown conserved prote 99.6 2.2E-15 7.5E-20 149.6 15.8 160 259-436 26-188 (260)
2 4hg2_A Methyltransferase type 99.6 7.5E-16 2.6E-20 155.2 9.3 120 257-390 28-149 (257)
3 1xxl_A YCGJ protein; structura 99.6 3.1E-15 1E-19 147.3 13.1 149 273-435 20-171 (239)
4 4gek_A TRNA (CMO5U34)-methyltr 99.6 7.8E-15 2.7E-19 148.0 13.7 101 273-377 69-179 (261)
5 2p35_A Trans-aconitate 2-methy 99.6 9.8E-15 3.3E-19 144.1 13.5 185 257-460 20-209 (259)
6 3bus_A REBM, methyltransferase 99.6 3.1E-14 1.1E-18 141.9 16.1 122 250-377 41-167 (273)
7 3gu3_A Methyltransferase; alph 99.6 2.9E-14 9.8E-19 144.2 14.8 115 257-377 8-127 (284)
8 3dlc_A Putative S-adenosyl-L-m 99.5 9.6E-14 3.3E-18 132.6 15.7 116 255-377 29-149 (219)
9 3g5l_A Putative S-adenosylmeth 99.5 7.7E-14 2.6E-18 137.7 14.3 109 261-377 35-146 (253)
10 3ccf_A Cyclopropane-fatty-acyl 99.5 2.6E-14 8.8E-19 143.7 10.9 170 273-457 56-228 (279)
11 1nkv_A Hypothetical protein YJ 99.5 5.4E-14 1.9E-18 138.7 12.5 117 254-377 20-141 (256)
12 3mgg_A Methyltransferase; NYSG 99.5 9E-14 3.1E-18 139.0 13.7 102 273-376 36-142 (276)
13 3hnr_A Probable methyltransfer 99.5 1.1E-13 3.6E-18 133.5 13.7 149 274-435 45-198 (220)
14 2p7i_A Hypothetical protein; p 99.5 8.3E-14 2.9E-18 135.5 12.2 102 274-383 42-147 (250)
15 3kkz_A Uncharacterized protein 99.5 1.3E-13 4.6E-18 137.4 13.9 117 255-377 30-151 (267)
16 2o57_A Putative sarcosine dime 99.5 1E-13 3.4E-18 140.3 13.1 124 252-377 60-188 (297)
17 3dtn_A Putative methyltransfer 99.5 8.2E-14 2.8E-18 135.7 12.0 116 255-377 28-149 (234)
18 3f4k_A Putative methyltransfer 99.5 1.3E-13 4.6E-18 135.9 13.7 117 254-376 29-150 (257)
19 3dli_A Methyltransferase; PSI- 99.5 5.9E-14 2E-18 137.8 10.3 119 254-385 24-148 (240)
20 3sm3_A SAM-dependent methyltra 99.5 2.6E-13 8.9E-18 131.2 13.9 160 274-435 30-204 (235)
21 1pjz_A Thiopurine S-methyltran 99.5 4E-14 1.4E-18 136.6 7.6 104 273-376 21-140 (203)
22 2aot_A HMT, histamine N-methyl 99.5 7.1E-14 2.4E-18 141.9 9.6 104 273-377 51-173 (292)
23 2yqz_A Hypothetical protein TT 99.5 2E-13 6.9E-18 134.7 12.5 171 273-457 38-212 (263)
24 3ujc_A Phosphoethanolamine N-m 99.5 1.6E-13 5.6E-18 135.4 11.7 115 254-377 39-160 (266)
25 3ege_A Putative methyltransfer 99.5 1.2E-13 4.1E-18 137.8 10.3 109 257-377 21-131 (261)
26 3dh0_A SAM dependent methyltra 99.5 2.5E-13 8.6E-18 130.7 11.9 103 273-377 36-144 (219)
27 1xtp_A LMAJ004091AAA; SGPP, st 99.5 1E-13 3.4E-18 136.4 9.2 118 254-377 77-198 (254)
28 3l8d_A Methyltransferase; stru 99.5 2.6E-13 8.8E-18 132.5 12.0 98 274-377 53-154 (242)
29 3h2b_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 131.2 9.3 98 275-377 42-142 (203)
30 2avn_A Ubiquinone/menaquinone 99.5 2.6E-13 9E-18 135.1 11.8 98 274-377 54-153 (260)
31 4fsd_A Arsenic methyltransfera 99.4 1E-13 3.5E-18 146.8 8.7 169 273-457 82-269 (383)
32 2gs9_A Hypothetical protein TT 99.4 5.6E-13 1.9E-17 127.8 13.0 97 274-377 36-133 (211)
33 3g5t_A Trans-aconitate 3-methy 99.4 4.4E-13 1.5E-17 136.2 12.8 101 273-375 35-148 (299)
34 3vc1_A Geranyl diphosphate 2-C 99.4 5.2E-13 1.8E-17 136.7 13.2 113 259-377 105-222 (312)
35 3e23_A Uncharacterized protein 99.4 6.2E-13 2.1E-17 127.6 12.7 97 274-377 43-142 (211)
36 4htf_A S-adenosylmethionine-de 99.4 3.5E-13 1.2E-17 135.7 11.3 102 274-377 68-174 (285)
37 3ofk_A Nodulation protein S; N 99.4 4.1E-13 1.4E-17 129.2 10.9 101 273-377 50-155 (216)
38 2ex4_A Adrenal gland protein A 99.4 4.8E-13 1.6E-17 131.4 11.4 103 274-377 79-186 (241)
39 4e2x_A TCAB9; kijanose, tetron 99.4 5.8E-14 2E-18 149.5 5.1 114 254-377 91-209 (416)
40 2gb4_A Thiopurine S-methyltran 99.4 1.7E-13 5.7E-18 137.5 8.0 103 274-376 68-191 (252)
41 2xvm_A Tellurite resistance pr 99.4 9.7E-13 3.3E-17 124.1 12.8 101 274-376 32-136 (199)
42 1kpg_A CFA synthase;, cyclopro 99.4 7.4E-13 2.5E-17 133.2 12.7 119 251-377 45-169 (287)
43 3thr_A Glycine N-methyltransfe 99.4 3.8E-13 1.3E-17 135.6 10.5 117 256-377 43-176 (293)
44 3pfg_A N-methyltransferase; N, 99.4 6.1E-13 2.1E-17 132.2 11.7 112 257-376 35-151 (263)
45 3jwh_A HEN1; methyltransferase 99.4 4.8E-13 1.7E-17 129.1 10.4 115 256-376 15-141 (217)
46 2p8j_A S-adenosylmethionine-de 99.4 6.1E-13 2.1E-17 126.9 10.9 103 274-377 23-129 (209)
47 3jwg_A HEN1, methyltransferase 99.4 6.2E-13 2.1E-17 128.4 11.1 116 255-376 14-141 (219)
48 3ou2_A SAM-dependent methyltra 99.4 5.3E-13 1.8E-17 127.8 10.3 109 259-377 34-147 (218)
49 3hem_A Cyclopropane-fatty-acyl 99.4 1E-12 3.5E-17 133.7 13.0 118 251-377 53-184 (302)
50 1ve3_A Hypothetical protein PH 99.4 1.1E-12 3.9E-17 126.4 12.6 103 274-377 38-143 (227)
51 3mti_A RRNA methylase; SAM-dep 99.4 1.5E-12 5E-17 122.5 12.7 105 273-378 21-137 (185)
52 3i9f_A Putative type 11 methyl 99.4 3.8E-13 1.3E-17 124.5 8.5 96 273-377 16-113 (170)
53 3orh_A Guanidinoacetate N-meth 99.4 2.6E-13 8.9E-18 134.2 7.4 113 256-375 47-169 (236)
54 1y8c_A S-adenosylmethionine-de 99.4 1.3E-12 4.3E-17 127.2 12.0 119 255-377 20-143 (246)
55 3bkw_A MLL3908 protein, S-aden 99.4 1.6E-12 5.3E-17 126.8 12.7 107 261-377 34-145 (243)
56 1dus_A MJ0882; hypothetical pr 99.4 2.4E-12 8.3E-17 120.3 12.3 115 257-377 39-158 (194)
57 1zx0_A Guanidinoacetate N-meth 99.4 4.2E-13 1.5E-17 131.7 7.4 114 256-376 47-170 (236)
58 2kw5_A SLR1183 protein; struct 99.4 1.2E-12 4.1E-17 124.6 10.0 98 277-377 32-132 (202)
59 3p9n_A Possible methyltransfer 99.4 1.4E-12 4.9E-17 123.4 10.4 123 253-377 24-154 (189)
60 3g2m_A PCZA361.24; SAM-depende 99.4 1.8E-12 6E-17 131.7 11.5 114 257-377 70-191 (299)
61 1vlm_A SAM-dependent methyltra 99.4 3.7E-12 1.3E-16 123.4 13.1 93 275-377 48-140 (219)
62 3cc8_A Putative methyltransfer 99.4 4E-12 1.4E-16 122.2 13.0 101 273-382 31-135 (230)
63 2a14_A Indolethylamine N-methy 99.4 7.1E-13 2.4E-17 132.8 7.7 104 273-376 54-197 (263)
64 2pxx_A Uncharacterized protein 99.3 2E-12 6.8E-17 123.3 10.0 102 274-377 42-160 (215)
65 2fk8_A Methoxy mycolic acid sy 99.3 3.3E-12 1.1E-16 130.7 12.3 118 252-377 72-195 (318)
66 3e8s_A Putative SAM dependent 99.3 2E-12 6.8E-17 124.1 9.4 96 274-377 52-153 (227)
67 2vdw_A Vaccinia virus capping 99.3 1.8E-12 6.3E-17 133.3 9.4 103 274-377 48-170 (302)
68 3d2l_A SAM-dependent methyltra 99.3 7.4E-12 2.5E-16 121.9 13.2 115 255-377 20-138 (243)
69 3lcc_A Putative methyl chlorid 99.3 4.7E-12 1.6E-16 123.7 11.7 102 275-377 67-172 (235)
70 3m33_A Uncharacterized protein 99.3 2.2E-12 7.7E-17 125.8 9.4 88 274-373 48-139 (226)
71 3bxo_A N,N-dimethyltransferase 99.3 3.1E-12 1.1E-16 124.3 10.2 99 273-377 39-142 (239)
72 3m70_A Tellurite resistance pr 99.3 4.5E-12 1.5E-16 127.6 11.6 101 274-376 120-223 (286)
73 3bgv_A MRNA CAP guanine-N7 met 99.3 4.1E-12 1.4E-16 130.0 11.1 168 274-456 34-222 (313)
74 1wzn_A SAM-dependent methyltra 99.3 9.5E-12 3.2E-16 122.4 12.9 102 273-376 40-145 (252)
75 3grz_A L11 mtase, ribosomal pr 99.3 5E-12 1.7E-16 120.9 10.6 118 251-377 39-160 (205)
76 3hm2_A Precorrin-6Y C5,15-meth 99.3 8.5E-12 2.9E-16 115.7 11.9 112 256-377 11-128 (178)
77 3cgg_A SAM-dependent methyltra 99.3 1.5E-11 5.2E-16 114.9 13.4 99 274-377 46-148 (195)
78 2g72_A Phenylethanolamine N-me 99.3 3.1E-12 1.1E-16 129.3 8.9 118 257-376 56-215 (289)
79 3dmg_A Probable ribosomal RNA 99.3 5.4E-12 1.9E-16 134.0 10.6 122 254-378 215-342 (381)
80 3ocj_A Putative exported prote 99.3 9E-12 3.1E-16 127.1 11.4 102 273-377 117-228 (305)
81 2zfu_A Nucleomethylin, cerebra 99.3 1.8E-11 6E-16 117.8 12.1 86 274-377 67-152 (215)
82 1p91_A Ribosomal RNA large sub 99.3 1.1E-11 3.7E-16 123.5 11.0 100 273-386 84-187 (269)
83 1xdz_A Methyltransferase GIDB; 99.3 3.1E-11 1.1E-15 118.9 14.1 105 274-386 70-182 (240)
84 3bkx_A SAM-dependent methyltra 99.3 1.2E-11 4E-16 123.3 10.9 117 255-377 28-160 (275)
85 3e05_A Precorrin-6Y C5,15-meth 99.3 3.9E-11 1.3E-15 114.7 14.0 111 258-377 28-143 (204)
86 3iv6_A Putative Zn-dependent a 99.3 9.9E-12 3.4E-16 125.6 10.0 109 258-377 33-149 (261)
87 1ri5_A MRNA capping enzyme; me 99.3 7.2E-12 2.5E-16 125.8 8.4 104 273-377 63-175 (298)
88 3g07_A 7SK snRNA methylphospha 99.2 4E-12 1.4E-16 129.4 6.2 104 274-377 46-221 (292)
89 3njr_A Precorrin-6Y methylase; 99.2 5.2E-11 1.8E-15 115.0 13.5 98 273-377 54-155 (204)
90 1yzh_A TRNA (guanine-N(7)-)-me 99.2 3E-11 1E-15 116.7 11.5 102 274-377 41-157 (214)
91 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.1E-11 3.8E-16 121.3 8.0 102 274-377 34-151 (218)
92 3ggd_A SAM-dependent methyltra 99.2 1.1E-11 3.6E-16 121.7 7.6 101 273-377 55-164 (245)
93 2fca_A TRNA (guanine-N(7)-)-me 99.2 1.9E-11 6.7E-16 118.7 9.3 101 274-376 38-153 (213)
94 1nt2_A Fibrillarin-like PRE-rR 99.2 4.5E-11 1.5E-15 116.3 11.9 98 273-376 56-161 (210)
95 3eey_A Putative rRNA methylase 99.2 3.8E-11 1.3E-15 113.9 10.8 104 273-377 21-140 (197)
96 2i62_A Nicotinamide N-methyltr 99.2 1.5E-11 5.3E-16 121.3 8.4 104 273-377 55-199 (265)
97 1ej0_A FTSJ; methyltransferase 99.2 3.9E-11 1.4E-15 109.7 10.4 103 273-388 21-147 (180)
98 2ift_A Putative methylase HI07 99.2 1.9E-11 6.5E-16 117.6 8.2 118 254-377 36-164 (201)
99 3lbf_A Protein-L-isoaspartate 99.2 5.2E-11 1.8E-15 114.1 10.9 109 257-377 64-175 (210)
100 2fhp_A Methylase, putative; al 99.2 3.4E-11 1.2E-15 112.5 9.4 129 242-377 16-155 (187)
101 3q7e_A Protein arginine N-meth 99.2 5.2E-11 1.8E-15 124.7 11.6 100 274-375 66-172 (349)
102 3g89_A Ribosomal RNA small sub 99.2 9.7E-11 3.3E-15 117.0 12.9 109 273-389 79-195 (249)
103 2fyt_A Protein arginine N-meth 99.2 8.2E-11 2.8E-15 122.8 12.6 111 257-373 51-168 (340)
104 2yxd_A Probable cobalt-precorr 99.2 1E-10 3.5E-15 108.3 11.6 109 256-377 21-132 (183)
105 1ws6_A Methyltransferase; stru 99.2 3E-11 1E-15 111.1 7.8 120 252-377 21-148 (171)
106 3htx_A HEN1; HEN1, small RNA m 99.2 1.1E-10 3.8E-15 133.1 13.9 118 254-377 705-835 (950)
107 3fpf_A Mtnas, putative unchara 99.2 1E-10 3.4E-15 120.2 12.4 97 273-376 121-222 (298)
108 2fpo_A Methylase YHHF; structu 99.2 6.2E-11 2.1E-15 114.1 10.3 118 254-377 37-161 (202)
109 3hp7_A Hemolysin, putative; st 99.2 1.2E-10 4.2E-15 119.3 12.7 97 273-378 84-187 (291)
110 3ckk_A TRNA (guanine-N(7)-)-me 99.2 4.9E-11 1.7E-15 118.1 9.4 104 273-377 45-169 (235)
111 3r0q_C Probable protein argini 99.2 1E-10 3.6E-15 123.6 12.5 112 257-375 50-168 (376)
112 3dp7_A SAM-dependent methyltra 99.2 9.3E-11 3.2E-15 123.0 11.9 101 274-377 179-288 (363)
113 1l3i_A Precorrin-6Y methyltran 99.2 1.1E-10 3.7E-15 108.8 11.0 112 256-377 19-135 (192)
114 3q87_B N6 adenine specific DNA 99.2 1.3E-10 4.5E-15 108.8 11.3 102 274-388 23-134 (170)
115 3mq2_A 16S rRNA methyltransfer 99.2 5.4E-11 1.8E-15 114.8 8.6 102 273-376 26-140 (218)
116 3evz_A Methyltransferase; NYSG 99.2 1.1E-10 3.6E-15 113.5 10.7 103 273-376 54-179 (230)
117 2qe6_A Uncharacterized protein 99.2 1.3E-10 4.6E-15 117.6 11.7 116 257-377 63-197 (274)
118 3p2e_A 16S rRNA methylase; met 99.1 2.9E-11 9.9E-16 118.9 6.3 104 273-376 23-139 (225)
119 4df3_A Fibrillarin-like rRNA/T 99.1 4.5E-11 1.5E-15 118.9 7.6 112 259-376 63-182 (233)
120 1jsx_A Glucose-inhibited divis 99.1 1.3E-10 4.4E-15 110.8 10.5 102 275-385 66-172 (207)
121 2nxc_A L11 mtase, ribosomal pr 99.1 1E-10 3.5E-15 116.9 10.0 98 274-377 120-219 (254)
122 3lpm_A Putative methyltransfer 99.1 3E-10 1E-14 113.2 13.4 112 274-388 49-186 (259)
123 3gwz_A MMCR; methyltransferase 99.1 3.7E-10 1.3E-14 118.7 14.6 100 273-377 201-308 (369)
124 2esr_A Methyltransferase; stru 99.1 4.2E-11 1.4E-15 111.6 5.9 117 255-377 15-139 (177)
125 4dzr_A Protein-(glutamine-N5) 99.1 2.2E-11 7.5E-16 115.8 4.1 125 255-386 14-173 (215)
126 2y1w_A Histone-arginine methyl 99.1 2.1E-10 7.2E-15 119.9 11.8 113 256-375 36-154 (348)
127 2frn_A Hypothetical protein PH 99.1 2.3E-10 7.8E-15 115.9 11.5 116 249-377 106-226 (278)
128 2pjd_A Ribosomal RNA small sub 99.1 9.2E-11 3.1E-15 122.2 8.7 114 257-377 183-304 (343)
129 4dcm_A Ribosomal RNA large sub 99.1 1.1E-10 3.7E-15 123.7 9.2 116 256-377 208-335 (375)
130 3i53_A O-methyltransferase; CO 99.1 2.3E-10 7.9E-15 118.0 11.3 100 274-377 169-275 (332)
131 1vbf_A 231AA long hypothetical 99.1 1.8E-10 6.2E-15 111.9 9.9 108 257-377 57-166 (231)
132 1x19_A CRTF-related protein; m 99.1 4.5E-10 1.5E-14 117.2 13.1 111 259-377 179-296 (359)
133 2plw_A Ribosomal RNA methyltra 99.1 2.8E-10 9.5E-15 108.0 10.5 93 273-377 21-155 (201)
134 2b3t_A Protein methyltransfera 99.1 8.4E-10 2.9E-14 111.0 14.5 116 254-376 94-238 (276)
135 3uwp_A Histone-lysine N-methyl 99.1 1E-10 3.6E-15 124.8 8.0 121 250-376 153-288 (438)
136 1dl5_A Protein-L-isoaspartate 99.1 3.3E-10 1.1E-14 116.7 11.4 109 257-377 62-176 (317)
137 2r3s_A Uncharacterized protein 99.1 3.1E-10 1.1E-14 116.5 11.0 102 273-377 164-272 (335)
138 3gdh_A Trimethylguanosine synt 99.1 1.1E-11 3.8E-16 121.4 0.1 99 274-375 78-180 (241)
139 1g6q_1 HnRNP arginine N-methyl 99.1 4.3E-10 1.5E-14 116.6 11.6 113 256-374 24-143 (328)
140 2ipx_A RRNA 2'-O-methyltransfe 99.1 2.4E-10 8.1E-15 111.8 8.7 99 273-377 76-183 (233)
141 1qzz_A RDMB, aclacinomycin-10- 99.1 4.3E-10 1.5E-14 117.6 11.2 100 273-377 181-288 (374)
142 3fzg_A 16S rRNA methylase; met 99.1 1.2E-10 4.2E-15 112.2 6.5 99 274-375 49-151 (200)
143 2pwy_A TRNA (adenine-N(1)-)-me 99.1 7.1E-10 2.4E-14 109.2 12.1 108 260-377 86-199 (258)
144 2ip2_A Probable phenazine-spec 99.1 7.3E-10 2.5E-14 114.1 12.6 98 276-377 169-273 (334)
145 1fbn_A MJ fibrillarin homologu 99.1 2.8E-10 9.5E-15 111.3 8.8 94 273-375 73-177 (230)
146 2yxe_A Protein-L-isoaspartate 99.1 9.3E-10 3.2E-14 105.7 12.2 107 258-377 65-178 (215)
147 1i9g_A Hypothetical protein RV 99.1 7.4E-10 2.5E-14 110.8 11.9 109 259-377 88-204 (280)
148 3dr5_A Putative O-methyltransf 99.0 4.4E-10 1.5E-14 110.2 9.8 114 254-376 40-163 (221)
149 3mb5_A SAM-dependent methyltra 99.0 8.7E-10 3E-14 108.8 11.9 106 260-377 83-195 (255)
150 1o9g_A RRNA methyltransferase; 99.0 2.6E-10 8.9E-15 112.8 7.8 116 257-376 38-214 (250)
151 3mcz_A O-methyltransferase; ad 99.0 5.4E-10 1.9E-14 115.9 10.1 100 275-377 180-288 (352)
152 3reo_A (ISO)eugenol O-methyltr 99.0 5.7E-10 1.9E-14 117.4 10.4 95 273-377 202-301 (368)
153 3sso_A Methyltransferase; macr 99.0 1.3E-10 4.6E-15 123.6 5.5 92 274-376 216-324 (419)
154 1af7_A Chemotaxis receptor met 99.0 3.3E-10 1.1E-14 115.2 8.1 100 275-375 106-251 (274)
155 3u81_A Catechol O-methyltransf 99.0 8.3E-10 2.8E-14 107.2 10.4 101 274-377 58-171 (221)
156 1yb2_A Hypothetical protein TA 99.0 5.6E-10 1.9E-14 112.3 9.3 97 273-377 109-212 (275)
157 3ntv_A MW1564 protein; rossman 99.0 5E-10 1.7E-14 109.9 8.6 98 274-376 71-176 (232)
158 2vdv_E TRNA (guanine-N(7)-)-me 99.0 7.6E-10 2.6E-14 109.4 9.9 102 274-376 49-173 (246)
159 3adn_A Spermidine synthase; am 99.0 2.4E-09 8.3E-14 109.7 13.8 122 273-395 82-217 (294)
160 3p9c_A Caffeic acid O-methyltr 99.0 8.1E-10 2.8E-14 116.1 10.4 95 273-377 200-299 (364)
161 2nyu_A Putative ribosomal RNA 99.0 9.8E-10 3.4E-14 103.6 10.0 94 273-377 21-146 (196)
162 3opn_A Putative hemolysin; str 99.0 1.3E-09 4.5E-14 107.9 11.3 154 273-457 36-201 (232)
163 2oxt_A Nucleoside-2'-O-methylt 99.0 1.3E-09 4.5E-14 110.1 11.4 95 273-377 73-186 (265)
164 2wa2_A Non-structural protein 99.0 1.4E-09 4.8E-14 110.5 11.4 95 273-377 81-194 (276)
165 1i1n_A Protein-L-isoaspartate 99.0 2.2E-09 7.5E-14 104.0 12.3 97 273-377 76-183 (226)
166 1tw3_A COMT, carminomycin 4-O- 99.0 1.2E-09 4.2E-14 113.6 11.0 100 273-377 182-289 (360)
167 1jg1_A PIMT;, protein-L-isoasp 99.0 1.1E-09 3.9E-14 107.2 10.0 107 258-377 79-190 (235)
168 2ozv_A Hypothetical protein AT 99.0 1.4E-09 4.7E-14 109.0 10.5 105 273-377 35-171 (260)
169 1xj5_A Spermidine synthase 1; 99.0 3.9E-09 1.3E-13 110.1 14.4 121 273-394 119-253 (334)
170 1r18_A Protein-L-isoaspartate( 99.0 2.2E-09 7.6E-14 104.4 11.6 109 259-377 71-195 (227)
171 2b25_A Hypothetical protein; s 99.0 8.6E-10 3E-14 114.1 9.1 99 273-377 104-220 (336)
172 3tfw_A Putative O-methyltransf 99.0 1.8E-09 6.2E-14 107.2 11.1 98 274-376 63-170 (248)
173 1fp1_D Isoliquiritigenin 2'-O- 99.0 6.6E-10 2.3E-14 116.7 8.2 93 273-376 208-306 (372)
174 1u2z_A Histone-lysine N-methyl 99.0 9.9E-10 3.4E-14 118.4 9.7 114 257-376 229-359 (433)
175 3id6_C Fibrillarin-like rRNA/T 99.0 2.4E-09 8.1E-14 106.4 11.5 113 257-376 60-181 (232)
176 3bwc_A Spermidine synthase; SA 99.0 3E-09 1E-13 109.2 12.5 104 273-377 94-211 (304)
177 2pbf_A Protein-L-isoaspartate 99.0 1.9E-09 6.4E-14 104.6 10.0 97 273-377 79-194 (227)
178 2ld4_A Anamorsin; methyltransf 99.0 2.3E-10 7.9E-15 106.7 3.4 87 273-376 11-101 (176)
179 3lst_A CALO1 methyltransferase 98.9 4.6E-10 1.6E-14 116.8 5.9 97 273-377 183-287 (348)
180 3dou_A Ribosomal RNA large sub 98.9 3.7E-09 1.3E-13 101.3 11.7 94 273-377 24-140 (191)
181 3c3p_A Methyltransferase; NP_9 98.9 2.6E-09 8.8E-14 102.6 10.5 97 274-376 56-160 (210)
182 3a27_A TYW2, uncharacterized p 98.9 2.5E-09 8.5E-14 108.0 10.8 98 273-377 118-220 (272)
183 2bm8_A Cephalosporin hydroxyla 98.9 7.7E-10 2.6E-14 109.4 6.9 93 275-376 82-187 (236)
184 3bzb_A Uncharacterized protein 98.9 3.6E-09 1.2E-13 107.1 11.9 118 254-376 63-205 (281)
185 3b3j_A Histone-arginine methyl 98.9 1.4E-09 4.8E-14 118.8 9.5 112 257-375 145-262 (480)
186 3tr6_A O-methyltransferase; ce 98.9 1.4E-09 4.9E-14 105.1 8.3 98 274-376 64-174 (225)
187 3tma_A Methyltransferase; thum 98.9 5.2E-09 1.8E-13 109.2 12.6 116 257-377 190-318 (354)
188 1g8a_A Fibrillarin-like PRE-rR 98.9 2.4E-09 8.4E-14 103.9 9.0 111 259-376 59-178 (227)
189 3giw_A Protein of unknown func 98.9 1.5E-09 5.3E-14 110.2 7.8 102 274-377 78-201 (277)
190 2yvl_A TRMI protein, hypotheti 98.9 7.4E-09 2.5E-13 101.2 12.4 98 273-377 90-191 (248)
191 2p41_A Type II methyltransfera 98.9 2.8E-09 9.4E-14 109.9 9.8 100 273-377 81-192 (305)
192 1inl_A Spermidine synthase; be 98.9 7.8E-09 2.7E-13 105.8 13.0 120 274-394 90-223 (296)
193 4azs_A Methyltransferase WBDD; 98.9 7.5E-10 2.6E-14 123.2 5.7 101 274-376 66-173 (569)
194 1fp2_A Isoflavone O-methyltran 98.9 1.3E-09 4.5E-14 113.5 6.8 93 274-377 188-289 (352)
195 3duw_A OMT, O-methyltransferas 98.9 4.3E-09 1.5E-13 101.7 9.7 98 274-376 58-167 (223)
196 2gpy_A O-methyltransferase; st 98.9 2.2E-09 7.4E-14 104.8 7.6 98 274-376 54-160 (233)
197 1iy9_A Spermidine synthase; ro 98.9 7E-09 2.4E-13 105.1 11.5 121 274-395 75-208 (275)
198 1ixk_A Methyltransferase; open 98.9 5.1E-09 1.7E-13 108.1 10.4 104 273-377 117-247 (315)
199 2o07_A Spermidine synthase; st 98.9 1E-08 3.4E-13 105.6 12.5 103 273-376 94-209 (304)
200 2h00_A Methyltransferase 10 do 98.9 8.5E-10 2.9E-14 109.1 4.3 101 274-375 65-191 (254)
201 2igt_A SAM dependent methyltra 98.9 5.6E-09 1.9E-13 108.8 10.6 118 255-376 137-272 (332)
202 2b2c_A Spermidine synthase; be 98.9 5.7E-09 1.9E-13 108.0 10.6 102 274-376 108-222 (314)
203 3r3h_A O-methyltransferase, SA 98.9 1.5E-09 5E-14 107.8 5.9 98 274-376 60-170 (242)
204 3gjy_A Spermidine synthase; AP 98.9 3.4E-09 1.1E-13 109.9 8.4 101 276-377 91-201 (317)
205 1o54_A SAM-dependent O-methylt 98.9 7.3E-09 2.5E-13 104.0 10.6 97 273-377 111-214 (277)
206 2pt6_A Spermidine synthase; tr 98.9 5.2E-09 1.8E-13 108.5 9.6 119 274-393 116-247 (321)
207 2i7c_A Spermidine synthase; tr 98.8 8.6E-09 3E-13 104.7 10.9 104 273-377 77-193 (283)
208 1uir_A Polyamine aminopropyltr 98.8 6.9E-09 2.3E-13 107.1 10.3 103 273-376 76-195 (314)
209 2hnk_A SAM-dependent O-methylt 98.8 7.9E-09 2.7E-13 101.4 10.2 98 274-376 60-181 (239)
210 4hc4_A Protein arginine N-meth 98.8 1.1E-08 3.9E-13 108.3 11.4 99 274-375 83-188 (376)
211 1sui_A Caffeoyl-COA O-methyltr 98.8 6.7E-09 2.3E-13 103.3 8.8 98 274-376 79-190 (247)
212 1ne2_A Hypothetical protein TA 98.8 3.7E-08 1.3E-12 93.6 12.9 93 273-376 50-146 (200)
213 3cbg_A O-methyltransferase; cy 98.8 1.3E-08 4.6E-13 99.8 10.1 98 274-376 72-182 (232)
214 3ajd_A Putative methyltransfer 98.8 9.8E-09 3.4E-13 103.5 9.3 104 273-377 82-212 (274)
215 4a6d_A Hydroxyindole O-methylt 98.8 1.6E-08 5.4E-13 105.8 11.1 101 273-377 178-284 (353)
216 1mjf_A Spermidine synthase; sp 98.8 9.5E-09 3.2E-13 104.3 8.8 117 274-393 75-210 (281)
217 2cmg_A Spermidine synthase; tr 98.8 3.1E-08 1.1E-12 99.8 11.9 94 274-376 72-171 (262)
218 4dmg_A Putative uncharacterize 98.8 3.4E-08 1.2E-12 105.2 12.7 114 274-388 214-338 (393)
219 2avd_A Catechol-O-methyltransf 98.8 1.6E-08 5.6E-13 97.8 9.2 98 274-376 69-179 (229)
220 1nv8_A HEMK protein; class I a 98.7 2.8E-08 9.7E-13 101.0 10.8 116 254-376 107-249 (284)
221 1zg3_A Isoflavanone 4'-O-methy 98.7 6.7E-09 2.3E-13 108.4 6.0 93 274-377 193-294 (358)
222 2h1r_A Dimethyladenosine trans 98.7 2.1E-08 7.1E-13 102.8 9.4 88 257-352 29-119 (299)
223 2b78_A Hypothetical protein SM 98.7 3.6E-08 1.2E-12 104.5 11.3 111 274-385 212-340 (385)
224 2qm3_A Predicted methyltransfe 98.7 6.6E-08 2.3E-12 101.8 13.0 106 274-383 172-285 (373)
225 1zq9_A Probable dimethyladenos 98.7 2.2E-08 7.7E-13 101.8 8.7 110 256-373 14-144 (285)
226 2yxl_A PH0851 protein, 450AA l 98.7 4.3E-08 1.5E-12 106.0 11.2 104 273-377 258-390 (450)
227 3c3y_A Pfomt, O-methyltransfer 98.7 2.2E-08 7.5E-13 98.8 7.5 98 274-376 70-181 (237)
228 3lec_A NADB-rossmann superfami 98.7 7.6E-08 2.6E-12 95.4 11.4 117 259-388 12-134 (230)
229 1wy7_A Hypothetical protein PH 98.7 1.1E-07 3.9E-12 90.4 12.3 97 273-375 48-148 (207)
230 3c0k_A UPF0064 protein YCCW; P 98.7 7E-08 2.4E-12 102.4 11.8 111 274-385 220-348 (396)
231 1sqg_A SUN protein, FMU protei 98.7 4.4E-08 1.5E-12 105.1 10.1 104 273-377 245-375 (429)
232 1wxx_A TT1595, hypothetical pr 98.7 2.3E-08 7.9E-13 105.7 7.8 108 274-382 209-331 (382)
233 3gnl_A Uncharacterized protein 98.7 9.2E-08 3.1E-12 95.6 11.4 117 259-388 12-134 (244)
234 3tm4_A TRNA (guanine N2-)-meth 98.7 5.5E-08 1.9E-12 102.6 10.3 100 274-376 217-329 (373)
235 2yx1_A Hypothetical protein MJ 98.7 1.5E-07 5.2E-12 97.8 13.5 94 274-377 195-292 (336)
236 2as0_A Hypothetical protein PH 98.6 3.6E-08 1.2E-12 104.5 8.1 110 274-384 217-343 (396)
237 3v97_A Ribosomal RNA large sub 98.6 5.2E-08 1.8E-12 111.1 9.5 103 274-377 539-658 (703)
238 3m6w_A RRNA methylase; rRNA me 98.6 4.5E-08 1.5E-12 106.4 8.5 104 273-377 100-230 (464)
239 2frx_A Hypothetical protein YE 98.6 7.6E-08 2.6E-12 105.1 9.8 103 274-377 117-247 (479)
240 3kr9_A SAM-dependent methyltra 98.6 1.7E-07 5.8E-12 92.6 11.4 116 259-388 6-128 (225)
241 1uwv_A 23S rRNA (uracil-5-)-me 98.6 2.6E-07 9E-12 99.3 12.7 113 255-377 271-390 (433)
242 3frh_A 16S rRNA methylase; met 98.6 1.1E-07 3.6E-12 94.9 8.5 101 273-375 104-205 (253)
243 3lcv_B Sisomicin-gentamicin re 98.6 2.5E-07 8.5E-12 93.2 11.2 101 273-375 131-235 (281)
244 3k6r_A Putative transferase PH 98.6 2.3E-07 8E-12 94.4 10.8 122 242-376 99-225 (278)
245 3m4x_A NOL1/NOP2/SUN family pr 98.5 1.2E-07 4E-12 103.0 8.7 104 273-377 104-235 (456)
246 2f8l_A Hypothetical protein LM 98.5 2.7E-07 9.1E-12 95.9 11.0 101 274-376 130-256 (344)
247 2jjq_A Uncharacterized RNA met 98.5 5E-07 1.7E-11 97.1 12.0 97 274-377 290-388 (425)
248 2ih2_A Modification methylase 98.5 3.5E-07 1.2E-11 96.7 9.5 108 256-377 25-165 (421)
249 2xyq_A Putative 2'-O-methyl tr 98.4 6E-07 2.1E-11 91.9 10.5 90 273-377 62-172 (290)
250 3evf_A RNA-directed RNA polyme 98.4 9.7E-07 3.3E-11 89.2 11.1 117 254-377 58-185 (277)
251 3b5i_A S-adenosyl-L-methionine 98.4 4.3E-07 1.5E-11 96.1 8.8 102 275-377 53-226 (374)
252 3gru_A Dimethyladenosine trans 98.4 1.3E-06 4.5E-11 89.6 12.1 88 257-351 37-126 (295)
253 1yub_A Ermam, rRNA methyltrans 98.4 2.4E-08 8.1E-13 98.9 -1.5 110 259-376 18-145 (245)
254 1qam_A ERMC' methyltransferase 98.4 4E-07 1.4E-11 90.3 7.2 84 256-346 16-102 (244)
255 2okc_A Type I restriction enzy 98.4 1.2E-06 4E-11 94.5 11.4 115 257-377 158-308 (445)
256 2efj_A 3,7-dimethylxanthine me 98.3 1.4E-06 4.8E-11 92.4 10.0 119 275-395 53-250 (384)
257 2qfm_A Spermine synthase; sper 98.3 1E-06 3.4E-11 92.7 8.5 118 273-392 187-328 (364)
258 3bt7_A TRNA (uracil-5-)-methyl 98.2 1.8E-06 6.2E-11 90.8 8.5 107 257-376 201-326 (369)
259 3tqs_A Ribosomal RNA small sub 98.2 3.4E-06 1.1E-10 84.7 8.5 83 257-346 16-104 (255)
260 3fut_A Dimethyladenosine trans 98.1 4.4E-06 1.5E-10 84.6 8.9 83 257-347 34-119 (271)
261 3k0b_A Predicted N6-adenine-sp 98.1 1.1E-05 3.8E-10 85.7 11.2 114 257-376 188-350 (393)
262 1m6e_X S-adenosyl-L-methionnin 98.1 2.7E-06 9.2E-11 89.5 6.2 155 275-433 52-275 (359)
263 3ldu_A Putative methylase; str 98.0 1.7E-05 5.8E-10 84.1 10.6 114 257-376 182-344 (385)
264 2b9e_A NOL1/NOP2/SUN domain fa 98.0 2E-05 6.9E-10 81.1 10.7 103 273-377 101-235 (309)
265 4gqb_A Protein arginine N-meth 98.0 8.9E-06 3.1E-10 91.3 8.4 97 274-373 357-464 (637)
266 3ldg_A Putative uncharacterize 98.0 2.8E-05 9.6E-10 82.5 11.8 102 273-376 193-343 (384)
267 2dul_A N(2),N(2)-dimethylguano 98.0 6.5E-06 2.2E-10 87.2 6.6 98 274-376 47-164 (378)
268 2ar0_A M.ecoki, type I restric 97.9 1.6E-05 5.4E-10 88.0 9.1 115 258-377 157-313 (541)
269 3axs_A Probable N(2),N(2)-dime 97.8 1.8E-05 6.1E-10 84.2 7.0 97 274-376 52-158 (392)
270 3ua3_A Protein arginine N-meth 97.8 1.7E-05 5.9E-10 89.4 7.1 117 256-373 390-531 (745)
271 3uzu_A Ribosomal RNA small sub 97.8 2.4E-05 8.1E-10 79.5 7.0 71 257-335 29-105 (279)
272 3o4f_A Spermidine synthase; am 97.8 0.00011 3.7E-09 75.2 11.8 122 273-395 82-217 (294)
273 3gcz_A Polyprotein; flavivirus 97.8 3E-05 1E-09 78.5 7.1 115 255-377 75-202 (282)
274 3ftd_A Dimethyladenosine trans 97.8 8.3E-05 2.9E-09 74.1 9.9 107 256-375 17-130 (249)
275 1qyr_A KSGA, high level kasuga 97.7 2.8E-05 9.7E-10 77.7 6.2 83 257-346 8-98 (252)
276 3eld_A Methyltransferase; flav 97.7 0.00038 1.3E-08 71.0 13.2 101 273-377 80-192 (300)
277 4auk_A Ribosomal RNA large sub 97.7 0.00035 1.2E-08 73.5 13.2 110 273-394 210-324 (375)
278 3khk_A Type I restriction-modi 97.7 9E-05 3.1E-09 82.0 9.1 116 256-377 231-396 (544)
279 2r6z_A UPF0341 protein in RSP 97.6 7.6E-06 2.6E-10 82.1 0.4 76 274-350 83-173 (258)
280 3v97_A Ribosomal RNA large sub 97.6 0.00027 9.2E-09 80.6 12.4 115 257-376 177-347 (703)
281 3s1s_A Restriction endonucleas 97.5 0.00041 1.4E-08 79.5 12.6 104 274-377 321-466 (878)
282 3lkd_A Type I restriction-modi 97.5 0.00029 9.8E-09 78.0 10.8 120 257-377 204-359 (542)
283 1m6y_A S-adenosyl-methyltransf 97.5 4E-05 1.4E-09 78.7 3.1 83 259-346 15-106 (301)
284 3ll7_A Putative methyltransfer 97.4 0.0001 3.4E-09 78.9 5.4 108 275-382 94-215 (410)
285 2oyr_A UPF0341 protein YHIQ; a 97.3 0.00014 4.7E-09 73.1 3.9 93 276-370 90-194 (258)
286 2wk1_A NOVP; transferase, O-me 97.3 0.0023 7.7E-08 65.1 12.8 128 257-394 92-259 (282)
287 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00061 2.1E-08 62.8 7.6 94 259-376 22-121 (153)
288 2px2_A Genome polyprotein [con 97.2 0.0024 8.1E-08 63.9 12.0 116 251-377 54-184 (269)
289 2qy6_A UPF0209 protein YFCK; s 97.2 0.00036 1.2E-08 69.9 5.8 102 273-374 59-211 (257)
290 3cvo_A Methyltransferase-like 97.2 0.0023 7.8E-08 62.0 11.1 93 274-375 30-153 (202)
291 3c6k_A Spermine synthase; sper 97.0 0.0016 5.5E-08 68.8 8.6 99 273-376 204-331 (381)
292 3lkz_A Non-structural protein 96.9 0.02 6.9E-07 58.3 15.2 113 255-377 79-205 (321)
293 3p8z_A Mtase, non-structural p 96.4 0.0067 2.3E-07 60.0 8.1 112 255-377 63-187 (267)
294 3ufb_A Type I restriction-modi 96.4 0.018 6.3E-07 63.3 12.0 117 256-377 203-363 (530)
295 4fzv_A Putative methyltransfer 96.3 0.0096 3.3E-07 62.5 9.1 106 273-379 147-287 (359)
296 2zig_A TTHA0409, putative modi 95.9 0.013 4.5E-07 59.3 7.6 55 257-316 223-279 (297)
297 2vz8_A Fatty acid synthase; tr 95.8 0.0042 1.4E-07 79.8 3.7 99 274-376 1240-1348(2512)
298 3r24_A NSP16, 2'-O-methyl tran 95.6 0.042 1.4E-06 56.0 9.4 96 273-381 108-222 (344)
299 1wg8_A Predicted S-adenosylmet 94.7 0.026 8.8E-07 57.3 5.0 79 259-345 11-96 (285)
300 3two_A Mannitol dehydrogenase; 90.2 0.35 1.2E-05 49.5 6.1 88 273-377 175-266 (348)
301 1g60_A Adenine-specific methyl 89.9 0.37 1.3E-05 47.5 5.8 46 257-307 200-247 (260)
302 1f8f_A Benzyl alcohol dehydrog 89.6 0.38 1.3E-05 49.6 5.9 91 273-376 189-289 (371)
303 2dph_A Formaldehyde dismutase; 87.7 0.58 2E-05 48.8 5.8 96 273-376 184-299 (398)
304 1pl8_A Human sorbitol dehydrog 87.4 0.81 2.8E-05 46.9 6.6 92 273-376 170-273 (356)
305 1pqw_A Polyketide synthase; ro 87.0 0.6 2.1E-05 43.3 4.9 90 273-376 37-137 (198)
306 3vyw_A MNMC2; tRNA wobble urid 87.0 1.1 3.9E-05 45.7 7.3 40 334-373 182-223 (308)
307 1uuf_A YAHK, zinc-type alcohol 86.7 0.79 2.7E-05 47.5 6.1 89 273-376 193-288 (369)
308 1e3j_A NADP(H)-dependent ketos 85.9 1.5 5E-05 44.8 7.6 92 273-376 167-271 (352)
309 1kol_A Formaldehyde dehydrogen 85.7 1 3.5E-05 46.8 6.4 96 273-376 184-300 (398)
310 4ej6_A Putative zinc-binding d 85.6 1.9 6.5E-05 44.5 8.3 92 273-376 181-284 (370)
311 3fpc_A NADP-dependent alcohol 85.5 1 3.5E-05 46.0 6.1 91 273-376 165-266 (352)
312 3gms_A Putative NADPH:quinone 85.1 1.3 4.3E-05 45.1 6.6 91 273-377 143-244 (340)
313 3goh_A Alcohol dehydrogenase, 85.0 0.73 2.5E-05 46.3 4.6 85 273-376 141-229 (315)
314 1i4w_A Mitochondrial replicati 84.9 0.61 2.1E-05 48.6 4.1 51 257-307 39-95 (353)
315 3s2e_A Zinc-containing alcohol 84.4 0.76 2.6E-05 46.7 4.5 91 273-376 165-263 (340)
316 1v3u_A Leukotriene B4 12- hydr 84.4 1.1 3.8E-05 45.2 5.7 90 273-376 144-244 (333)
317 3nx4_A Putative oxidoreductase 83.8 2.4 8.3E-05 42.4 8.0 87 277-376 149-241 (324)
318 3uko_A Alcohol dehydrogenase c 83.7 1.7 6E-05 44.8 7.0 92 273-376 192-295 (378)
319 2zig_A TTHA0409, putative modi 83.4 0.61 2.1E-05 46.9 3.3 43 334-376 36-97 (297)
320 1rjd_A PPM1P, carboxy methyl t 83.1 3.6 0.00012 42.3 9.0 102 274-376 97-232 (334)
321 1p0f_A NADP-dependent alcohol 83.1 2.3 7.9E-05 43.7 7.6 92 273-376 190-293 (373)
322 3uog_A Alcohol dehydrogenase; 83.0 0.98 3.3E-05 46.5 4.7 90 273-376 188-287 (363)
323 1cdo_A Alcohol dehydrogenase; 82.2 2.1 7.4E-05 43.9 6.9 92 273-376 191-294 (374)
324 2jhf_A Alcohol dehydrogenase E 82.1 2.7 9.4E-05 43.1 7.7 92 273-376 190-293 (374)
325 2fzw_A Alcohol dehydrogenase c 81.7 2.7 9.1E-05 43.2 7.4 92 273-376 189-292 (373)
326 3tos_A CALS11; methyltransfera 81.1 4.1 0.00014 40.5 8.2 55 335-393 179-233 (257)
327 2j3h_A NADP-dependent oxidored 80.9 1.8 6.1E-05 43.8 5.7 91 273-376 154-255 (345)
328 2hcy_A Alcohol dehydrogenase 1 80.7 1.4 4.8E-05 44.9 4.8 91 273-376 168-269 (347)
329 4b7c_A Probable oxidoreductase 80.5 1.3 4.6E-05 44.7 4.5 90 273-376 148-248 (336)
330 3jv7_A ADH-A; dehydrogenase, n 80.4 1.9 6.5E-05 43.8 5.7 90 273-376 170-270 (345)
331 1piw_A Hypothetical zinc-type 80.0 0.71 2.4E-05 47.4 2.3 93 273-376 178-276 (360)
332 1e3i_A Alcohol dehydrogenase, 79.5 3 0.0001 42.9 6.9 92 273-376 194-297 (376)
333 2b5w_A Glucose dehydrogenase; 79.3 5.1 0.00018 40.8 8.6 89 276-376 174-273 (357)
334 1iz0_A Quinone oxidoreductase; 78.7 1.7 5.9E-05 43.2 4.6 86 273-376 124-218 (302)
335 1g55_A DNA cytosine methyltran 77.6 3.1 0.00011 42.8 6.3 66 276-346 3-76 (343)
336 1rjw_A ADH-HT, alcohol dehydro 77.3 3.8 0.00013 41.5 6.8 90 273-376 163-261 (339)
337 1tt7_A YHFP; alcohol dehydroge 77.3 3.5 0.00012 41.4 6.5 87 277-376 153-247 (330)
338 1xa0_A Putative NADPH dependen 77.1 2.9 0.0001 42.0 5.9 87 277-376 152-246 (328)
339 4dcm_A Ribosomal RNA large sub 76.1 15 0.00051 38.1 11.1 93 275-376 39-136 (375)
340 3pvc_A TRNA 5-methylaminomethy 75.7 3.4 0.00012 46.3 6.5 39 336-374 169-209 (689)
341 3tka_A Ribosomal RNA small sub 75.7 2.2 7.6E-05 44.2 4.5 46 259-308 46-96 (347)
342 2h6e_A ADH-4, D-arabinose 1-de 75.5 2.2 7.4E-05 43.4 4.4 90 274-376 170-269 (344)
343 3jyn_A Quinone oxidoreductase; 75.5 2.2 7.4E-05 43.0 4.3 90 273-376 139-239 (325)
344 1boo_A Protein (N-4 cytosine-s 75.3 1.4 4.6E-05 45.0 2.8 43 334-376 29-84 (323)
345 4eye_A Probable oxidoreductase 74.9 3.1 0.00011 42.2 5.4 89 273-376 158-257 (342)
346 1yb5_A Quinone oxidoreductase; 74.8 3 0.0001 42.7 5.3 90 273-376 169-269 (351)
347 3qwb_A Probable quinone oxidor 74.3 2.5 8.7E-05 42.6 4.5 90 273-376 147-247 (334)
348 2eih_A Alcohol dehydrogenase; 73.5 3 0.0001 42.2 4.9 90 273-376 165-265 (343)
349 4dvj_A Putative zinc-dependent 72.9 5.5 0.00019 40.9 6.7 89 274-376 171-270 (363)
350 2cf5_A Atccad5, CAD, cinnamyl 72.8 1.5 5.1E-05 45.0 2.4 91 274-376 180-275 (357)
351 1jvb_A NAD(H)-dependent alcoho 72.5 2.7 9.3E-05 42.7 4.2 91 273-376 169-271 (347)
352 3m6i_A L-arabinitol 4-dehydrog 72.5 9.1 0.00031 38.9 8.3 92 273-376 178-283 (363)
353 2d8a_A PH0655, probable L-thre 72.2 4.6 0.00016 41.0 5.9 90 274-376 167-267 (348)
354 1vj0_A Alcohol dehydrogenase, 71.7 3.3 0.00011 42.8 4.8 92 273-376 194-298 (380)
355 2uyo_A Hypothetical protein ML 71.6 28 0.00097 35.1 11.6 100 275-377 103-219 (310)
356 1qor_A Quinone oxidoreductase; 70.3 3.4 0.00012 41.5 4.4 90 273-376 139-239 (327)
357 3ip1_A Alcohol dehydrogenase, 70.0 7.4 0.00025 40.5 7.0 92 273-376 212-318 (404)
358 3fbg_A Putative arginate lyase 69.8 5.6 0.00019 40.4 5.9 88 274-375 150-247 (346)
359 3dmg_A Probable ribosomal RNA 69.7 4.1 0.00014 42.6 4.9 87 276-376 47-139 (381)
360 2c0c_A Zinc binding alcohol de 69.5 4.9 0.00017 41.2 5.4 90 273-376 162-261 (362)
361 1g60_A Adenine-specific methyl 69.0 8.8 0.0003 37.4 7.0 42 335-376 20-74 (260)
362 4a2c_A Galactitol-1-phosphate 68.8 8.3 0.00028 38.8 6.9 92 273-377 159-261 (346)
363 2j8z_A Quinone oxidoreductase; 67.5 4.5 0.00015 41.2 4.6 90 273-376 161-261 (354)
364 1yqd_A Sinapyl alcohol dehydro 66.9 5.1 0.00018 41.1 4.9 91 274-376 187-282 (366)
365 3krt_A Crotonyl COA reductase; 65.7 8.7 0.0003 40.6 6.6 90 273-376 227-344 (456)
366 3g7u_A Cytosine-specific methy 65.4 6.7 0.00023 40.9 5.5 66 276-346 3-79 (376)
367 3ps9_A TRNA 5-methylaminomethy 64.6 10 0.00035 42.2 7.2 40 336-375 177-218 (676)
368 1zkd_A DUF185; NESG, RPR58, st 64.5 6.9 0.00023 41.2 5.3 32 275-306 81-123 (387)
369 2oo3_A Protein involved in cat 63.8 4.5 0.00015 40.8 3.6 98 276-376 93-198 (283)
370 3gqv_A Enoyl reductase; medium 63.3 12 0.00041 38.3 6.9 90 273-376 163-263 (371)
371 1boo_A Protein (N-4 cytosine-s 63.1 7.1 0.00024 39.6 5.0 46 257-307 240-287 (323)
372 2km1_A Protein DRE2; yeast, an 61.9 5.1 0.00017 36.1 3.2 43 332-374 53-96 (136)
373 3tqh_A Quinone oxidoreductase; 60.8 7.4 0.00025 38.9 4.7 89 273-376 151-245 (321)
374 4eez_A Alcohol dehydrogenase 1 60.5 21 0.00073 35.7 8.1 93 273-377 162-264 (348)
375 1wly_A CAAR, 2-haloacrylate re 60.4 6.8 0.00023 39.3 4.3 90 273-376 144-244 (333)
376 4a0s_A Octenoyl-COA reductase/ 60.2 16 0.00054 38.4 7.3 90 273-376 219-336 (447)
377 1zsy_A Mitochondrial 2-enoyl t 60.1 27 0.00092 35.4 8.8 94 273-376 166-270 (357)
378 4dup_A Quinone oxidoreductase; 59.5 4.9 0.00017 41.0 3.1 90 273-376 166-265 (353)
379 1eg2_A Modification methylase 59.2 5.8 0.0002 40.4 3.5 42 335-376 55-106 (319)
380 2cdc_A Glucose dehydrogenase g 56.1 14 0.00049 37.6 5.9 87 275-376 181-278 (366)
381 3gaz_A Alcohol dehydrogenase s 55.1 9.5 0.00032 38.6 4.4 87 273-376 149-246 (343)
382 2zb4_A Prostaglandin reductase 54.8 12 0.00042 37.9 5.1 90 273-376 157-260 (357)
383 2dq4_A L-threonine 3-dehydroge 54.6 7.3 0.00025 39.4 3.4 89 274-376 164-262 (343)
384 3qv2_A 5-cytosine DNA methyltr 53.8 44 0.0015 34.0 9.1 87 275-367 10-117 (327)
385 1eg2_A Modification methylase 51.5 12 0.00041 38.0 4.4 43 257-304 230-274 (319)
386 2py6_A Methyltransferase FKBM; 49.2 17 0.00057 38.2 5.2 44 273-316 225-274 (409)
387 3pi7_A NADH oxidoreductase; gr 49.2 24 0.00081 35.6 6.2 85 276-376 166-263 (349)
388 2vn8_A Reticulon-4-interacting 45.9 20 0.00067 36.7 5.1 91 273-376 182-280 (375)
389 4a27_A Synaptic vesicle membra 40.6 23 0.00078 35.8 4.5 87 273-376 141-238 (349)
390 4h0n_A DNMT2; SAH binding, tra 38.0 24 0.0008 36.1 4.1 66 276-346 4-77 (333)
391 3ijr_A Oxidoreductase, short c 37.8 80 0.0027 30.8 7.9 103 274-376 46-182 (291)
392 3ius_A Uncharacterized conserv 37.0 1.4E+02 0.0047 28.3 9.4 61 276-347 6-72 (286)
393 2c7p_A Modification methylase 36.8 28 0.00097 35.3 4.5 65 275-346 11-79 (327)
394 4f3n_A Uncharacterized ACR, CO 36.2 30 0.001 36.9 4.6 39 275-314 138-185 (432)
395 1gu7_A Enoyl-[acyl-carrier-pro 36.0 59 0.002 32.7 6.8 95 273-376 165-275 (364)
396 3p2y_A Alanine dehydrogenase/p 31.7 36 0.0012 35.6 4.3 94 274-375 183-301 (381)
397 3v2g_A 3-oxoacyl-[acyl-carrier 30.9 1.3E+02 0.0046 28.8 8.2 102 274-375 30-164 (271)
398 3is3_A 17BETA-hydroxysteroid d 30.6 1.6E+02 0.0054 28.1 8.6 103 274-376 17-152 (270)
399 3ubt_Y Modification methylase 30.0 70 0.0024 31.7 6.0 93 277-376 2-110 (331)
400 3ggo_A Prephenate dehydrogenas 28.0 1.7E+02 0.0057 29.2 8.4 87 275-373 33-125 (314)
401 4hp8_A 2-deoxy-D-gluconate 3-d 27.8 2.1E+02 0.0071 27.8 8.8 71 274-347 8-88 (247)
402 3fwz_A Inner membrane protein 25.9 50 0.0017 28.5 3.6 89 276-376 8-105 (140)
403 3ce6_A Adenosylhomocysteinase; 25.6 61 0.0021 35.0 4.9 87 273-377 272-362 (494)
404 3oig_A Enoyl-[acyl-carrier-pro 24.9 2.8E+02 0.0097 26.0 9.2 102 274-376 6-147 (266)
405 2vhw_A Alanine dehydrogenase; 24.5 22 0.00076 36.7 1.2 96 274-375 167-267 (377)
406 2qrv_A DNA (cytosine-5)-methyl 24.5 66 0.0022 32.2 4.6 69 273-346 14-91 (295)
407 1y1p_A ARII, aldehyde reductas 23.9 3E+02 0.01 26.4 9.4 31 274-305 10-46 (342)
408 1h2b_A Alcohol dehydrogenase; 23.8 52 0.0018 33.3 3.7 90 273-376 185-285 (359)
409 3r3s_A Oxidoreductase; structu 23.4 2E+02 0.0069 27.8 8.0 102 275-376 49-185 (294)
410 4eso_A Putative oxidoreductase 23.0 1.5E+02 0.0051 28.1 6.7 99 274-376 7-138 (255)
411 1dev_B SMAD anchor for recepto 22.8 18 0.00062 25.3 0.0 32 58-89 3-34 (41)
412 2hwk_A Helicase NSP2; rossman 22.7 60 0.0021 32.8 3.8 41 337-377 205-255 (320)
413 3iht_A S-adenosyl-L-methionine 22.5 89 0.003 28.9 4.5 29 275-303 41-73 (174)
414 1zcj_A Peroxisomal bifunctiona 22.2 3.4E+02 0.012 28.5 10.0 94 274-376 36-150 (463)
415 2f1k_A Prephenate dehydrogenas 21.6 2.2E+02 0.0074 27.1 7.7 83 277-373 2-88 (279)
416 3pxx_A Carveol dehydrogenase; 21.6 2.2E+02 0.0076 27.0 7.8 30 274-303 9-43 (287)
417 3u5t_A 3-oxoacyl-[acyl-carrier 21.5 1.6E+02 0.0056 28.1 6.7 102 275-376 27-161 (267)
418 3llv_A Exopolyphosphatase-rela 20.9 1.4E+02 0.0049 25.1 5.6 89 276-376 7-103 (141)
419 1g0o_A Trihydroxynaphthalene r 20.7 2.2E+02 0.0075 27.2 7.5 30 275-304 29-63 (283)
420 3c85_A Putative glutathione-re 20.3 2.5E+02 0.0084 24.8 7.3 93 275-376 39-139 (183)
No 1
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.64 E-value=2.2e-15 Score=149.63 Aligned_cols=160 Identities=13% Similarity=0.183 Sum_probs=109.1
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYP 335 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp 335 (572)
++.+.+.+. ..+..+|||||||+|.++..|++. +|+++|+++.++..+.. .+...+.. ..+...|.+.+|++
T Consensus 26 ~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQIAA----LKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARA-FIEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHHHHT----CCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHHHHhC----CCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEEecHHhCCCC
Confidence 445555554 246789999999999999999876 89999999998866653 33344543 44556688899999
Q ss_pred CCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccCcEEEee
Q 008262 336 SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAIWK 415 (572)
Q Consensus 336 ~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~i~iw~ 415 (572)
+++||+|+|+.+++|+ +++..+|.++.|+|||||+|++.+. .......+...+..++... ..... ..
T Consensus 101 ~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~--~~ 167 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVDN-SAPENDAFDVFYNYVEKER---------DYSHH--RA 167 (260)
T ss_dssp TTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE-EBCSSHHHHHHHHHHHHHH---------CTTCC--CC
T ss_pred CCCEEEEEEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEEc-CCCCCHHHHHHHHHHHHhc---------Ccccc--CC
Confidence 9999999999886666 8889999999999999999999853 2222233333222222111 00111 11
Q ss_pred ccchhHHHHHHhcCCCCCccC
Q 008262 416 KPTNNSCYLNREAGTIPPLCD 436 (572)
Q Consensus 416 kpl~~~c~ll~~aGF~~p~cd 436 (572)
....+...+++++||....+.
T Consensus 168 ~~~~~~~~~l~~aGf~~~~~~ 188 (260)
T 1vl5_A 168 WKKSDWLKMLEEAGFELEELH 188 (260)
T ss_dssp CBHHHHHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEE
Confidence 223456678889999765443
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.61 E-value=7.5e-16 Score=155.23 Aligned_cols=120 Identities=17% Similarity=0.250 Sum_probs=90.3
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
+..+.|.+..+ ...+|||||||+|.++..|++. +|+|+|+|+.|+. .|++ .....+...+.+.+|+
T Consensus 28 ~l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~-----~a~~-~~~v~~~~~~~e~~~~ 95 (257)
T 4hg2_A 28 ALFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIR-----QALR-HPRVTYAVAPAEDTGL 95 (257)
T ss_dssp HHHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHH-----TCCC-CTTEEEEECCTTCCCC
T ss_pred HHHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhh-----hhhh-cCCceeehhhhhhhcc
Confidence 34445554443 3468999999999999999887 8999999998773 3322 2334566668899999
Q ss_pred CCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHH
Q 008262 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHW 390 (572)
Q Consensus 335 p~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w 390 (572)
++++||+|+|..+ +||. +...++.|+.|+|||||.|++.+........++....
T Consensus 96 ~~~sfD~v~~~~~-~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~ 149 (257)
T 4hg2_A 96 PPASVDVAIAAQA-MHWF-DLDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVV 149 (257)
T ss_dssp CSSCEEEEEECSC-CTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHH
T ss_pred cCCcccEEEEeee-hhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHH
Confidence 9999999999877 5774 6789999999999999999988653333344444433
No 3
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.61 E-value=3.1e-15 Score=147.31 Aligned_cols=149 Identities=17% Similarity=0.209 Sum_probs=105.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
.+..+|||||||+|.++..+++. +|+++|+++.++..+.... ...+.. ..+...|.+.+++++++||+|+|..+++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 98 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFA-QEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAH 98 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHH-HHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHH-HHcCCCCeEEEecccccCCCCCCcEEEEEECCchh
Confidence 46789999999999999999876 8999999999886655433 334443 4455667888999999999999998877
Q ss_pred cccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccCcEEEeeccchhHHHHHHhcC
Q 008262 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAIWKKPTNNSCYLNREAG 429 (572)
Q Consensus 350 hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~i~iw~kpl~~~c~ll~~aG 429 (572)
|+ .+...+|.++.|+|||||++++.+.... ...++...+..++.... ..+. ......+...+++++|
T Consensus 99 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 99 HF-SDVRKAVREVARVLKQDGRFLLVDHYAP-EDPVLDEFVNHLNRLRD---------PSHV--RESSLSEWQAMFSANQ 165 (239)
T ss_dssp GC-SCHHHHHHHHHHHEEEEEEEEEEEECBC-SSHHHHHHHHHHHHHHC---------TTCC--CCCBHHHHHHHHHHTT
T ss_pred hc-cCHHHHHHHHHHHcCCCcEEEEEEcCCC-CChhHHHHHHHHHHhcc---------cccc--CCCCHHHHHHHHHHCC
Confidence 77 7889999999999999999999864222 22333333322221110 0111 1123345677888999
Q ss_pred CCCCcc
Q 008262 430 TIPPLC 435 (572)
Q Consensus 430 F~~p~c 435 (572)
|....+
T Consensus 166 f~~~~~ 171 (239)
T 1xxl_A 166 LAYQDI 171 (239)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 976544
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.59 E-value=7.8e-15 Score=147.95 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=78.6
Q ss_pred CCCCEEEEECCCCchhHHHhccC------CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR------NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~------~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~s 344 (572)
.++.+|||||||+|.++..|+++ +|+|+|+|+.|+..++.... ..+. ...+...|+..+|++ .||+|+|
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~-~~~~~~~v~~~~~D~~~~~~~--~~d~v~~ 145 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHID-AYKAPTPVDVIEGDIRDIAIE--NASMVVL 145 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHH-TSCCSSCEEEEESCTTTCCCC--SEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHH-hhccCceEEEeeccccccccc--cccccee
Confidence 56789999999999998888754 69999999999976664433 2332 344556678888774 6999999
Q ss_pred ccccccccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 345 SRCRINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 345 s~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+.+++++ ++. ..+|++++|+|||||.|++++.
T Consensus 146 ~~~l~~~-~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 146 NFTLQFL-EPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp ESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeeeeec-CchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 8875555 433 4789999999999999999874
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=9.8e-15 Score=144.06 Aligned_cols=185 Identities=16% Similarity=0.135 Sum_probs=118.5
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL 332 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L 332 (572)
.....+.+.+. ..+..+|||||||+|.++..+++. +|+++|+++.++.. ++++.....+...|.+.+
T Consensus 20 ~~~~~l~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~-----a~~~~~~~~~~~~d~~~~ 90 (259)
T 2p35_A 20 RPARDLLAQVP----LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEK-----AADRLPNTNFGKADLATW 90 (259)
T ss_dssp HHHHHHHTTCC----CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHH-----HHHHSTTSEEEECCTTTC
T ss_pred HHHHHHHHhcC----CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHH-----HHHhCCCcEEEECChhhc
Confidence 34455666554 245678999999999998888754 89999999987744 333333445566678888
Q ss_pred CCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccC-cE
Q 008262 333 PYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEG-YI 411 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g-~i 411 (572)
+ ++++||+|+|+.+++ +..+...+|.++.|+|||||+++++++ ...... ....+..+.. ...|....... ..
T Consensus 91 ~-~~~~fD~v~~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~~~~~-~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~ 163 (259)
T 2p35_A 91 K-PAQKADLLYANAVFQ-WVPDHLAVLSQLMDQLESGGVLAVQMP-DNLQEP-THIAMHETAD---GGPWKDAFSGGGLR 163 (259)
T ss_dssp C-CSSCEEEEEEESCGG-GSTTHHHHHHHHGGGEEEEEEEEEEEE-CCTTSH-HHHHHHHHHH---HSTTGGGC------
T ss_pred C-ccCCcCEEEEeCchh-hCCCHHHHHHHHHHhcCCCeEEEEEeC-CCCCcH-HHHHHHHHhc---CcchHHHhcccccc
Confidence 8 788999999987744 448889999999999999999999974 222211 1111222211 11232221110 00
Q ss_pred EEeeccchhHHHHHHhcCCCCCccCCCCCCccccCCCHHHHHhhcccCC
Q 008262 412 AIWKKPTNNSCYLNREAGTIPPLCDPDDNPDNVWYVDLKACITRLPENG 460 (572)
Q Consensus 412 ~iw~kpl~~~c~ll~~aGF~~p~cd~~~~~~~~wY~~l~~~L~~L~~~~ 460 (572)
........+...+++++||..... .......|.+...++..++..|
T Consensus 164 ~~~~~~~~~~~~~l~~aGf~v~~~---~~~~~~~~~~~~~~~~~l~~~~ 209 (259)
T 2p35_A 164 RKPLPPPSDYFNALSPKSSRVDVW---HTVYNHPMKDADSIVEWVKGTG 209 (259)
T ss_dssp -CCCCCHHHHHHHHGGGEEEEEEE---EEEEEEEESCHHHHHHHHTTTT
T ss_pred ccCCCCHHHHHHHHHhcCCceEEE---EEEeeeccCCchHHhhhhhcCc
Confidence 001122334677889999964332 2344567789999999998444
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.57 E-value=3.1e-14 Score=141.90 Aligned_cols=122 Identities=24% Similarity=0.333 Sum_probs=95.4
Q ss_pred cccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEE
Q 008262 250 QFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMV 324 (572)
Q Consensus 250 ~f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~ 324 (572)
.+........+.+.+.+. ..+..+|||||||+|.++..+++. +|+++|+++.++..+.. .+...+.. ..+
T Consensus 41 ~~~~~~~~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~~~~ 115 (273)
T 3bus_A 41 SVDDATDRLTDEMIALLD----VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANA-RATAAGLANRVTF 115 (273)
T ss_dssp CHHHHHHHHHHHHHHHSC----CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEE
T ss_pred CHHHHHHHHHHHHHHhcC----CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-HHHhcCCCcceEE
Confidence 334455666677777665 246789999999999999888753 89999999988865543 33334442 445
Q ss_pred EeccccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 325 AAFATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 325 ~~~d~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
...|...+|+++++||+|+|..+++|+ .+...+|.++.|+|||||+++++++
T Consensus 116 ~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 116 SYADAMDLPFEDASFDAVWALESLHHM-PDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp EECCTTSCCSCTTCEEEEEEESCTTTS-SCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EECccccCCCCCCCccEEEEechhhhC-CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 566788899999999999999886666 7889999999999999999999874
No 7
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.56 E-value=2.9e-14 Score=144.21 Aligned_cols=115 Identities=14% Similarity=0.200 Sum_probs=89.0
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~ 331 (572)
.+++.+.+.+..+ .+..+|||||||+|.++..|++. +|+|+|+++.++..++.. +...+....+...|...
T Consensus 8 ~~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 8 DYVSFLVNTVWKI---TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAREL-FRLLPYDSEFLEGDATE 83 (284)
T ss_dssp HHHHHHHHTTSCC---CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHH-HHSSSSEEEEEESCTTT
T ss_pred HHHHHHHHHHhcc---CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEEcchhh
Confidence 4455555555432 46789999999999999999864 699999999888655433 22333344566667888
Q ss_pred CCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++ ++||+|+|..+++|+ .+...++++++|+|||||++++..+
T Consensus 84 ~~~~-~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 84 IELN-DKYDIAICHAFLLHM-TTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp CCCS-SCEEEEEEESCGGGC-SSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cCcC-CCeeEEEECChhhcC-CCHHHHHHHHHHHcCCCCEEEEEec
Confidence 8884 799999999886666 8889999999999999999999874
No 8
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.54 E-value=9.6e-14 Score=132.61 Aligned_cols=116 Identities=15% Similarity=0.188 Sum_probs=90.9
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccc
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFAT 329 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~ 329 (572)
.....+.+.+.+. .+..+|||||||+|.++..|++. +|+++|+++.++..+..... ..+. ...+...|.
T Consensus 29 ~~~~~~~~~~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~-~~~~~~~~~~~~~d~ 102 (219)
T 3dlc_A 29 YPIIAENIINRFG-----ITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIA-DANLNDRIQIVQGDV 102 (219)
T ss_dssp HHHHHHHHHHHHC-----CCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEECBT
T ss_pred cHHHHHHHHHhcC-----CCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHH-hccccCceEEEEcCH
Confidence 4455556655554 12239999999999999988874 89999999988866654333 3343 244566678
Q ss_pred cCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 330 RRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..+++++++||+|+|..+++|+ .+...+|.++.|+|||||.+++++.
T Consensus 103 ~~~~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 103 HNIPIEDNYADLIVSRGSVFFW-EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp TBCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHCCCCcccccEEEECchHhhc-cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 8899999999999999887777 8889999999999999999999873
No 9
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.52 E-value=7.7e-14 Score=137.72 Aligned_cols=109 Identities=17% Similarity=0.284 Sum_probs=85.9
Q ss_pred HHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCC
Q 008262 261 QIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQ 337 (572)
Q Consensus 261 ~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~ 337 (572)
.+.+.+. ..+..+|||||||+|.++..+++. +|+|+|+++.++..+..... .....+...|.+.++++++
T Consensus 35 ~l~~~~~----~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~ 107 (253)
T 3g5l_A 35 ELKKMLP----DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPD 107 (253)
T ss_dssp HHHTTCC----CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTT
T ss_pred HHHHhhh----ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCC
Confidence 4444544 246789999999999999998876 79999999987744332211 2334566667888999899
Q ss_pred CeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 338 AFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 338 sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+||+|+|..+++|+ .+...+|+++.|+|||||.++++..
T Consensus 108 ~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 108 AYNVVLSSLALHYI-ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeEEEEEchhhhhh-hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 99999999886666 8889999999999999999999863
No 10
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=2.6e-14 Score=143.71 Aligned_cols=170 Identities=9% Similarity=0.055 Sum_probs=108.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
.+..+|||||||+|.++..+++. +|+|+|+++.++..+ +++.....+...|.+.+++ +++||+|+|+.+++|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a-----~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKA-----RQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHW 129 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHH-----HhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhh
Confidence 45679999999999999988765 899999999887443 3332233455567888887 589999999877554
Q ss_pred ccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccCcEEEeeccchhHHHHHHhcCC
Q 008262 351 WTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAIWKKPTNNSCYLNREAGT 430 (572)
Q Consensus 351 w~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~i~iw~kpl~~~c~ll~~aGF 430 (572)
..++..+|.++.|+|||||++++.++ ......++...+..... ...|......... ......+...+++++||
T Consensus 130 -~~d~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~l~~aGf 202 (279)
T 3ccf_A 130 -VKEPEAAIASIHQALKSGGRFVAEFG-GKGNIKYILEALYNALE---TLGIHNPQALNPW--YFPSIGEYVNILEKQGF 202 (279)
T ss_dssp -CSCHHHHHHHHHHHEEEEEEEEEEEE-CTTTTHHHHHHHHHHHH---HHTCCCGGGGCCC--CCCCHHHHHHHHHHHTE
T ss_pred -CcCHHHHHHHHHHhcCCCcEEEEEec-CCcchHHHHHHHHHHHH---hcCCccccCcCce--eCCCHHHHHHHHHHcCC
Confidence 48899999999999999999999874 44444444444432221 1122111100000 11123346678889999
Q ss_pred CCCccCCCCCCccccCC-CHHHHHhhcc
Q 008262 431 IPPLCDPDDNPDNVWYV-DLKACITRLP 457 (572)
Q Consensus 431 ~~p~cd~~~~~~~~wY~-~l~~~L~~L~ 457 (572)
....+. .......+. +...++..++
T Consensus 203 ~~~~~~--~~~~~~~~~~~~~~~~~~l~ 228 (279)
T 3ccf_A 203 DVTYAA--LFNRPTTLAEGEFGMANWIQ 228 (279)
T ss_dssp EEEEEE--EEECCEECSSGGGHHHHHHH
T ss_pred EEEEEE--EecccccccCCHHHHHHHHH
Confidence 765443 222333343 3444444443
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=5.4e-14 Score=138.65 Aligned_cols=117 Identities=9% Similarity=0.027 Sum_probs=92.3
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEecc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d 328 (572)
.....++.+.+.+. ..+..+|||||||+|.++..|++. +|+|+|+++.++..+.. .+...++. ..+...|
T Consensus 20 ~~~~~~~~l~~~~~----~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~v~~~~~d 94 (256)
T 1nkv_A 20 FTEEKYATLGRVLR----MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKR-RAEELGVSERVHFIHND 94 (256)
T ss_dssp CCHHHHHHHHHHTC----CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESC
T ss_pred CCHHHHHHHHHhcC----CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHhcCCCcceEEEECC
Confidence 34556677777665 246689999999999999888754 89999999998866653 33444543 4556667
Q ss_pred ccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 329 TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 329 ~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+.+++ +++||+|+|..+++|+ .+...+|.++.|+|||||+++++++
T Consensus 95 ~~~~~~-~~~fD~V~~~~~~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 95 AAGYVA-NEKCDVAACVGATWIA-GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CTTCCC-SSCEEEEEEESCGGGT-SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred hHhCCc-CCCCCEEEECCChHhc-CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 888887 7899999998887666 6889999999999999999999863
No 12
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.51 E-value=9e-14 Score=139.01 Aligned_cols=102 Identities=18% Similarity=0.316 Sum_probs=83.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCCCCCeeEEEeccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
.+..+|||||||+|.++..+++. +|+++|+++.++..+... +...+.. ..+...|...+++++++||+|+|+.+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAREN-TEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 46789999999999999888754 799999999888665543 3334443 44556678889999999999999988
Q ss_pred cccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 348 RINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 348 l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.|+ .++..+|.++.|+|||||++++..
T Consensus 115 l~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 LEHL-QSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhc-CCHHHHHHHHHHHcCCCcEEEEEE
Confidence 6666 888999999999999999999986
No 13
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.51 E-value=1.1e-13 Score=133.50 Aligned_cols=149 Identities=12% Similarity=0.122 Sum_probs=98.8
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
+..+|||||||+|.++..|++. +|+|+|+++.++..+ +++.. ...+...|...++++ ++||+|+|..+++|
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a-----~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIA-----KEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHH-----HHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHH-----HHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 5679999999999999999876 899999999877443 33322 334556678888888 99999999988666
Q ss_pred ccCChHH--HHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccCcEEEeeccchhHHHHHHhc
Q 008262 351 WTRDDGI--LLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAIWKKPTNNSCYLNREA 428 (572)
Q Consensus 351 w~~d~~~--~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~i~iw~kpl~~~c~ll~~a 428 (572)
+ .+... +|.++.|+|||||.++++++ ..............+... .+....... ...+..+..+...+++++
T Consensus 119 ~-~~~~~~~~l~~~~~~LkpgG~l~i~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~l~~a 191 (220)
T 3hnr_A 119 L-TDDEKNVAIAKYSQLLNKGGKIVFADT-IFADQDAYDKTVEAAKQR----GFHQLANDL-QTEYYTRIPVMQTIFENN 191 (220)
T ss_dssp S-CHHHHHHHHHHHHHHSCTTCEEEEEEE-CBSSHHHHHHHHHHHHHT----TCHHHHHHH-HHSCCCBHHHHHHHHHHT
T ss_pred C-ChHHHHHHHHHHHHhcCCCCEEEEEec-cccChHHHHHHHHHHHhC----CCccchhhc-chhhcCCHHHHHHHHHHC
Confidence 6 66655 99999999999999999974 444444433332222111 111000000 000111334567788999
Q ss_pred CCCCCcc
Q 008262 429 GTIPPLC 435 (572)
Q Consensus 429 GF~~p~c 435 (572)
||.....
T Consensus 192 Gf~v~~~ 198 (220)
T 3hnr_A 192 GFHVTFT 198 (220)
T ss_dssp TEEEEEE
T ss_pred CCEEEEe
Confidence 9965433
No 14
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.50 E-value=8.3e-14 Score=135.52 Aligned_cols=102 Identities=13% Similarity=0.083 Sum_probs=81.1
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
+..+|||||||+|.++..|++. +|+|+|+++.++..+ +++.. ...+...+.+.+ +++++||+|+|..+++|
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a-----~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHA-----QGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHH-----HHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHH-----HHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHh
Confidence 4568999999999999999877 899999999877443 33322 344555567776 46789999999998777
Q ss_pred ccCChHHHHHHHH-HhccCCeEEEEEECCCCCCH
Q 008262 351 WTRDDGILLLEVN-RMLRAGGYFAWAAQPVYKHE 383 (572)
Q Consensus 351 w~~d~~~~L~ei~-RvLKPGG~lv~st~P~~~tl 383 (572)
+ .++..+|+++. |+|||||+++++++ .....
T Consensus 116 ~-~~~~~~l~~~~~~~LkpgG~l~i~~~-~~~~~ 147 (250)
T 2p7i_A 116 I-DDPVALLKRINDDWLAEGGRLFLVCP-NANAV 147 (250)
T ss_dssp C-SSHHHHHHHHHHTTEEEEEEEEEEEE-CTTCH
T ss_pred h-cCHHHHHHHHHHHhcCCCCEEEEEcC-ChHHH
Confidence 7 78899999999 99999999999974 44443
No 15
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.50 E-value=1.3e-13 Score=137.43 Aligned_cols=117 Identities=18% Similarity=0.192 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccc
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT 329 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~ 329 (572)
.......+.+.+.. ..+..+|||||||+|.++..+++. +|+|+|+++.++..+.. .+...++. ..+...|.
T Consensus 30 ~~~~~~~~l~~l~~---~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~ 105 (267)
T 3kkz_A 30 SPEVTLKALSFIDN---LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNR-NARQSGLQNRVTGIVGSM 105 (267)
T ss_dssp CHHHHHHHHTTCCC---CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCT
T ss_pred CHHHHHHHHHhccc---CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHH-HHHHcCCCcCcEEEEcCh
Confidence 34455566666652 246789999999999999999876 79999999998866654 33444543 45666688
Q ss_pred cCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 330 RRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+.+++++++||+|+|..+++|+ +...+|+++.++|||||++++++.
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNI--GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGT--CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceec--CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8899989999999999887777 789999999999999999999863
No 16
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.50 E-value=1e-13 Score=140.32 Aligned_cols=124 Identities=16% Similarity=0.176 Sum_probs=95.0
Q ss_pred cccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC--CcEEEe
Q 008262 252 IHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAA 326 (572)
Q Consensus 252 ~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~ 326 (572)
........+.+.+.++......+..+|||||||+|.++..|++. +|+|+|+++.++..+.... ...+. ...+..
T Consensus 60 ~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~~ 138 (297)
T 2o57_A 60 REASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYN-NQAGLADNITVKY 138 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHHTCTTTEEEEE
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHH-HhcCCCcceEEEE
Confidence 34455666777776610001246689999999999999888764 8999999998886665433 33343 244556
Q ss_pred ccccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 327 FATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 327 ~d~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.|...+|+++++||+|+|..+++|+ .+...+|.++.|+|||||+|+++++
T Consensus 139 ~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 139 GSFLEIPCEDNSYDFIWSQDAFLHS-PDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CCTTSCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCcccCCCCCCCEeEEEecchhhhc-CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 6788899999999999999887777 7789999999999999999999964
No 17
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.50 E-value=8.2e-14 Score=135.72 Aligned_cols=116 Identities=13% Similarity=0.220 Sum_probs=86.9
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecccc
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e 330 (572)
.....+.+.+.+.. ..+..+|||||||+|.++..+++. +|+++|+++.++..+..... ..+ ...+...|..
T Consensus 28 ~~~~~~~~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~-~~~~~~~d~~ 102 (234)
T 3dtn_A 28 FDDFYGVSVSIASV---DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFR-GNL-KVKYIEADYS 102 (234)
T ss_dssp HHHHHHHHHHTCCC---SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTC-SCT-TEEEEESCTT
T ss_pred HHHHHHHHHHHhhc---CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhc-cCC-CEEEEeCchh
Confidence 34445556666652 245689999999999999888764 79999999987754432211 112 3455666788
Q ss_pred CCCCCCCCeeEEEeccccccccCChH--HHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d~~--~~L~ei~RvLKPGG~lv~st~ 377 (572)
.++++ ++||+|+|..+++|+ .+.. .+|+++.|+|||||.+++++.
T Consensus 103 ~~~~~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 103 KYDFE-EKYDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp TCCCC-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCC-CCceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 88887 899999999887777 5544 599999999999999999975
No 18
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.50 E-value=1.3e-13 Score=135.89 Aligned_cols=117 Identities=16% Similarity=0.259 Sum_probs=92.8
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEecc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d 328 (572)
+.......+.+.+..+ .+..+|||||||+|.++..+++. +|+|+|+++.++..+.. .+...++. ..+...|
T Consensus 29 ~~~~~~~~~l~~l~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d 104 (257)
T 3f4k_A 29 GSPEATRKAVSFINEL---TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNE-NAVKANCADRVKGITGS 104 (257)
T ss_dssp CCHHHHHHHHTTSCCC---CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECC
T ss_pred CCHHHHHHHHHHHhcC---CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECC
Confidence 3445566666666532 45679999999999999888765 89999999988866553 34444544 4556667
Q ss_pred ccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 329 TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 329 ~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.+.+++++++||+|+|..+++|+ +...+|.++.|+|||||++++++
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNI--GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCC--CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEecChHhhc--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 88999999999999999887776 68899999999999999999996
No 19
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.49 E-value=5.9e-14 Score=137.83 Aligned_cols=119 Identities=15% Similarity=0.174 Sum_probs=89.3
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~ 331 (572)
......+.+.+.++.+ .+..+|||||||+|.++..+++. +|+|+|+++.++ +.++++ ..+...+...
T Consensus 24 ~~~~~~~~~~~~l~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~---~~~~~~d~~~ 92 (240)
T 3dli_A 24 SRELVKARLRRYIPYF---KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMI-----KFCEGK---FNVVKSDAIE 92 (240)
T ss_dssp CHHHHHHHHGGGGGGT---TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHH-----HHHHTT---SEEECSCHHH
T ss_pred CHHHHHHHHHHHHhhh---cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHH-----HHHHhh---cceeeccHHH
Confidence 4455566666665543 45688999999999999888775 899999998766 444444 3344445555
Q ss_pred C--CCCCCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEEEEECCCCCCHHH
Q 008262 332 L--PYPSQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAAQPVYKHEEA 385 (572)
Q Consensus 332 L--Pfp~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~P~~~tl~E 385 (572)
+ ++++++||+|+|..+++|+ .+. ..+|+++.|+|||||+++++++ ......+
T Consensus 93 ~~~~~~~~~fD~i~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~ 148 (240)
T 3dli_A 93 YLKSLPDKYLDGVMISHFVEHL-DPERLFELLSLCYSKMKYSSYIVIESP-NPTSLYS 148 (240)
T ss_dssp HHHTSCTTCBSEEEEESCGGGS-CGGGHHHHHHHHHHHBCTTCCEEEEEE-CTTSHHH
T ss_pred HhhhcCCCCeeEEEECCchhhC-CcHHHHHHHHHHHHHcCCCcEEEEEeC-CcchhHH
Confidence 4 7888999999999887777 543 7999999999999999999975 4454443
No 20
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.48 E-value=2.6e-13 Score=131.21 Aligned_cols=160 Identities=14% Similarity=0.172 Sum_probs=103.1
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC------CcEEEeccccCCCCCCCCeeEEEec
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA------PAMVAAFATRRLPYPSQAFDLIHCS 345 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~------~~~~~~~d~e~LPfp~~sFDlI~ss 345 (572)
+..+|||+|||+|.++..+++. +|+++|+++.++..++. .+...+. ...+...+...+++++++||+|+|.
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAET-AARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHH-HHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4679999999999999998876 89999999987754432 2222232 1345556788889889999999999
Q ss_pred cccccccCChH---HHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhh-hhhhchhhhh-ccC--cEEEeeccc
Q 008262 346 RCRINWTRDDG---ILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDL-TTRLCWELVK-KEG--YIAIWKKPT 418 (572)
Q Consensus 346 ~~l~hw~~d~~---~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~-~~~l~w~~v~-~~g--~i~iw~kpl 418 (572)
.+++|+ .++. .+|+++.|+|||||.+++.++............+...... .....|.... ..+ ....+....
T Consensus 109 ~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 109 AFLTSV-PDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp SCGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred chhhcC-CCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 887766 6666 8999999999999999999753333333333322111111 0000010000 000 122233445
Q ss_pred hhHHHHHHhcCCCCCcc
Q 008262 419 NNSCYLNREAGTIPPLC 435 (572)
Q Consensus 419 ~~~c~ll~~aGF~~p~c 435 (572)
.+...+++++||....+
T Consensus 188 ~~l~~ll~~aGf~~~~~ 204 (235)
T 3sm3_A 188 KELVFLLTDCRFEIDYF 204 (235)
T ss_dssp HHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHHHcCCEEEEE
Confidence 56777889999966443
No 21
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.48 E-value=4e-14 Score=136.64 Aligned_cols=104 Identities=9% Similarity=-0.037 Sum_probs=78.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHH------------cCCCcEEEeccccCCCCCC-C
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALE------------RGAPAMVAAFATRRLPYPS-Q 337 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~------------rg~~~~~~~~d~e~LPfp~-~ 337 (572)
.+..+|||+|||+|..+..|+++ +|+|+|+|+.|+..++.+.... ......+...|+..+++.+ +
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 35689999999999999999875 8999999999986654322110 1223456666888888765 8
Q ss_pred CeeEEEeccccccccCC-hHHHHHHHHHhccCCeEEEEEE
Q 008262 338 AFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 338 sFDlI~ss~~l~hw~~d-~~~~L~ei~RvLKPGG~lv~st 376 (572)
+||+|++..+++|+..+ ...++++++|+|||||++++.+
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999998777666432 2479999999999999855543
No 22
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.47 E-value=7.1e-14 Score=141.88 Aligned_cols=104 Identities=10% Similarity=0.026 Sum_probs=74.7
Q ss_pred CCCCEEEEECCCCchhHHH----hcc----CC--eEEEeCCccchHHHHHHHHHHcCCCcE---EEeccccCCC------
Q 008262 273 HHIRVVMDAGCGVASFGAY----LLP----RN--VITMSIAPKDVHENQIQFALERGAPAM---VAAFATRRLP------ 333 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~----L~~----~~--V~gvDiSp~dl~~a~~~~A~~rg~~~~---~~~~d~e~LP------ 333 (572)
.+..+|||||||+|.++.. ++. .. ++++|+|+.|+..+..+.+...++... +...+.+.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3457899999999976543 322 12 399999999997766444332244332 2233334433
Q ss_pred CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++++||+|+|+.+++|+ +|+..+|++++|+|||||+|++...
T Consensus 131 ~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYV-KDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp TCCCCEEEEEEESCGGGC-SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeec-CCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 668999999999886655 8999999999999999999999853
No 23
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.47 E-value=2e-13 Score=134.69 Aligned_cols=171 Identities=15% Similarity=0.120 Sum_probs=108.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
.+..+|||||||+|.++..+++. +|+|+|+++.++..+.... ........+...|.+.+++++++||+|+|..+++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~- 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH- 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG-
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCchh-
Confidence 45689999999999999998876 8999999998885544332 1112234556667888999899999999987754
Q ss_pred ccCChHHHHHHHHHhccCCeEEEEEECCCC--CCHHHHHHHHHHHHhhhhhhchhhhhccCcEEEeeccchhHHHHHHhc
Q 008262 351 WTRDDGILLLEVNRMLRAGGYFAWAAQPVY--KHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAIWKKPTNNSCYLNREA 428 (572)
Q Consensus 351 w~~d~~~~L~ei~RvLKPGG~lv~st~P~~--~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~i~iw~kpl~~~c~ll~~a 428 (572)
+..+...++.++.|+|||||++++.. +.. .....+...+..+... .++. ..... ......+...+++++
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~--~~~~~~~~~~~l~~~ 186 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEGW-DQAEASPEWTLQERWRAFAAE---EGFP---VERGL--HAKRLKEVEEALRRL 186 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEE-EEECCCHHHHHHHHHHHHHHH---HTCC---CCCCH--HHHHHHHHHHHHHHT
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEEe-cCCCccHHHHHHHHHHHHHHH---hCCC---ccccc--ccCCHHHHHHHHHHc
Confidence 44788999999999999999999882 122 1112233333332221 1111 00000 011122355678899
Q ss_pred CCCCCccCCCCCCccccCCCHHHHHhhcc
Q 008262 429 GTIPPLCDPDDNPDNVWYVDLKACITRLP 457 (572)
Q Consensus 429 GF~~p~cd~~~~~~~~wY~~l~~~L~~L~ 457 (572)
||....+. ... .....+...++..+.
T Consensus 187 Gf~~~~~~--~~~-~~~~~~~~~~~~~~~ 212 (263)
T 2yqz_A 187 GLKPRTRE--VAR-WREERTPREALEALS 212 (263)
T ss_dssp TCCCEEEE--EEE-EEEEECHHHHHHHHH
T ss_pred CCCcceEE--Eee-eecCCCHHHHHHHHH
Confidence 99765432 111 112346777777665
No 24
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.47 E-value=1.6e-13 Score=135.38 Aligned_cols=115 Identities=18% Similarity=0.236 Sum_probs=89.0
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcC---CCcEEEec
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERG---APAMVAAF 327 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg---~~~~~~~~ 327 (572)
+.....+.+.+.+. ..+..+|||||||+|.++..+++. +|+|+|+++.++ +.++++. ....+...
T Consensus 39 ~~~~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~~~~ 109 (266)
T 3ujc_A 39 GGLEATKKILSDIE----LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIV-----NMANERVSGNNKIIFEAN 109 (266)
T ss_dssp THHHHHHHHTTTCC----CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHH-----HHHHHTCCSCTTEEEEEC
T ss_pred chHHHHHHHHHhcC----CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHhhcCCCeEEEEC
Confidence 44455566665554 346789999999999999888764 899999999776 4444442 23445566
Q ss_pred cccCCCCCCCCeeEEEecccccccc-CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 328 ATRRLPYPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 328 d~e~LPfp~~sFDlI~ss~~l~hw~-~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|...+++++++||+|+|..+++|+. .+...+|.++.|+|||||.+++.++
T Consensus 110 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 110 DILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 7888899999999999998866663 4557999999999999999999974
No 25
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=1.2e-13 Score=137.78 Aligned_cols=109 Identities=15% Similarity=0.128 Sum_probs=88.0
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
.+.+.+.+.+. ..+..+|||||||+|.++..|++. +|+|+|+++.++ +.++++. ...+...|.+.+++
T Consensus 21 ~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~-~~~~~~~d~~~~~~ 90 (261)
T 3ege_A 21 RIVNAIINLLN----LPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMR-----QQAVVHP-QVEWFTGYAENLAL 90 (261)
T ss_dssp HHHHHHHHHHC----CCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHH-----HSSCCCT-TEEEECCCTTSCCS
T ss_pred HHHHHHHHHhC----CCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHH-----HHHHhcc-CCEEEECchhhCCC
Confidence 45666666665 246789999999999999999876 899999998765 3333332 44566678888999
Q ss_pred CCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 335 p~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++||+|+|..+++|+ .+...+|++++|+|| ||++++.+.
T Consensus 91 ~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 91 PDKSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp CTTCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CCCCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 99999999999887777 889999999999999 998888764
No 26
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.46 E-value=2.5e-13 Score=130.73 Aligned_cols=103 Identities=18% Similarity=0.218 Sum_probs=84.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp~~sFDlI~ss~ 346 (572)
.+..+|||+|||+|.++..+++. +|+++|+++.++..+...... .+.. ..+...|...+++++++||+|+|+.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK-LGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-HTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-cCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 45679999999999988887653 799999999988766644433 3433 4556667888899999999999998
Q ss_pred ccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++|+ .+...++.++.|+|||||.+++.+.
T Consensus 115 ~l~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 115 TFHEL-SEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp CGGGC-SSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhc-CCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 87777 7889999999999999999999863
No 27
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.46 E-value=1e-13 Score=136.40 Aligned_cols=118 Identities=17% Similarity=0.214 Sum_probs=87.9
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEecccc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e 330 (572)
....++..+.+.+. ..+..+|||||||+|.++..|++. +|+++|+++.++..+...... . ....+...+.+
T Consensus 77 ~~~~~~~~~l~~l~----~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~-~~~~~~~~d~~ 150 (254)
T 1xtp_A 77 VDIEGSRNFIASLP----GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-M-PVGKFILASME 150 (254)
T ss_dssp HHHHHHHHHHHTST----TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-S-SEEEEEESCGG
T ss_pred HHHHHHHHHHHhhc----ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc-C-CceEEEEccHH
Confidence 33445555555554 345789999999999999888765 599999999887544322211 1 22345556778
Q ss_pred CCCCCCCCeeEEEeccccccccC-ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTR-DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~-d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+++++++||+|+|..+++|+.. +...+|.++.|+|||||++++++.
T Consensus 151 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp GCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 88988899999999998777742 357999999999999999999973
No 28
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.46 E-value=2.6e-13 Score=132.47 Aligned_cols=98 Identities=21% Similarity=0.239 Sum_probs=81.9
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHc--CCCcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALER--GAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~r--g~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
+..+|||||||+|.++..+++. +|+++|+++.++. .++++ .....+...|...+++++++||+|+|..+++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQ-----KGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHH-----HHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHH-----HHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 4579999999999999999877 8999999987763 34433 2334455667888999899999999998877
Q ss_pred cccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 350 hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|+ .+...+|.++.++|||||++++++.
T Consensus 128 ~~-~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 128 WT-EEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp SS-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hc-cCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 77 8889999999999999999999974
No 29
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=1.4e-13 Score=131.24 Aligned_cols=98 Identities=13% Similarity=0.104 Sum_probs=82.1
Q ss_pred CCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccccc
Q 008262 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~ 352 (572)
..+|||||||+|.++..|++. +|+|+|+++.++ +.++++.....+...|...+++++++||+|+|..+++|+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLV-----ELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHH-----HHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHH-----HHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC
Confidence 478999999999999999876 899999998877 4444444445566677888888889999999998888874
Q ss_pred -CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 353 -RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 353 -~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+...+|+++.++|||||+++++.+
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3668999999999999999999974
No 30
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.45 E-value=2.6e-13 Score=135.09 Aligned_cols=98 Identities=20% Similarity=0.358 Sum_probs=82.2
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
+..+|||||||+|.++..|++. +|+|+|+++.++..+ +++.... +...+.+.+++++++||+|+|..+++|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a-----~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVA-----REKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHH-----HHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHH-----HhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 5679999999999999999876 799999999877443 3333223 5556788899988999999998888899
Q ss_pred cCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 352 TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 352 ~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..+...+|.++.|+|||||.++++++
T Consensus 128 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 128 VENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 78889999999999999999999874
No 31
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.44 E-value=1e-13 Score=146.77 Aligned_cols=169 Identities=15% Similarity=0.115 Sum_probs=111.0
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHc----C----CCcEEEeccccCC------C
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALER----G----APAMVAAFATRRL------P 333 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~r----g----~~~~~~~~d~e~L------P 333 (572)
.+..+|||||||+|.++..|++. +|+|+|+++.++..+........ | ....+...|.+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 35689999999999988877653 79999999988866554333210 2 2345556677776 8
Q ss_pred CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccCcEEE
Q 008262 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAI 413 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~i~i 413 (572)
+++++||+|+|+.+++|+ .+...+|+++.|+|||||+|++++........+........ |.... .+
T Consensus 162 ~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~--------~~~~~-~~---- 227 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS-TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPIL--------YGECL-GG---- 227 (383)
T ss_dssp CCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHH--------HHTTC-TT----
T ss_pred CCCCCEEEEEEccchhcC-CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHH--------hhccc-cc----
Confidence 999999999999875555 88999999999999999999998642222211111100000 10000 00
Q ss_pred eeccchhHHHHHHhcCCCCCccCCCCCCccccCCCHHHHHhhcc
Q 008262 414 WKKPTNNSCYLNREAGTIPPLCDPDDNPDNVWYVDLKACITRLP 457 (572)
Q Consensus 414 w~kpl~~~c~ll~~aGF~~p~cd~~~~~~~~wY~~l~~~L~~L~ 457 (572)
.....+...+++++||...... ........+.++..++.++.
T Consensus 228 -~~~~~~~~~ll~~aGF~~v~~~-~~~~~~~~~~~~~~~l~~~~ 269 (383)
T 4fsd_A 228 -ALYLEDFRRLVAEAGFRDVRLV-SVGPVDVSDPQLRKLVPDVQ 269 (383)
T ss_dssp -CCBHHHHHHHHHHTTCCCEEEE-EEEEECCCCHHHHTTSTTCC
T ss_pred -CCCHHHHHHHHHHCCCceEEEE-eccccccCCHhHHHHhcCCc
Confidence 0112356678889999765332 24556667777777777766
No 32
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.44 E-value=5.6e-13 Score=127.76 Aligned_cols=97 Identities=21% Similarity=0.263 Sum_probs=80.4
Q ss_pred CCCEEEEECCCCchhHHHhccC-CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~ 352 (572)
+..+|||||||+|.++..+ .. +|+++|+++.++.. ++++.....+...+.+.+++++++||+|+|..+++|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~-----a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAV-----GRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFV- 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHH-----HHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTC-
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHH-----HHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhc-
Confidence 5689999999999999988 55 89999999987744 3333233445566788899989999999999886666
Q ss_pred CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 353 RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 353 ~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.++..+|.++.|+|||||.++++++
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEec
Confidence 7889999999999999999999975
No 33
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=4.4e-13 Score=136.17 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=81.4
Q ss_pred CCCCEEEEECCCCchhHHHhc---cC--CeEEEeCCccchHHHHHHHHHH--cCCCcEEEeccccCCCCCC------CCe
Q 008262 273 HHIRVVMDAGCGVASFGAYLL---PR--NVITMSIAPKDVHENQIQFALE--RGAPAMVAAFATRRLPYPS------QAF 339 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~---~~--~V~gvDiSp~dl~~a~~~~A~~--rg~~~~~~~~d~e~LPfp~------~sF 339 (572)
.+..+|||||||+|.++..|+ .. +|+|+|+++.++..+....... ......+...|.+.+++++ ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 367899999999999999988 33 8999999999886665443332 1234456667888888877 899
Q ss_pred eEEEeccccccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 340 DLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 340 DlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
|+|+|..+++|+ +...++.++.|+|||||.|++.
T Consensus 115 D~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 115 DMITAVECAHWF--DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEE
Confidence 999999875555 8899999999999999999984
No 34
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.44 E-value=5.2e-13 Score=136.73 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=89.4
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP 333 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LP 333 (572)
.+.+.+.+.. ..+..+|||||||+|.++..|+++ +|+|+|+++.++..+.. .+...++. ..+...|.+.++
T Consensus 105 ~~~l~~~l~~---~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 105 AEFLMDHLGQ---AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNR-RARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp HHHHHTTSCC---CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHHhcc---CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCceEEEECChhcCC
Confidence 3445555542 246789999999999999888764 89999999988866654 33444543 456667888999
Q ss_pred CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++++||+|+|..+++|+ +...+|.++.|+|||||++++.+.
T Consensus 181 ~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYV--DLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp CCTTCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCEeEEEECCchhhC--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 999999999999887777 489999999999999999999864
No 35
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.43 E-value=6.2e-13 Score=127.62 Aligned_cols=97 Identities=22% Similarity=0.356 Sum_probs=77.7
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
+..+|||||||+|.++..|++. +|+++|+++.++..+.... +.. +...+...++ ++++||+|+|+.+++|+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~~~--~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----GRP--VRTMLFHQLD-AIDAYDAVWAHACLLHV 115 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TSC--CEECCGGGCC-CCSCEEEEEECSCGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----CCc--eEEeeeccCC-CCCcEEEEEecCchhhc
Confidence 4679999999999999999876 8999999998775444322 332 3344677787 78999999999887777
Q ss_pred cC-ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 352 TR-DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 352 ~~-d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.. +...+|+++.|+|||||+++++..
T Consensus 116 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 116 PRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 32 557999999999999999999964
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.43 E-value=3.5e-13 Score=135.70 Aligned_cols=102 Identities=20% Similarity=0.195 Sum_probs=82.5
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCC-CCCCCeeEEEecccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLP-YPSQAFDLIHCSRCR 348 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LP-fp~~sFDlI~ss~~l 348 (572)
+..+|||||||+|.++..|++. +|+|+|+++.++..+... +...+. ...+...|...++ +.+++||+|+|..++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQA-AEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 4579999999999999999876 899999999888665533 333343 2345556777777 788999999999886
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+|+ .++..+|.++.|+|||||++++...
T Consensus 147 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 147 EWV-ADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGC-SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hcc-cCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 666 8889999999999999999999964
No 37
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.43 E-value=4.1e-13 Score=129.18 Aligned_cols=101 Identities=17% Similarity=0.286 Sum_probs=79.5
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
.+..+|||||||+|.++..|++. +|+++|+++.++..+...... . ....+...|...++ ++++||+|+|+.+++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-~-~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR-W-SHISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT-C-SSEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc-C-CCeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 45679999999999999999887 899999999887554432211 1 13445566777777 6789999999988766
Q ss_pred ccCCh---HHHHHHHHHhccCCeEEEEEEC
Q 008262 351 WTRDD---GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 351 w~~d~---~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+ .++ ..+|.++.++|||||+++++++
T Consensus 127 ~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 127 L-EDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp S-SSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred C-CCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 6 665 4779999999999999999864
No 38
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.42 E-value=4.8e-13 Score=131.40 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=80.3
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
+..+|||||||+|.++..|++. +|+++|+++.++..+.............+...|...+++++++||+|+|..+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 5789999999999999988875 7999999998886554332221111233555677888888889999999988777
Q ss_pred ccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 351 WTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 351 w~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+ .+. ..+|.++.|+|||||+++++++
T Consensus 159 ~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 159 L-TDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp S-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 7 553 4899999999999999999864
No 39
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.42 E-value=5.8e-14 Score=149.53 Aligned_cols=114 Identities=10% Similarity=0.053 Sum_probs=88.9
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEE---Eecc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMV---AAFA 328 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~---~~~d 328 (572)
....+++.+.+.+. ..+..+|||||||+|.++..|++. +|+|+|+|+.++ +.|++++..... ...+
T Consensus 91 ~~~~~~~~l~~~~~----~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~-----~~a~~~~~~~~~~~~~~~~ 161 (416)
T 4e2x_A 91 HFAMLARDFLATEL----TGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVA-----AKAREKGIRVRTDFFEKAT 161 (416)
T ss_dssp HHHHHHHHHHHTTT----CSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHH-----HHHHTTTCCEECSCCSHHH
T ss_pred HHHHHHHHHHHHhC----CCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHH-----HHHHHcCCCcceeeechhh
Confidence 34455666665554 245689999999999999999877 899999998776 555555554322 1234
Q ss_pred ccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 329 TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 329 ~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+.+++++++||+|+|..+++|+ .++..+|++++|+|||||+|++.++
T Consensus 162 ~~~l~~~~~~fD~I~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 162 ADDVRRTEGPANVIYAANTLCHI-PYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp HHHHHHHHCCEEEEEEESCGGGC-TTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhhcccCCCCEEEEEECChHHhc-CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 55677778999999999998887 7899999999999999999999864
No 40
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.42 E-value=1.7e-13 Score=137.52 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=78.8
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHH-----------------HcCCCcEEEeccccCCCC
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFAL-----------------ERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~-----------------~rg~~~~~~~~d~e~LPf 334 (572)
+..+|||+|||+|..+..|+++ +|+|+|+|+.++..++.+... ..+....+...|+..+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 5679999999999999999877 799999999988655332210 011334566678888887
Q ss_pred CC-CCeeEEEeccccccccCC-hHHHHHHHHHhccCCeEEEEEE
Q 008262 335 PS-QAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 335 p~-~sFDlI~ss~~l~hw~~d-~~~~L~ei~RvLKPGG~lv~st 376 (572)
.+ ++||+|++..+++++..+ ...+++++.|+|||||+|++.+
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 64 899999998877776433 3579999999999999997654
No 41
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.42 E-value=9.7e-13 Score=124.12 Aligned_cols=101 Identities=16% Similarity=0.203 Sum_probs=80.3
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
+..+|||+|||+|.++..+++. +|+++|+++.++..+..... ..+. ...+...|...+++ +++||+|+|..+++|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKS-IENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHH-hCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 4579999999999999988876 89999999988866654333 3344 34455567788888 789999999988777
Q ss_pred ccC-ChHHHHHHHHHhccCCeEEEEEE
Q 008262 351 WTR-DDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 351 w~~-d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.. +...++.++.++|||||++++.+
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 632 55799999999999999988765
No 42
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.42 E-value=7.4e-13 Score=133.23 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=88.9
Q ss_pred ccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC--CcEEE
Q 008262 251 FIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVA 325 (572)
Q Consensus 251 f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~ 325 (572)
+...+...++.+.+.+. ..+..+|||||||+|.++..+++. +|+|+|+++.++..+... +...+. ...+.
T Consensus 45 l~~a~~~~~~~~~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~-~~~~~~~~~~~~~ 119 (287)
T 1kpg_A 45 LQEAQIAKIDLALGKLG----LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQL-VANSENLRSKRVL 119 (287)
T ss_dssp HHHHHHHHHHHHHTTTT----CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHTCCCCSCEEEE
T ss_pred HHHHHHHHHHHHHHHcC----CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHhcCCCCCeEEE
Confidence 33445556666666664 246689999999999999888743 899999999888655433 233333 23444
Q ss_pred eccccCCCCCCCCeeEEEecccccccc-CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 326 AFATRRLPYPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 326 ~~d~e~LPfp~~sFDlI~ss~~l~hw~-~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..|.+.+| ++||+|+|..+++|+. .+...+|.++.|+|||||.+++.++
T Consensus 120 ~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 120 LAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp ESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 55666665 7899999999888885 4668999999999999999999874
No 43
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.42 E-value=3.8e-13 Score=135.63 Aligned_cols=117 Identities=17% Similarity=0.248 Sum_probs=87.7
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcC----CCcEEEeccc
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG----APAMVAAFAT 329 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg----~~~~~~~~d~ 329 (572)
..+.+.+.+.+.. .+..+|||||||+|.++..|++. +|+|+|+|+.++..+..+...... ....+...+.
T Consensus 43 ~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 43 AEYKAWLLGLLRQ----HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHHHhcc----cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 4445555555542 34679999999999999999887 799999999988666543322111 1223445566
Q ss_pred cCCC---CCCCCeeEEEec-cccccccCC-------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 330 RRLP---YPSQAFDLIHCS-RCRINWTRD-------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~LP---fp~~sFDlI~ss-~~l~hw~~d-------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..++ +++++||+|+|. .+++|+ .+ ...+|++++|+|||||+|+++.+
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHL-PDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGS-CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhCccccccCCCeEEEEEcChHHhhc-CccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 6777 788999999998 676776 66 68999999999999999999964
No 44
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.42 E-value=6.1e-13 Score=132.19 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=83.7
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
...+.+.+.+... ..+..+|||||||+|.++..|++. +|+|+|+++.++. .++++.....+...|...+++
T Consensus 35 ~~~~~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~-----~a~~~~~~~~~~~~d~~~~~~ 107 (263)
T 3pfg_A 35 REAADLAALVRRH--SPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLA-----IARRRNPDAVLHHGDMRDFSL 107 (263)
T ss_dssp HHHHHHHHHHHHH--CTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHH-----HHHHHCTTSEEEECCTTTCCC
T ss_pred HHHHHHHHHHHhh--CCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHH-----HHHhhCCCCEEEECChHHCCc
Confidence 3344444444332 134589999999999999999887 7999999988774 444443344566667888887
Q ss_pred CCCCeeEEEecc-cccccc--CChHHHHHHHHHhccCCeEEEEEE
Q 008262 335 PSQAFDLIHCSR-CRINWT--RDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 335 p~~sFDlI~ss~-~l~hw~--~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+++||+|+|.. +++|+. .+...+|+++.++|||||+|++..
T Consensus 108 -~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 108 -GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp -SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred -cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 68999999987 666653 244689999999999999999974
No 45
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.41 E-value=4.8e-13 Score=129.11 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=85.8
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC------CcEEE
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA------PAMVA 325 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~------~~~~~ 325 (572)
....+.+.+.+.. .+..+|||||||+|.++..|++. +|+|+|+++.++..+..... ..+. ...+.
T Consensus 15 ~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~ 89 (217)
T 3jwh_A 15 QQRMNGVVAALKQ----SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD-RLRLPRNQWERLQLI 89 (217)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT-TCCCCHHHHTTEEEE
T ss_pred HHHHHHHHHHHHh----cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH-HhcCCcccCcceEEE
Confidence 4445556666552 35679999999999999998864 79999999988866553322 2222 24455
Q ss_pred eccccCCCCCCCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEEEEE
Q 008262 326 AFATRRLPYPSQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 326 ~~d~e~LPfp~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st 376 (572)
..|...++.++++||+|+|..+++|+ .+. ..+++++.|+|||||+++++.
T Consensus 90 ~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 90 QGALTYQDKRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ECCTTSCCGGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eCCcccccccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 55667777777899999999887777 544 699999999999999777764
No 46
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.41 E-value=6.1e-13 Score=126.93 Aligned_cols=103 Identities=15% Similarity=0.197 Sum_probs=80.1
Q ss_pred CCCEEEEECCCCchhH-HHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 274 HIRVVMDAGCGVASFG-AYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a-~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
+..+|||+|||+|.++ ..+... +|+++|+++.++..+..... ..+....+...|...+++++++||+|+|..+++|
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSR-ENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHH-HHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH-hcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 4579999999999874 444333 79999999998876654333 3334444556678888988899999999888777
Q ss_pred cc-CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 351 WT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 351 w~-~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+. .+...++.++.|+|||||+++++++
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 73 3457999999999999999999974
No 47
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.41 E-value=6.2e-13 Score=128.35 Aligned_cols=116 Identities=9% Similarity=0.109 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC------CcEE
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA------PAMV 324 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~------~~~~ 324 (572)
.....+.+.+.+.. .+..+|||||||+|.++..|++. +|+|+|+++.++..+...... .+. ...+
T Consensus 14 ~~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 14 NQQRLGTVVAVLKS----VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKI-DRLPEMQRKRISL 88 (219)
T ss_dssp HHHHHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTG-GGSCHHHHTTEEE
T ss_pred hHHHHHHHHHHHhh----cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHh-hccccccCcceEE
Confidence 34445555555542 35679999999999999999864 799999999888665543322 222 3345
Q ss_pred EeccccCCCCCCCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEEEEE
Q 008262 325 AAFATRRLPYPSQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 325 ~~~d~e~LPfp~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st 376 (572)
...|...+++++++||+|+|..+++|+ .++ ..+++++.++|||||+++.+.
T Consensus 89 ~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 89 FQSSLVYRDKRFSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EECCSSSCCGGGTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EeCcccccccccCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 556777778778899999999987777 544 689999999999999776653
No 48
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.41 E-value=5.3e-13 Score=127.78 Aligned_cols=109 Identities=12% Similarity=0.081 Sum_probs=83.7
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCCCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPYP 335 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LPfp 335 (572)
...+.+.+..+ .+..+|||||||+|.++..|++. +|+++|+++.++. .+++.+. ...+...|...+ ++
T Consensus 34 ~~~~~~~l~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~-----~a~~~~~~~~~~~~~d~~~~-~~ 104 (218)
T 3ou2_A 34 APAALERLRAG---NIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIA-----EAGRHGLDNVEFRQQDLFDW-TP 104 (218)
T ss_dssp HHHHHHHHTTT---TSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHH-----HHGGGCCTTEEEEECCTTSC-CC
T ss_pred HHHHHHHHhcC---CCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHH-----HHHhcCCCCeEEEecccccC-CC
Confidence 34445555432 34579999999999999888765 8999999988774 4444553 344555677777 77
Q ss_pred CCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 336 SQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 336 ~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++||+|+|+.+++|+ .+. ..+|+++.|+|||||.+++++.
T Consensus 105 ~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHV-PDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp SSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEEechhhcC-CHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 8999999999887777 554 7899999999999999999975
No 49
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.41 E-value=1e-12 Score=133.67 Aligned_cols=118 Identities=13% Similarity=0.108 Sum_probs=89.3
Q ss_pred ccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEE
Q 008262 251 FIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVA 325 (572)
Q Consensus 251 f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~ 325 (572)
+...+...++.+.+.+. ..+..+|||||||+|.++..+++. +|+|+|+++.++..++.. +...++. ..+.
T Consensus 53 l~~a~~~~~~~~~~~~~----~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~ 127 (302)
T 3hem_A 53 LEEAQYAKRKLALDKLN----LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAM-FDEVDSPRRKEVR 127 (302)
T ss_dssp HHHHHHHHHHHHHHTTC----CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHH-HHHSCCSSCEEEE
T ss_pred HHHHHHHHHHHHHHHcC----CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEE
Confidence 33445556666666664 346789999999999999888765 799999999888666543 3344543 3455
Q ss_pred eccccCCCCCCCCeeEEEeccccccccCCh---------HHHHHHHHHhccCCeEEEEEEC
Q 008262 326 AFATRRLPYPSQAFDLIHCSRCRINWTRDD---------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 326 ~~d~e~LPfp~~sFDlI~ss~~l~hw~~d~---------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..|...+ +++||+|+|..+++|+ .++ ..+|.++.|+|||||.+++.+.
T Consensus 128 ~~d~~~~---~~~fD~v~~~~~~~~~-~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 128 IQGWEEF---DEPVDRIVSLGAFEHF-ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp ECCGGGC---CCCCSEEEEESCGGGT-TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred ECCHHHc---CCCccEEEEcchHHhc-CccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 5566655 6899999999887777 443 6999999999999999999974
No 50
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.41 E-value=1.1e-12 Score=126.43 Aligned_cols=103 Identities=19% Similarity=0.311 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
+..+|||+|||+|.++..+++. +|+++|+++.++..+..... ..+....+...|...+++++++||+|+|+.+++++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAK-SRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-hcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 3679999999999999888876 89999999988866654333 33344456666788888888899999998773332
Q ss_pred -cCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 352 -TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 352 -~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..+...++.++.++|||||.+++..+
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 24557899999999999999999864
No 51
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.40 E-value=1.5e-12 Score=122.46 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=74.6
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCC-CCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP-YPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LP-fp~~sFDlI~ss~~l 348 (572)
.+..+|||+|||+|.++..|++. +|+|+|+++.++..++.... ..+.. ..+...+.+.++ +.+++||+|+++...
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~-~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLS-DLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 35689999999999999999876 89999999999876654433 34443 333444555543 457899999987322
Q ss_pred ccc--------cCChHHHHHHHHHhccCCeEEEEEECC
Q 008262 349 INW--------TRDDGILLLEVNRMLRAGGYFAWAAQP 378 (572)
Q Consensus 349 ~hw--------~~d~~~~L~ei~RvLKPGG~lv~st~P 378 (572)
++. ..+...++.++.|+|||||.+++...+
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 221 122247899999999999999998653
No 52
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.40 E-value=3.8e-13 Score=124.53 Aligned_cols=96 Identities=21% Similarity=0.298 Sum_probs=78.0
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
.+..+|||+|||+|.++..+++. +|+++|+++.++.. ++++.....+...+ +++++++||+|+|..+++|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~-----a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKE-----VKEKFDSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHH-----HHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHH-----HHHhCCCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 35678999999999999999887 89999999877643 33333333444444 7788899999999988777
Q ss_pred ccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 351 WTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 351 w~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+ .+...+++++.|+|||||++++.+.
T Consensus 88 ~-~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 88 M-DDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-cCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 7 7889999999999999999999964
No 53
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=2.6e-13 Score=134.18 Aligned_cols=113 Identities=13% Similarity=0.132 Sum_probs=81.0
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC-
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR- 331 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~- 331 (572)
..+.+.+++.+. .++.+|||||||+|..+..+++. +|+++|+++.++..++. .+...+....+...+.+.
T Consensus 47 ~~~m~~~a~~~~-----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~-~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHHhhc-----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHH-HHhhCCCceEEEeehHHhh
Confidence 345566666554 46789999999999999999876 79999999988855543 333344444444444433
Q ss_pred -CCCCCCCeeEEEec-----cccccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 332 -LPYPSQAFDLIHCS-----RCRINWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 332 -LPfp~~sFDlI~ss-----~~l~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
.++++++||.|+.. ....|+ .+...++.++.|+|||||.|++.
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~~~~-~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEETWHT-HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTT-HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccccccCCceEEEeeeecccchhhh-cchhhhhhhhhheeCCCCEEEEE
Confidence 35788999999853 222333 55679999999999999999875
No 54
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.39 E-value=1.3e-12 Score=127.25 Aligned_cols=119 Identities=20% Similarity=0.323 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL 332 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L 332 (572)
.....+.+.+.+... ..+..+|||||||+|.++..+++. +|+++|+++.++..+..... ..+....+...|...+
T Consensus 20 ~~~~~~~~~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 20 YKKWSDFIIEKCVEN--NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFR-SQGLKPRLACQDISNL 96 (246)
T ss_dssp HHHHHHHHHHHHHTT--TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEECCCGGGC
T ss_pred HHHHHHHHHHHHHHh--CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHh-hcCCCeEEEecccccC
Confidence 344555566665522 235689999999999999998876 79999999998876654433 3343455666678888
Q ss_pred CCCCCCeeEEEecc-cccccc--CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 333 PYPSQAFDLIHCSR-CRINWT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 333 Pfp~~sFDlI~ss~-~l~hw~--~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++ ++||+|+|.. +++|+. .+...+|.++.++|||||.++++.+
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred Ccc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 877 8999999997 766663 3457999999999999999999863
No 55
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.39 E-value=1.6e-12 Score=126.77 Aligned_cols=107 Identities=22% Similarity=0.322 Sum_probs=83.9
Q ss_pred HHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCC
Q 008262 261 QIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYP 335 (572)
Q Consensus 261 ~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp 335 (572)
.+.+.+. ..+..+|||||||+|.++..+++. +|+++|+++.++. .++++.. ...+...|...++++
T Consensus 34 ~l~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~~~~~~~d~~~~~~~ 104 (243)
T 3bkw_A 34 ALRAMLP----EVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLA-----RARAAGPDTGITYERADLDKLHLP 104 (243)
T ss_dssp HHHHHSC----CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHH-----HHHHTSCSSSEEEEECCGGGCCCC
T ss_pred HHHHhcc----ccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHH-----HHHHhcccCCceEEEcChhhccCC
Confidence 3444554 235689999999999999888765 7999999987774 3443322 234555677888888
Q ss_pred CCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 336 SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 336 ~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++||+|+|..+++|+ .+...+|.++.++|||||+++++++
T Consensus 105 ~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYV-EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp TTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCceEEEEecccccc-chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 8999999999886666 7889999999999999999999863
No 56
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.38 E-value=2.4e-12 Score=120.27 Aligned_cols=115 Identities=12% Similarity=0.066 Sum_probs=84.6
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC---cEEEeccccC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRR 331 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~---~~~~~~d~e~ 331 (572)
...+.+.+.+. ..+..+|||+|||+|.++..++.. +|+++|+++.++..+..... ..+.. ..+...|...
T Consensus 39 ~~~~~l~~~~~----~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVV----VDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIK-LNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCC----CCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHH-HTTCTTSCEEEEECSTTT
T ss_pred hHHHHHHHHcc----cCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHH-HcCCCccceEEEECchhc
Confidence 45566666665 236689999999999999888875 89999999988866654333 33444 3444445544
Q ss_pred CCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++++||+|+++..+++...+...++.++.++|||||.+++.+.
T Consensus 114 -~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 114 -NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp -TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 345679999999876443234557999999999999999999974
No 57
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.38 E-value=4.2e-13 Score=131.68 Aligned_cols=114 Identities=13% Similarity=0.134 Sum_probs=81.8
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL 332 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L 332 (572)
..+++.+.+.+. .+..+|||||||+|.++..|++. +|+++|+++.|+..++. .+...+....+...+.+.+
T Consensus 47 ~~~~~~l~~~~~-----~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHhhcC-----CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH-HHHhcCCCeEEEecCHHHh
Confidence 345555555443 35679999999999999999774 79999999998865553 2223333344555677777
Q ss_pred --CCCCCCeeEEEe-cccccccc----CChHHHHHHHHHhccCCeEEEEEE
Q 008262 333 --PYPSQAFDLIHC-SRCRINWT----RDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 333 --Pfp~~sFDlI~s-s~~l~hw~----~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
++++++||+|++ .... +.. .+...++.+++|+|||||+|++..
T Consensus 121 ~~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hcccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 888999999998 4332 221 122377999999999999999875
No 58
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.37 E-value=1.2e-12 Score=124.60 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=78.5
Q ss_pred EEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccccc-C
Q 008262 277 VVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT-R 353 (572)
Q Consensus 277 ~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~-~ 353 (572)
+|||||||+|.++..|++. +|+++|+++.++..+..... ..+....+...|...+++++++||+|+|+. .|+. .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQ-EKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHH-HHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHH-hcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHH
Confidence 9999999999999998876 89999999988866554333 334455566667788888889999999853 4542 3
Q ss_pred ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 354 DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 354 d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+...++.++.++|||||++++.++
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 457999999999999999999974
No 59
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.37 E-value=1.4e-12 Score=123.43 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=86.6
Q ss_pred ccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC-CcEEEecc
Q 008262 253 HGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-PAMVAAFA 328 (572)
Q Consensus 253 ~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d 328 (572)
...+...+.+.+.+.... ..+..+|||+|||+|.++..++.+ +|+++|+++.++..++.+.. ..+. ...+...|
T Consensus 24 p~~~~~~~~l~~~l~~~~-~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d 101 (189)
T 3p9n_A 24 PTTDRVRESLFNIVTARR-DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIE-ALGLSGATLRRGA 101 (189)
T ss_dssp --CHHHHHHHHHHHHHHS-CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHH-HHTCSCEEEEESC
T ss_pred cCcHHHHHHHHHHHHhcc-CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHH-HcCCCceEEEEcc
Confidence 344555666666654321 135689999999999999876655 69999999998876664443 3344 33455556
Q ss_pred ccCCC--CCCCCeeEEEeccccccccCChHHHHHHHHH--hccCCeEEEEEEC
Q 008262 329 TRRLP--YPSQAFDLIHCSRCRINWTRDDGILLLEVNR--MLRAGGYFAWAAQ 377 (572)
Q Consensus 329 ~e~LP--fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~R--vLKPGG~lv~st~ 377 (572)
...++ +++++||+|+++...++...+...++.++.+ +|||||.+++...
T Consensus 102 ~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 102 VAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred HHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 55543 4578999999987644433566899999999 9999999999864
No 60
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.37 E-value=1.8e-12 Score=131.74 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=85.7
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcC----CCcEEEecccc
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG----APAMVAAFATR 330 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg----~~~~~~~~d~e 330 (572)
.....+.+.+. ....+|||||||+|.++..|++. +|+|+|+++.++..+..... ..+ ....+...|..
T Consensus 70 ~~~~~~~~~~~-----~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 70 SEAREFATRTG-----PVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLA-EAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHC-----CCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHH-TSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHHhhC-----CCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHh-hcccccccceEEEeCchh
Confidence 34445555554 23348999999999999999887 89999999988866554332 222 23456667888
Q ss_pred CCCCCCCCeeEEEeccccccccCC--hHHHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRD--DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d--~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+++ +++||+|+|....+|+..+ ...+|+++.|+|||||+|+++++
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 8887 6899999987666666442 47999999999999999999964
No 61
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.37 E-value=3.7e-12 Score=123.40 Aligned_cols=93 Identities=23% Similarity=0.292 Sum_probs=77.8
Q ss_pred CCEEEEECCCCchhHHHhccCCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccccCC
Q 008262 275 IRVVMDAGCGVASFGAYLLPRNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWTRD 354 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~d 354 (572)
..+|||||||+|.++..++.. +++|+++.++ +.+++++ ..+...+.+.+++++++||+|+|..+++|+ .+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~-----~~a~~~~--~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSERMA-----EIARKRG--VFVLKGTAENLPLKDESFDFALMVTTICFV-DD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHHHH-----HHHHHTT--CEEEECBTTBCCSCTTCEEEEEEESCGGGS-SC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHHHH-----HHHHhcC--CEEEEcccccCCCCCCCeeEEEEcchHhhc-cC
Confidence 578999999999999999887 9999998876 3444443 334455778888888999999999886666 88
Q ss_pred hHHHHHHHHHhccCCeEEEEEEC
Q 008262 355 DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 355 ~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+..+|.++.++|||||.++++.+
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEe
Confidence 89999999999999999999975
No 62
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.36 E-value=4e-12 Score=122.22 Aligned_cols=101 Identities=19% Similarity=0.270 Sum_probs=79.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC--CCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR--LPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~--LPfp~~sFDlI~ss~~l 348 (572)
.+..+|||+|||+|.++..+++. +++++|+++.++ +.++++.. .+...|... +++++++||+|+|..++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~-----~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAA-----EQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVL 103 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHH-----HHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHH-----HHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChh
Confidence 35689999999999999988876 899999998766 44444332 244445554 67888999999999887
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEECCCCCC
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKH 382 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~t 382 (572)
+|+ .++..++.++.++|||||+++++++ ....
T Consensus 104 ~~~-~~~~~~l~~~~~~L~~gG~l~~~~~-~~~~ 135 (230)
T 3cc8_A 104 EHL-FDPWAVIEKVKPYIKQNGVILASIP-NVSH 135 (230)
T ss_dssp GGS-SCHHHHHHHTGGGEEEEEEEEEEEE-CTTS
T ss_pred hhc-CCHHHHHHHHHHHcCCCCEEEEEeC-Ccch
Confidence 776 7889999999999999999999974 4443
No 63
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.36 E-value=7.1e-13 Score=132.76 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=74.4
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHc----------------CC-------------
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALER----------------GA------------- 320 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~r----------------g~------------- 320 (572)
.++.+|||||||+|.++..++.. +|+|+|+|+.|+..++....... +.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 45678999999999887766544 69999999999976653221100 00
Q ss_pred Cc-EEEeccccC-CCC---CCCCeeEEEeccccccccCC---hHHHHHHHHHhccCCeEEEEEE
Q 008262 321 PA-MVAAFATRR-LPY---PSQAFDLIHCSRCRINWTRD---DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 321 ~~-~~~~~d~e~-LPf---p~~sFDlI~ss~~l~hw~~d---~~~~L~ei~RvLKPGG~lv~st 376 (572)
.. .+...|+.. .|+ ..++||+|+|+.+++|...+ ...+|.+++|+|||||+|++++
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 00 134445544 343 35799999999987776443 3589999999999999999996
No 64
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.35 E-value=2e-12 Score=123.29 Aligned_cols=102 Identities=23% Similarity=0.278 Sum_probs=78.8
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
+..+|||+|||+|.++..+++. +|+++|+++.++..++..... .....+...|...+++++++||+|++..++.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 4578999999999999888765 799999999887554432221 12334555677888888899999999877654
Q ss_pred cc--------------CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 351 WT--------------RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 351 w~--------------~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.. .+...+|.++.|+|||||.+++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 42 2446899999999999999999974
No 65
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.35 E-value=3.3e-12 Score=130.71 Aligned_cols=118 Identities=12% Similarity=0.083 Sum_probs=88.3
Q ss_pred cccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEe
Q 008262 252 IHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAA 326 (572)
Q Consensus 252 ~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~ 326 (572)
.......++.+.+.+. ..+..+|||||||+|.++..+++. +|+|+|+++.++..+... ....+.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~----~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~ 146 (318)
T 2fk8_A 72 EEAQYAKVDLNLDKLD----LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQV-LASIDTNRSRQVLL 146 (318)
T ss_dssp HHHHHHHHHHHHTTSC----CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHTSCCSSCEEEEE
T ss_pred HHHHHHHHHHHHHhcC----CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEEE
Confidence 3344556666666654 246689999999999999888754 899999999888655433 3333432 34445
Q ss_pred ccccCCCCCCCCeeEEEecccccccc-CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 327 FATRRLPYPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 327 ~d~e~LPfp~~sFDlI~ss~~l~hw~-~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.|.+.++ ++||+|+|..+++|+. .+...+|.++.|+|||||.+++.++
T Consensus 147 ~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 147 QGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp SCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 5666664 7899999998877775 4668999999999999999999974
No 66
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.34 E-value=2e-12 Score=124.10 Aligned_cols=96 Identities=24% Similarity=0.264 Sum_probs=74.4
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC---CCCC-CCeeEEEeccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL---PYPS-QAFDLIHCSRC 347 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L---Pfp~-~sFDlI~ss~~ 347 (572)
+..+|||||||+|.++..|++. +|+|+|+++.++ +.++++.. ..+...+...+ ++.. ++||+|+|+.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~-----~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLV-----DAARAAGA-GEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHH-----HHHHHTCS-SCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHH-----HHHHHhcc-cccchhhHHhhcccccccCCCccEEEECch
Confidence 4589999999999999999876 799999998776 44444432 22333344444 5444 45999999987
Q ss_pred cccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 348 RINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 348 l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++ ..+...+|+++.++|||||+++++++
T Consensus 126 l~--~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 126 LL--HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CC--SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hh--hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 55 58889999999999999999999974
No 67
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.33 E-value=1.8e-12 Score=133.26 Aligned_cols=103 Identities=8% Similarity=0.039 Sum_probs=73.0
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC-------cEEEeccc------cCC--CCC
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP-------AMVAAFAT------RRL--PYP 335 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~-------~~~~~~d~------e~L--Pfp 335 (572)
+..+|||||||+|..+..++.. +|+|+|+|+.|+..++.... +.+.. ..+...++ +.+ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~-~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYN-KLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHH-hccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4679999999999755444332 79999999999987765433 33321 12323333 323 466
Q ss_pred CCCeeEEEecccccccc--CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 336 SQAFDLIHCSRCRINWT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 336 ~~sFDlI~ss~~l~hw~--~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++||+|+|..++++.. .+...+|+++.|+|||||+|+++++
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 78999999988754322 3447999999999999999999974
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.33 E-value=7.4e-12 Score=121.94 Aligned_cols=115 Identities=17% Similarity=0.189 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP 333 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP 333 (572)
...+.+.+.+.++ +..+|||+|||+|.++..+++. +|+++|+++.++..+..... ..+....+...|...++
T Consensus 20 ~~~~~~~~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 20 YPEWVAWVLEQVE------PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAM-ETNRHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHHHHSC------TTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHH-HTTCCCEEEECCGGGCC
T ss_pred HHHHHHHHHHHcC------CCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhh-hcCCceEEEEcChhhcC
Confidence 3455566666654 3479999999999999998876 89999999998866654333 33444455566777788
Q ss_pred CCCCCeeEEEecc-cccccc--CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 334 YPSQAFDLIHCSR-CRINWT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 fp~~sFDlI~ss~-~l~hw~--~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++ ++||+|+|.. +++|+. .+...+|+++.++|||||.++++.+
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 76 8999999976 655552 2346899999999999999999864
No 69
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.33 E-value=4.7e-12 Score=123.67 Aligned_cols=102 Identities=12% Similarity=0.072 Sum_probs=77.9
Q ss_pred CCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcC-CCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG-APAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg-~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
..+|||||||+|.++..|++. +|+|+|+++.++..+......... ....+...|...++ ++++||+|+|..+++++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAI 145 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTS
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcC
Confidence 359999999999999999877 799999999888655433221101 12345556777766 45699999999887776
Q ss_pred cC-ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 352 TR-DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 352 ~~-d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.. +...++.++.++|||||+|++...
T Consensus 146 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 146 EPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp CGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 32 557999999999999999999875
No 70
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.33 E-value=2.2e-12 Score=125.82 Aligned_cols=88 Identities=22% Similarity=0.297 Sum_probs=72.1
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCCCCC-CCCeeEEEeccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRLPYP-SQAFDLIHCSRCRI 349 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~LPfp-~~sFDlI~ss~~l~ 349 (572)
+..+|||||||+|.++..|++. +|+++|+++.++.. ++++.....+...|. +.+|++ +++||+|+|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~---- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKL-----ARANAPHADVYEWNGKGELPAGLGAPFGLIVSR---- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHH-----HHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHH-----HHHhCCCceEEEcchhhccCCcCCCCEEEEEeC----
Confidence 4689999999999999999876 89999999987744 333333445555666 678888 8999999986
Q ss_pred cccCChHHHHHHHHHhccCCeEEE
Q 008262 350 NWTRDDGILLLEVNRMLRAGGYFA 373 (572)
Q Consensus 350 hw~~d~~~~L~ei~RvLKPGG~lv 373 (572)
.+...++.++.++|||||.++
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 ---RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---SCCSGGGGGHHHHEEEEEEEE
T ss_pred ---CCHHHHHHHHHHHcCCCcEEE
Confidence 466789999999999999998
No 71
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.33 E-value=3.1e-12 Score=124.32 Aligned_cols=99 Identities=11% Similarity=0.134 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecc-ccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSR-CRI 349 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~-~l~ 349 (572)
.+..+|||||||+|.++..|++. +|+++|+++.++..+ +++.....+...|...+++ +++||+|+|.. +++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a-----~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~ 112 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHA-----RKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVG 112 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHH-----HHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHH-----HHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHh
Confidence 35689999999999999988876 799999999877443 3333334455567777877 68999999765 544
Q ss_pred ccc--CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 350 NWT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 350 hw~--~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|.. .+...+|+++.++|||||.++++..
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 113 YLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp GCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 442 2346899999999999999999853
No 72
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.33 E-value=4.5e-12 Score=127.57 Aligned_cols=101 Identities=16% Similarity=0.189 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
+..+|||+|||+|.++..|++. +|+|+|+++.++..++.. +...+....+...|...+++ +++||+|+|+.+++|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNET-KEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 4578999999999999999876 899999999988666543 34445555566667788777 7899999999887766
Q ss_pred cCC-hHHHHHHHHHhccCCeEEEEEE
Q 008262 352 TRD-DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 352 ~~d-~~~~L~ei~RvLKPGG~lv~st 376 (572)
..+ ...++.++.++|||||++++..
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 322 3599999999999999988864
No 73
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.32 E-value=4.1e-12 Score=130.01 Aligned_cols=168 Identities=13% Similarity=0.134 Sum_probs=103.1
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHc------CC-CcEEEeccccCCC----CC--CC
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALER------GA-PAMVAAFATRRLP----YP--SQ 337 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~r------g~-~~~~~~~d~e~LP----fp--~~ 337 (572)
+..+|||||||+|.++..+++. +|+++|+++.++..+........ +. ...+...|.+.++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5679999999999999888754 79999999999876665444321 11 2345556777765 53 45
Q ss_pred CeeEEEecccccccc-CC---hHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccCcEEE
Q 008262 338 AFDLIHCSRCRINWT-RD---DGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAI 413 (572)
Q Consensus 338 sFDlI~ss~~l~hw~-~d---~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~i~i 413 (572)
+||+|+|+.+ +||. .+ ...+|.++.|+|||||+|+++++ . ..++.+.|...+... | .. ....+
T Consensus 114 ~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~-~---~~~l~~~~~~~~~~~----~---~~-~~~~~ 180 (313)
T 3bgv_A 114 CFDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTP-N---SFELIRRLEASETES----F---GN-EIYTV 180 (313)
T ss_dssp CEEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE-C---HHHHHHHHTTSSSSE----E---EC-SSEEE
T ss_pred CEEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC-C---hHHHHHHHHhhccCc----c---CC-eeEEE
Confidence 9999999876 6665 44 35999999999999999999974 2 234444332211100 0 00 00111
Q ss_pred eeccchhHHHHHHhcCCCC-CccCCCCCCccccCCCHHHHHhhc
Q 008262 414 WKKPTNNSCYLNREAGTIP-PLCDPDDNPDNVWYVDLKACITRL 456 (572)
Q Consensus 414 w~kpl~~~c~ll~~aGF~~-p~cd~~~~~~~~wY~~l~~~L~~L 456 (572)
......+....+.+.||.. +..+ .......|.++.++++++
T Consensus 181 ~f~~~~~~~~~~~~~~f~l~~~~~--~~~~~~~~~~~~~l~~~~ 222 (313)
T 3bgv_A 181 KFQKKGDYPLFGCKYDFNLEGVVD--VPEFLVYFPLLNEMAKKY 222 (313)
T ss_dssp EESCSSCCCSSCCEEEEEEC---C--CEEECCCHHHHHHHGGGG
T ss_pred EeCCCCCCCCccceEEEEECCccc--CcceEEcHHHHHHHHHHc
Confidence 1111111111223455544 3333 445668889999999988
No 74
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.32 E-value=9.5e-12 Score=122.41 Aligned_cols=102 Identities=20% Similarity=0.250 Sum_probs=79.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
.+..+|||+|||+|.++..|++. +|+|+|+++.++..++... ...+....+...|...++++ ++||+|+|....++
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKA-KERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-HhcCCceEEEECChhhcccC-CCccEEEEcCCchh
Confidence 35679999999999999988876 8999999999887665433 33455555666677778765 68999998654444
Q ss_pred ccC--ChHHHHHHHHHhccCCeEEEEEE
Q 008262 351 WTR--DDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 351 w~~--d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.. +...+|.++.++|||||.+++..
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 432 34689999999999999999875
No 75
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.32 E-value=5e-12 Score=120.89 Aligned_cols=118 Identities=15% Similarity=0.079 Sum_probs=81.0
Q ss_pred ccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC-cEEEe
Q 008262 251 FIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP-AMVAA 326 (572)
Q Consensus 251 f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~ 326 (572)
|..+.......+.+.+... ..+..+|||+|||+|.++..+++. +|+++|+++.++..++.. +...+.. ..+..
T Consensus 39 f~~~~~~~~~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~ 115 (205)
T 3grz_A 39 FGTGNHQTTQLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEEN-AALNGIYDIALQK 115 (205)
T ss_dssp ---CCHHHHHHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCCCEEEE
T ss_pred cCCCCCccHHHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEe
Confidence 3333334444444444422 135689999999999999888765 799999999888666543 3334444 34444
Q ss_pred ccccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 327 FATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 327 ~d~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.|.. .+.+++||+|+++....+ ...++.++.++|||||++++++.
T Consensus 116 ~d~~--~~~~~~fD~i~~~~~~~~----~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 116 TSLL--ADVDGKFDLIVANILAEI----LLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp SSTT--TTCCSCEEEEEEESCHHH----HHHHGGGSGGGEEEEEEEEEEEE
T ss_pred cccc--ccCCCCceEEEECCcHHH----HHHHHHHHHHhcCCCCEEEEEec
Confidence 4443 345689999999866443 37899999999999999999864
No 76
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.32 E-value=8.5e-12 Score=115.72 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=79.2
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccc-
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFAT- 329 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~- 329 (572)
+.....+.+.+. ..+..+|||+|||+|.++..+++. +|+++|+++.++..++. .+...+.. ..+...+.
T Consensus 11 ~~~~~~~~~~~~----~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~d~~ 85 (178)
T 3hm2_A 11 QHVRALAISALA----PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILS-NAINLGVSDRIAVQQGAP 85 (178)
T ss_dssp HHHHHHHHHHHC----CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHH-HHHTTTCTTSEEEECCTT
T ss_pred HHHHHHHHHHhc----ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH-HHHHhCCCCCEEEecchH
Confidence 344445555554 245679999999999999988765 79999999988865543 33334444 33333333
Q ss_pred cCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 330 RRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+.++..+++||+|++..++.+ ..++.++.++|||||.+++.+.
T Consensus 86 ~~~~~~~~~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 86 RAFDDVPDNPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp GGGGGCCSCCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred hhhhccCCCCCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEee
Confidence 444443489999999876444 6799999999999999999874
No 77
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.31 E-value=1.5e-11 Score=114.89 Aligned_cols=99 Identities=21% Similarity=0.211 Sum_probs=76.4
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEec-ccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCS-RCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss-~~l~h 350 (572)
+..+|||+|||+|.++..+++. +|+++|+++.++.. ++++.....+...+...+++++++||+|+++ .++++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~-----a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDY-----AKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHH-----HHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHH-----HHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 5679999999999999988876 79999999877643 3333333445556777788888999999998 45444
Q ss_pred cc-CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 351 WT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 351 w~-~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.. ++...++.++.++|||||.+++...
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 42 2236899999999999999999864
No 78
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.30 E-value=3.1e-12 Score=129.25 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=78.2
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc---CCeEEEeCCccchHHHHHHHHH----------------H
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP---RNVITMSIAPKDVHENQIQFAL----------------E 317 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~---~~V~gvDiSp~dl~~a~~~~A~----------------~ 317 (572)
..++.+.+.+... ..+..+|||||||+|.++..++. .+|+|+|+|+.|+..++..... .
T Consensus 56 ~~~~~l~~~l~~~--~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~ 133 (289)
T 2g72_A 56 WKLRCLAQTFATG--EVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLI 133 (289)
T ss_dssp HHHHHHHHHHHTS--CSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC--CCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHh
Confidence 3344555554311 13568999999999996544433 2799999999988655432110 0
Q ss_pred cCC--------------CcEEEeccccC-CCC-----CCCCeeEEEecccccccc---CChHHHHHHHHHhccCCeEEEE
Q 008262 318 RGA--------------PAMVAAFATRR-LPY-----PSQAFDLIHCSRCRINWT---RDDGILLLEVNRMLRAGGYFAW 374 (572)
Q Consensus 318 rg~--------------~~~~~~~d~e~-LPf-----p~~sFDlI~ss~~l~hw~---~d~~~~L~ei~RvLKPGG~lv~ 374 (572)
.+. ...+...|+.. +|+ ++++||+|+|+.++++.. .+...+|.++.|+|||||+|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 134 EGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp HCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 110 01233335555 654 456799999998866643 4567999999999999999999
Q ss_pred EE
Q 008262 375 AA 376 (572)
Q Consensus 375 st 376 (572)
+.
T Consensus 214 ~~ 215 (289)
T 2g72_A 214 IG 215 (289)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 79
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.30 E-value=5.4e-12 Score=134.00 Aligned_cols=122 Identities=17% Similarity=0.098 Sum_probs=89.6
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~ 331 (572)
+....++.+.+.+.. ...+..+|||+|||+|.++..+++. +|+++|+++.++..++.. +...+....+...|...
T Consensus 215 ~t~~ll~~l~~~l~~--~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n-~~~~~~~v~~~~~D~~~ 291 (381)
T 3dmg_A 215 ASLLLLEALQERLGP--EGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKG-LEANALKAQALHSDVDE 291 (381)
T ss_dssp HHHHHHHHHHHHHCT--TTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHH-HHHTTCCCEEEECSTTT
T ss_pred HHHHHHHHHHHhhcc--cCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCeEEEEcchhh
Confidence 344555555554421 1235679999999999999988876 899999999888666543 33445555566667777
Q ss_pred CCCCCCCeeEEEeccccccc----cCChHHHHHHHHHhccCCeEEEEEECC
Q 008262 332 LPYPSQAFDLIHCSRCRINW----TRDDGILLLEVNRMLRAGGYFAWAAQP 378 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~hw----~~d~~~~L~ei~RvLKPGG~lv~st~P 378 (572)
.+.++++||+|+|+..+++. ..+...++.++.++|||||.++++..+
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 77767899999998775541 233468999999999999999999753
No 80
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.29 E-value=9e-12 Score=127.12 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=79.9
Q ss_pred CCCCEEEEECCCCchhHHHhcc--C---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEec
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP--R---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~--~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss 345 (572)
.+..+|||||||+|.++..|+. . +|+++|+++.++..+... +...+.. ..+...|...++++ ++||+|+|+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRL-AAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHH-HTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHH-HHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 4568999999999999999852 2 799999999888655433 3333333 44566678888887 999999998
Q ss_pred cccccccCChH---HHHHHHHHhccCCeEEEEEEC
Q 008262 346 RCRINWTRDDG---ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~l~hw~~d~~---~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+++|+ .++. .++.++.|+|||||++++++.
T Consensus 195 ~~~~~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 195 GLNIYE-PDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp SSGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred Chhhhc-CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 887776 5654 379999999999999999863
No 81
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=117.78 Aligned_cols=86 Identities=22% Similarity=0.277 Sum_probs=72.7
Q ss_pred CCCEEEEECCCCchhHHHhccCCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccccC
Q 008262 274 HIRVVMDAGCGVASFGAYLLPRNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWTR 353 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~ 353 (572)
+..+|||||||+|.++..+. .+|+++|+++. . ..+...+.+.+++++++||+|+|..++ |+ .
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~-------------~--~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-NPVHCFDLASL-------------D--PRVTVCDMAQVPLEDESVDVAVFCLSL-MG-T 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-SCEEEEESSCS-------------S--TTEEESCTTSCSCCTTCEEEEEEESCC-CS-S
T ss_pred CCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC-------------C--ceEEEeccccCCCCCCCEeEEEEehhc-cc-c
Confidence 45789999999999998885 68999999985 1 224455778889988999999998875 55 7
Q ss_pred ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 354 DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 354 d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+...+|.++.++|||||++++++.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEc
Confidence 889999999999999999999864
No 82
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.28 E-value=1.1e-11 Score=123.50 Aligned_cols=100 Identities=18% Similarity=0.296 Sum_probs=77.5
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.+..+|||||||+|.++..+++. +|+++|+++.++ +.++++.....+...+.+.+++++++||+|++..+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~- 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAI-----KAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA- 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHH-----HHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHH-----HHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-
Confidence 35679999999999999888764 799999998876 44444544445666678889998899999998644
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHH
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQ 386 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL 386 (572)
...+.++.|+|||||.+++.++ ......++
T Consensus 158 -------~~~l~~~~~~L~pgG~l~~~~~-~~~~~~~~ 187 (269)
T 1p91_A 158 -------PCKAEELARVVKPGGWVITATP-GPRHLMEL 187 (269)
T ss_dssp -------CCCHHHHHHHEEEEEEEEEEEE-CTTTTHHH
T ss_pred -------hhhHHHHHHhcCCCcEEEEEEc-CHHHHHHH
Confidence 2358999999999999999974 44444443
No 83
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.28 E-value=3.1e-11 Score=118.87 Aligned_cols=105 Identities=10% Similarity=0.077 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCchhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCC---CCCeeEEEec
Q 008262 274 HIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYP---SQAFDLIHCS 345 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp---~~sFDlI~ss 345 (572)
+..+|||||||+|.++..|+. .+|+++|+++.++..++.. +...+.. ..+...+.+.+++. +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKL-SEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHH-HHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 467999999999998888773 2799999999988666543 3334543 44555566777654 6799999986
Q ss_pred cccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHH
Q 008262 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQ 386 (572)
Q Consensus 346 ~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL 386 (572)
.+ .+...++.++.++|||||+|++.. +....+++
T Consensus 149 ~~-----~~~~~~l~~~~~~LkpgG~l~~~~--g~~~~~~~ 182 (240)
T 1xdz_A 149 AV-----ARLSVLSELCLPLVKKNGLFVALK--AASAEEEL 182 (240)
T ss_dssp CC-----SCHHHHHHHHGGGEEEEEEEEEEE--CC-CHHHH
T ss_pred cc-----CCHHHHHHHHHHhcCCCCEEEEEe--CCCchHHH
Confidence 52 667899999999999999999875 33444443
No 84
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.27 E-value=1.2e-11 Score=123.32 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCcc------chHHHHHHHHHHcCC--C
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPK------DVHENQIQFALERGA--P 321 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~------dl~~a~~~~A~~rg~--~ 321 (572)
+......+.+.+. ..+..+|||||||+|.++..+++ .+|+|+|+++. ++..++... ...+. .
T Consensus 28 ~~~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~-~~~~~~~~ 102 (275)
T 3bkx_A 28 QTAHRLAIAEAWQ----VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHL-LAGPLGDR 102 (275)
T ss_dssp HHHHHHHHHHHHT----CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHH-HTSTTGGG
T ss_pred HHHHHHHHHHHcC----CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHH-HhcCCCCc
Confidence 4445555555554 24678999999999999888775 37999999987 776554333 33333 2
Q ss_pred cEEEecc---ccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 322 AMVAAFA---TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 322 ~~~~~~d---~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..+...| ...+|+++++||+|+|..+++|+ .++..+++.+.++++|||++++.+.
T Consensus 103 v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 103 LTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYF-ASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp EEEECSCCTTTCCGGGTTCCCSEEEEESCGGGS-SCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred eEEEECChhhhccCCCCCCCEEEEEEccchhhC-CCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 3344444 45667788999999999887776 7777777777777777999999864
No 85
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.27 E-value=3.9e-11 Score=114.73 Aligned_cols=111 Identities=13% Similarity=-0.018 Sum_probs=79.7
Q ss_pred HHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCC
Q 008262 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRL 332 (572)
Q Consensus 258 ~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~L 332 (572)
....+.+.+. ..+..+|||+|||+|.++..+++. +|+++|+++.++..++.... ..+.. ..+...|....
T Consensus 28 i~~~~l~~l~----~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 28 VRAVTLSKLR----LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLK-KFVARNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHHHHHTT----CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHH-HHTCTTEEEEECCTTTT
T ss_pred HHHHHHHHcC----CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HhCCCcEEEEeCChhhh
Confidence 3344555554 245689999999999998888764 69999999998866654433 33443 33444455333
Q ss_pred CCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 333 PYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
....++||+|++..... +...++.++.++|||||.+++.+.
T Consensus 103 ~~~~~~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CTTSCCCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhcCCCCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 32337899999876532 668999999999999999999864
No 86
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.27 E-value=9.9e-12 Score=125.58 Aligned_cols=109 Identities=11% Similarity=0.036 Sum_probs=78.3
Q ss_pred HHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC-
Q 008262 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY- 334 (572)
Q Consensus 258 ~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf- 334 (572)
.++.+.+.+. ..+..+|||||||+|.++..|+++ +|+++|+|+.|+..++.+.. .. ....+.+.++.
T Consensus 33 ~~~~il~~l~----l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~-----~~-~v~~~~~~~~~~ 102 (261)
T 3iv6_A 33 DRENDIFLEN----IVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALA-----DR-CVTIDLLDITAE 102 (261)
T ss_dssp HHHHHHHTTT----CCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTS-----SS-CCEEEECCTTSC
T ss_pred HHHHHHHhcC----CCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-----hc-cceeeeeecccc
Confidence 3455555554 246689999999999999999876 89999999998854442221 11 11122333332
Q ss_pred ----CCCCeeEEEeccccccccC-ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 335 ----PSQAFDLIHCSRCRINWTR-DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 335 ----p~~sFDlI~ss~~l~hw~~-d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+++||+|+|+.+++|+.. +...++.++.++| |||.++++..
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 2578999999988777743 3468999999999 9999999974
No 87
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.26 E-value=7.2e-12 Score=125.76 Aligned_cols=104 Identities=18% Similarity=0.202 Sum_probs=79.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCC-CCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPY-PSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPf-p~~sFDlI~ss~ 346 (572)
.+..+|||||||+|.++..++.. +|+|+|+++.++..+.... ...+. ...+...|...+++ ++++||+|+|..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRA-RNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 45689999999999988877653 7999999999886655333 22333 23455567788887 688999999998
Q ss_pred ccccc---cCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINW---TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw---~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++|. ..+...+|.++.|+|||||+++++++
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 76552 24457899999999999999999974
No 88
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.25 E-value=4e-12 Score=129.44 Aligned_cols=104 Identities=15% Similarity=0.205 Sum_probs=73.4
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcC------------------------------
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERG------------------------------ 319 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg------------------------------ 319 (572)
+..+|||||||+|.++..|+.. +|+|+|+++.++..+.........
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5689999999999999888764 899999999988665533211100
Q ss_pred ----------------------------CCcEEEeccccCC-----CCCCCCeeEEEecccccccc---C--ChHHHHHH
Q 008262 320 ----------------------------APAMVAAFATRRL-----PYPSQAFDLIHCSRCRINWT---R--DDGILLLE 361 (572)
Q Consensus 320 ----------------------------~~~~~~~~d~e~L-----Pfp~~sFDlI~ss~~l~hw~---~--d~~~~L~e 361 (572)
....+...|.... ++.+++||+|+|..++.+++ . +...+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 1123333444332 35678999999988753331 1 44689999
Q ss_pred HHHhccCCeEEEEEEC
Q 008262 362 VNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 362 i~RvLKPGG~lv~st~ 377 (572)
++++|||||+|++...
T Consensus 206 ~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHEEEEEEEEEECC
T ss_pred HHHHhCCCcEEEEecC
Confidence 9999999999999853
No 89
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.25 E-value=5.2e-11 Score=115.04 Aligned_cols=98 Identities=12% Similarity=-0.004 Sum_probs=73.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.+..+|||||||+|.++..++.. +|+++|+++.++..++. .+...+.. ..+...|..........||+|++....
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQK-NIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 45689999999999999888775 89999999998866553 34445554 345555555522223579999987532
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+.. ++.++.++|||||.+++++.
T Consensus 133 -----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 133 -----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp -----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred -----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 556 99999999999999999974
No 90
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.24 E-value=3e-11 Score=116.72 Aligned_cols=102 Identities=17% Similarity=0.244 Sum_probs=77.4
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCC--CCCCCeeEEEecc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP--YPSQAFDLIHCSR 346 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LP--fp~~sFDlI~ss~ 346 (572)
+..+|||||||+|.++..++.. +|+|+|+++.++..+.... ...++. ..+...|...++ +++++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKV-LEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHH-HHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 4578999999999998888754 7999999999886665433 334443 345556677776 7788999999875
Q ss_pred ccccccC--------ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINWTR--------DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw~~--------d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. .+|.. ....++.++.++|||||.+++.+.
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 S-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred C-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 4 44422 125799999999999999999873
No 91
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.23 E-value=1.1e-11 Score=121.35 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=76.8
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCc-EEEeccccC-CC--CCCCCeeEEEec
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRR-LP--YPSQAFDLIHCS 345 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~-~~~~~d~e~-LP--fp~~sFDlI~ss 345 (572)
...+|||||||+|.++..|+.. .|+|+|+++.++..+.. .+...++.+ .+...|+.. ++ +++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~-~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLA-SAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHH-HHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 5678999999999999888754 59999999998876653 444455543 444556555 34 678999999987
Q ss_pred cccccccCCh--------HHHHHHHHHhccCCeEEEEEEC
Q 008262 346 RCRINWTRDD--------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~l~hw~~d~--------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.. ..|.... ..++.++.|+|||||.|++++.
T Consensus 113 ~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 43 4553332 2599999999999999999974
No 92
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.23 E-value=1.1e-11 Score=121.74 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=75.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCC-----CCeeEEEec
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPS-----QAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~-----~sFDlI~ss 345 (572)
.+..+|||||||+|.++..|++. +|+++|+++.++..+.... ......+...|...+++.. ..||+|+|.
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEEc
Confidence 35678999999999999998876 8999999998875443222 1123345555666554321 249999999
Q ss_pred cccccccC--ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 346 RCRINWTR--DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~l~hw~~--d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+++|. . +...+|.++.++|||||++++..+
T Consensus 132 ~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 132 TGFHHI-PVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp SSSTTS-CGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred chhhcC-CHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 876665 5 557999999999999999988874
No 93
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.22 E-value=1.9e-11 Score=118.70 Aligned_cols=101 Identities=11% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCC--CCCCCeeEEEecc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP--YPSQAFDLIHCSR 346 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LP--fp~~sFDlI~ss~ 346 (572)
+..+|||||||+|.++..|+.. +|+|+|+++.++..+.. .+...+.. ..+...|+..++ +++++||.|++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~-~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQ-KVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHH-HHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 4578999999999999888754 79999999998866654 33444554 345555666665 7788999999764
Q ss_pred ccccccCC--------hHHHHHHHHHhccCCeEEEEEE
Q 008262 347 CRINWTRD--------DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 347 ~l~hw~~d--------~~~~L~ei~RvLKPGG~lv~st 376 (572)
. ..|... ...++.++.++|||||.|++.+
T Consensus 117 ~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 117 S-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred C-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 3 344321 2579999999999999999987
No 94
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.22 E-value=4.5e-11 Score=116.30 Aligned_cols=98 Identities=14% Similarity=0.108 Sum_probs=69.3
Q ss_pred CCCCEEEEECCCCchhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC----CCCCCCCeeEEEe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR----LPYPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~----LPfp~~sFDlI~s 344 (572)
.++.+|||+|||+|.++..|++ ..|+|+|+|+.|+... .+.++.+. ...+...|... .++. ++||+|+|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~-~~~a~~~~-~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKL-LELVRERN-NIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHH-HHHHHHCS-SEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHH-HHHHhcCC-CeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 4668999999999998887765 3799999999877433 34555442 23333345444 3454 79999998
Q ss_pred ccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+. ..+ .+...++.+++|+|||||+|+++.
T Consensus 133 ~~-~~~--~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DI-AQK--NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CC-CST--THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ec-cCh--hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 72 121 222356999999999999999985
No 95
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.22 E-value=3.8e-11 Score=113.85 Aligned_cols=104 Identities=14% Similarity=0.147 Sum_probs=76.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCC-CCCCCeeEEEe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLP-YPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LP-fp~~sFDlI~s 344 (572)
.+..+|||+|||+|.++..+++. +|+++|+++.++..++.. +...+. ...+...|.+.++ +.+++||+|++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKK-LTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-HHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 35679999999999988887764 799999999888666543 333444 2345555666665 66789999998
Q ss_pred ccccccc-----cC---ChHHHHHHHHHhccCCeEEEEEEC
Q 008262 345 SRCRINW-----TR---DDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 345 s~~l~hw-----~~---d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+...+.. .. +...++.++.++|||||++++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 7654221 11 224799999999999999999874
No 96
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.22 E-value=1.5e-11 Score=121.25 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=76.5
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC-----------------------------
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA----------------------------- 320 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~----------------------------- 320 (572)
.+..+|||||||+|.++..++.. +|+++|+++.++..+...... .+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKK-EPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTT-CTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhc-CCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 35678999999999999888765 799999999988665433211 110
Q ss_pred -Cc-EEEeccccCCC-CCC---CCeeEEEecccccccc---CChHHHHHHHHHhccCCeEEEEEEC
Q 008262 321 -PA-MVAAFATRRLP-YPS---QAFDLIHCSRCRINWT---RDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 321 -~~-~~~~~d~e~LP-fp~---~sFDlI~ss~~l~hw~---~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.. .+...|...++ +++ ++||+|+|..++++.. .+...+|.++.|+|||||+|++...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 02 34455665543 355 8999999998877443 3457999999999999999999873
No 97
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.21 E-value=3.9e-11 Score=109.75 Aligned_cols=103 Identities=13% Similarity=0.082 Sum_probs=75.4
Q ss_pred CCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC--------CCCCCe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP--------YPSQAF 339 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP--------fp~~sF 339 (572)
.+..+|||+|||+|.++..+++ .+++++|+++ ++.. ....+...|...++ +++++|
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 4567999999999998887764 3799999999 6521 22334455666665 677899
Q ss_pred eEEEeccccccccCCh-----------HHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 008262 340 DLIHCSRCRINWTRDD-----------GILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (572)
Q Consensus 340 DlI~ss~~l~hw~~d~-----------~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~ 388 (572)
|+|+++.. .++..+. ..++.++.++|||||.++++++ ......++.+
T Consensus 90 D~i~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~-~~~~~~~~~~ 147 (180)
T 1ej0_A 90 QVVMSDMA-PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF-QGEGFDEYLR 147 (180)
T ss_dssp EEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-SSTTHHHHHH
T ss_pred eEEEECCC-ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe-cCCcHHHHHH
Confidence 99999765 4444554 6899999999999999999874 3444444433
No 98
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.21 E-value=1.9e-11 Score=117.62 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=81.2
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC---CcEEEec
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA---PAMVAAF 327 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~---~~~~~~~ 327 (572)
..+.+.+.+.+.+... .+..+|||+|||+|.++..++.+ .|+++|+++.++..++.+. ...+. ...+...
T Consensus 36 ~~~~~~~~l~~~l~~~---~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~~~~v~~~~~ 111 (201)
T 2ift_A 36 TGDRVKETLFNWLMPY---IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNL-QTLKCSSEQAEVINQ 111 (201)
T ss_dssp --CHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHH-HHTTCCTTTEEEECS
T ss_pred CHHHHHHHHHHHHHHh---cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHH-HHhCCCccceEEEEC
Confidence 3445555555555421 13578999999999999875544 6999999999987665443 34454 3345555
Q ss_pred cccCC-C-CCCCC-eeEEEeccccccccCChHHHHHHH--HHhccCCeEEEEEEC
Q 008262 328 ATRRL-P-YPSQA-FDLIHCSRCRINWTRDDGILLLEV--NRMLRAGGYFAWAAQ 377 (572)
Q Consensus 328 d~e~L-P-fp~~s-FDlI~ss~~l~hw~~d~~~~L~ei--~RvLKPGG~lv~st~ 377 (572)
|...+ + +++++ ||+|++... .+. .+...++.++ .|+|||||.+++++.
T Consensus 112 d~~~~~~~~~~~~~fD~I~~~~~-~~~-~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 112 SSLDFLKQPQNQPHFDVVFLDPP-FHF-NLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp CHHHHTTSCCSSCCEEEEEECCC-SSS-CHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CHHHHHHhhccCCCCCEEEECCC-CCC-ccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 55443 3 23678 999999866 343 4557888888 678999999999874
No 99
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.20 E-value=5.2e-11 Score=114.06 Aligned_cols=109 Identities=11% Similarity=0.047 Sum_probs=80.3
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP 333 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LP 333 (572)
.....+.+.+. ..+..+|||||||+|.++..|++. +|+++|+++.++..+..... ..+.. ..+...|.....
T Consensus 64 ~~~~~~~~~l~----~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLE----LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLK-NLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcC----CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCceEEEECCcccCC
Confidence 34455555554 246789999999999999888765 89999999988866654333 33443 345555666655
Q ss_pred CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..+++||+|++..++.++ .+ ++.++|||||+++++..
T Consensus 139 ~~~~~~D~i~~~~~~~~~-~~------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEI-PT------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp GGGCCEEEEEESSBCSSC-CT------HHHHTEEEEEEEEEEEC
T ss_pred ccCCCccEEEEccchhhh-hH------HHHHhcccCcEEEEEEc
Confidence 567899999998776665 33 68999999999999964
No 100
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.20 E-value=3.4e-11 Score=112.49 Aligned_cols=129 Identities=14% Similarity=0.107 Sum_probs=87.5
Q ss_pred eeccCCCccccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHc
Q 008262 242 FKFPGGGTQFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALER 318 (572)
Q Consensus 242 ~~Fpggg~~f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~r 318 (572)
+.++.+. ......+.+.+.+.+.+... .+..+|||+|||+|.++..++.. +|+++|+++.++..++.... ..
T Consensus 16 ~~~~~~~-~~rp~~~~~~~~~~~~l~~~---~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~ 90 (187)
T 2fhp_A 16 LKALDGD-NTRPTTDKVKESIFNMIGPY---FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIA-IT 90 (187)
T ss_dssp CCCCCCC-SSCCCCHHHHHHHHHHHCSC---CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HH
T ss_pred ccCCCCC-CcCcCHHHHHHHHHHHHHhh---cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHH-Hh
Confidence 4444332 33445566777777776522 35679999999999998877654 79999999998876654433 33
Q ss_pred CCC--cEEEeccccC----CCCCCCCeeEEEeccccccccCChHHHHHHH--HHhccCCeEEEEEEC
Q 008262 319 GAP--AMVAAFATRR----LPYPSQAFDLIHCSRCRINWTRDDGILLLEV--NRMLRAGGYFAWAAQ 377 (572)
Q Consensus 319 g~~--~~~~~~d~e~----LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei--~RvLKPGG~lv~st~ 377 (572)
+.. ..+...|... +++.+++||+|+++.. .+. .+....+..+ .++|||||.+++...
T Consensus 91 ~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 91 KEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 432 3344445433 2233679999999866 332 4556777777 899999999999864
No 101
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.20 E-value=5.2e-11 Score=124.66 Aligned_cols=100 Identities=13% Similarity=0.148 Sum_probs=78.6
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEecccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
+..+|||||||+|.++..+++. +|+|+|+++ ++..+. +.+...+.. ..+...+.+.+++++++||+|+|..+.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 4689999999999999988876 799999995 775554 444555554 456667888999988999999986532
Q ss_pred --ccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 349 --INWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 349 --~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
++...+...++.++.|+|||||+++..
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 333356689999999999999998754
No 102
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.19 E-value=9.7e-11 Score=117.00 Aligned_cols=109 Identities=17% Similarity=0.005 Sum_probs=80.4
Q ss_pred CCCCEEEEECCCCchhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCC---CCCeeEEEe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYP---SQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp---~~sFDlI~s 344 (572)
.+..+|||||||+|..+..|+. .+|+++|+++.++..++. .+...++. ..+...+.+.++.. +++||+|+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVER-AIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 3568999999999988777664 279999999998866554 34444554 34555566766643 479999998
Q ss_pred ccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHH
Q 008262 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEH 389 (572)
Q Consensus 345 s~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~ 389 (572)
..+ .+...++.++.++|||||+|++.. +....+|+.+.
T Consensus 158 ~a~-----~~~~~ll~~~~~~LkpgG~l~~~~--g~~~~~e~~~~ 195 (249)
T 3g89_A 158 RAV-----APLCVLSELLLPFLEVGGAAVAMK--GPRVEEELAPL 195 (249)
T ss_dssp ESS-----CCHHHHHHHHGGGEEEEEEEEEEE--CSCCHHHHTTH
T ss_pred CCc-----CCHHHHHHHHHHHcCCCeEEEEEe--CCCcHHHHHHH
Confidence 643 456899999999999999998875 44555655443
No 103
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.19 E-value=8.2e-11 Score=122.78 Aligned_cols=111 Identities=16% Similarity=0.193 Sum_probs=81.5
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRR 331 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~ 331 (572)
.+.+.+.+.+. ..+..+|||||||+|.++..+++. +|+|+|+++ ++..++ +.+...+. ...+...+++.
T Consensus 51 ~~~~~i~~~~~----~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 51 SYRDFIYQNPH----IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAM-DIIRLNKLEDTITLIKGKIEE 124 (340)
T ss_dssp HHHHHHHHCGG----GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhhhh----hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHH-HHHHHcCCCCcEEEEEeeHHH
Confidence 44555555544 245679999999999999888765 799999997 775554 33444444 33455667888
Q ss_pred CCCCCCCeeEEEecccc--ccccCChHHHHHHHHHhccCCeEEE
Q 008262 332 LPYPSQAFDLIHCSRCR--INWTRDDGILLLEVNRMLRAGGYFA 373 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l--~hw~~d~~~~L~ei~RvLKPGG~lv 373 (572)
+++++++||+|+|..+. ++...+...++.++.|+|||||.++
T Consensus 125 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 125 VHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 88888899999987532 2222445689999999999999998
No 104
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.18 E-value=1e-10 Score=108.26 Aligned_cols=109 Identities=8% Similarity=0.060 Sum_probs=80.7
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCC
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRL 332 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~L 332 (572)
....+.+.+.+. ..+..+|||+|||+|.++..++.. +|+++|+++.++..+.... ...+.. ..+...|...
T Consensus 21 ~~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 21 EEIRAVSIGKLN----LNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNL-AKFNIKNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHHHC----CCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHH-HHTTCCSEEEEESCHHH-
T ss_pred HHHHHHHHHHcC----CCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH-HHcCCCcEEEEECCccc-
Confidence 445555655554 245679999999999999888765 7999999998886655433 334443 3344445544
Q ss_pred CCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 333 PYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++++||+|++..+ .+...++.++.++ |||.+++.+.
T Consensus 95 ~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 566689999999866 5668999999999 9999999974
No 105
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.18 E-value=3e-11 Score=111.06 Aligned_cols=120 Identities=15% Similarity=0.128 Sum_probs=82.2
Q ss_pred cccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc
Q 008262 252 IHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (572)
Q Consensus 252 ~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~ 329 (572)
....+.+.+.+.+.+... ..+..+|||+|||+|.++..++.. .|+++|+++.++..+...... .+....+...|.
T Consensus 21 ~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~d~ 97 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRLR--YPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRR-TGLGARVVALPV 97 (171)
T ss_dssp CCCCHHHHHHHHHHHHHH--CTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHH-HTCCCEEECSCH
T ss_pred CCCHHHHHHHHHHHHHhh--ccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHH-cCCceEEEeccH
Confidence 334455566666655421 114578999999999999888876 699999999988766544433 333444555554
Q ss_pred cC-CC-C--CCCCeeEEEeccccccccCChHHHHHHHH--HhccCCeEEEEEEC
Q 008262 330 RR-LP-Y--PSQAFDLIHCSRCRINWTRDDGILLLEVN--RMLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~-LP-f--p~~sFDlI~ss~~l~hw~~d~~~~L~ei~--RvLKPGG~lv~st~ 377 (572)
.. ++ + ..++||+|+++..++ .+...++..+. ++|||||.+++++.
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred HHHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 43 22 1 134899999986533 45567777777 99999999999975
No 106
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.18 E-value=1.1e-10 Score=133.05 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=90.3
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHH-----cCCC-c
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALE-----RGAP-A 322 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~-----rg~~-~ 322 (572)
.....++.+.+.+.. .+..+|||||||+|.++..|++. +|+|+|+++.|+..++.+.... .+.. .
T Consensus 705 L~eqRle~LLelL~~----~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nV 780 (950)
T 3htx_A 705 LSKQRVEYALKHIRE----SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSA 780 (950)
T ss_dssp HHHHHHHHHHHHHHH----SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEE
T ss_pred HHHHHHHHHHHHhcc----cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCce
Confidence 345556666666652 35689999999999999999865 5999999999987765443322 1332 3
Q ss_pred EEEeccccCCCCCCCCeeEEEeccccccccCChH--HHHHHHHHhccCCeEEEEEEC
Q 008262 323 MVAAFATRRLPYPSQAFDLIHCSRCRINWTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 323 ~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~d~~--~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+...|...+++.+++||+|+|..+++|+ .+.. .++.++.|+|||| .++++++
T Consensus 781 efiqGDa~dLp~~d~sFDlVV~~eVLeHL-~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 781 TLYDGSILEFDSRLHDVDIGTCLEVIEHM-EEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEEESCTTSCCTTSCSCCEEEEESCGGGS-CHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EEEECchHhCCcccCCeeEEEEeCchhhC-ChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 45667888999999999999999887777 4443 6899999999999 8888874
No 107
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.18 E-value=1e-10 Score=120.18 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=74.0
Q ss_pred CCCCEEEEECCCCchhHHHh-c---cCCeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCCCCCeeEEEeccc
Q 008262 273 HHIRVVMDAGCGVASFGAYL-L---PRNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L-~---~~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
.++.+|||||||+|.++..+ + ..+|+|+|+++.++..++...+ ..+.. ..+...|...++ +++||+|++...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~-~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~ 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIE-GLGVDGVNVITGDETVID--GLEFDVLMVAAL 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHH-HHTCCSEEEEESCGGGGG--GCCCSEEEECTT
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH-hcCCCCeEEEECchhhCC--CCCcCEEEECCC
Confidence 57799999999999765433 2 3389999999999977765443 33443 345555666665 789999997543
Q ss_pred cccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 348 RINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 348 l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
..+...++.++.|+|||||.|++..
T Consensus 198 ----~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 198 ----AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ----CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ----ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 3777899999999999999999986
No 108
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.18 E-value=6.2e-11 Score=114.06 Aligned_cols=118 Identities=9% Similarity=0.020 Sum_probs=82.8
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-PAMVAAFAT 329 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~ 329 (572)
..+...+.+.+.+... .+..+|||+|||+|.++..++.+ +|+++|+++.++..++.+ +...+. ...+...|.
T Consensus 37 ~~~~~~~~l~~~l~~~---~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~-~~~~~~~~v~~~~~D~ 112 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPV---IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKN-LATLKAGNARVVNSNA 112 (202)
T ss_dssp -CHHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-HHHTTCCSEEEECSCH
T ss_pred CHHHHHHHHHHHHHhh---cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEECCH
Confidence 3445556666655421 14578999999999999875544 799999999998766543 334444 334555565
Q ss_pred cC-CCCCCCCeeEEEeccccccccCChHHHHHHHHH--hccCCeEEEEEEC
Q 008262 330 RR-LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNR--MLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~-LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~R--vLKPGG~lv~st~ 377 (572)
.. ++..+++||+|++... .+. .+...++.++.+ +|||||.+++++.
T Consensus 113 ~~~~~~~~~~fD~V~~~~p-~~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 113 MSFLAQKGTPHNIVFVDPP-FRR-GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHHHSSCCCCEEEEEECCS-SST-TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHhhcCCCCCEEEECCC-CCC-CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 44 5666789999998765 343 556788888866 5999999999864
No 109
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.17 E-value=1.2e-10 Score=119.31 Aligned_cols=97 Identities=13% Similarity=0.207 Sum_probs=69.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEE-eccccCCC---CCCCCeeEEEec
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVA-AFATRRLP---YPSQAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~-~~d~e~LP---fp~~sFDlI~ss 345 (572)
.+..+|||||||||.++..|++. +|+|+|+++.|+..+ .......... ..++..++ ++..+||+|+|.
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a-----~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWK-----LRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHH-----HHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHhCcccceecccCceecchhhCCCCCCCEEEEE
Confidence 35679999999999999888765 799999999998542 2222222111 11223332 344569999987
Q ss_pred cccccccCChHHHHHHHHHhccCCeEEEEEECC
Q 008262 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAAQP 378 (572)
Q Consensus 346 ~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P 378 (572)
.++++ ...+|.++.|+|||||.|++...|
T Consensus 159 ~sf~s----l~~vL~e~~rvLkpGG~lv~lvkP 187 (291)
T 3hp7_A 159 VSFIS----LNLILPALAKILVDGGQVVALVKP 187 (291)
T ss_dssp CSSSC----GGGTHHHHHHHSCTTCEEEEEECG
T ss_pred eeHhh----HHHHHHHHHHHcCcCCEEEEEECc
Confidence 66443 488999999999999999998543
No 110
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.17 E-value=4.9e-11 Score=118.14 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=74.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHH-----HcCCC-cEEEeccccC-CC--CCCCCe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFAL-----ERGAP-AMVAAFATRR-LP--YPSQAF 339 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~-----~rg~~-~~~~~~d~e~-LP--fp~~sF 339 (572)
.+..+|||||||+|.++..|+.. .|+|+|+++.++..++..... ..+.. ..+...|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34578999999999999998865 699999999998766543322 12333 3445556665 66 788999
Q ss_pred eEEEeccccccccCC--------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 340 DLIHCSRCRINWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 340 DlI~ss~~l~hw~~d--------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|.|++... ..|... ...+|.++.|+|||||.|++.+.
T Consensus 125 D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 99987543 334221 14799999999999999999873
No 111
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.17 E-value=1e-10 Score=123.59 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=82.8
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR 331 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~ 331 (572)
.+.+.|.+.+. ..+..+|||||||+|.++..++++ +|+|+|++ .++..+. +.+...+.. ..+...+++.
T Consensus 50 ~~~~~i~~~~~----~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~ 123 (376)
T 3r0q_C 50 AYFNAVFQNKH----HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVED 123 (376)
T ss_dssp HHHHHHHTTTT----TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHHHHhccc----cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhh
Confidence 44445544433 245689999999999999988876 79999999 7886554 444555554 4566667888
Q ss_pred CCCCCCCeeEEEecccccccc--CChHHHHHHHHHhccCCeEEEEE
Q 008262 332 LPYPSQAFDLIHCSRCRINWT--RDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~hw~--~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
++++ ++||+|+|..+..... .+...++.+++|+|||||+++++
T Consensus 124 ~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 124 ISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred cCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 8877 8999999965323322 34578999999999999999875
No 112
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.17 E-value=9.3e-11 Score=123.03 Aligned_cols=101 Identities=12% Similarity=0.171 Sum_probs=75.9
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCC--CCCCCCeeEEEec
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRL--PYPSQAFDLIHCS 345 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~L--Pfp~~sFDlI~ss 345 (572)
...+|||||||+|.++..++++ +++++|+ +.++..+.. .+.+.+. ...+...|.... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRK-QTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHH-HHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHH-HHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 4589999999999999988763 7999998 777755443 2223333 234555566554 566 789999999
Q ss_pred cccccccCCh-HHHHHHHHHhccCCeEEEEEEC
Q 008262 346 RCRINWTRDD-GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~l~hw~~d~-~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.++++|..+. ..+|++++|+|||||++++.+.
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 9988884332 4889999999999999999874
No 113
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.17 E-value=1.1e-10 Score=108.75 Aligned_cols=112 Identities=15% Similarity=0.181 Sum_probs=79.3
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccC
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRR 331 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~ 331 (572)
......+.+.+. ..+..+|||+|||+|.++..++.. +|+++|+++.++..+..... ..+. ...+...+...
T Consensus 19 ~~~~~~~~~~~~----~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 19 MEVRCLIMCLAE----PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQ-RHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHHHHC----CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HTTCCTTEEEEESCHHH
T ss_pred HHHHHHHHHhcC----CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHH-HcCCCcceEEEecCHHH
Confidence 344444555544 245689999999999999888876 79999999988866554333 3344 23344444433
Q ss_pred CCCCC-CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 332 LPYPS-QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 332 LPfp~-~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++ ++||+|++..++. +...++.++.++|+|||.+++...
T Consensus 94 -~~~~~~~~D~v~~~~~~~----~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGG----ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp -HHTTSCCEEEEEESCCTT----CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -hcccCCCCCEEEECCchH----HHHHHHHHHHHhcCCCcEEEEEec
Confidence 2232 5899999876543 458999999999999999999864
No 114
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.16 E-value=1.3e-10 Score=108.79 Aligned_cols=102 Identities=10% Similarity=0.096 Sum_probs=74.7
Q ss_pred CCCEEEEECCCCchhHHHhccC-CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~ 352 (572)
+..+|||+|||+|.++..|+++ +|+|+|+++.++.. .....+...|... ++++++||+|+|+..+++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~- 91 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPD- 91 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTT-
T ss_pred CCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCCCccC-
Confidence 4569999999999999999887 89999999987733 1223344455555 6667899999998764433
Q ss_pred CCh---------HHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 008262 353 RDD---------GILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (572)
Q Consensus 353 ~d~---------~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~ 388 (572)
.+. ..++.++.+.| |||.+++... ......++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~-~~~~~~~l~~ 134 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI-EANRPKEVLA 134 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE-GGGCHHHHHH
T ss_pred CccccccCCcchHHHHHHHHhhC-CCCEEEEEEe-cCCCHHHHHH
Confidence 332 57899999999 9999999863 3344444433
No 115
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.16 E-value=5.4e-11 Score=114.76 Aligned_cols=102 Identities=19% Similarity=0.166 Sum_probs=75.4
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHH----HcCCC-cEEEeccccCCCCCCCCeeEEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFAL----ERGAP-AMVAAFATRRLPYPSQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~----~rg~~-~~~~~~d~e~LPfp~~sFDlI~ 343 (572)
.+..+|||||||+|.++..|++. +|+|+|+++.|+..... .++ ..+.. ..+...|.+.+|+++++ |.|+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~-~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISA-KAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHH-HHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 35678999999999999888765 79999999999864322 222 23443 34556688889988777 8777
Q ss_pred ecccc--c--cccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCR--I--NWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l--~--hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
..... . |+..++..+|.++.|+|||||.++++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 43211 1 244666899999999999999999974
No 116
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.15 E-value=1.1e-10 Score=113.47 Aligned_cols=103 Identities=15% Similarity=0.037 Sum_probs=75.1
Q ss_pred CCCCEEEEECCC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC-CCCCCCCeeEEEeccc
Q 008262 273 HHIRVVMDAGCG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR-LPYPSQAFDLIHCSRC 347 (572)
Q Consensus 273 ~~~~~VLDIGCG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~-LPfp~~sFDlI~ss~~ 347 (572)
.+..+|||+||| +|.++..++.. +|+++|+++.++..++.. +...+....+...|... .++++++||+|+|+..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRN-IERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHH-HHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHH-HHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 356899999999 99998887754 799999999988666543 33445445555555433 3466789999999865
Q ss_pred cccccC------------------ChHHHHHHHHHhccCCeEEEEEE
Q 008262 348 RINWTR------------------DDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 348 l~hw~~------------------d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.++... ....++.++.++|||||++++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 433211 12678999999999999999975
No 117
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.15 E-value=1.3e-10 Score=117.60 Aligned_cols=116 Identities=14% Similarity=0.112 Sum_probs=78.8
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCC---chhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGV---ASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGt---G~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~ 329 (572)
.+++++.+.+.. .....+|||||||+ |.++..+.. .+|+++|+|+.|+..++.... ......+...|.
T Consensus 63 ~~~~~~~~~l~~---~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~ 137 (274)
T 2qe6_A 63 KVLVRGVRFLAG---EAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADV 137 (274)
T ss_dssp HHHHHHHHHHHT---TTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCT
T ss_pred HHHHHHHHHHhh---ccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeC
Confidence 344444444431 12457999999999 987765543 389999999999866554331 112234445555
Q ss_pred cCCC-----------CCCCCeeEEEeccccccccCC-hHHHHHHHHHhccCCeEEEEEEC
Q 008262 330 RRLP-----------YPSQAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~LP-----------fp~~sFDlI~ss~~l~hw~~d-~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
...+ ++..+||+|++..+++|+.++ ...+|+++.++|||||+|+++..
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 138 RDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 4311 223489999998876666332 67999999999999999999975
No 118
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.14 E-value=2.9e-11 Score=118.95 Aligned_cols=104 Identities=16% Similarity=0.113 Sum_probs=69.5
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCC-ccchHHHH--HHHHHHcCCC-cEEEeccccCCCCC-CCCeeEEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIA-PKDVHENQ--IQFALERGAP-AMVAAFATRRLPYP-SQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS-p~dl~~a~--~~~A~~rg~~-~~~~~~d~e~LPfp-~~sFDlI~ 343 (572)
.+..+|||||||+|.++..|+.+ .|+|+|+| +.|+..+. .+.+...+.. ..+...+.+.+|.. .+.+|.|+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 35678999999999999998843 69999999 66654331 1122233444 34555677777632 25566666
Q ss_pred ecccc----ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCR----INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l----~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
++... .++..+...+|.+++|+|||||.|++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 54321 1222344678999999999999999954
No 119
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.14 E-value=4.5e-11 Score=118.87 Aligned_cols=112 Identities=12% Similarity=0.111 Sum_probs=78.2
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc---cc
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFA---TR 330 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d---~e 330 (572)
+..|..-+..+ ..+++.+|||+|||+|.++..|++. .|+++|+++.|+..+. +.+.+++ .......+ .+
T Consensus 63 aa~i~~gl~~l-~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~~~-ni~~V~~d~~~p~ 139 (233)
T 4df3_A 63 AAALLKGLIEL-PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRDRR-NIFPILGDARFPE 139 (233)
T ss_dssp HHHHHTTCSCC-CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTTCT-TEEEEESCTTCGG
T ss_pred HHHHHhchhhc-CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHhhc-CeeEEEEeccCcc
Confidence 33444444432 2468899999999999999999864 6999999999986554 2333332 12222222 34
Q ss_pred CCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
..++..+++|+|++.. ....+...++.++.|+|||||+++++.
T Consensus 140 ~~~~~~~~vDvVf~d~---~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 140 KYRHLVEGVDGLYADV---AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp GGTTTCCCEEEEEECC---CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccceEEEEEEec---cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 4567778999999752 232456789999999999999999984
No 120
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.14 E-value=1.3e-10 Score=110.83 Aligned_cols=102 Identities=14% Similarity=0.019 Sum_probs=75.5
Q ss_pred CCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 275 IRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
..+|||+|||+|.++..++.. +|+++|+++.++..+.. .+...+.. ..+...+...++ +.++||+|+|...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQ-VQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 579999999999988887743 79999999988865553 33334443 344455666655 4578999997542
Q ss_pred cccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHH
Q 008262 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEA 385 (572)
Q Consensus 350 hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~E 385 (572)
.+...++.++.++|||||++++.. +....++
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~--~~~~~~~ 172 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALK--GQMPEDE 172 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEE--SSCCHHH
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEe--CCCchHH
Confidence 556899999999999999999986 3344443
No 121
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.14 E-value=1e-10 Score=116.88 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=72.8
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
+..+|||+|||+|.++..+++. +|+++|+++.++..+..+ +...+....+...+... ++++++||+|+++....+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n-~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~- 196 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEAN-AKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL- 196 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHH-HHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH-
T ss_pred CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHHH-
Confidence 4689999999999998888765 799999999988666543 33444433343334333 144678999998754322
Q ss_pred cCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 352 TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 352 ~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
...++.++.++|||||+++++..
T Consensus 197 ---~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 197 ---HAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEee
Confidence 36899999999999999999863
No 122
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.14 E-value=3e-10 Score=113.20 Aligned_cols=112 Identities=11% Similarity=0.135 Sum_probs=79.6
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCC--CCCCCeeEEEecc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP--YPSQAFDLIHCSR 346 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LP--fp~~sFDlI~ss~ 346 (572)
+..+|||+|||+|.++..++.+ +|+|+|+++.++..++.... ..++. ..+...|...++ +++++||+|+|+.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~-~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVA-YNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHH-HTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHH-HCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 5689999999999999998876 79999999988866654433 34443 345555666654 5578999999975
Q ss_pred ccccc----c---------------CChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 008262 347 CRINW----T---------------RDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (572)
Q Consensus 347 ~l~hw----~---------------~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~ 388 (572)
..... . .+...++.++.++|||||.|++... .....++..
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~ 186 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR--PERLLDIID 186 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC--TTTHHHHHH
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc--HHHHHHHHH
Confidence 43222 0 1224799999999999999999853 344444433
No 123
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.13 E-value=3.7e-10 Score=118.72 Aligned_cols=100 Identities=16% Similarity=0.181 Sum_probs=76.4
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss~ 346 (572)
.+..+|||||||+|.++..++++ +++++|+ +.++..+..... +.++ ...+...|.. .+++. .||+|++..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLT-GRGLADRCEILPGDFF-ETIPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTT-TCCCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhh-hcCcCCceEEeccCCC-CCCCC-CceEEEhhh
Confidence 45689999999999999888764 7899999 877765554333 3333 2345555554 45665 899999999
Q ss_pred ccccccCChH--HHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINWTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw~~d~~--~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++| ++.. .+|++++++|||||+|++.+.
T Consensus 277 vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 277 VLHDW-DDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp CGGGS-CHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred hhccC-CHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 98888 5543 799999999999999999864
No 124
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.12 E-value=4.2e-11 Score=111.62 Aligned_cols=117 Identities=13% Similarity=0.059 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccc
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT 329 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~ 329 (572)
.+...+.+.+.+... .+..+|||+|||+|.++..++.. +|+++|+++.++..++. .+...+.. ..+...|.
T Consensus 15 ~~~~~~~~~~~l~~~---~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~~d~ 90 (177)
T 2esr_A 15 SDKVRGAIFNMIGPY---FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQD-NIIMTKAENRFTLLKMEA 90 (177)
T ss_dssp ---CHHHHHHHHCSC---CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHHTTTCGGGEEEECSCH
T ss_pred HHHHHHHHHHHHHhh---cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECcH
Confidence 344455565555421 35679999999999999888765 79999999988866553 33334442 33444454
Q ss_pred cC-CCCCCCCeeEEEeccccccccCChHHHHHHHH--HhccCCeEEEEEEC
Q 008262 330 RR-LPYPSQAFDLIHCSRCRINWTRDDGILLLEVN--RMLRAGGYFAWAAQ 377 (572)
Q Consensus 330 e~-LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~--RvLKPGG~lv~st~ 377 (572)
.. ++..+++||+|+++... +. ......+..+. ++|||||.+++.+.
T Consensus 91 ~~~~~~~~~~fD~i~~~~~~-~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 91 ERAIDCLTGRFDLVFLDPPY-AK-ETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHHHHHBCSCEEEEEECCSS-HH-HHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHhHHhhcCCCCEEEECCCC-Cc-chHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 44 34445679999987553 22 33456777776 99999999999974
No 125
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.12 E-value=2.2e-11 Score=115.79 Aligned_cols=125 Identities=10% Similarity=0.021 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecccc
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e 330 (572)
.+.+++.+.+.+.. ..+..+|||+|||+|.++..+++. +|+++|+++.++..++.... ..+....+...|..
T Consensus 14 ~~~~~~~~~~~l~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~d~~ 89 (215)
T 4dzr_A 14 TEVLVEEAIRFLKR---MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE-RFGAVVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHHTT---CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHH
T ss_pred HHHHHHHHHHHhhh---cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH-HhCCceEEEEcchH
Confidence 45566666666652 145689999999999998888765 79999999998865543322 22222223333444
Q ss_pred CCCCCC-----CCeeEEEeccccccccCCh--------------------------HHHHHHHHHhccCCeEEEEEECCC
Q 008262 331 RLPYPS-----QAFDLIHCSRCRINWTRDD--------------------------GILLLEVNRMLRAGGYFAWAAQPV 379 (572)
Q Consensus 331 ~LPfp~-----~sFDlI~ss~~l~hw~~d~--------------------------~~~L~ei~RvLKPGG~lv~st~P~ 379 (572)
. ++++ ++||+|+|+...++. .+. ..++.++.++|||||++++... .
T Consensus 90 ~-~~~~~~~~~~~fD~i~~npp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-~ 166 (215)
T 4dzr_A 90 E-WLIERAERGRPWHAIVSNPPYIPT-GEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV-G 166 (215)
T ss_dssp H-HHHHHHHTTCCBSEEEECCCCCC-------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC-T
T ss_pred h-hhhhhhhccCcccEEEECCCCCCC-ccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE-C
Confidence 4 4444 899999997543222 111 5788899999999999444433 3
Q ss_pred CCCHHHH
Q 008262 380 YKHEEAQ 386 (572)
Q Consensus 380 ~~tl~EL 386 (572)
.....++
T Consensus 167 ~~~~~~~ 173 (215)
T 4dzr_A 167 HNQADEV 173 (215)
T ss_dssp TSCHHHH
T ss_pred CccHHHH
Confidence 3444433
No 126
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.12 E-value=2.1e-10 Score=119.87 Aligned_cols=113 Identities=13% Similarity=0.207 Sum_probs=83.8
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC--CcEEEecccc
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATR 330 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e 330 (572)
..|.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++ ++..+. +.+...+. ...+...+.+
T Consensus 36 ~~y~~~i~~~l~~----~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~-~~~~~~~l~~~v~~~~~d~~ 109 (348)
T 2y1w_A 36 GTYQRAILQNHTD----FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHHHTGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhcccc----CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH-HHHHHcCCCCcEEEEEcchh
Confidence 3456666666542 35689999999999999888765 799999996 664433 44444454 2345556777
Q ss_pred CCCCCCCCeeEEEeccccccccCC-hHHHHHHHHHhccCCeEEEEE
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d-~~~~L~ei~RvLKPGG~lv~s 375 (572)
.++++ ++||+|+|..+..|+..+ ....+.++.++|||||.++++
T Consensus 110 ~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 110 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 77765 689999998877777544 468888999999999999865
No 127
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.11 E-value=2.3e-10 Score=115.88 Aligned_cols=116 Identities=12% Similarity=0.063 Sum_probs=84.0
Q ss_pred ccccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cE
Q 008262 249 TQFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AM 323 (572)
Q Consensus 249 ~~f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~ 323 (572)
..|..........+.+.+. ++.+|||+|||+|.++..++.. +|+|+|+++.++..++. .+...++. ..
T Consensus 106 ~~f~~~~~~~~~~l~~~~~------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~-n~~~n~~~~~v~ 178 (278)
T 2frn_A 106 IMFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE-NIHLNKVEDRMS 178 (278)
T ss_dssp SCCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHH-HHHHTTCTTTEE
T ss_pred eeEcCCcHHHHHHHHHhCC------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEE
Confidence 3343444444555555543 4689999999999999888764 49999999998866654 34444554 33
Q ss_pred EEeccccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 324 VAAFATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 324 ~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+...|...++. +++||+|++... .....++.++.++|||||++++.+.
T Consensus 179 ~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 179 AYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 55667777765 689999998643 3346889999999999999999864
No 128
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.11 E-value=9.2e-11 Score=122.23 Aligned_cols=114 Identities=17% Similarity=0.185 Sum_probs=81.4
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL 332 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L 332 (572)
...+.+.+.+.. ....+|||+|||+|.++..+++. +|+++|+++.++..+.... ...+....+...|...
T Consensus 183 ~~~~~ll~~l~~----~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~~~~~~d~~~- 256 (343)
T 2pjd_A 183 VGSQLLLSTLTP----HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL-AANGVEGEVFASNVFS- 256 (343)
T ss_dssp HHHHHHHHHSCT----TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHH-HHTTCCCEEEECSTTT-
T ss_pred HHHHHHHHhcCc----CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCCEEEEccccc-
Confidence 344555566641 23468999999999999888653 7999999998886665433 3345544444444433
Q ss_pred CCCCCCeeEEEeccccccc----cCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 333 PYPSQAFDLIHCSRCRINW----TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw----~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+.+++||+|+|+..+++- ..+...++.++.|+|||||.+++...
T Consensus 257 -~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 257 -EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp -TCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred -cccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 347899999998775431 13346899999999999999999864
No 129
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.11 E-value=1.1e-10 Score=123.72 Aligned_cols=116 Identities=16% Similarity=0.221 Sum_probs=80.5
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC----cEEEec
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP----AMVAAF 327 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~----~~~~~~ 327 (572)
+...+.+.+.+.. ....+|||+|||+|.++..++.. +|+++|+++.++..+..... ..++. ..+...
T Consensus 208 d~~~~~ll~~l~~----~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~-~ngl~~~~~v~~~~~ 282 (375)
T 4dcm_A 208 DIGARFFMQHLPE----NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE-TNMPEALDRCEFMIN 282 (375)
T ss_dssp CHHHHHHHHTCCC----SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH-HHCGGGGGGEEEEEC
T ss_pred cHHHHHHHHhCcc----cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHH-HcCCCcCceEEEEec
Confidence 3444455666652 34489999999999999888764 79999999998866654433 33332 233444
Q ss_pred cccCCCCCCCCeeEEEeccccccc--cCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 328 ATRRLPYPSQAFDLIHCSRCRINW--TRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 328 d~e~LPfp~~sFDlI~ss~~l~hw--~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|... ++++++||+|+|+..+++. ..+. ..++.++.++|||||.+++...
T Consensus 283 D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 283 NALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp STTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 5444 5667899999998775432 1121 3689999999999999999864
No 130
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.11 E-value=2.3e-10 Score=118.04 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEeccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
+..+|||||||+|.++..++++ +++++|+ +.++..+.... .+.++ ...+...|.. .+++. +||+|+|..+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRF-LDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhh-hhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 4579999999999999888764 6899999 87776555433 33343 2344455554 45554 8999999999
Q ss_pred cccccCC-hHHHHHHHHHhccCCeEEEEEEC
Q 008262 348 RINWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 348 l~hw~~d-~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++|.++ ...+|++++++|||||++++.+.
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 8888433 26899999999999999999874
No 131
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.11 E-value=1.8e-10 Score=111.87 Aligned_cols=108 Identities=11% Similarity=0.048 Sum_probs=76.9
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
...+.+.+.+. ..+..+|||||||+|.++..+++. +|+++|+++.++..+..... ..+ ...+...|......
T Consensus 57 ~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~-~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 57 NLGIFMLDELD----LHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLS-YYN-NIKLILGDGTLGYE 130 (231)
T ss_dssp HHHHHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHT-TCS-SEEEEESCGGGCCG
T ss_pred HHHHHHHHhcC----CCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHh-hcC-CeEEEECCcccccc
Confidence 44555666554 245679999999999999888775 89999999988755543222 222 33444455554222
Q ss_pred CCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 335 p~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+++||+|++..++.|+. .++.++|||||.+++...
T Consensus 131 ~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 131 EEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp GGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEEC
T ss_pred cCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEc
Confidence 467899999998766652 478999999999999974
No 132
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.10 E-value=4.5e-10 Score=117.25 Aligned_cols=111 Identities=16% Similarity=0.260 Sum_probs=82.7
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL 332 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~L 332 (572)
.+.+.+.+. ..+..+|||||||+|.++..++++ +++++|+ +.++..+..... +.+.. ..+...|....
T Consensus 179 ~~~l~~~~~----~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 179 IQLLLEEAK----LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA-EKGVADRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHHHHCC----CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH-HTTCTTTEEEEECCTTTS
T ss_pred HHHHHHhcC----CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH-hcCCCCCEEEEeCccccC
Confidence 344555554 245689999999999999888764 7899999 888866654433 33432 44555677767
Q ss_pred CCCCCCeeEEEeccccccccCC-hHHHHHHHHHhccCCeEEEEEEC
Q 008262 333 PYPSQAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d-~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++. |+|++..++++|.++ ...+|+++.++|||||++++.+.
T Consensus 253 ~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 253 SYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred CCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 77643 999999998888432 47899999999999999988864
No 133
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.10 E-value=2.8e-10 Score=108.03 Aligned_cols=93 Identities=14% Similarity=0.197 Sum_probs=66.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC------CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-------------
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR------NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------------- 333 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~------~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------------- 333 (572)
.+..+|||||||+|.++..++++ .|+|+|+++... .....+...|...++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~-----------~~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP-----------IPNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC-----------CTTCEEEECCTTTTSSCCC---------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC-----------CCCceEEEccccchhhhhhccccccccc
Confidence 35678999999999998888642 699999998321 112334445666655
Q ss_pred ------------CCCCCeeEEEeccccccccC----ChH-------HHHHHHHHhccCCeEEEEEEC
Q 008262 334 ------------YPSQAFDLIHCSRCRINWTR----DDG-------ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 ------------fp~~sFDlI~ss~~l~hw~~----d~~-------~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++++||+|+|..+ .|+.. +.. .++.++.++|||||.|++..+
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 56689999999765 44421 211 378999999999999999764
No 134
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.09 E-value=8.4e-10 Score=110.98 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=80.5
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCC-cEEEecc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFA 328 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d 328 (572)
..+..++.+.+.+. .+..+|||+|||+|.++..++. .+|+++|+++.++..++.+. ...+.. ..+...|
T Consensus 94 ~te~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~-~~~~~~~v~~~~~d 167 (276)
T 2b3t_A 94 DTECLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNA-QHLAIKNIHILQSD 167 (276)
T ss_dssp THHHHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHH-HHHTCCSEEEECCS
T ss_pred hHHHHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEEcc
Confidence 45566666666654 2457899999999999888874 38999999999886665433 333443 3344444
Q ss_pred ccCCCCCCCCeeEEEecccccccc------------------------CChHHHHHHHHHhccCCeEEEEEE
Q 008262 329 TRRLPYPSQAFDLIHCSRCRINWT------------------------RDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 329 ~e~LPfp~~sFDlI~ss~~l~hw~------------------------~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
... ++++++||+|+|+...+... .+...++.++.++|||||++++..
T Consensus 168 ~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 168 WFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp TTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 433 24467899999984322210 123578899999999999999984
No 135
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.09 E-value=1e-10 Score=124.79 Aligned_cols=121 Identities=10% Similarity=-0.018 Sum_probs=87.3
Q ss_pred cccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHH------HHHcC
Q 008262 250 QFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQF------ALERG 319 (572)
Q Consensus 250 ~f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~------A~~rg 319 (572)
.|.......+..+.+.+. ..+..+|||||||+|.++..++.. .|+|+|+++.++..+.... +...+
T Consensus 153 vYGEt~~~~i~~il~~l~----l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G 228 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIK----MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG 228 (438)
T ss_dssp GGGGTHHHHHHHHHHHHC----CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHhcC----CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 344445566666766665 356789999999999988877642 4999999998776554322 22334
Q ss_pred C---CcEEEeccccCCCCCC--CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 320 A---PAMVAAFATRRLPYPS--QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 320 ~---~~~~~~~d~e~LPfp~--~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+ ...+...|+..+++.+ ..||+|+++.. .++ ++....|.+++|+|||||.|+++.
T Consensus 229 l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~F~-pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 229 KKHAEYTLERGDFLSEEWRERIANTSVIFVNNF-AFG-PEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-TCC-HHHHHHHHHHHTTSCTTCEEEESS
T ss_pred CCCCCeEEEECcccCCccccccCCccEEEEccc-ccC-chHHHHHHHHHHcCCCCcEEEEee
Confidence 3 3445566777777754 47999998755 344 677889999999999999999874
No 136
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.09 E-value=3.3e-10 Score=116.69 Aligned_cols=109 Identities=12% Similarity=0.008 Sum_probs=80.1
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--C---eEEEeCCccchHHHHHHHHHHcCCC-cEEEecccc
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--N---VITMSIAPKDVHENQIQFALERGAP-AMVAAFATR 330 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~---V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e 330 (572)
...+.+.+.+. ..++.+|||||||+|.++..+++. . |+++|+++.++..+.. .+...+.. ..+...|..
T Consensus 62 ~~~~~l~~~l~----~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~g~~~v~~~~~d~~ 136 (317)
T 1dl5_A 62 SLMALFMEWVG----LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR-NVERLGIENVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCGG
T ss_pred HHHHHHHHhcC----CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCeEEEECChh
Confidence 44556666654 246689999999999999888764 4 9999999988866553 33344544 344455666
Q ss_pred CCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
..+..+++||+|++..++.|.. .++.++|||||.++++..
T Consensus 137 ~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBC
T ss_pred hccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEEC
Confidence 6554568899999998866653 578999999999999863
No 137
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.08 E-value=3.1e-10 Score=116.50 Aligned_cols=102 Identities=14% Similarity=0.108 Sum_probs=77.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~ 346 (572)
.+..+|||||||+|.++..+++. +++++|++ .++..+..... ..+.. ..+...|....+++++ ||+|+|..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR-IQGVASRYHTIAGSAFEVDYGND-YDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH-HHTCGGGEEEEESCTTTSCCCSC-EEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH-hcCCCcceEEEecccccCCCCCC-CcEEEEcc
Confidence 35689999999999999888754 79999999 78866654433 23332 3455556666676654 99999999
Q ss_pred ccccccCC-hHHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw~~d-~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++|..+ ...+|+++.++|||||++++.+.
T Consensus 241 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 241 FLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 98888322 26999999999999999999875
No 138
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.08 E-value=1.1e-11 Score=121.44 Aligned_cols=99 Identities=18% Similarity=0.131 Sum_probs=76.1
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
+..+|||+|||+|.++..++.. +|+|+|+++.++..++.. +...++ ...+...|...++ ++++||+|+++..++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNN-AEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 4689999999999999999876 899999999988666543 344454 3445556666665 568999999987755
Q ss_pred cccCChHHHHHHHHHhccCCeEEEEE
Q 008262 350 NWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 350 hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
+. .+....+.++.++|+|||++++.
T Consensus 156 ~~-~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GP-DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SG-GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred Cc-chhhhHHHHHHhhcCCcceeHHH
Confidence 54 55566788999999999997654
No 139
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.07 E-value=4.3e-10 Score=116.61 Aligned_cols=113 Identities=15% Similarity=0.204 Sum_probs=81.0
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEecccc
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATR 330 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e 330 (572)
..|.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++ ++..+. +.+...+.. ..+...+.+
T Consensus 24 ~~y~~ai~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~ 97 (328)
T 1g6q_1 24 LSYRNAIIQNKDL----FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAK-ELVELNGFSDKITLLRGKLE 97 (328)
T ss_dssp HHHHHHHHHHHHH----HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhhHhh----cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHH-HHHHHcCCCCCEEEEECchh
Confidence 3455555444432 24579999999999999888765 799999994 765544 344445543 345566788
Q ss_pred CCCCCCCCeeEEEecccccc--ccCChHHHHHHHHHhccCCeEEEE
Q 008262 331 RLPYPSQAFDLIHCSRCRIN--WTRDDGILLLEVNRMLRAGGYFAW 374 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~h--w~~d~~~~L~ei~RvLKPGG~lv~ 374 (572)
.+++++++||+|+|..+..+ .......++.++.|+|||||.++.
T Consensus 98 ~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 98 DVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 88888889999998754232 224557899999999999999974
No 140
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.06 E-value=2.4e-10 Score=111.78 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=71.9
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC---CCCCCCCeeEEEe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR---LPYPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~---LPfp~~sFDlI~s 344 (572)
.+..+|||+|||+|.++..|++. +|+++|+++.++... .+.++.+ ....+...|... +++.+++||+|++
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~-~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDL-INLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHH-HHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHH-HHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 45679999999999998888653 799999999776443 3455544 233444555554 4556789999998
Q ss_pred ccccccccCCh-HHHHHHHHHhccCCeEEEEEEC
Q 008262 345 SRCRINWTRDD-GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 345 s~~l~hw~~d~-~~~L~ei~RvLKPGG~lv~st~ 377 (572)
... ..+. ..++.++.++|||||+++++..
T Consensus 154 ~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 643 1233 4568889999999999999753
No 141
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.06 E-value=4.3e-10 Score=117.56 Aligned_cols=100 Identities=24% Similarity=0.332 Sum_probs=74.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~ 346 (572)
.+..+|||||||+|.++..+++. +++++|+ +.++..+..... ..++. ..+...|... +++. .||+|++..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFA-DAGLADRVTVAEGDFFK-PLPV-TADVVLLSF 256 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTTS-CCSC-CEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHH-hcCCCCceEEEeCCCCC-cCCC-CCCEEEEec
Confidence 45689999999999999888754 7999999 888766554333 33432 3444455433 3443 499999999
Q ss_pred ccccccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++| .+. ..+|+++.++|||||++++.+.
T Consensus 257 vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 257 VLLNW-SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCC-CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 98888 444 4899999999999999999864
No 142
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.06 E-value=1.2e-10 Score=112.24 Aligned_cols=99 Identities=9% Similarity=0.153 Sum_probs=74.4
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
+..+|||||||+|.++..++.. .|+++|+++.|+.-+.. .+...|....+...|.... .+.++||+|++..+++
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~-~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSS-IIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHH-HHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHH-HHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHH
Confidence 4689999999999999998443 89999999999866553 3445566532222333222 4568899999988866
Q ss_pred cccCChHHHHHHHHHhccCCeEEEEE
Q 008262 350 NWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 350 hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
+. ++....+.++.+.|||||+|+-.
T Consensus 127 lL-~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 127 VL-KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HH-HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred hh-hhhHHHHHHHHHHhCCCCEEEEe
Confidence 66 77777888999999999999654
No 143
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.06 E-value=7.1e-10 Score=109.16 Aligned_cols=108 Identities=10% Similarity=0.066 Sum_probs=80.4
Q ss_pred HHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCC
Q 008262 260 DQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP 333 (572)
Q Consensus 260 ~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LP 333 (572)
..+.+.+. ..+..+|||+|||+|.++..+++. +|+++|+++.++..++.......+.. ..+...|...++
T Consensus 86 ~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 86 SAMVTLLD----LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred HHHHHHcC----CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 34444443 246689999999999988877653 79999999988866655444331332 345555777777
Q ss_pred CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++++||+|++. + .++..++.++.++|||||.+++..+
T Consensus 162 ~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 162 LEEAAYDGVALD-----L-MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CCTTCEEEEEEE-----S-SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCcCEEEEC-----C-cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 888899999973 2 5667899999999999999999974
No 144
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.06 E-value=7.3e-10 Score=114.12 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=75.0
Q ss_pred CEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHc-CCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 276 RVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER-GAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~r-g~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
.+|||||||+|.++..++++ +++++|+ +.++..+........ .....+...|... +++ ++||+|++..++++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 89999999999999888754 6999999 888866654433221 1123445555544 555 68999999999888
Q ss_pred ccCChH--HHHHHHHHhccCCeEEEEEEC
Q 008262 351 WTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 351 w~~d~~--~~L~ei~RvLKPGG~lv~st~ 377 (572)
| .+.. .+|++++++|||||++++.+.
T Consensus 246 ~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 246 L-DEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp C-CHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred C-CHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 8 4444 999999999999999999974
No 145
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.06 E-value=2.8e-10 Score=111.35 Aligned_cols=94 Identities=17% Similarity=0.144 Sum_probs=69.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC----CCCCCCCeeEEEe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR----LPYPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~----LPfp~~sFDlI~s 344 (572)
.+..+|||+|||+|.++..|++. .|+++|+++.++..+.. .+... ....+...|... +++. ++||+|++
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~-~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~ 149 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLD-ACAER-ENIIPILGDANKPQEYANIV-EKVDVIYE 149 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHH-HTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHH-HhhcC-CCeEEEECCCCCcccccccC-ccEEEEEE
Confidence 45679999999999998887653 69999999988755442 22222 233344456666 6766 78999993
Q ss_pred ccccccccCCh---HHHHHHHHHhccCCeEEEEE
Q 008262 345 SRCRINWTRDD---GILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 345 s~~l~hw~~d~---~~~L~ei~RvLKPGG~lv~s 375 (572)
. . .++ ..++.++.++|||||+++++
T Consensus 150 ~-----~-~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 D-----V-AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp C-----C-CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred e-----c-CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 2 2 344 67799999999999999996
No 146
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=9.3e-10 Score=105.65 Aligned_cols=107 Identities=14% Similarity=0.155 Sum_probs=75.2
Q ss_pred HHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccC
Q 008262 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRR 331 (572)
Q Consensus 258 ~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~ 331 (572)
....+.+.+. ..+..+|||||||+|.++..+++ .+|+++|+++.++..+..... ..+.. ..+...+...
T Consensus 65 ~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~~~ 139 (215)
T 2yxe_A 65 MVGMMCELLD----LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLR-KLGYDNVIVIVGDGTL 139 (215)
T ss_dssp HHHHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEESCGGG
T ss_pred HHHHHHHhhC----CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCeEEEECCccc
Confidence 3445555554 24567999999999998887765 379999999988866654333 33433 3334444422
Q ss_pred CCCC-CCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 332 LPYP-SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 332 LPfp-~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++ +++||+|++..++.++. .++.++|||||.+++...
T Consensus 140 -~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 140 -GYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp -CCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEES
T ss_pred -CCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEEC
Confidence 333 57899999998766652 488999999999999974
No 147
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.05 E-value=7.4e-10 Score=110.81 Aligned_cols=109 Identities=18% Similarity=0.107 Sum_probs=81.1
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcC--C-CcEEEecccc
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERG--A-PAMVAAFATR 330 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg--~-~~~~~~~d~e 330 (572)
+..+.+.+. ..+..+|||+|||+|.++..++.. +|+++|+++.++..+........+ . ...+...|..
T Consensus 88 ~~~i~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 88 AAQIVHEGD----IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHHHHHcC----CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 344444444 245679999999999998887752 799999999888666654444312 2 3345556777
Q ss_pred CCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+++++++||+|++.. .++..++.++.++|||||++++.++
T Consensus 164 ~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 164 DSELPDGSVDRAVLDM------LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GCCCCTTCEEEEEEES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred hcCCCCCceeEEEECC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 7788788999999742 4566899999999999999999974
No 148
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.05 E-value=4.4e-10 Score=110.18 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=78.5
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC---cEEE
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP---AMVA 325 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~---~~~~ 325 (572)
....++..+..... ..+..+|||||||+|..+..|++. +|+++|+++.++..++..+ ...+.. ..+.
T Consensus 40 ~~~~~l~~l~~~~~----~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 40 MTGQLLTTLAATTN----GNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALF-REAGYSPSRVRFL 114 (221)
T ss_dssp HHHHHHHHHHHHSC----CTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHH-HHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHhhC----CCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCcCcEEEE
Confidence 34455555554443 223459999999999988887652 7999999999886665433 344544 3344
Q ss_pred eccccC-CC-CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 326 AFATRR-LP-YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 326 ~~d~e~-LP-fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
..|... ++ +++++||+|++... ..+...++.++.++|||||++++..
T Consensus 115 ~gda~~~l~~~~~~~fD~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 115 LSRPLDVMSRLANDSYQLVFGQVS----PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CSCHHHHGGGSCTTCEEEEEECCC----TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred EcCHHHHHHHhcCCCcCeEEEcCc----HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 444332 33 34689999997643 2445789999999999999999864
No 149
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.04 E-value=8.7e-10 Score=108.79 Aligned_cols=106 Identities=12% Similarity=0.121 Sum_probs=77.8
Q ss_pred HHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCC
Q 008262 260 DQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL 332 (572)
Q Consensus 260 ~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~L 332 (572)
..+...+. ..+..+|||+|||+|.++..++.. +|+++|+++.++..+..... ..+.. ..+...|...
T Consensus 83 ~~i~~~~~----~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~- 156 (255)
T 3mb5_A 83 ALIVAYAG----ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK-WAGFDDRVTIKLKDIYE- 156 (255)
T ss_dssp HHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH-HHTCTTTEEEECSCGGG-
T ss_pred HHHHHhhC----CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHH-HcCCCCceEEEECchhh-
Confidence 34444444 246789999999999998887654 79999999988866654433 34443 3444555553
Q ss_pred CCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 333 PYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++++||+|++.. .++..++.++.++|||||.+++..+
T Consensus 157 ~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 157 GIEEENVDHVILDL------PQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCCCCSEEEEEECS------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred ccCCCCcCEEEECC------CCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 36778999999742 4667899999999999999999863
No 150
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.04 E-value=2.6e-10 Score=112.82 Aligned_cols=116 Identities=17% Similarity=0.115 Sum_probs=76.1
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC------CeEEEeCCccchHHHHHHHHHHc--CCC-------
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR------NVITMSIAPKDVHENQIQFALER--GAP------- 321 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~------~V~gvDiSp~dl~~a~~~~A~~r--g~~------- 321 (572)
..++.+.+.+. .....+|||+|||+|.++..++.. +|+|+|+++.++..++....... ++.
T Consensus 38 ~l~~~~l~~~~----~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~ 113 (250)
T 1o9g_A 38 EIFQRALARLP----GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERR 113 (250)
T ss_dssp HHHHHHHHTSS----CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc----cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhh
Confidence 45555554443 234578999999999988877643 79999999998866653322110 110
Q ss_pred --------------------cE-------------EEeccccCCCC-----CCCCeeEEEeccccccccC--------Ch
Q 008262 322 --------------------AM-------------VAAFATRRLPY-----PSQAFDLIHCSRCRINWTR--------DD 355 (572)
Q Consensus 322 --------------------~~-------------~~~~d~e~LPf-----p~~sFDlI~ss~~l~hw~~--------d~ 355 (572)
.. +...|...... ..++||+|+|+...++... ..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~ 193 (250)
T 1o9g_A 114 EQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPV 193 (250)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHH
T ss_pred hhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHH
Confidence 11 44445443211 3458999999866544321 12
Q ss_pred HHHHHHHHHhccCCeEEEEEE
Q 008262 356 GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 356 ~~~L~ei~RvLKPGG~lv~st 376 (572)
..++.++.++|||||+++++.
T Consensus 194 ~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 194 AGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEeC
Confidence 489999999999999999965
No 151
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.03 E-value=5.4e-10 Score=115.92 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=75.7
Q ss_pred CCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCC-CCCCCeeEEEeccc
Q 008262 275 IRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP-YPSQAFDLIHCSRC 347 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LP-fp~~sFDlI~ss~~ 347 (572)
..+|||||||+|.++..++++ +++++|+ +.++..+... ....+.. ..+...|....+ +.++.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKT-IHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHH-HHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHH-HHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 789999999999999888764 7899999 7677555433 3333432 344455655554 23467999999999
Q ss_pred cccccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 348 RINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 348 l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++| .+. ..+|++++++|||||++++.+.
T Consensus 258 lh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 258 LHYF-DAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp GGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccC-CHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8888 443 6999999999999999999864
No 152
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.03 E-value=5.7e-10 Score=117.42 Aligned_cols=95 Identities=18% Similarity=0.212 Sum_probs=70.9
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
....+|||||||+|.++..++++ +++++|+ +.++ +.+++. ....+...|... +++++ |+|++..++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-----~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vl 271 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVI-----QDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWIC 271 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-----TTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHH-----Hhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechh
Confidence 35689999999999999988764 6889998 6544 222222 233455556554 66654 999999998
Q ss_pred ccccCCh-HHHHHHHHHhccCCeEEEEEEC
Q 008262 349 INWTRDD-GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d~-~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++|..+. ..+|++++++|||||++++.+.
T Consensus 272 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 272 HDWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp GGBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8884332 4899999999999999999874
No 153
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.03 E-value=1.3e-10 Score=123.60 Aligned_cols=92 Identities=11% Similarity=0.068 Sum_probs=70.8
Q ss_pred CCCEEEEECCC------CchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCC------C
Q 008262 274 HIRVVMDAGCG------VASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP------S 336 (572)
Q Consensus 274 ~~~~VLDIGCG------tG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp------~ 336 (572)
+..+||||||| +|..+..++. .+|+|+|+++.|. .......+...|+..+++. +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 46899999999 6655544443 3899999999873 1223345666788888877 7
Q ss_pred CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 337 QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 337 ~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
++||+|+|.. .+++ .+...+|.+++|+|||||+|++.+
T Consensus 287 ~sFDlVisdg-sH~~-~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 287 GPFDIVIDDG-SHIN-AHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CCEEEEEECS-CCCH-HHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccEEEECC-cccc-hhHHHHHHHHHHhcCCCeEEEEEe
Confidence 8999999874 3444 677899999999999999999985
No 154
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.02 E-value=3.3e-10 Score=115.17 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=71.2
Q ss_pred CCEEEEECCCCch----hHHHhcc--------CCeEEEeCCccchHHHHHHHH---H---------H----------cC-
Q 008262 275 IRVVMDAGCGVAS----FGAYLLP--------RNVITMSIAPKDVHENQIQFA---L---------E----------RG- 319 (572)
Q Consensus 275 ~~~VLDIGCGtG~----~a~~L~~--------~~V~gvDiSp~dl~~a~~~~A---~---------~----------rg- 319 (572)
..+|||+|||||. ++..|++ .+|+|+|+|+.++..++...- . . .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999996 5544443 279999999999976654210 0 0 00
Q ss_pred --------CCcEEEeccccCCCCC-CCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEEEE
Q 008262 320 --------APAMVAAFATRRLPYP-SQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 320 --------~~~~~~~~d~e~LPfp-~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~s 375 (572)
....+...|....|++ .+.||+|+|.++++++ ++. ..++.+++++|||||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0123444455555565 5789999999887777 444 58999999999999999886
No 155
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.02 E-value=8.3e-10 Score=107.16 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=71.3
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CCCC-----CCCee
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYP-----SQAFD 340 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LPfp-----~~sFD 340 (572)
+..+|||||||+|.++..|++. +|+++|+++.++..++.... ..+.. ..+...|... ++.. .++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLN-FAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH-HcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 4579999999999999988763 79999999998866654333 33443 3344444422 3322 27899
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+|++.....++ .+...++.++ ++|||||++++...
T Consensus 137 ~V~~d~~~~~~-~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 137 MVFLDHWKDRY-LPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EEEECSCGGGH-HHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEEcCCcccc-hHHHHHHHhc-cccCCCeEEEEeCC
Confidence 99987654444 3434677777 99999999999864
No 156
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.01 E-value=5.6e-10 Score=112.32 Aligned_cols=97 Identities=10% Similarity=0.143 Sum_probs=73.6
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHc-CCC-cEEEeccccCCCCCCCCeeEEEec
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALER-GAP-AMVAAFATRRLPYPSQAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~r-g~~-~~~~~~d~e~LPfp~~sFDlI~ss 345 (572)
.+..+|||+|||+|.++..+++. +|+++|+++.++..+.... ... +.. ..+...|... ++++++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL-SEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH-HTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH-HhcCCCCcEEEEECchhc-cCcCCCccEEEEc
Confidence 46689999999999988887643 7999999998886555433 233 433 3444455554 5667899999973
Q ss_pred cccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. +++..+|.++.++|||||++++++.
T Consensus 187 -----~-~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 187 -----I-PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp -----C-SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred -----C-cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 5667899999999999999999974
No 157
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.01 E-value=5e-10 Score=109.87 Aligned_cols=98 Identities=7% Similarity=0.093 Sum_probs=73.5
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CC-CCCCCeeEEEec
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LP-YPSQAFDLIHCS 345 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LP-fp~~sFDlI~ss 345 (572)
+..+|||||||+|.++..|+.. +|+++|+++.++..++.. +...++. ..+...|... ++ ..+++||+|++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQN-LATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHH-HHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 4579999999999999988873 799999999988666543 3344542 3444455533 44 446899999975
Q ss_pred cccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 346 ~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.. ..+...++.++.++|||||+|++..
T Consensus 150 ~~----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 150 AA----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TT----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred Cc----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 32 3556789999999999999998864
No 158
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.01 E-value=7.6e-10 Score=109.43 Aligned_cols=102 Identities=19% Similarity=0.203 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHc-------CCC-cEEEeccccC-CC--CCCCC
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER-------GAP-AMVAAFATRR-LP--YPSQA 338 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~r-------g~~-~~~~~~d~e~-LP--fp~~s 338 (572)
+..+|||||||+|.++..++.. +|+|+|+++.++..+.......+ +.. ..+...|+.. ++ +++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4578999999999999888764 69999999998866654433321 433 3344455554 66 77889
Q ss_pred eeEEEeccccccccCC--------hHHHHHHHHHhccCCeEEEEEE
Q 008262 339 FDLIHCSRCRINWTRD--------DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 339 FDlI~ss~~l~hw~~d--------~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|.|+.... ..|... ...++.++.++|||||.|++.+
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 999985432 122110 0489999999999999999986
No 159
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.01 E-value=2.4e-09 Score=109.71 Aligned_cols=122 Identities=14% Similarity=0.115 Sum_probs=76.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHc-----CCCcEEEecccc-CCCCCCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER-----GAPAMVAAFATR-RLPYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~r-----g~~~~~~~~d~e-~LPfp~~sFDlI 342 (572)
.++++|||||||+|.++..+++. +|+++|+++.++..++..+.... .....+...|.. -+...+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 35689999999999999998875 69999999998866654433321 112334444443 344456899999
Q ss_pred EeccccccccCCh----HHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHh
Q 008262 343 HCSRCRINWTRDD----GILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLD 395 (572)
Q Consensus 343 ~ss~~l~hw~~d~----~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~ 395 (572)
++... .++.... ..+++++.|+|||||.|++.........+.+......+..
T Consensus 162 i~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~ 217 (294)
T 3adn_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSH 217 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred EECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHH
Confidence 98643 4443322 5799999999999999999752122223334444434433
No 160
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.00 E-value=8.1e-10 Score=116.14 Aligned_cols=95 Identities=18% Similarity=0.184 Sum_probs=71.5
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
....+|||||||+|.++..++++ +++++|+ +.++ +.+++. ....+...|... |++.+ |+|++..++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-----~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vl 269 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVI-----SEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWIL 269 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-----TTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHH-----Hhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHh
Confidence 35689999999999999988764 6889998 5444 222222 234455556665 77754 999999998
Q ss_pred ccccCC-hHHHHHHHHHhccCCeEEEEEEC
Q 008262 349 INWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d-~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++|..+ ...+|++++++|||||+|++.+.
T Consensus 270 h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 270 HDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp GGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 888433 25899999999999999999864
No 161
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.00 E-value=9.8e-10 Score=103.64 Aligned_cols=94 Identities=16% Similarity=0.086 Sum_probs=64.6
Q ss_pred CCCCEEEEECCCCchhHHHhcc-------------CCeEEEeCCccchHHHHHHHHHHcCCCcEEE-eccccCCC-----
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP-------------RNVITMSIAPKDVHENQIQFALERGAPAMVA-AFATRRLP----- 333 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~-------------~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~-~~d~e~LP----- 333 (572)
.+..+|||||||+|.++..|++ .+|+++|+++... .....+. ..|....+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----------~~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----------LEGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----------CTTCEEECSCCTTSHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----------CCCCeEEEeccCCCHHHHHHH
Confidence 4568999999999999888764 3599999998421 0112233 33433322
Q ss_pred ---CCCCCeeEEEecccc---ccccCCh-------HHHHHHHHHhccCCeEEEEEEC
Q 008262 334 ---YPSQAFDLIHCSRCR---INWTRDD-------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 ---fp~~sFDlI~ss~~l---~hw~~d~-------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++++||+|+|..+. .++..+. ..++.++.++|||||.|++..+
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 345689999986432 2232333 3789999999999999999974
No 162
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.00 E-value=1.3e-09 Score=107.86 Aligned_cols=154 Identities=13% Similarity=0.123 Sum_probs=90.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEe-ccc-----cCCCCCCCCeeEEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAA-FAT-----RRLPYPSQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~-~d~-----e~LPfp~~sFDlI~ 343 (572)
....+|||||||+|.++..|++. +|+|+|+|+.|+.. ++.+........ .+. +.++ ...||.+.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~-----a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~ 108 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAW-----KIRSDERVVVMEQFNFRNAVLADFE--QGRPSFTS 108 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCH-----HHHTCTTEEEECSCCGGGCCGGGCC--SCCCSEEE
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHH-----HHHhCccccccccceEEEeCHhHcC--cCCCCEEE
Confidence 35679999999999999888865 79999999999854 333222111110 011 2222 11244444
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHhhhhhhchhhhhccCc---EEEeeccchh
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGY---IAIWKKPTNN 420 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~~~~~l~w~~v~~~g~---i~iw~kpl~~ 420 (572)
+..++.++ ..+|.++.|+|||||+|++...| .. ...+.. +.+.+. .........+
T Consensus 109 ~D~v~~~l----~~~l~~i~rvLkpgG~lv~~~~p----~~--e~~~~~------------~~~~G~~~d~~~~~~~~~~ 166 (232)
T 3opn_A 109 IDVSFISL----DLILPPLYEILEKNGEVAALIKP----QF--EAGREQ------------VGKNGIIRDPKVHQMTIEK 166 (232)
T ss_dssp ECCSSSCG----GGTHHHHHHHSCTTCEEEEEECH----HH--HSCHHH------------HC-CCCCCCHHHHHHHHHH
T ss_pred EEEEhhhH----HHHHHHHHHhccCCCEEEEEECc----cc--ccCHHH------------hCcCCeecCcchhHHHHHH
Confidence 43333332 77999999999999999997421 11 111111 111110 0001112334
Q ss_pred HHHHHHhcCCCCCccCCCCCCccccCCCHHHHHhhcc
Q 008262 421 SCYLNREAGTIPPLCDPDDNPDNVWYVDLKACITRLP 457 (572)
Q Consensus 421 ~c~ll~~aGF~~p~cd~~~~~~~~wY~~l~~~L~~L~ 457 (572)
....++++||....++ ..+++.+|.+++.++.--+
T Consensus 167 l~~~l~~aGf~v~~~~--~~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 167 VLKTATQLGFSVKGLT--FSPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp HHHHHHHHTEEEEEEE--ECSSCBTTTBCCEEEEEEE
T ss_pred HHHHHHHCCCEEEEEE--EccCCCCCCCHHHHHHHhh
Confidence 5667889999876655 6677778888777665433
No 163
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.00 E-value=1.3e-09 Score=110.13 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=68.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC-CeEEEeCCccchHHHHHHHHHHcCC-------CcEEE--eccccCCCCCCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGA-------PAMVA--AFATRRLPYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiSp~dl~~a~~~~A~~rg~-------~~~~~--~~d~e~LPfp~~sFDlI 342 (572)
.+..+|||||||+|.++..++++ .|+|+|+++ |+.. +.+... ...+. ..|+..++ +++||+|
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~-----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 144 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVG-----GHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVI 144 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCS-----SCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhh-----hhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEE
Confidence 45689999999999999998876 899999998 5311 111111 23444 55666665 6899999
Q ss_pred EeccccccccCCh----H---HHHHHHHHhccCCe--EEEEEEC
Q 008262 343 HCSRCRINWTRDD----G---ILLLEVNRMLRAGG--YFAWAAQ 377 (572)
Q Consensus 343 ~ss~~l~hw~~d~----~---~~L~ei~RvLKPGG--~lv~st~ 377 (572)
+|..+ +...+. . .+|.++.|+||||| .|++..+
T Consensus 145 ~sd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 145 MCDVG--ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp EECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred EEeCc--ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 99754 332222 1 37899999999999 9999875
No 164
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.00 E-value=1.4e-09 Score=110.55 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=69.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC-CeEEEeCCccchHHHHHHHHHHcCC-------CcEEE--eccccCCCCCCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGA-------PAMVA--AFATRRLPYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiSp~dl~~a~~~~A~~rg~-------~~~~~--~~d~e~LPfp~~sFDlI 342 (572)
.+..+|||||||+|.++..++++ .|+|+|+++ |+.. +.++.. ...+. ..|+..++ +++||+|
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~-----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 152 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTS-----GHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTV 152 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCT-----TSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhh-----hhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEE
Confidence 45689999999999999999886 899999998 5411 111111 23444 55677766 6899999
Q ss_pred EeccccccccCCh----H---HHHHHHHHhccCCe--EEEEEEC
Q 008262 343 HCSRCRINWTRDD----G---ILLLEVNRMLRAGG--YFAWAAQ 377 (572)
Q Consensus 343 ~ss~~l~hw~~d~----~---~~L~ei~RvLKPGG--~lv~st~ 377 (572)
+|..+ ++..+. . .+|.++.|+||||| .|++..+
T Consensus 153 vsd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 153 LCDIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp EECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred EECCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 99754 332221 1 37899999999999 9999875
No 165
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.99 E-value=2.2e-09 Score=103.97 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=71.4
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcC-----C-CcEEEeccccCCCCCCCCeeE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERG-----A-PAMVAAFATRRLPYPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg-----~-~~~~~~~d~e~LPfp~~sFDl 341 (572)
.+..+|||||||+|.++..|++. +|+++|+++.++..++..... .+ . ...+...|....+..+++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK-DDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh-hcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 45689999999999988877642 799999999888666544332 22 1 233444555555555678999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|++.....+. +.++.++|||||.++++..
T Consensus 155 i~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAAPVV-------PQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEECSBBSSC-------CHHHHHTEEEEEEEEEEES
T ss_pred EEECCchHHH-------HHHHHHhcCCCcEEEEEEe
Confidence 9988765443 4688999999999999974
No 166
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.99 E-value=1.2e-09 Score=113.62 Aligned_cols=100 Identities=23% Similarity=0.331 Sum_probs=74.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~ 346 (572)
.+..+|||||||+|.++..+++. .++++|+ +.++..+.... ...+.. ..+...|... +++. .||+|++..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYL-KDEGLSDRVDVVEGDFFE-PLPR-KADAIILSF 257 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHH-HHTTCTTTEEEEECCTTS-CCSS-CEEEEEEES
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHH-HhcCCCCceEEEeCCCCC-CCCC-CccEEEEcc
Confidence 45689999999999999888754 6888999 87776655433 333432 3444455433 3443 499999999
Q ss_pred ccccccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++| .+. ..+|+++.++|||||++++.+.
T Consensus 258 vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 258 VLLNW-PDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp CGGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cccCC-CHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 98888 444 4899999999999999999875
No 167
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.99 E-value=1.1e-09 Score=107.16 Aligned_cols=107 Identities=14% Similarity=0.158 Sum_probs=74.8
Q ss_pred HHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc---CCeEEEeCCccchHHHHHHHHHHcCCCc-EEEeccccCCC
Q 008262 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP---RNVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLP 333 (572)
Q Consensus 258 ~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~---~~V~gvDiSp~dl~~a~~~~A~~rg~~~-~~~~~d~e~LP 333 (572)
....+.+.+. ..+..+|||||||+|.++..+++ .+|+++|+++.++..+..... ..+... .+...|. ..+
T Consensus 79 ~~~~~~~~l~----~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 79 MVAIMLEIAN----LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE-RAGVKNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHT----CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCG-GGC
T ss_pred HHHHHHHhcC----CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEECCc-ccC
Confidence 3445555554 24567899999999999988876 489999999988766554333 344433 3334443 445
Q ss_pred CCCC-CeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 334 YPSQ-AFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 fp~~-sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++ .||+|++..++.++. .++.++|||||.++++..
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEe
Confidence 5544 499999987755552 378999999999999974
No 168
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.98 E-value=1.4e-09 Score=108.99 Aligned_cols=105 Identities=11% Similarity=0.080 Sum_probs=73.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH--cCCC--cEEEeccccCC-------CCCCC
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE--RGAP--AMVAAFATRRL-------PYPSQ 337 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~--rg~~--~~~~~~d~e~L-------Pfp~~ 337 (572)
.+..+|||+|||+|.++..|+.+ +|+++|+++.++..+....... .++. ..+...|...+ +++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 35679999999999998888754 7999999998875554332210 2332 34455566655 35678
Q ss_pred CeeEEEeccccccc-----------------cCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 338 AFDLIHCSRCRINW-----------------TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 338 sFDlI~ss~~l~hw-----------------~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+||+|+|+...... ......++.++.++|||||+|++...
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999997432211 12356889999999999999999863
No 169
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.98 E-value=3.9e-09 Score=110.09 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=80.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-c---CCCcEEEeccccCC-C-CCCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-R---GAPAMVAAFATRRL-P-YPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-r---g~~~~~~~~d~e~L-P-fp~~sFDlI 342 (572)
....+|||||||+|.++..|++. +|+++|+++.++..++..+... . .....+...|.... + +++++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 35689999999999999999865 7999999999886665443321 1 12334444454332 2 346799999
Q ss_pred Eecccccccc--CC--hHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHH
Q 008262 343 HCSRCRINWT--RD--DGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEML 394 (572)
Q Consensus 343 ~ss~~l~hw~--~d--~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e 394 (572)
++... .++. .+ ...++.++.|+|||||.|++.....+.........+..+.
T Consensus 199 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 253 (334)
T 1xj5_A 199 IVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCR 253 (334)
T ss_dssp EECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHH
T ss_pred EECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHH
Confidence 98643 2222 11 2689999999999999999974323444444444444443
No 170
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.98 E-value=2.2e-09 Score=104.41 Aligned_cols=109 Identities=14% Similarity=0.211 Sum_probs=75.0
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc----------CCeEEEeCCccchHHHHHHHHHHc-----CCCcE
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP----------RNVITMSIAPKDVHENQIQFALER-----GAPAM 323 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~----------~~V~gvDiSp~dl~~a~~~~A~~r-----g~~~~ 323 (572)
...+.+.+... ..+..+|||||||+|.++..|++ .+|+++|+++.++..+........ .....
T Consensus 71 ~~~~~~~l~~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 148 (227)
T 1r18_A 71 HAFALEYLRDH--LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL 148 (227)
T ss_dssp HHHHHHHTTTT--CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHhh--CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE
Confidence 34444554311 24567999999999998887765 279999999988876654443321 11233
Q ss_pred EEeccccCCCCCC-CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 324 VAAFATRRLPYPS-QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 324 ~~~~d~e~LPfp~-~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+...|... ++++ ++||+|++...+.+. +.++.++|||||.+++...
T Consensus 149 ~~~~d~~~-~~~~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 149 IVEGDGRK-GYPPNAPYNAIHVGAAAPDT-------PTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEESCGGG-CCGGGCSEEEEEECSCBSSC-------CHHHHHTEEEEEEEEEEES
T ss_pred EEECCccc-CCCcCCCccEEEECCchHHH-------HHHHHHHhcCCCEEEEEEe
Confidence 44445444 4444 789999998775554 3789999999999999864
No 171
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.98 E-value=8.6e-10 Score=114.14 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=68.5
Q ss_pred CCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHc------C-----CCcEEEeccccCC--CC
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALER------G-----APAMVAAFATRRL--PY 334 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~r------g-----~~~~~~~~d~e~L--Pf 334 (572)
.++.+|||+|||+|.++..|+. .+|+++|+++.++..+........ + ....+...|...+ ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 4568999999999998888765 369999999988876665444311 1 1234445566555 56
Q ss_pred CCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 335 p~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++||+|++.. .++..++.++.++|||||.|++...
T Consensus 184 ~~~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 184 KSLTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ----EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 677899999853 2334589999999999999998863
No 172
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.97 E-value=1.8e-09 Score=107.16 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=72.1
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CCCC--CCCeeEEE
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYP--SQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LPfp--~~sFDlI~ 343 (572)
+..+|||||||+|..+..|++. +|+++|+++.++..++... ...+.. ..+...|... ++.. .++||+|+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENL-QLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4589999999999999888764 7999999998886665433 334443 3444445433 4432 34899999
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+... ..+...++.++.++|||||++++..
T Consensus 142 ~d~~----~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 142 IDAD----KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred ECCc----hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 8542 3445789999999999999999885
No 173
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.97 E-value=6.6e-10 Score=116.72 Aligned_cols=93 Identities=16% Similarity=0.197 Sum_probs=70.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.+..+|||||||+|.++..++++ .++++|+ +.++. .+++. ....+...|... +++. ||+|++..++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~-----~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~l 277 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIE-----NAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVC 277 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHT-----TCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHH-----hhhhc-CCCEEEeCCccc-CCCC--CCEEEEeccc
Confidence 35689999999999999988765 5777898 65552 22221 123444556655 6654 9999999998
Q ss_pred ccccCChH--HHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDG--ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~--~~L~ei~RvLKPGG~lv~st 376 (572)
+|| .+.. .+|++++|+|||||++++.+
T Consensus 278 h~~-~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 278 HNW-SDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp GGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccC-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 888 5555 99999999999999999985
No 174
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.97 E-value=9.9e-10 Score=118.39 Aligned_cols=114 Identities=11% Similarity=0.007 Sum_probs=77.7
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHH--HH----HHHHHcC--CCc-E
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHEN--QI----QFALERG--APA-M 323 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a--~~----~~A~~rg--~~~-~ 323 (572)
..+..+.+.+. ..+..+|||||||+|.++..++.. .|+|+|+++.++..+ +. +.+...+ ... .
T Consensus 229 ~~v~~ml~~l~----l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 229 NFLSDVYQQCQ----LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHHHHTT----CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHHHHhcC----CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 34455555554 246789999999999999888763 599999999887655 22 2223345 223 2
Q ss_pred EEeccccCC--CC--CCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 324 VAAFATRRL--PY--PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 324 ~~~~d~e~L--Pf--p~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+...+.... ++ ..++||+|+++..+ +..+...+|.++.|+|||||.+++..
T Consensus 305 ~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 305 FSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred EEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 333222211 22 24789999987554 33666789999999999999999874
No 175
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.97 E-value=2.4e-09 Score=106.35 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=75.1
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~ 331 (572)
.....+...+..+ ...++.+|||+|||+|.++..+++. .|+++|+++.|+.. .++.++++. ...+...|+..
T Consensus 60 kla~~ll~~l~~~-~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~-l~~~a~~r~-nv~~i~~Da~~ 136 (232)
T 3id6_C 60 KLAGAILKGLKTN-PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE-LLLVAQRRP-NIFPLLADARF 136 (232)
T ss_dssp HHHHHHHTTCSCC-SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH-HHHHHHHCT-TEEEEECCTTC
T ss_pred HHHHHHHhhhhhc-CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH-HHHHhhhcC-CeEEEEccccc
Confidence 3455565555432 2356789999999999999887753 79999999988644 234455442 33344445443
Q ss_pred CC---CCCCCeeEEEeccccccccCChHHH-HHHHHHhccCCeEEEEEE
Q 008262 332 LP---YPSQAFDLIHCSRCRINWTRDDGIL-LLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 332 LP---fp~~sFDlI~ss~~l~hw~~d~~~~-L~ei~RvLKPGG~lv~st 376 (572)
.. ...++||+|++... . .+.... +..+.++|||||+|+++.
T Consensus 137 ~~~~~~~~~~~D~I~~d~a-~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIA-Q---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp GGGTTTTCCCEEEEEECCC-C---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhccccceEEEEecCC-C---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 21 12468999998743 2 344444 456667999999999985
No 176
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.96 E-value=3e-09 Score=109.23 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=71.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHH---H-cCCCcEEEeccccCCCC--CCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFAL---E-RGAPAMVAAFATRRLPY--PSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~---~-rg~~~~~~~~d~e~LPf--p~~sFDlI 342 (572)
.++.+|||||||+|.++..+++. +|+++|+++.++..++..+.. . ......+...|...++. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 35689999999999999998865 799999999888655543321 1 11223444455544432 46899999
Q ss_pred EeccccccccCCh----HHHHHHHHHhccCCeEEEEEEC
Q 008262 343 HCSRCRINWTRDD----GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 343 ~ss~~l~hw~~d~----~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++... .++.... ..+++++.|+|||||.|++...
T Consensus 174 i~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 174 IIDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 98754 3332222 5889999999999999999863
No 177
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.95 E-value=1.9e-09 Score=104.55 Aligned_cols=97 Identities=12% Similarity=0.060 Sum_probs=71.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC---------CeEEEeCCccchHHHHHHHHHHcC-----C-CcEEEeccccCCC----
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---------NVITMSIAPKDVHENQIQFALERG-----A-PAMVAAFATRRLP---- 333 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---------~V~gvDiSp~dl~~a~~~~A~~rg-----~-~~~~~~~d~e~LP---- 333 (572)
.+..+|||||||+|.++..+++. +|+++|+++.++..+...... .+ . ...+...|.....
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKR-DKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHH-HCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHH-cCccccccCCEEEEECChHhcccccC
Confidence 35689999999999988877642 799999999888666544443 23 2 2344445555544
Q ss_pred CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
...++||+|++.....+. +.++.++|||||.+++...
T Consensus 158 ~~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL-------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSC-------CHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEc
Confidence 456789999998765443 5788999999999999863
No 178
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.95 E-value=2.3e-10 Score=106.74 Aligned_cols=87 Identities=17% Similarity=0.092 Sum_probs=65.6
Q ss_pred CCCCEEEEECCCCchhHHHhccCCeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCCC---CCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPRNVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPY---PSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LPf---p~~sFDlI~ss~~l 348 (572)
+++.+|||||||. | ++|+|+.|+. .|+++.. ...+...|++.+++ ++++||+|+|+.++
T Consensus 11 ~~g~~vL~~~~g~-----------v-~vD~s~~ml~-----~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------S-PVEALKGLVD-----KLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CTTSEEEEEECTT-----------S-CHHHHHHHHH-----HHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCEEEEecCCc-----------e-eeeCCHHHHH-----HHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 5678999999996 2 2677776664 4443321 24455567788877 78999999998775
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+..+...+|++++|+|||||+|++..
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 5543788999999999999999999974
No 179
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.95 E-value=4.6e-10 Score=116.84 Aligned_cols=97 Identities=20% Similarity=0.116 Sum_probs=69.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss~ 346 (572)
.+..+|||||||+|.++..++++ +++++|++. ++. .+.+...+. ...+...|.. .+++ +||+|++..
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~---~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~ 255 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA---RHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR 255 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT---TCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh---cccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh
Confidence 45689999999999999888764 688888843 221 000111111 2344455553 3444 899999999
Q ss_pred ccccccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++++| ++. ..+|++++|+|||||+|++.+.
T Consensus 256 vlh~~-~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 256 ILHNW-GDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp CGGGS-CHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred hccCC-CHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 98888 555 5999999999999999999874
No 180
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.95 E-value=3.7e-09 Score=101.26 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=66.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCC-----------CCCe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP-----------SQAF 339 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp-----------~~sF 339 (572)
.+..+|||+|||+|.++..++++ .|+|+|+++... .....+...|+...+.. .++|
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 46789999999999999999876 799999998521 11233445565554421 1489
Q ss_pred eEEEecccc---ccccCC-------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 340 DLIHCSRCR---INWTRD-------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 340 DlI~ss~~l---~hw~~d-------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|+|+|.... .++..+ ...++.++.++|||||.|++..+
T Consensus 93 D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 93 DDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 999986421 111111 13678899999999999999865
No 181
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.94 E-value=2.6e-09 Score=102.57 Aligned_cols=97 Identities=11% Similarity=0.118 Sum_probs=71.1
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CCCCCCCeeEEEec
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYPSQAFDLIHCS 345 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LPfp~~sFDlI~ss 345 (572)
+..+|||||||+|..+..|+.. +|+++|+++.++..+..... ..+.. ..+...|... ++..++ ||+|++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH-DNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 3578999999999999888754 79999999988866654433 33332 2344444433 354456 9999986
Q ss_pred cccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 346 ~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.. ..+...++.++.++|||||++++..
T Consensus 134 ~~----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 32 3566899999999999999999875
No 182
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.94 E-value=2.5e-09 Score=107.98 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=75.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCCCCCeeEEEeccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
.+..+|||+|||+|.++..++.. +|+++|+++.++..++. .+...++. ..+...|...++. .++||+|++...
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~-n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE-NIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYV 195 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH-HHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEECChHHcCc-cCCceEEEECCc
Confidence 35689999999999999888764 79999999998866654 34444543 3455556666644 578999998755
Q ss_pred cccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 348 RINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 348 l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. +...++.++.++|||||.+++++.
T Consensus 196 ~-----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 196 H-----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp S-----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred c-----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 2 557899999999999999999975
No 183
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.94 E-value=7.7e-10 Score=109.44 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=68.8
Q ss_pred CCEEEEECCCCchhHHHhcc--------CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC---CCCCC-CCeeEE
Q 008262 275 IRVVMDAGCGVASFGAYLLP--------RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR---LPYPS-QAFDLI 342 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~--------~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~---LPfp~-~sFDlI 342 (572)
..+|||||||+|..+..|++ .+|+++|+++.++..++ .......+...|... +++.. .+||+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 47999999999998887754 37999999999874332 222234455556655 35433 479999
Q ss_pred EeccccccccCChHHHHHHHHH-hccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNR-MLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~R-vLKPGG~lv~st 376 (572)
++... | .+...+|.++.| +|||||+|++..
T Consensus 157 ~~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 157 FIDNA--H--ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEESS--C--SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 98643 3 366889999998 999999999975
No 184
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.94 E-value=3.6e-09 Score=107.12 Aligned_cols=118 Identities=14% Similarity=0.092 Sum_probs=77.8
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeC-CccchHHHHHHHH----HHcCC-----
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSI-APKDVHENQIQFA----LERGA----- 320 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDi-Sp~dl~~a~~~~A----~~rg~----- 320 (572)
+.....+.+.+... ..+..+|||||||+|.++..++.. +|+++|+ ++.++..++.+.. ...+.
T Consensus 63 ~~~~l~~~l~~~~~----~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 63 GARALADTLCWQPE----LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp HHHHHHHHHHHCGG----GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHHhcch----hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCC
Confidence 34445555555443 134579999999999998887764 7999999 8888866654431 22222
Q ss_pred -CcEEEeccc----cCCC--CCCCCeeEEEeccccccccCChHHHHHHHHHhcc---C--CeEEEEEE
Q 008262 321 -PAMVAAFAT----RRLP--YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLR---A--GGYFAWAA 376 (572)
Q Consensus 321 -~~~~~~~d~----e~LP--fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLK---P--GG~lv~st 376 (572)
...+...+. ..+. +++++||+|+++.++++. .+...++.++.++|| | ||.+++..
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~-~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFH-QAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCG-GGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred CCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccCh-HHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 122222221 1111 035789999998886654 777899999999999 9 99887764
No 185
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.94 E-value=1.4e-09 Score=118.79 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=80.8
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR 331 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~ 331 (572)
.+.+.+.+.+. ..+..+|||||||+|.++..+++. +|+++|+++ ++..++ +.+...++. ..+...+.+.
T Consensus 145 ~~~~~il~~l~----~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~ 218 (480)
T 3b3j_A 145 TYQRAILQNHT----DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEE 218 (480)
T ss_dssp HHHHHHHHTGG----GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHHhhh----hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhh
Confidence 44555555554 235679999999999999888765 799999998 774443 444445542 3455567777
Q ss_pred CCCCCCCeeEEEeccccccccCC-hHHHHHHHHHhccCCeEEEEE
Q 008262 332 LPYPSQAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~hw~~d-~~~~L~ei~RvLKPGG~lv~s 375 (572)
++++ ++||+|+|..+..++..+ ....+.++.++|||||++++.
T Consensus 219 ~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 219 VSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7765 689999998766666433 356788999999999999864
No 186
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.93 E-value=1.4e-09 Score=105.05 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=71.1
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccc-cCCCC-C----CCCee
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT-RRLPY-P----SQAFD 340 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~-e~LPf-p----~~sFD 340 (572)
+..+|||||||+|.++..|+.. +|+++|+++.++..++... ...+.. ..+...+. +.++. . .++||
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYW-EKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH-HHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 3578999999999999888764 7999999998886665433 334443 33444444 22221 1 17899
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|++.. +..+...++.++.++|||||++++..
T Consensus 143 ~v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 143 LIYIDA----DKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECC----CHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999653 23455789999999999999999985
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.92 E-value=5.2e-09 Score=109.20 Aligned_cols=116 Identities=16% Similarity=0.049 Sum_probs=83.1
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCC-cEEEecccc
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATR 330 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e 330 (572)
..+..+..+.. ..+..+|||+|||+|.++..++. ..|+|+|+++.++..++.+ +...++. ..+...|..
T Consensus 190 ~la~~l~~~~~----~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n-~~~~g~~~i~~~~~D~~ 264 (354)
T 3tma_A 190 VLAQALLRLAD----ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREA-ALASGLSWIRFLRADAR 264 (354)
T ss_dssp HHHHHHHHHTT----CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHH-HHHTTCTTCEEEECCGG
T ss_pred HHHHHHHHHhC----CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHH-HHHcCCCceEEEeCChh
Confidence 34444544443 24567899999999998877765 4899999999998766543 4445543 456666788
Q ss_pred CCCCCCCCeeEEEeccccccccCC-------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRD-------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d-------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.++.+.+.||+|+|+........+ ...++.++.++|||||.+++.+.
T Consensus 265 ~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 265 HLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred hCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 888777889999997543221111 25789999999999999999974
No 188
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.91 E-value=2.4e-09 Score=103.85 Aligned_cols=111 Identities=14% Similarity=0.107 Sum_probs=73.1
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL- 332 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L- 332 (572)
...+...+..+ ...+..+|||+|||+|.++..|++ ..|+++|+++.++..+. +.+... ....+...|....
T Consensus 59 ~~~i~~~l~~~-~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~-~~~~~~-~~v~~~~~d~~~~~ 135 (227)
T 1g8a_A 59 GAAIMNGLKNF-PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV-PIVEER-RNIVPILGDATKPE 135 (227)
T ss_dssp HHHHHTTCCCC-CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHSSC-TTEEEEECCTTCGG
T ss_pred HHHHHhhHHhc-CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHH-HHHhcc-CCCEEEEccCCCcc
Confidence 34454334322 124567999999999999888874 37999999998775443 233322 2334444555442
Q ss_pred --CCCCCCeeEEEeccccccccCChH-HHHHHHHHhccCCeEEEEEE
Q 008262 333 --PYPSQAFDLIHCSRCRINWTRDDG-ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 333 --Pfp~~sFDlI~ss~~l~hw~~d~~-~~L~ei~RvLKPGG~lv~st 376 (572)
....++||+|++... ..+.. .++.++.++|||||++++..
T Consensus 136 ~~~~~~~~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 136 EYRALVPKVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp GGTTTCCCEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcccCCceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 112368999997643 23333 55999999999999999974
No 189
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.91 E-value=1.5e-09 Score=110.23 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=67.0
Q ss_pred CCCEEEEECCCCc--hhHHHhc-----cCCeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCC----CC--CCCe
Q 008262 274 HIRVVMDAGCGVA--SFGAYLL-----PRNVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLP----YP--SQAF 339 (572)
Q Consensus 274 ~~~~VLDIGCGtG--~~a~~L~-----~~~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LP----fp--~~sF 339 (572)
..++|||||||++ ..+..++ +.+|+++|.|+.|+..++..... ... ...+...|+.+++ .+ .++|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~-~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS-TPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC-CSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc-CCCCcEEEEEecccChhhhhccccccccc
Confidence 4588999999973 2223322 23899999999999665433321 111 2345555665542 11 3456
Q ss_pred e-----EEEeccccccccCCh---HHHHHHHHHhccCCeEEEEEEC
Q 008262 340 D-----LIHCSRCRINWTRDD---GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 340 D-----lI~ss~~l~hw~~d~---~~~L~ei~RvLKPGG~lv~st~ 377 (572)
| .|+++.+ +||..+. ..++.++.+.|+|||+|+++..
T Consensus 157 D~~~p~av~~~av-LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 157 DLTRPVALTVIAI-VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp CTTSCCEEEEESC-GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred CcCCcchHHhhhh-HhcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 5 4666655 6666663 5899999999999999999975
No 190
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.91 E-value=7.4e-09 Score=101.23 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=73.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.+..+|||+|||+|.++..+++. +|+++|+++.++..+....+ ..++ ...+...|.....+++++||+|++..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLK-KFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-- 166 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHH-HTTCCTTEEEECSCTTTSCCCTTCBSEEEECS--
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCCcEEEEEcChhhcccCCCcccEEEECC--
Confidence 45689999999999998888763 89999999988866554333 3343 23344445554433567899999742
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.++..++.++.++|||||.+++..+
T Consensus 167 ----~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 167 ----REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ----SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4667899999999999999999974
No 191
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.91 E-value=2.8e-09 Score=109.86 Aligned_cols=100 Identities=20% Similarity=0.161 Sum_probs=66.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC-CeEEEeC----CccchHHHHHHHHHHcCCC-cEEEec-cccCCCCCCCCeeEEEec
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-NVITMSI----APKDVHENQIQFALERGAP-AMVAAF-ATRRLPYPSQAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-~V~gvDi----Sp~dl~~a~~~~A~~rg~~-~~~~~~-d~e~LPfp~~sFDlI~ss 345 (572)
.++.+|||||||+|.++..++++ .|+|+|+ ++.++... .....+.+ ..+... |...+ +.++||+|+|.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~D~~~l--~~~~fD~V~sd 155 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPI---PMSTYGWNLVRLQSGVDVFFI--PPERCDTLLCD 155 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC---CCCSTTGGGEEEECSCCTTTS--CCCCCSEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHH---HhhhcCCCCeEEEeccccccC--CcCCCCEEEEC
Confidence 45689999999999999999886 7999999 44333100 00111112 233333 44444 45799999997
Q ss_pred cccc--cccCChH---HHHHHHHHhccCCeEEEEEEC
Q 008262 346 RCRI--NWTRDDG---ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~l~--hw~~d~~---~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+.. ++..+.. .+|.++.++|||||.|++..+
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 5532 3322322 578999999999999999764
No 192
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.90 E-value=7.8e-09 Score=105.80 Aligned_cols=120 Identities=10% Similarity=0.028 Sum_probs=77.2
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-c---CCCcEEEeccccC-CCCCCCCeeEEEe
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-R---GAPAMVAAFATRR-LPYPSQAFDLIHC 344 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-r---g~~~~~~~~d~e~-LPfp~~sFDlI~s 344 (572)
...+|||||||+|.++..+++. +|+++|+++.++..++..+... . .....+...|... ++..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4589999999999999999865 6999999998886655443221 1 1223344444332 3444678999998
Q ss_pred ccccccccC-----ChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHH
Q 008262 345 SRCRINWTR-----DDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEML 394 (572)
Q Consensus 345 s~~l~hw~~-----d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e 394 (572)
... .+|.. ....+++++.++|||||.|++.+........++......+.
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 223 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRIS 223 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHH
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHH
Confidence 633 33211 12689999999999999999985322233444444444443
No 193
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.90 E-value=7.5e-10 Score=123.23 Aligned_cols=101 Identities=13% Similarity=0.060 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcC-CCcEEEeccccCC--CCCCCCeeEEEecccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG-APAMVAAFATRRL--PYPSQAFDLIHCSRCR 348 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg-~~~~~~~~d~e~L--Pfp~~sFDlI~ss~~l 348 (572)
.+.+|||||||.|.++..|++. +|+|+|+++.++..++ ..|.+.+ ....+...+++++ .+.+++||+|+|..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCR-ALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHH-HHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 4579999999999999999987 8999999999886665 3455555 4455666667777 4677899999999998
Q ss_pred ccccCChH--HHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDG--ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~--~~L~ei~RvLKPGG~lv~st 376 (572)
+|. .++. ..+..+.+.|+++|..++.+
T Consensus 145 ehv-~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 145 HHI-VHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHH-HHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred hcC-CCHHHHHHHHHHHHHhccccceeeEE
Confidence 888 4543 44556777788888766664
No 194
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.89 E-value=1.3e-09 Score=113.45 Aligned_cols=93 Identities=14% Similarity=0.169 Sum_probs=70.7
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
...+|||||||+|.++..++++ +++++|+ +.++. .+++.. ...+...|... +++. ||+|++..+++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~~-~v~~~~~d~~~-~~p~--~D~v~~~~~lh 257 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVE-----NLSGSN-NLTYVGGDMFT-SIPN--ADAVLLKYILH 257 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHT-----TCCCBT-TEEEEECCTTT-CCCC--CSEEEEESCGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHh-----hcccCC-CcEEEeccccC-CCCC--ccEEEeehhhc
Confidence 4579999999999999988754 6999999 76653 232221 23344455544 5553 99999999988
Q ss_pred cccCChH--HHHHHHHHhccC---CeEEEEEEC
Q 008262 350 NWTRDDG--ILLLEVNRMLRA---GGYFAWAAQ 377 (572)
Q Consensus 350 hw~~d~~--~~L~ei~RvLKP---GG~lv~st~ 377 (572)
|| .+.. .+|++++|+||| ||++++.+.
T Consensus 258 ~~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 258 NW-TDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp GS-CHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred cC-CHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 88 5555 999999999999 999999864
No 195
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.89 E-value=4.3e-09 Score=101.72 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=70.5
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CC-CC---CCCeeE
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LP-YP---SQAFDL 341 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LP-fp---~~sFDl 341 (572)
+..+|||||||+|.++..|++. +|+++|+++.++..++... ...+.. ..+...|... ++ +. .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNI-ERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 4579999999999999888765 7999999998886665433 334443 3344444422 22 11 267999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|++... ......++.++.++|||||++++..
T Consensus 137 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 137 IFIDAD----KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEECSC----GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 997644 2344789999999999999998875
No 196
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.88 E-value=2.2e-09 Score=104.77 Aligned_cols=98 Identities=9% Similarity=0.096 Sum_probs=71.9
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CCCC--CCCeeEEEe
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYP--SQAFDLIHC 344 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LPfp--~~sFDlI~s 344 (572)
+..+|||||||+|.++..|++. +|+++|+++.++..+..... ..+.. ..+...|... ++.. +++||+|++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVK-ALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH-HTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 4579999999999988887753 79999999988866554333 33442 3344445444 2432 578999998
Q ss_pred ccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.... .+...++.++.++|||||.+++.+
T Consensus 133 ~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAK----GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGG----SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 6542 466899999999999999999985
No 197
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.88 E-value=7e-09 Score=105.06 Aligned_cols=121 Identities=11% Similarity=0.060 Sum_probs=80.1
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-cC---CCcEEEeccccC-CCCCCCCeeEEEe
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RG---APAMVAAFATRR-LPYPSQAFDLIHC 344 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-rg---~~~~~~~~d~e~-LPfp~~sFDlI~s 344 (572)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+... .+ ....+...|... ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5689999999999999998865 6999999998886655433221 11 123344444432 3444678999998
Q ss_pred ccccccccCC----hHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHh
Q 008262 345 SRCRINWTRD----DGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLD 395 (572)
Q Consensus 345 s~~l~hw~~d----~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~ 395 (572)
... .++... ...+++++.++|||||.+++.........+.+......+..
T Consensus 155 d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 208 (275)
T 1iy9_A 155 DST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKE 208 (275)
T ss_dssp SCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHT
T ss_pred CCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHH
Confidence 643 343221 25899999999999999999853222334444444444433
No 198
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.87 E-value=5.1e-09 Score=108.05 Aligned_cols=104 Identities=13% Similarity=0.167 Sum_probs=73.6
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPfp~~sFDlI~ss~ 346 (572)
.++.+|||+|||+|..+..|++. .|+++|+++.++..+..+. ...+.. ..+...|...++..+++||+|++..
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~-~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNL-SRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHH-HHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHH-HHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 45689999999999988888742 6999999998886655433 334553 3455556666654567899999742
Q ss_pred c---cccccCCh------------------HHHHHHHHHhccCCeEEEEEEC
Q 008262 347 C---RINWTRDD------------------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~---l~hw~~d~------------------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. ...+..++ ..+|.++.++|||||++++++.
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 1 01111111 4889999999999999999874
No 199
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.87 E-value=1e-08 Score=105.55 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=71.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-c---CCCcEEEeccccC-CCCCCCCeeEEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-R---GAPAMVAAFATRR-LPYPSQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-r---g~~~~~~~~d~e~-LPfp~~sFDlI~ 343 (572)
....+|||||||+|.++..+++. +|+++|+++.++..++..+... . .....+...|... ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 35689999999999999999875 6999999998886665443321 1 2223344444433 444568999999
Q ss_pred eccccccccCC----hHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRD----DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d----~~~~L~ei~RvLKPGG~lv~st 376 (572)
+... .++... ...+++++.++|||||.+++..
T Consensus 174 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 8643 443221 2478999999999999999986
No 200
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.87 E-value=8.5e-10 Score=109.10 Aligned_cols=101 Identities=11% Similarity=0.164 Sum_probs=66.4
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCC---CCC---CCCeeE
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL---PYP---SQAFDL 341 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~L---Pfp---~~sFDl 341 (572)
+..+|||+|||+|.++..++.+ +|+|+|+++.++..++... ...++. ..+...|.+.. +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNV-EQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 4679999999999988777643 7999999999987666443 334443 34455555441 344 268999
Q ss_pred EEeccccccccC--------------ChHHHHHHHHHhccCCeEEEEE
Q 008262 342 IHCSRCRINWTR--------------DDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 342 I~ss~~l~hw~~--------------d~~~~L~ei~RvLKPGG~lv~s 375 (572)
|+|+...++... ....++.+++|+|||||.+.+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 999865443320 1124678899999999998765
No 201
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.87 E-value=5.6e-09 Score=108.78 Aligned_cols=118 Identities=8% Similarity=-0.040 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC---cEEEeccc
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP---AMVAAFAT 329 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~---~~~~~~d~ 329 (572)
+....+.+.+.+.. ..+..+|||+|||+|.++..++.. +|+++|+++.++..+..+... .++. ..+...|+
T Consensus 137 q~~~~~~l~~~~~~---~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~-~gl~~~~v~~i~~D~ 212 (332)
T 2igt_A 137 QIVHWEWLKNAVET---ADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVL-AGLEQAPIRWICEDA 212 (332)
T ss_dssp GHHHHHHHHHHHHH---SSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH-HTCTTSCEEEECSCH
T ss_pred HHHHHHHHHHHHHh---cCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECcH
Confidence 33334444444431 134579999999999999988865 799999999988766644433 3443 34444554
Q ss_pred cCCCC----CCCCeeEEEecccc---------ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 330 RRLPY----PSQAFDLIHCSRCR---------INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 330 e~LPf----p~~sFDlI~ss~~l---------~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
..+.. ..++||+|++.... .++..+...++.++.++|||||+|++..
T Consensus 213 ~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 213 MKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp HHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred HHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 44321 14689999985432 1233345689999999999999988875
No 202
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.87 E-value=5.7e-09 Score=107.97 Aligned_cols=102 Identities=12% Similarity=0.014 Sum_probs=67.6
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH----cCCCcEEEeccccC-CCCCCCCeeEEEe
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE----RGAPAMVAAFATRR-LPYPSQAFDLIHC 344 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~----rg~~~~~~~~d~e~-LPfp~~sFDlI~s 344 (572)
...+|||||||+|.++..+++. +|+++|+++.++..++..+... ......+...|... ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4589999999999999999865 7999999998875554332210 01123344444432 3335678999998
Q ss_pred ccccccccCCh----HHHHHHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRDD----GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d~----~~~L~ei~RvLKPGG~lv~st 376 (572)
... .++.... ..+++++.++|||||.+++..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 643 4443222 588999999999999999985
No 203
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.87 E-value=1.5e-09 Score=107.85 Aligned_cols=98 Identities=13% Similarity=0.009 Sum_probs=71.5
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CCCC-----CCCee
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYP-----SQAFD 340 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LPfp-----~~sFD 340 (572)
+..+|||||||+|..+..|++. +|+++|+++.++..++.. +...+.. ..+...|... ++.. +++||
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPY-WREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHH-HHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3579999999999998888763 799999999988655543 3334443 3444445433 3321 47899
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|++... ..+...++.++.++|||||++++..
T Consensus 139 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 139 FIFIDAD----KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEEESC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCC----hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 9997643 3455789999999999999999975
No 204
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=3.4e-09 Score=109.86 Aligned_cols=101 Identities=12% Similarity=0.153 Sum_probs=69.5
Q ss_pred CEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC--CCCCCCeeEEEeccccc
Q 008262 276 RVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL--PYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L--Pfp~~sFDlI~ss~~l~ 349 (572)
.+|||||||+|.++..+++. +|+++|+++.++..++..+.........+...|...+ .+++++||+|++... .
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~-~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF-A 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-T
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-C
Confidence 49999999999999998872 7999999998774443322111112233444454332 245689999998643 3
Q ss_pred cccCC----hHHHHHHHHHhccCCeEEEEEEC
Q 008262 350 NWTRD----DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 350 hw~~d----~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++... ...++++++|+|||||.|++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 33211 25899999999999999999863
No 205
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.86 E-value=7.3e-09 Score=104.04 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=72.4
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEec
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss 345 (572)
.+..+|||+|||+|.++..++.. +|+++|+++.++..+.... ...++ ...+...|.... +++++||+|++.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNL-TKWGLIERVTIKVRDISEG-FDEKDVDALFLD 188 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHH-HHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH-HHcCCCCCEEEEECCHHHc-ccCCccCEEEEC
Confidence 45679999999999988877643 7999999998886655433 33343 233444455554 666789999974
Q ss_pred cccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. +++..++.++.++|||||.+++.+.
T Consensus 189 ~------~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 189 V------PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp C------SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred C------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 4567899999999999999999874
No 206
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.85 E-value=5.2e-09 Score=108.48 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=77.4
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-c---CCCcEEEeccccC-CCCCCCCeeEEEe
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-R---GAPAMVAAFATRR-LPYPSQAFDLIHC 344 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-r---g~~~~~~~~d~e~-LPfp~~sFDlI~s 344 (572)
+..+|||||||+|.++..+++. +|+++|+++.++..++..+... . .....+...|... ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4589999999999999998865 6999999998875554332210 0 1123344444332 3333578999998
Q ss_pred ccccccccCC--h--HHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHH
Q 008262 345 SRCRINWTRD--D--GILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEM 393 (572)
Q Consensus 345 s~~l~hw~~d--~--~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~ 393 (572)
... .++... . ..+++++.++|||||.+++.........+.+......+
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 247 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYA 247 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHH
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHH
Confidence 643 333211 1 68999999999999999998632333444444444343
No 207
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.85 E-value=8.6e-09 Score=104.73 Aligned_cols=104 Identities=14% Similarity=0.126 Sum_probs=71.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH----cCCCcEEEeccccC-CCCCCCCeeEEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE----RGAPAMVAAFATRR-LPYPSQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~----rg~~~~~~~~d~e~-LPfp~~sFDlI~ 343 (572)
.++.+|||||||+|.++..+++. +|+++|+++.++..++..+... ......+...|... ++..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 35689999999999999999865 7999999998775444322110 01223344444433 232367899999
Q ss_pred eccccccccCCh----HHHHHHHHHhccCCeEEEEEEC
Q 008262 344 CSRCRINWTRDD----GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 344 ss~~l~hw~~d~----~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+... .++.... ..+++++.++|||||.+++...
T Consensus 157 ~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 8643 3432221 5899999999999999999853
No 208
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.85 E-value=6.9e-09 Score=107.08 Aligned_cols=103 Identities=15% Similarity=0.108 Sum_probs=74.0
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-cC----CCcEEEeccccC-CCCCCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RG----APAMVAAFATRR-LPYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-rg----~~~~~~~~d~e~-LPfp~~sFDlI 342 (572)
....+|||||||+|.++..+++. +|+++|+++.++..++..+... .+ ....+...|... ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 35689999999999999999875 6999999998886665443321 11 223444445433 34446899999
Q ss_pred Eeccccccc---cC--C--hHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINW---TR--D--DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw---~~--d--~~~~L~ei~RvLKPGG~lv~st 376 (572)
++... .++ .. . ...+++++.++|||||.|++..
T Consensus 156 i~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 98754 454 11 1 2689999999999999999975
No 209
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.85 E-value=7.9e-09 Score=101.39 Aligned_cols=98 Identities=9% Similarity=0.128 Sum_probs=69.6
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CC------------
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LP------------ 333 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LP------------ 333 (572)
+..+|||||||+|.++..++.. +|+++|+++.++..++... ...+.. ..+...|... ++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW-KENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4578999999999988887643 7999999998876655433 333443 2333333322 22
Q ss_pred --CCC--CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 334 --YPS--QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 334 --fp~--~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|++ ++||+|++... ..+...++.++.++|||||++++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999998643 2344689999999999999999985
No 210
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.83 E-value=1.1e-08 Score=108.28 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEeccc-
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRC- 347 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~~- 347 (572)
++++|||||||+|.++...++. +|+++|.++ ++..+ .+.++..+.. ..+...+++.+.++ +.||+|+|..+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a-~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQA-REVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMG 159 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHH-HHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCB
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHH-HHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccc
Confidence 4578999999999988776654 799999986 65444 3556666654 34555677888776 68999998432
Q ss_pred -cccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 348 -RINWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 348 -l~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
.+........++....|.|||||.++-+
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccchhhhHHHHHHhhCCCCceECCc
Confidence 2223234578888999999999998754
No 211
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.82 E-value=6.7e-09 Score=103.34 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=70.6
Q ss_pred CCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CCC------CCCCe
Q 008262 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPY------PSQAF 339 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LPf------p~~sF 339 (572)
+..+|||||||+|..+..|+. .+|+++|+++.++..++..+ ...+.. ..+...+... ++. ++++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVI-KKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 357999999999998887764 37999999998886665433 334442 2344444432 332 25789
Q ss_pred eEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 340 DLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 340 DlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+|++... ..+...++.++.++|||||++++..
T Consensus 158 D~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998633 3456899999999999999999874
No 212
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.80 E-value=3.7e-08 Score=93.62 Aligned_cols=93 Identities=12% Similarity=0.033 Sum_probs=64.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
.+..+|||+|||+|.++..++.. .|+|+|+++.++..+. ++-....+...|...++ ++||+|+++..++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~-----~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAK-----RNCGGVNFMVADVSEIS---GKYDTWIMNPPFG 121 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHH-----HHCTTSEEEECCGGGCC---CCEEEEEECCCC-
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHH-----HhcCCCEEEECcHHHCC---CCeeEEEECCCch
Confidence 35679999999999999888765 5999999998774443 22113445555666664 7899999998866
Q ss_pred cccCC-hHHHHHHHHHhccCCeEEEEEE
Q 008262 350 NWTRD-DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 350 hw~~d-~~~~L~ei~RvLKPGG~lv~st 376 (572)
++... ...++.++.++| |+ +++..
T Consensus 122 ~~~~~~~~~~l~~~~~~~--g~-~~~~~ 146 (200)
T 1ne2_A 122 SVVKHSDRAFIDKAFETS--MW-IYSIG 146 (200)
T ss_dssp ------CHHHHHHHHHHE--EE-EEEEE
T ss_pred hccCchhHHHHHHHHHhc--Cc-EEEEE
Confidence 66432 247899999999 55 44443
No 213
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.80 E-value=1.3e-08 Score=99.78 Aligned_cols=98 Identities=15% Similarity=0.146 Sum_probs=70.6
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccc----cCCCCCC--CCee
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT----RRLPYPS--QAFD 340 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~----e~LPfp~--~sFD 340 (572)
+..+|||||||+|..+..|+.. +|+++|+++.++..++..+. ..+.. ..+...+. ..++..+ ++||
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ-KAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 3478999999999999888764 69999999988866554333 33442 23333342 2233334 7899
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|++... ..+...++.++.++|||||++++..
T Consensus 151 ~V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 151 LIFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEECSC----GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9997643 2455789999999999999999975
No 214
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.80 E-value=9.8e-09 Score=103.53 Aligned_cols=104 Identities=11% Similarity=0.064 Sum_probs=74.3
Q ss_pred CCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCC----CCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPY----PSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPf----p~~sFDlI 342 (572)
.++.+|||+|||+|..+..+++ ..|+++|+++.++..+.. .+...+.. ..+...|...++. ..++||+|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKS-NINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHH-HHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 4567999999999999888775 379999999988865543 33444553 3444456555543 25789999
Q ss_pred Eecccccc-----------------ccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 343 HCSRCRIN-----------------WTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 343 ~ss~~l~h-----------------w~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
++...... .......+|.++.++|||||.+++++.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 98632111 113446899999999999999999974
No 215
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.80 E-value=1.6e-08 Score=105.84 Aligned_cols=101 Identities=17% Similarity=0.237 Sum_probs=69.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCCCCCCCeeEEEeccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
....+|||||||+|.++..++++ +++..|+ |..+..+....+ ..+. ...+...|....|.+ .+|+|++..+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~-~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~v 253 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFS-FQEEEQIDFQEGDFFKDPLP--EADLYILARV 253 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSC-C--CCSEEEEESCTTTSCCC--CCSEEEEESS
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhh-hcccCceeeecCccccCCCC--CceEEEeeee
Confidence 34579999999999999999876 5666776 434433321111 1122 234445565544544 4799999999
Q ss_pred cccccCCh-HHHHHHHHHhccCCeEEEEEEC
Q 008262 348 RINWTRDD-GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 348 l~hw~~d~-~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++|.++. ..+|++++++|+|||.+++.+.
T Consensus 254 lh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 254 LHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp GGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 99994332 4789999999999999999874
No 216
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.79 E-value=9.5e-09 Score=104.25 Aligned_cols=117 Identities=17% Similarity=0.126 Sum_probs=75.6
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHH-----------cCCCcEEEeccccC-CCCCCCC
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALE-----------RGAPAMVAAFATRR-LPYPSQA 338 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~-----------rg~~~~~~~~d~e~-LPfp~~s 338 (572)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+ .. ......+...|... ++. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 4689999999999999998865 7999999998886555433 10 11122344444322 222 578
Q ss_pred eeEEEeccccccccCC----hHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHH
Q 008262 339 FDLIHCSRCRINWTRD----DGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEM 393 (572)
Q Consensus 339 FDlI~ss~~l~hw~~d----~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~ 393 (572)
||+|++... .++... ...+++++.++|||||.+++...........++.....+
T Consensus 153 fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l 210 (281)
T 1mjf_A 153 FDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEM 210 (281)
T ss_dssp EEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHH
T ss_pred eeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHH
Confidence 999998644 343221 257899999999999999997532223334334433333
No 217
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.77 E-value=3.1e-08 Score=99.75 Aligned_cols=94 Identities=17% Similarity=0.103 Sum_probs=67.1
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHH---H-cCCCcEEEeccccCCCCCCCCeeEEEeccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFAL---E-RGAPAMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~---~-rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
.+++|||||||+|.++..++.. +|+++|+++.++..+...+.. . ......+...|..... ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 4589999999999999888764 799999999877444321110 0 1122334444544433 7899999862
Q ss_pred cccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 348 RINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 348 l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.++..+++++.++|||||.+++..
T Consensus 148 -----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 455669999999999999999974
No 218
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.77 E-value=3.4e-08 Score=105.22 Aligned_cols=114 Identities=13% Similarity=-0.006 Sum_probs=77.7
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-CCCCCCeeEEEecccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-PYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-Pfp~~sFDlI~ss~~l~h 350 (572)
++.+|||+|||+|.++..++.. .|+++|+|+.++..+..+. ...++...+...|+..+ +...+.||+|++....+.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~-~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAA-LRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHH-HHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 4689999999999999988765 6999999999987666443 34455544445554432 222344999998754322
Q ss_pred c--------cCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 008262 351 W--------TRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (572)
Q Consensus 351 w--------~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~ 388 (572)
. ..+...++.++.++|||||+|++.+........++.+
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~ 338 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLE 338 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHH
Confidence 1 1233478999999999999999776433444444333
No 219
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.76 E-value=1.6e-08 Score=97.82 Aligned_cols=98 Identities=13% Similarity=0.092 Sum_probs=70.1
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCC-C-CC----CCCee
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRL-P-YP----SQAFD 340 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~L-P-fp----~~sFD 340 (572)
+..+|||||||+|.++..++.. +|+++|+++.++..+.... ...+. ...+...|.... + +. .++||
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLW-RQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4579999999999999888763 7999999998886665433 33444 233444443221 1 11 16899
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|++... ..+...++.++.++|||||.+++..
T Consensus 148 ~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 148 VAVVDAD----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEECSC----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9998643 2445789999999999999999974
No 220
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.75 E-value=2.8e-08 Score=101.03 Aligned_cols=116 Identities=16% Similarity=0.215 Sum_probs=78.4
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEecc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d 328 (572)
..+..++.+.+.+.. .+..+|||+|||+|.++..++.. +|+++|+|+.++..+..+ +...++. ..+...|
T Consensus 107 ~te~lv~~~l~~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n-~~~~~l~~~v~~~~~D 181 (284)
T 1nv8_A 107 ETEELVELALELIRK----YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKN-AERHGVSDRFFVRKGE 181 (284)
T ss_dssp THHHHHHHHHHHHHH----HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHH-HHHTTCTTSEEEEESS
T ss_pred hHHHHHHHHHHHhcc----cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECc
Confidence 455666666665541 23468999999999988887653 799999999988666543 3444553 3444445
Q ss_pred ccCCCCCCCCe---eEEEecccccccc------------------CChHHHHHHHH-HhccCCeEEEEEE
Q 008262 329 TRRLPYPSQAF---DLIHCSRCRINWT------------------RDDGILLLEVN-RMLRAGGYFAWAA 376 (572)
Q Consensus 329 ~e~LPfp~~sF---DlI~ss~~l~hw~------------------~d~~~~L~ei~-RvLKPGG~lv~st 376 (572)
... +++ ++| |+|+|+...+... .+...+++++. +.|+|||+|++..
T Consensus 182 ~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 182 FLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp TTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred chh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 443 222 578 9999973222110 11227899999 9999999999974
No 221
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.74 E-value=6.7e-09 Score=108.37 Aligned_cols=93 Identities=12% Similarity=0.147 Sum_probs=69.5
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
...+|||||||+|.++..++++ +++++|+ +.++. .+++. ....+...|... +++ .||+|+++.+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVG-----NLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLH 262 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHS-----SCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHh-----hcccC-CCcEEEeCccCC-CCC--CceEEEEccccc
Confidence 4579999999999999988765 6888898 55442 22221 123344455555 665 499999999988
Q ss_pred cccCChH--HHHHHHHHhccC---CeEEEEEEC
Q 008262 350 NWTRDDG--ILLLEVNRMLRA---GGYFAWAAQ 377 (572)
Q Consensus 350 hw~~d~~--~~L~ei~RvLKP---GG~lv~st~ 377 (572)
+| .+.. .+|++++++||| ||++++.+.
T Consensus 263 ~~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 263 DW-NDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp GS-CHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred CC-CHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 88 5655 999999999999 999999864
No 222
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.73 E-value=2.1e-08 Score=102.76 Aligned_cols=88 Identities=22% Similarity=0.291 Sum_probs=59.7
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP 333 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LP 333 (572)
..++.+.+.+. ..+..+|||||||+|.++..|+++ +|+|+|+++.++..+..... ..+.. ..+...|...++
T Consensus 29 ~i~~~i~~~~~----~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~-~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 29 GILDKIIYAAK----IKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCL-YEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHC----CCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEC----CCSSC
T ss_pred HHHHHHHHhcC----CCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEECchhhCC
Confidence 34556666554 245689999999999999999986 79999999998866654333 33433 334445666666
Q ss_pred CCCCCeeEEEecccccccc
Q 008262 334 YPSQAFDLIHCSRCRINWT 352 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~ 352 (572)
+ .+||+|+++.. .+|.
T Consensus 104 ~--~~~D~Vv~n~p-y~~~ 119 (299)
T 2h1r_A 104 F--PKFDVCTANIP-YKIS 119 (299)
T ss_dssp C--CCCSEEEEECC-GGGH
T ss_pred c--ccCCEEEEcCC-cccc
Confidence 5 48999998754 5553
No 223
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.73 E-value=3.6e-08 Score=104.54 Aligned_cols=111 Identities=9% Similarity=0.021 Sum_probs=76.1
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC---cEEEeccccC-CCC---CCCCeeEEE
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRR-LPY---PSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~---~~~~~~d~e~-LPf---p~~sFDlI~ 343 (572)
+..+|||+|||+|.++..++.. +|+++|+++.++..+..+ +...++. ..+...|+.. ++. ..++||+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N-~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAH-FEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHH-HHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 3578999999999999988874 799999999998766643 4445543 3455555433 321 245899999
Q ss_pred eccccc----cccCC----hHHHHHHHHHhccCCeEEEEEECCCCCCHHH
Q 008262 344 CSRCRI----NWTRD----DGILLLEVNRMLRAGGYFAWAAQPVYKHEEA 385 (572)
Q Consensus 344 ss~~l~----hw~~d----~~~~L~ei~RvLKPGG~lv~st~P~~~tl~E 385 (572)
+..... ....+ ...++.++.++|+|||++++++.+......+
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~ 340 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQ 340 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHH
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHH
Confidence 864432 12222 2357788899999999999998544333333
No 224
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.72 E-value=6.6e-08 Score=101.85 Aligned_cols=106 Identities=12% Similarity=-0.006 Sum_probs=76.0
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccC-CCC-CCCCeeEEEecc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRR-LPY-PSQAFDLIHCSR 346 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~-LPf-p~~sFDlI~ss~ 346 (572)
++.+|||+| |+|.++..++.. +|+++|+++.++..++.+ +...++ ...+...|... +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~-~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKA-ANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHH-HHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 468999999 999998887643 799999999988666543 334455 34455567666 764 457899999986
Q ss_pred ccccccCChHHHHHHHHHhccCCe-EEEEEECCCCCCH
Q 008262 347 CRINWTRDDGILLLEVNRMLRAGG-YFAWAAQPVYKHE 383 (572)
Q Consensus 347 ~l~hw~~d~~~~L~ei~RvLKPGG-~lv~st~P~~~tl 383 (572)
..... . ...++.++.++||||| .++++......+.
T Consensus 250 p~~~~-~-~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~ 285 (373)
T 2qm3_A 250 PETLE-A-IRAFVGRGIATLKGPRCAGYFGITRRESSL 285 (373)
T ss_dssp CSSHH-H-HHHHHHHHHHTBCSTTCEEEEEECTTTCCH
T ss_pred CCchH-H-HHHHHHHHHHHcccCCeEEEEEEecCcCCH
Confidence 53333 2 4789999999999999 4567753212444
No 225
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.71 E-value=2.2e-08 Score=101.77 Aligned_cols=110 Identities=17% Similarity=0.163 Sum_probs=74.1
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccC
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRR 331 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~ 331 (572)
...++.+.+.+. ..+..+|||||||+|.++..|++. +|+++|+++.++..+.... ...+. ...+...|...
T Consensus 14 ~~i~~~i~~~~~----~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 14 PLIINSIIDKAA----LRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRV-QGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHHHHTC----CCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEESCTTT
T ss_pred HHHHHHHHHhcC----CCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEEcceec
Confidence 345666776665 245689999999999999999875 8999999998885554332 22222 23455567776
Q ss_pred CCCCCCCeeEEEeccccccccCChH-HHH--------------HHH--HHhccCCeEEE
Q 008262 332 LPYPSQAFDLIHCSRCRINWTRDDG-ILL--------------LEV--NRMLRAGGYFA 373 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~hw~~d~~-~~L--------------~ei--~RvLKPGG~lv 373 (572)
++++ +||+|+++.. .+|..+.. .+| +|+ +++|||||.++
T Consensus 89 ~~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 89 TDLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ccch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 6665 7999998744 55543322 222 233 37999999873
No 226
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.70 E-value=4.3e-08 Score=105.96 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=73.6
Q ss_pred CCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCC--CCCCCeeEEEe
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP--YPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LP--fp~~sFDlI~s 344 (572)
.++.+|||+|||+|..+..+++ ..|+++|+++.++..+.. .+...+.. ..+...|...++ +++++||+|++
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKD-FVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHH-HHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 4567999999999998888775 369999999988755543 33344553 344455666665 55578999996
Q ss_pred c----c-ccccccCCh----------------HHHHHHHHHhccCCeEEEEEEC
Q 008262 345 S----R-CRINWTRDD----------------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 345 s----~-~l~hw~~d~----------------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. . ..++-.++. ..+|.++.++|||||.+++++.
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2 1 112211221 4689999999999999999974
No 227
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.69 E-value=2.2e-08 Score=98.76 Aligned_cols=98 Identities=7% Similarity=0.028 Sum_probs=70.0
Q ss_pred CCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccC-CC-C-----CCCCe
Q 008262 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LP-Y-----PSQAF 339 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~-LP-f-----p~~sF 339 (572)
+.++|||||||+|..+..+++ .+|+++|+++.++..++..+ ...+.. ..+...|... ++ + ++++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFI-RKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 357999999999998887764 37999999998886655433 334543 2333334322 22 1 25789
Q ss_pred eEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 340 DLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 340 DlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+|++.. +..+...++.++.++|||||++++..
T Consensus 149 D~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9999753 33455789999999999999999875
No 228
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.69 E-value=7.6e-08 Score=95.36 Aligned_cols=117 Identities=16% Similarity=0.087 Sum_probs=79.9
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL 332 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~L 332 (572)
++.+.++++ ++.+|||||||+|.++..++.. .|+++|+++.++..+..+. ...++. ..+...|....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~-~~~gl~~~I~~~~gD~l~~ 84 (230)
T 3lec_A 12 LQKVANYVP------KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV-SEHGLTSKIDVRLANGLSA 84 (230)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH-HHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECchhhc
Confidence 455555654 4578999999999999998875 6999999999887666444 445553 33444444443
Q ss_pred CCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 008262 333 PYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~ 388 (572)
..+.+.||+|+..++.- .-...+|.+..+.|+++|+|+++.. ....++++
T Consensus 85 ~~~~~~~D~IviaGmGg---~lI~~IL~~~~~~l~~~~~lIlqp~---~~~~~lr~ 134 (230)
T 3lec_A 85 FEEADNIDTITICGMGG---RLIADILNNDIDKLQHVKTLVLQPN---NREDDLRK 134 (230)
T ss_dssp CCGGGCCCEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEES---SCHHHHHH
T ss_pred cccccccCEEEEeCCch---HHHHHHHHHHHHHhCcCCEEEEECC---CChHHHHH
Confidence 33444799988654422 1135788899999999999999952 23444444
No 229
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.68 E-value=1.1e-07 Score=90.39 Aligned_cols=97 Identities=15% Similarity=0.051 Sum_probs=69.0
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
.+..+|||+|||+|.++..++.. .|+|+|+++.++..+... +...+....+...|...++ ++||+|+++...+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIEN-LGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-TGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH-HHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 35679999999999999988765 599999999887555432 2233444455556666664 4899999987755
Q ss_pred cccCC-hHHHHHHHHHhccCCeEEEEE
Q 008262 350 NWTRD-DGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 350 hw~~d-~~~~L~ei~RvLKPGG~lv~s 375 (572)
.+... ...++.++.++| ||.+++.
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEE
Confidence 55322 257899999999 6655443
No 230
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.68 E-value=7e-08 Score=102.41 Aligned_cols=111 Identities=13% Similarity=0.091 Sum_probs=77.6
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC-C--cEEEeccccCC-C-C--CCCCeeEEE
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-P--AMVAAFATRRL-P-Y--PSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~-~--~~~~~~d~e~L-P-f--p~~sFDlI~ 343 (572)
+..+|||+|||+|.++..++.. +|+++|+++.++..+..+ +...++ . ..+...|...+ + + ..++||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n-~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQN-VELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4579999999999999988865 799999999888666543 344555 2 34555554443 2 1 146899999
Q ss_pred eccccc--------cccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHH
Q 008262 344 CSRCRI--------NWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEA 385 (572)
Q Consensus 344 ss~~l~--------hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~E 385 (572)
+..... ....+...++.++.++|+|||++++++.+......+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 348 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDL 348 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHH
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHH
Confidence 875321 111344688999999999999999998544444333
No 231
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.67 E-value=4.4e-08 Score=105.13 Aligned_cols=104 Identities=18% Similarity=0.144 Sum_probs=74.8
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC--CCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP--YPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP--fp~~sFDlI~ss~ 346 (572)
.++.+|||+|||+|..+..+++. .|+++|+++.++..+..+ +...+....+...|...++ +++++||+|++..
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~-~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN-LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHH-HHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-HHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 45689999999999988888753 799999999988665533 3344555555556666665 5567899999632
Q ss_pred ----c-cccccCCh----------------HHHHHHHHHhccCCeEEEEEEC
Q 008262 347 ----C-RINWTRDD----------------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ----~-l~hw~~d~----------------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. .++-.++. ..+|.++.++|||||++++++.
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 1 11111221 3789999999999999999974
No 232
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.67 E-value=2.3e-08 Score=105.68 Aligned_cols=108 Identities=17% Similarity=0.110 Sum_probs=75.7
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccCCCC----CCCCeeEEEecc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPY----PSQAFDLIHCSR 346 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~LPf----p~~sFDlI~ss~ 346 (572)
+..+|||+|||+|.++..++.. +|+++|+++.++..+..+ +...++. ..+...|+..+.. ..++||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n-~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEEN-ARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHH-HHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 3478999999999999888765 899999999888666543 3444554 3444445443321 257899999864
Q ss_pred cccccc--------CChHHHHHHHHHhccCCeEEEEEECCCCCC
Q 008262 347 CRINWT--------RDDGILLLEVNRMLRAGGYFAWAAQPVYKH 382 (572)
Q Consensus 347 ~l~hw~--------~d~~~~L~ei~RvLKPGG~lv~st~P~~~t 382 (572)
...... .+...++.++.++|+|||.+++++.+....
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 331 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT 331 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC
Confidence 322211 233578999999999999999998544333
No 233
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.66 E-value=9.2e-08 Score=95.58 Aligned_cols=117 Identities=15% Similarity=0.037 Sum_probs=79.2
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCc--EEEeccccCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRRL 332 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~--~~~~~d~e~L 332 (572)
++.+.++++ ++.+|||||||+|.++..|+.. .|+++|+++.++..+..+ +...++.. .+...|....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N-~~~~gl~~~I~v~~gD~l~~ 84 (244)
T 3gnl_A 12 LEKVASYIT------KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQ-VRSSGLTEQIDVRKGNGLAV 84 (244)
T ss_dssp HHHHHTTCC------SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHH-HHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEEecchhhc
Confidence 455555655 4578999999999999998875 699999999988766544 44455532 3444444333
Q ss_pred CCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 008262 333 PYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~ 388 (572)
..+.+.||+|++.++.- .-...+|.+..+.|+++|+|+++.. ....++++
T Consensus 85 ~~~~~~~D~IviagmGg---~lI~~IL~~~~~~L~~~~~lIlq~~---~~~~~lr~ 134 (244)
T 3gnl_A 85 IEKKDAIDTIVIAGMGG---TLIRTILEEGAAKLAGVTKLILQPN---IAAWQLRE 134 (244)
T ss_dssp CCGGGCCCEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEES---SCHHHHHH
T ss_pred cCccccccEEEEeCCch---HHHHHHHHHHHHHhCCCCEEEEEcC---CChHHHHH
Confidence 33334699988654321 1135788999999999999999952 34444444
No 234
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.66 E-value=5.5e-08 Score=102.59 Aligned_cols=100 Identities=16% Similarity=0.087 Sum_probs=71.9
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEeccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
+..+|||+|||+|.++..++.. +|+|+|+++.++..++.+ +...++ ...+...|...+++++++||+|+|+..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n-~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMN-ALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHH-HHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 5678999999999998888764 799999999998766643 344555 345666788888888899999999754
Q ss_pred cccccC------Ch-HHHHHHHHHhccCCeEEEEEE
Q 008262 348 RINWTR------DD-GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 348 l~hw~~------d~-~~~L~ei~RvLKPGG~lv~st 376 (572)
...... +. ..++.++.|+| ||.+++.+
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 332211 11 57888999999 45544443
No 235
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.66 E-value=1.5e-07 Score=97.82 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=70.6
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC--CcEEEeccccCCCCCCCCeeEEEeccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~--~~~~~~~d~e~LPfp~~sFDlI~ss~~l~ 349 (572)
++.+|||+|||+|.++.. +.. +|+++|+++.++..++.+ +...++ ...+...|...+. ++||+|++...
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n-~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP-- 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKN-IKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP-- 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--
Confidence 457999999999999988 655 799999999888666543 344454 2345555665554 78999998632
Q ss_pred cccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 350 hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.....++.++.++|+|||++++.+.
T Consensus 268 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 268 ---KFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp ---TTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ---HhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1124789999999999999998764
No 236
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.64 E-value=3.6e-08 Score=104.51 Aligned_cols=110 Identities=12% Similarity=0.028 Sum_probs=76.8
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCC-C---CCCCeeEEEe
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP-Y---PSQAFDLIHC 344 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LP-f---p~~sFDlI~s 344 (572)
+..+|||+|||+|.++..++.. +|+++|+++.++..+..+ +...++. ..+...|...+. . ..++||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n-~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKEN-AKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 4679999999999999988865 799999999988666543 3444553 344455544332 1 2578999998
Q ss_pred ccccccc--------cCChHHHHHHHHHhccCCeEEEEEECCCCCCHH
Q 008262 345 SRCRINW--------TRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEE 384 (572)
Q Consensus 345 s~~l~hw--------~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~ 384 (572)
....... ..+...++.++.++|+|||.+++++........
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 343 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQ 343 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHH
Confidence 6432221 133457899999999999999998753333333
No 237
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.63 E-value=5.2e-08 Score=111.10 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=75.3
Q ss_pred CCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCC---cEEEeccccC-CCCCCCCeeEEEecc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRR-LPYPSQAFDLIHCSR 346 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~---~~~~~~d~e~-LPfp~~sFDlI~ss~ 346 (572)
++.+|||+|||+|.++..++.. +|+++|+|+.++..+..+.+ ..++. ..+...|+.. ++...++||+|++..
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~-~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLR-LNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 3579999999999999887754 59999999998876664443 34543 3455555443 444567999999865
Q ss_pred ccc----------cccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 347 CRI----------NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ~l~----------hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
... +...+...++.++.++|||||+|++++.
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 322 2223445789999999999999999974
No 238
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.63 E-value=4.5e-08 Score=106.42 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=73.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-CCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-YPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-fp~~sFDlI~ss~ 346 (572)
.++.+|||+|||+|..+..|++. .|+++|+++.++..+.. .+...++...+...|...++ +.+++||+|++..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~-n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLE-NVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 45689999999999988887743 69999999988866554 33344555445555655554 3468999999522
Q ss_pred ----c-cc--------cccCC--------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 347 ----C-RI--------NWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ----~-l~--------hw~~d--------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. .+ +|..+ ...+|.++.++|||||+|++++-
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 1 01 12111 14689999999999999999974
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.61 E-value=7.6e-08 Score=105.06 Aligned_cols=103 Identities=18% Similarity=0.258 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCc-EEEeccccCCCC-CCCCeeEEEecc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLPY-PSQAFDLIHCSR 346 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~-~~~~~d~e~LPf-p~~sFDlI~ss~ 346 (572)
++.+|||+|||+|..+..|++. .|+++|+++.++..+..+ +...++.. .+...|...++. .+++||+|++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n-~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHAN-ISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH-HHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 5689999999999988877752 699999999888665543 33345543 344556666553 457899999731
Q ss_pred ----c-cc--------cccCC--------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 347 ----C-RI--------NWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 347 ----~-l~--------hw~~d--------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. .+ +|..+ ...+|.++.++|||||+|++++.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 1 11 12110 13689999999999999999974
No 240
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.61 E-value=1.7e-07 Score=92.57 Aligned_cols=116 Identities=15% Similarity=0.073 Sum_probs=78.2
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCc--EEEeccc-cC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA--MVAAFAT-RR 331 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~--~~~~~d~-e~ 331 (572)
++.+.++++ ++.+|||||||+|.++..++.. .|+++|+++..+..+.. .+...++.. .+...|. +.
T Consensus 6 L~~l~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~-N~~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 6 LELVASFVS------QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVK-NVEAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEECchhhh
Confidence 445555554 4578999999999999988875 69999999988866654 444456542 3333333 34
Q ss_pred CCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 008262 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~ 388 (572)
++. .+.||+|+...+.- .-...+|.++.+.|+++|+|+++. . .....+++
T Consensus 79 l~~-~~~~D~IviaG~Gg---~~i~~Il~~~~~~L~~~~~lVlq~--~-~~~~~vr~ 128 (225)
T 3kr9_A 79 FEE-TDQVSVITIAGMGG---RLIARILEEGLGKLANVERLILQP--N-NREDDLRI 128 (225)
T ss_dssp CCG-GGCCCEEEEEEECH---HHHHHHHHHTGGGCTTCCEEEEEE--S-SCHHHHHH
T ss_pred ccc-CcCCCEEEEcCCCh---HHHHHHHHHHHHHhCCCCEEEEEC--C-CCHHHHHH
Confidence 432 12699988654311 113678999999999999999985 3 34444443
No 241
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.58 E-value=2.6e-07 Score=99.32 Aligned_cols=113 Identities=15% Similarity=0.149 Sum_probs=77.4
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCC-cEEEeccccC
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRR 331 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~d~e~ 331 (572)
...+++.+.+.+. ..+..+|||+|||+|.++..|+.. +|+|+|+++.++..+.. .+...++. ..+...|...
T Consensus 271 ~e~l~~~~~~~l~----~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~-n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 271 NQKMVARALEWLD----VQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQ-NARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp HHHHHHHHHHHHT----CCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCTTS
T ss_pred HHHHHHHHHHhhc----CCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEECCHHH
Confidence 3445555555554 235679999999999999999876 89999999998876654 34445553 3455555554
Q ss_pred ----CCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 332 ----LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 332 ----LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+++.+++||+|++....... ..++..+. .++|++.++++..
T Consensus 346 ~l~~~~~~~~~fD~Vv~dPPr~g~----~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 346 DVTKQPWAKNGFDKVLLDPARAGA----AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp CCSSSGGGTTCCSEEEECCCTTCC----HHHHHHHH-HHCCSEEEEEESC
T ss_pred HhhhhhhhcCCCCEEEECCCCccH----HHHHHHHH-hcCCCeEEEEECC
Confidence 44567799999986542222 24454444 4799999999863
No 242
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.57 E-value=1.1e-07 Score=94.94 Aligned_cols=101 Identities=18% Similarity=0.049 Sum_probs=73.9
Q ss_pred CCCCEEEEECCCCchhHHHhccC-CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
..+.+|||||||+|.++..+... .++++|+++.++.-+.. .+...+.+..+...|....+.+ ++||+|++.-++++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~-~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITP-FAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHH-HHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHHh
Confidence 35789999999999999887744 89999999998855543 3444566555666666555554 599999988676666
Q ss_pred cCChHHHHHHHHHhccCCeEEEEE
Q 008262 352 TRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 352 ~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
.........++.+.|+++|.++-.
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred hhhchhhHHHHHHHhcCCCEEEEc
Confidence 333344555999999999887654
No 243
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.57 E-value=2.5e-07 Score=93.23 Aligned_cols=101 Identities=11% Similarity=-0.016 Sum_probs=73.3
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
..+.+|||||||+|.++..+... .|+++|+++.++.-.. +.+...|+...+...|.. ...+.+.||+|++.-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~-~~l~~~g~~~~~~v~D~~-~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVD-EALTRLNVPHRTNVADLL-EDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHH-HHHHHTTCCEEEEECCTT-TSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeeec-ccCCCCCcchHHHHHHH
Confidence 34789999999999999888655 8999999999885554 344445666555554432 33456889999988776
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
++........+.++.+.|+|+|.++-.
T Consensus 209 ~~Le~q~kg~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 209 PCLETQQRGSGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp HHHHHHSTTHHHHHHHHSSCSEEEEEE
T ss_pred HHhhhhhhHHHHHHHHHhCCCCEEEec
Confidence 666333333444999999999999655
No 244
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.55 E-value=2.3e-07 Score=94.37 Aligned_cols=122 Identities=12% Similarity=0.089 Sum_probs=83.6
Q ss_pred eeccCCCccccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHc
Q 008262 242 FKFPGGGTQFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALER 318 (572)
Q Consensus 242 ~~Fpggg~~f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~r 318 (572)
|.|.=..++|..+...-..++.+.+. ++.+|||+|||+|.++..++.. +|+++|+++..+..+. +.++..
T Consensus 99 ~~~D~~k~~f~~~~~~er~ri~~~~~------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~-~N~~~N 171 (278)
T 3k6r_A 99 YKLDVAKIMFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLV-ENIHLN 171 (278)
T ss_dssp EEEETTTSCCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHH-HHHHHT
T ss_pred EEEeccceEEcCCcHHHHHHHHHhcC------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHH-HHHHHc
Confidence 33333345555555555556666654 5689999999999998777643 7999999998775544 344455
Q ss_pred CCCc--EEEeccccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 319 GAPA--MVAAFATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 319 g~~~--~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
++.. .+...|...++. .+.||.|++... .....+|..+.++||+||++.+.+
T Consensus 172 ~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p-----~~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 172 KVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp TCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcEEEEeCcHHHhcc-ccCCCEEEECCC-----CcHHHHHHHHHHHcCCCCEEEEEe
Confidence 5543 344556666553 578999997633 233568888999999999997764
No 245
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.54 E-value=1.2e-07 Score=102.95 Aligned_cols=104 Identities=20% Similarity=0.186 Sum_probs=71.9
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCc-EEEeccccCCC-CCCCCeeEEEec
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLP-YPSQAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~-~~~~~d~e~LP-fp~~sFDlI~ss 345 (572)
.++.+|||+|||+|..+..|++. .|+++|+++.++..+.. .+...++.+ .+...|...++ ..+++||+|++.
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~-n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSE-NIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH-HHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 45689999999999888777653 69999999988865553 334445554 34344555554 235799999974
Q ss_pred cc---cc----------cccCCh--------HHHHHHHHHhccCCeEEEEEEC
Q 008262 346 RC---RI----------NWTRDD--------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 346 ~~---l~----------hw~~d~--------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.- .. .|..+. ..+|.++.++|||||.|+++|-
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 31 11 121111 1679999999999999999974
No 246
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.54 E-value=2.7e-07 Score=95.93 Aligned_cols=101 Identities=11% Similarity=0.136 Sum_probs=72.0
Q ss_pred CCCEEEEECCCCchhHHHhcc---------CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEe
Q 008262 274 HIRVVMDAGCGVASFGAYLLP---------RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHC 344 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~---------~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~s 344 (572)
...+|||+|||+|.++..+++ .+++|+|+++.++..+...... .+....+...|... +...+.||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~-~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADL-QRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHH-HTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHh-CCCCceEEECCCCC-ccccCCccEEEE
Confidence 457899999999998876653 3689999999888666554433 34444455555433 234578999999
Q ss_pred ccccccccCC----------------h-HHHHHHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRD----------------D-GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d----------------~-~~~L~ei~RvLKPGG~lv~st 376 (572)
+..+.++..+ . ..++.++.+.|||||++++..
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9775444211 1 157999999999999999986
No 247
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.49 E-value=5e-07 Score=97.13 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=69.4
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw 351 (572)
+..+|||+|||+|.++..|++. +|+|+|+++.++..++.+ +...++...+...|.+.+.. .+||+|++.......
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n-~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRN-VEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAGL 366 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTCS
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccch
Confidence 4579999999999999999876 799999999998766644 33445544455556666542 389999986442111
Q ss_pred cCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 352 TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 352 ~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
...++..+ +.|+|||.+++++.
T Consensus 367 ---~~~~~~~l-~~l~p~givyvsc~ 388 (425)
T 2jjq_A 367 ---HPRLVKRL-NREKPGVIVYVSCN 388 (425)
T ss_dssp ---CHHHHHHH-HHHCCSEEEEEESC
T ss_pred ---HHHHHHHH-HhcCCCcEEEEECC
Confidence 13455555 46999999999963
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.46 E-value=3.5e-07 Score=96.75 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=74.5
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEecccc
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e 330 (572)
...++.+.+.+.. .+..+|||+|||+|.++..+++ .+++|+|+++.++..+ ....+...|..
T Consensus 25 ~~l~~~~~~~~~~----~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~ 91 (421)
T 2ih2_A 25 PEVVDFMVSLAEA----PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFL 91 (421)
T ss_dssp HHHHHHHHHHCCC----CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGG
T ss_pred HHHHHHHHHhhcc----CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChh
Confidence 4556666666652 3456999999999999988875 2799999999876322 12334445555
Q ss_pred CCCCCCCCeeEEEeccccccccC---------Ch-------------------HHHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTR---------DD-------------------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~---------d~-------------------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
... +.+.||+|+++........ +. ..++..+.++|+|||.+++..+
T Consensus 92 ~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 92 LWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp GCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 544 3478999999754322211 10 1568899999999999999864
No 249
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.44 E-value=6e-07 Score=91.87 Aligned_cols=90 Identities=17% Similarity=0.065 Sum_probs=62.4
Q ss_pred CCCCEEEEECC------CCch-hHHHhcc--CCeEEEeCCccchHHHHHHHHHHcCCCcEE-EeccccCCCCCCCCeeEE
Q 008262 273 HHIRVVMDAGC------GVAS-FGAYLLP--RNVITMSIAPKDVHENQIQFALERGAPAMV-AAFATRRLPYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGC------GtG~-~a~~L~~--~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~-~~~d~e~LPfp~~sFDlI 342 (572)
.+..+|||+|| |+|. .+..+.. ..|+|+|+++. + .+ ..+ ...|+..++++ ++||+|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----------~~--v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----------SD--ADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----------CS--SSEEEESCGGGCCCS-SCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----------CC--CEEEEECccccCCcc-CcccEE
Confidence 46689999999 4465 2333333 37999999986 2 12 234 55677777765 789999
Q ss_pred Eecccccccc----CC-------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 343 HCSRCRINWT----RD-------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 343 ~ss~~l~hw~----~d-------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+|+.. .++. .+ ...+++++.|+|||||.|++..+
T Consensus 128 vsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 128 ISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp EECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 98642 2221 11 24789999999999999999864
No 250
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.42 E-value=9.7e-07 Score=89.25 Aligned_cols=117 Identities=17% Similarity=0.162 Sum_probs=72.2
Q ss_pred cHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc
Q 008262 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (572)
Q Consensus 254 g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~ 329 (572)
-+...+.++.+. .. ..+..+|||||||+|.|+..++++ .|.++|++.. +....+.. ...+........++
T Consensus 58 RaA~KL~ei~ek-~~---l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvD-l~~~pi~~-~~~g~~ii~~~~~~ 131 (277)
T 3evf_A 58 RGTAKLRWFHER-GY---VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRD-GHEKPMNV-QSLGWNIITFKDKT 131 (277)
T ss_dssp THHHHHHHHHHT-TS---SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT-TCCCCCCC-CBTTGGGEEEECSC
T ss_pred cHHHHHHHHHHh-CC---CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEecc-Cccccccc-CcCCCCeEEEeccc
Confidence 344445555555 22 245678999999999999987655 5778888732 21000000 00111223333344
Q ss_pred cCCCCCCCCeeEEEecccccc----ccCChH--HHHHHHHHhccCC-eEEEEEEC
Q 008262 330 RRLPYPSQAFDLIHCSRCRIN----WTRDDG--ILLLEVNRMLRAG-GYFAWAAQ 377 (572)
Q Consensus 330 e~LPfp~~sFDlI~ss~~l~h----w~~d~~--~~L~ei~RvLKPG-G~lv~st~ 377 (572)
+...++.+.||+|+|..+ .+ +.+... .+|..+.++|||| |.|++..+
T Consensus 132 dv~~l~~~~~DlVlsD~a-pnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 132 DIHRLEPVKCDTLLCDIG-ESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CTTTSCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred eehhcCCCCccEEEecCc-cCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 556677889999999753 33 422222 3578889999999 99999865
No 251
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.41 E-value=4.3e-07 Score=96.14 Aligned_cols=102 Identities=14% Similarity=0.211 Sum_probs=68.0
Q ss_pred CCEEEEECCCCchhHHHhc-------------------cCCeEEEeCCccchHHHHHHHHHH----------c--CCCcE
Q 008262 275 IRVVMDAGCGVASFGAYLL-------------------PRNVITMSIAPKDVHENQIQFALE----------R--GAPAM 323 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~-------------------~~~V~gvDiSp~dl~~a~~~~A~~----------r--g~~~~ 323 (572)
.-+|+|+|||+|..+..+. +-+|...|+..+|...-....... . +....
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999997776651 116778899988875443322210 0 00111
Q ss_pred EEec---cccCCCCCCCCeeEEEeccccccccCCh--------------------------------------HHHHHHH
Q 008262 324 VAAF---ATRRLPYPSQAFDLIHCSRCRINWTRDD--------------------------------------GILLLEV 362 (572)
Q Consensus 324 ~~~~---d~e~LPfp~~sFDlI~ss~~l~hw~~d~--------------------------------------~~~L~ei 362 (572)
+..+ ....-.||+++||+|+|+.+ +||..+. ..+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 12233478999999999866 8897632 3468888
Q ss_pred HHhccCCeEEEEEEC
Q 008262 363 NRMLRAGGYFAWAAQ 377 (572)
Q Consensus 363 ~RvLKPGG~lv~st~ 377 (572)
+|.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999964
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.41 E-value=1.3e-06 Score=89.57 Aligned_cols=88 Identities=9% Similarity=0.002 Sum_probs=65.7
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
..++++.+.+. ..+..+|||||||+|.++..|++. +|+++|+++.++..+..... . .....+...|...+++
T Consensus 37 ~i~~~Iv~~l~----~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~-~-~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 37 NFVNKAVESAN----LTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE-L-YNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH-H-CSSEEEEESCTTTSCG
T ss_pred HHHHHHHHhcC----CCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc-c-CCCeEEEECchhhCCc
Confidence 45666766665 245689999999999999999875 89999999999876655443 2 2234456667888888
Q ss_pred CCCCeeEEEeccccccc
Q 008262 335 PSQAFDLIHCSRCRINW 351 (572)
Q Consensus 335 p~~sFDlI~ss~~l~hw 351 (572)
++.+||.|+++.. .++
T Consensus 111 ~~~~fD~Iv~NlP-y~i 126 (295)
T 3gru_A 111 NKLDFNKVVANLP-YQI 126 (295)
T ss_dssp GGSCCSEEEEECC-GGG
T ss_pred ccCCccEEEEeCc-ccc
Confidence 8888999998743 444
No 253
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.39 E-value=2.4e-08 Score=98.91 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=71.6
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPS 336 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~ 336 (572)
++.+.+.+. ..+..+|||||||+|.++..|++. +|+|+|+++.++..+..... ......+...|...+++++
T Consensus 18 ~~~i~~~~~----~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 18 LNQIIKQLN----LKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPN 91 (245)
T ss_dssp HHHHHHHCC----CCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCC
T ss_pred HHHHHHhcC----CCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCccc
Confidence 555666654 245678999999999999888765 89999999988743321111 1112344556778888764
Q ss_pred -CCeeEEEeccc-----------cccccCChHHHH----HHHHHhccCCeEEEEEE
Q 008262 337 -QAFDLIHCSRC-----------RINWTRDDGILL----LEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 337 -~sFDlI~ss~~-----------l~hw~~d~~~~L----~ei~RvLKPGG~lv~st 376 (572)
++| .|+++.. +.|+ .+...++ +.+.|+|+|||.+.+..
T Consensus 92 ~~~f-~vv~n~Py~~~~~~~~~~~~~~-~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLSTQIIKKVVFES-RASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSEE-EEEEECCSSSCHHHHHHHHHHC-CCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CCCc-EEEEeCCccccHHHHHHHHhCC-CCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 689 6776532 1121 2333444 66899999999876653
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.38 E-value=4e-07 Score=90.35 Aligned_cols=84 Identities=17% Similarity=0.211 Sum_probs=57.8
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP 333 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP 333 (572)
...++.+.+.+. ..+..+|||||||+|.++..|+++ +|+++|+++.++..+...... .....+...|...++
T Consensus 16 ~~~~~~i~~~~~----~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 16 KHNIDKIMTNIR----LNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFK 89 (244)
T ss_dssp HHHHHHHHTTCC----CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCC
T ss_pred HHHHHHHHHhCC----CCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCC
Confidence 455667776665 245689999999999999999875 899999999887544332211 123445566788888
Q ss_pred CCC-CCeeEEEecc
Q 008262 334 YPS-QAFDLIHCSR 346 (572)
Q Consensus 334 fp~-~sFDlI~ss~ 346 (572)
+++ ..| .|+++.
T Consensus 90 ~~~~~~~-~vv~nl 102 (244)
T 1qam_A 90 FPKNQSY-KIFGNI 102 (244)
T ss_dssp CCSSCCC-EEEEEC
T ss_pred cccCCCe-EEEEeC
Confidence 774 456 455553
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.38 E-value=1.2e-06 Score=94.52 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=78.0
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-----------------CCeEEEeCCccchHHHHHHHHHHcC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----------------RNVITMSIAPKDVHENQIQFALERG 319 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-----------------~~V~gvDiSp~dl~~a~~~~A~~rg 319 (572)
..++.|.+.+. .....+|||.|||+|.++..+.+ ..++|+|+++.++..+..+... ++
T Consensus 158 ~v~~~mv~~l~----~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l-~g 232 (445)
T 2okc_A 158 PLIQAMVDCIN----PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL-HG 232 (445)
T ss_dssp HHHHHHHHHHC----CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHhC----CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH-hC
Confidence 45556666554 23457899999999988766543 3799999999887665544433 34
Q ss_pred C---CcEEEeccccCCCCCCCCeeEEEeccccccccC-C---------------hHHHHHHHHHhccCCeEEEEEEC
Q 008262 320 A---PAMVAAFATRRLPYPSQAFDLIHCSRCRINWTR-D---------------DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 320 ~---~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~-d---------------~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
. ...+...|....+.. ..||+|+++..+.+... + ...++..+.++|||||++++..+
T Consensus 233 ~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 233 IGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 4 233444455444433 48999999876544211 1 12789999999999999998863
No 256
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.32 E-value=1.4e-06 Score=92.43 Aligned_cols=119 Identities=13% Similarity=0.154 Sum_probs=76.8
Q ss_pred CCEEEEECCCCchhHHHhccC---------------------CeEEEeCCccchHHHHHHH-------HHHcC--CCcEE
Q 008262 275 IRVVMDAGCGVASFGAYLLPR---------------------NVITMSIAPKDVHENQIQF-------ALERG--APAMV 324 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~---------------------~V~gvDiSp~dl~~a~~~~-------A~~rg--~~~~~ 324 (572)
.-+|+|+||++|..+..+... +|+..|+..+|...-.... ..+.+ ....+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 568999999999666544221 5667788877764332211 12222 22334
Q ss_pred Eecc---ccCCCCCCCCeeEEEeccccccccCChHHH---------------------------------------HHHH
Q 008262 325 AAFA---TRRLPYPSQAFDLIHCSRCRINWTRDDGIL---------------------------------------LLEV 362 (572)
Q Consensus 325 ~~~d---~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~---------------------------------------L~ei 362 (572)
..+. ...-.||+++||+|+|+.+ +||..+.+.. |+-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 2334688999999999866 8997765311 5555
Q ss_pred HHhccCCeEEEEEECCCCCCH--H-----HHHHHHHHHHh
Q 008262 363 NRMLRAGGYFAWAAQPVYKHE--E-----AQEEHWKEMLD 395 (572)
Q Consensus 363 ~RvLKPGG~lv~st~P~~~tl--~-----EL~~~w~~~e~ 395 (572)
.|.|+|||.++++.. +..+. . .+..+|..+..
T Consensus 212 a~eL~pGG~mvl~~~-gr~~~~~~~~~~~~l~~al~~lv~ 250 (384)
T 2efj_A 212 SEELISRGRMLLTFI-CKEDEFDHPNSMDLLEMSINDLVI 250 (384)
T ss_dssp HHHEEEEEEEEEEEE-CCCTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhccCCeEEEEEe-cCCCcccCcccHHHHHHHHHHHHH
Confidence 899999999999974 54444 3 67777766543
No 257
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.31 E-value=1e-06 Score=92.70 Aligned_cols=118 Identities=13% Similarity=0.063 Sum_probs=72.5
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcC--C------CcEEEeccccC-CC-C--CCC
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERG--A------PAMVAAFATRR-LP-Y--PSQ 337 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg--~------~~~~~~~d~e~-LP-f--p~~ 337 (572)
.++++|||||||+|.+++.++.. +|+++|+++.++..++..+....+ . ...+...|... +. + ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 46789999999999999988765 699999999877444332211000 0 12333344322 21 1 357
Q ss_pred CeeEEEeccccccccCCh-----HHHHHHH----HHhccCCeEEEEEECCCCCCHHHHHHHHHH
Q 008262 338 AFDLIHCSRCRINWTRDD-----GILLLEV----NRMLRAGGYFAWAAQPVYKHEEAQEEHWKE 392 (572)
Q Consensus 338 sFDlI~ss~~l~hw~~d~-----~~~L~ei----~RvLKPGG~lv~st~P~~~tl~EL~~~w~~ 392 (572)
.||+|++...-......+ ..+++++ .++|+|||.++.... .....++...+.+
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~--s~~~~e~~~~~~~ 328 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN--CVNLTEALSLYEE 328 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE--ETTCHHHHHHHHH
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC--CcchHHHHHHHHH
Confidence 899999864321221111 3566666 899999999998852 2333555555543
No 258
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.23 E-value=1.8e-06 Score=90.76 Aligned_cols=107 Identities=17% Similarity=0.163 Sum_probs=70.8
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCc-EEEeccccCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLP 333 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~-~~~~~d~e~LP 333 (572)
.+.+.+.+.+. ....+|||+|||+|.++..|+.. +|+++|+++.++..+.. .+...++.+ .+...|.+.+.
T Consensus 201 ~l~~~~~~~~~-----~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~-n~~~ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 201 QMLEWALDVTK-----GSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQY-NIAANHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHHTT-----TCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHH-HHHHTTCCSEEEECCCSHHHH
T ss_pred HHHHHHHHHhh-----cCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEECCHHHHH
Confidence 44444444443 12468999999999999998875 79999999998876654 344455533 34444544321
Q ss_pred --CCC--------------CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 334 --YPS--------------QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 334 --fp~--------------~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.. .+||+|++..-. ..+..++.+.|+++|.+++.+
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPPR-------SGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEE
T ss_pred HHHhhccccccccccccccCCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEE
Confidence 111 379999965321 124566778888888888775
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.17 E-value=3.4e-06 Score=84.65 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=58.7
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
..++.+.+.+. ..+..+|||||||+|.++..|+++ +|+++|+++.++..+...... .....+...|...+++
T Consensus 16 ~i~~~iv~~~~----~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 16 FVLQKIVSAIH----PQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHC----CCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCG
T ss_pred HHHHHHHHhcC----CCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCH
Confidence 45666666665 245689999999999999999987 899999999888655433322 2234556667777776
Q ss_pred C----CCCeeEEEecc
Q 008262 335 P----SQAFDLIHCSR 346 (572)
Q Consensus 335 p----~~sFDlI~ss~ 346 (572)
+ .+.|| |+++.
T Consensus 90 ~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGNL 104 (255)
T ss_dssp GGSCCSSCEE-EEEEC
T ss_pred HHhccCCCeE-EEecC
Confidence 4 35688 66553
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.15 E-value=4.4e-06 Score=84.61 Aligned_cols=83 Identities=14% Similarity=0.122 Sum_probs=59.9
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
..++++.+.+. ..+. +|||||||+|.++..|+++ +|+++|+++.++..+..... .....+...|...+++
T Consensus 34 ~i~~~Iv~~~~----~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 34 AHLRRIVEAAR----PFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHC----CCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCG
T ss_pred HHHHHHHHhcC----CCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCCh
Confidence 45666766665 2345 8999999999999999887 89999999998865543322 2234556667777777
Q ss_pred CCC-CeeEEEeccc
Q 008262 335 PSQ-AFDLIHCSRC 347 (572)
Q Consensus 335 p~~-sFDlI~ss~~ 347 (572)
++. .+|.|+++..
T Consensus 106 ~~~~~~~~iv~NlP 119 (271)
T 3fut_A 106 EEVPQGSLLVANLP 119 (271)
T ss_dssp GGSCTTEEEEEEEC
T ss_pred hhccCccEEEecCc
Confidence 643 6899998743
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.10 E-value=1.1e-05 Score=85.75 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=75.1
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----------------------------------------
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----------------------------------------- 295 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----------------------------------------- 295 (572)
..+..|..+.. -.+...|||.+||+|.++..++..
T Consensus 188 ~lAa~ll~l~~----~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 188 TMAAALVLLTS----WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp HHHHHHHHHSC----CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHhC----CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 34444444443 234578999999999887555421
Q ss_pred -CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEeccccccccC---ChHHHHHHHHHhccC-
Q 008262 296 -NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRINWTR---DDGILLLEVNRMLRA- 368 (572)
Q Consensus 296 -~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~---d~~~~L~ei~RvLKP- 368 (572)
.|+|+|+++.++..+..+ +...++. ..+...|...++.+ .+||+|+|+.-...-.. +...+..++.+.||+
T Consensus 264 ~~V~GvDid~~al~~Ar~N-a~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQN-AVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp CCEEEEESCHHHHHHHHHH-HHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 399999999998766643 4445553 45666677778765 58999999855322211 223566667777776
Q ss_pred -CeEEEEEE
Q 008262 369 -GGYFAWAA 376 (572)
Q Consensus 369 -GG~lv~st 376 (572)
||.+++.+
T Consensus 342 ~g~~~~iit 350 (393)
T 3k0b_A 342 PTWSVYVLT 350 (393)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 88887776
No 262
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.09 E-value=2.7e-06 Score=89.51 Aligned_cols=155 Identities=11% Similarity=0.103 Sum_probs=90.9
Q ss_pred CCEEEEECCCCchhHHHhccC--------------------CeEEEeCCccchHHHHHHHHHH-cCCCcEEEec---ccc
Q 008262 275 IRVVMDAGCGVASFGAYLLPR--------------------NVITMSIAPKDVHENQIQFALE-RGAPAMVAAF---ATR 330 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--------------------~V~gvDiSp~dl~~a~~~~A~~-rg~~~~~~~~---d~e 330 (572)
.-+|+|+||++|..+..+... +|+..|+..+|........... ......+..+ ...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 456999999999655443221 5778899999885443222110 0001233332 223
Q ss_pred CCCCCCCCeeEEEeccccccccCChH---------------------------------HHHHHHHHhccCCeEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRDDG---------------------------------ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d~~---------------------------------~~L~ei~RvLKPGG~lv~st~ 377 (572)
.-.||++++|+|+|+.+ +||..+.+ .+|+-..+.|+|||.++++..
T Consensus 132 ~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 45689999999999866 89976532 348888999999999999963
Q ss_pred CCCCC-----------HHHHHHHHHHHHhhhhhhchhhhhccCcEEEeeccchhHHHHHHhcC-CCCC
Q 008262 378 PVYKH-----------EEAQEEHWKEMLDLTTRLCWELVKKEGYIAIWKKPTNNSCYLNREAG-TIPP 433 (572)
Q Consensus 378 P~~~t-----------l~EL~~~w~~~e~~~~~l~w~~v~~~g~i~iw~kpl~~~c~ll~~aG-F~~p 433 (572)
+..+ .+.+..+|..+.... .+.-+.++ .-.+..|.....+....+.+.| |...
T Consensus 211 -gr~~~~~~~~~~~~~~~~l~~al~~mv~eG-li~~ek~d-~f~~P~y~ps~~E~~~~ie~~G~F~i~ 275 (359)
T 1m6e_X 211 -GRRSEDRASTECCLIWQLLAMALNQMVSEG-LIEEEKMD-KFNIPQYTPSPTEVEAEILKEGSFLID 275 (359)
T ss_dssp -ECSSSSSSSTTTSTTTHHHHHHHHHHHHTT-CSCCSTTG-GGCCCCBCCCSHHHHHHHHHTTTBCCE
T ss_pred -cCCCCCccccchHHHHHHHHHHHHHHHHcc-ccchhhhh-ccCCCccCCCHHHHHHHHHHcCCceEE
Confidence 3322 346777887664321 00001111 1113334444555666677774 3443
No 263
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.02 E-value=1.7e-05 Score=84.11 Aligned_cols=114 Identities=12% Similarity=0.065 Sum_probs=76.1
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc------------------------------------------
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP------------------------------------------ 294 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~------------------------------------------ 294 (572)
..+..|..+.. -.+..+|||.|||+|.++..++.
T Consensus 182 ~lAa~ll~~~~----~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 182 TLAAGLIYLTP----WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHHTSC----CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHHhhC----CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 34444554443 23567899999999988766532
Q ss_pred CCeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEeccccccccC---ChHHHHHHHHHhccC-
Q 008262 295 RNVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRINWTR---DDGILLLEVNRMLRA- 368 (572)
Q Consensus 295 ~~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~---d~~~~L~ei~RvLKP- 368 (572)
..|+|+|+++.++..+..+ +...++. ..+...|...++.+ ++||+|+|+.....-.. +...++.++.++||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~N-a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIAREN-AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp CCEEEEESCHHHHHHHHHH-HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred ceEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 2599999999998766644 3344553 34555677777764 58999999865432211 224677777778876
Q ss_pred -CeEEEEEE
Q 008262 369 -GGYFAWAA 376 (572)
Q Consensus 369 -GG~lv~st 376 (572)
||.+++-+
T Consensus 336 ~g~~~~iit 344 (385)
T 3ldu_A 336 KNWSYYLIT 344 (385)
T ss_dssp BSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 88877765
No 264
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.01 E-value=2e-05 Score=81.11 Aligned_cols=103 Identities=9% Similarity=-0.029 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCc-EEEeccccCCCCCC---CCeeEEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLPYPS---QAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~-~~~~~d~e~LPfp~---~sFDlI~ 343 (572)
.++.+|||+|||+|..+..|++. .|+++|+++.++..... .+...++.+ .+...|...++... ++||.|+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~-n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMAT-LLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 45689999999999988877652 79999999988865553 334445543 44455666554322 5799999
Q ss_pred ecc----c-cc------cc----c-CCh-------HHHHHHHHHhccCCeEEEEEEC
Q 008262 344 CSR----C-RI------NW----T-RDD-------GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 344 ss~----~-l~------hw----~-~d~-------~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+.. . .+ .| . .+. ..+|..+.++|+ ||+++.++-
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 731 1 11 11 1 111 146777778887 999999874
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.00 E-value=8.9e-06 Score=91.33 Aligned_cols=97 Identities=14% Similarity=0.077 Sum_probs=63.2
Q ss_pred CCCEEEEECCCCchhH---HHhccC-----CeEEEeCCccchHHHHHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEE
Q 008262 274 HIRVVMDAGCGVASFG---AYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a---~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ 343 (572)
+...|||+|||+|.+. ....++ +|++|+-++.... ..+..+..+.. ..+...+++++..| +.+|+|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~--a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVV--TLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHH--HHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHH--HHHHHHhccCCCeEEEEeCcceeccCC-cccCEEE
Confidence 4457999999999773 222222 6899999984332 22334444443 34556678888776 6899999
Q ss_pred ecccccccc-CChHHHHHHHHHhccCCeEEE
Q 008262 344 CSRCRINWT-RDDGILLLEVNRMLRAGGYFA 373 (572)
Q Consensus 344 ss~~l~hw~-~d~~~~L~ei~RvLKPGG~lv 373 (572)
|-.+-.... +-....|....|.|||||.++
T Consensus 434 SEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 754322111 222467788899999999975
No 266
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.99 E-value=2.8e-05 Score=82.48 Aligned_cols=102 Identities=11% Similarity=0.012 Sum_probs=71.6
Q ss_pred CCCCEEEEECCCCchhHHHhcc------------------------------------------CCeEEEeCCccchHHH
Q 008262 273 HHIRVVMDAGCGVASFGAYLLP------------------------------------------RNVITMSIAPKDVHEN 310 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~------------------------------------------~~V~gvDiSp~dl~~a 310 (572)
.+...+||.+||+|.++...+. ..|+|+|+++.++..+
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 3457899999999988765542 1399999999998766
Q ss_pred HHHHHHHcCCC--cEEEeccccCCCCCCCCeeEEEeccccccccC---ChHHHHHHHHHhccC--CeEEEEEE
Q 008262 311 QIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRINWTR---DDGILLLEVNRMLRA--GGYFAWAA 376 (572)
Q Consensus 311 ~~~~A~~rg~~--~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~---d~~~~L~ei~RvLKP--GG~lv~st 376 (572)
.. .+...++. ..+...|...++.+ .+||+|+|+.-...-.. +...++.++.+.||+ ||.+++.+
T Consensus 273 r~-Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RK-NAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HH-HHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HH-HHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 54 44445654 34556677778765 58999999865332222 234677777778876 88888776
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.98 E-value=6.5e-06 Score=87.19 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=68.5
Q ss_pred CCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHc--------------CCC-cEEEeccccCCC-
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER--------------GAP-AMVAAFATRRLP- 333 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~r--------------g~~-~~~~~~d~e~LP- 333 (572)
...+|||+|||+|.++..++.+ +|+++|+++..+..+..+..... ++. ..+...|...+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 3578999999999998877653 69999999988766655444431 444 334444543332
Q ss_pred CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
...+.||+|++... .....++..+.+.||+||+++++.
T Consensus 127 ~~~~~fD~I~lDP~-----~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPF-----GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCS-----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCC-----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 11357999996531 223688999999999999998874
No 268
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.94 E-value=1.6e-05 Score=88.02 Aligned_cols=115 Identities=14% Similarity=0.089 Sum_probs=75.0
Q ss_pred HHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc----------------------CCeEEEeCCccchHHHHHHHH
Q 008262 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP----------------------RNVITMSIAPKDVHENQIQFA 315 (572)
Q Consensus 258 ~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~----------------------~~V~gvDiSp~dl~~a~~~~A 315 (572)
.++.|.+.+. .....+|||.+||+|.+...+.+ ..++|+|+++.++.-+.....
T Consensus 157 iv~~mv~~l~----p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 157 LIKTIIHLLK----PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhc----cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 4455555554 23457899999999988755532 269999999987765554433
Q ss_pred HHcCCC------cEEEeccccCCC-CCCCCeeEEEeccccccccC------------C-hHHHHHHHHHhccCCeEEEEE
Q 008262 316 LERGAP------AMVAAFATRRLP-YPSQAFDLIHCSRCRINWTR------------D-DGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 316 ~~rg~~------~~~~~~d~e~LP-fp~~sFDlI~ss~~l~hw~~------------d-~~~~L~ei~RvLKPGG~lv~s 375 (572)
. .+.. ..+...|.-..+ ...+.||+|+++..+..... + ...++..+.+.|||||++.+.
T Consensus 233 l-~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V 311 (541)
T 2ar0_A 233 L-HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVV 311 (541)
T ss_dssp T-TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred H-hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEE
Confidence 2 3433 223334432222 34578999999865433211 1 137899999999999999988
Q ss_pred EC
Q 008262 376 AQ 377 (572)
Q Consensus 376 t~ 377 (572)
.+
T Consensus 312 ~p 313 (541)
T 2ar0_A 312 VP 313 (541)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 269
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.84 E-value=1.8e-05 Score=84.22 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=68.6
Q ss_pred CCCEEEEECCCCchhHHHhcc-----CCeEEEeCCccchHHHHHHHHHHcCCC---cEEEeccccCC-C-CCCCCeeEEE
Q 008262 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRRL-P-YPSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiSp~dl~~a~~~~A~~rg~~---~~~~~~d~e~L-P-fp~~sFDlI~ 343 (572)
++.+|||++||+|.++..++. ..|+++|+++..+..+.. .++..++. ..+...|+..+ . ...+.||+|+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~-N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKE-NFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 457899999999999988776 269999999987755443 44445554 33444454222 1 1246799999
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.. . .....++..+.+.|++||+++++.
T Consensus 131 lDP----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 864 1 223578999999999999998885
No 270
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.84 E-value=1.7e-05 Score=89.36 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=71.8
Q ss_pred HHHHHHHHHhcccccc-CCCCCEEEEECCCCchhHH----Hh--cc---------C--CeEEEeCCccchHHHHHHHHHH
Q 008262 256 DQYLDQIAKMVPDITW-GHHIRVVMDAGCGVASFGA----YL--LP---------R--NVITMSIAPKDVHENQIQFALE 317 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~-~~~~~~VLDIGCGtG~~a~----~L--~~---------~--~V~gvDiSp~dl~~a~~~~A~~ 317 (572)
+.|-+.|...+.+... ......|||||||+|.+.. +. ++ . +|++||-++......+...+..
T Consensus 390 ~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng 469 (745)
T 3ua3_A 390 DVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRT 469 (745)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcC
Confidence 3455556555544321 1224579999999998742 11 12 2 8999999985443333322211
Q ss_pred cCCCcEEEeccccCCCCC-----CCCeeEEEecccccccc-CC-hHHHHHHHHHhccCCeEEE
Q 008262 318 RGAPAMVAAFATRRLPYP-----SQAFDLIHCSRCRINWT-RD-DGILLLEVNRMLRAGGYFA 373 (572)
Q Consensus 318 rg~~~~~~~~d~e~LPfp-----~~sFDlI~ss~~l~hw~-~d-~~~~L~ei~RvLKPGG~lv 373 (572)
-+-...+...+++++..+ .+..|+|+|-.+ ..+. .+ ....|..+.|.|||||.++
T Consensus 470 ~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 470 WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCeEEEEeCchhhcccccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 122345556677877663 578999998644 3322 22 2478888899999999865
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.81 E-value=2.4e-05 Score=79.48 Aligned_cols=71 Identities=10% Similarity=0.147 Sum_probs=51.6
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--C----eEEEeCCccchHHHHHHHHHHcCCCcEEEecccc
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--N----VITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~----V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e 330 (572)
..++.+.+.+. ..+..+|||||||+|.++..|+++ . |+++|+++.++..+... + .....+...|..
T Consensus 29 ~i~~~iv~~~~----~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~---~~~v~~i~~D~~ 100 (279)
T 3uzu_A 29 GVIDAIVAAIR----PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F---GELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHC----CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H---GGGEEEEESCGG
T ss_pred HHHHHHHHhcC----CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c---CCCcEEEECChh
Confidence 44566666665 245689999999999999999875 5 99999999988665544 2 223345566777
Q ss_pred CCCCC
Q 008262 331 RLPYP 335 (572)
Q Consensus 331 ~LPfp 335 (572)
.++++
T Consensus 101 ~~~~~ 105 (279)
T 3uzu_A 101 TFDFG 105 (279)
T ss_dssp GCCGG
T ss_pred cCChh
Confidence 87765
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.80 E-value=0.00011 Score=75.21 Aligned_cols=122 Identities=14% Similarity=0.120 Sum_probs=77.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-c----CCCcEEEeccc-cCCCCCCCCeeEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-R----GAPAMVAAFAT-RRLPYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-r----g~~~~~~~~d~-e~LPfp~~sFDlI 342 (572)
.++++||-||.|.|..++.+++. +|+.+|+.+..+.-+..-+... . .....+...|. +-+.-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 56789999999999999998875 6899999997664443322211 1 12233333343 3344557899999
Q ss_pred EeccccccccCCh----HHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHh
Q 008262 343 HCSRCRINWTRDD----GILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLD 395 (572)
Q Consensus 343 ~ss~~l~hw~~d~----~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~e~ 395 (572)
+.-. ........ ..+++.++|+|+|||.++..........+.+......+..
T Consensus 162 i~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~ 217 (294)
T 3o4f_A 162 ISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSH 217 (294)
T ss_dssp EESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred EEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHh
Confidence 9753 23222111 4899999999999999998642223344444444444433
No 273
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.78 E-value=3e-05 Score=78.54 Aligned_cols=115 Identities=14% Similarity=0.110 Sum_probs=68.9
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecccc
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e 330 (572)
+...+.+|.+.. . ..+..+|||||||+|.|+.+.+++ .|+|+|++..+...+. .. ...+........+++
T Consensus 75 AAfKL~ei~eK~-~---Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi-~~-~~~g~~ii~~~~~~d 148 (282)
T 3gcz_A 75 GSAKLRWMEERG-Y---VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI-MR-TTLGWNLIRFKDKTD 148 (282)
T ss_dssp HHHHHHHHHHTT-S---CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-CC-CBTTGGGEEEECSCC
T ss_pred HHHHHHHHHHhc-C---CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc-cc-ccCCCceEEeeCCcc
Confidence 444455555543 1 246679999999999999987754 6889998754221100 00 001111222222223
Q ss_pred CCCCCCCCeeEEEeccccccccCCh-----H--HHHHHHHHhccCC--eEEEEEEC
Q 008262 331 RLPYPSQAFDLIHCSRCRINWTRDD-----G--ILLLEVNRMLRAG--GYFAWAAQ 377 (572)
Q Consensus 331 ~LPfp~~sFDlI~ss~~l~hw~~d~-----~--~~L~ei~RvLKPG--G~lv~st~ 377 (572)
...++.+.+|+|+|..+ .+ .... . .+|.-+.++|||| |.|++-.+
T Consensus 149 v~~l~~~~~DvVLSDmA-pn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 149 VFNMEVIPGDTLLCDIG-ES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp GGGSCCCCCSEEEECCC-CC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred hhhcCCCCcCEEEecCc-cC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 33456789999999754 44 2221 1 3566678999999 99999865
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.76 E-value=8.3e-05 Score=74.07 Aligned_cols=107 Identities=13% Similarity=0.087 Sum_probs=65.7
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHc-CCCcEEEeccccC
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALER-GAPAMVAAFATRR 331 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~r-g~~~~~~~~d~e~ 331 (572)
...++.+.+.+. ..+..+|||||||+|.++..|+++ +|+++|+++.++.. ++++ .....+...|...
T Consensus 17 ~~i~~~iv~~~~----~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~-----~~~~~~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 17 EGVLKKIAEELN----IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVEN-----LKSIGDERLEVINEDASK 87 (249)
T ss_dssp HHHHHHHHHHTT----CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHH-----HTTSCCTTEEEECSCTTT
T ss_pred HHHHHHHHHhcC----CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHH-----HHhccCCCeEEEEcchhh
Confidence 345667777765 245689999999999999999876 69999999987743 3333 1223455667788
Q ss_pred CCCCCCC-eeEEEeccccccccCChHHHHHHHHHhc--cCCeEEEEE
Q 008262 332 LPYPSQA-FDLIHCSRCRINWTRDDGILLLEVNRML--RAGGYFAWA 375 (572)
Q Consensus 332 LPfp~~s-FDlI~ss~~l~hw~~d~~~~L~ei~RvL--KPGG~lv~s 375 (572)
+++++.. ...|+++.. .+. ...++.++.+.. -+.+.+++.
T Consensus 88 ~~~~~~~~~~~vv~NlP-y~i---~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 88 FPFCSLGKELKVVGNLP-YNV---ASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp CCGGGSCSSEEEEEECC-TTT---HHHHHHHHHHTGGGCSEEEEEEE
T ss_pred CChhHccCCcEEEEECc-hhc---cHHHHHHHHhcCCCCceEEEEEe
Confidence 8776421 225555532 222 234444444432 344444444
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.74 E-value=2.8e-05 Score=77.70 Aligned_cols=83 Identities=10% Similarity=0.074 Sum_probs=53.3
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-C--eEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-N--VITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP 333 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-~--V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP 333 (572)
..++.+.+.+. ..+..+|||||||+|.++. +... + |+++|+++.++..+...... .....+...|...++
T Consensus 8 ~i~~~iv~~~~----~~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~--~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAIN----PQKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFL--GPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHC----CCTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTT--GGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcC----CCCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhcc--CCceEEEECchhhCC
Confidence 44566666654 2456789999999999999 7543 6 99999999887433321111 012345556777777
Q ss_pred CCC-----CCeeEEEecc
Q 008262 334 YPS-----QAFDLIHCSR 346 (572)
Q Consensus 334 fp~-----~sFDlI~ss~ 346 (572)
+++ +..|.|+++.
T Consensus 81 ~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHHHTSCEEEEEEC
T ss_pred HHHhhcccCCceEEEECC
Confidence 542 2357888764
No 276
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.67 E-value=0.00038 Score=70.97 Aligned_cols=101 Identities=14% Similarity=0.170 Sum_probs=62.9
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.+..+||||||++|.|+..++++ .|+|+|+...+...... ....+........+++...+..+.+|+|+|..+
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A- 156 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG- 156 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEeecCceeeecCCCCcCEEeecCc-
Confidence 46789999999999999999975 67888887532100000 000011112222222333345678999999744
Q ss_pred ccccCCh-------HHHHHHHHHhccCC-eEEEEEEC
Q 008262 349 INWTRDD-------GILLLEVNRMLRAG-GYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d~-------~~~L~ei~RvLKPG-G~lv~st~ 377 (572)
.+ .... ..+|.-+.++|+|| |.|++-.+
T Consensus 157 Pn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF 192 (300)
T 3eld_A 157 ES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVL 192 (300)
T ss_dssp CC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEES
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEec
Confidence 44 2222 14566678999999 99999865
No 277
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.66 E-value=0.00035 Score=73.52 Aligned_cols=110 Identities=11% Similarity=0.055 Sum_probs=70.9
Q ss_pred CCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccc
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~h 350 (572)
.++.+|||+||++|.|+..|.++ .|++||..+.+- .... .....+...|...+..+.+.||+|+|...
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~------~l~~-~~~V~~~~~d~~~~~~~~~~~D~vvsDm~--- 279 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQ------SLMD-TGQVTWLREDGFKFRPTRSNISWMVCDMV--- 279 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCH------HHHT-TTCEEEECSCTTTCCCCSSCEEEEEECCS---
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcCh------hhcc-CCCeEEEeCccccccCCCCCcCEEEEcCC---
Confidence 56799999999999999999987 799999987432 1111 12334555566666666678999998744
Q ss_pred ccCChHHHHHHHHHhccCC---eEEEEEECCCCCCHHHHHHHHHHHH
Q 008262 351 WTRDDGILLLEVNRMLRAG---GYFAWAAQPVYKHEEAQEEHWKEML 394 (572)
Q Consensus 351 w~~d~~~~L~ei~RvLKPG---G~lv~st~P~~~tl~EL~~~w~~~e 394 (572)
.++...+.-+.+.|..| +.++..-.+......++.+....+.
T Consensus 280 --~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~ 324 (375)
T 4auk_A 280 --EKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQ 324 (375)
T ss_dssp --SCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHH
T ss_pred --CChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHH
Confidence 34556666666655554 5443333444444555555444333
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.65 E-value=9e-05 Score=82.04 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=75.3
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhc-------------------cCCeEEEeCCccchHHHHHHHHH
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLL-------------------PRNVITMSIAPKDVHENQIQFAL 316 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~-------------------~~~V~gvDiSp~dl~~a~~~~A~ 316 (572)
...++.|.+++.. . ..+|||.+||+|.|...+. ...++|+|+++.++.-+......
T Consensus 231 ~~Vv~lmv~ll~p----~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l 305 (544)
T 3khk_A 231 KSIVTLIVEMLEP----Y-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI 305 (544)
T ss_dssp HHHHHHHHHHHCC----C-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----C-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH
Confidence 3455566666541 2 2489999999998876542 23689999999877665554443
Q ss_pred HcCCCcEE--EeccccCCC-CCCCCeeEEEecccccc--ccCC-------------------------h-HHHHHHHHHh
Q 008262 317 ERGAPAMV--AAFATRRLP-YPSQAFDLIHCSRCRIN--WTRD-------------------------D-GILLLEVNRM 365 (572)
Q Consensus 317 ~rg~~~~~--~~~d~e~LP-fp~~sFDlI~ss~~l~h--w~~d-------------------------~-~~~L~ei~Rv 365 (572)
.++...+ ...|.-..+ +....||+|+++.-+.. |..+ . -.++..+.+.
T Consensus 306 -~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~ 384 (544)
T 3khk_A 306 -RGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYH 384 (544)
T ss_dssp -TTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHT
T ss_pred -hCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHH
Confidence 3443222 233332223 45678999999875442 2110 0 1688999999
Q ss_pred ccCCeEEEEEEC
Q 008262 366 LRAGGYFAWAAQ 377 (572)
Q Consensus 366 LKPGG~lv~st~ 377 (572)
|||||++.+..+
T Consensus 385 Lk~gGr~aiVlP 396 (544)
T 3khk_A 385 LAPTGSMALLLA 396 (544)
T ss_dssp EEEEEEEEEEEE
T ss_pred hccCceEEEEec
Confidence 999999988864
No 279
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.65 E-value=7.6e-06 Score=82.14 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=50.2
Q ss_pred CCCEEEEECCCCchhHHHhccC--CeEEEeCCc-------cchHHHHHHHHHHcCC-C-cEEEeccccC-CC-CCC--CC
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAP-------KDVHENQIQFALERGA-P-AMVAAFATRR-LP-YPS--QA 338 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp-------~dl~~a~~~~A~~rg~-~-~~~~~~d~e~-LP-fp~--~s 338 (572)
+..+|||+|||+|.++..|+.. +|+++|+++ .++..+..+. ...++ . ..+...|.+. ++ +++ ++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~-~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNP-ETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSH-HHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHH-HhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 4578999999999999988866 899999999 6665443222 11222 1 3344455544 33 444 78
Q ss_pred eeEEEecccccc
Q 008262 339 FDLIHCSRCRIN 350 (572)
Q Consensus 339 FDlI~ss~~l~h 350 (572)
||+|++...+.+
T Consensus 162 fD~V~~dP~~~~ 173 (258)
T 2r6z_A 162 PDIVYLDPMYPE 173 (258)
T ss_dssp CSEEEECCCC--
T ss_pred ccEEEECCCCCC
Confidence 999999866443
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.61 E-value=0.00027 Score=80.55 Aligned_cols=115 Identities=10% Similarity=0.024 Sum_probs=72.4
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc------------------------------------------
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP------------------------------------------ 294 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~------------------------------------------ 294 (572)
.++..|..+.. -.+...|||.+||+|.++...+.
T Consensus 177 ~LAa~ll~~~~----~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 177 TLAAAIVMRSG----WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp HHHHHHHHHTT----CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhC----CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 34444444443 13457899999999988654331
Q ss_pred ----CCeEEEeCCccchHHHHHHHHHHcCCCc--EEEeccccCC--CCCCCCeeEEEecccccc-ccCC--hH---HHHH
Q 008262 295 ----RNVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRRL--PYPSQAFDLIHCSRCRIN-WTRD--DG---ILLL 360 (572)
Q Consensus 295 ----~~V~gvDiSp~dl~~a~~~~A~~rg~~~--~~~~~d~e~L--Pfp~~sFDlI~ss~~l~h-w~~d--~~---~~L~ 360 (572)
..|+|+|+++.++..+.. .+...|+.. .+...|...+ |...++||+|+|+.-... +... .. ..|.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~-N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~ 331 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRART-NARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLG 331 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHH
Confidence 269999999998866654 444556653 4555666666 344458999999854322 2111 12 3345
Q ss_pred HHHHhccCCeEEEEEE
Q 008262 361 EVNRMLRAGGYFAWAA 376 (572)
Q Consensus 361 ei~RvLKPGG~lv~st 376 (572)
++.+.+.|||.+++-+
T Consensus 332 ~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 332 RIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHHCTTCEEEEEE
T ss_pred HHHHhhCCCCeEEEEe
Confidence 5556666899998875
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.55 E-value=0.00041 Score=79.51 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=67.9
Q ss_pred CCCEEEEECCCCchhHHHhccC-------CeEEEeCCccchHHHHHHHHHH-----cCCCc-EEEeccccCC-CCCCCCe
Q 008262 274 HIRVVMDAGCGVASFGAYLLPR-------NVITMSIAPKDVHENQIQFALE-----RGAPA-MVAAFATRRL-PYPSQAF 339 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-------~V~gvDiSp~dl~~a~~~~A~~-----rg~~~-~~~~~d~e~L-Pfp~~sF 339 (572)
...+|||.|||+|.++..++.. .++|+|+++..+..+..+.... .+... .+...+.... +...+.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 4679999999999988776543 5899999998775552222221 22222 2333333332 2345789
Q ss_pred eEEEeccccccccC---------------------------C-hHHHHHHHHHhccCCeEEEEEEC
Q 008262 340 DLIHCSRCRINWTR---------------------------D-DGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 340 DlI~ss~~l~hw~~---------------------------d-~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|+|+++.-...... + ...++..+.+.|++||++.+..+
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99999876532111 1 12467889999999999999874
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.53 E-value=0.00029 Score=77.98 Aligned_cols=120 Identities=16% Similarity=0.121 Sum_probs=76.2
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-------CCeEEEeCCccchHHHHHHHHHHcCCC---cEEEe
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-------RNVITMSIAPKDVHENQIQFALERGAP---AMVAA 326 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-------~~V~gvDiSp~dl~~a~~~~A~~rg~~---~~~~~ 326 (572)
..++.|.+++..........+|||.+||+|.+...+.+ ..++|+|+++.+..-+..+... ++.. ..+..
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~~~~I~~ 282 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL-HGVPIENQFLHN 282 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEE
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH-cCCCcCccceEe
Confidence 34555555554211123567999999999987765532 2699999999877655554433 4442 23444
Q ss_pred ccccCC--C-CCCCCeeEEEeccccc-cccC------C---------------hHHHHHHHHHhcc-CCeEEEEEEC
Q 008262 327 FATRRL--P-YPSQAFDLIHCSRCRI-NWTR------D---------------DGILLLEVNRMLR-AGGYFAWAAQ 377 (572)
Q Consensus 327 ~d~e~L--P-fp~~sFDlI~ss~~l~-hw~~------d---------------~~~~L~ei~RvLK-PGG~lv~st~ 377 (572)
.|.-.. | .....||+|+++.-+. .|.. + .-.++..+.+.|| +||++.+..+
T Consensus 283 gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 283 ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred cceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 454333 3 4567899999985432 2211 0 0147899999999 9999988864
No 283
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.49 E-value=4e-05 Score=78.66 Aligned_cols=83 Identities=10% Similarity=0.174 Sum_probs=55.3
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP- 333 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP- 333 (572)
++++.+.+. ..+..+|||+|||+|.++..++++ .|+|+|+++.++..+..... ..+....+...+...++
T Consensus 15 l~e~l~~L~----~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~-~~g~~v~~v~~d~~~l~~ 89 (301)
T 1m6y_A 15 VREVIEFLK----PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLK-EFSDRVSLFKVSYREADF 89 (301)
T ss_dssp HHHHHHHHC----CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTG-GGTTTEEEEECCGGGHHH
T ss_pred HHHHHHhcC----CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEECCHHHHHH
Confidence 444445554 245689999999999999888763 79999999998866554332 22323445555666654
Q ss_pred -CC---CCCeeEEEecc
Q 008262 334 -YP---SQAFDLIHCSR 346 (572)
Q Consensus 334 -fp---~~sFDlI~ss~ 346 (572)
+. .++||.|++..
T Consensus 90 ~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 90 LLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHTTCSCEEEEEEEC
T ss_pred HHHhcCCCCCCEEEEcC
Confidence 11 15899999754
No 284
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.43 E-value=0.0001 Score=78.88 Aligned_cols=108 Identities=14% Similarity=0.020 Sum_probs=67.7
Q ss_pred CCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHH-cCCC-cEEEeccccC-CCC-CCCCeeEEEecccc
Q 008262 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALE-RGAP-AMVAAFATRR-LPY-PSQAFDLIHCSRCR 348 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~-rg~~-~~~~~~d~e~-LPf-p~~sFDlI~ss~~l 348 (572)
+.+|||+|||+|..+..|+.. +|+++|+++.++..++.+.... .+.. ..+...|... ++. ++++||+|++....
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPAR 173 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCCC
Confidence 589999999999999888876 7999999999887666544332 0443 3344455544 232 24689999986321
Q ss_pred c-------cccCChHHHHHHHHHhc-cCCeEEEEEECCCCCC
Q 008262 349 I-------NWTRDDGILLLEVNRML-RAGGYFAWAAQPVYKH 382 (572)
Q Consensus 349 ~-------hw~~d~~~~L~ei~RvL-KPGG~lv~st~P~~~t 382 (572)
. +-..+..--+.++.+.| +.+..+++...|+.+.
T Consensus 174 r~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~ld~ 215 (410)
T 3ll7_A 174 RSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPMIDL 215 (410)
T ss_dssp C-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTTSCH
T ss_pred cCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCCCCh
Confidence 1 11122223345555544 4456677776665543
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.27 E-value=0.00014 Score=73.11 Aligned_cols=93 Identities=12% Similarity=0.030 Sum_probs=55.7
Q ss_pred CEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHH--HHHHHHc----C-C--CcEEEeccccC-CCCCCCCeeEEE
Q 008262 276 RVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQ--IQFALER----G-A--PAMVAAFATRR-LPYPSQAFDLIH 343 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~--~~~A~~r----g-~--~~~~~~~d~e~-LPfp~~sFDlI~ 343 (572)
.+|||+|||+|..+..++.+ +|+++|.++.+..-.. ++.+... + + ...+...|... ++...++||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 78999999999999888765 8999999996532221 2222211 1 1 12344444433 443234799999
Q ss_pred eccccccccCChHHHHHHHHHhccCCe
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGG 370 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG 370 (572)
+...+ +. .....++++..++||+.+
T Consensus 170 lDP~y-~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDPMF-PH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECCCC-CC-CCC-----HHHHHHHHHS
T ss_pred EcCCC-CC-cccchHHHHHHHHHHHhh
Confidence 98765 33 223456777778887765
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.26 E-value=0.0023 Score=65.08 Aligned_cols=128 Identities=11% Similarity=0.008 Sum_probs=74.7
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhc---------cCCeEEEeCCccc---------------------
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLL---------PRNVITMSIAPKD--------------------- 306 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~---------~~~V~gvDiSp~d--------------------- 306 (572)
..+..+.+.+.. ...+..|||+|+..|..+..|+ +++|+++|....+
T Consensus 92 ~~L~~l~~~v~~---~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~ 168 (282)
T 2wk1_A 92 ENIRQCVEDVIG---NNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNS 168 (282)
T ss_dssp HHHHHHHHHHHH---TTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHH
T ss_pred HHHHHHHHHHHh---cCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccc
Confidence 344444444432 2456799999999997665542 4589999964321
Q ss_pred -----hHHHHHHHHHHcCC--C-cEEEecc-ccCCC-CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 307 -----VHENQIQFALERGA--P-AMVAAFA-TRRLP-YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 307 -----l~~a~~~~A~~rg~--~-~~~~~~d-~e~LP-fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+..+. +...+.++ . ..+..++ .+.|| ++.++||+|+.-.- ........|..+.+.|+|||++++..
T Consensus 169 ~~~~~~~~ar-~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 169 VLAVSEEEVR-RNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp HHCCCHHHHH-HHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cchhHHHHHH-HHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcC
Confidence 11122 22233344 2 3333333 24455 44678999997532 21223578999999999999998876
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 008262 377 QPVYKHEEAQEEHWKEML 394 (572)
Q Consensus 377 ~P~~~tl~EL~~~w~~~e 394 (572)
. ... ...+++|.++.
T Consensus 245 ~--~~~-~G~~~Av~Ef~ 259 (282)
T 2wk1_A 245 Y--MMC-PPCKDAVDEYR 259 (282)
T ss_dssp C--TTC-HHHHHHHHHHH
T ss_pred C--CCC-HHHHHHHHHHH
Confidence 3 222 23355555443
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.25 E-value=0.00061 Score=62.75 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=60.8
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCc-hhHHHhcc-C--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVA-SFGAYLLP-R--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG-~~a~~L~~-~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf 334 (572)
.+.|.+.+... -....+|||||||.| ..+..|++ . +|+++|+++..+. +...|... |.
T Consensus 22 ~e~LaeYI~~~--~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~ 83 (153)
T 2k4m_A 22 WNDLAVYIIRC--SGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PR 83 (153)
T ss_dssp HHHHHHHHHHH--SCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CC
T ss_pred HHHHHHHHHhc--CCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-Cc
Confidence 34455554321 123479999999999 59999986 4 7999999997652 33334433 32
Q ss_pred CC--CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 335 PS--QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 335 p~--~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.+ +.||+|.+.+. ..+....+.++.+.+ |.-+++..
T Consensus 84 ~~~Y~~~DLIYsirP----P~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 84 MEIYRGAALIYSIRP----PAEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp HHHHTTEEEEEEESC----CTTTHHHHHHHHHHH--TCEEEEEC
T ss_pred ccccCCcCEEEEcCC----CHHHHHHHHHHHHHc--CCCEEEEc
Confidence 22 48999987654 245566666666644 56677774
No 288
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.21 E-value=0.0024 Score=63.94 Aligned_cols=116 Identities=18% Similarity=0.187 Sum_probs=67.5
Q ss_pred ccccHHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHH-cCCCcE-E
Q 008262 251 FIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RGAPAM-V 324 (572)
Q Consensus 251 f~~g~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~-rg~~~~-~ 324 (572)
|...+...+.+|.+.- + .++..+|||+||+.|.|+.+.+++ .|.|.++... ++.. ..... .|...+ +
T Consensus 54 yRSRAayKL~EIdeK~--l--ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D-~~~~--P~~~~~~Gv~~i~~ 126 (269)
T 2px2_A 54 PVSRGTAKLRWLVERR--F--VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP-GHEE--PMLMQSYGWNIVTM 126 (269)
T ss_dssp CSSTHHHHHHHHHHTT--S--CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCST-TSCC--CCCCCSTTGGGEEE
T ss_pred cccHHHHHHHHHHHcC--C--CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccc-cccC--CCcccCCCceEEEe
Confidence 3444555566666663 2 357899999999999999999886 3345555432 1000 00000 111121 2
Q ss_pred Eec-cccCCCCCCCCeeEEEeccccccccCCh----H---HHHHHHHHhccCCe-EEEEEEC
Q 008262 325 AAF-ATRRLPYPSQAFDLIHCSRCRINWTRDD----G---ILLLEVNRMLRAGG-YFAWAAQ 377 (572)
Q Consensus 325 ~~~-d~e~LPfp~~sFDlI~ss~~l~hw~~d~----~---~~L~ei~RvLKPGG-~lv~st~ 377 (572)
... |...+ ....+|+|+|-.. -. .... . .+|.-+.++|+||| .|++-.+
T Consensus 127 ~~G~Df~~~--~~~~~DvVLSDMA-Pn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 127 KSGVDVFYK--PSEISDTLLCDIG-ES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp ECSCCGGGS--CCCCCSEEEECCC-CC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred eccCCccCC--CCCCCCEEEeCCC-CC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 212 54443 3467999998643 22 2222 1 24656678999999 9999875
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.17 E-value=0.00036 Score=69.91 Aligned_cols=102 Identities=20% Similarity=0.165 Sum_probs=58.2
Q ss_pred CCCCEEEEECCCCchhHHHhc----------------cCCeEEEeCCc---cchHHHH------HHHHHH---c------
Q 008262 273 HHIRVVMDAGCGVASFGAYLL----------------PRNVITMSIAP---KDVHENQ------IQFALE---R------ 318 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~----------------~~~V~gvDiSp---~dl~~a~------~~~A~~---r------ 318 (572)
.+..+|||||||+|..+..+. ..+++++|..+ .++..+. ...+++ .
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 345789999999997554422 12789999887 3333221 011111 1
Q ss_pred ---------C-CCcEEEeccccC-CCCCC----CCeeEEEeccccccccCC--hHHHHHHHHHhccCCeEEEE
Q 008262 319 ---------G-APAMVAAFATRR-LPYPS----QAFDLIHCSRCRINWTRD--DGILLLEVNRMLRAGGYFAW 374 (572)
Q Consensus 319 ---------g-~~~~~~~~d~e~-LPfp~----~sFDlI~ss~~l~hw~~d--~~~~L~ei~RvLKPGG~lv~ 374 (572)
+ ....+...|+.+ ++..+ ..||+|+.....-.-.++ ...+|.++.|+|||||.|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0 111233344333 44322 279999975321111112 25799999999999999874
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.16 E-value=0.0023 Score=61.97 Aligned_cols=93 Identities=9% Similarity=-0.038 Sum_probs=58.8
Q ss_pred CCCEEEEECCCCchhHHHhcc---CCeEEEeCCccchHHHHHHHHHHcCC--C--cEEEeccccC---------------
Q 008262 274 HIRVVMDAGCGVASFGAYLLP---RNVITMSIAPKDVHENQIQFALERGA--P--AMVAAFATRR--------------- 331 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~---~~V~gvDiSp~dl~~a~~~~A~~rg~--~--~~~~~~d~e~--------------- 331 (572)
+.++|||+|||. .+..|++ .+|+++|.++.....++..++ +.+. . ..+...++..
T Consensus 30 ~a~~VLEiGtGy--STl~lA~~~~g~VvtvE~d~~~~~~ar~~l~-~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSGG--STVVAAELPGKHVTSVESDRAWARMMKAWLA-ANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCSH--HHHHHHTSTTCEEEEEESCHHHHHHHHHHHH-HSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECchH--HHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 357999999963 4444433 489999999977655554443 4453 2 2233333221
Q ss_pred CC--------C-CCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 332 LP--------Y-PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 332 LP--------f-p~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
++ . ..++||+|+.-.- .....+..+.+.|+|||.+++.
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEEe
Confidence 22 1 2378999997632 2246677788999999999765
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.97 E-value=0.0016 Score=68.77 Aligned_cols=99 Identities=12% Similarity=0.025 Sum_probs=62.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCC-------------CcEEEeccccC-C---
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-------------PAMVAAFATRR-L--- 332 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~-------------~~~~~~~d~e~-L--- 332 (572)
.++++||-||.|.|..++++++. +|+.+|+.+..+ +.+++.-. ...+...|... +
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VV-----e~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~ 278 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-----DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 278 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-----HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHH-----HHHHhhchhhhhhhhccccccceeeehHHHHHHHHhh
Confidence 35689999999999999998875 688999998655 33333210 01222223211 1
Q ss_pred CCCCCCeeEEEeccccccccCCh---------HHHHHHHHHhccCCeEEEEEE
Q 008262 333 PYPSQAFDLIHCSRCRINWTRDD---------GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 333 Pfp~~sFDlI~ss~~l~hw~~d~---------~~~L~ei~RvLKPGG~lv~st 376 (572)
.-..+.||+|+.-..-.....++ ..+++.++++|+|||.++...
T Consensus 279 ~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 279 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 11246799999753211111111 367888999999999998864
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.86 E-value=0.02 Score=58.30 Aligned_cols=113 Identities=17% Similarity=0.166 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCC-cEEEec-c
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAF-A 328 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~-~~~~~~-d 328 (572)
....+.++.+... ..+..+||||||++|.|+.+.+.. .|+|+|+......+.+ .....+.. ..+... |
T Consensus 79 ~~~KL~ei~~~~~----l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~--~~~ql~w~lV~~~~~~D 152 (321)
T 3lkz_A 79 GTAKLRWLVERRF----LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ--LVQSYGWNIVTMKSGVD 152 (321)
T ss_dssp HHHHHHHHHHTTS----CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC--CCCBTTGGGEEEECSCC
T ss_pred HHHHHHHHHHhcC----CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc--hhhhcCCcceEEEeccC
Confidence 3344555555422 245679999999999999977766 6999999875220000 00011111 122222 4
Q ss_pred ccCCCCCCCCeeEEEeccccccccCChH-------HHHHHHHHhccCC-eEEEEEEC
Q 008262 329 TRRLPYPSQAFDLIHCSRCRINWTRDDG-------ILLLEVNRMLRAG-GYFAWAAQ 377 (572)
Q Consensus 329 ~e~LPfp~~sFDlI~ss~~l~hw~~d~~-------~~L~ei~RvLKPG-G~lv~st~ 377 (572)
...++- ..+|+|+|.-. .-..++. .+|.-+.+.|++| |-|++-.+
T Consensus 153 v~~l~~--~~~D~ivcDig--eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 153 VFYRPS--ECCDTLLCDIG--ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp TTSSCC--CCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred HhhCCC--CCCCEEEEECc--cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEc
Confidence 455543 66999998643 2223331 3556667889999 99999865
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.44 E-value=0.0067 Score=60.02 Aligned_cols=112 Identities=16% Similarity=0.109 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCc-EEEec-c
Q 008262 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA-MVAAF-A 328 (572)
Q Consensus 255 ~~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~-~~~~~-d 328 (572)
....+.++.+.. .+ .+..+||||||++|.|+.+.+.. .|+|+|+......+.+ ..+..|.+. .+... |
T Consensus 63 a~~KL~ei~ek~-~l---~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~--~~~s~gwn~v~fk~gvD 136 (267)
T 3p8z_A 63 GSAKLQWFVERN-MV---IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV--PMSTYGWNIVKLMSGKD 136 (267)
T ss_dssp HHHHHHHHHHTT-SS---CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC--CCCCTTTTSEEEECSCC
T ss_pred HHHHHHHHHHhc-CC---CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc--hhhhcCcCceEEEeccc
Confidence 334455555544 22 45679999999999999977765 7999999875321000 011123333 23333 5
Q ss_pred ccCCCCCCCCeeEEEeccccccccCChH-------HHHHHHHHhccCCeEEEEEEC
Q 008262 329 TRRLPYPSQAFDLIHCSRCRINWTRDDG-------ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 329 ~e~LPfp~~sFDlI~ss~~l~hw~~d~~-------~~L~ei~RvLKPGG~lv~st~ 377 (572)
...++ ...+|.|+|... . -..++. .+|.-+.+.|++ |-|++-.+
T Consensus 137 v~~~~--~~~~DtllcDIg-e-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl 187 (267)
T 3p8z_A 137 VFYLP--PEKCDTLLCDIG-E-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVL 187 (267)
T ss_dssp GGGCC--CCCCSEEEECCC-C-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEES
T ss_pred eeecC--CccccEEEEecC-C-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEc
Confidence 45554 367999999743 3 333331 355666788998 78888765
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.35 E-value=0.018 Score=63.32 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=72.9
Q ss_pred HHHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc-----------------CCeEEEeCCccchHHHHHHHHHHc
Q 008262 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----------------RNVITMSIAPKDVHENQIQFALER 318 (572)
Q Consensus 256 ~~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~-----------------~~V~gvDiSp~dl~~a~~~~A~~r 318 (572)
...++.|.+++. .....+|+|-.||+|.|.....+ ..++|+|+.+.+..-+.......
T Consensus 203 ~~Vv~lmv~l~~----p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh- 277 (530)
T 3ufb_A 203 RPVVRFMVEVMD----PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH- 277 (530)
T ss_dssp HHHHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhhc----cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc-
Confidence 355666666665 34567899999999988654422 26899999987765555444443
Q ss_pred CCC-cEEEeccccCCCC----CCCCeeEEEecccccccc--------------CCh-HHHHHHHHHhcc-------CCeE
Q 008262 319 GAP-AMVAAFATRRLPY----PSQAFDLIHCSRCRINWT--------------RDD-GILLLEVNRMLR-------AGGY 371 (572)
Q Consensus 319 g~~-~~~~~~d~e~LPf----p~~sFDlI~ss~~l~hw~--------------~d~-~~~L~ei~RvLK-------PGG~ 371 (572)
+.. ..+...|.-..|+ ....||+|+++.-+..-. .+. -.++..+.+.|| +||+
T Consensus 278 g~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr 357 (530)
T 3ufb_A 278 GLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGR 357 (530)
T ss_dssp TCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCE
T ss_pred CCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCce
Confidence 332 2333334333332 235799999987642110 011 146777888887 7999
Q ss_pred EEEEEC
Q 008262 372 FAWAAQ 377 (572)
Q Consensus 372 lv~st~ 377 (572)
+.+..+
T Consensus 358 ~avVlP 363 (530)
T 3ufb_A 358 AAVVVP 363 (530)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 998864
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.32 E-value=0.0096 Score=62.46 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=66.7
Q ss_pred CCCCEEEEECCCCchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCC-------CcEEEeccccCCC-CCCCCee
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA-------PAMVAAFATRRLP-YPSQAFD 340 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~-------~~~~~~~d~e~LP-fp~~sFD 340 (572)
.++.+|||+.+|.|.=+.+|++. .|+++|+++.-+.... +.....+. ...+...|...++ ...+.||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~-~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQ-KILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHH-HHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHH-HHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 56789999999999777666654 6999999987553332 22222222 2234444544443 3457899
Q ss_pred EEEecc-cc------cc------ccCCh----------HHHHHHHHHhccCCeEEEEEECCC
Q 008262 341 LIHCSR-CR------IN------WTRDD----------GILLLEVNRMLRAGGYFAWAAQPV 379 (572)
Q Consensus 341 lI~ss~-~l------~h------w~~d~----------~~~L~ei~RvLKPGG~lv~st~P~ 379 (572)
.|++.. |. .. |.... ..+|..+.+.|||||.|+.+|-..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 999522 11 11 10000 267888999999999999998433
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.93 E-value=0.013 Score=59.29 Aligned_cols=55 Identities=15% Similarity=0.197 Sum_probs=39.9
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHH
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFAL 316 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~ 316 (572)
..++.+.+... .++..|||++||+|.++..++.. +++|+|+++.++..+..+...
T Consensus 223 ~l~~~~i~~~~-----~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 223 ELAERLVRMFS-----FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHC-----CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 44555555443 35679999999999988777654 899999999888665544443
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.75 E-value=0.0042 Score=79.85 Aligned_cols=99 Identities=12% Similarity=0.181 Sum_probs=45.5
Q ss_pred CCCEEEEECCCCchhHHHhcc---------CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC-CCCCCCCeeEEE
Q 008262 274 HIRVVMDAGCGVASFGAYLLP---------RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR-LPYPSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~---------~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~-LPfp~~sFDlI~ 343 (572)
+..+||+||.|+|..+..+.+ .+++..|+|+.....++.++.. +.......|.+. -++..++||+|+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---~di~~~~~d~~~~~~~~~~~ydlvi 1316 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---LHVTQGQWDPANPAPGSLGKADLLV 1316 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---HTEEEECCCSSCCCC-----CCEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---cccccccccccccccCCCCceeEEE
Confidence 356899999999976554321 1577789988766444433322 111111112222 234567899999
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
++.+ +|-..+....|.+++++|||||++++..
T Consensus 1317 a~~v-l~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1317 CNCA-LATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EECC---------------------CCEEEEEE
T ss_pred Eccc-ccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 9877 5666788899999999999999998875
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.56 E-value=0.042 Score=56.00 Aligned_cols=96 Identities=14% Similarity=0.007 Sum_probs=60.8
Q ss_pred CCCCEEEEECC------CCchhH-HHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEE
Q 008262 273 HHIRVVMDAGC------GVASFG-AYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGC------GtG~~a-~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ 343 (572)
..+.+|||+|+ -.|++. +.+... .|+++|+.+... ....+...|+..+.. .+.||+|+
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s------------da~~~IqGD~~~~~~-~~k~DLVI 174 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS------------DADSTLIGDCATVHT-ANKWDLII 174 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC------------SSSEEEESCGGGEEE-SSCEEEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc------------CCCeEEEcccccccc-CCCCCEEE
Confidence 46789999996 566643 334443 689999988532 122345556544332 47899999
Q ss_pred eccc---cccccC------Ch-HHHHHHHHHhccCCeEEEEEECCCCC
Q 008262 344 CSRC---RINWTR------DD-GILLLEVNRMLRAGGYFAWAAQPVYK 381 (572)
Q Consensus 344 ss~~---l~hw~~------d~-~~~L~ei~RvLKPGG~lv~st~P~~~ 381 (572)
|-.. .-+... .. +.++.=+.++|+|||.|++-.+-+.+
T Consensus 175 SDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 175 SDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp ECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred ecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 8542 111111 12 35666678899999999999875555
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=94.73 E-value=0.026 Score=57.27 Aligned_cols=79 Identities=22% Similarity=0.180 Sum_probs=51.2
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC---
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP--- 333 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP--- 333 (572)
++++.+.+. ..+...+||.+||.|..+..|+++ .|+|+|.++.++..+.. .+. ....+...+...++
T Consensus 11 l~e~le~L~----~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 11 YQEALDLLA----VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp HHHHHHHHT----CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHH
T ss_pred HHHHHHhhC----CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHH
Confidence 444555554 245679999999999999999886 79999999987754432 211 12333333444432
Q ss_pred --CCCCCeeEEEec
Q 008262 334 --YPSQAFDLIHCS 345 (572)
Q Consensus 334 --fp~~sFDlI~ss 345 (572)
...++||.|++.
T Consensus 83 ~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 83 AALGVERVDGILAD 96 (285)
T ss_dssp HHTTCSCEEEEEEE
T ss_pred HHcCCCCcCEEEeC
Confidence 123579999964
No 300
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.23 E-value=0.35 Score=49.47 Aligned_cols=88 Identities=18% Similarity=0.109 Sum_probs=60.3
Q ss_pred CCCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.++.+||-+|+|. |.++.++++. +|++++.++..+ +.+++.|....+ .+.+.+ . +.+|+|+-...
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-----~~~~~lGa~~v~--~~~~~~--~-~~~D~vid~~g- 243 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-----QDALSMGVKHFY--TDPKQC--K-EELDFIISTIP- 243 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTH-----HHHHHTTCSEEE--SSGGGC--C-SCEEEEEECCC-
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHhcCCCeec--CCHHHH--h-cCCCEEEECCC-
Confidence 5678999999874 6666666653 799998887644 566677765544 222332 2 27999995422
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
....+.++.++|++||.+++...
T Consensus 244 ------~~~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 ------THYDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ------SCCCHHHHHTTEEEEEEEEECCC
T ss_pred ------cHHHHHHHHHHHhcCCEEEEECC
Confidence 11257788899999999998753
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.91 E-value=0.37 Score=47.55 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=33.5
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhcc--CCeEEEeCCccch
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP--RNVITMSIAPKDV 307 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~--~~V~gvDiSp~dl 307 (572)
..++++.+... .++..|||..||+|+.+..... ++++|+|+++..+
T Consensus 200 ~l~~~~i~~~~-----~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~ 247 (260)
T 1g60_A 200 DLIERIIRASS-----NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYV 247 (260)
T ss_dssp HHHHHHHHHHC-----CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHH
T ss_pred HHHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHH
Confidence 44555554433 4568999999999987766654 4899999998655
No 302
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.62 E-value=0.38 Score=49.61 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=59.5
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC----C-CCCCCCeeEE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR----L-PYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~----L-Pfp~~sFDlI 342 (572)
.+..+||-+|||. |.++.++++. .|+++|.++. +.+.+++.|....+... .+. + ....+.+|+|
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~~vi~~~-~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVES-----RLELAKQLGATHVINSK-TQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHH-----HHHHHHHHTCSEEEETT-TSCHHHHHHHHTTSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH-----HHHHHHHcCCCEEecCC-ccCHHHHHHHhcCCCCcEE
Confidence 4678999999985 7777776653 4888887754 33566666654333211 111 1 1122379999
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+-... ....+.++.++|++||.+++..
T Consensus 263 id~~g-------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 263 LESTG-------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EECSC-------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EECCC-------CHHHHHHHHHHHhcCCEEEEeC
Confidence 95422 1467889999999999998875
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.68 E-value=0.58 Score=48.83 Aligned_cols=96 Identities=17% Similarity=0.070 Sum_probs=60.4
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-C-----C-CCCCee
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-P-----Y-PSQAFD 340 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-P-----f-p~~sFD 340 (572)
.++.+||-+|||. |.++.+++.. +|+++|.++. ..+++++.|.. ......+.+ . . ....||
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~--~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE-----RLKLLSDAGFE--TIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHH-----HHHHHHTTTCE--EEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-----HHHHHHHcCCc--EEcCCCcchHHHHHHHHhCCCCCC
Confidence 4678999999986 7777776653 6899988764 33566666652 222211111 0 0 123699
Q ss_pred EEEeccccccc--------cCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINW--------TRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw--------~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+-... ... ..+....+.++.++|++||.+++..
T Consensus 257 vvid~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 257 CGVDAVG-FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEECSC-TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred EEEECCC-CccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 9996432 111 0123457899999999999998764
No 304
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=87.38 E-value=0.81 Score=46.91 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=58.7
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc--cc----CCC-CCCCCee
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFA--TR----RLP-YPSQAFD 340 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d--~e----~LP-fp~~sFD 340 (572)
.++.+||-+|+|. |.++.+++.. +|+++|.++. ..+++++.|....+.... .+ .+. ...+.+|
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D 244 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSAT-----RLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPE 244 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-----HHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCC
Confidence 4678999999874 7776666542 6888887753 336677777653332110 00 110 0015699
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+-... ....+.++.++|++||.+++..
T Consensus 245 ~vid~~g-------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 245 VTIECTG-------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp EEEECSC-------CHHHHHHHHHHSCTTCEEEECS
T ss_pred EEEECCC-------ChHHHHHHHHHhcCCCEEEEEe
Confidence 9995421 1457888999999999998864
No 305
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=87.04 E-value=0.6 Score=43.33 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=53.7
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC----C-C-CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR----L-P-YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~----L-P-fp~~sFDl 341 (572)
.++++||.+|+ |.|..+..++.. +|+++|.++... +.+++.+... ........ + . ...+.+|+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-----~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-----EMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-----HHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeE
Confidence 46789999995 345555444432 788888765422 3444445432 22211111 0 0 11246999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.++...
T Consensus 111 vi~~~g--------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 111 VLNSLA--------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEECCC--------THHHHHHHHTEEEEEEEEECS
T ss_pred EEECCc--------hHHHHHHHHHhccCCEEEEEc
Confidence 996421 256889999999999998764
No 306
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=87.03 E-value=1.1 Score=45.72 Aligned_cols=40 Identities=10% Similarity=0.035 Sum_probs=28.1
Q ss_pred CCCCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEE
Q 008262 334 YPSQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFA 373 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv 373 (572)
+.+..||+|+--...-.-.++. ..+|++++++++|||.|+
T Consensus 182 l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 182 VENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp CCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred hcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 3445799999754322222222 589999999999999885
No 307
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.74 E-value=0.79 Score=47.45 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=57.6
Q ss_pred CCCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc---ccCCCCCCCCeeEEEec
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFA---TRRLPYPSQAFDLIHCS 345 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d---~e~LPfp~~sFDlI~ss 345 (572)
.++.+||-+|+|. |.++.+++.. +|++++.++..+ +.+++.|....+...+ .+.+. +.+|+|+..
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~-----~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~ 264 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-----EAAKALGADEVVNSRNADEMAAHL---KSFDFILNT 264 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGH-----HHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHcCCcEEeccccHHHHHHhh---cCCCEEEEC
Confidence 4678999999974 6666666653 789999887644 4555566543322111 11221 579999964
Q ss_pred cccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 346 ~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.. . ...+.++.++|++||.++...
T Consensus 265 ~g-~------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 265 VA-A------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CS-S------CCCHHHHHTTEEEEEEEEECC
T ss_pred CC-C------HHHHHHHHHHhccCCEEEEec
Confidence 22 1 124677889999999998764
No 308
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=85.89 E-value=1.5 Score=44.80 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=58.1
Q ss_pred CCCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CC---CCCe
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YP---SQAF 339 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp---~~sF 339 (572)
.++.+||-+|+|. |.++..++.. +|+++|.++. ..+.+++.|....+...+.+.+. .. .+.+
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-----RLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHH-----HHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCC
Confidence 4678999999874 6666666553 6888887754 33566666755332211101110 01 2469
Q ss_pred eEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 340 DLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 340 DlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+|+.... ....+.++.++|++||.++...
T Consensus 242 D~vid~~g-------~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 242 NVTIDCSG-------NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SEEEECSC-------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CEEEECCC-------CHHHHHHHHHHHhcCCEEEEEe
Confidence 99985421 1456888999999999998864
No 309
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=85.75 E-value=1 Score=46.84 Aligned_cols=96 Identities=16% Similarity=0.106 Sum_probs=61.0
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC-----CC--CCCCCee
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR-----LP--YPSQAFD 340 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~-----LP--fp~~sFD 340 (572)
.++.+||-+|||. |.++.++++. .|+++|.++. ..+++++.|.. ......+. +. .....+|
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA-----RLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHH-----HHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCC
Confidence 4678999999875 7777777653 5888887754 34677777753 22211111 10 1124699
Q ss_pred EEEeccccc---------cccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRI---------NWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~---------hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+-..... |. .++...+.++.++|++||.+++..
T Consensus 257 vvid~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKH-EAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGS-BCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCCcccccccccccc-cchHHHHHHHHHHHhcCCEEEEec
Confidence 999653211 11 233568999999999999998764
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.60 E-value=1.9 Score=44.51 Aligned_cols=92 Identities=21% Similarity=0.153 Sum_probs=59.4
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc------cC-CCCCCCCee
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT------RR-LPYPSQAFD 340 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~------e~-LPfp~~sFD 340 (572)
.++.+||-+|+|. |.++..++.. .|+++|.++. ..+.+++.|....+...+. .. .....+.+|
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQAT-----KRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHH-----HHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-----HHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCC
Confidence 4678999999874 6666666553 6788877754 3466777776543321110 01 012234799
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+-.. .....+.++.++|++||.+++..
T Consensus 256 vvid~~-------G~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 256 VVIECA-------GVAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEECS-------CCHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECC-------CCHHHHHHHHHHhccCCEEEEEe
Confidence 999542 12567899999999999998874
No 311
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=85.47 E-value=1 Score=46.02 Aligned_cols=91 Identities=13% Similarity=0.113 Sum_probs=59.3
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-----C-CCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-----P-YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-----P-fp~~sFDl 341 (572)
.++.+||-+|+|. |.++.+++.. .|+++|.++. ..+.+++.|....+... .+++ . .....+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~-~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKH-----CCDIALEYGATDIINYK-NGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHH-----HHHHHHHHTCCEEECGG-GSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHH-----HHHHHHHhCCceEEcCC-CcCHHHHHHHHcCCCCCCE
Confidence 4678899999875 6777766654 6888887653 34667777764333211 1111 0 12346999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+-... ....+.++.++|++||.++...
T Consensus 239 v~d~~g-------~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 239 VVIAGG-------DVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEECSS-------CTTHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC-------ChHHHHHHHHHHhcCCEEEEec
Confidence 995421 1357888999999999998875
No 312
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=85.07 E-value=1.3 Score=45.06 Aligned_cols=91 Identities=22% Similarity=0.143 Sum_probs=56.4
Q ss_pred CCCCEEEEECCC--CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeE
Q 008262 273 HHIRVVMDAGCG--VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCG--tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDl 341 (572)
.++.+||-+|+| .|..+..++.. +|++++.++..+ +.+++.|....+... .+.+. .....+|+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-----~~~~~lga~~~~~~~-~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT-----EELLRLGAAYVIDTS-TAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH-----HHHHHHTCSEEEETT-TSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHhCCCcEEEeCC-cccHHHHHHHHhCCCCCcE
Confidence 567899999997 46666666543 899999887644 455555654332211 11110 12347999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|+.+.. ...+.+..++|++||.+++...
T Consensus 217 vid~~g--------~~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 217 AIDSIG--------GPDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEESSC--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEECCC--------ChhHHHHHHHhcCCCEEEEEee
Confidence 996432 2233445589999999988753
No 313
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=84.98 E-value=0.73 Score=46.28 Aligned_cols=85 Identities=20% Similarity=0.176 Sum_probs=55.5
Q ss_pred CCCCEEEEECCC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.++.+||-+|+| .|.++.++++. +|++++ ++... +++++.|....+ . |.+.+ .+.+|+|+-...
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~-----~~~~~lGa~~v~-~-d~~~v---~~g~Dvv~d~~g- 208 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQ-----ALAAKRGVRHLY-R-EPSQV---TQKYFAIFDAVN- 208 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCH-----HHHHHHTEEEEE-S-SGGGC---CSCEEEEECC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhH-----HHHHHcCCCEEE-c-CHHHh---CCCccEEEECCC-
Confidence 567899999996 36777766654 899998 76544 556666653333 2 33444 568999995321
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
...+.++.++|++||.++...
T Consensus 209 -------~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 -------SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ------------TTGGGEEEEEEEEEEC
T ss_pred -------chhHHHHHHHhcCCCEEEEEe
Confidence 122366789999999998874
No 314
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=84.91 E-value=0.61 Score=48.60 Aligned_cols=51 Identities=12% Similarity=-0.033 Sum_probs=36.0
Q ss_pred HHHHHHHHhcccccc--CCCCCEEEEECCCCchhHHHhccC----CeEEEeCCccch
Q 008262 257 QYLDQIAKMVPDITW--GHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDV 307 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~--~~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiSp~dl 307 (572)
..+++|.+.+..... ..+...|||||.|.|.++..|+++ +|+++++....+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~ 95 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLY 95 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHH
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHH
Confidence 445666666541100 013578999999999999999853 799999998654
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=84.39 E-value=0.76 Score=46.68 Aligned_cols=91 Identities=16% Similarity=0.117 Sum_probs=59.9
Q ss_pred CCCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC----CCCCCeeEEEe
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP----YPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP----fp~~sFDlI~s 344 (572)
.++.+||-+|+|. |.++.+++.. +|+++|.++. ..+.+++.|....+...+ +.+. -..+.+|+|+-
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~g~~d~vid 238 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDA-----KLNLARRLGAEVAVNARD-TDPAAWLQKEIGGAHGVLV 238 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHH-----HHHHHHHTTCSEEEETTT-SCHHHHHHHHHSSEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHH-----HHHHHHHcCCCEEEeCCC-cCHHHHHHHhCCCCCEEEE
Confidence 4678999999974 7777777654 7999987764 336677777544332111 1110 01136899885
Q ss_pred ccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
... ....+.++.++|++||.+++..
T Consensus 239 ~~g-------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 239 TAV-------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SSC-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred eCC-------CHHHHHHHHHHhccCCEEEEeC
Confidence 321 2568899999999999998874
No 316
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=84.38 E-value=1.1 Score=45.22 Aligned_cols=90 Identities=16% Similarity=0.141 Sum_probs=54.6
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCCC-----CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRLP-----YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~LP-----fp~~sFDl 341 (572)
.+.++||-+|| |.|..+..++.. +|+++|.++..+ +.+++.+.... ..... +.+. ...+.+|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-----~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-----AYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-----HHHHHTTCSEE-EETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHhcCCcEE-EecCCHHHHHHHHHHHhCCCCeE
Confidence 46689999998 455555555432 788888765332 44444454322 22111 1110 11257999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.+++..
T Consensus 218 vi~~~g--------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 218 YFDNVG--------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCC--------hHHHHHHHHHHhcCCEEEEEe
Confidence 996532 235788999999999998764
No 317
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=83.83 E-value=2.4 Score=42.44 Aligned_cols=87 Identities=21% Similarity=0.169 Sum_probs=57.3
Q ss_pred EEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-CCCCCCeeEEEecccccc
Q 008262 277 VVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-PYPSQAFDLIHCSRCRIN 350 (572)
Q Consensus 277 ~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-Pfp~~sFDlI~ss~~l~h 350 (572)
+||=+|+ |.|.++.++++. +|++++.++... +.+++.|....+...+.... ....+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~-----~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g--- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH-----GYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG--- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-----HHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC---
Confidence 3999997 357777777654 899999887543 55666665443322221111 123457999885421
Q ss_pred ccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 351 WTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 351 w~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
...+.++.++|+++|.++...
T Consensus 221 -----~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 221 -----DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp -----HHHHHHHHHTEEEEEEEEECC
T ss_pred -----cHHHHHHHHHHhcCCEEEEEe
Confidence 238899999999999998874
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.69 E-value=1.7 Score=44.76 Aligned_cols=92 Identities=14% Similarity=0.037 Sum_probs=59.7
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc-ccCC-----CCCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFA-TRRL-----PYPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d-~e~L-----Pfp~~sFDl 341 (572)
.+..+||-+|+|. |.++..+++. .|+++|.++..+ +++++.|....+...+ .+.+ ....+.+|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~-----~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY-----ETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH-----HHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-----HHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCE
Confidence 4668899999973 6666666653 699998887533 5677666544322111 0111 012347999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCC-eEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAG-GYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPG-G~lv~st 376 (572)
|+-... ....+.++.++|++| |.+++..
T Consensus 267 vid~~g-------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 267 SFECIG-------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp EEECSC-------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC-------CHHHHHHHHHHhhccCCEEEEEc
Confidence 995421 246789999999997 9998875
No 319
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=83.42 E-value=0.61 Score=46.88 Aligned_cols=43 Identities=21% Similarity=0.254 Sum_probs=31.2
Q ss_pred CCCCCeeEEEeccccccc-------------------cCChHHHHHHHHHhccCCeEEEEEE
Q 008262 334 YPSQAFDLIHCSRCRINW-------------------TRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~hw-------------------~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+++++||+|+++.-.... ......++.++.|+|||||.+++..
T Consensus 36 l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 36 FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 467899999998654321 0112357789999999999998874
No 320
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=83.14 E-value=3.6 Score=42.28 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=55.2
Q ss_pred CCCEEEEECCCCchhHHHhcc--CCeEEEeCCccchHHHHHHHHHHcC----------------------CCcEEEeccc
Q 008262 274 HIRVVMDAGCGVASFGAYLLP--RNVITMSIAPKDVHENQIQFALERG----------------------APAMVAAFAT 329 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~--~~V~gvDiSp~dl~~a~~~~A~~rg----------------------~~~~~~~~d~ 329 (572)
+...|+.+|||.......|.. .++.-+|+.-.++-+.+.+...+.+ ........|.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 457899999999998888875 3444444432233333333332220 1122333343
Q ss_pred cCCC--------C-CCCCeeEEEeccccccccCCh-HHHHHHHHHhccCCeEEEEEE
Q 008262 330 RRLP--------Y-PSQAFDLIHCSRCRINWTRDD-GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 330 e~LP--------f-p~~sFDlI~ss~~l~hw~~d~-~~~L~ei~RvLKPGG~lv~st 376 (572)
.+.. . ..+...++++-.++..+.++. ..+|+.+.+.+ |+|.+++.+
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 3321 1 234567888765544443333 36677777766 788776543
No 321
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=83.09 E-value=2.3 Score=43.68 Aligned_cols=92 Identities=11% Similarity=-0.013 Sum_probs=58.9
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCC-----CCCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRL-----PYPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~L-----Pfp~~sFDl 341 (572)
.++.+||-+|+|. |.++.++++. .|+++|.++..+ +++++.|....+...+. +.+ ....+.+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-----~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dv 264 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-----PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDY 264 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-----HHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-----HHHHHcCCcEEEecccccchHHHHHHHHhCCCCCE
Confidence 4678999999874 6666666653 588998877543 56666665433211110 111 011247999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCC-eEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAG-GYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPG-G~lv~st 376 (572)
|+-... ....+.++.++|++| |.+++..
T Consensus 265 vid~~g-------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 265 AVECAG-------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp EEECSC-------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred EEECCC-------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 995421 145788999999999 9998765
No 322
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=83.02 E-value=0.98 Score=46.47 Aligned_cols=90 Identities=19% Similarity=0.113 Sum_probs=58.1
Q ss_pred CCCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeEE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDlI 342 (572)
.++.+||-+|+|. |.++..++.. +|+++|.++. ..+.+++.|....+. .+.+.+. .....+|+|
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE-----KLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCch-----hHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEE
Confidence 5678999999874 6666666543 7888887654 335666667644332 1111110 123479999
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.... ...+.++.++|++||.+++..
T Consensus 262 id~~g--------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 262 LEIAG--------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEETT--------SSCHHHHHHHEEEEEEEEEEC
T ss_pred EECCC--------hHHHHHHHHHhhcCCEEEEEe
Confidence 96422 235778889999999999875
No 323
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=82.23 E-value=2.1 Score=43.95 Aligned_cols=92 Identities=12% Similarity=0.049 Sum_probs=58.1
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCCC-----CCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRLP-----YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~LP-----fp~~sFDl 341 (572)
.++.+||-+|+|. |.++..++.. .|+++|.++..+ +.+++.|....+...+. +.+. ...+.+|+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-----~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~ 265 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-----EKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDF 265 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-----HHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-----HHHHHhCCceEEeccccchhHHHHHHHHhCCCCCE
Confidence 4668999999874 6666666542 588998877544 55666665432211110 1110 11247999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCC-eEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAG-GYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPG-G~lv~st 376 (572)
|+-... ....+.++.++|++| |.+++..
T Consensus 266 vid~~g-------~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 266 SLECVG-------NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp EEECSC-------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC-------CHHHHHHHHHHhhcCCcEEEEEc
Confidence 995421 145788999999999 9998864
No 324
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=82.05 E-value=2.7 Score=43.15 Aligned_cols=92 Identities=12% Similarity=-0.017 Sum_probs=58.0
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCC-----CCCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRL-----PYPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~L-----Pfp~~sFDl 341 (572)
.+..+||-+|+|. |.++.+++.. .|+++|.++..+ +.+++.|....+...+. +.+ ....+.+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-----~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF-----AKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-----HHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-----HHHHHhCCceEecccccchhHHHHHHHHhCCCCcE
Confidence 4668999999874 6666666542 588888877543 55666665432211110 111 011247999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCC-eEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAG-GYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPG-G~lv~st 376 (572)
|+-... ....+.++.++|++| |.+++..
T Consensus 265 vid~~g-------~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 265 SFEVIG-------RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp EEECSC-------CHHHHHHHHHHBCTTTCEEEECS
T ss_pred EEECCC-------CHHHHHHHHHHhhcCCcEEEEec
Confidence 985421 145788999999999 9998764
No 325
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=81.69 E-value=2.7 Score=43.17 Aligned_cols=92 Identities=13% Similarity=0.008 Sum_probs=58.2
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCC-----CCCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRL-----PYPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~L-----Pfp~~sFDl 341 (572)
.++.+||-+|+|. |.++.+++.. .|+++|.++..+ +.+++.|....+...+. +.+ ....+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~-----~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~ 263 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF-----ARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDY 263 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-----HHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-----HHHHHcCCceEeccccccccHHHHHHHHhCCCCCE
Confidence 4678999999874 6666666543 588998877543 45556665433211110 111 011247999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCC-eEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAG-GYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPG-G~lv~st 376 (572)
|+-... ....+.++.++|+++ |.+++..
T Consensus 264 vid~~g-------~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 264 SFECIG-------NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp EEECSC-------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC-------cHHHHHHHHHhhccCCcEEEEEe
Confidence 995421 145788999999999 9998864
No 326
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=81.07 E-value=4.1 Score=40.46 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=36.1
Q ss_pred CCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHH
Q 008262 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEM 393 (572)
Q Consensus 335 p~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~P~~~tl~EL~~~w~~~ 393 (572)
+...||+|+.-. . +.......+..+...|+|||++++... ........+++|.++
T Consensus 179 ~~~~~dlv~ID~--D-~Y~~t~~~le~~~p~l~~GGvIv~DD~-~~~~w~G~~~A~~ef 233 (257)
T 3tos_A 179 PQTVIALAYFDL--D-LYEPTKAVLEAIRPYLTKGSIVAFDEL-DNPKWPGENIAMRKV 233 (257)
T ss_dssp TTCCEEEEEECC--C-CHHHHHHHHHHHGGGEEEEEEEEESST-TCTTCTHHHHHHHHH
T ss_pred CCCceEEEEEcC--c-ccchHHHHHHHHHHHhCCCcEEEEcCC-CCCCChHHHHHHHHH
Confidence 456799999753 2 223335789999999999999999863 221222446666544
No 327
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=80.92 E-value=1.8 Score=43.85 Aligned_cols=91 Identities=13% Similarity=0.059 Sum_probs=55.5
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHH-HcCCCcEEEeccccCCC-----CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFAL-ERGAPAMVAAFATRRLP-----YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~-~rg~~~~~~~~d~e~LP-----fp~~sFDl 341 (572)
.++.+||-+|+ |.|..+..++.. +|++++.++. ..+.++ +.|....+...+.+.+. ...+.+|+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~-----~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE-----KVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcE
Confidence 46689999997 456666665543 7888887653 234454 34543222111111110 01256999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.+++..
T Consensus 229 vi~~~g--------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 229 YFENVG--------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 996532 247888999999999998764
No 328
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=80.72 E-value=1.4 Score=44.88 Aligned_cols=91 Identities=12% Similarity=0.118 Sum_probs=56.4
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc-ccCCC-----CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFA-TRRLP-----YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d-~e~LP-----fp~~sFDl 341 (572)
.+..+||-+|+ |.|..+..++.. +|++++.++..+ +.+++.+....+ ... .+.+. ...+.+|+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-----~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~D~ 241 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-----ELFRSIGGEVFI-DFTKEKDIVGAVLKATDGGAHG 241 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-----HHHHHTTCCEEE-ETTTCSCHHHHHHHHHTSCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-----HHHHHcCCceEE-ecCccHhHHHHHHHHhCCCCCE
Confidence 46689999998 356665555442 788888776533 445555543222 211 11110 01126999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ....+.++.+.|++||.++...
T Consensus 242 vi~~~g-------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 242 VINVSV-------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEECSS-------CHHHHHHHTTSEEEEEEEEECC
T ss_pred EEECCC-------cHHHHHHHHHHHhcCCEEEEEe
Confidence 996532 1467889999999999998765
No 329
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=80.47 E-value=1.3 Score=44.69 Aligned_cols=90 Identities=14% Similarity=0.121 Sum_probs=56.5
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHH-HHcCCCcEEEeccccCCC-----CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFA-LERGAPAMVAAFATRRLP-----YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A-~~rg~~~~~~~~d~e~LP-----fp~~sFDl 341 (572)
.++++||-+|+ |.|..+..++.. +|++++.++. ..+.+ ++.+....+...+ +.+. ...+.+|+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAE-----KCRFLVEELGFDGAIDYKN-EDLAAGLKRECPKGIDV 221 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTTCCSEEEETTT-SCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHcCCCEEEECCC-HHHHHHHHHhcCCCceE
Confidence 46789999998 356666665543 7888887754 23444 4555433221111 1110 11357999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.+.|++||.+++..
T Consensus 222 vi~~~g--------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 222 FFDNVG--------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCC--------cchHHHHHHHHhhCCEEEEEe
Confidence 996432 247889999999999998864
No 330
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=80.43 E-value=1.9 Score=43.76 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=59.8
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----C-CCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----Y-PSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----f-p~~sFDl 341 (572)
.+..+||-+|+|. |.++.++++. +|+++|.++. ..+.+++.|....+... +.+. . ....+|+
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~-----~~~~~~~lGa~~~i~~~--~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDD-----RLALAREVGADAAVKSG--AGAADAIRELTGGQGATA 242 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHH-----HHHHHHHTTCSEEEECS--TTHHHHHHHHHGGGCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-----HHHHHHHcCCCEEEcCC--CcHHHHHHHHhCCCCCeE
Confidence 4678999999874 6666666542 7999988764 34677777765433211 1110 0 1237999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+-... ....+.++.++|++||.+++..
T Consensus 243 v~d~~G-------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 243 VFDFVG-------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEESSC-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEECCC-------CHHHHHHHHHHHhcCCEEEEEC
Confidence 995421 2458899999999999998875
No 331
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=79.96 E-value=0.71 Score=47.43 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=56.8
Q ss_pred CCCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC--CCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL--PYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L--Pfp~~sFDlI~ss~ 346 (572)
.++.+||-+|+|. |.++..++.. +|++++.++..+ +++++.|....+...+...+ ... +.+|+|+...
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~-----~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~ 251 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-----EDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCA 251 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTH-----HHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-----HHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECC
Confidence 4578999999863 6666666553 799999887644 45555665433321111010 011 4799999653
Q ss_pred ccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 347 ~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
... ....+.++.++|++||.++...
T Consensus 252 g~~-----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 252 SSL-----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp SCS-----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CCC-----cHHHHHHHHHHhcCCCEEEEec
Confidence 210 0123556788999999998764
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=79.52 E-value=3 Score=42.90 Aligned_cols=92 Identities=12% Similarity=0.003 Sum_probs=58.2
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCCC-----CCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRLP-----YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~LP-----fp~~sFDl 341 (572)
.++.+||-+|+|. |.++.++++. .|+++|.++.-+ +.+++.|....+...+. +.+. ...+.+|+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-----~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dv 268 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF-----PKAKALGATDCLNPRELDKPVQDVITELTAGGVDY 268 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-----HHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-----HHHHHhCCcEEEccccccchHHHHHHHHhCCCccE
Confidence 4678999999873 6666666543 588998877543 56666665432211110 1110 11237999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCC-eEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAG-GYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPG-G~lv~st 376 (572)
|+-... ....+.++.++|++| |.+++..
T Consensus 269 vid~~G-------~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 269 SLDCAG-------TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp EEESSC-------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred EEECCC-------CHHHHHHHHHHhhcCCCEEEEEC
Confidence 985421 146788999999999 9998764
No 333
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=79.33 E-value=5.1 Score=40.82 Aligned_cols=89 Identities=13% Similarity=0.065 Sum_probs=56.1
Q ss_pred CEEEEECCCC-chhH-HHhc-cC---C-eEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC----CCCCCCeeEEEe
Q 008262 276 RVVMDAGCGV-ASFG-AYLL-PR---N-VITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL----PYPSQAFDLIHC 344 (572)
Q Consensus 276 ~~VLDIGCGt-G~~a-~~L~-~~---~-V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L----Pfp~~sFDlI~s 344 (572)
.+||-+|+|. |.++ .+++ +. + |++++.++.. ....+++++.|.... ....+.+ .. .+.||+|+-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~--~~~~~~~~~lGa~~v--~~~~~~~~~i~~~-~gg~Dvvid 248 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRP--DPTIDIIEELDATYV--DSRQTPVEDVPDV-YEQMDFIYE 248 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSS--CHHHHHHHHTTCEEE--ETTTSCGGGHHHH-SCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCccc--HHHHHHHHHcCCccc--CCCccCHHHHHHh-CCCCCEEEE
Confidence 8999999863 6777 7777 54 5 9999987640 002255666664322 2111110 01 237999985
Q ss_pred ccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
... ....+.++.++|++||.++...
T Consensus 249 ~~g-------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 249 ATG-------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCC-------ChHHHHHHHHHHhcCCEEEEEe
Confidence 421 1357889999999999998875
No 334
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=78.74 E-value=1.7 Score=43.22 Aligned_cols=86 Identities=14% Similarity=0.167 Sum_probs=55.0
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc----ccCCCCCCCCeeEEE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFA----TRRLPYPSQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d----~e~LPfp~~sFDlI~ 343 (572)
.++.+||-+|+ |.|..+..++.. +|++++.++..+ +.+++.|....+...+ .+.+ +.+|+|+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~-----~~~~~~ga~~~~~~~~~~~~~~~~----~~~d~vi 194 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-----ALPLALGAEEAATYAEVPERAKAW----GGLDLVL 194 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-----HHHHHTTCSEEEEGGGHHHHHHHT----TSEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHhcCCCEEEECCcchhHHHHh----cCceEEE
Confidence 45689999998 356666665543 789998876544 4455555443222111 0112 5799999
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
. .. . ..+.++.++|+++|.++...
T Consensus 195 d-~g-----~---~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 195 E-VR-----G---KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp E-CS-----C---TTHHHHHTTEEEEEEEEEC-
T ss_pred E-CC-----H---HHHHHHHHhhccCCEEEEEe
Confidence 6 32 1 25788899999999998764
No 335
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=77.62 E-value=3.1 Score=42.80 Aligned_cols=66 Identities=15% Similarity=0.118 Sum_probs=40.9
Q ss_pred CEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC---CCCCCeeEEEecc
Q 008262 276 RVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP---YPSQAFDLIHCSR 346 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP---fp~~sFDlI~ss~ 346 (572)
.+|||+-||.|.++..+... .|.++|+++..+ +..+.+.....+...|+..+. ++...+|+|+...
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~-----~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVAN-----EVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHH-----HHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHH-----HHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 47999999999888777653 478898877533 222222222223444565553 1112689999765
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=77.28 E-value=3.8 Score=41.47 Aligned_cols=90 Identities=16% Similarity=0.143 Sum_probs=56.3
Q ss_pred CCCCEEEEECCC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----CCCCCeeEEE
Q 008262 273 HHIRVVMDAGCG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----YPSQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----fp~~sFDlI~ 343 (572)
.+..+||-+|+| .|.++..++.. +|++++.++. ..+.+++.|....+ ....+.+. .. +.+|+|+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~~~-d~~~~~~~~~~~~~~-~~~d~vi 235 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDE-----KLELAKELGADLVV-NPLKEDAAKFMKEKV-GGVHAAV 235 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH-----HHHHHHHTTCSEEE-CTTTSCHHHHHHHHH-SSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHCCCCEEe-cCCCccHHHHHHHHh-CCCCEEE
Confidence 456899999986 46666665543 7888887754 33556666653222 11111100 01 4699998
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.... ....+.++.++|++||.++...
T Consensus 236 d~~g-------~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 236 VTAV-------SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp ESSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-------CHHHHHHHHHHhhcCCEEEEec
Confidence 6422 1457888999999999998764
No 337
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=77.25 E-value=3.5 Score=41.40 Aligned_cols=87 Identities=17% Similarity=0.236 Sum_probs=55.0
Q ss_pred EEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc--cCC-CCCCCCeeEEEecccc
Q 008262 277 VVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT--RRL-PYPSQAFDLIHCSRCR 348 (572)
Q Consensus 277 ~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~--e~L-Pfp~~sFDlI~ss~~l 348 (572)
+||-+|+ |.|.++..++.. +|++++.++..+ +.+++.|....+...+. +.+ ....+.+|+|+....
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-----~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA-----DYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH-----HHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC-
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc-
Confidence 7999997 356666666543 789988876533 45555565433321111 111 122357999986422
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
...+.++.++|++||.+++..
T Consensus 227 -------~~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 227 -------GKQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp -------THHHHHHHTTEEEEEEEEECC
T ss_pred -------HHHHHHHHHhhcCCCEEEEEe
Confidence 136888999999999998864
No 338
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=77.11 E-value=2.9 Score=41.95 Aligned_cols=87 Identities=22% Similarity=0.238 Sum_probs=53.6
Q ss_pred EEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc--cCC-CCCCCCeeEEEecccc
Q 008262 277 VVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT--RRL-PYPSQAFDLIHCSRCR 348 (572)
Q Consensus 277 ~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~--e~L-Pfp~~sFDlI~ss~~l 348 (572)
+||-+|+ |.|.++.+++.. +|++++.++..+ +.+++.|....+...+. +.+ ....+.+|+|+-...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-----~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g- 225 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-----DYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG- 225 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-----HHHHHTTCSEEEECC---------CCSCCEEEEEECST-
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCc-
Confidence 6999997 456776666543 799998876543 45555665432221111 111 122357999985422
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
. ..+.++.++|++||.+++..
T Consensus 226 ----~---~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 226 ----G---RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp ----T---TTHHHHHHTEEEEEEEEECS
T ss_pred ----H---HHHHHHHHhhccCCEEEEEe
Confidence 1 25778889999999998764
No 339
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.07 E-value=15 Score=38.09 Aligned_cols=93 Identities=8% Similarity=-0.077 Sum_probs=58.3
Q ss_pred CCEEEEECCCCchhHHHhccCCeEEEeCCccchHHHHHHHHHHcCCCc--EEEeccccCCCCCCCCeeEEEecccccccc
Q 008262 275 IRVVMDAGCGVASFGAYLLPRNVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~~V~gvDiSp~dl~~a~~~~A~~rg~~~--~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~ 352 (572)
..+||.|+.+.|.++..|+...++.+.-|-. -+.+..+.....++.. +......+. ..+.||+|+.. +.
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~-----lp 109 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHKPYSIGDSYI-SELATRENLRLNGIDESSVKFLDSTAD---YPQQPGVVLIK-----VP 109 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGCCEEEESCHH-HHHHHHHHHHHTTCCGGGSEEEETTSC---CCSSCSEEEEE-----CC
T ss_pred CCCEEEECCCCCHHHHhhccCCceEEEhHHH-HHHHHHHHHHHcCCCccceEecccccc---cccCCCEEEEE-----cC
Confidence 3579999999999998888777777743332 2223333344445532 111111222 34679998843 33
Q ss_pred CCh---HHHHHHHHHhccCCeEEEEEE
Q 008262 353 RDD---GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 353 ~d~---~~~L~ei~RvLKPGG~lv~st 376 (572)
... ...|.++...|+||+.+++..
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 333 467788888899999998875
No 340
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=75.74 E-value=3.4 Score=46.31 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=27.5
Q ss_pred CCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEEE
Q 008262 336 SQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAW 374 (572)
Q Consensus 336 ~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~ 374 (572)
+..||.++.....-+-.++. ..+|.++.++++|||.+.-
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 46899999755333332332 6899999999999998753
No 341
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=75.68 E-value=2.2 Score=44.23 Aligned_cols=46 Identities=13% Similarity=0.268 Sum_probs=35.8
Q ss_pred HHHHHHhccccccCCCCCEEEEECCCCchhHHHhccC-----CeEEEeCCccchH
Q 008262 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVH 308 (572)
Q Consensus 259 i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~ 308 (572)
++++.+.|. ..++..++|..||.|..+..++++ .|+|+|.++.++.
T Consensus 46 l~Evl~~L~----i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~ 96 (347)
T 3tka_A 46 LDEAVNGLN----IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIA 96 (347)
T ss_dssp THHHHHHTC----CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHH
T ss_pred HHHHHHhhC----CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHH
Confidence 455555554 356789999999999999888765 6999999987663
No 342
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=75.50 E-value=2.2 Score=43.40 Aligned_cols=90 Identities=19% Similarity=0.182 Sum_probs=56.1
Q ss_pred CCCEEEEECCCC-chhHHHhc-----cCCeEEEeCCccchHHHHHHHHHHcCCCcEEEecc----ccCCCCCCCCeeEEE
Q 008262 274 HIRVVMDAGCGV-ASFGAYLL-----PRNVITMSIAPKDVHENQIQFALERGAPAMVAAFA----TRRLPYPSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGt-G~~a~~L~-----~~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d----~e~LPfp~~sFDlI~ 343 (572)
++.+||-+|+|. |.++.+++ ..+|+++|.++. ..+++++.|....+...+ .+.+. ....+|+|+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vi 243 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKK-----HRDFALELGADYVSEMKDAESLINKLT-DGLGASIAI 243 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHH-----HHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHH-----HHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEE
Confidence 568999999973 55555544 336888887654 335666666543321111 01111 123799999
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.... ....+.++.++|++||.++...
T Consensus 244 d~~g-------~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 244 DLVG-------TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp ESSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-------ChHHHHHHHHHhhcCCEEEEeC
Confidence 6422 1457889999999999998864
No 343
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=75.49 E-value=2.2 Score=43.02 Aligned_cols=90 Identities=11% Similarity=0.086 Sum_probs=56.8
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDl 341 (572)
.++.+||-+|+ |.|..+..++.. +|++++.++. ..+.+++.|....+. ...+.+. .....+|+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPE-----KAAHAKALGAWETID-YSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHH-----HHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHcCCCEEEe-CCCccHHHHHHHHhCCCCceE
Confidence 56789999993 356666666554 7888887654 335566666443222 1111110 12347999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.+++..
T Consensus 213 vid~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 213 VYDGVG--------QDTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEESSC--------GGGHHHHHTTEEEEEEEEECC
T ss_pred EEECCC--------hHHHHHHHHHhcCCCEEEEEe
Confidence 996532 135778899999999999875
No 344
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=75.29 E-value=1.4 Score=45.05 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=32.2
Q ss_pred CCCCCeeEEEecccccc-------------ccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 334 YPSQAFDLIHCSRCRIN-------------WTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 334 fp~~sFDlI~ss~~l~h-------------w~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+++++||+|++..-... |.......|.++.|+|||||.+++..
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 45789999998864321 11124578999999999999999985
No 345
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=74.94 E-value=3.1 Score=42.24 Aligned_cols=89 Identities=15% Similarity=0.175 Sum_probs=56.2
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDl 341 (572)
.++.+||-+|+ |.|.++..++.. +|++++.++..+ +.+++.|....+ ... +.+. .....+|+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-----~~~~~~ga~~v~-~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-----EFVKSVGADIVL-PLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-----HHHHHHTCSEEE-ESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHhcCCcEEe-cCc-hhHHHHHHHHhCCCCceE
Confidence 46789999997 356666666543 789998877544 455555544322 111 1110 12237999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.+.|++||.+++..
T Consensus 231 vid~~g--------~~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 231 VVDPIG--------GPAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEESCC----------CHHHHHHTEEEEEEEEEC-
T ss_pred EEECCc--------hhHHHHHHHhhcCCCEEEEEE
Confidence 996532 125778899999999998874
No 346
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=74.78 E-value=3 Score=42.66 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=54.9
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC----C--CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL----P--YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L----P--fp~~sFDl 341 (572)
.+..+||-+|+ |.|..+..++.. +|++++.++.. .+.+++.+....+ ....+.+ . .....+|+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~-----~~~~~~~ga~~~~-d~~~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-----QKIVLQNGAHEVF-NHREVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-----HHHHHHTTCSEEE-ETTSTTHHHHHHHHHCTTCEEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHcCCCEEE-eCCCchHHHHHHHHcCCCCcEE
Confidence 46789999997 345555555443 78888877542 2455555543222 1111110 0 11246999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.+++..
T Consensus 243 vi~~~G--------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 243 IIEMLA--------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEESCH--------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC--------hHHHHHHHHhccCCCEEEEEe
Confidence 996532 236788899999999998764
No 347
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=74.27 E-value=2.5 Score=42.60 Aligned_cols=90 Identities=18% Similarity=0.119 Sum_probs=56.5
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDl 341 (572)
.++.+||-+|+ |.|..+..++.. +|++++.++. ..+.+++.|....+.. ..+.+. .....+|+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~~ga~~~~~~-~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE-----KLKIAKEYGAEYLINA-SKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTTCSEEEET-TTSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHcCCcEEEeC-CCchHHHHHHHHhCCCCceE
Confidence 56789999994 345666555543 7888887653 3356666664432221 111110 12346999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+..+.++|++||.+++..
T Consensus 221 vid~~g--------~~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 221 SFDSVG--------KDTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEECCG--------GGGHHHHHHHEEEEEEEEECC
T ss_pred EEECCC--------hHHHHHHHHHhccCCEEEEEc
Confidence 996532 146788889999999998874
No 348
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=73.49 E-value=3 Score=42.24 Aligned_cols=90 Identities=17% Similarity=0.123 Sum_probs=55.6
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC----CC--CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR----LP--YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~----LP--fp~~sFDl 341 (572)
.+..+||-+|+ |.|..+..++.. +|++++.++..+ +.+++.+....+ ....+. +. .....+|+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~-----~~~~~~ga~~~~-d~~~~~~~~~~~~~~~~~~~d~ 238 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL-----RRAKALGADETV-NYTHPDWPKEVRRLTGGKGADK 238 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-----HHHHHHTCSEEE-ETTSTTHHHHHHHHTTTTCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHhcCCCEEE-cCCcccHHHHHHHHhCCCCceE
Confidence 46789999998 567766666543 788888775433 444445543322 211111 00 11247999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|+++|.+++..
T Consensus 239 vi~~~g--------~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 239 VVDHTG--------ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEESSC--------SSSHHHHHHHEEEEEEEEESS
T ss_pred EEECCC--------HHHHHHHHHhhccCCEEEEEe
Confidence 996532 125778889999999998764
No 349
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=72.92 E-value=5.5 Score=40.86 Aligned_cols=89 Identities=15% Similarity=0.218 Sum_probs=57.7
Q ss_pred CCCEEEEEC-CC-CchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc-----ccCCCCCCCCeeEE
Q 008262 274 HIRVVMDAG-CG-VASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFA-----TRRLPYPSQAFDLI 342 (572)
Q Consensus 274 ~~~~VLDIG-CG-tG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d-----~e~LPfp~~sFDlI 342 (572)
++.+||-+| +| .|.++..+++. +|++++.++. ..+.+++.|....+...+ ... ...+.+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~-----~~~~~~~lGad~vi~~~~~~~~~v~~--~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPE-----TQEWVKSLGAHHVIDHSKPLAAEVAA--LGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHH-----HHHHHHHTTCSEEECTTSCHHHHHHT--TCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHH-----HHHHHHHcCCCEEEeCCCCHHHHHHH--hcCCCceEE
Confidence 567899998 55 47776666542 7888887653 346667766543321110 111 234579999
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+... .....+.++.++|++||.+++..
T Consensus 244 id~~-------g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 244 FSTT-------HTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EECS-------CHHHHHHHHHHHSCTTCEEEECS
T ss_pred EECC-------CchhhHHHHHHHhcCCCEEEEEC
Confidence 8542 22467889999999999998763
No 350
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=72.83 E-value=1.5 Score=44.97 Aligned_cols=91 Identities=18% Similarity=0.126 Sum_probs=53.7
Q ss_pred CCCEEEEECCC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHH-HcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 274 HIRVVMDAGCG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFAL-ERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 274 ~~~~VLDIGCG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~-~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
++.+||-+|+| .|.++.+++.. +|++++.++..+ +.++ +.|....+...+.+.+.-..+.+|+|+-...
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~-----~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g- 253 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKR-----EEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVP- 253 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHH-----HHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHH-----HHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCC-
Confidence 56899999986 35666666543 788888876422 4444 4554333221111111000136999995422
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
. ...+.++.++|++||.++...
T Consensus 254 ~------~~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 254 V------HHALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp S------CCCSHHHHTTEEEEEEEEECS
T ss_pred C------hHHHHHHHHHhccCCEEEEeC
Confidence 1 123566788999999998864
No 351
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=72.46 E-value=2.7 Score=42.69 Aligned_cols=91 Identities=13% Similarity=0.164 Sum_probs=55.2
Q ss_pred CCCCEEEEECCCC--chhHHHhc----cCCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-----CCCC-CCee
Q 008262 273 HHIRVVMDAGCGV--ASFGAYLL----PRNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-----PYPS-QAFD 340 (572)
Q Consensus 273 ~~~~~VLDIGCGt--G~~a~~L~----~~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-----Pfp~-~sFD 340 (572)
.+.++||-+|+|. |..+..++ ..+|+++|.++..+ +.+++.+....+...+ +.. .... +.+|
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~-----~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d 242 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-----EAAKRAGADYVINASM-QDPLAEIRRITESKGVD 242 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-----HHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH-----HHHHHhCCCEEecCCC-ccHHHHHHHHhcCCCce
Confidence 4678999999984 44444443 33688888776433 4445555433221111 110 0112 4799
Q ss_pred EEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 341 lI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+.+.. ....+.++.++|++||.+++..
T Consensus 243 ~vi~~~g-------~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 243 AVIDLNN-------SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEESCC-------CHHHHTTGGGGEEEEEEEEECC
T ss_pred EEEECCC-------CHHHHHHHHHHHhcCCEEEEEC
Confidence 9996422 1457888899999999998864
No 352
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=72.46 E-value=9.1 Score=38.92 Aligned_cols=92 Identities=10% Similarity=0.029 Sum_probs=56.6
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc---ccC----CC--CCCCC
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFA---TRR----LP--YPSQA 338 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d---~e~----LP--fp~~s 338 (572)
.++.+||-+|+|. |.++.++++. .|+++|.++..+ +++++..........+ .++ +- .....
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-----~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL-----KFAKEICPEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH-----HHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-----HHHHHhchhcccccccccchHHHHHHHHHHhCCCC
Confidence 4668899999874 6676666654 488998876433 4555442122111110 011 00 12357
Q ss_pred eeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 339 FDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 339 FDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+|+-... ....+.++.++|++||.+++..
T Consensus 253 ~Dvvid~~g-------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 253 PAVALECTG-------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp CSEEEECSC-------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCEEEECCC-------ChHHHHHHHHHhcCCCEEEEEc
Confidence 999995421 2457889999999999999875
No 353
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=72.21 E-value=4.6 Score=41.00 Aligned_cols=90 Identities=13% Similarity=0.068 Sum_probs=56.2
Q ss_pred CCCEEEEECCCC-chhHHHhcc---C-CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeEE
Q 008262 274 HIRVVMDAGCGV-ASFGAYLLP---R-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDLI 342 (572)
Q Consensus 274 ~~~~VLDIGCGt-G~~a~~L~~---~-~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDlI 342 (572)
++.+||-+|+|. |.++..++. . +|+++|.++. ..+.+++.|....+ ....+.+. .....+|+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~-----~~~~~~~~Ga~~~~-~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDF-----RRELAKKVGADYVI-NPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH-----HHHHHHHHTCSEEE-CTTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-----HHHHHHHhCCCEEE-CCCCcCHHHHHHHHcCCCCCCEE
Confidence 567899999963 566655554 3 7888887753 33556666653322 11111110 112369999
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.... ....+.++.++|++||.++...
T Consensus 241 id~~g-------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 241 LEFSG-------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EECSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC-------CHHHHHHHHHHHhcCCEEEEEc
Confidence 96422 1467888999999999998764
No 354
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=71.70 E-value=3.3 Score=42.75 Aligned_cols=92 Identities=26% Similarity=0.402 Sum_probs=57.3
Q ss_pred CCCCEEEEECCC-CchhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEec---c---ccCCC-C-CCCCe
Q 008262 273 HHIRVVMDAGCG-VASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAPAMVAAF---A---TRRLP-Y-PSQAF 339 (572)
Q Consensus 273 ~~~~~VLDIGCG-tG~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~---d---~e~LP-f-p~~sF 339 (572)
.++.+||-+|+| .|.++.+++. .+|++++.++. ..+.+++.|....+... + .+.+. . ....+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPN-----RLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHH-----HHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHH-----HHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCC
Confidence 456899999976 3666666654 27888887754 33566666654333211 0 00110 1 12369
Q ss_pred eEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 340 DLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 340 DlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+|+-... ....+.++.++|++||.++...
T Consensus 269 Dvvid~~g-------~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 269 DFILEATG-------DSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp EEEEECSS-------CTTHHHHHHHHEEEEEEEEECC
T ss_pred cEEEECCC-------CHHHHHHHHHHHhcCCEEEEEe
Confidence 99995422 1346788899999999998875
No 355
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=71.63 E-value=28 Score=35.11 Aligned_cols=100 Identities=17% Similarity=0.134 Sum_probs=56.5
Q ss_pred CCEEEEECCCCchhHHHhcc-C--CeEEEeCCccchHHHHHHHHHHcC---CC-cEEEeccccC-----C---CCCCCCe
Q 008262 275 IRVVMDAGCGVASFGAYLLP-R--NVITMSIAPKDVHENQIQFALERG---AP-AMVAAFATRR-----L---PYPSQAF 339 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~-~--~V~gvDiSp~dl~~a~~~~A~~rg---~~-~~~~~~d~e~-----L---Pfp~~sF 339 (572)
.+.|++||||-=..+..+.. . .++-+|. |..+ +...+...+.+ .. ..+...|..+ + .|....-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi-~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVL-AYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHH-HHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHH-HHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCC
Confidence 46799999999888888763 2 5666673 4333 32323333221 11 2233334433 1 0111223
Q ss_pred eEEEeccccccccCCh--HHHHHHHHHhccCCeEEEEEEC
Q 008262 340 DLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 340 DlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~st~ 377 (572)
=++++-.+ +++.++. ..+++.+...+.||+++++...
T Consensus 181 t~~i~Egv-l~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 181 TAWLAEGL-LMYLPATAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp EEEEECSC-GGGSCHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEEEech-HhhCCHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 35555544 5554443 4788888888899999999853
No 356
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=70.32 E-value=3.4 Score=41.46 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=54.1
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC----C--CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL----P--YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L----P--fp~~sFDl 341 (572)
.+.++||-+|+ |.|..+..++.. +|+++|.++..+ +.+++.+....+ ....+.+ . ...+.+|+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~-----~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-----QSALKAGAWQVI-NYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-----HHHHHHTCSEEE-ETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHcCCCEEE-ECCCccHHHHHHHHhCCCCceE
Confidence 46789999994 455555555443 788888765322 444444543222 2111110 0 11246999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.+++..
T Consensus 213 vi~~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 213 VYDSVG--------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEECSC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred EEECCc--------hHHHHHHHHHhcCCCEEEEEe
Confidence 996532 346788899999999998764
No 357
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=69.99 E-value=7.4 Score=40.47 Aligned_cols=92 Identities=14% Similarity=0.078 Sum_probs=55.4
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDl 341 (572)
.++.+||=+|+|. |.++..++.. .|+++|.++. ..+++++.|....+. ...+.+. .....+|+
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~~~~lGa~~vi~-~~~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEV-----RRNLAKELGADHVID-PTKENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHH-----HHHHHHHHTCSEEEC-TTTSCHHHHHHHHTTTCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-----HHHHHHHcCCCEEEc-CCCCCHHHHHHHHhCCCCCCE
Confidence 5678999999864 6666666543 6888887753 346677777543321 1111110 12346999
Q ss_pred EEeccccccccCChHHHHHHHHHhc----cCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRML----RAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvL----KPGG~lv~st 376 (572)
|+-.. ......+..+.++| ++||.+++..
T Consensus 286 vid~~------g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 286 FLEAT------GVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEECS------SCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEECC------CCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 99542 22223555555666 9999999875
No 358
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=69.77 E-value=5.6 Score=40.38 Aligned_cols=88 Identities=16% Similarity=0.268 Sum_probs=55.0
Q ss_pred CCCEEEEEC-CC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-----CCCCCCeeEEE
Q 008262 274 HIRVVMDAG-CG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-----PYPSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIG-CG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-----Pfp~~sFDlI~ 343 (572)
++.+||-+| +| .|.++..++.. +|++++.++. ..+.+++.|....+. .. +.+ ....+.+|+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~vi~-~~-~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE-----TIEWTKKMGADIVLN-HK-ESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH-----HHHHHHHHTCSEEEC-TT-SCHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHhcCCcEEEE-CC-ccHHHHHHHhCCCCccEEE
Confidence 568899994 44 46666666543 7888877653 345666666543221 11 110 01235799999
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
... .....+.++.++|++||.++..
T Consensus 223 d~~-------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 223 CTF-------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ESS-------CHHHHHHHHHHHEEEEEEEEES
T ss_pred ECC-------CchHHHHHHHHHhccCCEEEEE
Confidence 642 2256788999999999999764
No 359
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=69.69 E-value=4.1 Score=42.58 Aligned_cols=87 Identities=22% Similarity=0.205 Sum_probs=55.9
Q ss_pred CEEEEECCCCchhHHHhccC-CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccccccccC-
Q 008262 276 RVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWTR- 353 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~-~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~~- 353 (572)
.+||+++-+-|.++..+... +++.+.-+-.+. +.....|..... .. .+..+...||+|+.- |..
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~-~~---~~~~~~~~~d~v~~~-----~Pk~ 112 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGRMAVERLETSRAAF-----RCLTASGLQARL-AL---PWEAAAGAYDLVVLA-----LPAG 112 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTTBEEEEEECBHHHH-----HHHHHTTCCCEE-CC---GGGSCTTCEEEEEEE-----CCGG
T ss_pred CcEEEecCCCCccccccCCCCceEEEeCcHHHH-----HHHHHcCCCccc-cC---CccCCcCCCCEEEEE-----CCcc
Confidence 68999999999888777744 677664433221 113334554422 11 122235689999843 321
Q ss_pred -C---hHHHHHHHHHhccCCeEEEEEE
Q 008262 354 -D---DGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 354 -d---~~~~L~ei~RvLKPGG~lv~st 376 (572)
. ....|.++.+.|+|||.+++..
T Consensus 113 k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 113 RGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp GCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 2 3578889999999999999886
No 360
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=69.51 E-value=4.9 Score=41.16 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=56.8
Q ss_pred CCCCEEEEEC--CCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC----C-CCCCCeeEE
Q 008262 273 HHIRVVMDAG--CGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL----P-YPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIG--CGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L----P-fp~~sFDlI 342 (572)
.++.+||-+| .|.|..+..++.. +|++++.++. ..+.+++.|....+. ...+.+ . ...+.+|+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~-----~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDE-----KSAFLKSLGCDRPIN-YKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTTCSEEEE-TTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHH-----HHHHHHHcCCcEEEe-cCChhHHHHHHHhcCCCCCEE
Confidence 4568999999 3467777666543 7888887653 335566666543221 111111 0 112469999
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.+.. ...+.++.++|+++|.+++..
T Consensus 236 id~~g--------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 236 YESVG--------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EECSC--------THHHHHHHHHEEEEEEEEECC
T ss_pred EECCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 96532 257888999999999998764
No 361
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=69.02 E-value=8.8 Score=37.45 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=29.1
Q ss_pred CCCCeeEEEecccccc----cc---------CChHHHHHHHHHhccCCeEEEEEE
Q 008262 335 PSQAFDLIHCSRCRIN----WT---------RDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 335 p~~sFDlI~ss~~l~h----w~---------~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
++++||+|++..-... +. ......|.++.|+|+|||.+++..
T Consensus 20 ~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 20 ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 3578999988754211 10 012467889999999999998874
No 362
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=68.80 E-value=8.3 Score=38.79 Aligned_cols=92 Identities=13% Similarity=0.063 Sum_probs=58.3
Q ss_pred CCCCEEEEECCCC-chhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeE
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDl 341 (572)
.+..+||=+|+|. |.++..++.. .++++|.++. ..+++++.|....+...+ ...+ -....+|+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~-----k~~~a~~lGa~~~i~~~~-~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSE-----KLALAKSFGAMQTFNSSE-MSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHTTCSEEEETTT-SCHHHHHHHHGGGCSSEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHH-----HHHHHHHcCCeEEEeCCC-CCHHHHHHhhcccCCccc
Confidence 5678999999975 4555555543 4677877753 446777777654332211 1110 11245788
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
|+... -....+.++.++|++||.+++...
T Consensus 233 v~d~~-------G~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 233 ILETA-------GVPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EEECS-------CSHHHHHHHHHHCCTTCEEEECCC
T ss_pred ccccc-------cccchhhhhhheecCCeEEEEEec
Confidence 87542 125678889999999999998753
No 363
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=67.53 E-value=4.5 Score=41.25 Aligned_cols=90 Identities=17% Similarity=0.089 Sum_probs=53.9
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC----C--CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL----P--YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L----P--fp~~sFDl 341 (572)
.++.+||-+|+ |.|..+..++.. +|++++.++..+ +.+++.+....+ ....+.+ - ...+.+|+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~-----~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 234 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL-----QMAEKLGAAAGF-NYKKEDFSEATLKFTKGAGVNL 234 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHTCSEEE-ETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHcCCcEEE-ecCChHHHHHHHHHhcCCCceE
Confidence 45689999994 355555555432 788888776433 444445543222 1111110 0 12246999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.+++..
T Consensus 235 vi~~~G--------~~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 235 ILDCIG--------GSYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEESSC--------GGGHHHHHHHEEEEEEEEECC
T ss_pred EEECCC--------chHHHHHHHhccCCCEEEEEe
Confidence 996532 125778889999999998864
No 364
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=66.92 E-value=5.1 Score=41.09 Aligned_cols=91 Identities=16% Similarity=0.152 Sum_probs=52.6
Q ss_pred CCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHH-HcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 274 HIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFAL-ERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 274 ~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~-~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
++.+||-+|+|. |.++..++.. +|++++.++..+ +.+. +.|....+...+.+.+.-..+.+|+|+.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~-----~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKK-----EEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGH-----HHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 568899999863 5555555543 788888877543 3333 44543222111111110001469999964221
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
...+.++.++|++||.++...
T Consensus 262 -------~~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 262 -------VHPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp -------CCCSHHHHHHEEEEEEEEECC
T ss_pred -------HHHHHHHHHHHhcCCEEEEEc
Confidence 113556778999999998764
No 365
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=65.75 E-value=8.7 Score=40.64 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=57.6
Q ss_pred CCCCEEEEECC-C-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC--------------
Q 008262 273 HHIRVVMDAGC-G-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-------------- 333 (572)
Q Consensus 273 ~~~~~VLDIGC-G-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-------------- 333 (572)
.++.+||=+|+ | .|.++..++.. +|++++.++ ...+++++.|....+... .+++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~-----~~~~~~~~lGa~~vi~~~-~~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP-----QKAEICRAMGAEAIIDRN-AEGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHTCCEEEETT-TTTCCSEEETTEECHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH-----HHHHHHHhhCCcEEEecC-cCcccccccccccchHHHH
Confidence 56789999997 3 56677666654 678777544 344667777764433211 11110
Q ss_pred ---------CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 334 ---------YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 334 ---------fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.....+|+|+-... ...+.++.++|++||.+++..
T Consensus 301 ~~~~~i~~~t~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVFEHPG--------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEEECSC--------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHhCCCCCcEEEEcCC--------chhHHHHHHHhhCCcEEEEEe
Confidence 01247999985422 257888999999999998864
No 366
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=65.45 E-value=6.7 Score=40.92 Aligned_cols=66 Identities=12% Similarity=-0.018 Sum_probs=41.6
Q ss_pred CEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC--------CCCCeeEEEe
Q 008262 276 RVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY--------PSQAFDLIHC 344 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf--------p~~sFDlI~s 344 (572)
.++||+-||.|.++.-+... .|.++|+++... +..+.......+...|+..+.. ....+|+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~-----~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAI-----NTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHH-----HHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHH-----HHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 47999999999988777654 467899887533 2222222233344445555531 2467999997
Q ss_pred cc
Q 008262 345 SR 346 (572)
Q Consensus 345 s~ 346 (572)
..
T Consensus 78 gp 79 (376)
T 3g7u_A 78 GP 79 (376)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 367
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=64.58 E-value=10 Score=42.20 Aligned_cols=40 Identities=23% Similarity=0.153 Sum_probs=27.9
Q ss_pred CCCeeEEEeccccccccCCh--HHHHHHHHHhccCCeEEEEE
Q 008262 336 SQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 336 ~~sFDlI~ss~~l~hw~~d~--~~~L~ei~RvLKPGG~lv~s 375 (572)
...||+|+.....-.-.++. ..+|.++.++++|||.+.-.
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 46799999754322222222 58999999999999997543
No 368
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=64.55 E-value=6.9 Score=41.19 Aligned_cols=32 Identities=22% Similarity=0.201 Sum_probs=24.8
Q ss_pred CCEEEEECCCCchhHHHhcc----------C-CeEEEeCCccc
Q 008262 275 IRVVMDAGCGVASFGAYLLP----------R-NVITMSIAPKD 306 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~----------~-~V~gvDiSp~d 306 (572)
.-.|+|+|.|.|.++..+++ . +++.||+|+..
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~L 123 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVL 123 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHH
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHH
Confidence 34699999999998776642 1 68889999953
No 369
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=63.80 E-value=4.5 Score=40.82 Aligned_cols=98 Identities=10% Similarity=0.031 Sum_probs=57.6
Q ss_pred CEEEEECCCCchhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc-cCCC---CCCCCeeEEEeccccc
Q 008262 276 RVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRLP---YPSQAFDLIHCSRCRI 349 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~-e~LP---fp~~sFDlI~ss~~l~ 349 (572)
..+||+=+|+|.++..++.+ +++.+|.++.....-..++.. .....+...|. +.+. -+...||+|++-....
T Consensus 93 ~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe 170 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYE 170 (283)
T ss_dssp SSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCC
T ss_pred CCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCC
Confidence 45899999999999998876 789999988654211111111 11233333342 2121 2334699999775432
Q ss_pred cccCChHHHHHHHHH--hccCCeEEEEEE
Q 008262 350 NWTRDDGILLLEVNR--MLRAGGYFAWAA 376 (572)
Q Consensus 350 hw~~d~~~~L~ei~R--vLKPGG~lv~st 376 (572)
. ..+...++..+.+ .+.|+|.+++--
T Consensus 171 ~-k~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 171 R-KEEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp S-TTHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred C-CcHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 1 1234555555554 456888887774
No 370
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=63.30 E-value=12 Score=38.33 Aligned_cols=90 Identities=18% Similarity=0.143 Sum_probs=56.3
Q ss_pred CCCCEEEEECCC--CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-----CCCCCCeeEE
Q 008262 273 HHIRVVMDAGCG--VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-----PYPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCG--tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-----Pfp~~sFDlI 342 (572)
.++.+||=+|++ .|.++.+++.. +|+++. ++. ..+++++.|....+... .+++ ....+.+|+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~-----~~~~~~~lGa~~vi~~~-~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH-----NFDLAKSRGAEEVFDYR-APNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG-----GHHHHHHTTCSEEEETT-STTHHHHHHHHTTTCCCEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH-----HHHHHHHcCCcEEEECC-CchHHHHHHHHccCCccEE
Confidence 467899999983 67777777654 677764 543 33667777754333211 1111 0123459999
Q ss_pred EeccccccccCChHHHHHHHHHhc-cCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRML-RAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvL-KPGG~lv~st 376 (572)
+-... ....+..+.+.| |+||.++...
T Consensus 236 ~d~~g-------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 236 LDCIT-------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EESSC-------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred EECCC-------chHHHHHHHHHhhcCCCEEEEEe
Confidence 95421 246788888999 6999998764
No 371
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=63.08 E-value=7.1 Score=39.62 Aligned_cols=46 Identities=20% Similarity=0.249 Sum_probs=32.3
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhc--cCCeEEEeCCccch
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLL--PRNVITMSIAPKDV 307 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~--~~~V~gvDiSp~dl 307 (572)
..++++.+... .++..|||.-||+|+.+.... .++.+|+|+.+...
T Consensus 240 ~l~~~~i~~~~-----~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~ 287 (323)
T 1boo_A 240 KLPEFFIRMLT-----EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYV 287 (323)
T ss_dssp HHHHHHHHHHC-----CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHH
T ss_pred HHHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHH
Confidence 34555554433 466899999999997665544 45899999988543
No 372
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=61.87 E-value=5.1 Score=36.07 Aligned_cols=43 Identities=9% Similarity=0.102 Sum_probs=31.0
Q ss_pred CCCCCCCeeEEEeccccc-cccCChHHHHHHHHHhccCCeEEEE
Q 008262 332 LPYPSQAFDLIHCSRCRI-NWTRDDGILLLEVNRMLRAGGYFAW 374 (572)
Q Consensus 332 LPfp~~sFDlI~ss~~l~-hw~~d~~~~L~ei~RvLKPGG~lv~ 374 (572)
..+++++||.|+...--. +...-+..++..+.+.|||||.|..
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 346789999999643222 1112237899999999999999976
No 373
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=60.81 E-value=7.4 Score=38.94 Aligned_cols=89 Identities=19% Similarity=0.163 Sum_probs=54.4
Q ss_pred CCCCEEEEEC-CC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC-CCCCCCCeeEEEecc
Q 008262 273 HHIRVVMDAG-CG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR-LPYPSQAFDLIHCSR 346 (572)
Q Consensus 273 ~~~~~VLDIG-CG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~-LPfp~~sFDlI~ss~ 346 (572)
.++.+||=+| +| .|.++..++.. +|++++ +.. ..+.+++.|....+... .+. +.-.-+.+|+|+-..
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~-----~~~~~~~lGa~~~i~~~-~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKR-----NHAFLKALGAEQCINYH-EEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHH-----HHHHHHHHTCSEEEETT-TSCHHHHCCSCEEEEEESS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccc-----hHHHHHHcCCCEEEeCC-CcchhhhhccCCCEEEECC
Confidence 5678999997 55 47777666654 677775 321 24667777765433211 111 111114699999542
Q ss_pred ccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 347 ~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
. ...+.++.++|++||.++...
T Consensus 224 g--------~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 224 G--------GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp C--------HHHHHHHGGGEEEEEEEEECC
T ss_pred C--------cHHHHHHHHhccCCCEEEEeC
Confidence 2 233488999999999998763
No 374
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=60.47 E-value=21 Score=35.72 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=57.0
Q ss_pred CCCCEEEEECCCCc-hhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc---cCCC--CCCCCeeEE
Q 008262 273 HHIRVVMDAGCGVA-SFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFAT---RRLP--YPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGCGtG-~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~---e~LP--fp~~sFDlI 342 (572)
.++.+||=+|+|.+ .++..++. .+|+++|.++. ..+.+++.|....+...+. +.+- .....+|.+
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~-----r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~ 236 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD-----KLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSA 236 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH-----HHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH-----HhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEE
Confidence 46789999999864 34444333 27999988764 3466777776543322110 0000 122356766
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
+... -....+.+..+.|+++|.+++...
T Consensus 237 ~~~~-------~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 237 IVCA-------VARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EECC-------SCHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEec-------cCcchhheeheeecCCceEEEEec
Confidence 6431 125678899999999999988753
No 375
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=60.35 E-value=6.8 Score=39.35 Aligned_cols=90 Identities=16% Similarity=0.089 Sum_probs=54.3
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC----C--CCCCCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL----P--YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L----P--fp~~sFDl 341 (572)
.+..+||-+|+ |.|..+..++.. +|++++.++..+ +.+++.+....+ ....+.+ - .....+|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~-----~~~~~~g~~~~~-d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA-----ETARKLGCHHTI-NYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-----HHHHHHTCSEEE-ETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHcCCCEEE-ECCCHHHHHHHHHHhCCCCCeE
Confidence 46689999995 566666555443 788888775322 344444543222 1111110 0 01246999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+.+.. ...+.++.++|++||.++...
T Consensus 218 vi~~~g--------~~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 218 VYDSIG--------KDTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEECSC--------TTTHHHHHHTEEEEEEEEECC
T ss_pred EEECCc--------HHHHHHHHHhhccCCEEEEEe
Confidence 996532 145788899999999998764
No 376
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=60.17 E-value=16 Score=38.39 Aligned_cols=90 Identities=10% Similarity=0.105 Sum_probs=56.4
Q ss_pred CCCCEEEEECC-C-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC--------------
Q 008262 273 HHIRVVMDAGC-G-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-------------- 333 (572)
Q Consensus 273 ~~~~~VLDIGC-G-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-------------- 333 (572)
.++.+||-+|+ | .|.++..++.. +|++++.++. ..+.+++.|....+...+ ..+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~-----~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ-----KEAAVRALGCDLVINRAE-LGITDDIADDPRRVVETG 292 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTTCCCEEEHHH-HTCCTTGGGCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHhcCCCEEEeccc-ccccccccccccccchhh
Confidence 56789999997 3 46666666543 6787775543 345666666544332111 1110
Q ss_pred ---------CCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 334 ---------YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 334 ---------fp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.....+|+|+.+.. ...+.++.++|++||.+++..
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTG--------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSC--------HHHHHHHHHHSCTTCEEEESC
T ss_pred hHHHHHHHHHhCCCceEEEECCC--------chHHHHHHHHHhcCCEEEEEe
Confidence 01246999996422 246788899999999998874
No 377
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=60.08 E-value=27 Score=35.36 Aligned_cols=94 Identities=15% Similarity=0.085 Sum_probs=53.2
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEE-eCCccchHHHHHHHHHHcCCCcEEEecc--ccCCC-CCC--CCeeE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITM-SIAPKDVHENQIQFALERGAPAMVAAFA--TRRLP-YPS--QAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gv-DiSp~dl~~a~~~~A~~rg~~~~~~~~d--~e~LP-fp~--~sFDl 341 (572)
.++.+||-+|+ |.|.++.++++. +++++ +..+. .....+.+++.|....+...+ .+.+. ... +.+|+
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~--~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dv 243 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD--IQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRL 243 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC--HHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSE
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc--hHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceE
Confidence 46789999997 367777777654 45444 33332 122335666667544332111 11111 111 14899
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+-... ...+.+..++|++||.+++..
T Consensus 244 vid~~g--------~~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 244 ALNCVG--------GKSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp EEESSC--------HHHHHHHHTTSCTTCEEEECC
T ss_pred EEECCC--------cHHHHHHHHhhCCCCEEEEEe
Confidence 985421 223356789999999998763
No 378
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=59.46 E-value=4.9 Score=40.98 Aligned_cols=90 Identities=14% Similarity=0.101 Sum_probs=55.5
Q ss_pred CCCCEEEEECC--CCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----CCCCCeeEE
Q 008262 273 HHIRVVMDAGC--GVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----YPSQAFDLI 342 (572)
Q Consensus 273 ~~~~~VLDIGC--GtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----fp~~sFDlI 342 (572)
.+..+||-+|+ |.|..+..++.. +|++++.++.. .+.+++.|....+. ...+.+. ...+.+|+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-----~~~~~~lGa~~~~~-~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGK-----CEACERLGAKRGIN-YRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-----HHHHHHHTCSEEEE-TTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHhcCCCEEEe-CCchHHHHHHHHHhCCCceEE
Confidence 46789999953 346666665543 78998877643 35555566543322 1111110 013579999
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.+.. ...+.++.+.|++||.+++..
T Consensus 240 id~~g--------~~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 240 LDMIG--------AAYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EESCC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred EECCC--------HHHHHHHHHHhccCCEEEEEE
Confidence 96532 125778899999999998875
No 379
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=59.25 E-value=5.8 Score=40.43 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=30.4
Q ss_pred CCCCeeEEEecccccc----------ccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 335 PSQAFDLIHCSRCRIN----------WTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 335 p~~sFDlI~ss~~l~h----------w~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
++++||+|++..-... |.......|.++.|+|+|||.+++..
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4678999998764211 11123477889999999999999985
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=56.10 E-value=14 Score=37.59 Aligned_cols=87 Identities=16% Similarity=0.086 Sum_probs=53.0
Q ss_pred CCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCC------CCCeeEEEe
Q 008262 275 IRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP------SQAFDLIHC 344 (572)
Q Consensus 275 ~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp------~~sFDlI~s 344 (572)
+.+||-+|+|. |.++..++.. +|+++|.++.. ....+.+++.|... + + .. .+. .+.+|+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~--~~~~~~~~~~ga~~-v---~-~~-~~~~~~~~~~~~~d~vid 252 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPT--EVEQTVIEETKTNY-Y---N-SS-NGYDKLKDSVGKFDVIID 252 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCC--HHHHHHHHHHTCEE-E---E-CT-TCSHHHHHHHCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccc--hHHHHHHHHhCCce-e---c-hH-HHHHHHHHhCCCCCEEEE
Confidence 68999999842 4455555443 78999887610 01224555555432 1 2 11 211 146999996
Q ss_pred ccccccccCChHHHH-HHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRDDGILL-LEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d~~~~L-~ei~RvLKPGG~lv~st 376 (572)
... . ...+ .++.++|++||.+++..
T Consensus 253 ~~g-~------~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 253 ATG-A------DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp CCC-C------CTHHHHHHGGGEEEEEEEEECS
T ss_pred CCC-C------hHHHHHHHHHHHhcCCEEEEEe
Confidence 532 1 2256 88999999999998875
No 381
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=55.14 E-value=9.5 Score=38.62 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=54.8
Q ss_pred CCCCEEEEECC-C-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC------CCCCCeeE
Q 008262 273 HHIRVVMDAGC-G-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP------YPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGC-G-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP------fp~~sFDl 341 (572)
.++.+||-+|+ | .|.++..++.. +|+++ .++. ..+.+++.|... +. ..+.+. .....+|+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~-----~~~~~~~lGa~~-i~--~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGS-----DLEYVRDLGATP-ID--ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHH-----HHHHHHHHTSEE-EE--TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHH-----HHHHHHHcCCCE-ec--cCCCHHHHHHHHhcCCCceE
Confidence 46789999994 3 46666666543 67777 4442 345666666543 21 111111 12347999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+-+.. ...+.++.+.|+++|.++...
T Consensus 220 vid~~g--------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 220 VYDTLG--------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEESSC--------THHHHHHHHHEEEEEEEEESC
T ss_pred EEECCC--------cHHHHHHHHHHhcCCeEEEEc
Confidence 996422 257888999999999998764
No 382
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=54.82 E-value=12 Score=37.87 Aligned_cols=90 Identities=9% Similarity=0.047 Sum_probs=53.4
Q ss_pred CCC--CEEEEECC--CCchhHHHhcc---C-CeEEEeCCccchHHHHHHHHHH-cCCCcEEEeccccCC-----CCCCCC
Q 008262 273 HHI--RVVMDAGC--GVASFGAYLLP---R-NVITMSIAPKDVHENQIQFALE-RGAPAMVAAFATRRL-----PYPSQA 338 (572)
Q Consensus 273 ~~~--~~VLDIGC--GtG~~a~~L~~---~-~V~gvDiSp~dl~~a~~~~A~~-rg~~~~~~~~d~e~L-----Pfp~~s 338 (572)
.+. .+||-+|+ |.|..+..++. . +|++++.++. ..+.+.+ .+... ......+.+ ....+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~-----~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE-----KCILLTSELGFDA-AINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHH-----HHHHHHHHcCCce-EEecCchHHHHHHHHhcCCC
Confidence 456 89999998 34555554443 3 6888887653 2244443 44432 222111110 011226
Q ss_pred eeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 339 FDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 339 FDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+|+|+.+.. ...+.++.++|++||.+++..
T Consensus 231 ~d~vi~~~G--------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 231 VDVYFDNVG--------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEEEESCC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCEEEECCC--------HHHHHHHHHHhccCcEEEEEC
Confidence 999996532 367889999999999998764
No 383
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=54.57 E-value=7.3 Score=39.39 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=52.6
Q ss_pred CCCEEEEECCCC-chhHHHhcc---C-CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----CCCCCeeEEE
Q 008262 274 HIRVVMDAGCGV-ASFGAYLLP---R-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----YPSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGt-G~~a~~L~~---~-~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----fp~~sFDlI~ 343 (572)
++.+||-+|+|. |.++..++. . +|++++.++.. .+.+++. . ..+.....+.+. ...+.+|+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~-----~~~~~~l-a-~~v~~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYR-----LAFARPY-A-DRLVNPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHH-----HGGGTTT-C-SEEECTTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHH-----HHHHHHh-H-HhccCcCccCHHHHHHHhcCCCCCEEE
Confidence 567899999853 566655554 3 78998877532 2333332 1 112211111100 0024699999
Q ss_pred eccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
.... ....+.++.++|++||.++...
T Consensus 237 d~~g-------~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 237 EFSG-------NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp ECSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-------CHHHHHHHHHHHhcCCEEEEEe
Confidence 6422 1457888999999999998764
No 384
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=53.81 E-value=44 Score=34.00 Aligned_cols=87 Identities=14% Similarity=0.082 Sum_probs=49.6
Q ss_pred CCEEEEECCCCchhHHHhccC----C-e-EEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC---CCCCCeeEEEec
Q 008262 275 IRVVMDAGCGVASFGAYLLPR----N-V-ITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP---YPSQAFDLIHCS 345 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~-V-~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP---fp~~sFDlI~ss 345 (572)
.-+++|+-||.|.++.-+... + | .++|+++..... +....+. . +...|+..+. ++...+|+++.+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~t----y~~N~~~-~-~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKI----YSKNFKE-E-VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHH----HHHHHCC-C-CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHH----HHHHCCC-C-cccCChhhcCHHHhccCCCCEEEec
Confidence 458999999999887776554 3 4 689988753321 1111111 1 2234555553 222368999965
Q ss_pred cccccc----------cCCh-HHHHHHHHH-hcc
Q 008262 346 RCRINW----------TRDD-GILLLEVNR-MLR 367 (572)
Q Consensus 346 ~~l~hw----------~~d~-~~~L~ei~R-vLK 367 (572)
.-.-.+ ..|. ..++.++.| +++
T Consensus 84 pPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 84 PPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp CCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred CCccCcccccCCCCCCCccccchhHHHHHHHHHH
Confidence 432222 1333 367778777 553
No 385
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=51.53 E-value=12 Score=38.02 Aligned_cols=43 Identities=21% Similarity=0.301 Sum_probs=31.4
Q ss_pred HHHHHHHHhccccccCCCCCEEEEECCCCchhHHHhc--cCCeEEEeCCc
Q 008262 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLL--PRNVITMSIAP 304 (572)
Q Consensus 257 ~~i~~L~~~L~~i~~~~~~~~VLDIGCGtG~~a~~L~--~~~V~gvDiSp 304 (572)
..++.+.+... .++..|||.-||+|+.+.... .++.+|+|+.+
T Consensus 230 ~l~~~~i~~~~-----~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~ 274 (319)
T 1eg2_A 230 AVIERLVRALS-----HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAP 274 (319)
T ss_dssp HHHHHHHHHHS-----CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESST
T ss_pred HHHHHHHHHhC-----CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCc
Confidence 44555555443 467899999999997665444 56899999998
No 386
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=49.23 E-value=17 Score=38.18 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=32.8
Q ss_pred CCCCEEEEECCCCchhHHHhc-c-----CCeEEEeCCccchHHHHHHHHH
Q 008262 273 HHIRVVMDAGCGVASFGAYLL-P-----RNVITMSIAPKDVHENQIQFAL 316 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~-~-----~~V~gvDiSp~dl~~a~~~~A~ 316 (572)
.+...++|+||+.|.++..++ . .+|++++..+......+...+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 567899999999999887765 1 3799999999766544444433
No 387
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=49.16 E-value=24 Score=35.59 Aligned_cols=85 Identities=8% Similarity=0.075 Sum_probs=50.5
Q ss_pred CEEEEE-CCC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCC--------CCCeeEE
Q 008262 276 RVVMDA-GCG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP--------SQAFDLI 342 (572)
Q Consensus 276 ~~VLDI-GCG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp--------~~sFDlI 342 (572)
++||=. |+| .|.++..++.. +|++++.++..+ +.+++.|....+. . ....+. ...+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~-----~~~~~~Ga~~~~~-~--~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-----ALLKDIGAAHVLN-E--KAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH-----HHHHHHTCSEEEE-T--TSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHcCCCEEEE-C--CcHHHHHHHHHHhcCCCCcEE
Confidence 566654 433 35555555543 899998877543 4555566443221 1 111111 1369999
Q ss_pred EeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 343 ~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+-+.. ...+.++.++|++||.+++..
T Consensus 238 id~~g--------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVT--------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EESSC--------HHHHHHHHHHSCTTCEEEECC
T ss_pred EECCC--------ChhHHHHHhhhcCCCEEEEEe
Confidence 96422 234578889999999998874
No 388
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=45.88 E-value=20 Score=36.66 Aligned_cols=91 Identities=13% Similarity=0.156 Sum_probs=53.7
Q ss_pred CCCCEEEEEC-CC-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC---CCCCCeeEEEe
Q 008262 273 HHIRVVMDAG-CG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP---YPSQAFDLIHC 344 (572)
Q Consensus 273 ~~~~~VLDIG-CG-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP---fp~~sFDlI~s 344 (572)
.++.+||-+| +| .|.++..++.. +|++++ ++.. .+.+++.|....+. ...+.+. .....+|+|+.
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~-----~~~~~~lGa~~v~~-~~~~~~~~~~~~~~g~D~vid 254 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDA-----SELVRKLGADDVID-YKSGSVEEQLKSLKPFDFILD 254 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-----HHHHHHTTCSEEEE-TTSSCHHHHHHTSCCBSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHH-----HHHHHHcCCCEEEE-CCchHHHHHHhhcCCCCEEEE
Confidence 4568999999 34 56666666543 788877 5432 25566666543322 1111100 01146999985
Q ss_pred ccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 345 s~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
... .....+.+..++|++||.++...
T Consensus 255 ~~g------~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 255 NVG------GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SSC------TTHHHHGGGGBCSSSCCEEEESC
T ss_pred CCC------ChhhhhHHHHHhhcCCcEEEEeC
Confidence 422 11245677888999999998764
No 389
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=40.55 E-value=23 Score=35.78 Aligned_cols=87 Identities=13% Similarity=0.075 Sum_probs=48.4
Q ss_pred CCCCEEEEECCC--CchhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-----CCCCCCeeE
Q 008262 273 HHIRVVMDAGCG--VASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-----PYPSQAFDL 341 (572)
Q Consensus 273 ~~~~~VLDIGCG--tG~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-----Pfp~~sFDl 341 (572)
.++.+||=+|++ .|.++.+++.. .|++++ +... .+.++ .|....+. . ...+ ....+.+|+
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~-----~~~~~-~ga~~~~~-~-~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFK-----HEAIK-DSVTHLFD-R-NADYVQEVKRISAEGVDI 211 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGG-----HHHHG-GGSSEEEE-T-TSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHH-----HHHHH-cCCcEEEc-C-CccHHHHHHHhcCCCceE
Confidence 567899999983 46777777654 577766 3321 23333 44433222 1 1111 012357999
Q ss_pred EEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 342 I~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
|+-... ...+.++.++|++||.+++..
T Consensus 212 v~d~~g--------~~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 212 VLDCLC--------GDNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEECC---------------CTTEEEEEEEEEEC
T ss_pred EEECCC--------chhHHHHHHHhhcCCEEEEEC
Confidence 995421 122467889999999999875
No 390
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=37.95 E-value=24 Score=36.11 Aligned_cols=66 Identities=11% Similarity=0.027 Sum_probs=38.9
Q ss_pred CEEEEECCCCchhHHHhccC-----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC---CCCCCeeEEEecc
Q 008262 276 RVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP---YPSQAFDLIHCSR 346 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~-----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP---fp~~sFDlI~ss~ 346 (572)
-+++|+-||.|.+..-+... .|.++|+++... +.-+.+.....+...|+..+. ++...+|+++.+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~-----~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVAN-----SVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHH-----HHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHH-----HHHHHhCCCCceeccccccCCHHHhccCCCCEEEecC
Confidence 47999999999887777543 367888877432 222222222223334555553 2233689999654
No 391
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=37.83 E-value=80 Score=30.78 Aligned_cols=103 Identities=8% Similarity=0.034 Sum_probs=54.8
Q ss_pred CCCEEEEECCCCc---hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----C-----CCCC
Q 008262 274 HIRVVMDAGCGVA---SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----Y-----PSQA 338 (572)
Q Consensus 274 ~~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----f-----p~~s 338 (572)
+.++||=.|++.| .++..|+++ +|+.++.+.....+...+...+.+....+...|..+.. + .-+.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999997766 355555555 67888876643333333333334444444444432211 0 0135
Q ss_pred eeEEEeccccccccC-----Ch---H-----------HHHHHHHHhccCCeEEEEEE
Q 008262 339 FDLIHCSRCRINWTR-----DD---G-----------ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 339 FDlI~ss~~l~hw~~-----d~---~-----------~~L~ei~RvLKPGG~lv~st 376 (572)
.|+++.+........ +. . .+++.+.+.++.+|.++..+
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 788886543221111 11 1 34556677778889887763
No 392
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=36.97 E-value=1.4e+02 Score=28.34 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=36.5
Q ss_pred CEEEEECCCCchhHHHhcc----C--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEeccc
Q 008262 276 RVVMDAGCGVASFGAYLLP----R--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRC 347 (572)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~----~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~ 347 (572)
++||=+|| |.++..+.+ + +|++++-++.... .....+ ..+...|..++. -..+|.|+....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~--~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQME-----AIRASG--AEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHH-----HHHHTT--EEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhh-----hHhhCC--CeEEEecccccc--cCCCCEEEECCC
Confidence 57999995 766655543 3 7999988765331 111222 334445665555 457899886544
No 393
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=36.78 E-value=28 Score=35.34 Aligned_cols=65 Identities=12% Similarity=0.054 Sum_probs=38.8
Q ss_pred CCEEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC-CCCCeeEEEecc
Q 008262 275 IRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY-PSQAFDLIHCSR 346 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf-p~~sFDlI~ss~ 346 (572)
..++||+.||.|.++..+... .|.++|+++........++ .... ..|+..+.. .-..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~---~~~~----~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNF---GEKP----EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHH---SCCC----BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc---CCCC----cCCHHHcCHhhCCCCCEEEECC
Confidence 468999999999888877665 5778898875332211111 1111 234444321 112589999764
No 394
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=36.24 E-value=30 Score=36.85 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=28.5
Q ss_pred CCEEEEECCCCchhHHHhccC---------CeEEEeCCccchHHHHHHH
Q 008262 275 IRVVMDAGCGVASFGAYLLPR---------NVITMSIAPKDVHENQIQF 314 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~---------~V~gvDiSp~dl~~a~~~~ 314 (572)
.-+|+|+|.|+|.++..+++. +++.|++|+... +.|.+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr-~~Q~~~ 185 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELR-ARQRET 185 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSH-HHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHH-HHHHHH
Confidence 368999999999887766532 588999999644 444333
No 395
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=36.04 E-value=59 Score=32.71 Aligned_cols=95 Identities=13% Similarity=0.105 Sum_probs=53.2
Q ss_pred CCC-CEEEEECC-C-CchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc--cCC----C-C---CC
Q 008262 273 HHI-RVVMDAGC-G-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT--RRL----P-Y---PS 336 (572)
Q Consensus 273 ~~~-~~VLDIGC-G-tG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~--e~L----P-f---p~ 336 (572)
.++ .+||-+|+ | .|.++.++++. +++++.-+...+. ...+.+++.|....+...+. +++ . . ..
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~-~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD-EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH-HHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccH-HHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccC
Confidence 456 89999997 3 56777776654 6666654443211 11244555665433321110 111 0 0 12
Q ss_pred CCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 337 QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 337 ~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
+.+|+|+-... .... .++.++|++||.++...
T Consensus 244 ~g~Dvvid~~G-------~~~~-~~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 244 GEAKLALNCVG-------GKSS-TGIARKLNNNGLMLTYG 275 (364)
T ss_dssp CCEEEEEESSC-------HHHH-HHHHHTSCTTCEEEECC
T ss_pred CCceEEEECCC-------chhH-HHHHHHhccCCEEEEec
Confidence 46999995422 1223 37789999999998864
No 396
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=31.68 E-value=36 Score=35.63 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=50.4
Q ss_pred CCCEEEEECCCC-chhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEecc---------------------
Q 008262 274 HIRVVMDAGCGV-ASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFA--------------------- 328 (572)
Q Consensus 274 ~~~~VLDIGCGt-G~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d--------------------- 328 (572)
++.+|+=||+|. |..+..++.. +|+++|.++..+ +.+.+.|.. +...+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l-----~~~~~lGa~--~~~l~~~~~~~~gya~~~~~~~~~~~ 255 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVA-----EQVRSVGAQ--WLDLGIDAAGEGGYARELSEAERAQQ 255 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGH-----HHHHHTTCE--ECCCC-------------CHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHcCCe--EEeccccccccccchhhhhHHHHhhh
Confidence 567899999985 4444444332 899999988644 233333321 11100
Q ss_pred ccCCCCCCCCeeEEEeccccccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 329 TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 329 ~e~LPfp~~sFDlI~ss~~l~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
.+.+.-.-...|+|+.. +...-...+..+-+++.+.+|||+.++=.
T Consensus 256 ~~~l~e~l~~aDIVI~t-v~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 256 QQALEDAITKFDIVITT-ALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHTTCSEEEEC-CCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHHHHHhcCCEEEEC-CCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 00111011568999964 21211112222347888899998877543
No 397
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=30.91 E-value=1.3e+02 Score=28.81 Aligned_cols=102 Identities=12% Similarity=0.074 Sum_probs=53.9
Q ss_pred CCCEEEEECCCCc---hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----C-----CCCC
Q 008262 274 HIRVVMDAGCGVA---SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----Y-----PSQA 338 (572)
Q Consensus 274 ~~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----f-----p~~s 338 (572)
..+++|=.|++.| .++..|+++ +|+.++.......+...+.....+........|..+.. + .-+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998876 355566655 67777655432222222222333444444444432211 0 0136
Q ss_pred eeEEEeccccccccC----Ch---H-----------HHHHHHHHhccCCeEEEEE
Q 008262 339 FDLIHCSRCRINWTR----DD---G-----------ILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 339 FDlI~ss~~l~hw~~----d~---~-----------~~L~ei~RvLKPGG~lv~s 375 (572)
.|+++.+........ +. . .+++.+.+.|+.+|.++..
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 798887654322111 10 1 3456667778888888776
No 398
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.56 E-value=1.6e+02 Score=28.10 Aligned_cols=103 Identities=16% Similarity=0.211 Sum_probs=53.3
Q ss_pred CCCEEEEECCCCc---hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----C-----CCCC
Q 008262 274 HIRVVMDAGCGVA---SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----Y-----PSQA 338 (572)
Q Consensus 274 ~~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----f-----p~~s 338 (572)
..+++|=.|++.| .++..|+++ +|+.++.......+...+.....+....+...|..+.. + .-+.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578899997766 355555555 67666654322222222223333444444444432211 0 0135
Q ss_pred eeEEEeccccccccC----ChH--------------HHHHHHHHhccCCeEEEEEE
Q 008262 339 FDLIHCSRCRINWTR----DDG--------------ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 339 FDlI~ss~~l~hw~~----d~~--------------~~L~ei~RvLKPGG~lv~st 376 (572)
.|+++.+........ +.+ .+.+.+.+.++.+|.+++..
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 788886544322211 111 34566777888888888764
No 399
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=29.95 E-value=70 Score=31.73 Aligned_cols=93 Identities=9% Similarity=-0.035 Sum_probs=52.5
Q ss_pred EEEEECCCCchhHHHhccC---CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCC-CCCeeEEEecccccc--
Q 008262 277 VVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP-SQAFDLIHCSRCRIN-- 350 (572)
Q Consensus 277 ~VLDIGCGtG~~a~~L~~~---~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp-~~sFDlI~ss~~l~h-- 350 (572)
+|||+=||.|.+..-|.+. -|.++|+.+..... +.. . .+..+...|+..+... -..+|+++...-.-.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~t----y~~-N-~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS 75 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKT----YES-N-HSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWS 75 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHH----HHH-H-CCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHH----HHH-H-CCCCcccCChhhCCHhhCCcccEEEecCCCCCcC
Confidence 6999999999888777665 46788998854321 222 2 2333444566555421 135899986542111
Q ss_pred ------ccCChH-HHHHHH---HHhccCCeEEEEEE
Q 008262 351 ------WTRDDG-ILLLEV---NRMLRAGGYFAWAA 376 (572)
Q Consensus 351 ------w~~d~~-~~L~ei---~RvLKPGG~lv~st 376 (572)
-..|.. .++.++ .+.+||. +|++-.
T Consensus 76 ~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~EN 110 (331)
T 3ubt_Y 76 EGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAEN 110 (331)
T ss_dssp ETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEE
T ss_pred CCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeee
Confidence 113432 455544 4456886 444554
No 400
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=27.97 E-value=1.7e+02 Score=29.19 Aligned_cols=87 Identities=16% Similarity=0.209 Sum_probs=51.8
Q ss_pred CCEEEEECCCC-c-hhHHHhccC----CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 275 IRVVMDAGCGV-A-SFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 275 ~~~VLDIGCGt-G-~~a~~L~~~----~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
..+|.=||+|. | .++..|.+. +|++.|.++..+ +.+.+.|...... .+.+.+ .-...|+|+..--
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~-----~~a~~~G~~~~~~-~~~~~~--~~~~aDvVilavp- 103 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESI-----SKAVDLGIIDEGT-TSIAKV--EDFSPDFVMLSSP- 103 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH-----HHHHHTTSCSEEE-SCTTGG--GGGCCSEEEECSC-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHH-----HHHHHCCCcchhc-CCHHHH--hhccCCEEEEeCC-
Confidence 46899999884 3 566666554 588888876432 4455555432221 122210 1135799986422
Q ss_pred ccccCChHHHHHHHHHhccCCeEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFA 373 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv 373 (572)
. .....++.++...|++|..++
T Consensus 104 ~---~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 104 V---RTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp G---GGHHHHHHHHHHHSCTTCEEE
T ss_pred H---HHHHHHHHHHhhccCCCcEEE
Confidence 1 123578889999999987654
No 401
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=27.77 E-value=2.1e+02 Score=27.76 Aligned_cols=71 Identities=11% Similarity=0.182 Sum_probs=44.3
Q ss_pred CCCEEEEECCCCc---hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCC-----CCCCCCeeEEE
Q 008262 274 HIRVVMDAGCGVA---SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-----PYPSQAFDLIH 343 (572)
Q Consensus 274 ~~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~L-----Pfp~~sFDlI~ 343 (572)
+++++|=.|.+.| ..+..|++. +|+.+|.... +...+...+.+........|..+. -+..+..|+++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~---~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP---DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 5688999998888 356666665 7888887653 223344455565555554443221 13456799999
Q ss_pred eccc
Q 008262 344 CSRC 347 (572)
Q Consensus 344 ss~~ 347 (572)
.+..
T Consensus 85 NNAG 88 (247)
T 4hp8_A 85 NNAG 88 (247)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 7653
No 402
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=25.91 E-value=50 Score=28.45 Aligned_cols=89 Identities=13% Similarity=0.072 Sum_probs=50.0
Q ss_pred CEEEEECCCC-c-hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC---CC-CCCCCeeEEEeccc
Q 008262 276 RVVMDAGCGV-A-SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR---LP-YPSQAFDLIHCSRC 347 (572)
Q Consensus 276 ~~VLDIGCGt-G-~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~---LP-fp~~sFDlI~ss~~ 347 (572)
.+|+=+|||. | .++..|.+. +|+++|.++..+ +.+.+.+..... .|..+ |. ..-..+|+|++...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~-----~~~~~~g~~~i~--gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRV-----DELRERGVRAVL--GNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH-----HHHHHTTCEEEE--SCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHH-----HHHHHcCCCEEE--CCCCCHHHHHhcCcccCCEEEEECC
Confidence 5689999874 4 344445443 899999887533 344445543322 22211 11 11246898886421
Q ss_pred cccccCCh-HHHHHHHHHhccCCeEEEEEE
Q 008262 348 RINWTRDD-GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 348 l~hw~~d~-~~~L~ei~RvLKPGG~lv~st 376 (572)
.+. ...+....|.+.|+..++...
T Consensus 81 -----~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 81 -----NGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp -----CHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred -----ChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 122 233555677788888876654
No 403
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=25.63 E-value=61 Score=34.99 Aligned_cols=87 Identities=15% Similarity=0.132 Sum_probs=50.3
Q ss_pred CCCCEEEEECCCC-chhHHHhcc---CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 273 HHIRVVMDAGCGV-ASFGAYLLP---RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 273 ~~~~~VLDIGCGt-G~~a~~L~~---~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
..+++|+=+|+|. |.....++. .+|+++|.++... +.+.+.|.. .. +.+.+ . ...|+|+.....
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~-----~~A~~~Ga~--~~--~l~e~-l--~~aDvVi~atgt 339 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINA-----LQAMMEGFD--VV--TVEEA-I--GDADIVVTATGN 339 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH-----HHHHHTTCE--EC--CHHHH-G--GGCSEEEECSSS
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHcCCE--Ee--cHHHH-H--hCCCEEEECCCC
Confidence 3568999999874 433333332 2799998876432 344555542 11 11111 1 357999975321
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEEEC
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~st~ 377 (572)
.+. +-.+..+.||+||.++....
T Consensus 340 ~~~------i~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 340 KDI------IMLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp SCS------BCHHHHHHSCTTCEEEECSS
T ss_pred HHH------HHHHHHHhcCCCcEEEEeCC
Confidence 221 11356778999999987753
No 404
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=24.88 E-value=2.8e+02 Score=25.97 Aligned_cols=102 Identities=10% Similarity=0.055 Sum_probs=53.9
Q ss_pred CCCEEEEECCC--Cc---hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCC-CcEEEeccccCCC-----C-----C
Q 008262 274 HIRVVMDAGCG--VA---SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLP-----Y-----P 335 (572)
Q Consensus 274 ~~~~VLDIGCG--tG---~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~-~~~~~~~d~e~LP-----f-----p 335 (572)
..+++|=.|++ .| .++..|+++ +|+.++.+.... +...+...+.+. ...+...|..+.. + .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-KSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH-HHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 45789999976 44 355666655 788887765332 223333333332 3344444433221 0 0
Q ss_pred CCCeeEEEecccccc----c----cCChH--------------HHHHHHHHhccCCeEEEEEE
Q 008262 336 SQAFDLIHCSRCRIN----W----TRDDG--------------ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 336 ~~sFDlI~ss~~l~h----w----~~d~~--------------~~L~ei~RvLKPGG~lv~st 376 (572)
-+..|+++.+..... + ..+.. .+++.+...++.+|.+++.+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 136788886644322 0 01111 24456667778889888764
No 405
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=24.53 E-value=22 Score=36.73 Aligned_cols=96 Identities=10% Similarity=0.014 Sum_probs=48.0
Q ss_pred CCCEEEEECCCC-chhHHHhcc-C--CeEEEeCCccchHHHHHHHHHH-cCCCcEEEeccccCCCCCCCCeeEEEecccc
Q 008262 274 HIRVVMDAGCGV-ASFGAYLLP-R--NVITMSIAPKDVHENQIQFALE-RGAPAMVAAFATRRLPYPSQAFDLIHCSRCR 348 (572)
Q Consensus 274 ~~~~VLDIGCGt-G~~a~~L~~-~--~V~gvDiSp~dl~~a~~~~A~~-rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l 348 (572)
.+.+|+=+|+|. |..+..++. . +|+++|.++..+ +.+.+ .+............+.-.-..+|+|+....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l-----~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~- 240 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKL-----RQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL- 240 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHH-----HHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC-
Confidence 468899999864 333333322 2 799999876433 22222 233211111011111000125799986421
Q ss_pred ccccCChHHHHHHHHHhccCCeEEEEE
Q 008262 349 INWTRDDGILLLEVNRMLRAGGYFAWA 375 (572)
Q Consensus 349 ~hw~~d~~~~L~ei~RvLKPGG~lv~s 375 (572)
......+..+..++.+.+||||.++-.
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 111111122356777889999988655
No 406
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=24.48 E-value=66 Score=32.20 Aligned_cols=69 Identities=14% Similarity=0.082 Sum_probs=41.2
Q ss_pred CCCCEEEEECCCCchhHHHhccC--C---eEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC---C-CCCeeEEE
Q 008262 273 HHIRVVMDAGCGVASFGAYLLPR--N---VITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY---P-SQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~---V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf---p-~~sFDlI~ 343 (572)
....++||+=||.|.++..+... + |.++|+++... +.-+.+.....+...|+..+.. + ...+|+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~-----~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSI-----TVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHH-----HHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHH-----HHHHHhCCCCceeCCChHHccHHHhcccCCcCEEE
Confidence 34568999999999888777665 3 47888877432 1111222222344445555531 1 13699999
Q ss_pred ecc
Q 008262 344 CSR 346 (572)
Q Consensus 344 ss~ 346 (572)
...
T Consensus 89 ggp 91 (295)
T 2qrv_A 89 GGS 91 (295)
T ss_dssp ECC
T ss_pred ecC
Confidence 754
No 407
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=23.93 E-value=3e+02 Score=26.39 Aligned_cols=31 Identities=13% Similarity=0.106 Sum_probs=20.0
Q ss_pred CCCEEEEECCCCchhHHHh----ccC--CeEEEeCCcc
Q 008262 274 HIRVVMDAGCGVASFGAYL----LPR--NVITMSIAPK 305 (572)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L----~~~--~V~gvDiSp~ 305 (572)
+.++||=.|+ +|.++..+ +++ +|++++-+..
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~ 46 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSAS 46 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4578999985 45554444 433 7888887654
No 408
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=23.76 E-value=52 Score=33.27 Aligned_cols=90 Identities=14% Similarity=0.102 Sum_probs=51.9
Q ss_pred CCCCEEEEECCC-CchhHHHhcc----CCeEEEeCCccchHHHHHHHHHHcCCCcEEEeccc--cCC-CCC-CCCeeEEE
Q 008262 273 HHIRVVMDAGCG-VASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFAT--RRL-PYP-SQAFDLIH 343 (572)
Q Consensus 273 ~~~~~VLDIGCG-tG~~a~~L~~----~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~--e~L-Pfp-~~sFDlI~ 343 (572)
.++.+||-+|+| .|.++.+++. .+|+++|.++. ..+++++.|....+...+. +.+ ... ...+|+|+
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvi 259 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEE-----KLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAM 259 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHH-----HHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHH-----HHHHHHHhCCCEEEeccchHHHHHHHHhCCCCCcEEE
Confidence 466899999986 2444444442 36888887653 3466666665433221110 000 011 23799999
Q ss_pred eccccccccCChHH--HHHHHHHhccCCeEEEEEE
Q 008262 344 CSRCRINWTRDDGI--LLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 344 ss~~l~hw~~d~~~--~L~ei~RvLKPGG~lv~st 376 (572)
-... . .. .+.++.++ +||.+++..
T Consensus 260 d~~G------~-~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 260 DFVG------S-QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp ESSC------C-HHHHHHGGGGEE--EEEEEEECC
T ss_pred ECCC------C-chHHHHHHHhhc--CCCEEEEEe
Confidence 5422 1 22 56666666 999998865
No 409
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=23.36 E-value=2e+02 Score=27.84 Aligned_cols=102 Identities=10% Similarity=0.030 Sum_probs=51.2
Q ss_pred CCEEEEECCCCc---hhHHHhccC--CeEEEeCCccch-HHHHHHHHHHcCCCcEEEeccccCCC-----C-----CCCC
Q 008262 275 IRVVMDAGCGVA---SFGAYLLPR--NVITMSIAPKDV-HENQIQFALERGAPAMVAAFATRRLP-----Y-----PSQA 338 (572)
Q Consensus 275 ~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp~dl-~~a~~~~A~~rg~~~~~~~~d~e~LP-----f-----p~~s 338 (572)
.+++|=.|++.| .++..|+++ +|+.++.+.... .+...+...+.+....+...|..+.. + .-+.
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 128 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGG 128 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 478899987766 345555555 677776653211 11112222333433333333332211 0 0136
Q ss_pred eeEEEeccccccccC-----ChH--------------HHHHHHHHhccCCeEEEEEE
Q 008262 339 FDLIHCSRCRINWTR-----DDG--------------ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 339 FDlI~ss~~l~hw~~-----d~~--------------~~L~ei~RvLKPGG~lv~st 376 (572)
.|+++.+........ +.+ .+++.+.+.++.+|.+++.+
T Consensus 129 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 788886654322111 111 34556667788889888763
No 410
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=22.96 E-value=1.5e+02 Score=28.13 Aligned_cols=99 Identities=13% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCCEEEEECCCCc---hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCC----------CCCC
Q 008262 274 HIRVVMDAGCGVA---SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY----------PSQA 338 (572)
Q Consensus 274 ~~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPf----------p~~s 338 (572)
..+++|=.|++.| .++..|+++ +|+.++.++..+.+. +.+.+........|..+..- .-+.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI----REEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4578999998776 355556555 788888776443222 22222233333333322110 0136
Q ss_pred eeEEEeccccccccC----ChH--------------HHHHHHHHhccCCeEEEEEE
Q 008262 339 FDLIHCSRCRINWTR----DDG--------------ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 339 FDlI~ss~~l~hw~~----d~~--------------~~L~ei~RvLKPGG~lv~st 376 (572)
.|+++.+........ +.+ .+.+.+.+.++.+|.++..+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 899887654322111 111 23455566677788887763
No 411
>1dev_B SMAD anchor for receptor activation; beta sheet, three-helix bundle, signaling protein; 2.20A {Homo sapiens} SCOP: j.64.1.1 PDB: 1mk2_B
Probab=22.79 E-value=18 Score=25.30 Aligned_cols=32 Identities=31% Similarity=0.379 Sum_probs=20.0
Q ss_pred CCCCCCcccccccccccCCCCCCCCCCCCCCC
Q 008262 58 SPNLNKSFDISSLISQNQSLASPYIVPSPAPV 89 (572)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (572)
+||-|....--|+|++-|+.+.......|||+
T Consensus 3 ~PNPNnPmEYCStiPP~qQ~~~s~~~~~ppps 34 (41)
T 1dev_B 3 SPNPNNPAEYCSTIPPLQQAQASGALSSPPPT 34 (41)
T ss_dssp CCCTTCGGGTCBCSCHHHHHTTTCTTSSCCCE
T ss_pred CCCCCCcchhhccCCcHHHHhhccCCCCCCCe
Confidence 56777777778889888766554333333333
No 412
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=22.70 E-value=60 Score=32.83 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=28.9
Q ss_pred CCeeEEEeccc----ccccc--CChH----HHHHHHHHhccCCeEEEEEEC
Q 008262 337 QAFDLIHCSRC----RINWT--RDDG----ILLLEVNRMLRAGGYFAWAAQ 377 (572)
Q Consensus 337 ~sFDlI~ss~~----l~hw~--~d~~----~~L~ei~RvLKPGG~lv~st~ 377 (572)
+.+|+|+|... .+|+. .|.. .++.-+.++|+|||.|+.-..
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 67999998642 23322 3332 356778899999999999975
No 413
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=22.50 E-value=89 Score=28.90 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=21.9
Q ss_pred CCEEEEECCCCchhHHHhcc----CCeEEEeCC
Q 008262 275 IRVVMDAGCGVASFGAYLLP----RNVITMSIA 303 (572)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~----~~V~gvDiS 303 (572)
..-|||+|=|+|..-.+|.+ +.|+++|-.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~ 73 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERA 73 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESS
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEee
Confidence 45699999999976655554 489988864
No 414
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=22.21 E-value=3.4e+02 Score=28.47 Aligned_cols=94 Identities=14% Similarity=0.211 Sum_probs=54.0
Q ss_pred CCCEEEEECCCC-c-hhHHHhccC--CeEEEeCCccchHHHHHHHH------HHcCC-------C-cEEEeccccCCCCC
Q 008262 274 HIRVVMDAGCGV-A-SFGAYLLPR--NVITMSIAPKDVHENQIQFA------LERGA-------P-AMVAAFATRRLPYP 335 (572)
Q Consensus 274 ~~~~VLDIGCGt-G-~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A------~~rg~-------~-~~~~~~d~e~LPfp 335 (572)
...+|.-||+|+ | .++..|+.. +|+.+|.++..+........ .+++. . ......+.+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~---- 111 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE---- 111 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGG----
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHH----
Confidence 346799999997 4 456666655 79999998865543322111 01110 0 0111222221
Q ss_pred CCCeeEEEeccccccccCCh---HHHHHHHHHhccCCeEEEEEE
Q 008262 336 SQAFDLIHCSRCRINWTRDD---GILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 336 ~~sFDlI~ss~~l~hw~~d~---~~~L~ei~RvLKPGG~lv~st 376 (572)
-...|+|+..-. ++. ..++.++...++||..++.++
T Consensus 112 ~~~aDlVIeaVp-----e~~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 112 LSTVDLVVEAVF-----EDMNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp GTTCSEEEECCC-----SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HCCCCEEEEcCC-----CCHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 135799996421 343 478888999999988776443
No 415
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=21.60 E-value=2.2e+02 Score=27.13 Aligned_cols=83 Identities=19% Similarity=0.081 Sum_probs=46.8
Q ss_pred EEEEECCCC-c-hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCCCCCCCeeEEEecccccccc
Q 008262 277 VVMDAGCGV-A-SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (572)
Q Consensus 277 ~VLDIGCGt-G-~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LPfp~~sFDlI~ss~~l~hw~ 352 (572)
+|.=||||. | .++..|.+. +|+++|.++..+ +.+.+.+..... ..+.+.+ ...|+|+..-- .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~-----~~~~~~g~~~~~-~~~~~~~----~~~D~vi~av~-~--- 67 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTC-----EKAVERQLVDEA-GQDLSLL----QTAKIIFLCTP-I--- 67 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH-----HHHHHTTSCSEE-ESCGGGG----TTCSEEEECSC-H---
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHhCCCCccc-cCCHHHh----CCCCEEEEECC-H---
Confidence 577789885 3 345555544 688888775432 223344543211 1122222 35799986522 1
Q ss_pred CChHHHHHHHHHhccCCeEEE
Q 008262 353 RDDGILLLEVNRMLRAGGYFA 373 (572)
Q Consensus 353 ~d~~~~L~ei~RvLKPGG~lv 373 (572)
.....++.++...+++|..++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 68 QLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEE
Confidence 123567788888888887653
No 416
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.57 E-value=2.2e+02 Score=26.97 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=21.2
Q ss_pred CCCEEEEECCCCc---hhHHHhccC--CeEEEeCC
Q 008262 274 HIRVVMDAGCGVA---SFGAYLLPR--NVITMSIA 303 (572)
Q Consensus 274 ~~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiS 303 (572)
..++||=.|++.| .++..|+++ +|+.+|.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 3578999998776 355556555 78888876
No 417
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=21.53 E-value=1.6e+02 Score=28.14 Aligned_cols=102 Identities=18% Similarity=0.159 Sum_probs=51.2
Q ss_pred CCEEEEECCCCc---hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccCCC-----C-----CCCCe
Q 008262 275 IRVVMDAGCGVA---SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-----Y-----PSQAF 339 (572)
Q Consensus 275 ~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~LP-----f-----p~~sF 339 (572)
.+++|=.|++.| .++..|+++ +|+.++-......+...+.....+........|..+.. + .-+..
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 106 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGV 106 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478898987766 344555544 56655433322222222223333444444444432211 0 01368
Q ss_pred eEEEeccccccccC----Ch---H-----------HHHHHHHHhccCCeEEEEEE
Q 008262 340 DLIHCSRCRINWTR----DD---G-----------ILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 340 DlI~ss~~l~hw~~----d~---~-----------~~L~ei~RvLKPGG~lv~st 376 (572)
|+++.+........ +. . .+++.+.+.++.+|.++..+
T Consensus 107 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 107 DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 98887654322110 10 1 34556777788888888764
No 418
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.88 E-value=1.4e+02 Score=25.11 Aligned_cols=89 Identities=9% Similarity=0.087 Sum_probs=45.8
Q ss_pred CEEEEECCCC-c-hhHHHhccC--CeEEEeCCccchHHHHHHHHHHcCCCcEEEeccccC---CC-CCCCCeeEEEeccc
Q 008262 276 RVVMDAGCGV-A-SFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR---LP-YPSQAFDLIHCSRC 347 (572)
Q Consensus 276 ~~VLDIGCGt-G-~~a~~L~~~--~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~d~e~---LP-fp~~sFDlI~ss~~ 347 (572)
.+|+=+|||. | .++..|.+. +|+++|.++..+ +.+.+.+... ...|..+ +. ..-..+|+|+....
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~-----~~~~~~~~~~--~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI-----ELLEDEGFDA--VIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH-----HHHHHTTCEE--EECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH-----HHHHHCCCcE--EECCCCCHHHHHhCCcccCCEEEEecC
Confidence 5689999864 3 234444443 899999876432 3334444322 2222221 11 12246898886422
Q ss_pred cccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 348 RINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 348 l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
..+....+....|.+. ...++...
T Consensus 80 ----~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 80 ----DDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp ----CHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred ----CHHHHHHHHHHHHHhC-CceEEEEE
Confidence 1111344555566666 66665554
No 419
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=20.73 E-value=2.2e+02 Score=27.20 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=18.4
Q ss_pred CCEEEEECCCCc---hhHHHhccC--CeEEEeCCc
Q 008262 275 IRVVMDAGCGVA---SFGAYLLPR--NVITMSIAP 304 (572)
Q Consensus 275 ~~~VLDIGCGtG---~~a~~L~~~--~V~gvDiSp 304 (572)
.+++|=.|++.| .++..|+++ +|+.++.+.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 63 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANS 63 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 467888887655 244444444 677777654
No 420
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.32 E-value=2.5e+02 Score=24.85 Aligned_cols=93 Identities=14% Similarity=0.028 Sum_probs=49.3
Q ss_pred CCEEEEECCCC-c-hhHHHhcc---CCeEEEeCCccchHHHHHHHHHHcCCCcEEEec-cccCCC-C-CCCCeeEEEecc
Q 008262 275 IRVVMDAGCGV-A-SFGAYLLP---RNVITMSIAPKDVHENQIQFALERGAPAMVAAF-ATRRLP-Y-PSQAFDLIHCSR 346 (572)
Q Consensus 275 ~~~VLDIGCGt-G-~~a~~L~~---~~V~gvDiSp~dl~~a~~~~A~~rg~~~~~~~~-d~e~LP-f-p~~sFDlI~ss~ 346 (572)
..+|+=+|||. | .++..|.+ .+|+++|.++... +.+.+.+........ +.+.+. . .-..+|+|+...
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~-----~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA-----QQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH-----HHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH-----HHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 45799999874 4 33444432 3799999876432 334445544332221 111111 1 124689988642
Q ss_pred ccccccCChHHHHHHHHHhccCCeEEEEEE
Q 008262 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (572)
Q Consensus 347 ~l~hw~~d~~~~L~ei~RvLKPGG~lv~st 376 (572)
. . ......+.+..+.+.|++.++...
T Consensus 114 ~--~--~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 114 P--H--HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp S--S--HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred C--C--hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 0 111234445667777888887765
Done!